Miyakogusa Predicted Gene
- Lj4g3v0151610.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0151610.2 tr|B9HRX4|B9HRX4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_804251 PE=4
SV=1,24.79,2e-18,seg,NULL; PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; HCP-like,NULL,CUFF.46539.2
(647 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 619 e-177
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 8e-70
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 8e-70
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 5e-67
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 238 8e-63
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 4e-61
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 2e-58
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 221 2e-57
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 3e-57
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 6e-56
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 211 1e-54
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 9e-52
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 3e-51
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 6e-51
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 6e-51
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 7e-51
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 7e-51
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 8e-51
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 9e-51
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 2e-50
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 4e-50
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 4e-50
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 5e-50
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 195 8e-50
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 195 9e-50
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 4e-49
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 7e-49
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 7e-49
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 8e-49
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 6e-48
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 189 6e-48
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 8e-48
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 188 9e-48
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 1e-47
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 1e-47
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 187 1e-47
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 6e-47
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 6e-44
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 1e-43
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 174 2e-43
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 4e-43
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 172 5e-43
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 4e-42
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 7e-42
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 6e-40
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 6e-40
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 6e-39
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 2e-38
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 157 2e-38
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 155 1e-37
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 7e-37
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 1e-35
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 142 9e-34
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 6e-33
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 9e-33
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 5e-32
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 135 6e-32
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 135 1e-31
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 129 9e-30
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 1e-29
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 2e-29
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 127 3e-29
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 6e-29
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 117 2e-26
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 116 5e-26
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 8e-25
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 110 3e-24
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 108 2e-23
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 105 1e-22
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 101 2e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 100 3e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 100 3e-21
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 100 4e-21
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 97 3e-20
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 97 5e-20
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 8e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 92 1e-18
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 92 1e-18
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 91 2e-18
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 91 3e-18
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 91 3e-18
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 90 5e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 90 6e-18
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 90 6e-18
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 88 2e-17
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 85 2e-16
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 84 2e-16
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 84 4e-16
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 83 8e-16
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 77 3e-14
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 77 3e-14
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 77 5e-14
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-13
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 75 1e-13
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 75 2e-13
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 74 3e-13
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 74 3e-13
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 73 6e-13
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 72 1e-12
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 71 3e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 70 7e-12
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 69 9e-12
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 68 2e-11
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 68 2e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 66 6e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 66 7e-11
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 65 1e-10
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 65 2e-10
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 63 8e-10
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 59 8e-09
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 59 1e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 59 1e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 59 1e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 57 3e-08
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 53 9e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 52 9e-07
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 52 2e-06
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 50 5e-06
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 619 bits (1597), Expect = e-177, Method: Compositional matrix adjust.
Identities = 313/646 (48%), Positives = 434/646 (67%), Gaps = 18/646 (2%)
Query: 12 SIFFRAFHAGKRFSNPTAAAEDIIFRAICVHLKHRRWSALEQLSPKLTTFMVNRVVSEFH 71
S R FH K+FSNP EDI+F A+C++L+ RRW+ L Q S LT +++RV+ EF
Sbjct: 11 SFLVRCFHVAKKFSNPEP--EDILFSALCLNLRQRRWNTLHQFSSSLTNPLISRVLREFR 68
Query: 72 NSPHLALDFYNWV-----GMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEG--I 124
+SP LAL+FYNWV + +SC ++ +LV SR F +ALS+M NL++ EG +
Sbjct: 69 SSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKL 128
Query: 125 APLELLEALMDESYQHC---PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWN 181
+PL +L L+ SYQ C P VFD+LVRACTQ G +GAY+VI + R G VSVHA N
Sbjct: 129 SPLHVLSGLI-RSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALN 187
Query: 182 NFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKD 241
NF+ L+ VN+IDRFW++YK M S G+VENVNTFNL IY+ CKE ++ EA++V YRMLK
Sbjct: 188 NFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKC 247
Query: 242 GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 301
G +PNVVSFNM+IDGACKTG + AL+++ KM +M+GN V PN+V+YNS+INGFCK G L
Sbjct: 248 GVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRL 307
Query: 302 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 361
LAE + GDMVK+G + + RTY L+D Y R GS +E+LRLCDEM +GL N V+YNSI
Sbjct: 308 DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSI 367
Query: 362 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
+YWL+ GD+E A VL DM K++ D+++ AI+ GLCRNGY+ EA++ QI + L
Sbjct: 368 VYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKL 427
Query: 422 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 481
+ED N L+++ + GSM+ +GL D + T+IDG K G E+AL
Sbjct: 428 VEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALE 487
Query: 482 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSN 541
+Y+GMIKM++ NL IYNS +NGL K A+ +V+ + ++ D T+NTL++
Sbjct: 488 IYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAM---EIKDIVTYNTLLNESLK 544
Query: 542 SGQIDEAFGLTTEMKSLG--LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
+G ++EA + ++M+ S + VT+N +IN LCK G E+AKE++K M+ +G+ PD
Sbjct: 545 TGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDS 604
Query: 600 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
ITY TLIT F+K E+V+ LHDY+IL+GV P + Y +IV P L
Sbjct: 605 ITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/615 (28%), Positives = 319/615 (51%), Gaps = 14/615 (2%)
Query: 39 ICVHLKHRRWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCTL 98
IC LK + L +L V V+ N L F + +G FP+ H+S +L
Sbjct: 58 ICFSLKQGNNNVRNHL-IRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSL 116
Query: 99 ---LQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHC---PAVFDALVRAC 152
+ +LV S ++A S + +I + G++ LE++ +L D ++ +C +VFD L+R
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSL-DSTFSNCGSNDSVFDLLIRTY 175
Query: 153 TQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENV 212
Q A++ LR++G VS+ A N + LV + ++ W +Y+ + G NV
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 213 NTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKK 272
T N+ + ALCK+ ++ + T + ++ + G +P++V++N +I G ++ A ++M
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM-- 293
Query: 273 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 332
N M G P +YN++ING CK G A+EV +M+++G P TY +L+ +
Sbjct: 294 -NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
G + E+ ++ +M R + P++V ++S++ R G++++A + + + + PD
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
Y IL +G CR G ++ A+ L N++L+ D + N +L+ +CK M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 512
R L PD YT +IDG+CKLGN + A+ L+ M + + ++ YN+ ++G K+ D
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 513 VAKNL-VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 571
AK + D + K L +++ L++ + G + EAF + EM S + + N++I
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 572 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK--G 629
C++G + + ++ MI +G PDCI+Y TLI F ++ + + L M + G
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 630 VIPDQKTYDAIVTPF 644
++PD TY++I+ F
Sbjct: 653 LVPDVFTYNSILHGF 667
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 40/313 (12%)
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKG 202
++ L++ + G A ++ E+ +GC + V +N L L + + +L+
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M + T + I CK + A+ + +M + +VV++N ++DG K G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSY---------------------------------- 288
+D A ++ M + P +SY
Sbjct: 531 IDTAKEIWADM---VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 289 -NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
NS+I G+C+ G E L M+ GF P +Y TLI G+ R ++ ++ L +M
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 348 ER--GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
E GL P++ YNSIL+ R M+EA VL MI++ + PD+ +Y + G
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Query: 406 LTEALKLHNQILK 418
LTEA ++H+++L+
Sbjct: 708 LTEAFRIHDEMLQ 720
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 117/228 (51%), Gaps = 1/228 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
+EL + + ++ + ++ L+ +VG + A ++ ++ ++ L + +++ ++
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L + +R++ M S V N I C+ + + + +M+ +G P+
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
+S+N +I G + ++ A ++KKM G V P+ +YNSI++GFC++ + AE
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV-PDVFTYNSILHGFCRQNQMKEAEV 678
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN 354
VL M++ G P TY +I+G+ +L E+ R+ DEM++RG P+
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 179/631 (28%), Positives = 298/631 (47%), Gaps = 51/631 (8%)
Query: 24 FSNPTAAAEDIIF-RAICVHLKHRRWSALEQ-LSPKLTTFMVNR---VVSEFHNSPHLAL 78
+S A+ D F I +K RR L + L P F + V+ + L L
Sbjct: 46 YSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVL 105
Query: 79 DFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMD--- 135
DF++W +L S C ++ + V S+ A SL+ + + + + D
Sbjct: 106 DFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLV 165
Query: 136 ---ESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV-EVN 191
+ + P VFD + G A V ++ G ++SV + N +L+ L +
Sbjct: 166 YTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY 225
Query: 192 DIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFN 251
+++ G NV ++N+ I+ +C+ R+ EA ++ M G P+V+S++
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 252 MIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 311
+++G C+ G LD KV K + +M + PNS Y SII C+ L AEE +M
Sbjct: 286 TVVNGYCRFGELD---KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 312 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 371
++ G P Y TLIDG+ + G + + + EM R + P+++ Y +I+ + GDM
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 372 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
EA K+ +M K + PD ++ L G C+ G++ +A ++HN
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH---------------- 446
Query: 432 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 491
MI G P+V T T+IDG CK G+ + A L + M K+
Sbjct: 447 -------------------MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 492 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 550
QPN+ YNS +NGLCK + + A LV E L D T+ TL+ Y SG++D+A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 551 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 610
+ EM GL VT+N L+N C +G E+ ++L+ M+ +GI P+ T+ +L+ +
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 611 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+++ + A++ M +GV PD KTY+ +V
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 172/383 (44%), Gaps = 38/383 (9%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
V+ L+ + G A E+ +R V + +S ++ D+ +L+ M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G + TF I CK + +A V M++ G PNVV++ +IDG CK G L
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
D A +++ +M + + PN +YNSI+NG CK G + A +++G+ AG TY
Sbjct: 473 DSANELLHEMWKI---GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
TL+D Y + G ++++ + EM+ +GL P IV +N ++ HG +E+ K+L+ M+
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
K I P+ ++ L + C L A ++
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYK----------------------------- 620
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
M +RG+ PD T ++ G+CK N ++A L+ M +++ Y+ I
Sbjct: 621 ------DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 504 GLCKMASTDVAKNLVDELRKRKL 526
G K A+ + D++R+ L
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGL 697
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 35/292 (11%)
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE-ALKLHNQ 415
V++ L G + EA +V M++ + S + L ++ Y T A+ + +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+ + + S NI+++++C+ M +G PDV + +TV++G C+ G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTL 535
+K +L M + +PN IY S I LC++ KL +A
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC---------------KLAEA------ 335
Query: 536 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 595
+EAF +EM G+ + V Y TLI+ CK G A + M + I
Sbjct: 336 ----------EEAF---SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 596 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
PD +TYT +I+ F + E L M KG+ PD T+ ++ + A
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 179/631 (28%), Positives = 298/631 (47%), Gaps = 51/631 (8%)
Query: 24 FSNPTAAAEDIIF-RAICVHLKHRRWSALEQ-LSPKLTTFMVNR---VVSEFHNSPHLAL 78
+S A+ D F I +K RR L + L P F + V+ + L L
Sbjct: 46 YSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVL 105
Query: 79 DFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMD--- 135
DF++W +L S C ++ + V S+ A SL+ + + + + D
Sbjct: 106 DFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLV 165
Query: 136 ---ESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV-EVN 191
+ + P VFD + G A V ++ G ++SV + N +L+ L +
Sbjct: 166 YTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY 225
Query: 192 DIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFN 251
+++ G NV ++N+ I+ +C+ R+ EA ++ M G P+V+S++
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 252 MIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 311
+++G C+ G LD KV K + +M + PNS Y SII C+ L AEE +M
Sbjct: 286 TVVNGYCRFGELD---KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 312 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 371
++ G P Y TLIDG+ + G + + + EM R + P+++ Y +I+ + GDM
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 372 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
EA K+ +M K + PD ++ L G C+ G++ +A ++HN
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH---------------- 446
Query: 432 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 491
MI G P+V T T+IDG CK G+ + A L + M K+
Sbjct: 447 -------------------MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 492 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 550
QPN+ YNS +NGLCK + + A LV E L D T+ TL+ Y SG++D+A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 551 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 610
+ EM GL VT+N L+N C +G E+ ++L+ M+ +GI P+ T+ +L+ +
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 611 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+++ + A++ M +GV PD KTY+ +V
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 172/383 (44%), Gaps = 38/383 (9%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
V+ L+ + G A E+ +R V + +S ++ D+ +L+ M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G + TF I CK + +A V M++ G PNVV++ +IDG CK G L
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
D A +++ +M + + PN +YNSI+NG CK G + A +++G+ AG TY
Sbjct: 473 DSANELLHEMWKI---GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
TL+D Y + G ++++ + EM+ +GL P IV +N ++ HG +E+ K+L+ M+
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
K I P+ ++ L + C L A ++
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYK----------------------------- 620
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
M +RG+ PD T ++ G+CK N ++A L+ M +++ Y+ I
Sbjct: 621 ------DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 674
Query: 504 GLCKMASTDVAKNLVDELRKRKL 526
G K A+ + D++R+ L
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGL 697
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 35/292 (11%)
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE-ALKLHNQ 415
V++ L G + EA +V M++ + S + L ++ Y T A+ + +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+ + + S NI+++++C+ M +G PDV + +TV++G C+ G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTL 535
+K +L M + +PN IY S I LC++ KL +A
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC---------------KLAEA------ 335
Query: 536 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 595
+EAF +EM G+ + V Y TLI+ CK G A + M + I
Sbjct: 336 ----------EEAF---SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 596 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
PD +TYT +I+ F + E L M KG+ PD T+ ++ + A
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 160/586 (27%), Positives = 284/586 (48%), Gaps = 11/586 (1%)
Query: 25 SNPTAAAEDIIFRAICVHLKHRRWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWV 84
S P + I + ++ +W +E ++ KLT +V+ + +P+LA +F N +
Sbjct: 36 STPESVLPPITSEILLESIRSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHI 95
Query: 85 GMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALM---DESYQHC 141
L+ + C + V+ L++ ++ + L + L+ D
Sbjct: 96 D-LYRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKS 154
Query: 142 PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYK 201
+FD LVR C Q+ + A + ++ +G N+ L+ L +N I+ W Y
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
M NV TFN+ I LCKE ++ +A + M G P +V++N ++ G G
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 262 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 321
++ A ++ +M P+ +YN I++ C +G A EVL +M + G P
Sbjct: 275 RIEGARLIISEMK---SKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSV 328
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
+Y LI G + G LE + DEMV++G+ P YN++++ L+ +E A ++ ++
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 441
+K I D +Y IL G C++G +A LH++++ + F+ L+ +C+
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448
Query: 442 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 501
++ +G+ PD+ T++DG+C +GN ++A L M M P+ YN
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508
Query: 502 INGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
+ GLC + A+ L+ E+++R + D ++NTLISGYS G AF + EM SLG
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 561 SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
+ +TYN L+ L KN E A+EL++ M +GI P+ ++ ++I
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 214/428 (50%), Gaps = 7/428 (1%)
Query: 215 FNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
F+L + C+ V EAI Y M + G +P + N I+ + ++ A M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
M + N ++N +IN CK+G L A+ LG M G +P++ TY TL+ G++ G
Sbjct: 218 RM---EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
+E + + EM +G P++ YN IL W+ G AS+VL +M + + PD SY
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYN 331
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
IL G NG L A ++++K ++ ++ N L++ + + +
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G+ D T +I+G C+ G+ +KA L++ M+ QP Y S I LC+ T A
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 515 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
L +++ + + D NTL+ G+ G +D AF L EM + ++ + VTYN L+
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
LC G EEA+ELM M +GI+PD I+Y TLI+ ++KK + + D M+ G P
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPT 571
Query: 634 QKTYDAIV 641
TY+A++
Sbjct: 572 LLTYNALL 579
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 182/398 (45%), Gaps = 42/398 (10%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
++ LV+ + G EGA +I E++++G + +N LS + + R + + M
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLREMK 319
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G V + ++N+ I + A M+K G P ++N +I G ++
Sbjct: 320 EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A +++++ + +SV+YN +ING+C+ G A + +M+ G +P+ TY
Sbjct: 380 AAEILIREIR---EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
+LI R E+ L +++V +G+ P++V+ N+++ G+M+ A +L +M
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
I PD +Y L GLC G EA +L
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEAREL-------------------------------- 524
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
G M RG+ PD + T+I G K G+T+ A + + M+ + P L YN+ + G
Sbjct: 525 ---MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKG 581
Query: 505 LCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSN 541
L K ++A+ L+ E++ ++ + ++F ++I SN
Sbjct: 582 LSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 177/435 (40%), Gaps = 77/435 (17%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+ + F++++ C+ +D A++ LM +P + + N I+ + + A
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFY---LMKEKGFYPKTETCNHILTLLSRLNRIENAW 210
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
DM + + +V T+ +I+ + G L+++ M G+ P IV YN+++
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
G +E A ++S+M K PD +Y + +C G +E L+ +I
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI--------- 321
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
GL PD + +I G G+ E A +
Sbjct: 322 -----------------------------GLVPDSVSYNILIRGCSNNGDLEMAFAYRDE 352
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQ 544
M+K P YN+ I+GL + A+ L+ E+R++ + LD+ T+N LI+GY G
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL------------------ 586
+AF L EM + G+ + TY +LI +LC+ EA EL
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 587 -----------------MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
+K M M I PD +TY L+ + EE L M +G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 630 VIPDQKTYDAIVTPF 644
+ PD +Y+ +++ +
Sbjct: 533 IKPDHISYNTLISGY 547
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAF 549
E + +++ + C++ D A ++++ T T N +++ S +I+ A+
Sbjct: 151 ETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAW 210
Query: 550 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
+M + + +N T+N +IN+LCK G ++AK + +M + GI+P +TY TL+ F
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ + E + M KG PD +TY+ I++
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 161/605 (26%), Positives = 279/605 (46%), Gaps = 50/605 (8%)
Query: 46 RRWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGMLFPH---SLHSSCTLLQVL 102
R L LS T + ++ + N L L F NW PH +L C L +L
Sbjct: 34 RHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWAN---PHQFFTLRCKCITLHIL 90
Query: 103 VNSRWFTEALSLMRNLIAKE-GIAPLELLEALMDESYQHC---PAVFDALVRACTQVGAT 158
+ + A L ++ AK L+ + E+Y C +VFD +V++ +++
Sbjct: 91 TKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLI 150
Query: 159 EGAYDVICELRTRGCLVSVHAWNNFLSHLVEVN-DIDRFWRLYKGMGSFGHVENVNTFNL 217
+ A ++ + G + V ++N L + +I ++K M NV T+N+
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
I C + A+T+ +M G PNVV++N +IDG CK +D K+++ M L
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL-- 268
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
+ PN +SYN +ING C++G + VL +M + G+ TY TLI GY + G+
Sbjct: 269 -KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
++L + EM+ GL P+++ Y S+++ + + G+M A + L M + +CP++ +Y L
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
+G + GY+ EA ++ + M G
Sbjct: 388 DGFSQKGYMNEAYRVLRE-----------------------------------MNDNGFS 412
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
P V T +I+G+C G E A+ + M + P++ Y++ ++G C+ D A +
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 518 VDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
E+ ++ + D T+++LI G+ + EA L EM +GL + TY LIN C
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
G E+A +L M+ +G+ PD +TY+ LI NK+ E L + + +P T
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 637 YDAIV 641
Y ++
Sbjct: 593 YHTLI 597
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/521 (29%), Positives = 257/521 (49%), Gaps = 28/521 (5%)
Query: 116 RNLIAKEGIAPLELLEALMDESYQHCPAVF--DALVRACTQVGATEGAYDVICELRTRGC 173
RN+ E + E+LE+ Q P VF + L+R G + A + ++ T+GC
Sbjct: 184 RNISFAENVFK-EMLES------QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGC 236
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
L +V +N + ++ ID ++L + M G N+ ++N+ I LC+E R+ E
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
V+ M + G + V++N +I G CK G+ AL VM L G + P+ ++Y S+I+
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRHG--LTPSVITYTSLIH 353
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
CK G + A E L M G P+ RTY TL+DG+++ G + E+ R+ EM + G P
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
++V YN+++ G ME+A VL DM +K + PD SY+ + G CR+ + EAL++
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
++++ + D + + L+ C+ M+ GLPPD +T +I+ C
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTF 532
G+ EKAL+L+N M++ P++ Y+ INGL K + T AK L+ +L + + T+
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 533 NTLISGYSN---------------SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 577
+TLI SN G + EA + M + YN +I+ C+
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 578 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
G +A L K M+ G +T L+ +K+ E+
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNEL 694
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 218/420 (51%), Gaps = 8/420 (1%)
Query: 230 EAITVIYRMLK---DGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
E +++++ L+ D + F++++ + +D AL ++ +L + P +
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIV---HLAQAHGFMPGVL 170
Query: 287 SYNSIINGFCK-KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
SYN++++ + K + AE V +M+++ P+V TY LI G+ G+++ +L L D+
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
M +G PN+V YN+++ + +++ K+L M K + P+ SY ++ GLCR G
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
+ E + ++ + D + N L+ CK M+ GL P V T +
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
+I CK GN +A+ + M PN Y + ++G + + A ++ E+
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 526 LLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
+ T+N LI+G+ +G++++A + +MK GLS + V+Y+T+++ C++ +EA
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+ + M+ +GI+PD ITY++LI F ++ +E L++ M+ G+ PD+ TY A++ +
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 161/607 (26%), Positives = 286/607 (47%), Gaps = 42/607 (6%)
Query: 76 LALDFYNWV----GMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLE 131
LAL F WV G+ H + C +LV +R + A +++ L G + +
Sbjct: 92 LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSF-VFG 150
Query: 132 ALMDESYQHC---PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
ALM +Y+ C P+V+D L+R + G + + ++ + G SV+ N L +V
Sbjct: 151 ALM-TTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 209
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ + W K M +V TFN+ I LC E ++ ++ +M K G P +V
Sbjct: 210 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 269
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNL--------------------------------M 276
++N ++ CK G A++++ M M
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
+ PN V+YN++INGF +G +L+A ++L +M+ G P+ T+ LIDG+ G+
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
+E+L++ M +GL P+ V Y +L L ++ + + A M +C + +Y +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 456
+GLC+NG+L EA+ L N++ K + D + + L+N CK + GL
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 516
P+ +T+I C++G ++A+R+Y MI + +N + LCK A+
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 517 LVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
+ + +L T +F+ LI+GY NSG+ +AF + EM +G TY +L+ LC
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 635
K G EA++ +K + D + Y TL+T K + + ++L M+ + ++PD
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689
Query: 636 TYDAIVT 642
TY ++++
Sbjct: 690 TYTSLIS 696
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/554 (24%), Positives = 237/554 (42%), Gaps = 40/554 (7%)
Query: 125 APLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFL 184
A +ELL+ + + ++ L+ + Y ++ ++R R + +N +
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 185 SHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF 244
+ + +L M SFG N TFN I E EA+ + Y M G
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
P+ VS+ +++DG CK DLA +M N V ++Y +I+G CK G L A
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKR---NGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
+L +M K G +P + TY+ LI+G+ + G + + + + GL PN ++Y++++Y
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
R G ++EA ++ MI + D +++ +L LC+ G + EA + + ++ +
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 582
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG--------------- 469
S + L+N S M G P +T +++ G
Sbjct: 583 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 642
Query: 470 --------------------NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 509
CK GN KA+ L+ M++ P+ Y S I+GLC+
Sbjct: 643 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Query: 510 STDVAKNLVDELRKRK--LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
T +A E R L + + + G +GQ +M +LG + + VT
Sbjct: 703 KTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTT 762
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 627
N +I+ + G E+ +L+ M Q P+ TY L+ ++K+ L+ +IL
Sbjct: 763 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 822
Query: 628 KGVIPDQKTYDAIV 641
G++PD+ T ++V
Sbjct: 823 NGILPDKLTCHSLV 836
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 202/435 (46%), Gaps = 4/435 (0%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
N + +++ I +E + +++ + M G P+V + N I+ K+G + V
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE---DVSVW 218
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
+ M + P+ ++N +IN C +G + ++ M K+G+ P++ TY T++ Y
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
+ G + ++ L D M +G+ ++ YN +++ L R + + +L DM + I P++
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
+Y L G G + A +L N++L F L + + N L++
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M +GL P + ++DG CK + A Y M + Y I+GLCK
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 511 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
D A L++E+ K + D T++ LI+G+ G+ A + + +GLS N + Y+T
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
LI C+ GC +EA + + MI++G D T+ L+T K E M G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 630 VIPDQKTYDAIVTPF 644
++P+ ++D ++ +
Sbjct: 579 ILPNTVSFDCLINGY 593
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 215/481 (44%), Gaps = 44/481 (9%)
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
R+Y+ G N ++ IY C+ + EAI + M+ +G + +FN+++
Sbjct: 503 RIYR----VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
CK G + A + M+ MT + + PN+VS++ +ING+ G L A V +M K G
Sbjct: 559 CKAGKVAEAEEFMR---CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 615
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
P+ TY +L+ G + G L E+ + + + V+YN++L + + G++ +A +
Sbjct: 616 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI-LKFDLIEDAFSLNILLNYIC 436
+M+ + I PD Y+Y L GLCR G A+ + + +++ + ++ +
Sbjct: 676 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 735
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
K+ M G PD+ T +IDG ++G EK L M + PNLT
Sbjct: 736 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 795
Query: 497 IYN-----------------------------------SFINGLCKMASTDVAKNLVDEL 521
YN S + G+C+ ++ ++
Sbjct: 796 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 855
Query: 522 RKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
R + +D TFN LIS +G+I+ AF L M SLG+S ++ T + ++++L +N
Sbjct: 856 ICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRF 915
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
+E++ ++ M QGI P+ Y LI + + + + MI + P A+
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 641 V 641
V
Sbjct: 976 V 976
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 219/509 (43%), Gaps = 17/509 (3%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
FD L+ G A+ V E+ G + + + L L + + + K +
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
+ + +N + A+CK + +A+++ M++ P+ ++ +I G C+ G
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG----GLLLAEEVLGDMVKAGFEPSV 320
+A+ K+ GN V PN V Y ++G K G G+ E+ M G P +
Sbjct: 706 IAILFAKEAE-ARGN-VLPNKVMYTCFVDGMFKAGQWKAGIYFREQ----MDNLGHTPDI 759
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
T +IDGY+R G +E++ L EM + PN+ YN +L+ + D+ + +
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 819
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 440
+I I PD+ + L G+C + L LK+ + + D ++ N+L++ C +
Sbjct: 820 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Query: 441 XXXXXXXXGSMITRGLPPDVYT---KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
M + G+ D T +V++ N + + L + M K P
Sbjct: 880 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL---HEMSKQGISPESRK 936
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNT-LISGYSNSGQIDEAFGLTTEMK 556
Y INGLC++ A + +E+ K+ + ++ + G+ DEA L M
Sbjct: 937 YIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 996
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 616
+ L ++ TL++L CKNG EA EL +M G++ D ++Y LIT K
Sbjct: 997 KMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1056
Query: 617 EVIALHDYMILKGVIPDQKTYDAIVTPFL 645
L++ M G + + TY A++ L
Sbjct: 1057 LAFELYEEMKGDGFLANATTYKALIRGLL 1085
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 210/487 (43%), Gaps = 5/487 (1%)
Query: 122 EGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWN 181
EG+ + + + + + +L++ + G A + L V +N
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 657
Query: 182 NFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKD 241
L+ + + ++ + L+ M + + T+ I LC++ + V AI
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 717
Query: 242 G-TFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG 300
G PN V + +DG K G + ++M+ + G++ P+ V+ N++I+G+ + G
Sbjct: 718 GNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL-GHT--PDIVTTNAMIDGYSRMGK 774
Query: 301 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 360
+ ++L +M P++ TY L+ GY++ + S L ++ G+ P+ + +S
Sbjct: 775 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS 834
Query: 361 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 420
++ + +E K+L I + + D+Y++ +L C NG + A L +
Sbjct: 835 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 894
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 480
+ D + + +++ + ++ M +G+ P+ +I+G C++G+ + A
Sbjct: 895 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 954
Query: 481 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGY 539
+ MI P ++ + L K D A L+ + K KL+ +F TL+
Sbjct: 955 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLC 1014
Query: 540 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
+G + EA L M + GL + V+YN LI LC G A EL + M G +
Sbjct: 1015 CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANA 1074
Query: 600 ITYTTLI 606
TY LI
Sbjct: 1075 TTYKALI 1081
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/590 (25%), Positives = 272/590 (46%), Gaps = 46/590 (7%)
Query: 58 LTTFMVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLM 115
L V RV+ E P LA F+ W F HS+ S C + +L +R + +A S++
Sbjct: 106 LAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVL 165
Query: 116 RNLIAKEGIAPLELLEALMDESYQHCPA--VFDALVRACTQVGATEGAYDVICELRTRGC 173
+ ++ + A ++ + L P VFDAL +G E A +++
Sbjct: 166 KEMVLSK--ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRV 223
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
+ N L ++ D R +K M G V T+N+ I +CKE V A
Sbjct: 224 FPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARG 283
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
+ M G P+ V++N +IDG K G LD + ++M M P+ ++YN++IN
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE---PDVITYNALIN 340
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
FCK G L + E +M G +P+V +Y+TL+D + + G ++++++ +M GL P
Sbjct: 341 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
N +Y+Y L + C+ G L++A +L
Sbjct: 401 N-----------------------------------EYTYTSLIDANCKIGNLSDAFRLG 425
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
N++L+ + + + L++ +C + G M T G+ P++ + +I G K
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTF 532
N ++AL L N + +P+L +Y +FI GLC + + AK +++E+++ + ++ +
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
TL+ Y SG E L EMK L + VT+ LI+ LCKN +A + +
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 593 Q-GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
G++ + +T +I K + E L + M+ KG++PD+ Y +++
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 229/486 (47%), Gaps = 13/486 (2%)
Query: 113 SLMRNLIAKEGI--APLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVIC---E 167
++M + + KEG A L E + +++++ +VG + D +C E
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD---DTVCFFEE 322
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
++ C V +N ++ + + Y+ M G NV +++ + A CKE
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
+ +AI M + G PN ++ +ID CK G+L A ++ +M L G V N V+
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM-LQVG--VEWNVVT 439
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
Y ++I+G C + AEE+ G M AG P++ +Y LI G+ + +++ +L L +E+
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
RG+ P++++Y + ++ L +E A V+++M + I + Y L + ++G T
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATV 466
E L L +++ + D+ + +L++ +CK+ + GL + +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
IDG CK E A L+ M++ P+ T Y S ++G K + A L D++ + +
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 527 -LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
LD + +L+ G S+ Q+ +A EM G+ + V +++ + GC +EA E
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Query: 586 LMKMMI 591
L ++
Sbjct: 740 LQSYLM 745
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 1/296 (0%)
Query: 353 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 412
P V++++ L G +EEA + S M + P S L + G + +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 413 HNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 472
++ F+ NI+++ +CK M RGL PD T ++IDG K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 473 LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATT 531
+G + + + M M +P++ YN+ IN CK + E++ L + +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 532 FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI 591
++TL+ + G + +A +M+ +GL N TY +LI+ CK G +A L M+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 592 MQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
G+ + +TYT LI +E L M GVIP+ +Y+A++ F+ A
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 260/511 (50%), Gaps = 15/511 (2%)
Query: 135 DESYQHCPAVFDALVRA-CTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDI 193
+ +++ V + LV C +V A +V ++ +R ++ + + VN+I
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAA-----NVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 194 DRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMI 253
D L + M G V N + I++L K RV EA+ ++ M G P+ +FN +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 254 IDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 313
I G CK ++ A K++ +M L+ G + P+ ++Y ++NG CK G + A+++ + K
Sbjct: 294 ILGLCKFDRINEAAKMVNRM-LIRGFA--PDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 314 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSILYWLYRHGDME 372
P + + TLI G+ G L+++ + +MV G+ P++ YNS++Y ++ G +
Sbjct: 351 ----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
A +VL DM +K P+ YSY IL +G C+ G + EA + N++ L + N L+
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
+ CK M +G PDVYT ++I G C++ + AL L MI
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKLLDATTFNTLISGYSNSGQIDEAFGL 551
N YN+ IN + A+ LV+E+ + LD T+N+LI G +G++D+A L
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 552 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 611
+M G + + ++ N LIN LC++G EEA E K M+++G PD +T+ +LI +
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 612 KHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
E+ + + + +G+ PD T++ +++
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 253/528 (47%), Gaps = 22/528 (4%)
Query: 80 FYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQ 139
FY+ + P +L + +++ ALSL+R++ K G P ++ + S
Sbjct: 205 FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM-TKHGCVPNSVIYQTLIHSLS 263
Query: 140 HCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRL 199
C V +AL ++ E+ GC+ +N+ + L + + I+ ++
Sbjct: 264 KCNRVNEAL--------------QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 200 YKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACK 259
M G + T+ + LCK RV A + YR+ K P +V FN +I G
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVT 365
Query: 260 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 319
G LD A V+ M +T + P+ +YNS+I G+ K+G + LA EVL DM G +P+
Sbjct: 366 HGRLDDAKAVLSDM--VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
V +Y L+DG+ + G ++E+ + +EM GL PN V +N ++ + + EA ++
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
+M K PD Y++ L GLC + AL L ++ ++ + + N L+N +
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
M+ +G P D T ++I G C+ G +KA L+ M++ P+ N
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 500 SFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
INGLC+ + A E+ R D TFN+LI+G +G+I++ + ++++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
G+ + VT+NTL++ LCK G +A L+ I G P+ T++ L+
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 248/503 (49%), Gaps = 9/503 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
F +++A V + A ++ ++ GC+ + + + L + N ++ +L + M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G V + TFN I LCK R+ EA ++ RML G P+ +++ +++G CK G +D
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA-GFEPSVRTY 323
A + ++ P V +N++I+GF G L A+ VL DMV + G P V TY
Sbjct: 340 AAKDLFYRIP-------KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 392
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
+LI GY + G + +L + +M +G PN+ Y ++ + G ++EA VL++M
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ P+ + L C+ + EA+++ ++ + D ++ N L++ +C+
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
MI+ G+ + T T+I+ + G ++A +L N M+ + YNS I
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 504 GLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
GLC+ D A++L ++ LR + N LI+G SG ++EA EM G +
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
+ VT+N+LIN LC+ G E+ + + + +GI PD +T+ TL++ K + L
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 623 DYMILKGVIPDQKTYDAIVTPFL 645
D I G +P+ +T+ ++ +
Sbjct: 693 DEGIEDGFVPNHRTWSILLQSII 715
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 161/344 (46%), Gaps = 40/344 (11%)
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
S+G V +V T+N IY KE V A+ V++ M G PNV S+ +++DG CK G +D
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKID 441
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A V+ N M+ + + PN+V +N +I+ FCK+ + A E+ +M + G +P V T+
Sbjct: 442 EAYNVL---NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI-- 382
+LI G ++ +L L +M+ G+ N V YN+++ R G+++EA K++++M+
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 383 ----------------------------------DKHICPDQYSYAILTEGLCRNGYLTE 408
D H P S IL GLCR+G + E
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH-APSNISCNILINGLCRSGMVEE 617
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A++ +++ D + N L+N +C++ + G+PPD T T++
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 512
CK G A L + I+ PN ++ + + + D
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 176/372 (47%), Gaps = 14/372 (3%)
Query: 280 SVWPNSVSYNSI----INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
S P SYN + ++G C K +A V DM+ P++ T+ ++ +
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
++ +L L +M + G PN V+Y ++++ L + + EA ++L +M PD ++
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ GLC+ + EA K+ N++L D + L+N +CK + R
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK----IGRVDAAKDLFYRI 348
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMI-KMDEQPNLTIYNSFINGLCKMASTDVA 514
P++ T+I G G + A + + M+ P++ YNS I G K +A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 515 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
++ ++R + + ++ L+ G+ G+IDEA+ + EM + GL N V +N LI+
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
CK EA E+ + M +G +PD T+ +LI+ + + + L MI +GV+ +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 634 QKTYDAIVTPFL 645
TY+ ++ FL
Sbjct: 529 TVTYNTLINAFL 540
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 248/499 (49%), Gaps = 33/499 (6%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
S+ ++ LS + ++N D L + M + G N T+++ I C+ ++ A+ V+
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM---------------------- 273
+M+K G PN+V+ + +++G C + + A+ ++ +M
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 274 ----------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
+ M P+ V+Y ++NG CK+G LA +L M + EP V Y
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
T+IDG ++ ++++L L EM +G+ PN+V Y+S++ L +G +AS++LSDMI+
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ I PD ++++ L + + G L EA KL+++++K + + + L+N C
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
M+++ PDV T T+I G CK E+ + ++ M + N YN I
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 504 GLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
GL + D+A+ + E+ + + T+NTL+ G +G++++A + ++ +
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
TYN +I +CK G E+ +L + ++G++PD + Y T+I+ F +K EE AL
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 623 DYMILKGVIPDQKTYDAIV 641
M G +P+ Y+ ++
Sbjct: 560 KEMKEDGTLPNSGCYNTLI 578
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 213/428 (49%), Gaps = 33/428 (7%)
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
G+ N TFN I+ L + EA+ +I RM+ G P++V++ ++++G CK G DLA
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 267 LKVMKKM-----------------------------NL---MTGNSVWPNSVSYNSIING 294
++ KM NL M + PN V+Y+S+I+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 295 FCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN 354
C G A +L DM++ P V T++ LID + + G L E+ +L DEMV+R + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 355 IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN 414
IV Y+S++ H ++EA ++ M+ KH PD +Y L +G C+ + E +++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 415 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 474
++ + L+ + + NIL+ + ++ M++ G+PP++ T T++DG CK G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 475 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFN 533
EKA+ ++ + + +P + YN I G+CK + +L L + + D +N
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
T+ISG+ G +EA L EMK G N YNTLI ++G E + EL+K M
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 594 GIRPDCIT 601
G D T
Sbjct: 601 GFAGDAST 608
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 236/483 (48%), Gaps = 46/483 (9%)
Query: 196 FWR-LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
FWR + G S+ + E ++ L+ E ++ +A+ + M+K FP+++ F+ ++
Sbjct: 35 FWRRAFSGKTSYDYREKLSRNGLS------ELKLDDAVALFGEMVKSRPFPSIIEFSKLL 88
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
K D+ + + ++M + + N +Y+ +IN FC++ L LA VLG M+K
Sbjct: 89 SAIAKMNKFDVVISLGEQMQNL---GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL 145
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
G+EP++ T ++L++GY + E++ L D+M G PN V +N++++ L+ H EA
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ------------------- 415
++ M+ K PD +Y ++ GLC+ G A L N+
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 416 ILKFDLIEDAFSL----------------NILLNYICKSXXXXXXXXXXGSMITRGLPPD 459
+ K+ ++DA +L + L++ +C MI R + PD
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 460 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 519
V+T + +ID K G +A +LY+ M+K P++ Y+S ING C D AK + +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 520 -ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
+ K D T+NTLI G+ +++E + EM GL N VTYN LI L + G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 579 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 638
+ A+E+ K M+ G+ P+ +TY TL+ K E+ + + +Y+ + P TY+
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 639 AIV 641
++
Sbjct: 506 IMI 508
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 1/312 (0%)
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
L++++ L EMV+ FP+I+ ++ +L + + + + M + I + Y+Y+I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L CR L AL + +++K + +L+ LLN C S M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
P+ T T+I G +A+ L + M+ QP+L Y +NGLCK TD+A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 516 NLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
NL++++ + KL +NT+I G +D+A L EM++ G+ N VTY++LI+ L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C G +A L+ MI + I PD T++ LI F K+ E L+D M+ + + P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 635 KTYDAIVTPFLL 646
TY +++ F +
Sbjct: 362 VTYSSLINGFCM 373
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 143/291 (49%), Gaps = 3/291 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
F AL+ A + G A + E+ R S+ +++ ++ + +D ++++ M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
S +V T+N I CK RV E + V M + G N V++N++I G + G D
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
+A ++ K+M + V PN ++YN++++G CK G L A V + ++ EP++ TY
Sbjct: 449 MAQEIFKEM---VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
+I+G + G +E+ L + +G+ P++V YN+++ R G EEA + +M +
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
P+ Y L R+G + +L ++ DA ++ ++ N +
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 237/487 (48%), Gaps = 42/487 (8%)
Query: 181 NNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLK 240
NN L +V +++ ++ + M G+V ++ I C+ + +A ++ +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 241 DGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG 300
G P+V+++N++I G CK G ++ AL V+ +M SV P+ V+YN+I+ C G
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM------SVSPDVVTYNTILRSLCDSGK 219
Query: 301 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 360
L A EVL M++ P V TY LI+ R + +++L DEM +RG P++V YN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 361 ILYWLYRHGDMEEA-----------------------------------SKVLSDMIDKH 385
++ + + G ++EA K+L+DM+ K
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
P ++ IL LCR G L A+ + ++ + ++ S N LL+ CK
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 505
M++RG PD+ T T++ CK G E A+ + N + P L YN+ I+GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 506 CKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANR 564
K T A L+DE+R + L D T+++L+ G S G++DEA E + +G+ N
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 565 VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDY 624
VT+N+++ LCK+ + A + + MI +G +P+ +YT LI + +E + L +
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 625 MILKGVI 631
+ KG++
Sbjct: 580 LCNKGLM 586
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 220/443 (49%), Gaps = 8/443 (1%)
Query: 200 YKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACK 259
Y + S +E+V + N + + + + E + M+ G P+++ +I G C+
Sbjct: 91 YSSVNSSFALEDVESNN-HLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 260 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 319
G A K+++ ++ G+ P+ ++YN +I+G+CK G + A VL M P
Sbjct: 150 LGKTRKAAKILE---ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPD 203
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
V TY T++ G L++++ + D M++R +P+++ Y ++ R + A K+L
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
+M D+ PD +Y +L G+C+ G L EA+K N + + + NI+L +C +
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
M+ +G P V T +I+ C+ G +A+ + M + QPN YN
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 500 SFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
++G CK D A ++ + R D T+NT+++ G++++A + ++ S
Sbjct: 384 PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
G S +TYNT+I+ L K G +A +L+ M + ++PD ITY++L+ +++ +E
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 619 IALHDYMILKGVIPDQKTYDAIV 641
I G+ P+ T+++I+
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIM 526
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 185/358 (51%), Gaps = 3/358 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
+E+L+ ++ + L+ A + A ++ E+R RGC V +N ++
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
+ + +D + M S G NV T N+ + ++C R ++A ++ ML+ G P+
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
VV+FN++I+ C+ G L A+ +++K M + PNS+SYN +++GFCK+ + A E
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEK---MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
L MV G P + TY T++ + G +E+++ + +++ +G P ++ YN+++ L
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ G +A K+L +M K + PD +Y+ L GL R G + EA+K ++ + + +A
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
+ N ++ +CKS MI RG P+ + +I+G G ++AL L N
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 189/388 (48%), Gaps = 3/388 (0%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
++ ++R+ G + A +V+ + R C V + + + + +L M
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G +V T+N+ + +CKE R+ EAI + M G PNV++ N+I+ C TG
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
A K++ M L G S P+ V++N +IN C+KG L A ++L M + G +P+ +Y
Sbjct: 326 MDAEKLLADM-LRKGFS--PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
L+ G+ + ++ ++ + MV RG +P+IV YN++L L + G +E+A ++L+ +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
K P +Y + +GL + G +A+KL +++ DL D + + L+ + +
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
G+ P+ T +++ G CK T++A+ MI +PN T Y I
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 504 GLCKMASTDVAKNLVDELRKRKLLDATT 531
GL A L++EL + L+ ++
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 159/312 (50%), Gaps = 7/312 (2%)
Query: 117 NLIAKEGIAPLELLEALMDESYQHC-PAVF--DALVRACTQVGATEGAYDVICELRTRGC 173
N I KEG E ++ L D C P V + ++R+ G A ++ ++ +G
Sbjct: 282 NGICKEGRLD-EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
SV +N ++ L + R + + M G N ++N ++ CKE ++ AI
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
+ RM+ G +P++V++N ++ CK G ++ A++++ N ++ P ++YN++I+
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL---NQLSSKGCSPVLITYNTVID 457
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
G K G A ++L +M +P TY++L+ G +R G ++E+++ E G+ P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
N V +NSI+ L + + A L MI++ P++ SY IL EGL G EAL+L
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 414 NQILKFDLIEDA 425
N++ L++ +
Sbjct: 578 NELCNKGLMKKS 589
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 21/338 (6%)
Query: 314 AGFEPSVRTYATLIDGYA------RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
+G + + TL GY+ + S+ S L D V N+ L + R
Sbjct: 66 SGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALED-----------VESNNHLRQMVR 114
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
G++EE K L +M+ PD L G CR G +A K+ + + D +
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 428 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
N++++ CK+ M + PDV T T++ C G ++A+ + + M+
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQID 546
+ D P++ Y I C+ + A L+DE+R R D T+N L++G G++D
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 547 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
EA +M S G N +T+N ++ +C G +A++L+ M+ +G P +T+ LI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 607 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+K I + + M G P+ +Y+ ++ F
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 253/503 (50%), Gaps = 33/503 (6%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
S+ ++ LS + ++N D L + M + G N+ T+++ I C+ ++ A+ V+
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM---------------------- 273
+M+K G P++V+ N +++G C + A+ ++ +M
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 274 ----------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
+ M P+ V+Y ++NG CK+G + LA +L M + EP V Y
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
T+ID + ++ ++L L EM +G+ PN+V YNS++ L +G +AS++LSDMI+
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ I P+ +++ L + + G L EA KL+++++K + D F+ + L+N C
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
MI++ P+V T T+I G CK ++ + L+ M + N Y + I+
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 504 GLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
G + D A+ + ++ +L D T++ L+ G N+G+++ A + ++ +
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
+ TYN +I +CK G E+ +L + ++G++P+ +TYTT+++ F +K EE AL
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 623 DYMILKGVIPDQKTYDAIVTPFL 645
M +G +PD TY+ ++ L
Sbjct: 560 REMKEEGPLPDSGTYNTLIRAHL 582
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 245/520 (47%), Gaps = 8/520 (1%)
Query: 92 LHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELL----EALMDESYQHCPAVFDA 147
L + L +V SR F + + L A + +L+ E + + H +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
L+ + A V+ ++ G + N+ L+ N I L M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
+ + TFN I+ L + R EA+ ++ RM+ G P++V++ ++++G CK G +DLAL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
++KKM + P V YN+II+ C + A + +M G P+V TY +LI
Sbjct: 242 SLLKKME---QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
+G ++ RL +M+ER + PN+V +++++ + G + EA K+ +MI + I
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
PD ++Y+ L G C + L EA + ++ D + + N L+ CK+
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
M RGL + T T+I G + + A ++ M+ P++ Y+ ++GLC
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 508 MASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
+ A + + L++ K+ D T+N +I G +G++++ + L + G+ N VT
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
Y T+++ C+ G EEA L + M +G PD TY TLI
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 212/418 (50%), Gaps = 4/418 (0%)
Query: 225 ECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPN 284
+ ++ +A+ + M+K FP++V F+ ++ K DL + + ++M + + N
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL---GISHN 115
Query: 285 SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD 344
+Y+ +IN FC++ L LA VL M+K G+EP + T +L++G+ + +++ L
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
+MVE G P+ +N++++ L+RH EA ++ M+ K PD +Y I+ GLC+ G
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
+ AL L ++ + + N +++ +C M +G+ P+V T
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
++I C G A RL + MI+ PN+ +++ I+ K A+ L DE+ KR
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 525 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ D T+++LI+G+ ++DEA + M S N VTYNTLI CK +E
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
EL + M +G+ + +TYTTLI F + + + M+ GV+PD TY ++
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 214/437 (48%), Gaps = 8/437 (1%)
Query: 114 LMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGC 173
L R+ A E +A L++ ++ + Q + +V + G + A ++ ++
Sbjct: 196 LFRHNRASEAVA---LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
V +N + L +++ L+ M + G NV T+N I LC R +A
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
++ M++ PNVV+F+ +ID K G L A K+ +M S+ P+ +Y+S+IN
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM---IKRSIDPDIFTYSSLIN 369
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
GFC L A+ + M+ P+V TY TLI G+ + ++E + L EM +RGL
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
N V Y ++++ ++ + + A V M+ + PD +Y+IL +GLC NG + AL +
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
+ + + D ++ NI++ +CK+ S+ +G+ P+V T T++ G C+
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK-RKLLDATTF 532
G E+A L+ M + P+ YN+ I + + L+ E+R R + DA+T
Sbjct: 550 GLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 609
Query: 533 NTLISGYSNSGQIDEAF 549
L++ + G++D++F
Sbjct: 610 G-LVTNMLHDGRLDKSF 625
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 158/312 (50%), Gaps = 1/312 (0%)
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
L++++ L +MV+ FP+IV ++ +L + + + + M + I + Y+Y+I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L CR L+ AL + +++K D +LN LLN C G M+ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
PD +T T+I G + +A+ L + M+ QP+L Y +NGLCK D+A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 516 NLVDELRKRKLLDATT-FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
+L+ ++ + K+ +NT+I N +++A L TEM + G+ N VTYN+LI L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C G +A L+ MI + I P+ +T++ LI F K+ E L+D MI + + PD
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 635 KTYDAIVTPFLL 646
TY +++ F +
Sbjct: 362 FTYSSLINGFCM 373
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 1/253 (0%)
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
+Y Y ++ + L +A+ L ++K + LL+ I K
Sbjct: 46 RYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGE 105
Query: 450 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 509
M G+ ++YT + +I+ C+ AL + M+K+ +P++ NS +NG C
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 510 STDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 568
A +LV ++ + D+ TFNTLI G + EA L M G + VTY
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 569 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 628
++N LCK G + A L+K M I P + Y T+I + + + L M K
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 629 GVIPDQKTYDAIV 641
G+ P+ TY++++
Sbjct: 286 GIRPNVVTYNSLI 298
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 162/570 (28%), Positives = 273/570 (47%), Gaps = 27/570 (4%)
Query: 78 LDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSL-MRNLIAKEGIAPLELLEALMDE 136
+DFY+ +F ++ ++ VLV+S +F +A + MR + GI P +
Sbjct: 102 MDFYDCEPTVFSYN-----AIMSVLVDSGYFDQAHKVYMR--MRDRGITP---------D 145
Query: 137 SYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRF 196
Y F +++ + A ++ + ++GC ++V A+ + E N
Sbjct: 146 VYS-----FTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 197 WRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDG 256
+ L+ M + G ++TFN + LCK+ V E ++ +++K G PN+ ++N+ I G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 257 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 316
C+ G LD A++++ + P+ ++YN++I G CK AE LG MV G
Sbjct: 261 LCQRGELDGAVRMV---GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
EP TY TLI GY + G ++ + R+ + V G P+ Y S++ L G+ A
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 436
+ ++ + K I P+ Y L +GL G + EA +L N++ + LI + + NIL+N +C
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
K MI++G PD++T +I G E AL + + M+ P++
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 497 IYNSFINGLCKMAS-TDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM 555
YNS +NGLCK + DV + + K + TFN L+ ++DEA GL EM
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 556 KSLGLSANRVTYNTLINLLCKNGCDEEAKELM-KMMIMQGIRPDCITYTTLITHFNKKHH 614
K+ ++ + VT+ TLI+ CKNG + A L KM + TY +I F +K +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 615 PEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
L M+ + + PD TY +V F
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 258/544 (47%), Gaps = 10/544 (1%)
Query: 108 FTEALSLMRNLIAKEGI-APLELLEALMDESYQHC-----PAVFDALVRACTQVGATEGA 161
F LS R++I K G E +E ++ + ++ V+ ++ + G + A
Sbjct: 36 FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEA 95
Query: 162 YDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYA 221
+V + C +V ++N +S LV+ D+ ++Y M G +V +F + + +
Sbjct: 96 VNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKS 155
Query: 222 LCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSV 281
CK R A+ ++ M G NVV++ ++ G + ++ KM L +G S+
Sbjct: 156 FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM-LASGVSL 214
Query: 282 WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLR 341
++ +N ++ CKKG + E++L ++K G P++ TY I G + G L+ ++R
Sbjct: 215 CLST--FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 342 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 401
+ ++E+G P+++ YN+++Y L ++ +EA L M+++ + PD Y+Y L G C
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 402 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 461
+ G + A ++ + + D F+ L++ +C + +G+ P+V
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
T+I G G +A +L N M + P + +N +NGLCKM A LV +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 522 -RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
K D TFN LI GYS +++ A + M G+ + TYN+L+N LCK
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
E+ E K M+ +G P+ T+ L+ + +E + L + M K V PD T+ +
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 641 VTPF 644
+ F
Sbjct: 573 IDGF 576
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 249/524 (47%), Gaps = 6/524 (1%)
Query: 121 KEGIAPLELLEALMDE-SYQHCPAVFDALVRACTQVGATEGAYDVICELRTR-GCLVSVH 178
K+ + LE+ ++ E ++H + + +++ G E +V+ ++R G +
Sbjct: 18 KDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEG 77
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
+ + + + +++ M + V ++N + L +A V RM
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
G P+V SF + + CKT AL+++ N M+ N V+Y +++ GF ++
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLL---NNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
E+ G M+ +G + T+ L+ + G ++E +L D++++RG+ PN+ Y
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
N + L + G+++ A +++ +I++ PD +Y L GLC+N EA +++
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
L D+++ N L+ CK G + G PD +T ++IDG C G T +
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLIS 537
AL L+N + +PN+ +YN+ I GL A L +E+ ++ L+ + TFN L++
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 538 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 597
G G + +A GL M S G + T+N LI+ E A E++ +M+ G+ P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 598 DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
D TY +L+ K E+V+ + M+ KG P+ T++ ++
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/535 (24%), Positives = 241/535 (45%), Gaps = 43/535 (8%)
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
EL ++ C + F+ L+R + G + ++ ++ RG L ++ +N F+ L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 188 VEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNV 247
+ ++D R+ + G +V T+N IY LCK + EA + +M+ +G P+
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 248 VSFNMIIDGACKTGSLDLALKVMKK--------------------------------MNL 275
++N +I G CK G + LA +++ N
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
G + PN + YN++I G +G +L A ++ +M + G P V+T+ L++G + G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+ ++ L M+ +G FP+I +N +++ ME A ++L M+D + PD Y+Y
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L GLC+ + ++ + +++ + F+ NILL +C+ M +
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT----IYNSFINGLCKMAST 511
+ PD T T+IDG CK G+ + A L+ KM+E ++ YN I+ + +
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFR---KMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 512 DVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 570
+A+ L E+ R L D T+ ++ G+ +G ++ + EM G + T +
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV 678
Query: 571 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
IN LC EA ++ M+ +G+ P+ + I +KK + L D +
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEAV---NTICDVDKKEVAAPKLVLEDLL 730
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 137/302 (45%), Gaps = 32/302 (10%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
L++ ++ + Y F+ L+ + E A +++ + G V+ +N+ L+ L
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ + + YK M G N+ TFN+ + +LC+ ++ EA+ ++ M P+ V
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
+F +IDG CK G LD A + +KM V ++ +YN II+ F +K + +AE++
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKME--EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
+MV P TY ++DG+ + G++ + EM+E G P++ ++ L
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685
Query: 369 GDMEEASKVLSDMIDKHICPDQ------------------------------YSYAILTE 398
+ EA+ ++ M+ K + P+ Y+Y +L +
Sbjct: 686 DRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFD 745
Query: 399 GL 400
GL
Sbjct: 746 GL 747
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 255/516 (49%), Gaps = 33/516 (6%)
Query: 159 EGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLA 218
+ A D+ E+ L S+ +N LS + ++N D L + M + ++ ++N+
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM----- 273
I C+ ++ A+ V+ +M+K G P++V+ + +++G C + A+ ++ +M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 274 ---------------------------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
+ M P+ +Y +++NG CK+G + LA
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+L M K E V Y T+ID + ++ ++L L EM +G+ PN+V YNS++ L
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+G +AS++LSDMI++ I P+ +++ L + + G L EA KL+++++K + D F
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ + L+N C MI++ P+V T T+I G CK E+ + L+ M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 545
+ N YN+ I GL + D+A+ + ++ + D T++ L+ G G++
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
++A + ++ + + TYN +I +CK G E+ +L + ++G++P+ I YTT+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
I+ F +K EE AL M G +P+ TY+ ++
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 211/429 (49%), Gaps = 33/429 (7%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
N TFN I+ L + EA+ +I RM+ G P++ ++ +++G CK G +DLAL ++
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 271 KKM-----------------------------NLMT---GNSVWPNSVSYNSIINGFCKK 298
KKM NL T + PN V+YNS+I C
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
G A +L DM++ P+V T++ LID + + G L E+ +L DEM++R + P+I Y
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
+S++ H ++EA + MI K P+ +Y L +G C+ + E ++L ++ +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
L+ + + N L+ + ++ M++ G+PPD+ T + ++DG CK G EK
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLIS 537
AL ++ + K +P++ YN I G+CK + +L L + + + + T+IS
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 538 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 597
G+ G +EA L EMK G N TYNTLI ++G + EL+K M G
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
Query: 598 DCITYTTLI 606
D T + +I
Sbjct: 604 DASTISMVI 612
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 223/454 (49%), Gaps = 41/454 (9%)
Query: 225 ECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM-NLMTGNSVWP 283
+ ++ +A+ + M++ P++V FN ++ K DL + + ++M NL ++
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLY- 116
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
SYN +IN FC++ L LA VLG M+K G+EP + T ++L++GY + E++ L
Sbjct: 117 ---SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
D+M PN V +N++++ L+ H EA ++ M+ + PD ++Y + GLC+
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 404 GYLTEALKLHNQILK-------------------FDLIEDAFSL---------------- 428
G + AL L ++ K + + DA +L
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
N L+ +C MI R + P+V T + +ID K G +A +LY+ MIK
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVD-ELRKRKLLDATTFNTLISGYSNSGQIDE 547
P++ Y+S ING C D AK++ + + K + T+NTLI G+ + +++E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
L EM GL N VTYNTLI L + G + A+++ K M+ G+ PD ITY+ L+
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 608 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
K E+ + + +Y+ + PD TY+ ++
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 217/449 (48%), Gaps = 10/449 (2%)
Query: 132 ALMDE----SYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
AL+D+ YQ F+ L+ A +I + RGC + + ++ L
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 188 VEVNDIDRFWRLYKGMGSFGHVE-NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
+ DID L K M G +E +V + I ALC V +A+ + M G PN
Sbjct: 231 CKRGDIDLALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
VV++N +I C G A +++ M + PN V+++++I+ F K+G L+ AE+
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSD---MIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ +M+K +P + TY++LI+G+ L+E+ + + M+ + FPN+V YN+++
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ +EE ++ +M + + + +Y L +GL + G A K+ +++ + D
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ +ILL+ +CK + + PD+YT +I+G CK G E L+ +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 545
+PN+ IY + I+G C+ + A L E+++ L ++ T+NTLI G
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLL 574
+ L EM+S G + T + +IN+L
Sbjct: 587 AASAELIKEMRSCGFVGDASTISMVINML 615
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 204/419 (48%), Gaps = 7/419 (1%)
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
A E +A L++ ++ Q + +V + G + A ++ ++ V
Sbjct: 201 ASEAVA---LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+ + L +++ L+ M + G NV T+N I LC R +A ++ M+
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
+ PNVV+F+ +ID K G L A K+ +M S+ P+ +Y+S+INGFC
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM---IKRSIDPDIFTYSSLINGFCMHD 374
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
L A+ + M+ P+V TY TLI G+ + +EE + L EM +RGL N V YN
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
+++ L++ GD + A K+ M+ + PD +Y+IL +GLC+ G L +AL + + K
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 420 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
+ D ++ NI++ +CK+ S+ +G+ P+V T+I G C+ G E+A
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 480 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLIS 537
L+ M + PN YN+ I + + L+ E+R + DA+T + +I+
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 151/312 (48%), Gaps = 1/312 (0%)
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
L++++ L EMV+ P+IV +N +L + + + + M + I D YSY I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L CR L AL + +++K D +L+ LLN C M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
P+ T T+I G +A+ L + M+ QP+L Y + +NGLCK D+A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 516 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
+L+ ++ K K+ D + T+I N +++A L TEM + G+ N VTYN+LI L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C G +A L+ MI + I P+ +T++ LI F K+ E L+D MI + + PD
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 635 KTYDAIVTPFLL 646
TY +++ F +
Sbjct: 361 FTYSSLINGFCM 372
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 165/345 (47%), Gaps = 1/345 (0%)
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A ++ G+MV++ PS+ + L+ A+ + + L + M + ++ YN ++
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
R + A VL M+ PD + + L G C ++EA+ L +Q+ +
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
+ + N L++ + M+ RG PD++T TV++G CK G+ + AL L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 542
M K + ++ IY + I+ LC + + A NL E+ + + + T+N+LI N
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
G+ +A L ++M ++ N VT++ LI+ K G EA++L MI + I PD TY
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
++LI F +E + + MI K P+ TY+ ++ F A
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 150/552 (27%), Positives = 254/552 (46%), Gaps = 41/552 (7%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
LE+++ ++ + A +LV + G E A +++ + G ++ +N +
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L + L+ MG G N T+++ I C+ ++ A++ + M+ G +
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
V +N +I+G CK G + A M +M + P V+Y S++ G+C KG + A
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEM---INKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ +M G PS+ T+ TL+ G R G + ++++L +EM E + PN V YN ++
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC------------------------- 401
GDM +A + L +M +K I PD YSY L GLC
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 402 ----------RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
R G L EAL + ++++ + D +L++ K M
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 452 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 511
RGL PD ++ID K G+ ++A +++ MI PN Y + INGLCK
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 512 DVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL-GLSANRVTYNT 569
+ A+ L +++ + + T+ + + G++D + L GL AN TYN
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
LI C+ G EEA EL+ MI G+ PDCITYTT+I +++ ++ I L + M KG
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 630 VIPDQKTYDAIV 641
+ PD+ Y+ ++
Sbjct: 853 IRPDRVAYNTLI 864
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/607 (26%), Positives = 281/607 (46%), Gaps = 16/607 (2%)
Query: 46 RRWS---ALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQ 100
R W + E +S +L T V ++ + P L L F+N++G+ F HS S C L+
Sbjct: 53 RSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIH 112
Query: 101 VLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCP----AVFDALVRACTQVG 156
LV + F A SL++ L+ + + P ++ L Y+ C + FD L++ +
Sbjct: 113 ALVKANLFWPASSLLQTLLLRA-LKPSDVFNVLFS-CYEKCKLSSSSSFDLLIQHYVRSR 170
Query: 157 ATEGAYDVICELRTRGCLV-SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
V + T+ L+ V + L LV+ L+ M S G +V +
Sbjct: 171 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 230
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL 275
I +LC+ + A +I M G N+V +N++IDG CK + A+ + K +
Sbjct: 231 TGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL-- 288
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
G + P+ V+Y +++ G CK + E++ +M+ F PS ++L++G + G
Sbjct: 289 -AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+EE+L L +V+ G+ PN+ VYN+++ L + EA + M + P+ +Y+I
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L + CR G L AL +++ L + N L+N CK MI +
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
L P V T +++ G C G KALRLY+ M P++ + + ++GL + A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 516 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
L +E+ + + + T+N +I GY G + +AF EM G+ + +Y LI+ L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C G EAK + + + I YT L+ F ++ EE +++ M+ +GV D
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 635 KTYDAIV 641
Y ++
Sbjct: 648 VCYGVLI 654
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 238/473 (50%), Gaps = 10/473 (2%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
S A ++ + L + I+ L K + FG N+ +N I +LCK + EA +
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGN--SVWPNSVSYNSIIN 293
RM K G PN V+++++ID C+ G LD AL + +M + TG SV+P YNS+IN
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM-VDTGLKLSVYP----YNSLIN 445
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
G CK G + AE + +M+ EP+V TY +L+ GY G + ++LRL EM +G+ P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
+I + ++L L+R G + +A K+ ++M + ++ P++ +Y ++ EG C G +++A +
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
++ + ++ D +S L++ +C + + + ++ G C+
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTF 532
G E+AL + M++ +L Y I+G K + L+ E+ R L D +
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
++I S +G EAFG+ M + G N VTY +IN LCK G EA+ L M
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 593 QGIRPDCITYTTLITHFNKKH-HPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
P+ +TY + K ++ + LH+ ILKG++ + TY+ ++ F
Sbjct: 746 VSSVPNQVTYGCFLDILTKGEVDMQKAVELHN-AILKGLLANTATYNMLIRGF 797
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 199/442 (45%), Gaps = 4/442 (0%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
+ ++++ + + +L+ G A + E+ +G S++ + LS L
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
I +L+ M + N T+N+ I C+E + +A + M + G P+
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
S+ +I G C TG A KV L GN N + Y +++GFC++G L A V
Sbjct: 579 SYRPLIHGLCLTGQASEA-KVFVD-GLHKGNCEL-NEICYTGLLHGFCREGKLEEALSVC 635
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
+MV+ G + + Y LIDG + + L EM +RGL P+ V+Y S++ +
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
GD +EA + MI++ P++ +Y + GLC+ G++ EA L +++ + + +
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
L+ + K + I +GL + T +I G C+ G E+A L MI
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 547
P+ Y + IN LC+ A L + + ++ + D +NTLI G +G++ +
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 548 AFGLTTEMKSLGLSANRVTYNT 569
A L EM GL N T T
Sbjct: 876 ATELRNEMLRQGLIPNNKTSRT 897
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 159/342 (46%), Gaps = 9/342 (2%)
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
+ K P VRT + L+ G ++ ++ L ++MV G+ P++ +Y ++ L D
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 371 MEEASKVLSDM----IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ A ++++ M D +I P Y +L +GLC+ + EA+ + + DL D
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ L+ +CK M+ P +++++G K G E+AL L +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 545
+ PNL +YN+ I+ LCK A+ L D + K L + T++ LI + G++
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
D A EM GL + YN+LIN CK G A+ M MI + + P +TYT+L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
+ + K + + L+ M KG+ P T+ +++ A
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 262/564 (46%), Gaps = 57/564 (10%)
Query: 78 LDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDES 137
L F + F S+ + +L+VL +SR +A ++ +I + GI P +
Sbjct: 189 LSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMI-EHGIMPTVI-------- 239
Query: 138 YQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFW 197
F+ ++ +C + G E + E++ R S +N ++ + ++
Sbjct: 240 ------TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEAR 293
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
R + M G +FN I CK+ +A V ML G +P ++N+ I
Sbjct: 294 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
C G +D A +++ M P+ VSYN++++G+ K G + A + D+
Sbjct: 354 CDFGRIDDARELLSSM-------AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
PS+ TY TLIDG G+LE + RL +EM + +FP+++ Y +++ ++G++ A++V
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
+M+ K I PD Y+Y G R G +A +LH +++ D
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD----------------- 509
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
PD+ IDG CK+GN KA+ + ++ P+
Sbjct: 510 -----------------HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 498 YNSFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK 556
Y + I G + +A+NL DE LRKR T+ LI G++ +G++++AF +TEMK
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 616
G+ N +T+N L+ +CK G +EA + M +GI P+ +YT LI+ E
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE 672
Query: 617 EVIALHDYMILKGVIPDQKTYDAI 640
EV+ L+ M+ K + PD T+ A+
Sbjct: 673 EVVKLYKEMLDKEIEPDGYTHRAL 696
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 150/300 (50%), Gaps = 14/300 (4%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLY--- 200
++ L+ + G EGA + E+ T+ V + + V+ ++ +Y
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 470
Query: 201 --KGMGSFGHVENVNTF-NLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
KG+ G+ L + K R+ E + D P++ +N+ IDG
Sbjct: 471 LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVAT-----DHHAPDLTIYNVRIDGL 525
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
CK G+L A++ +K+ + + P+ V+Y ++I G+ + G +A + +M++
Sbjct: 526 CKVGNLVKAIEFQRKIFRV---GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
PSV TY LI G+A+ G LE++ + EM +RG+ PN++ +N++LY + + G+++EA +
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
L M ++ I P++YSY +L C E +KL+ ++L ++ D ++ L ++ K
Sbjct: 643 LCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 107/249 (42%), Gaps = 32/249 (12%)
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
NI+L + S +MI G+ P V T T++D K G+ E+ +++ M +
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 547
+ + + YN ING K + A+ ++R+ + +FN LI GY G D+
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM----------IMQG--- 594
A+G+T EM + G+ TYN I LC G ++A+EL+ M +M G
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIK 386
Query: 595 ------------------IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
I P +TY TLI + + E L + M + + PD T
Sbjct: 387 MGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 637 YDAIVTPFL 645
Y +V F+
Sbjct: 447 YTTLVKGFV 455
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 168/619 (27%), Positives = 279/619 (45%), Gaps = 55/619 (8%)
Query: 74 PHLALDFYNWVGMLFPHSLHSSCTL-----LQVLVNSRWFTEALSLMRNLIAKEGIAPLE 128
P + F+ W P + S L ++ L++ F +A SL+ + I + A L
Sbjct: 55 PETLVSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYI-RTSDASLS 113
Query: 129 LLEALMDESYQHCP----AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFL 184
L +L+ + P A+FD + A G A + ++ ++ N L
Sbjct: 114 LCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL 173
Query: 185 SHLVEVND---IDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML-- 239
LV I ++ M G NV TFN+ + C E ++ +A+ ++ RM+
Sbjct: 174 IGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE 233
Query: 240 ----------------------------------KDGTFPNVVSFNMIIDGACKTGSLDL 265
K+G PN V++N ++ G CK GSL
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 266 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 325
A ++++ LM +V P+ +YN +ING C G + E++ M +P V TY T
Sbjct: 294 AFQIVE---LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNT 350
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
LIDG G E+ +L ++M G+ N V +N L WL + E ++ + +++D H
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 386 -ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
PD +Y L + + G L+ AL++ ++ + + + +LN +L+ +CK
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
S RG D T T+I G + EKAL +++ M K+ P ++ +NS I G
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 505 LCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
LC T++A DEL + LL D +TFN++I GY G++++AF E +
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 623
T N L+N LCK G E+A +I + D +TY T+I+ F K +E L
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLS 649
Query: 624 YMILKGVIPDQKTYDAIVT 642
M KG+ PD+ TY++ ++
Sbjct: 650 EMEEKGLEPDRFTYNSFIS 668
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 221/446 (49%), Gaps = 4/446 (0%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
++ +++A ++ G +++ +++ G + + +NN + ++ + +++ + M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
+ ++ T+N+ I LC + E + ++ M P+VV++N +IDG + G
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG-- 359
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA-GFEPSVRT 322
L+L+ K M M + V N V++N + CK+ + ++V GF P + T
Sbjct: 360 -LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
Y TLI Y + G L +L + EM ++G+ N + N+IL L + ++EA +L+
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
+ D+ +Y L G R + +AL++ +++ K + + N L+ +C
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
+ GL PD T ++I G CK G EKA YN IK +P+ N +
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 503 NGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
NGLCK T+ A N + L + + +D T+NT+IS + ++ EA+ L +EM+ GL
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEP 658
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMK 588
+R TYN+ I+LL ++G E EL+K
Sbjct: 659 DRFTYNSFISLLMEDGKLSETDELLK 684
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 159/369 (43%), Gaps = 41/369 (11%)
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD---MEEA 374
PS + + Y G +L++ +M+ L PN++ N++L L R+ + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK-LHNQILKFDLIEDAFSLNILLN 433
+V DM+ + + ++ +L G C G L +AL L + +F + D + N +L
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 434 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 493
+ K M GL P+ T ++ G CKLG+ ++A ++ M + + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLT 552
+L YN INGLC S L+D ++ KL D T+NTLI G G EA L
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 553 TEMKSLGLSANRVT------------------------------------YNTLINLLCK 576
+M++ G+ AN+VT Y+TLI K
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
G A E+M+ M +GI+ + IT T++ K+ +E L + +G I D+ T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 637 YDAIVTPFL 645
Y ++ F
Sbjct: 489 YGTLIMGFF 497
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 256/516 (49%), Gaps = 5/516 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
+E+ E L C ++ ++ G + AY ++ R +G + SV A+N L+
Sbjct: 293 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L ++ +D ++++ M N++T+N+ I LC+ ++ A + M K G FPN
Sbjct: 353 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
V + N+++D CK+ LD A + ++M+ P+ +++ S+I+G K G + A +
Sbjct: 412 VRTVNIMVDRLCKSQKLDEACAMFEEMDYKV---CTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
V M+ + + Y +LI + G E+ ++ +M+ + P++ + N+ + ++
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ G+ E+ + ++ + PD SY+IL GL + G+ E +L + + + D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ NI+++ CK M T+G P V T +VIDG K+ ++A L+
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 545
+ N+ IY+S I+G K+ D A +++EL ++ L + T+N+L+ + +I
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
+EA MK L + N+VTY LIN LCK +A + M QG++P I+YTT+
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
I+ K + E AL D G +PD Y+A++
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/606 (24%), Positives = 262/606 (43%), Gaps = 57/606 (9%)
Query: 77 ALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALM 134
A++++ W PH S +LL V+ R F +AL + ++ G P
Sbjct: 81 AIEYFRWYERRTELPHCPESYNSLLLVMARCRNF-DALDQILGEMSVAGFGP-------- 131
Query: 135 DESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDID 194
S C +V C + YDV+ +R + A+ + VN D
Sbjct: 132 --SVNTCIE----MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSD 185
Query: 195 RFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
L++ M G+ V+ F I KE RV A++++ M ++V +N+ I
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI 245
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
D K G +D+A K ++ N + P+ V+Y S+I CK L A E+ + K
Sbjct: 246 DSFGKVGKVDMAWKFFHEIE---ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
P Y T+I GY G +E+ L + +G P+++ YN IL L + G ++EA
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
KV +M K P+ +Y IL + LCR G L A +L + + K L + ++NI+++
Sbjct: 363 LKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR 421
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ-- 492
+CKS M + PD T ++IDG K+G + A ++Y M+ D +
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN 481
Query: 493 ---------------------------------PNLTIYNSFINGLCKMASTDVAKNLVD 519
P+L + N++++ + K + + + +
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 520 ELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
E++ R+ + DA +++ LI G +G +E + L MK G + YN +I+ CK G
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 579 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 638
+A +L++ M +G P +TY ++I K +E L + K + + Y
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 639 AIVTPF 644
+++ F
Sbjct: 662 SLIDGF 667
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 178/384 (46%), Gaps = 5/384 (1%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
F +L+ +VG + AY V ++ C + + + + + + ++YK M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF-PNVVSFNMIIDGACKTGS 262
+ ++ N + + K E ++ +K F P+ S++++I G K G
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEP-EKGRAMFEEIKARRFVPDARSYSILIHGLIKAG- 566
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
A + + M ++ +YN +I+GFCK G + A ++L +M GFEP+V T
Sbjct: 567 --FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
Y ++IDG A+ L+E+ L +E + + N+V+Y+S++ + G ++EA +L +++
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
K + P+ Y++ L + L + + EAL + + + + IL+N +CK
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M +G+ P + T+I G K GN +A L++ P+ YN+ I
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 503 NGLCKMASTDVAKNLVDELRKRKL 526
GL A +L +E R+R L
Sbjct: 805 EGLSNGNRAMDAFSLFEETRRRGL 828
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 182/418 (43%), Gaps = 4/418 (0%)
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKEC 226
E+ + C + + + L +V +D +++Y+ M N + I
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
R + + M+ P++ N +D K G + + +++ P++
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK---ARRFVPDAR 553
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
SY+ +I+G K G E+ M + G R Y +IDG+ + G + ++ +L +EM
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
+G P +V Y S++ L + ++EA + + K I + Y+ L +G + G +
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
EA + ++++ L + ++ N LL+ + K+ SM P+ T +
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK- 525
I+G CK+ KA + M K +P+ Y + I+GL K + A L D +
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 526 LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ D+ +N +I G SN + +AF L E + GL + T L++ L KN C E+A
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 239/472 (50%), Gaps = 5/472 (1%)
Query: 172 GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEA 231
G H +N L+ LV+ N + + M +G +V+TFN+ I ALC+ ++ A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSI 291
I ++ M G P+ +F ++ G + G LD AL++ ++M + W N VS N I
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM--VEFGCSWSN-VSVNVI 265
Query: 292 INGFCKKGGLLLAEEVLGDMV-KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
++GFCK+G + A + +M + GF P T+ TL++G + G ++ ++ + D M++ G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
P++ YNS++ L + G+++EA +VL MI + P+ +Y L LC+ + EA
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 385
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
+L + ++ D + N L+ +C + M ++G PD +T +ID
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDA 529
C G ++AL + M ++ YN+ I+G CK T A+ + DE+ + ++
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 530 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 589
T+NTLI G S ++++A L +M G ++ TYN+L+ C+ G ++A ++++
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 590 MIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
M G PD +TY TLI+ K E L + +KG+ Y+ ++
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 230/471 (48%), Gaps = 12/471 (2%)
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+ L L D ++ + M S +TF + I + + E ++V+ M+
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 240 KD-GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVW---PNSVSYNSIINGF 295
+ G P+ +N +++ SL L KM SVW P+ ++N +I
Sbjct: 146 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKM------SVWGIKPDVSTFNVLIKAL 199
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
C+ L A +L DM G P +T+ T++ GY G L+ +LR+ ++MVE G +
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHN 414
V N I++ + G +E+A + +M ++ PDQY++ L GLC+ G++ A+++ +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 415 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 474
+L+ D ++ N +++ +CK MITR P+ T T+I CK
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 475 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFN 533
E+A L + P++ +NS I GLC + VA L +E+R + D T+N
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
LI + G++DEA + +M+ G + + +TYNTLI+ CK EA+E+ M +
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 594 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
G+ + +TY TLI K E+ L D MI++G PD+ TY++++T F
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 154/602 (25%), Positives = 290/602 (48%), Gaps = 42/602 (6%)
Query: 57 KLTTFMVNRVVSEFHNSPHLAL-DFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLM 115
K F +++ V+ H+S L L + + PHS S T +++L + R + + +
Sbjct: 8 KFYPFSISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAAL 67
Query: 116 R--NLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVI-------C 166
R NL +K+ ++ PA+++ ++ + G+ + ++ C
Sbjct: 68 RLFNLASKK-------------PNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRC 114
Query: 167 ELRTRGCLVSVHAWNNF--LSHLVEVND--IDRFWRLYKGMGSFGHVENVNTFNLAIYAL 222
E+ T L+ + ++ F ++ V D ID F G+ H N NL +
Sbjct: 115 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEF-----GLKPDTHFYN-RMLNLLVDG- 167
Query: 223 CKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVW 282
++VE +M G P+V +FN++I C+ L A+ +++ M +
Sbjct: 168 -NSLKLVEISHA--KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM---PSYGLV 221
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 342
P+ ++ +++ G+ ++G L A + MV+ G S + ++ G+ + G +E++L
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281
Query: 343 CDEMVER-GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 401
EM + G FP+ +N+++ L + G ++ A +++ M+ + PD Y+Y + GLC
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 402 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 461
+ G + EA+++ +Q++ D + + N L++ +CK + ++G+ PDV
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
T ++I G C N A+ L+ M +P+ YN I+ LC D A N++ ++
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 522 RKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
+ T+NTLI G+ + + EA + EM+ G+S N VTYNTLI+ LCK+
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
E+A +LM MIM+G +PD TY +L+THF + ++ + M G PD TY +
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 641 VT 642
++
Sbjct: 582 IS 583
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 176/403 (43%), Gaps = 38/403 (9%)
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 342
P Y I+ + G +++L DM + E T+ LI+ YA++ +E L +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 343 CDEMVER------------------------------------GLFPNIVVYNSILYWLY 366
D M++ G+ P++ +N ++ L
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
R + A +L DM + PD+ ++ + +G G L AL++ Q+++F
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
S+N++++ CK M + G PD YT T+++G CK G+ + A+ + +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQ 544
M++ P++ YNS I+GLCK+ A ++D++ R T T+NTLIS Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
++EA L + S G+ + T+N+LI LC A EL + M +G PD TY
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
LI K +E + + M L G TY+ ++ F A
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 20/337 (5%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVG 156
TL+ L EA L R L +K GI P C F++L++
Sbjct: 370 TLISTLCKENQVEEATELARVLTSK-GILP------------DVC--TFNSLIQGLCLTR 414
Query: 157 ATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFN 216
A ++ E+R++GC +N + L +D + K M G +V T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 217 LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
I CK + EA + M G N V++N +IDG CK+ ++ A ++M +M +M
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-IM 533
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
G P+ +YNS++ FC+ G + A +++ M G EP + TY TLI G + G +
Sbjct: 534 EGQK--PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP-DQYSYAI 395
E + +L + +G+ YN ++ L+R EA + +M++++ P D SY I
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 396 LTEGLCR-NGYLTEALKLHNQILKFDLIEDAFSLNIL 431
+ GLC G + EA+ ++L+ + + SL +L
Sbjct: 652 VFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 263/557 (47%), Gaps = 18/557 (3%)
Query: 28 TAAAEDIIFRAICVHLKHRRWSALEQL---SPKLTTFMVNRVVSEF-----HNSPHLALD 79
+A E +I ++IC + W + + S L + + +V+SE + P L+
Sbjct: 6 SANREALIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWS 65
Query: 80 FYNWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALM--- 134
F+ W L HSL SS ++ +L + F A L+ L +E ++ +L +L+
Sbjct: 66 FFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGV 125
Query: 135 DESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDID 194
E + VF L+ + G + V ++R+ G + A L+ LV+ D
Sbjct: 126 SEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTD 185
Query: 195 RFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
W+++K M G V N++ +N+ ++A K +A ++ M + G FP++ ++N +I
Sbjct: 186 TVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLI 245
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
CK AL V +M + V PN V+YNS I+GF ++G + A + + +K
Sbjct: 246 SVYCKKSMHFEALSVQDRME---RSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKD 301
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
+ TY TLIDGY R ++E+LRL + M RG P +V YNSIL L G + EA
Sbjct: 302 DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
+++L++M K I PD + L C+ + A+K+ ++++ L D +S L++
Sbjct: 362 NRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHG 421
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
CK SMI +G P T + ++DG ++ +L K +
Sbjct: 422 FCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD 481
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTT 553
+ +Y I +CK+ D AK L + + K+ L+ D+ F T+ Y +G++ EA L
Sbjct: 482 VALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFD 541
Query: 554 EMKSLGLSANRVTYNTL 570
M + L N Y ++
Sbjct: 542 VMYNRRLMVNLKLYKSI 558
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 179/375 (47%), Gaps = 12/375 (3%)
Query: 274 NLMTGNSVWPNSVSYN-SIINGFCKKGGLLLAEEVLGDMVKA-GFEPSVRTYATLIDGYA 331
+L+ G S P VS+ S + + K G++ V+ + +++ G +P ++ L++
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179
Query: 332 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 391
+ + ++ +MV+ G+ NI VYN +++ + GD E+A K+LS+M +K + PD +
Sbjct: 180 KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
+Y L C+ EAL + +++ + + + + N ++ + +
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMRE-----ATR 294
Query: 452 ITRGLPPDV----YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
+ R + DV T T+IDG C++ + ++ALRL M P + YNS + LC+
Sbjct: 295 LFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCE 354
Query: 508 MASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
A L+ E+ +K+ D T NTLI+ Y + A + +M GL + +
Sbjct: 355 DGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYS 414
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 626
Y LI+ CK E AKE + MI +G P TY+ L+ F ++ +E+ L +
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFE 474
Query: 627 LKGVIPDQKTYDAIV 641
+G+ D Y ++
Sbjct: 475 KRGLCADVALYRGLI 489
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%)
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
V++ ++ + + G + ++ V + + P + +L L + K+ ++
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 417 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 476
+K ++ + N+L++ KS M +G+ PD++T T+I CK
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 536
+AL + + M + PN+ YNSFI+G + A L E++ + T+ TLI
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLI 314
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
GY IDEA L M+S G S VTYN+++ LC++G EA L+ M + I
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
PD IT TLI + K + + MI G+ D +Y A++ F
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGF 422
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 239/504 (47%), Gaps = 68/504 (13%)
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
L S+ +N LS + ++ D L + M G N+ T+N+ I C+ ++ A+
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM-------------------- 273
++ +M+K G P++V+ + +++G C + A+ ++ +M
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 274 ------------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 321
+ M PN V+Y ++NG CK+G + LA +L M A E +V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
Y+T+ID ++ +++L L EM +G+ PN++ Y+S++ L + +AS++LSDM
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 441
I++ I P+ ++ L + + G L EA KL+++
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE-------------------------- 355
Query: 442 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 501
MI R + PD++T +++I+G C ++A ++ MI D PN+ YN+
Sbjct: 356 ---------MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 502 INGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
ING CK D L E+ +R L+ T T+ TLI G+ + D A + +M S G+
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 561 SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA 620
N +TYNTL++ LCKNG E+A + + + + P TY +I K E+
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 621 LHDYMILKGVIPDQKTYDAIVTPF 644
L + LKGV PD Y+ +++ F
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGF 550
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 205/407 (50%), Gaps = 10/407 (2%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L M G+ + TF I+ L + EA+ ++ RM++ G PN+V++ ++++G C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K G +DLA ++ KM + N V Y+++I+ CK A + +M G P
Sbjct: 237 KRGDIDLAFNLLNKME---AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 319 SVRTYATLID---GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 375
+V TY++LI Y RW ++ RL +M+ER + PN+V +N+++ + G + EA
Sbjct: 294 NVITYSSLISCLCNYERW---SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 376 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
K+ +MI + I PD ++Y+ L G C + L EA + ++ D + + N L+N
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 436 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 495
CK+ M RGL + T T+I G + + + A ++ M+ PN+
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 496 TIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTE 554
YN+ ++GLCK + A + + L++ K+ T+N +I G +G++++ + L
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
+ G+ + + YNT+I+ C+ G EEA L + M G PD T
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 212/413 (51%), Gaps = 4/413 (0%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
+AI + M+K P++ FN ++ K DL + + +KM + + N +YN
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL---GISHNLYTYN 124
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
+IN FC++ + LA +LG M+K G+EPS+ T ++L++GY + +++ L D+MVE
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G P+ + + ++++ L+ H EA ++ M+ + P+ +Y ++ GLC+ G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
L N++ + + + +++ +CK M +G+ P+V T +++I
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LD 528
C A RL + MI+ PN+ +N+ I+ K A+ L DE+ KR + D
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
T+++LI+G+ ++DEA + M S N VTYNTLIN CK +E EL +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
M +G+ + +TYTTLI F + + + M+ GV P+ TY+ ++
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 180/367 (49%), Gaps = 6/367 (1%)
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
A E +A L++ ++ Q + +V + G + A++++ ++ +V
Sbjct: 206 ASEAVA---LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
++ + L + D L+ M + G NV T++ I LC R +A ++ M+
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
+ PNVV+FN +ID K G L A K+ +M S+ P+ +Y+S+INGFC
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM---IKRSIDPDIFTYSSLINGFCMHD 379
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
L A+ + M+ P+V TY TLI+G+ + ++E + L EM +RGL N V Y
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
++++ ++ D + A V M+ + P+ +Y L +GLC+NG L +A+ + + +
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 420 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
+ ++ NI++ +CK+ S+ +G+ PDV T+I G C+ G E+A
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Query: 480 LRLYNGM 486
L+ M
Sbjct: 560 DALFRKM 566
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 187/395 (47%), Gaps = 3/395 (0%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
L++ +++ Y+ F L+ A ++ + RGC ++ + ++ L
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ DID + L M + NV ++ I +LCK +A+ + M G PNV+
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
+++ +I C A +++ M + PN V++N++I+ F K+G L+ AE++
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSD---MIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
+M+K +P + TY++LI+G+ L+E+ + + M+ + FPN+V YN+++ +
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
++E ++ +M + + + +Y L G + A + Q++ + + +
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
N LL+ +CK+ + + P +YT +I+G CK G E L+ +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
+P++ IYN+ I+G C+ + A L ++R+
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 139/325 (42%), Gaps = 36/325 (11%)
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
Y IL +++A + M+ P + + L + + + L ++
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
+ + + ++ NIL+N C+ G M+ G P + T +++++G C
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 478 KALRLYNGMIKMDE-----------------------------------QPNLTIYNSFI 502
A+ L + M++M QPNL Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 503 NGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
NGLCK D+A NL++++ K+ + ++T+I D+A L TEM++ G+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
N +TY++LI+ LC +A L+ MI + I P+ +T+ LI F K+ E L
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 622 HDYMILKGVIPDQKTYDAIVTPFLL 646
+D MI + + PD TY +++ F +
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCM 377
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/516 (24%), Positives = 255/516 (49%), Gaps = 33/516 (6%)
Query: 159 EGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLA 218
+ A D+ ++ S+ +N LS + ++N + L + M + G ++ T+++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM----- 273
I C+ ++ A+ V+ +M+K G P++V+ + +++G C + + A+ ++ +M
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 274 ---------------------------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
+ M P+ V+Y +++NG CK+G + LA
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+L M K E V Y T+IDG ++ ++++L L EM +G+ P++ Y+S++ L
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+G +AS++LSDMI++ I P+ +++ L + + G L EA KL+++++K + D F
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ + L+N C MI++ P+V T +T+I G CK E+ + L+ M
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQI 545
+ N Y + I+G + D A+ + ++ + + T+N L+ G +G++
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
+A + ++ + + TYN +I +CK G E+ EL + ++G+ P+ I Y T+
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
I+ F +K EE +L M G +P+ TY+ ++
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 213/416 (51%), Gaps = 4/416 (0%)
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
+V +A+ + M+K FP++V FN ++ K +L + + ++M + + +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL---GISHDLY 119
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
+Y+ IN FC++ L LA VL M+K G+EP + T ++L++GY + +++ L D+M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
VE G P+ + ++++ L+ H EA ++ M+ + PD +Y + GLC+ G +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
AL L ++ K + D N +++ +CK M +G+ PDV+T +++
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
I C G A RL + MI+ PN+ +++ I+ K A+ L DE+ KR +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 527 -LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
D T+++LI+G+ ++DEA + M S N VTY+TLI CK EE E
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
L + M +G+ + +TYTTLI F + + + M+ GV P+ TY+ ++
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 211/436 (48%), Gaps = 33/436 (7%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L M G+ + TF I+ L + EA+ ++ +M++ G P++V++ +++G C
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 259 KTGSLDLALKVMKKM-----------------------------NLMT---GNSVWPNSV 286
K G +DLAL ++KKM NL T + P+
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
+Y+S+I+ C G A +L DM++ P+V T++ LID + + G L E+ +L DEM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
++R + P+I Y+S++ H ++EA + MI K P+ +Y+ L +G C+ +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
E ++L ++ + L+ + + L++ ++ M++ G+ P++ T +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
+DG CK G KA+ ++ + + +P++ YN I G+CK + L L + +
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 527 L-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
+ +NT+ISG+ G +EA L +MK G N TYNTLI ++G E + E
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAE 594
Query: 586 LMKMMIMQGIRPDCIT 601
L+K M G D T
Sbjct: 595 LIKEMRSCGFAGDAST 610
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 217/448 (48%), Gaps = 6/448 (1%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
L++ +++ Y+ F L+ A ++ ++ RGC + + ++ L
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 189 EVNDIDRFWRLYKGMGSFGHVE-NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNV 247
+ DID L K M G +E +V +N I LCK + +A+ + M G P+V
Sbjct: 235 KRGDIDLALSLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
+++ +I C G A +++ M + PN V+++++I+ F K+G L+ AE++
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSD---MIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
+M+K +P + TY++LI+G+ L+E+ + + M+ + FPN+V Y++++ +
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
+EE ++ +M + + + +Y L G + A + Q++ + + +
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 428 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
NILL+ +CK+ + + PD+YT +I+G CK G E L+ +
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQID 546
PN+ YN+ I+G C+ S + A +L+ ++++ L ++ T+NTLI G +
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 547 EAFGLTTEMKSLGLSANRVTYNTLINLL 574
+ L EM+S G + + T + N+L
Sbjct: 591 ASAELIKEMRSCGFAGDASTIGLVTNML 618
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 210/431 (48%), Gaps = 8/431 (1%)
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
A E +A L++ ++ Q + +V + G + A ++ ++ V
Sbjct: 204 ASEAVA---LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+N + L + +D L+ M + G +V T++ I LC R +A ++ M+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
+ PNVV+F+ +ID K G L A K+ +M S+ P+ +Y+S+INGFC
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM---IKRSIDPDIFTYSSLINGFCMHD 377
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
L A+ + M+ P+V TY+TLI G+ + +EE + L EM +RGL N V Y
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
++++ ++ D + A V M+ + P+ +Y IL +GLC+NG L +A+ + + +
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 420 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
+ D ++ NI++ +CK+ ++ +G+ P+V T+I G C+ G+ E+A
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 480 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISG 538
L M + PN YN+ I + + + L+ E+R DA+T L++
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTN 616
Query: 539 YSNSGQIDEAF 549
+ G++D++F
Sbjct: 617 MLHDGRLDKSF 627
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 158/312 (50%), Gaps = 1/312 (0%)
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+++++ L +MV+ FP+IV +N +L + + E + M I D Y+Y+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
CR L+ AL + +++K D +L+ LLN C S M+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
PD +T T+I G +A+ L + M++ QP+L Y + +NGLCK D+A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 516 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
+L+ ++ K K+ D +NT+I G +D+A L TEM + G+ + TY++LI+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C G +A L+ MI + I P+ +T++ LI F K+ E L+D MI + + PD
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 635 KTYDAIVTPFLL 646
TY +++ F +
Sbjct: 364 FTYSSLINGFCM 375
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 173/380 (45%), Gaps = 36/380 (9%)
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A ++ GDMVK+ PS+ + L+ A+ E + L ++M G+ ++ Y+ +
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
R + A VL+ M+ PD + + L G C + +++A+ L +Q+++
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
D F+ L++ + M+ RG PD+ T TV++G CK G+ + AL L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR------------------- 524
M K + ++ IYN+ I+GLCK D A NL E+ +
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 525 -------KLL----------DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
+LL + TF+ LI + G++ EA L EM + + TY
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 627
++LIN C + +EAK + ++MI + P+ +TY+TLI F K EE + L M
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 628 KGVIPDQKTYDAIVTPFLLA 647
+G++ + TY ++ F A
Sbjct: 427 RGLVGNTVTYTTLIHGFFQA 446
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 215/416 (51%), Gaps = 4/416 (0%)
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
++ EA+ + M+K FP++V F+ ++ K DL + +KM ++ V N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEIL---GVSHNLY 101
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
+YN +IN C++ L A +LG M+K G+ PS+ T +L++G+ + E++ L D+M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
VE G P+ V + ++++ L++H EA ++ M+ K PD +Y + GLC+ G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
AL L N++ K + D + +++ +CK M +G+ PDV+T +++
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
I C G A RL + M++ PN+ +NS I+ K A+ L DE+ +R +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 527 -LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
+ T+N+LI+G+ ++DEA + T M S + VTYNTLIN CK + E
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
L + M +G+ + +TYTTLI F + + + M+ GV P+ TY+ ++
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 247/518 (47%), Gaps = 33/518 (6%)
Query: 161 AYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY 220
A D+ E+ S+ ++ LS + ++ D + M G N+ T+N+ I
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 221 ALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM------- 273
LC+ ++ A+ ++ +M+K G P++V+ N +++G C + A+ ++ +M
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 274 -------------------------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
M P+ V+Y ++ING CK+G LA +L
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
M K E V Y+T+ID ++ ++++L L EM +G+ P++ Y+S++ L +
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
G +AS++LSDM+++ I P+ ++ L + + G L EA KL +++++ + + +
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
N L+N C M+++ PDV T T+I+G CK + L+ M +
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 547
N Y + I+G + + D A+ + ++ + + T+NTL+ G +G++++
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
A + ++ + + TYN + +CK G E+ +L + ++G++PD I Y T+I+
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 608 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
F KK EE L M G +PD TY+ ++ L
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHL 566
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 139/548 (25%), Positives = 251/548 (45%), Gaps = 37/548 (6%)
Query: 92 LHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDE----SYQHCPAVFDA 147
L + L +V SR F + + L A + +L+ + ++ H ++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
++ + A ++ ++ G S+ N+ L+ N I L M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
+ + TF ++ L + + EA+ ++ RM+ G P++V++ +I+G CK G DLAL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 268 KVMKKM-----------------------------NLMT---GNSVWPNSVSYNSIINGF 295
++ KM NL T + P+ +Y+S+I+
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
C G A +L DM++ P+V T+ +LID +A+ G L E+ +L DEM++R + PNI
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
V YNS++ H ++EA ++ + M+ K PD +Y L G C+ + + ++L
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+ + L+ + + L++ ++ M++ G+ P++ T T++DG CK G
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNT 534
EKA+ ++ + K +P++ YN G+CK + +L L + + D +NT
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 594
+ISG+ G +EA+ L +MK G + TYNTLI ++G + EL+K M
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Query: 595 IRPDCITY 602
D TY
Sbjct: 586 FAGDASTY 593
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 212/434 (48%), Gaps = 14/434 (3%)
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
A E +A L+E ++ + Q + A++ + G + A +++ ++ V
Sbjct: 186 ASEAVA---LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
++ + L + +D L+ M + G +V T++ I LC R +A ++ ML
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
+ PNVV+FN +ID K G L A K+ +M S+ PN V+YNS+INGFC
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM---IQRSIDPNIVTYNSLINGFCMHD 359
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
L A+++ MV P V TY TLI+G+ + + + + L +M RGL N V Y
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
++++ ++ D + A V M+ + P+ +Y L +GLC+NG L +A+ + + K
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 420 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
+ D ++ NI+ +CK+ S+ +G+ PDV T+I G CK G E+A
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 480 LRLYNGMIKMDEQ---PNLTIYNSFINGLCKMASTDVAKNLVDELRK-RKLLDATTFNTL 535
L+ IKM E P+ YN+ I + + L+ E+R R DA+T+ L
Sbjct: 540 YTLF---IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-L 595
Query: 536 ISGYSNSGQIDEAF 549
++ + G++D+ F
Sbjct: 596 VTDMLHDGRLDKGF 609
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 212/421 (50%), Gaps = 7/421 (1%)
Query: 224 KECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP 283
++ ++ +AI + M+K FP++V F+ ++ K DL + + ++M + +
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL---GISH 108
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
N +Y+ IN FC++ L LA +LG M+K G+ PS+ T +L++G+ + E++ L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
D+MVE G P+ V + ++++ L++H EA ++ M+ K PD +Y + GLC+
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
G AL L N++ K + D N +++ +CK M T+G+ PDV+T
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
+I C G A RL + M++ + P+L +N+ I+ K A+ L DE+ K
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 524 RK--LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN-LLCKNGCD 580
K D +NTLI G+ +++E + EM GL N VTY TLI+ CD
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
A+ + K M+ G+ PD +TY L+ + E + + +YM + + D TY +
Sbjct: 409 -NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 641 V 641
+
Sbjct: 468 I 468
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 224/442 (50%), Gaps = 5/442 (1%)
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKEC 226
+++ G +++ ++ F+++ + + + M G+ ++ T N + C
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
R+ EA+ ++ +M++ G P+ V+F ++ G + A+ ++++M + P+ V
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV---KGCQPDLV 216
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
+Y ++ING CK+G LA +L M K E V Y T+IDG ++ ++++ L ++M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
+G+ P++ YN ++ L +G +AS++LSDM++K+I PD + L + + G L
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 407 TEALKLHNQILKFD-LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
EA KL+++++K D + N L+ CK M RGL + T T
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
+I G + + + A ++ M+ P++ YN ++GLC + + A + + ++KR
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 526 L-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
+ LD T+ T+I +G++++ + L + G+ N VTY T+++ C+ G EEA
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 585 ELMKMMIMQGIRPDCITYTTLI 606
L M G P+ TY TLI
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLI 538
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 212/429 (49%), Gaps = 5/429 (1%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
S+ N+ L+ N I L M G+ + TF ++ L + + EA+ ++
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
RM+ G P++V++ +I+G CK G DLAL ++ KM + + V YN+II+G
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME---KGKIEADVVIYNTIIDGL 260
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
CK + A ++ M G +P V TY LI +G ++ RL +M+E+ + P++
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMI-DKHICPDQYSYAILTEGLCRNGYLTEALKLHN 414
V +N+++ + G + EA K+ +M+ KH PD +Y L +G C+ + E +++
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 415 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 474
++ + L+ + + L++ ++ M++ G+ PD+ T ++DG C G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 475 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFN 533
N E AL ++ M K D + ++ Y + I LCK + +L L + + + T+
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
T++SG+ G +EA L EMK G N TYNTLI ++G + + EL+K M
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560
Query: 594 GIRPDCITY 602
G D T+
Sbjct: 561 GFAGDASTF 569
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 235/499 (47%), Gaps = 67/499 (13%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
S+ ++ LS + ++N D L + M + G N+ T+++ I C+ ++ A+ ++
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM---------------------- 273
+M+K G P++V+ N +++G C + A+ ++ +M
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 274 ----------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
M P+ V+Y ++ING CK+G LA +L M K E V Y
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
T+IDG ++ ++++ L ++M +G+ P++ YN ++ L +G +AS++LSDM++
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
K+I PD + L + + G L EA KL+++++K
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK------------------------- 348
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
++ PDV T+I G CK E+ + ++ M + N Y + I+
Sbjct: 349 ---------SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 504 GLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
G + D A+ + ++ + D T+N L+ G N+G ++ A + M+ +
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
+ VTY T+I LCK G E+ +L + ++G++P+ +TYTT+++ F +K EE AL
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 623 DYMILKGVIPDQKTYDAIV 641
M G +P+ TY+ ++
Sbjct: 520 VEMKEDGPLPNSGTYNTLI 538
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 205/424 (48%), Gaps = 8/424 (1%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
L++ +++ YQ F LV Q A ++ + +GC + + ++ L
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 189 EVNDIDRFWRLYKGMGSFGHVE-NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNV 247
+ + D L M G +E +V +N I LCK + +A + +M G P+V
Sbjct: 227 KRGEPDLALNLLNKMEK-GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
++N +I C G A +++ M ++ P+ V +N++I+ F K+G L+ AE++
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDM---LEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 308 LGDMVKAGF-EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+MVK+ P V Y TLI G+ ++ +EE + + EM +RGL N V Y ++++ +
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ D + A V M+ + PD +Y IL +GLC NG + AL + + K D+ D
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ ++ +CK+ S+ +G+ P+V T T++ G C+ G E+A L+ M
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 545
+ PN YN+ I + + L+ E+R DA+TF L++ + G++
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRL 581
Query: 546 DEAF 549
D++F
Sbjct: 582 DKSF 585
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 2/343 (0%)
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ GDMVK+ PS+ ++ L+ A+ + + L ++M G+ N+ Y+ + +
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
R + A +L M+ P + L G C ++EA+ L +Q+++ D
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ L++ + + M+ +G PD+ T VI+G CK G + AL L N M
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 545
K + ++ IYN+ I+GLCK D A +L +++ + + D T+N LIS N G+
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM-QGIRPDCITYTT 604
+A L ++M ++ + V +N LI+ K G EA++L M+ + PD + Y T
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
LI F K EE + + M +G++ + TY ++ F A
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 136/284 (47%), Gaps = 4/284 (1%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
L LL + + +++ ++ + + A+D+ ++ T+G V +N +S
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDG-TFP 245
L RL M ++ FN I A KE ++VEA + M+K FP
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+VV++N +I G CK ++ ++V ++ M+ + N+V+Y ++I+GF + A+
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFRE---MSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
V MV G P + TY L+DG G++E +L + + M +R + +IV Y +++ L
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
+ G +E+ + + K + P+ +Y + G CR G EA
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 1/238 (0%)
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
L +A+ L ++K + LL+ I K M G+ ++YT +
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
I+ C+ AL + M+K+ P++ NS +NG C A LVD++ +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 526 LL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
D TF TL+ G + EA L M G + VTY +IN LCK G + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
L+ M I D + Y T+I K H ++ L + M KG+ PD TY+ +++
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 240/540 (44%), Gaps = 103/540 (19%)
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
L S+ +N LS + ++ D L + M G N+ T+N+ I C+ ++ A+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM-------------------- 273
++ +M+K G P++V+ + +++G C + A+ ++ +M
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 274 ------------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 321
+ M PN V+Y ++NG CK+G + LA +L M A E V
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
+ T+ID ++ ++++L L EM +G+ PN+V Y+S++ L +G +AS++LSDM
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 441
I+K I P+ ++ L + + G EA KLH+
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD-------------------------- 280
Query: 442 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 501
MI R + PD++T ++I+G C +KA +++ M+ D P+L YN+
Sbjct: 281 ---------MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 502 INGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
I G CK + L E+ R L+ D T+ TLI G + G D A + +M S G+
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 561 SANRVTYNTLINLLCKNGCDEEAKELMKMM------------------------------ 590
+ +TY+ L++ LC NG E+A E+ M
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 591 -----IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
++G++P+ +TY T+I+ K +E AL M G +PD TY+ ++ L
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 206/405 (50%), Gaps = 4/405 (0%)
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
M+K P++ FN ++ K DL + + +KM + + N +YN +IN FC+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL---GISHNLYTYNILINCFCR 57
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
+ + LA +LG M+K G+EPS+ T ++L++GY + +++ L D+MVE G P+ +
Sbjct: 58 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
+ ++++ L+ H EA ++ M+ + P+ +Y ++ GLC+ G + A L N++
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
+ D N +++ +CK M T+G+ P+V T +++I C G
Sbjct: 178 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLI 536
A +L + MI+ PNL +N+ I+ K A+ L D++ KR + D T+N+LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
+G+ ++D+A + M S + TYNTLI CK+ E+ EL + M +G+
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
D +TYTTLI + + M+ GV PD TY ++
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 209/425 (49%), Gaps = 33/425 (7%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L M G+ + TF I+ L + EA+ ++ RM++ G PN+V++ ++++G C
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161
Query: 259 KTGSLDLALKVMKKM-----------------------------NL---MTGNSVWPNSV 286
K G +DLA ++ KM NL M + PN V
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
+Y+S+I+ C G A ++L DM++ P++ T+ LID + + G E+ +L D+M
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
++R + P+I YNS++ H +++A ++ M+ K PD +Y L +G C++ +
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
+ +L ++ L+ D + L+ + M++ G+PPD+ T + +
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
+DG C G EKAL +++ M K + + ++ IY + I G+CK D +L L + +
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 527 L-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
+ T+NT+ISG + + EA+ L +MK G + TYNTLI ++G + E
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 586 LMKMM 590
L++ M
Sbjct: 522 LIREM 526
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 209/456 (45%), Gaps = 42/456 (9%)
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
A E +A L++ ++ Q + +V + G + A++++ ++ V
Sbjct: 131 ASEAVA---LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+N + L + +D L+K M + G NV T++ I LC R +A ++ M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
+ PN+V+FN +ID K G ++ K + M S+ P+ +YNS+INGFC
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKF---VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
L A+++ MV P + TY TLI G+ + +E+ L EM RGL + V Y
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
+++ L+ GD + A KV M+ + PD +Y+IL +GLC NG L +AL++
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV------- 417
Query: 420 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
+Y+ KS + D+Y T+I+G CK G +
Sbjct: 418 ------------FDYMQKSE----------------IKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 480 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISG 538
L+ + +PN+ YN+ I+GLC A L+ ++++ L D+ T+NTLI
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Query: 539 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
+ G + L EM+S + T + N+L
Sbjct: 510 HLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 146/302 (48%), Gaps = 1/302 (0%)
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
MV+ P+I +N +L + + + + M I + Y+Y IL CR
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
++ AL L +++K +L+ LLN C M+ G PD T T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
+I G +A+ L + M++ QPNL Y +NGLCK D+A NL++++ K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 526 L-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
+ D FNT+I +D+A L EM++ G+ N VTY++LI+ LC G +A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+L+ MI + I P+ +T+ LI F K+ E LHD MI + + PD TY++++ F
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 645 LL 646
+
Sbjct: 301 CM 302
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 1/335 (0%)
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
MVK+ PS+ + L+ A+ + + L ++M G+ N+ YN ++ R
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
+ A +L M+ P + + L G C +++A+ L +Q+++ D +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
L++ + M+ RG P++ T V++G CK G+ + A L N M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 549
+ ++ I+N+ I+ LCK D A NL E+ + + + T+++LIS + G+ +A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 550 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
L ++M ++ N VT+N LI+ K G EA++L MI + I PD TY +LI F
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
++ + ++M+ K PD TY+ ++ F
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 225/451 (49%), Gaps = 11/451 (2%)
Query: 26 NPTAAAEDIIFRAIC-VHLKHRRWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWV 84
NP +D+ F + HL W L +LS L +F V V+ + L+L+F+NW
Sbjct: 46 NPEPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWA 105
Query: 85 GMLFP--HSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIA-PLELLEALMDESYQHC 141
P HSL + +L L +R F A S++R+++ G+ P ++ +AL+ SY+ C
Sbjct: 106 KTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALL-YSYREC 164
Query: 142 ---PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWR 198
P VFD+L + + A D +++ G L +V + N ++S L+ +D R
Sbjct: 165 DSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
Y+ M N T N+ + C+ ++ + I ++ M + G VS+N +I G C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
+ G L ALK+ N+M + + PN V++N++I+GFC+ L A +V G+M P
Sbjct: 285 EKGLLSSALKL---KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+ TY TLI+GY++ G E + R ++MV G+ +I+ YN++++ L + +A++ +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
++ +++ P+ +++ L G C +L+ +++ + + N+L++ C++
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
M+ R +P D T V +G
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 156/361 (43%), Gaps = 38/361 (10%)
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFE--PSVRTYATLIDGYARWGSLEESLRLCD 344
S SI+ GG+ L +V ++ + E + R + +L +A +
Sbjct: 133 SAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFM 192
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
+M + G P + N+ + L G ++ A + +M I P+ Y+ ++ G CR+G
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
L + ++L + + S N
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYN----------------------------------- 277
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
T+I G+C+ G AL+L N M K QPN+ +N+ I+G C+ A + E++
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 525 KLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ T T+NTLI+GYS G + AF +M G+ + +TYN LI LCK +A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 643
+ +K + + + P+ T++ LI + + + L+ MI G P+++T++ +V+
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 644 F 644
F
Sbjct: 458 F 458
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 154/393 (39%), Gaps = 40/393 (10%)
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
V++ + K+ F + S I+ G +DL KV + L + ++S+
Sbjct: 121 VLHTLTKNRKFKSAES---ILRDVLVNGGVDLPAKVFDAL-LYSYRECDSTPRVFDSLFK 176
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
F A + M GF P+V + + G ++ +LR EM + P
Sbjct: 177 TFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISP 236
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
N N ++ R G +++ ++L DM SY L G C G L+ ALKL
Sbjct: 237 NPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
N + K L + + N L++ C++ G M + P+ T T+I+G +
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL------ 527
G+ E A R Y M+ Q ++ YN+ I GLCK A T A V EL K L+
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
Query: 528 ------------------------------DATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
+ TFN L+S + + D A + EM
Sbjct: 417 SALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR 476
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
+ + T + + N L G D+ K+L++ M
Sbjct: 477 RSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 129/286 (45%), Gaps = 3/286 (1%)
Query: 142 PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYK 201
P + ++ + G + +++ ++ G + ++N ++ E + +L
Sbjct: 238 PYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKN 297
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
MG G NV TFN I+ C+ ++ EA V M PN V++N +I+G + G
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 262 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 321
++A + + M N + + ++YN++I G CK+ A + + ++ K P+
Sbjct: 358 DHEMAFRFYEDM---VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS 414
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
T++ LI G + + L M+ G PN +N ++ R+ D + AS+VL +M
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
+ + I D + + GL G KL ++ ++++F+
Sbjct: 475 VRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 225/451 (49%), Gaps = 11/451 (2%)
Query: 26 NPTAAAEDIIFRAIC-VHLKHRRWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWV 84
NP +D+ F + HL W L +LS L +F V V+ + L+L+F+NW
Sbjct: 46 NPEPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWA 105
Query: 85 GMLFP--HSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIA-PLELLEALMDESYQHC 141
P HSL + +L L +R F A S++R+++ G+ P ++ +AL+ SY+ C
Sbjct: 106 KTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALL-YSYREC 164
Query: 142 ---PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWR 198
P VFD+L + + A D +++ G L +V + N ++S L+ +D R
Sbjct: 165 DSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
Y+ M N T N+ + C+ ++ + I ++ M + G VS+N +I G C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
+ G L ALK+ N+M + + PN V++N++I+GFC+ L A +V G+M P
Sbjct: 285 EKGLLSSALKL---KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+ TY TLI+GY++ G E + R ++MV G+ +I+ YN++++ L + +A++ +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
++ +++ P+ +++ L G C +L+ +++ + + N+L++ C++
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
M+ R +P D T V +G
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 156/361 (43%), Gaps = 38/361 (10%)
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFE--PSVRTYATLIDGYARWGSLEESLRLCD 344
S SI+ GG+ L +V ++ + E + R + +L +A +
Sbjct: 133 SAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFM 192
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
+M + G P + N+ + L G ++ A + +M I P+ Y+ ++ G CR+G
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
L + ++L + + S N
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYN----------------------------------- 277
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
T+I G+C+ G AL+L N M K QPN+ +N+ I+G C+ A + E++
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 525 KLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ T T+NTLI+GYS G + AF +M G+ + +TYN LI LCK +A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 643
+ +K + + + P+ T++ LI + + + L+ MI G P+++T++ +V+
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 644 F 644
F
Sbjct: 458 F 458
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 154/393 (39%), Gaps = 40/393 (10%)
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
V++ + K+ F + S I+ G +DL KV + L + ++S+
Sbjct: 121 VLHTLTKNRKFKSAES---ILRDVLVNGGVDLPAKVFDAL-LYSYRECDSTPRVFDSLFK 176
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
F A + M GF P+V + + G ++ +LR EM + P
Sbjct: 177 TFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISP 236
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
N N ++ R G +++ ++L DM SY L G C G L+ ALKL
Sbjct: 237 NPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
N + K L + + N L++ C++ G M + P+ T T+I+G +
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL------ 527
G+ E A R Y M+ Q ++ YN+ I GLCK A T A V EL K L+
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
Query: 528 ------------------------------DATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
+ TFN L+S + + D A + EM
Sbjct: 417 SALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR 476
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
+ + T + + N L G D+ K+L++ M
Sbjct: 477 RSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 129/286 (45%), Gaps = 3/286 (1%)
Query: 142 PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYK 201
P + ++ + G + +++ ++ G + ++N ++ E + +L
Sbjct: 238 PYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKN 297
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
MG G NV TFN I+ C+ ++ EA V M PN V++N +I+G + G
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 262 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 321
++A + + M N + + ++YN++I G CK+ A + + ++ K P+
Sbjct: 358 DHEMAFRFYEDM---VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSS 414
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
T++ LI G + + L M+ G PN +N ++ R+ D + AS+VL +M
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
+ + I D + + GL G KL ++ ++++F+
Sbjct: 475 VRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 179/685 (26%), Positives = 285/685 (41%), Gaps = 90/685 (13%)
Query: 48 WSALEQLSPKLTTFMVNRVVSEFHN--SPHLALDFYNWVGMLFPHS--LHSSCTLLQVLV 103
+ +QL L+ +R+ EF + +P ALDF+ F S L S C L+ +L+
Sbjct: 78 YEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLL 137
Query: 104 NSRWFTEA-LSLMRNLIAKEGIAPLELLEA--LMDESYQHCPAVFDALVRA--------- 151
++ + A + L+R + + P L ++ + ++ FD +R
Sbjct: 138 DANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEV 197
Query: 152 -CTQVGATEGAY---DVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
CTQ +G Y DV L +G S N L+ LV N+ + + + G
Sbjct: 198 YCTQF-KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-G 255
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
+V F AI A CK +V EA+ + +M + G PNVV+FN +IDG G D A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 268 KVMKKM--------------------------------NLMTGNSVWPNSVSYNSIINGF 295
+KM MT PN + YN++I+ F
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS-------------------- 335
+ G L A E+ MV G + TY TLI GY + G
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 336 ---------------LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
+ +LR EM+ R + P + +++ L +HG +A ++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 440
++K D + L GLC G L EA ++ +IL + D S N L++ C
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 441 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 500
M+ RGL PD YT + +I G + E+A++ ++ + P++ Y+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 501 FINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLG 559
I+G CK T+ + DE+ + + T +N LI Y SG++ A L +MK G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 560 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 619
+S N TY +LI + EEAK L + M M+G+ P+ YT LI + K +V
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 620 ALHDYMILKGVIPDQKTYDAIVTPF 644
L M K V P++ TY ++ +
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGY 760
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 229/512 (44%), Gaps = 14/512 (2%)
Query: 131 EALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEV 190
E +++ + + LV+ T+ AY V+ E+ +G +V +NN + +E
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 191 NDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSF 250
+++ + M S G +T+N I CK + A ++ ML G N SF
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
+I C D AL+ + +M L ++ P ++I+G CK G A E+
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLL---RNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
+ GF RT L+ G G L+E+ R+ E++ RG + V YN+++
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
++EA L +M+ + + PD Y+Y+IL GL + EA++ + + ++ D ++ ++
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
+++ CK+ M+++ + P+ +I C+ G AL L M
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 549
PN Y S I G+ ++ + AK L +E+R L + + LI GY GQ+ +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 550 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
L EM S + N++TY +I ++G EA L+ M +GI PD ITY I +
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
K+ E KG D++ Y AI+
Sbjct: 796 LKQGGVLEA--------FKG--SDEENYAAII 817
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 191/429 (44%), Gaps = 4/429 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
+E+ + ++ + + ++ L++ + G + A ++ E+ + G V+ ++ + +
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L D R M I LCK + +A+ + ++ L G +
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
+ N ++ G C+ G LD A ++ K++ G + VSYN++I+G C K L A
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEI---LGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
L +MVK G +P TY+ LI G +EE+++ D+ G+ P++ Y+ ++
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ EE + +M+ K++ P+ Y L CR+G L+ AL+L + + ++
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ L+ + M GL P+V+ +IDG KLG K L M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 545
+ PN Y I G + + A L++E+R++ ++ D+ T+ I GY G +
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Query: 546 DEAFGLTTE 554
EAF + E
Sbjct: 802 LEAFKGSDE 810
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%)
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
D F T I+ + G+++EA L ++M+ G++ N VT+NT+I+ L G +EA
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
+ M+ +G+ P ITY+ L+ + + + M KG P+ Y+ ++ F+ A
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 179/685 (26%), Positives = 285/685 (41%), Gaps = 90/685 (13%)
Query: 48 WSALEQLSPKLTTFMVNRVVSEFHN--SPHLALDFYNWVGMLFPHS--LHSSCTLLQVLV 103
+ +QL L+ +R+ EF + +P ALDF+ F S L S C L+ +L+
Sbjct: 78 YEQCKQLITVLSPLEFDRLFPEFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLL 137
Query: 104 NSRWFTEA-LSLMRNLIAKEGIAPLELLEA--LMDESYQHCPAVFDALVRA--------- 151
++ + A + L+R + + P L ++ + ++ FD +R
Sbjct: 138 DANLLSAARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEV 197
Query: 152 -CTQVGATEGAY---DVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
CTQ +G Y DV L +G S N L+ LV N+ + + + G
Sbjct: 198 YCTQF-KRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-G 255
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
+V F AI A CK +V EA+ + +M + G PNVV+FN +IDG G D A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 268 KVMKKM--------------------------------NLMTGNSVWPNSVSYNSIINGF 295
+KM MT PN + YN++I+ F
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS-------------------- 335
+ G L A E+ MV G + TY TLI GY + G
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 336 ---------------LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
+ +LR EM+ R + P + +++ L +HG +A ++
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 440
++K D + L GLC G L EA ++ +IL + D S N L++ C
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 441 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 500
M+ RGL PD YT + +I G + E+A++ ++ + P++ Y+
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 501 FINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLG 559
I+G CK T+ + DE+ + + T +N LI Y SG++ A L +MK G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 560 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 619
+S N TY +LI + EEAK L + M M+G+ P+ YT LI + K +V
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 620 ALHDYMILKGVIPDQKTYDAIVTPF 644
L M K V P++ TY ++ +
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGY 760
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 229/512 (44%), Gaps = 14/512 (2%)
Query: 131 EALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEV 190
E +++ + + LV+ T+ AY V+ E+ +G +V +NN + +E
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 191 NDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSF 250
+++ + M S G +T+N I CK + A ++ ML G N SF
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
+I C D AL+ + +M L ++ P ++I+G CK G A E+
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLL---RNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
+ GF RT L+ G G L+E+ R+ E++ RG + V YN+++
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
++EA L +M+ + + PD Y+Y+IL GL + EA++ + + ++ D ++ ++
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
+++ CK+ M+++ + P+ +I C+ G AL L M
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 549
PN Y S I G+ ++ + AK L +E+R L + + LI GY GQ+ +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 550 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
L EM S + N++TY +I ++G EA L+ M +GI PD ITY I +
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
K+ E KG D++ Y AI+
Sbjct: 796 LKQGGVLEA--------FKG--SDEENYAAII 817
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 191/429 (44%), Gaps = 4/429 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
+E+ + ++ + + ++ L++ + G + A ++ E+ + G V+ ++ + +
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L D R M I LCK + +A+ + ++ L G +
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
+ N ++ G C+ G LD A ++ K++ G + VSYN++I+G C K L A
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEI---LGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
L +MVK G +P TY+ LI G +EE+++ D+ G+ P++ Y+ ++
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ EE + +M+ K++ P+ Y L CR+G L+ AL+L + + ++
Sbjct: 622 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 681
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ L+ + M GL P+V+ +IDG KLG K L M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 545
+ PN Y I G + + A L++E+R++ ++ D+ T+ I GY G +
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGV 801
Query: 546 DEAFGLTTE 554
EAF + E
Sbjct: 802 LEAFKGSDE 810
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%)
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
D F T I+ + G+++EA L ++M+ G++ N VT+NT+I+ L G +EA
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
+ M+ +G+ P ITY+ L+ + + + M KG P+ Y+ ++ F+ A
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/541 (25%), Positives = 255/541 (47%), Gaps = 23/541 (4%)
Query: 118 LIAKEGIAPLELLEALMDESYQHC----PAVFDALVRA-CTQVGATEGAYDVICELRTRG 172
+++KEG+ +E +AL D + +L+ C + +G Y+++ E++ R
Sbjct: 356 VMSKEGV--MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG-YELLVEMKKRN 412
Query: 173 CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAI 232
++S + + + + D+D + + K M + G NV + I + R +A+
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 233 TVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII 292
V+ M + G P++ +N +I G K +D A + +M N + PN+ +Y + I
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM---VENGLKPNAFTYGAFI 529
Query: 293 NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 352
+G+ + A++ + +M + G P+ LI+ Y + G + E+ MV++G+
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 353 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 412
+ Y ++ L+++ +++A ++ +M K I PD +SY +L G + G + +A +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 413 HNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 472
+++++ L + N+LL C+S M +GL P+ T T+IDG CK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 473 LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTF 532
G+ +A RL++ M P+ +Y + ++G C++ + A + +K F
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF 769
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSA--------NRVTYNTLINLLCKNGCDEEAK 584
N LI+ G+ + L TE+ + + N VTYN +I+ LCK G E AK
Sbjct: 770 NALINWVFKFGKTE----LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
EL M + P ITYT+L+ ++K E+ + D I G+ PD Y I+ F
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
Query: 645 L 645
L
Sbjct: 886 L 886
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 237/511 (46%), Gaps = 9/511 (1%)
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
ELL + + P + +V+ G +GAY+++ E+ GC +V + +
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 188 VEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNV 247
++ + R+ K M G ++ +N I L K R+ EA + + M+++G PN
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
++ I G + A K +K+M V PN V +IN +CKKG ++ A
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMREC---GVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
MV G +TY L++G + ++++ + EM +G+ P++ Y ++ +
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
G+M++AS + +M+++ + P+ Y +L G CR+G + +A +L +++ L +A +
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 428 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
+++ CKS M +GL PD + T++DG C+L + E+A+ ++ G
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTN 758
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-----LDATTFNTLISGYSNS 542
K + +N+ IN + K T++ +++ L + T+N +I
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
G ++ A L +M++ L +TY +L+N K G E + I GI PD I Y
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
+ +I F K+ + + L D M K + D
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 202/420 (48%), Gaps = 4/420 (0%)
Query: 158 TEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
+ A ++ E+ + G + + ++ + + + +++ L+ GM + G + +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
I C+E V + ++ M K + ++ ++ G C +G LD A ++K+ M
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE---MI 444
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
+ PN V Y ++I F + A VL +M + G P + Y +LI G ++ ++
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
E+ EMVE GL PN Y + + + A K + +M + + P++ L
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
C+ G + EA + ++ ++ DA + +L+N + K+ M +G+
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
PDV++ +I+G KLGN +KA +++ M++ PN+ IYN + G C+ + AK L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 518 VDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
+DE+ + L +A T+ T+I GY SG + EAF L EMK GL + Y TL++ C+
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 167/648 (25%), Positives = 275/648 (42%), Gaps = 45/648 (6%)
Query: 13 IFFRAFHAG-KRFSNPTAAAEDIIFRAICVHLKHRRWS---ALEQLSPKLTTFMVNRVV- 67
+ FR+F ++ S+ +A I LK W LS ++ +V V+
Sbjct: 19 LLFRSFSVNVEKLSDASAEIAGI--------LKQENWRDTLVSSNLSIEINPEVVLSVLR 70
Query: 68 SEFHNSPHLALDFYNWVG--MLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIA 125
S+ + P L F+NWV + L S L L N F +ALS++ +I +
Sbjct: 71 SKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPV 130
Query: 126 PLELLEALMDESYQHCP-----AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAW 180
E+ +++ S + +F L G E A V + +
Sbjct: 131 A-EVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRC 189
Query: 181 NNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLK 240
L L+ N +D FW +YKGM V +V T+++ I A C+ V ++ K
Sbjct: 190 KVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNV--------QLGK 241
Query: 241 DGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG 300
D F F T ++D ALK+ + M + P +Y+ +I+G CK
Sbjct: 242 DVLFKTEKEFRT------ATLNVDGALKLKESM---ICKGLVPLKYTYDVLIDGLCKIKR 292
Query: 301 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 360
L A+ +L +M G TY+ LIDG + + + + L EMV G+ +Y+
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDC 352
Query: 361 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 420
+ + + G ME+A + MI + P +YA L EG CR + + +L ++ K +
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID---GNCKLGNTE 477
++ ++ ++ +C S MI G P+V T+I N + G+
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD-- 470
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLI 536
A+R+ M + P++ YNS I GL K D A++ + E+ + L +A T+ I
Sbjct: 471 -AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
SGY + + A EM+ G+ N+V LIN CK G EA + M+ QGI
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
D TYT L+ K ++ + M KG+ PD +Y ++ F
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/523 (23%), Positives = 228/523 (43%), Gaps = 62/523 (11%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVG 156
TL++ + + F +A+ +++ + ++GIAP +++L+ ++
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEM-KEQGIAPDIF--------------CYNSLIIGLSKAK 501
Query: 157 ATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFN 216
+ A + E+ G + + F+S +E ++ + K M G + N
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 217 LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
I CK+ +V+EA + M+ G + ++ ++++G K +D A ++ ++M
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR-- 619
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
G + P+ SY +INGF K G + A + +MV+ G P+V Y L+ G+ R G +
Sbjct: 620 -GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
E++ L DEM +GL PN V Y +I+ + GD+ EA ++ +M K + PD + Y L
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 397 TEGLCRNGYLTEAL------------------KLHNQILKFDLIE--------------D 424
+G CR + A+ L N + KF E D
Sbjct: 739 VDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 425 AF------SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
F + NI+++Y+CK M L P V T ++++G K+G +
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD------ATTF 532
+++ I +P+ +Y+ IN K T A LVD++ + +D +T
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTC 918
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
L+SG++ G+++ A + M L + T LIN C
Sbjct: 919 RALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 189/441 (42%), Gaps = 46/441 (10%)
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII---------------- 292
SF+ + C GS + AL V+++M + N WP + ++SI+
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERM--IERN--WPVAEVWSSIVRCSQEFVGKSDDGVLF 154
Query: 293 ----NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
+G+ KG + A V + P + L+D RW L+ + MVE
Sbjct: 155 GILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVE 214
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVL---------------------SDMIDKHIC 387
R + ++ Y+ ++ R G+++ VL MI K +
Sbjct: 215 RNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLV 274
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
P +Y+Y +L +GLC+ L +A L ++ + D + ++L++ + K
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
M++ G+ Y I K G EKA L++GMI P Y S I G C+
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 508 MASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
+ L+ E++KR + + T+ T++ G +SG +D A+ + EM + G N V
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 626
Y TLI +N +A ++K M QGI PD Y +LI +K +E + M+
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 627 LKGVIPDQKTYDAIVTPFLLA 647
G+ P+ TY A ++ ++ A
Sbjct: 515 ENGLKPNAFTYGAFISGYIEA 535
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 147/318 (46%), Gaps = 11/318 (3%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
+ + +++E +++ L+ + G E A +++ E+ +G + + +
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ D+ +RL+ M G V + + + C+ V AIT I+ K G +
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT-IFGTNKKGCASSTA 767
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVW---PNSVSYNSIINGFCKKGGLLLAE 305
FN +I+ K G +L +V+ + LM G+ PN V+YN +I+ CK+G L A+
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNR--LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAK 825
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
E+ M A P+V TY +L++GY + G E + DE + G+ P+ ++Y+ I+
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAI-----LTEGLCRNGYLTEALKLHNQILKFD 420
+ G +A ++ M K+ D +I L G + G + A K+ +++
Sbjct: 886 LKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Query: 421 LIEDAFSLNILLNYICKS 438
I D+ ++ L+N C S
Sbjct: 946 YIPDSATVIELINESCIS 963
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 150/572 (26%), Positives = 262/572 (45%), Gaps = 45/572 (7%)
Query: 114 LMRNLIAKEGIAPLELLEALMDESYQHCPA-VFDALVRACTQVGATEGAYDVICELRTRG 172
++R L + ++ L M HC +F +++ QVG E A ++ ++ G
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141
Query: 173 CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAI 232
C SV +N+ L L+ N I + +Y+ M G NV T+N+ + ALCK +V A
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201
Query: 233 TVIYRMLKDGTFPNVVS------------------------------FNMIIDGACKTGS 262
++ M G P+ VS +N +I+G CK
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHD 261
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
A ++M++ M + PN +SY+++IN C G + LA L M+K G P++ T
Sbjct: 262 YKGAFELMRE---MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318
Query: 323 YATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
++L+ G G+ ++L L ++M+ GL PN+V YN+++ HG++ +A V S M
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 441
+ P+ +Y L G + G L A+ + N++L + ++ +C+
Sbjct: 379 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 442 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ----PNLTI 497
M P V T I G C G + A +++ +M++Q PN+
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR---QMEQQHRCPPNIVT 495
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK 556
YN ++GL K + A L E+ R + ++T+NTL+ G N+G A L +M
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI--MQGIRPDCITYTTLITHFNKKHH 614
G S + +T N +I CK G E A +++ ++ + RPD I+YT +I + +
Sbjct: 556 VDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNC 615
Query: 615 PEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
E+ + L + MI G++P T+ ++ F+L
Sbjct: 616 REDGVILLERMISAGIVPSIATWSVLINCFIL 647
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/567 (25%), Positives = 278/567 (49%), Gaps = 19/567 (3%)
Query: 87 LFPHSLHSSCTLLQVLVNSRWFTE--ALSLMRNLIAKEGIAPLEL--LEALMDES-YQHC 141
L P L+++ + +L S E L +++ L +E PL L +++ + + ++H
Sbjct: 17 LIPFVLNTNLNVNHLLTESPNHAEIKELDVVKRL-RQESCVPLALHFFKSIANSNLFKHT 75
Query: 142 PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYK 201
P F+ ++R G + ++ +++ +G S + + +S +V +R ++
Sbjct: 76 PLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFY 135
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYR-MLKDGTFPNVVSFNMIIDGACKT 260
+ FG +V +N + L E R+ + I ++YR M +DG PNV ++N+++ CK
Sbjct: 136 RIKEFGCDPSVKIYNHVLDTLLGENRI-QMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 261 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 320
+D A K++ + M+ P++VSY ++I+ C+ G L +E G + FEP V
Sbjct: 195 NKVDGAKKLLVE---MSNKGCCPDAVSYTTVISSMCEVG---LVKE--GRELAERFEPVV 246
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
Y LI+G + + + L EMVE+G+ PN++ Y++++ L G +E A L+
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK-FDLIEDAFSLNILLNYICKSX 439
M+ + P+ Y+ + L +G G +AL L NQ+++ F L + + N L+ C
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
M G P++ T ++I+G K G+ + A+ ++N M+ PN+ +Y
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 500 SFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSL 558
+ + LC+ + A++L++ + K + TFN I G ++G++D A + +M+
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 559 -GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
N VTYN L++ L K EEA L + + M+G+ TY TL+ P
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI 546
Query: 618 VIALHDYMILKGVIPDQKTYDAIVTPF 644
+ L M++ G PD+ T + I+ +
Sbjct: 547 ALQLVGKMMVDGKSPDEITMNMIILAY 573
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 164/648 (25%), Positives = 291/648 (44%), Gaps = 95/648 (14%)
Query: 2 FLTSIPFKFRSIFFRAFHAGKRFSNPTAAAEDIIFRAICVHLKHRRWSALEQLSPKLTTF 61
F I F + I FR F G F R + L+H +E++ +L +
Sbjct: 18 FYKEILFGMKKIGFREFLHGYHF------------RGLVSELRHVH---VEEIMDELMS- 61
Query: 62 MVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLI 119
S L++ F+ + + F HS S+ + VL R F E ++ L+
Sbjct: 62 ----------ESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLL 111
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
+EG ++ V+D L+ +++ + + ++ +++ + VS +
Sbjct: 112 QEEGTF----------RKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQS 161
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+N+ L H E D+ W +YK +
Sbjct: 162 YNSVLYHFRET---DKMWDVYKE------------------------------------I 182
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
KD N +++ ++DG C+ L+ A+ ++ + P+ VS+NSI++G+CK G
Sbjct: 183 KD---KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEW---KDIGPSVVSFNSIMSGYCKLG 236
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
+ +A+ ++K G PSV ++ LI+G GS+ E+L L +M + G+ P+ V YN
Sbjct: 237 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
+ + G + A +V+ DM+DK + PD +Y IL G C+ G + L +L
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL-----VLLK 351
Query: 420 DLIEDAFSLN------ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
D++ F LN ++L+ +CK+ M GL PD+ + VI G CKL
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTF 532
G + AL LY+ M PN + + + GLC+ A++L+D L + LD +
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
N +I GY+ SG I+EA L + G++ + T+N+LI CK EA++++ ++ +
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531
Query: 593 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
G+ P ++YTTL+ + + + + L M +G+ P TY I
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 226/518 (43%), Gaps = 23/518 (4%)
Query: 142 PAV--FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRL 199
P+V F++++ ++G + A C + G + SV++ N ++ L V I L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 200 YKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACK 259
M G + T+N+ + A VI ML G P+V+++ +++ G C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 260 TGSLDLALKVMKKMNLMTG---NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 316
G++D+ L ++K M L G NS+ P SV +++G CK G + A + M G
Sbjct: 340 LGNIDMGLVLLKDM-LSRGFELNSIIPCSV----MLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
P + Y+ +I G + G + +L L DEM ++ + PN + ++L L + G + EA
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 436
+L +I D Y I+ +G ++G + EAL+L +++ + + N L+ C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
K+ + GL P V + T++D GNT+ L M P
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 497 IYNSFINGLCKMASTD----VAKNLVDELRKRKLLD---------ATTFNTLISGYSNSG 543
Y+ GLC+ + V + + E K+ L D T+NT+I
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
+ AF MKS L A+ TYN LI+ LC G +A + + Q + YT
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 604 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
TLI K PE + L ++ +G + Y A++
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 220/501 (43%), Gaps = 52/501 (10%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
LEL + + ++ L + +G GA++VI ++ +G V + L
Sbjct: 277 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 336
Query: 187 LVEVNDIDRFWRLYKGMGSFG-HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFP 245
++ +ID L K M S G + ++ ++ + LCK R+ EA+++ +M DG P
Sbjct: 337 QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSP 396
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
++V+++++I G CK G D+AL + +M + PNS ++ +++ G C+KG LL A
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEM---CDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
+L ++ +G + Y +IDGYA+ G +EE+L L ++E G+ P++ +NS++Y
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ ++ EA K+L + + P SY L + G +L +
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRRE---------- 563
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC---KLGNTEKALR- 481
M G+PP T + + G C K N LR
Sbjct: 564 -------------------------MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 482 -----LYNGMIKMDEQ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTF 532
G+ M+ + P+ YN+ I LC++ A ++ ++ R L + T+
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
N LI G I +A ++ +S ++ Y TLI C G E A +L ++
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718
Query: 593 QGIRPDCITYTTLITHFNKKH 613
+G Y+ +I ++H
Sbjct: 719 RGFNVSIRDYSAVINRLCRRH 739
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 164/648 (25%), Positives = 291/648 (44%), Gaps = 95/648 (14%)
Query: 2 FLTSIPFKFRSIFFRAFHAGKRFSNPTAAAEDIIFRAICVHLKHRRWSALEQLSPKLTTF 61
F I F + I FR F G F R + L+H +E++ +L +
Sbjct: 18 FYKEILFGMKKIGFREFLHGYHF------------RGLVSELRHVH---VEEIMDELMS- 61
Query: 62 MVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLI 119
S L++ F+ + + F HS S+ + VL R F E ++ L+
Sbjct: 62 ----------ESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLL 111
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
+EG ++ V+D L+ +++ + + ++ +++ + VS +
Sbjct: 112 QEEGTF----------RKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQS 161
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+N+ L H E D+ W +YK +
Sbjct: 162 YNSVLYHFRET---DKMWDVYKE------------------------------------I 182
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
KD N +++ ++DG C+ L+ A+ ++ + P+ VS+NSI++G+CK G
Sbjct: 183 KD---KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEW---KDIGPSVVSFNSIMSGYCKLG 236
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
+ +A+ ++K G PSV ++ LI+G GS+ E+L L +M + G+ P+ V YN
Sbjct: 237 FVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
+ + G + A +V+ DM+DK + PD +Y IL G C+ G + L +L
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL-----VLLK 351
Query: 420 DLIEDAFSLN------ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
D++ F LN ++L+ +CK+ M GL PD+ + VI G CKL
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTF 532
G + AL LY+ M PN + + + GLC+ A++L+D L + LD +
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
N +I GY+ SG I+EA L + G++ + T+N+LI CK EA++++ ++ +
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531
Query: 593 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
G+ P ++YTTL+ + + + + L M +G+ P TY I
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 226/518 (43%), Gaps = 23/518 (4%)
Query: 142 PAV--FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRL 199
P+V F++++ ++G + A C + G + SV++ N ++ L V I L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 200 YKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACK 259
M G + T+N+ + A VI ML G P+V+++ +++ G C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 260 TGSLDLALKVMKKMNLMTG---NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 316
G++D+ L ++K M L G NS+ P SV +++G CK G + A + M G
Sbjct: 340 LGNIDMGLVLLKDM-LSRGFELNSIIPCSV----MLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
P + Y+ +I G + G + +L L DEM ++ + PN + ++L L + G + EA
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 436
+L +I D Y I+ +G ++G + EAL+L +++ + + N L+ C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
K+ + GL P V + T++D GNT+ L M P
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 497 IYNSFINGLCKMASTD----VAKNLVDELRKRKLLD---------ATTFNTLISGYSNSG 543
Y+ GLC+ + V + + E K+ L D T+NT+I
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
+ AF MKS L A+ TYN LI+ LC G +A + + Q + YT
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 604 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
TLI K PE + L ++ +G + Y A++
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 220/501 (43%), Gaps = 52/501 (10%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
LEL + + ++ L + +G GA++VI ++ +G V + L
Sbjct: 277 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCG 336
Query: 187 LVEVNDIDRFWRLYKGMGSFG-HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFP 245
++ +ID L K M S G + ++ ++ + LCK R+ EA+++ +M DG P
Sbjct: 337 QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSP 396
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
++V+++++I G CK G D+AL + +M + PNS ++ +++ G C+KG LL A
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEM---CDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
+L ++ +G + Y +IDGYA+ G +EE+L L ++E G+ P++ +NS++Y
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ ++ EA K+L + + P SY L + G +L +
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRRE---------- 563
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC---KLGNTEKALR- 481
M G+PP T + + G C K N LR
Sbjct: 564 -------------------------MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 482 -----LYNGMIKMDEQ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTF 532
G+ M+ + P+ YN+ I LC++ A ++ ++ R L + T+
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
N LI G I +A ++ +S ++ Y TLI C G E A +L ++
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718
Query: 593 QGIRPDCITYTTLITHFNKKH 613
+G Y+ +I ++H
Sbjct: 719 RGFNVSIRDYSAVINRLCRRH 739
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 160/618 (25%), Positives = 279/618 (45%), Gaps = 47/618 (7%)
Query: 57 KLTTFMVNRVVSEFHNSPHLALDF--YNWVGMLFPH---SLHSSCTLLQVLVNSRWFTEA 111
KL++ + VVS F S H+ F + V FP S++ LL+ + R E
Sbjct: 74 KLSSLL--SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERR-VEF 130
Query: 112 LSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTR 171
+S + + GIAP ++Y F+ L+RA + A ++ E+ +
Sbjct: 131 VSWLYKDMVLCGIAP---------QTY-----TFNLLIRALCDSSCVDAARELFDEMPEK 176
Query: 172 GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEA 231
GC + + + + D+ L M SFG + N +N + + C+E R ++
Sbjct: 177 GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDS 236
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSV-WPNSVSYNS 290
++ +M ++G P++V+FN I CK G + A ++ M L + PNS++YN
Sbjct: 237 EKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNL 296
Query: 291 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
++ GFCK G L A+ + + + S+++Y + G R G E+ + +M ++G
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
+ P+I YN ++ L + G + +A ++ M +CPD +Y L G C G + A
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAK 416
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
L ++++ + + +A++ NILL+ + K M +G D T ++DG
Sbjct: 417 SLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476
Query: 471 CKLGNTEKALRLYNGM-----------------------IKMDEQPNLTIYNSFINGLCK 507
C G +KA+ + GM I+ + P+L Y++ +NGLCK
Sbjct: 477 CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCK 536
Query: 508 MASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
AKNL E+ KL D+ +N I + G+I AF + +M+ G + T
Sbjct: 537 AGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLET 596
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 626
YN+LI L E LM M +GI P+ TY T I + + E+ L D M+
Sbjct: 597 YNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMM 656
Query: 627 LKGVIPDQKTYDAIVTPF 644
K + P+ ++ ++ F
Sbjct: 657 QKNIAPNVFSFKYLIEAF 674
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 142/631 (22%), Positives = 243/631 (38%), Gaps = 129/631 (20%)
Query: 125 APLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFL 184
A EL + + ++ + F LVR + G T+ +++ + + G L + +N +
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 185 SHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF 244
S D ++ + M G V ++ TFN I ALCKE +V++A + M D
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 245 ----PNVVSFNMIIDGACKTGSLDLA------------LKVMKKMNL------------- 275
PN +++N+++ G CK G L+ A L ++ N+
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 276 -------MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 328
MT + P+ SYN +++G CK G L A+ ++G M + G P TY L+
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLH 404
Query: 329 GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 388
GY G ++ + L EM+ PN N +L+ L++ G + EA ++L M +K
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 389 DQYSYAILTEGLCRNGYLTEALKL-----------------------HNQILKFDLIEDA 425
D + I+ +GLC +G L +A+++ + +++ + + D
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
+ + LLN +CK+ M+ L PD I CK G A R+
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 486 MIK-----------------------------MDE------QPNLTIYNSFINGLCKMAS 510
M K MDE PN+ YN+ I LC+
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Query: 511 TDVAKNLVDELRKRKLL-DATTFNTLISGYSN---------------------------- 541
+ A NL+DE+ ++ + + +F LI +
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLM 704
Query: 542 ------SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 595
+GQ+ +A L + G Y L+ LCK E A ++ MI +G
Sbjct: 705 FNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Query: 596 RPDCITYTTLITHFNKKHHPEEVIALHDYMI 626
D +I K + +E + D M+
Sbjct: 765 GFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 202/507 (39%), Gaps = 101/507 (19%)
Query: 91 SLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAP-LELLEALMD-------------- 135
SL S LQ LV F EA ++++ + K GI P + LMD
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDK-GIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 136 ----ESYQHCP--AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVE 189
+ CP + L+ VG + A ++ E+ CL + + N L L +
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 190 VNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM----------- 238
+ I L + M G+ + T N+ + LC + +AI ++ M
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 239 ------------LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
+++ P++++++ +++G CK G A + +M G + P+SV
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM---MGEKLQPDSV 560
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
+YN I+ FCK+G + A VL DM K G S+ TY +LI G + E L DEM
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR---- 402
E+G+ PNI YN+ + +L +E+A+ +L +M+ K+I P+ +S+ L E C+
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF 680
Query: 403 ------------------------------NGYLTEALKLHNQILKFDLIEDAFSLNILL 432
G L +A +L +L F L+
Sbjct: 681 DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLV 740
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
+CK MI RG D VIDG K+GN ++A
Sbjct: 741 ESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA------------- 787
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVD 519
NSF + + +MAS N VD
Sbjct: 788 ------NSFADKMMEMASVGEVANKVD 808
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 27/321 (8%)
Query: 71 HNSPHLALDFYNWVGMLFPHSLHSSC--------TLLQVLVNSRWFTEALSLMRNLIAKE 122
H S L +++G++ + ++C TLL L + F EA +NL A+
Sbjct: 495 HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA----KNLFAE- 549
Query: 123 GIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNN 182
+M E Q ++ + + G A+ V+ ++ +GC S+ +N+
Sbjct: 550 ----------MMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 183 FLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDG 242
+ L N I L M G N+ T+N AI LC+ +V +A ++ M++
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 243 TFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL 302
PNV SF +I+ CK D+A +V + + G S+ +N ++ G LL
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAA----GQLL 715
Query: 303 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
A E+L ++ GFE Y L++ + LE + + +M++RG + ++
Sbjct: 716 KATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVI 775
Query: 363 YWLYRHGDMEEASKVLSDMID 383
L + G+ +EA+ M++
Sbjct: 776 DGLGKMGNKKEANSFADKMME 796
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 207/405 (51%), Gaps = 4/405 (0%)
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M GH + T N + LC +V +A+ +I RM++ G PN V++ ++ CK+G
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
LA+++++KM + ++V Y+ II+G CK G L A + +M GF+ +
Sbjct: 228 TALAMELLRKME---ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
Y TLI G+ G ++ +L +M++R + P++V +++++ + G + EA ++ +MI
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
+ I PD +Y L +G C+ L +A + + ++ + + NIL+N CK+
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M RG+ D T T+I G C+LG E A L+ M+ +P++ Y +
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 503 NGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+GLC + A + +++ K K+ LD +N +I G N+ ++D+A+ L + G+
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
+ TYN +I LCK G EA L + M G P+ TY LI
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 225/450 (50%), Gaps = 7/450 (1%)
Query: 200 YKGMGS---FGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDG 256
+ MG G+ + TF+ I LC E RV EA+ ++ RM++ G P +++ N +++G
Sbjct: 127 FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Query: 257 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 316
C G + A+ ++ +M + TG PN V+Y ++ CK G LA E+L M +
Sbjct: 187 LCLNGKVSDAVLLIDRM-VETG--FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI 243
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
+ Y+ +IDG + GSL+ + L +EM +G +I++Y +++ G ++ +K
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 436
+L DMI + I PD +++ L + + G L EA +LH ++++ + D + L++ C
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
K M+++G P++ T +I+G CK + L L+ M +
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 497 IYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEM 555
YN+ I G C++ +VAK L E+ R++ D ++ L+ G ++G+ ++A + ++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 556 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 615
+ + + YN +I+ +C ++A +L + ++G++PD TY +I KK
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 616 EEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
E L M G P+ TY+ ++ L
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 208/436 (47%), Gaps = 39/436 (8%)
Query: 242 GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 301
G N+ + +++I+ C+ L LA M K+ + P++V+++++ING C +G +
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL---GYEPDTVTFSTLINGLCLEGRV 158
Query: 302 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 361
A E++ MV+ G +P++ T L++G G + +++ L D MVE G PN V Y +
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 362 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
L + + G A ++L M ++ I D Y+I+ +GLC++G L A L N++
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 422 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 481
D L+ C + MI R + PDV + +ID K G +A
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 482 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYS 540
L+ MI+ P+ Y S I+G CK D A +++D + + + TFN LI+GY
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 600
+ ID+ L +M G+ A+ VTYNTLI C+ G E AKEL + M+ + +RPD +
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 601 TYTTLITHFNKKHHPEEV---------------IALHDYMI------------------- 626
+Y L+ PE+ I +++ +I
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 627 -LKGVIPDQKTYDAIV 641
LKGV PD KTY+ ++
Sbjct: 519 PLKGVKPDVKTYNIMI 534
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/478 (25%), Positives = 224/478 (46%), Gaps = 18/478 (3%)
Query: 137 SYQHCPAVFDALVRACTQVGATEGAYDVI---CELRTRGCLVSVHAWNNFLSHLVEVND- 192
Y+ F L+ G A +++ E+ + L++++A N L +V+D
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 193 ---IDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVS 249
IDR M G N T+ + +CK + A+ ++ +M + + V
Sbjct: 197 VLLIDR-------MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
+++IIDG CK GSLD A + +M + + + Y ++I GFC G ++L
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEI---KGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
DM+K P V ++ LID + + G L E+ L EM++RG+ P+ V Y S++ +
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
+++A+ +L M+ K P+ ++ IL G C+ + + L+L ++ ++ D + N
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
L+ C+ M++R + PD+ + ++DG C G EKAL ++ + K
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 548
+ ++ IYN I+G+C + D A +L L + + D T+N +I G G + EA
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
L +M+ G S N TYN LI G ++ +L++ + G D T ++
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 209/422 (49%), Gaps = 5/422 (1%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
L++ +++ +Q + +++ + G T A +++ ++ R + ++ + L
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ +D + L+ M G ++ + I C R + ++ M+K P+VV
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
+F+ +ID K G L A ++ K+M + P++V+Y S+I+GFCK+ L A +L
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEM---IQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
MV G P++RT+ LI+GY + +++ L L +M RG+ + V YN+++
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
G +E A ++ +M+ + + PD SY IL +GLC NG +AL++ +I K + D
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
NI+++ +C + S+ +G+ PDV T +I G CK G+ +A L+ M +
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 547
PN YN I + L++E+++ +DA+T ++ S+ G++ +
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLKK 614
Query: 548 AF 549
+F
Sbjct: 615 SF 616
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 192/416 (46%), Gaps = 39/416 (9%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
+A+ + M + P ++ F+ + +T DL L + K+M L + N + +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMEL---KGIAHNLYTLS 111
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
+IN C+ L LA +G ++K G+EP T++TLI+G G + E+L L D MVE
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G P ++ N+ L GLC NG +++A
Sbjct: 172 GHKPTLITLNA-----------------------------------LVNGLCLNGKVSDA 196
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
+ L +++++ + + +L +CKS M R + D + +IDG
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-D 528
CK G+ + A L+N M + ++ IY + I G C D L+ ++ KRK+ D
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
F+ LI + G++ EA L EM G+S + VTY +LI+ CK ++A ++
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+M+ +G P+ T+ LI + K + ++ + L M L+GV+ D TY+ ++ F
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 169/345 (48%), Gaps = 1/345 (0%)
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A ++ +M ++ P + ++ L AR + L LC +M +G+ N+ + ++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
R + A + +I PD +++ L GLC G ++EAL+L +++++
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
+LN L+N +C + M+ G P+ T V+ CK G T A+ L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNS 542
M + + + Y+ I+GLCK S D A NL +E+ + D + TLI G+ +
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
G+ D+ L +M ++ + V ++ LI+ K G EA+EL K MI +GI PD +TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
T+LI F K++ ++ + D M+ KG P+ +T++ ++ + A
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 15/338 (4%)
Query: 321 RTYATLIDGYARWGSLEESLR-------------LCDEMVERGLFPNIVVYNSILYWLYR 367
R ++++ DG + S E LR L EM P ++ ++ + + R
Sbjct: 26 RVFSSVSDGKGKV-SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVAR 84
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
+ + M K I + Y+ +I+ CR L+ A +I+K D +
Sbjct: 85 TKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVT 144
Query: 428 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
+ L+N +C M+ G P + T +++G C G A+ L + M+
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 546
+ QPN Y + +CK T +A L+ ++ +RK+ LDA ++ +I G G +D
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 547 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
AF L EM+ G A+ + Y TLI C G ++ +L++ MI + I PD + ++ LI
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 607 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
F K+ E LH MI +G+ PD TY +++ F
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 227/452 (50%), Gaps = 11/452 (2%)
Query: 195 RFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
R W+L G+ + TF+ + C E RV EA+ ++ RM++ P++V+ + +I
Sbjct: 130 RAWKL-------GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
+G C G + AL ++ +M P+ V+Y ++N CK G LA ++ M +
Sbjct: 183 NGLCLKGRVSEALVLIDRM---VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
+ SV Y+ +ID + GS +++L L +EM +G+ ++V Y+S++ L G ++
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
+K+L +MI ++I PD +++ L + + G L EA +L+N+++ + D + N L++
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
CK M+++G PD+ T + +I+ CK + +RL+ + PN
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTT 553
YN+ + G C+ + AK L E+ R + + T+ L+ G ++G++++A +
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
+M+ ++ YN +I+ +C ++A L + +G++PD +TY +I KK
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Query: 614 HPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
E L M G PD TY+ ++ L
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHL 571
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 201/421 (47%), Gaps = 39/421 (9%)
Query: 225 ECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPN 284
+ +V +AI + M++ P + FN + +T DL L K M L N + +
Sbjct: 48 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMEL---NGIEHD 104
Query: 285 SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD 344
+ +IN +C+K LL A VLG K G+EP T++TL++G+ G + E++ L D
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
MVE P++V ++++ L G + EA ++ M++ PD+ +Y + LC++G
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
N L DL M R + V +
Sbjct: 225 ---------NSALALDLFR--------------------------KMEERNIKASVVQYS 249
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
VID CK G+ + AL L+N M + ++ Y+S I GLC D ++ E+ R
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 525 KLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
++ D TF+ LI + G++ EA L EM + G++ + +TYN+LI+ CK C EA
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 643
++ +M+ +G PD +TY+ LI + K ++ + L + KG+IP+ TY+ +V
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 644 F 644
F
Sbjct: 430 F 430
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 214/487 (43%), Gaps = 53/487 (10%)
Query: 138 YQHCPAVFDALVRA-CTQVGATEGA--YDVICELRTRGCLVSVHAWNNFLSHLVEVND-- 192
Y+ F LV C + +E D + E++ R LV+V N L V++
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 193 --IDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSF 250
IDR M +G + T+ + LCK A+ + +M + +VV +
Sbjct: 196 VLIDR-------MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
+++ID CK GS D AL + +M + + + V+Y+S+I G C G ++L +
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEM---KGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
M+ P V T++ LID + + G L E+ L +EM+ RG+ P+ + YNS++ +
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
+ EA+++ M+ K PD +Y+IL C+ + + ++L +I LI + + N
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
L+ C+S M++RG+PP V T ++DG C G KAL ++ M K
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA- 548
+ IYN I+G+C + D A +L L + + D T+N +I G G + EA
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 549 ----------------------------------FGLTTEMKSLGLSANRVTYNTLINLL 574
L EMK G SA+ T +I++L
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Query: 575 CKNGCDE 581
D+
Sbjct: 606 SDRRLDK 612
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 163/345 (47%), Gaps = 1/345 (0%)
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A ++ M+++ P+ + L AR + L C M G+ ++ ++
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
R + A VL PD +++ L G C G ++EA+ L +++++
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
D +++ L+N +C M+ G PD T V++ CK GN+ AL L+
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNS 542
M + + + ++ Y+ I+ LCK S D A +L +E+ + + D T+++LI G N
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
G+ D+ + EM + + VT++ LI++ K G EAKEL MI +GI PD ITY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
+LI F K++ E + D M+ KG PD TY ++ + A
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 167/374 (44%), Gaps = 32/374 (8%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
L+L + + + + + ++ + + G+ + A + E+ +G V +++ +
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L D ++ + M + +V TF+ I KE +++EA + M+ G P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 247 VVSFNMIIDGACKTGSL-------DL----------------------ALKVMKKMNL-- 275
+++N +IDG CK L DL A +V M L
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 276 -MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
++ + PN+++YN+++ GFC+ G L A+E+ +MV G PSV TY L+DG G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
L ++L + ++M + + I +YN I++ + +++A + + DK + PD +Y
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
++ GLC+ G L+EA L ++ + D F+ NIL+ M
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Query: 455 GLPPDVYTKATVID 468
G D T VID
Sbjct: 590 GFSADSSTIKMVID 603
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 160/630 (25%), Positives = 288/630 (45%), Gaps = 69/630 (10%)
Query: 71 HNSPHLALDFYNWV---------GMLFPHSLHSSCTLLQVLVNS-RWFTEALSLMRNLIA 120
N+P AL FYNW G +F L+ +LV+S + A L+ ++
Sbjct: 83 RNNPEAALRFYNWARPWRGSFEDGDVF-------WVLIHILVSSPETYGRASDLLIRYVS 135
Query: 121 KEGIAPLE--LLEALMDES----YQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCL 174
P+ L+ L+D + ++ F+ L+ A ++ T+ A D++ ++ +
Sbjct: 136 TSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVI 195
Query: 175 VSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITV 234
N LS LV+ N + LY M + G + T L + A +E + EA+ V
Sbjct: 196 PFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEV 255
Query: 235 IYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA---LKVMKKMNLMTGNSVWPNSVSYNSI 291
+ R ++ G P+ + +++ + CKT L +A L+ MK+ L P+ +Y S+
Sbjct: 256 LSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCV-----PSQETYTSV 310
Query: 292 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
I K+G + A + +M+ G +V +LI G+ + L +L L D+M + G
Sbjct: 311 ILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP 370
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
PN V ++ ++ W ++G+ME+A + M + P + + +G + EALK
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV----------- 460
L ++ + L + F N +L+++CK M +RG+ P+V
Sbjct: 431 LFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 461 ------------------------YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
YT + +IDG + + + AL + N M + + N
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 497 IYNSFINGLCKMASTDVAKNLVDEL--RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTE 554
+Y + INGLCK+ T A+ L+ + KR + ++N++I G+ G++D A E
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
M G+S N +TY +L+N LCKN ++A E+ M +G++ D Y LI F K+ +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 615 PEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
E AL ++ +G+ P Q Y+++++ F
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGF 699
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 223/453 (49%), Gaps = 6/453 (1%)
Query: 192 DIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFN 251
++++ YK M G +V + I K + EA+ + + G NV N
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCN 447
Query: 252 MIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 311
I+ CK G D A +++ KM + PN VSYN+++ G C++ + LA V ++
Sbjct: 448 TILSWLCKQGKTDEATELLSKME---SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 312 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 371
++ G +P+ TY+ LIDG R + +L + + M + N VVY +I+ L + G
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 372 EEASKVLSDMID-KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
+A ++L++MI+ K +C SY + +G + G + A+ + ++ + + +
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
L+N +CK+ M +G+ D+ +IDG CK N E A L++ +++
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 549
P+ IYNS I+G + + A +L ++ K L D T+ TLI G G + A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 550 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
L TEM+++GL + + Y ++N L K G + ++ + M + P+ + Y +I
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
++ + +E LHD M+ KG++PD T+D +V+
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/532 (27%), Positives = 256/532 (48%), Gaps = 8/532 (1%)
Query: 114 LMRNLIAKEGIA-PLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRG 172
LMR + +E A LE+L ++ + ++ V+AC + A ++ E++ +
Sbjct: 239 LMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK 298
Query: 173 -CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEA 231
C+ S + + + V+ ++D RL M S G NV I CK +V A
Sbjct: 299 LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSA 358
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSI 291
+ + +M K+G PN V+F+++I+ K G ++ AL+ KKM ++ + P+ ++I
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL---GLTPSVFHVHTI 415
Query: 292 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
I G+ K A ++ + + G +V T++ + G +E+ L +M RG+
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
PN+V YN+++ R +M+ A V S++++K + P+ Y+Y+IL +G RN AL+
Sbjct: 475 GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI-TRGLPPDVYTKATVIDGN 470
+ N + ++ + ++N +CK +MI + L + ++IDG
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDA 529
K G + A+ Y M PN+ Y S +NGLCK D A + DE++ + + LD
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI 654
Query: 530 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 589
+ LI G+ ++ A L +E+ GL+ ++ YN+LI+ G A +L K
Sbjct: 655 PAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 590 MIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
M+ G+R D TYTTLI K + L+ M G++PD+ Y IV
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 212/442 (47%), Gaps = 12/442 (2%)
Query: 209 VENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALK 268
V + T+ I A K+ + +AI + ML DG NVV+ +I G CK L AL
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 269 VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 328
+ KM G S PNSV+++ +I F K G + A E M G PSV T+I
Sbjct: 361 LFDKME-KEGPS--PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 329 GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 388
G+ + EE+L+L DE E GL N+ V N+IL WL + G +EA+++LS M + I P
Sbjct: 418 GWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 448
+ SY + G CR + A + + IL+ L + ++ +IL++ ++
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI----YNSFING 504
M + + + T+I+G CK+G T KA L MI E+ L + YNS I+G
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI---EEKRLCVSCMSYNSIIDG 593
Query: 505 LCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
K D A +E+ + + T+ +L++G + ++D+A + EMK+ G+ +
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 623
Y LI+ CK E A L ++ +G+ P Y +LI+ F + + L+
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 624 YMILKGVIPDQKTYDAIVTPFL 645
M+ G+ D TY ++ L
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLL 735
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 230/495 (46%), Gaps = 32/495 (6%)
Query: 52 EQLSPKLTTFMVNRVVSEFHNSPHL--ALDFYNWVGML--FPHSLHSSCTLLQVLVNSRW 107
E SP TF V ++ F + + AL+FY + +L P H T++Q + +
Sbjct: 368 EGPSPNSVTFSV--LIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH-TIIQGWLKGQK 424
Query: 108 FTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPA---VFDALVRACTQVGATEGAYDV 164
EAL L DES++ A V + ++ + G T+ A ++
Sbjct: 425 HEEALKLF-------------------DESFETGLANVFVCNTILSWLCKQGKTDEATEL 465
Query: 165 ICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCK 224
+ ++ +RG +V ++NN + ++D ++ + G N T+++ I +
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR 525
Query: 225 ECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPN 284
A+ V+ M N V + II+G CK G A +++ N++ + +
Sbjct: 526 NHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA--NMIEEKRLCVS 583
Query: 285 SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD 344
+SYNSII+GF K+G + A +M G P+V TY +L++G + ++++L + D
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
EM +G+ +I Y +++ + +ME AS + S+++++ + P Q Y L G G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
+ AL L+ ++LK L D + L++ + K M GL PD
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
+++G K G K ++++ M K + PN+ IYN+ I G + + D A L DE+ +
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 525 KLL-DATTFNTLISG 538
+L D TF+ L+SG
Sbjct: 824 GILPDGATFDILVSG 838
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 147/311 (47%), Gaps = 35/311 (11%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICEL--RTRGCLVSVHAWNNFL 184
LE++ + + + V+ ++ +VG T A +++ + R C VS ++N+ +
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC-VSCMSYNSII 591
Query: 185 SHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF 244
+ ++D Y+ M G NV T+ + LCK R+ +A+ + M G
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKM-------------NLMTGNSVWPNSV----- 286
++ ++ +IDG CK +++ A + ++ +L++G N V
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711
Query: 287 --------------SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 332
+Y ++I+G K G L+LA E+ +M G P Y +++G ++
Sbjct: 712 YKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
G + +++ +EM + + PN+++YN+++ YR G+++EA ++ +M+DK I PD +
Sbjct: 772 KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGAT 831
Query: 393 YAILTEGLCRN 403
+ IL G N
Sbjct: 832 FDILVSGQVGN 842
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 224/450 (49%), Gaps = 7/450 (1%)
Query: 200 YKGMGS---FGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDG 256
+ MG G+ N TF+ I LC E RV EA+ ++ RM++ G P++++ N +++G
Sbjct: 143 FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNG 202
Query: 257 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 316
C +G A+ ++ KM PN+V+Y ++N CK G LA E+L M +
Sbjct: 203 LCLSGKEAEAMLLIDKM---VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
+ Y+ +IDG + GSL+ + L +EM +G+ NI+ YN ++ G ++ +K
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 436
+L DMI + I P+ ++++L + + G L EA +LH +++ + D + L++ C
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
K M+++G P++ T +I+G CK + L L+ M +
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 497 IYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEM 555
YN+ I G C++ +VAK L E+ RK+ + T+ L+ G ++G+ ++A + ++
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 556 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 615
+ + + YN +I+ +C ++A +L + ++G++P TY +I KK
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 616 EEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
E L M G PD TY+ ++ L
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 209/409 (51%), Gaps = 4/409 (0%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L M GH ++ T N + LC + EA+ +I +M++ G PN V++ +++ C
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K+G LA+++++KM ++ ++V Y+ II+G CK G L A + +M G
Sbjct: 240 KSGQTALAMELLRKME---ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
++ TY LI G+ G ++ +L +M++R + PN+V ++ ++ + G + EA ++
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
+MI + I PD +Y L +G C+ +L +A ++ + ++ + + NIL+N CK+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
M RG+ D T T+I G C+LG A L+ M+ PN+ Y
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
++GLC ++ A + +++ K K+ LD +N +I G N+ ++D+A+ L +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
G+ TYN +I LCK G EA+ L + M G PD TY LI
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 229/469 (48%), Gaps = 4/469 (0%)
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
L +V ++ S + + D L K M G N+ T ++ I C+ ++ A +
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 144
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
+ +++K G PN ++F+ +I+G C G + AL+++ +M M P+ ++ N+++N
Sbjct: 145 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK---PDLITINTLVN 201
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
G C G A ++ MV+ G +P+ TY +++ + G ++ L +M ER +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
+ V Y+ I+ L +HG ++ A + ++M K I + +Y IL G C G + KL
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
++K + + + ++L++ K MI RG+ PD T ++IDG CK
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTF 532
+ +KA ++ + M+ PN+ +N ING CK D L ++ R ++ D T+
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
NTLI G+ G+++ A L EM S + N VTY L++ LC NG E+A E+ + +
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 593 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ D Y +I ++ L + LKGV P KTY+ ++
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 205/449 (45%), Gaps = 41/449 (9%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
+AI + M+ P V+ F+ + KT DL L + K+M L + N + +
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL---KGIAHNLYTLS 127
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC------ 343
+IN FC+ L LA +G ++K G+EP+ T++TLI+G G + E+L L
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 344 -----------------------------DEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
D+MVE G PN V Y +L + + G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
++L M +++I D Y+I+ +GLC++G L A L N++ + + + NIL+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
C + MI R + P+V T + +ID K G +A L+ MI P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT--TFNTLISGYSNSGQIDEAFGLT 552
Y S I+G CK D A +VD L K D TFN LI+GY + +ID+ L
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVD-LMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
+M G+ A+ VTYNTLI C+ G AKEL + M+ + + P+ +TY L+
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 613 HHPEEVIALHDYMILKGVIPDQKTYDAIV 641
E+ + + + + + D Y+ I+
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIII 515
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 204/409 (49%), Gaps = 4/409 (0%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L M +G N T+ + +CK + A+ ++ +M + + V +++IIDG C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K GSLD A + +M + + N ++YN +I GFC G ++L DM+K P
Sbjct: 275 KHGSLDNAFNLFNEMEM---KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+V T++ LID + + G L E+ L EM+ RG+ P+ + Y S++ + +++A++++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
M+ K P+ ++ IL G C+ + + L+L ++ ++ D + N L+ C+
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
M++R +PP++ T ++DG C G +EKAL ++ + K + ++ IY
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKS 557
N I+G+C + D A +L L + + T+N +I G G + EA L +M+
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
G + + TYN LI +G ++ +L++ + G D T +I
Sbjct: 572 DGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 215/433 (49%), Gaps = 6/433 (1%)
Query: 118 LIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSV 177
L KE A L L++ +++ Q + ++ + G T A +++ ++ R +
Sbjct: 205 LSGKEAEAML-LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 178 HAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYR 237
++ + L + +D + L+ M G N+ T+N+ I C R + ++
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
M+K PNVV+F+++ID K G L A ++ K+M + P++++Y S+I+GFCK
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM---IHRGIAPDTITYTSLIDGFCK 380
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
+ L A +++ MV G +P++RT+ LI+GY + +++ L L +M RG+ + V
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
YN+++ G + A ++ +M+ + + P+ +Y IL +GLC NG +AL++ +I
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
K + D NI+++ +C + S+ +G+ P V T +I G CK G
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLI 536
+A L+ M + P+ YN I + L++EL++ +DA+T +I
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Query: 537 SGYSNSGQIDEAF 549
S+ G++ ++F
Sbjct: 621 DMLSD-GRLKKSF 632
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 178/345 (51%), Gaps = 1/345 (0%)
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A ++ DM+ + P+V ++ L A+ + L LC +M +G+ N+ + ++
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
R + A + +I P+ +++ L GLC G ++EAL+L +++++
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
D ++N L+N +C S M+ G P+ T V++ CK G T A+ L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 542
M + + + + Y+ I+GLCK S D A NL +E+ + + + T+N LI G+ N+
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
G+ D+ L +M ++ N VT++ LI+ K G EA+EL K MI +GI PD ITY
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
T+LI F K++H ++ + D M+ KG P+ +T++ ++ + A
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 141/309 (45%), Gaps = 36/309 (11%)
Query: 372 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
++A + DMI P ++ L + + L L Q+ + + ++L+I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 432 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 491
+N C+ G +I G P+ T +T+I+G C G +AL L + M++M
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 492 QPNLTIYNSFINGL-----------------------------------CKMASTDVAKN 516
+P+L N+ +NGL CK T +A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 517 LVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
L+ ++ +R + LDA ++ +I G G +D AF L EM+ G++ N +TYN LI C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 635
G ++ +L++ MI + I P+ +T++ LI F K+ E LH MI +G+ PD
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 636 TYDAIVTPF 644
TY +++ F
Sbjct: 370 TYTSLIDGF 378
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%)
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 553
NL+ +GL + + D D + R L F+ L S + + Q D L
Sbjct: 53 NLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCK 112
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
+M+ G++ N T + +IN C+ A M +I G P+ IT++TLI +
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 614 HPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
E + L D M+ G PD T + +V L+
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 245/502 (48%), Gaps = 4/502 (0%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
F+ L A + E + ++ ++G S++ + ++ + + +
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G+ + FN + LC ECRV EA+ ++ RM++ G P +++ N +++G C G +
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A+ ++ +M + TG PN V+Y ++N CK G LA E+L M + + Y+
Sbjct: 211 DAVVLIDRM-VETG--FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
+IDG + GSL+ + L +EM +G +I+ YN+++ G ++ +K+L DMI +
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
I P+ ++++L + + G L EA +L ++++ + + + N L++ CK
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
MI++G PD+ T +I+G CK + L L+ M N YN+ + G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 505 LCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
C+ +VAK L E+ R++ D ++ L+ G ++G++++A + +++ + +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 623
Y +I+ +C ++A +L + ++G++ D Y +I+ +K + L
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Query: 624 YMILKGVIPDQKTYDAIVTPFL 645
M +G PD+ TY+ ++ L
Sbjct: 568 KMTEEGHAPDELTYNILIRAHL 589
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 245/525 (46%), Gaps = 33/525 (6%)
Query: 90 HSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALV 149
HS+++ ++ R + A S M + M Y+ +F+ L+
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKI---------------MKLGYEPDTVIFNTLL 165
Query: 150 RA-CTQVGATEGA--YDVICELRTRGCLVSVHAWNNFLSHLVEVND----IDRFWRLYKG 202
C + +E D + E+ + L++++ N L +V+D IDR
Sbjct: 166 NGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR------- 218
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M G N T+ + +CK + A+ ++ +M + + V +++IIDG CK GS
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
LD A + +M + + ++YN++I GFC G ++L DM+K P+V T
Sbjct: 279 LDNAFNLFNEMEI---KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
++ LID + + G L E+ +L EM++RG+ PN + YNS++ + +EEA +++ MI
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
K PD ++ IL G C+ + + L+L ++ +I + + N L+ C+S
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M++R + PD+ + ++DG C G EKAL ++ + K + ++ IY I
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 503 NGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+G+C + D A +L L + + LDA +N +IS + +A L +M G +
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
+ +TYN LI + A EL++ M G D T +I
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 195/414 (47%), Gaps = 41/414 (9%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM-TGNSVWPNSVSY 288
+A+ + M++ P V+ FN + KT +L L + K+M +S++ S+
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI-- 128
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFE------------------------------- 317
+IN FC+ L A +G ++K G+E
Sbjct: 129 --MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 318 ----PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 373
P++ T TL++G G + +++ L D MVE G PN V Y +L + + G
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 374 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 433
A ++L M +++I D Y+I+ +GLC++G L A L N++ D + N L+
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 434 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 493
C + MI R + P+V T + +ID K G +A +L M++ P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLT 552
N YNS I+G CK + A +VD + + D TFN LI+GY + +ID+ L
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
EM G+ AN VTYNTL+ C++G E AK+L + M+ + +RPD ++Y L+
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 208/422 (49%), Gaps = 5/422 (1%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
L++ +++ +Q + ++ + G T A +++ ++ R + ++ + L
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ +D + L+ M G ++ T+N I C R + ++ M+K PNVV
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
+F+++ID K G L A +++K+ M + PN+++YNS+I+GFCK+ L A +++
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKE---MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
M+ G +P + T+ LI+GY + +++ L L EM RG+ N V YN+++ +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
G +E A K+ +M+ + + PD SY IL +GLC NG L +AL++ +I K + D
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
I+++ +C + S+ +G+ D +I C+ + KA L+ M +
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 547
P+ YN I A L++E++ D +T +I+ S SG++D+
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS-SGELDK 630
Query: 548 AF 549
+F
Sbjct: 631 SF 632
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 172/345 (49%), Gaps = 1/345 (0%)
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A ++ DM+++ P+V + L A+ E L LC +M +G+ +I + ++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
R + A + ++ PD + L GLC ++EAL+L +++++
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
+LN L+N +C + M+ G P+ T V++ CK G T A+ L
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNS 542
M + + + + Y+ I+GLCK S D A NL +E+ + D T+NTLI G+ N+
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
G+ D+ L +M +S N VT++ LI+ K G EA +L+K M+ +GI P+ ITY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
+LI F K++ EE I + D MI KG PD T++ ++ + A
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 1/309 (0%)
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
++++ L +M++ P ++ +N + + + E + M K I Y+ +I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 456
CR L+ A +I+K D N LLN +C M+ G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 516
P + T T+++G C G A+ L + M++ QPN Y +N +CK T +A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 517 LVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
L+ ++ +R + LDA ++ +I G G +D AF L EM+ G A+ +TYNTLI C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 635
G ++ +L++ MI + I P+ +T++ LI F K+ E L M+ +G+ P+
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 636 TYDAIVTPF 644
TY++++ F
Sbjct: 370 TYNSLIDGF 378
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 152/339 (44%), Gaps = 18/339 (5%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVG 156
TL+ N+ + + L+R++I K I+P F L+ + + G
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMI-KRKISP--------------NVVTFSVLIDSFVKEG 347
Query: 157 ATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFN 216
A ++ E+ RG + +N+ + + N ++ ++ M S G ++ TFN
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 217 LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
+ I CK R+ + + + M G N V++N ++ G C++G L++A K+ ++ M
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE---M 464
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
V P+ VSY +++G C G L A E+ G + K+ E + Y +I G +
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
+++ L + +G+ + YN ++ L R + +A + M ++ PD+ +Y IL
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
+ T A +L ++ D ++ +++N +
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%)
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 553
NL+ + +GL + + D D ++ R L FN L S + + Q + L
Sbjct: 53 NLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCK 112
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
+M+S G++ + T + +IN C+ A M ++ G PD + + TL+ +
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 614 HPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
E + L D M+ G P T + +V L
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 157/576 (27%), Positives = 260/576 (45%), Gaps = 36/576 (6%)
Query: 74 PHLALDFYNWVGM--LFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLE 131
P AL+F +W+ + HS++S +LL +L+N+ + + R L+ K
Sbjct: 103 PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKI-RLLMIKS--------- 152
Query: 132 ALMDESYQHCPAVFDAL--VRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVE 189
C +V DAL + C ++ E EL+ + + + +N L+ L
Sbjct: 153 ---------CDSVGDALYVLDLCRKMNKDERF-----ELKYK---LIIGCYNTLLNSLAR 195
Query: 190 VNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVS 249
+D ++Y M N+ T+N + CK V EA + ++++ G P+ +
Sbjct: 196 FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFT 255
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
+ +I G C+ LD A KV +M L N V+Y +I+G C + A ++
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPL---KGCRRNEVAYTHLIHGLCVARRIDEAMDLFV 312
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
M P+VRTY LI E+L L EM E G+ PNI Y ++ L
Sbjct: 313 KMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC 372
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
E+A ++L M++K + P+ +Y L G C+ G + +A+ + + L + + N
Sbjct: 373 KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN 432
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
L+ CKS M+ R + PDV T ++IDG C+ GN + A RL + M
Sbjct: 433 ELIKGYCKSNVHKAMGVL-NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA 548
P+ Y S I+ LCK + A +L D L ++ + + + LI GY +G++DEA
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
+ +M S N +T+N LI+ LC +G +EA L + M+ G++P T T LI
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 609 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
K + + M+ G PD TY + +
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 234/482 (48%), Gaps = 22/482 (4%)
Query: 161 AYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY 220
A D+ +++ C +V + + L L K M G N++T+ + I
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 221 ALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNS 280
+LC +C+ +A ++ +ML+ G PNV+++N +I+G CK G ++ A+ V++ LM
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE---LMESRK 423
Query: 281 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 340
+ PN+ +YN +I G+C K + A VL M++ P V TY +LIDG R G+ + +
Sbjct: 424 LSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 341 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
RL M +RGL P+ Y S++ L + +EEA + + K + P+ Y L +G
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 401 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 460
C+ G + EA + ++L + + ++ + N L++ +C M+ GL P V
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 520
T +I K G+ + A + M+ +P+ Y +FI C+ A++++ +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 521 LRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 579
+R+ + D T+++LI GY + GQ + AF + M+ G ++ T+ +LI L +
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE--- 719
Query: 580 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 639
MK +G P+ + ++ + V+ L + M+ V P+ K+Y+
Sbjct: 720 -------MKYGKQKGSEPELCAMSNMMEF-------DTVVELLEKMVEHSVTPNAKSYEK 765
Query: 640 IV 641
++
Sbjct: 766 LI 767
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 184/361 (50%), Gaps = 2/361 (0%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
YN+++N + G + ++V +M++ P++ TY +++GY + G++EE+ + ++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
E GL P+ Y S++ + D++ A KV ++M K ++ +Y L GLC +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
EA+ L ++ + + +L+ +C S M G+ P+++T +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
D C EKA L M++ PN+ YN+ ING CK + A ++V+ + RKL
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 528 DAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
T T+N LI GY S + +A G+ +M + + VTYN+LI+ C++G + A L
Sbjct: 426 PNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 587 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
+ +M +G+ PD TYT++I K EE L D + KGV P+ Y A++ +
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 647 A 647
A
Sbjct: 545 A 545
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 204/466 (43%), Gaps = 23/466 (4%)
Query: 161 AYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY 220
A V+ ++ R L V +N+ + + D +RL M G V + T+ I
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 221 ALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNS 280
+LCK RV EA + + + G PNVV + +IDG CK G +D A +++KM +
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM---LSKN 562
Query: 281 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 340
PNS+++N++I+G C G L A + MVK G +P+V T LI + G + +
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 341 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG- 399
+M+ G P+ Y + + R G + +A +++ M + + PD ++Y+ L +G
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 400 --LCRNGYLTEALKL-------HNQILKFDLIEDAFSLNI--------LLNYICKSXXXX 442
L + + + LK +Q LI+ + L +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSF 501
M+ + P+ + +I G C++GN A ++++ M + + P+ ++N+
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 502 INGLCKMASTDVAKNLVDELR-KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
++ CK+ + A +VD++ L + LI G G+ + + + G
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 561 SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
+ + + +I+ + K G E EL +M G + TY+ LI
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 167/415 (40%), Gaps = 57/415 (13%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
+ +++ + + E A D+ L +G +V + + + +D + + M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
S + N TFN I+ LC + ++ EA + +M+K G P V + ++I K G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
D A ++M L +G P++ +Y + I +C++G LL AE+++ M + G P + TY
Sbjct: 619 DHAYSRFQQM-LSSGTK--PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL--YRHG------------ 369
++LI GY G + + M + G P+ + S++ L ++G
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 370 ----DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ + ++L M++ + P+ SY L G+C G L A K+ + + + + I +
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 426 -FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV----------YTKAT--------- 465
N LL+ CK MI G P + Y K
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Query: 466 ----------------VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
+IDG K G E L+N M K + + Y+ I G
Sbjct: 856 NLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 145/329 (44%), Gaps = 22/329 (6%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
+LE ++ ++ F+AL+ G + A + ++ G +V + L+
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ D D + ++ M S G + +T+ I C+E R+++A ++ +M ++G P++
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN--------------- 293
+++ +I G G + A V+K+M P+ ++ S+I
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMR---DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730
Query: 294 GFCKKGGLLLAE---EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE-R 349
C ++ + E+L MV+ P+ ++Y LI G G+L + ++ D M
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G+ P+ +V+N++L + EA+KV+ DMI P S +L GL + G
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERG 850
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKS 438
+ +L+ ED + I+++ + K
Sbjct: 851 TSVFQNLLQCGYYEDELAWKIIIDGVGKQ 879
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 211/409 (51%), Gaps = 7/409 (1%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L M G+ + TF I+ L + EA+ ++ +M++ G P++V++ +++G C
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K G +DLAL ++ KM + N V +N+II+ CK + +A ++ +M G P
Sbjct: 235 KRGDIDLALNLLNKME---AARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+V TY +LI+ +G ++ RL M+E+ + PN+V +N+++ ++ G + EA K+
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
+MI + I PD +Y +L G C + L EA ++ ++ D + + + N L+N CK
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
M RGL + T T+I G + G+ + A ++ M+ ++ Y
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
+ ++GLC D A + L+K ++ L+ +NT+I G +G++ EA+ L S
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFC---S 528
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
L + + VTYNT+I+ LC +EA +L + M G P+ TY TLI
Sbjct: 529 LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/516 (24%), Positives = 248/516 (48%), Gaps = 36/516 (6%)
Query: 159 EGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLA 218
+ A D+ ++ S+ +N LS + ++N + L + M + G ++ T+++
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM----- 273
I C+ ++ A+ V+ +M+K G P++V+ + +++G C + + A+ ++ +M
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 274 ---------------------------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
+ M P+ V+Y +++NG CK+G + LA
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+L M A + +V + T+ID ++ +E ++ L EM +G+ PN+V YNS++ L
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+G +AS++LS+M++K I P+ ++ L + + G L EA KLH ++++ + D
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ N+L+N C M+++ P++ T T+I+G CK E + L+ M
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQI 545
+ N Y + I G + D A+ + ++ ++ D T++ L+ G + G++
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
D A + ++ + N YNT+I +CK G EA +L + I+PD +TY T+
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTM 541
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
I+ K +E L M G +P+ TY+ ++
Sbjct: 542 ISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 209/416 (50%), Gaps = 4/416 (0%)
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
+V +A+ + M+K FP++V FN ++ K +L + + ++M + + +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL---GISHDLY 119
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
+Y+ IN FC++ L LA VL M+K G+EP + T ++L++GY + +++ L D+M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
VE G P+ + ++++ L+ H EA ++ M+ + PD +Y + GLC+ G +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
AL L N++ + + N +++ +CK M T+G+ P+V T ++
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
I+ C G A RL + M++ PN+ +N+ I+ K A+ L +E+ +R +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 527 -LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
D T+N LI+G+ ++DEA + M S N TYNTLIN CK E+ E
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
L + M +G+ + +TYTT+I F + + + M+ V D TY ++
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 206/430 (47%), Gaps = 9/430 (2%)
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
A E +A L++ ++ Q + +V + G + A +++ ++ +V
Sbjct: 204 ASEAVA---LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+N + L + ++ L+ M + G NV T+N I LC R +A ++ ML
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
+ PNVV+FN +ID K G L A K+ ++M S+ P++++YN +INGFC
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM---IQRSIDPDTITYNLLINGFCMHN 377
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
L A+++ MV P+++TY TLI+G+ + +E+ + L EM +RGL N V Y
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
+I+ ++ GD + A V M+ + D +Y+IL GLC G L AL + + K
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 420 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
++ + F N ++ +CK+ S+ + PDV T T+I G C ++A
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 480 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGY 539
L+ M + PN YN+ I + + L+ E+R + + +L++
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNM 614
Query: 540 SNSGQIDEAF 549
+ G++D++F
Sbjct: 615 LHDGRLDKSF 624
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 157/312 (50%), Gaps = 1/312 (0%)
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+++++ L +MV+ FP+IV +N +L + + E + M I D Y+Y+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
CR L+ AL + +++K D +L+ LLN C S M+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
PD +T T+I G +A+ L + M++ QP+L Y + +NGLCK D+A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 516 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
NL++++ ++ + FNT+I ++ A L TEM++ G+ N VTYN+LIN L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C G +A L+ M+ + I P+ +T+ LI F K+ E LH+ MI + + PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 635 KTYDAIVTPFLL 646
TY+ ++ F +
Sbjct: 364 ITYNLLINGFCM 375
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 214/418 (51%), Gaps = 4/418 (0%)
Query: 225 ECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPN 284
+ ++ +AI + M+K P++V FN ++ K D+ + + +KM + +
Sbjct: 63 DMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL---EIVHG 119
Query: 285 SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD 344
+YN +IN FC++ + LA +LG M+K G+EPS+ T ++L++GY + +++ L D
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
+MVE G P+ + + ++++ L+ H EA ++ M+ + P+ +Y ++ GLC+ G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
AL L N++ + D N +++ +CK M T+G+ P+V T +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
++I C G A +L + MI+ PNL +N+ I+ K A+ L D++ KR
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 525 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ D T+N+L++G+ ++D+A + M S + VTYNTLI CK+ E+
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
EL + M +G+ D +TYTTLI + + M+ GV PD TY ++
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 238/505 (47%), Gaps = 33/505 (6%)
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
L S+ +N LS + ++ D L + M V + T+N+ I C+ ++ A+
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM-------------------- 273
++ +M+K G P++V+ + +++G C + A+ ++ +M
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 274 ------------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 321
+ M PN V+Y ++NG CK+G LA +L M A E V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
+ T+ID ++ ++++L L EM +G+ PN+V Y+S++ L +G +AS++LSDM
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 441
I+K I P+ ++ L + + G EA KL++ ++K + D F+ N L+N C
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 442 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 501
M+++ PDV T T+I G CK E L+ M + Y +
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 502 INGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
I GL D A+ + ++ + D T++ L+ G N+G++++A + M+ +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 561 SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA 620
+ Y T+I +CK G ++ +L + ++G++P+ +TY T+I+ K +E A
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 621 LHDYMILKGVIPDQKTYDAIVTPFL 645
L M G +P+ TY+ ++ L
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHL 586
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 209/425 (49%), Gaps = 33/425 (7%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L M G+ + TF I+ L + EA+ ++ RM++ G PN+V++ ++++G C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 259 KTGSLDLALKVMKKM-----------------------------NL---MTGNSVWPNSV 286
K G DLAL ++ KM NL M + PN V
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
+Y+S+I+ C G A ++L DM++ P++ T+ LID + + G E+ +L D+M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
++R + P+I YNS++ H +++A ++ M+ K PD +Y L +G C++ +
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
+ +L ++ L+ D + L+ + M++ G+PPD+ T + +
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
+DG C G EKAL +++ M K + + ++ IY + I G+CK D +L L + +
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 527 L-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
+ T+NT+ISG + + EA+ L +MK G N TYNTLI ++G + E
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 586 LMKMM 590
L++ M
Sbjct: 597 LIREM 601
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 209/431 (48%), Gaps = 8/431 (1%)
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
A E +A L++ ++ Q + +V + G T+ A +++ ++ V
Sbjct: 206 ASEAVA---LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+N + L + +D L+K M + G NV T++ I LC R +A ++ M+
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
+ PN+V+FN +ID K G ++ K + M S+ P+ +YNS++NGFC
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKF---VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
L A+++ MV P V TY TLI G+ + +E+ L EM RGL + V Y
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
+++ L+ GD + A KV M+ + PD +Y+IL +GLC NG L +AL++ + + K
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 420 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
++ D + ++ +CK+ S+ +G+ P+V T T+I G C ++A
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 480 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK-RKLLDATTFNTLISG 538
L M + PN YN+ I + + L+ E+R R + DA+T L++
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVAN 618
Query: 539 YSNSGQIDEAF 549
+ G++D++F
Sbjct: 619 MLHDGRLDKSF 629
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 213/447 (47%), Gaps = 4/447 (0%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
L++ +++ Y+ F L+ A ++ + RGC ++ + ++ L
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ D D L M + +V FN I +LCK V +A+ + M G PNVV
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
+++ +I C G A +++ M + PN V++N++I+ F K+G + AE++
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSD---MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
DM+K +P + TY +L++G+ L+++ ++ + MV + FP++V YN+++ +
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
+E+ +++ +M + + D +Y L +GL +G A K+ Q++ + D +
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
+ILL+ +C + M + D+Y T+I+G CK G + L+ +
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDE 547
+PN+ YN+ I+GLC A L+ ++++ L ++ T+NTLI + G
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLL 574
+ L EM+S + T + N+L
Sbjct: 594 SAELIREMRSCRFVGDASTIGLVANML 620
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 1/312 (0%)
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
L++++ L MV+ P+IV +N +L + + + + M I Y+Y I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L CR ++ AL L +++K +L+ LLN C M+ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
PD T T+I G +A+ L + M++ QPNL Y +NGLCK TD+A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 516 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
NL++++ K+ D FNT+I +D+A L EM++ G+ N VTY++LI+ L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C G +A +L+ MI + I P+ +T+ LI F K+ E L+D MI + + PD
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 635 KTYDAIVTPFLL 646
TY+++V F +
Sbjct: 366 FTYNSLVNGFCM 377
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 169/368 (45%), Gaps = 1/368 (0%)
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
G + S Y I+ L A + G MVK+ PS+ + L+ A+ +
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
+ L ++M + + YN ++ R + A +L M+ P + + L
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
G C +++A+ L +Q+++ D + L++ + M+ RG
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
P++ T V++G CK G+T+ AL L N M + ++ I+N+ I+ LCK D A NL
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 518 VDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
E+ + + + T+++LIS + G+ +A L ++M ++ N VT+N LI+ K
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
G EA++L MI + I PD TY +L+ F ++ + ++M+ K PD T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 637 YDAIVTPF 644
Y+ ++ F
Sbjct: 403 YNTLIKGF 410
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 239/494 (48%), Gaps = 13/494 (2%)
Query: 123 GIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNN 182
GI L+ L L+ Y + F+++V ++G + A D++ + GC V ++N+
Sbjct: 37 GILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNS 96
Query: 183 FLSHLVEVNDIDRFWRLYKGM-GSFGHV--ENVNTFNLAIYALCKECRVVEAITVIYRML 239
+ DI + + + S G + ++ +FN K + E + ML
Sbjct: 97 LIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML 156
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
K + PNVV+++ ID CK+G L LALK + M +++ PN V++ +I+G+CK G
Sbjct: 157 KCCS-PNVVTYSTWIDTFCKSGELQLALK---SFHSMKRDALSPNVVTFTCLIDGYCKAG 212
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
L +A + +M + +V TY LIDG+ + G ++ + + MVE + PN +VY
Sbjct: 213 DLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYT 272
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
+I+ ++ GD + A K L+ M+++ + D +Y ++ GLC NG L EA ++ + K
Sbjct: 273 TIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKS 332
Query: 420 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
DL+ D ++N KS +I RG PDV +T+IDG K G +A
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Query: 480 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISG 538
+ + E+ N +Y I+ LCK + L ++ + L+ D + + I+G
Sbjct: 393 IVYF-----CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAG 447
Query: 539 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 598
G + +AF L T M GL + + Y TLI L G EA+++ M+ GI PD
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 599 CITYTTLITHFNKK 612
+ LI + K+
Sbjct: 508 SAVFDLLIRAYEKE 521
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 175/410 (42%), Gaps = 43/410 (10%)
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
V EA+ + R+ K P+ + N I + L+LK + + P+ S
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLA---YLVSRGYTPHRSS 58
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
+NS+++ CK G + AE+++ M + G EP
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEP----------------------------- 89
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH--IC-PDQYSYAILTEGLCRNG 404
+++ YNS++ R+GD+ AS VL + H IC PD S+ L G +
Sbjct: 90 ------DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMK 143
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
L E +LK + + + ++ CKS SM L P+V T
Sbjct: 144 MLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFT 202
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RK 523
+IDG CK G+ E A+ LY M ++ N+ Y + I+G CK A+ + +
Sbjct: 203 CLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 524 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
R ++ + T+I G+ G D A +M + G+ + Y +I+ LC NG +EA
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
E+++ M + PD + +TT++ + K + + ++ +I +G PD
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD 372
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 141/321 (43%), Gaps = 33/321 (10%)
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ D++ LYK M NV T+ I CK+ + A + RM++D PN +
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
+ IIDG + G D A+K + KM + + +Y II+G C G L A E++
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKM---LNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV------------ 356
DM K+ P + + T+++ Y + G ++ ++ + +++ERG P++V
Sbjct: 327 EDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKN 386
Query: 357 --VYNSILYW----------------LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
++ +I+Y+ L + GD E ++ S + + + PD++ Y
Sbjct: 387 GQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIA 446
Query: 399 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
GLC+ G L +A KL ++++ L+ D + L+ + M+ G+ P
Sbjct: 447 GLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISP 506
Query: 459 DVYTKATVIDGNCKLGNTEKA 479
D +I K GN A
Sbjct: 507 DSAVFDLLIRAYEKEGNMAAA 527
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 133/287 (46%), Gaps = 12/287 (4%)
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
E+ ++++ + V+ ++ Q G ++ A + ++ +G + + A+ +S L
Sbjct: 254 EMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313
Query: 188 VEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNV 247
+ + + M V ++ F + A K R+ A+ + +++++ G P+V
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDV 373
Query: 248 VSFNMIIDGACKTGSLDLALK--VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
V+ + +IDG K G L A+ ++K N V Y +I+ CK+G + E
Sbjct: 374 VALSTMIDGIAKNGQLHEAIVYFCIEK----------ANDVMYTVLIDALCKEGDFIEVE 423
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
+ + +AG P Y + I G + G+L ++ +L MV+ GL +++ Y +++Y L
Sbjct: 424 RLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGL 483
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 412
G M EA +V +M++ I PD + +L + G + A L
Sbjct: 484 ASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 38/254 (14%)
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA------L 480
S N +++++CK SM G PDV + ++IDG+C+ G+ A L
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 481 R----------------LYNGMIKM---DE------------QPNLTIYNSFINGLCKMA 509
R L+NG KM DE PN+ Y+++I+ CK
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 510 STDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 568
+A +++ L + TF LI GY +G ++ A L EM+ + +S N VTY
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 569 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 628
LI+ CK G + A+E+ M+ + P+ + YTT+I F ++ + + M+ +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 629 GVIPDQKTYDAIVT 642
G+ D Y I++
Sbjct: 298 GMRLDITAYGVIIS 311
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 237/484 (48%), Gaps = 6/484 (1%)
Query: 161 AYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY 220
A ++ E+R + V ++N + E ++++ L M G ++ T+ + I
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 221 ALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNS 280
A CK ++ EA+ + M G ++V + +I G C G LD + ++ L G+S
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDS 279
Query: 281 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 340
P +++YN++I GFCK G L A E+ M++ G P+V TY LIDG G +E+L
Sbjct: 280 --PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 341 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
+L + M+E+ PN V YN I+ L + G + +A +++ M + PD +Y IL GL
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 401 CRNGYLTEALKLHNQILKFDLIED--AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
C G L EA KL +LK D S N L++ +CK ++ +
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
D T +++ K G+ KA+ L+ + N Y + I+G CK +VAK L+
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 519 DELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 577
++R +L + +N L+S G +D+A+ L EM+ + V++N +I+ K
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 578 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
G + A+ L+ M G+ PD TY+ LI F K + +E I+ D M+ G PD
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 638 DAIV 641
D+++
Sbjct: 638 DSVL 641
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 219/444 (49%), Gaps = 6/444 (1%)
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
G NV N+ + LC+ +A++++ M ++ P+V S+N +I G C+ L+ A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
L++ N M G+ + V++ +I+ FCK G + A L +M G E + Y +L
Sbjct: 197 LELA---NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
I G+ G L+ L DE++ERG P + YN+++ + G ++EAS++ MI++ +
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 446
P+ Y+Y L +GLC G EAL+L N +++ D +A + NI++N +CK
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 447 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE--QPNLTIYNSFING 504
M R PD T ++ G C G+ ++A +L M+K P++ YN+ I+G
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 505 LCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
LCK A ++ D L K D T N L++ +G +++A L ++ + N
Sbjct: 434 LCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRN 493
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 623
TY +I+ CK G AK L+ M + ++P Y L++ K+ ++ L +
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553
Query: 624 YMILKGVIPDQKTYDAIVTPFLLA 647
M PD +++ ++ L A
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKA 577
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/518 (22%), Positives = 221/518 (42%), Gaps = 39/518 (7%)
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
KE LEL + + L+ A + G + A + E++ G +
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+ + + + ++DR L+ + G T+N I CK ++ EA + M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
+ G PNV ++ +IDG C G AL++ +NLM PN+V+YN IIN CK G
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQL---LNLMIEKDEEPNAVTYNIIINKLCKDG 366
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF--PNIVV 357
+ A E++ M K P TY L+ G G L+E+ +L M++ + P+++
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
YN++++ L + + +A + +++K D+ + IL + G + +A++L QI
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
++ ++ + +++ CK+ M L P V+ ++ CK G+ +
Sbjct: 487 DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD 546
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLIS 537
+A RL+ M + + P++ +N I+G K
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLK------------------------------ 576
Query: 538 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 597
+G I A L M GLS + TY+ LIN K G +EA M+ G P
Sbjct: 577 ----AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Query: 598 DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 635
D +++ + + +++ L ++ K ++ D++
Sbjct: 633 DAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKE 670
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 204/476 (42%), Gaps = 47/476 (9%)
Query: 212 VNTFN---LAIYALCKEC--RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
VN F+ + +LC++ ++ A++V + + G+ N++ ++ + +LA
Sbjct: 33 VNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAK-LVRSRNHELA 91
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
+KM + N VS + ++ + + A VL M+K GF +V + L
Sbjct: 92 FSFYRKM---LETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYN--------------------------- 359
+ G R +++ L EM L P++ YN
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 360 --SILYW------LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
S++ W + G M+EA L +M + D Y L G C G L
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKA 268
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 471
L +++L+ A + N L+ CK MI RG+ P+VYT +IDG C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 472 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DAT 530
+G T++AL+L N MI+ DE+PN YN IN LCK A +V+ ++KR+ D
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 531 TFNTLISGYSNSGQIDEAFGLTTEM--KSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
T+N L+ G G +DEA L M S + ++YN LI+ LCK +A ++
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+++ + D +T L+ K + + L + ++ + TY A++ F
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 222/420 (52%), Gaps = 4/420 (0%)
Query: 224 KECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP 283
++ ++ +AI + M+K FP++V FN ++ K D+ + + KKM ++ +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL---GIRN 118
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
+ ++N +IN FC + LA +LG M+K G+EP T +L++G+ R + +++ L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
D+MVE G P+IV YN+I+ L + + +A ++ K I P+ +Y L GLC +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
++A +L + ++K + + + + LL+ K+ M+ + PD+ T
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
+++I+G C ++A ++++ M+ ++ YN+ ING CK + L E+ +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 524 RKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 582
R L+ T T+NTLI G+ +G +D+A ++M G+S + TYN L+ LC NG E+
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
A + + M + + D +TYTT+I K EE +L + LKG+ PD TY +++
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 220/426 (51%), Gaps = 5/426 (1%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
S+ +N LS +V++ D L K M G ++ TFN+ I C +V A++++
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
+MLK G P+ V+ +++G C+ + A+ ++ KM + P+ V+YN+II+
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI---GYKPDIVAYNAIIDSL 200
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
CK + A + ++ + G P+V TY L++G ++ RL +M+++ + PN+
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
+ Y+++L ++G + EA ++ +M+ I PD +Y+ L GLC + + EA ++ +
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
++ + D S N L+N CK+ M RGL + T T+I G + G+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNT 534
+KA ++ M P++ YN + GLC + A + ++++KR++ LD T+ T
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 594
+I G +G+++EA+ L + GL + VTY T+++ LC G E + L M +G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 595 I-RPDC 599
+ + DC
Sbjct: 501 LMKNDC 506
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 176/360 (48%), Gaps = 3/360 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
L +L ++ Y+ +LV + A ++ ++ G + A+N +
Sbjct: 140 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L + ++ + +K + G NV T+ + LC R +A ++ M+K PN
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
V++++ ++D K G + A ++ ++M M S+ P+ V+Y+S+ING C + A +
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRM---SIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ MV G V +Y TLI+G+ + +E+ ++L EM +RGL N V YN+++ +
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ GD+++A + S M I PD ++Y IL GLC NG L +AL + + K ++ D
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ ++ +CK+ S+ +GL PD+ T T++ G C G + LY M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 151/313 (48%), Gaps = 1/313 (0%)
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
L +++ L +MV+ FP+IV +N +L + + + + M I D Y++ I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ C ++ AL + ++LK D ++ L+N C+ M+ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVA 514
PD+ +ID CK A + + + +PN+ Y + +NGLC + +D A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 515 KNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
+ L D ++K+ + T++ L+ + +G++ EA L EM + + + VTY++LIN L
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C + +EA ++ +M+ +G D ++Y TLI F K E+ + L M +G++ +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 635 KTYDAIVTPFLLA 647
TY+ ++ F A
Sbjct: 366 VTYNTLIQGFFQA 378
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 130/254 (51%), Gaps = 3/254 (1%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
+V ++ L V+ + L++ M ++ T++ I LC R+ EA +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
M+ G +VVS+N +I+G CK ++ +K+ ++M + + N+V+YN++I GF
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM---SQRGLVSNTVTYNTLIQGF 375
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
+ G + A+E M G P + TY L+ G G LE++L + ++M +R + +I
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
V Y +++ + + G +EEA + + K + PD +Y + GLC G L E L+ +
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 416 ILKFDLIEDAFSLN 429
+ + L+++ +L+
Sbjct: 496 MKQEGLMKNDCTLS 509
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L++ R+ L +A+ L + ++K N LL+ I K M G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
+ D+YT VI+ C AL + M+K+ +P+ S +NG C+ A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 516 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
+LVD++ + D +N +I + ++++AF E++ G+ N VTY L+N L
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C + +A L+ MI + I P+ ITY+ L+ F K E L + M+ + PD
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 635 KTYDAIVTPFLL 646
TY +++ L
Sbjct: 296 VTYSSLINGLCL 307
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 123/280 (43%), Gaps = 29/280 (10%)
Query: 98 LLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQH-----CPAVFDALVRAC 152
L+ L NS +++A L+ ++I K+ + AL+D ++ +F+ +VR
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 153 T------------------QVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDID 194
++ +D++ ++GCL V ++N ++ + ++
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMV---SKGCLADVVSYNTLINGFCKAKRVE 347
Query: 195 RFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
+L++ M G V N T+N I + V +A +M G P++ ++N+++
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
G C G L+ AL + + M + + V+Y ++I G CK G + A + +
Sbjct: 408 GGLCDNGELEKALVIFEDMQ---KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN 354
G +P + TY T++ G G L E L +M + GL N
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 237/506 (46%), Gaps = 21/506 (4%)
Query: 88 FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEG--------IAPLELLEALMDESYQ 139
F ++ + L + L FTEA SL+ +++++G I+ +E+ M
Sbjct: 114 FRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPM----- 168
Query: 140 HCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRL 199
C + DAL+ T +G A R V + N L ++++N W
Sbjct: 169 -CGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGF 227
Query: 200 YKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACK 259
Y + G NV FN+ + CKE + +A V + K P VVSFN +I+G CK
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 260 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 319
G+LD ++ +M + P+ +Y+++IN CK+ + A + +M K G P+
Sbjct: 288 VGNLDEGFRLKHQME---KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
+ TLI G++R G ++ +M+ +GL P+IV+YN+++ ++GD+ A ++
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
MI + + PD+ +Y L +G CR G + AL++ ++ + + D + L+ +CK
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
M+ G+ PD T ++D CK G+ + +L M P++ YN
Sbjct: 465 RVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN 524
Query: 500 SFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
+NGLCK+ A L+D + ++ D T+NTL+ G+ + + + +
Sbjct: 525 VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY---IQKPEI 581
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAK 584
G+ A+ +Y +++N L + D +
Sbjct: 582 GIVADLASYKSIVNELDRASKDHRNR 607
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 1/330 (0%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
K F+ +R L+D + E+++ G N+ V+N ++ + G++
Sbjct: 198 KHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNIS 257
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
+A KV ++ + + P S+ L G C+ G L E +L +Q+ K D F+ + L+
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
N +CK M RGL P+ T+I G+ + G + Y M+ Q
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 551
P++ +YN+ +NG CK A+N+VD + +R L D T+ TLI G+ G ++ A +
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 552 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 611
EM G+ +RV ++ L+ +CK G +A+ ++ M+ GI+PD +TYT ++ F K
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 612 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
K + L M G +P TY+ ++
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G P +VY +++ CK GN A ++++ + K QP + +N+ ING CK+ + D
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 515 KNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
L ++ K R D T++ LI+ ++D A GL EM GL N V + TLI+
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
+NG + KE + M+ +G++PD + Y TL+ F K + D MI +G+ PD
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 634 QKTYDAIVTPF 644
+ TY ++ F
Sbjct: 415 KITYTTLIDGF 425
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 226/453 (49%), Gaps = 5/453 (1%)
Query: 159 EGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLA 218
+ A+ + CE+ + S+ + L+ + ++N D LY M + G ++ +F +
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTG 278
I+ C+ R+ A+ ++ +M+K G P++V+ +++G C+ A+ ++ M+ G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD---G 177
Query: 279 NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
PN V YN++ING CK L A EV M K G TY TLI G + G +
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 339 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
+ RL +MV+R + PN++ + +++ + G++ EA + +MI + + P+ ++Y L
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 399 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
G C +G L +A + + ++ D + N L+ CKS M +GL
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
D +T T+I G C+ G A +++N M+ P++ YN ++ LC + A +V
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 519 DELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 577
++L+K ++ +D T+N +I G + ++ EA+ L + G+ + + Y T+I+ LC+
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 578 GCDEEAKELMKMMIMQGIRPDCITY-TTLITHF 609
G EA +L + M G P Y TL H+
Sbjct: 478 GLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 207/415 (49%), Gaps = 6/415 (1%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM-NLMTGNSVWPNSVSY 288
+A ++ ML+ P++V F ++ K D+ + + KM NL + ++ S+
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY----SF 117
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
+I+ FC+ L LA +LG M+K GF PS+ T +L++G+ + +E++ L D M
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
G PN+V+YN+++ L ++ D+ A +V M K I D +Y L GL +G T+
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A +L ++K + + L++ K MI R + P+V+T ++I+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL- 527
G C G A +++ M+ P++ YN+ I G CK + L E+ + L+
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
DA T+NTLI GY +G+++ A + M G+S + VTYN L++ LC NG E+A ++
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ + + D ITY +I + +E L + KGV PD Y +++
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 147/313 (46%), Gaps = 1/313 (0%)
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+++ L EM++ P+IV + +L + + + + M + I D YS+ I
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L CR L+ AL L +++K +L LLN C+ SM G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVA 514
P+V TVI+G CK + AL ++ M K + + YN+ I+GL TD A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 515 KNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
+ L D ++++ + F LI + G + EA L EM + N TYN+LIN
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C +GC +AK + +M+ +G PD +TY TLIT F K E+ + L M +G++ D
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 635 KTYDAIVTPFLLA 647
TY+ ++ + A
Sbjct: 360 FTYNTLIHGYCQA 372
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 53/316 (16%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVG 156
TL+ L NS +T+A L+R+++ ++ +D + A+ D V+
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRK-----------IDPNVIFFTALIDTFVK------ 266
Query: 157 ATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFN 216
EG +L+E + LYK M V NV T+N
Sbjct: 267 --EG-------------------------NLLEARN------LYKEMIRRSVVPNVFTYN 293
Query: 217 LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
I C + +A + M+ G FP+VV++N +I G CK+ ++ +K+ + M
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE---M 350
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
T + ++ +YN++I+G+C+ G L +A++V MV G P + TY L+D G +
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
E++L + +++ + + +I+ YN I+ L R ++EA + + K + PD +Y +
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITM 470
Query: 397 TEGLCRNGYLTEALKL 412
GLCR G EA KL
Sbjct: 471 ISGLCRKGLQREADKL 486
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 158/590 (26%), Positives = 279/590 (47%), Gaps = 10/590 (1%)
Query: 47 RWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVG--MLFPHSLHSSCTLLQVLVN 104
R+ AL LS + ++N ++ +P L+ +N F + C ++ +L
Sbjct: 57 RYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSR 116
Query: 105 SRWFTEALSLMRNLIA--KEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAY 162
+R + + S + L+A G L + E + P VFD +++ + G + A
Sbjct: 117 ARNYQQTKSYLCELVALNHSGFVVWGELVRVFKE-FSFSPTVFDMILKVYAEKGLVKNAL 175
Query: 163 DVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYAL 222
V + G + S+ + N+ LS+LV + +Y M SF +V T ++ + A
Sbjct: 176 HVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAY 235
Query: 223 CKECRVVEAITVIYRMLKD-GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSV 281
C+ V +A+ G NVV++N +I+G G ++ +V++ LM+ V
Sbjct: 236 CRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLR---LMSERGV 292
Query: 282 WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLR 341
N V+Y S+I G+CKKG + AE V + + Y L+DGY R G + +++R
Sbjct: 293 SRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVR 352
Query: 342 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 401
+ D M+E G+ N + NS++ + G + EA ++ S M D + PD ++Y L +G C
Sbjct: 353 VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYC 412
Query: 402 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 461
R GY+ EALKL +Q+ + +++ + NILL + M+ RG+ D
Sbjct: 413 RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEI 472
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
+ +T+++ KLG+ +A++L+ ++ + N I+GLCKM + AK ++D +
Sbjct: 473 SCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
Query: 522 RKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
+ A T+ L GY G + EAF + M+ G+ YNTLI+ K
Sbjct: 533 NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHL 592
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 630
+ +L+ + +G+ P TY LIT + ++ A MI KG+
Sbjct: 593 NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 215/433 (49%), Gaps = 11/433 (2%)
Query: 215 FNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
F++ + ++ V A+ V M G P+++S N ++ + G +AL V +M
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM- 216
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKG----GLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
V P+ + + ++N +C+ G ++ A+E + G E +V TY +LI+GY
Sbjct: 217 --ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSL---GLELNVVTYNSLINGY 271
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
A G +E R+ M ERG+ N+V Y S++ + G MEEA V + +K + DQ
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ 331
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
+ Y +L +G CR G + +A+++H+ +++ + + N L+N CKS
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR 391
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M L PD +T T++DG C+ G ++AL+L + M + + P + YN + G ++ +
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 511 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
+L + KR + D + +TL+ G +EA L + + GL + +T N
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
+I+ LCK EAKE++ + + +P TY L + K + +E A+ +YM KG
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 630 VIPDQKTYDAIVT 642
+ P + Y+ +++
Sbjct: 572 IFPTIEMYNTLIS 584
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 220/464 (47%), Gaps = 18/464 (3%)
Query: 178 HAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYR 237
H +N + +D +L M V V T+N+ + + + +++
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 461
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
MLK G + +S + +++ K G + A+K+ + + + ++++ N +I+G CK
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV---LARGLLTDTITLNVMISGLCK 518
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
+ A+E+L ++ +P+V+TY L GY + G+L+E+ + + M +G+FP I +
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM 578
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
YN+++ +++ + + + ++ ++ + + P +Y L G C G + +A
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATC---- 634
Query: 418 KFDLIEDAFSLNI-LLNYICKSXXXXXXXXXXGSMITRG-----LPPDVYTKATVIDGNC 471
F++IE +LN+ + + I S ++ + L P + ++ +
Sbjct: 635 -FEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASA 693
Query: 472 K--LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL--RKRKLL 527
L + A + N K PN +YN I GLCK + A+ L +L R +
Sbjct: 694 TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP 753
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
D T+ LI G + +G I++AF L EM G+ N VTYN LI LCK G + A+ L+
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 631
+ +GI P+ ITY TLI K + E + L + MI KG++
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 143/627 (22%), Positives = 256/627 (40%), Gaps = 134/627 (21%)
Query: 137 SYQHCPAVF--DALVRACTQVGATEGAYDVICELRTR-GCLVSVHAWNNFLSHLVEVNDI 193
S++ P VF +V A + G + A E + G ++V +N+ ++ + D+
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 194 DRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMI 253
+ R+ + M G NV T+ I CK+ + EA V + + + + ++
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 254 IDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 313
+DG C+TG + A++V M + V N+ NS+ING+CK G L+ AE++ M
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEI---GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 314 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN-------------- 359
+P TY TL+DGY R G ++E+L+LCD+M ++ + P ++ YN
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 360 ---------------------SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
++L L++ GD EA K+ +++ + + D + ++
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMIS 514
Query: 399 GLCRNGYLTEALKLHNQI-------------------LKFDLIEDAFSL----------- 428
GLC+ + EA ++ + + K +++AF++
Sbjct: 515 GLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP 574
Query: 429 -----NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
N L++ K + RGL P V T +I G C +G +KA
Sbjct: 575 TIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATC 634
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSG 543
MI+ N+ I + N L ++ D A L+ +K++D F+ L+ GY +
Sbjct: 635 FEMIEKGITLNVNICSKIANSLFRLDKIDEACLLL-----QKIVD---FDLLLPGYQSLK 686
Query: 544 QIDEAFGLTTEMKSLGLS-------------ANRVTYNTLINLLCKNGCDEEAKELMK-- 588
+ EA TT +K+ ++ N + YN I LCK G E+A++L
Sbjct: 687 EFLEA-SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745
Query: 589 ----------------------------------MMIMQGIRPDCITYTTLITHFNKKHH 614
M ++GI P+ +TY LI K +
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 615 PEEVIALHDYMILKGVIPDQKTYDAIV 641
+ L + KG+ P+ TY+ ++
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLI 832
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 213/494 (43%), Gaps = 68/494 (13%)
Query: 93 HSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRAC 152
H+ TL+ + + EAL L + KE + P + ++ L++
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKE-VVPTVM--------------TYNILLKGY 446
Query: 153 TQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENV 212
+++GA + + RG + + L L ++ D + +L++ + + G + +
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506
Query: 213 NTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKK 272
T N+ I LCK +V EA ++ + P V ++ + G K G+L A V +
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE- 565
Query: 273 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 332
M ++P YN++I+G K L +++ ++ G P+V TY LI G+
Sbjct: 566 --YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID--------- 383
G ++++ C EM+E+G+ N+ + + I L+R ++EA +L ++D
Sbjct: 624 IGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ 683
Query: 384 -----------------------------KHICPDQYSYAILTEGLCRNGYLTEALKLHN 414
K + P+ Y + GLC+ G L +A KL +
Sbjct: 684 SLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFS 743
Query: 415 QILKFD-LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
+L D I D ++ IL++ + M +G+ P++ T +I G CKL
Sbjct: 744 DLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKL 803
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKLLDATTF 532
GN ++A RL + + + PN YN+ I+GL K + N+ + +R K K+++
Sbjct: 804 GNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK------SGNVAEAMRLKEKMIE---- 853
Query: 533 NTLISGYSNSGQID 546
L+ G G +D
Sbjct: 854 KGLVRGSDKQGDVD 867
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 159/343 (46%), Gaps = 41/343 (11%)
Query: 307 VLGDMVKA----GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
V G++V+ F P+V + ++ YA G ++ +L + D M G P+++ NS+L
Sbjct: 140 VWGELVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLL 197
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
L R G+ A V MI + PD ++ +I+ CR+G + +A+
Sbjct: 198 SNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAK-------- 249
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
E SL GL +V T ++I+G +G+ E R+
Sbjct: 250 ETESSL--------------------------GLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSN 541
M + N+ Y S I G CK + A+++ + L+++KL+ D + L+ GY
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
+GQI +A + M +G+ N N+LIN CK+G EA+++ M ++PD T
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 602 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
Y TL+ + + + +E + L D M K V+P TY+ ++ +
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 158/576 (27%), Positives = 268/576 (46%), Gaps = 40/576 (6%)
Query: 72 NSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVN-SRWFTEALSL---MRNLIAKEGIAPL 127
+SP L DF S LL VL+N S+ +EA L +RN EGI P
Sbjct: 102 SSPSLKHDF--------------SYLLLSVLLNESKMISEAADLFFALRN----EGIYP- 142
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
S + D LV+ Q T + I E R S + +
Sbjct: 143 ---------SSDSLTLLLDHLVKT-KQFRVTINVFLNILESDFRP---SKFMYGKAIQAA 189
Query: 188 VEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNV 247
V+++D+ + L+ M +V +N+ I LCK R+ +A + ML P++
Sbjct: 190 VKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSL 249
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
+++N +IDG CK G+ + + KV ++M + + P+ +++N+++ G K G + AE V
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERMK---ADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
L +M GF P T++ L DGY+ E +L + + V+ G+ N + +L L +
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
G +E+A ++L + K + P++ Y + +G CR G L A + K + D +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 428 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
N L+ C+ M +G+ P V T +I G + +K + M
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQID 546
PN+ Y + IN LCK + A+ + ++ R + +N LI G + G+I+
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 547 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
+AF + EM G+ N VTYNTLI+ L G EA++L+ + +G++PD TY +LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 607 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ + + + IAL++ M G+ P KTY +++
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 236/505 (46%), Gaps = 14/505 (2%)
Query: 142 PAVF--DALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRL 199
P+VF + L+ + A + E+ R L S+ +N + + + ++ +++
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 200 YKGMGSFGHVE-NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
+ M + H+E ++ TFN + L K V +A V+ M G P+ +F+++ DG
Sbjct: 272 RERMKA-DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS 330
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
+ AL V + + V N+ + + ++N CK+G + AEE+LG + G P
Sbjct: 331 SNEKAEAALGVYETA---VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+ Y T+IDGY R G L + + M ++G+ P+ + YN ++ G+ME A K +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
+ M K + P +Y IL G R + + ++ + + S L+N +CK
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
M RG+ P V +IDG C G E A R M+K + NL Y
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
N+ I+GL A++L+ E+ ++ L D T+N+LISGY +G + L EMK
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPDCITYTTLITHFNKKHHPE 616
G+ TY+ LI+L C +E EL + + + ++PD + Y ++ + E
Sbjct: 628 SGIKPTLKTYHLLISL-----CTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDME 682
Query: 617 EVIALHDYMILKGVIPDQKTYDAIV 641
+ L MI K + D+ TY++++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLI 707
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 230/484 (47%), Gaps = 19/484 (3%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
F+ L++ + G E A +V+ E++ G + ++ + +Y+
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G N T ++ + ALCKE ++ +A ++ R + G PN V +N +IDG C+ G L
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
+ K+ M + P+ ++YN +I FC+ G + AE+ + M G PSV TY
Sbjct: 406 ---VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
LI GY R ++ + EM + G PN+V Y +++ L + + EA V DM D
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ + P Y +L +G C G + +A + ++LK + + + N L++ + +
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
+ +GL PDV+T ++I G GN ++ + LY M + +P L Y+ I+
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 504 GLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM--KSLGLS 561
LC ++ + L E+ + D +N ++ Y+ G +++AF L +M KS+GL
Sbjct: 643 -LCTKEGIELTERLFGEMSLKP--DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL- 698
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
++ TYN+LI K G E + L+ M + + P+ TY ++ K H E +
Sbjct: 699 -DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV-----KGHCE----V 748
Query: 622 HDYM 625
DYM
Sbjct: 749 KDYM 752
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 204/467 (43%), Gaps = 8/467 (1%)
Query: 125 APLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFL 184
A L + E +D + L+ A + G E A +++ +G + + +N +
Sbjct: 337 AALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 185 SHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF 244
D+ + M G + +N I C+ + A + +M G
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
P+V ++N++I G + D ++K+M N PN VSY ++IN CK LL A
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEME---DNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
+ V DM G P VR Y LIDG G +E++ R EM+++G+ N+V YN+++
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
L G + EA +L ++ K + PD ++Y L G G + + L+ + +K I+
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE-MKRSGIKP 632
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
LL +C G M L PD+ V+ G+ EKA L
Sbjct: 633 TLKTYHLLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQK 689
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSG 543
MI+ + T YNS I G K+ ++L+DE+ R++ +A T+N ++ G+
Sbjct: 690 QMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVK 749
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
A+ EM+ G + N L++ L + +EA+ ++ M
Sbjct: 750 DYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 189/432 (43%), Gaps = 69/432 (15%)
Query: 130 LEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVE 189
+EA+ + + ++ L+R ++G E A + +++ +G SV +N +
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Query: 190 VNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVS 249
+ D+ + + K M G + NV ++ I LCK +++EA V M G P V
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
+NM+IDG C G ++ A + K+M L G + N V+YN++I+G G L AE++L
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEM-LKKG--IELNLVTYNTLIDGLSMTGKLSEAEDLLL 588
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG------------------- 350
++ + G +P V TY +LI GY G+++ + L +EM G
Sbjct: 589 EISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG 648
Query: 351 ------------LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
L P+++VYN +L+ HGDME+A + MI+K I D+ +Y L
Sbjct: 649 IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 399 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
G + G L E L ++ M R + P
Sbjct: 709 GQLKVGKLCEVRSLIDE-----------------------------------MNAREMEP 733
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
+ T ++ G+C++ + A Y M + ++ I N ++GL + + A+ ++
Sbjct: 734 EADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVI 793
Query: 519 DELRKRKLLDAT 530
E+ R L D T
Sbjct: 794 SEMNGRMLGDVT 805
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 234/479 (48%), Gaps = 5/479 (1%)
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
+R+R L S+ ++ F S + + K + G N+ T N+ I C+ C+
Sbjct: 80 IRSRP-LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCK 138
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
A +V+ +++K G P+ +FN +I G G + A+ ++ +M N P+ V+
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM---VENGCQPDVVT 195
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
YNSI+NG C+ G LA ++L M + + V TY+T+ID R G ++ ++ L EM
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+G+ ++V YNS++ L + G + + +L DM+ + I P+ ++ +L + + G L
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
EA +L+ +++ + + + N L++ C M+ PD+ T ++I
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
G C + + ++++ + K N Y+ + G C+ +A+ L E+ +L
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 528 -DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
D T+ L+ G ++G++++A + +++ + V Y T+I +CK G E+A L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 587 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
+ +G++P+ +TYT +I+ KK E L M G P+ TY+ ++ L
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 193/378 (51%), Gaps = 4/378 (1%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
+AI + M++ P++V F+ +T +L L K++ L N + N + N
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL---NGIAHNIYTLN 127
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
+IN FC+ A VLG ++K G+EP T+ TLI G G + E++ L D MVE
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G P++V YNSI+ + R GD A +L M ++++ D ++Y+ + + LCR+G + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
+ L ++ + + N L+ +CK+ M++R + P+V T ++D
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-D 528
K G ++A LY MI PN+ YN+ ++G C A N++D + + K D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
TF +LI GY ++D+ + + GL AN VTY+ L+ C++G + A+EL +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 589 MMIMQGIRPDCITYTTLI 606
M+ G+ PD +TY L+
Sbjct: 428 EMVSHGVLPDVMTYGILL 445
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 204/426 (47%), Gaps = 33/426 (7%)
Query: 206 FGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDL 265
G+ + TFN I L E +V EA+ ++ RM+++G P+VV++N I++G C++G L
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 266 ALKVMKKM--------------------------------NLMTGNSVWPNSVSYNSIIN 293
AL +++KM M + + V+YNS++
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
G CK G +L DMV P+V T+ L+D + + G L+E+ L EM+ RG+ P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
NI+ YN+++ + EA+ +L M+ PD ++ L +G C + + +K+
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
I K L+ +A + +IL+ C+S M++ G+ PDV T ++DG C
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTF 532
G EKAL ++ + K + +Y + I G+CK + A NL L + + + T+
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
+ISG G + EA L +M+ G + N TYNTLI ++G + +L++ M
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Query: 593 QGIRPD 598
G D
Sbjct: 572 CGFSAD 577
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 211/447 (47%), Gaps = 4/447 (0%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
+L +M Y+ F+ L++ G A ++ + GC V +N+ ++ +
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
D L + M +V T++ I +LC++ + AI++ M G +VV
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
++N ++ G CK G + ++K M + PN +++N +++ F K+G L A E+
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKD---MVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
+M+ G P++ TY TL+DGY L E+ + D MV P+IV + S++
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
+++ KV ++ + + + +Y+IL +G C++G + A +L +++ ++ D +
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
ILL+ +C + + + + T+I+G CK G E A L+ +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDE 547
+PN+ Y I+GLCK S A L+ ++ + + T+NTLI + G +
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLL 574
+ L EMKS G SA+ + +I++L
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 149/285 (52%), Gaps = 3/285 (1%)
Query: 125 APLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFL 184
A + L + + + + +++LVR + G ++ ++ +R + +V +N L
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 185 SHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF 244
V+ + LYK M + G N+ T+N + C + R+ EA ++ M+++
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
P++V+F +I G C +D +KV + ++ + N+V+Y+ ++ GFC+ G + LA
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRN---ISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
EE+ +MV G P V TY L+DG G LE++L + +++ + + IV+Y +I+
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
+ + G +E+A + + K + P+ +Y ++ GLC+ G L+EA
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 179/396 (45%), Gaps = 38/396 (9%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
L+LL + + + + + ++ + + G + A + E+ T+G SV +N+ +
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L + + L K M S V NV TFN+ + KE ++ EA + M+ G PN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
++++N ++DG C L A + ++LM N P+ V++ S+I G+C + +
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNM---LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
V ++ K G + TY+ L+ G+ + G ++ + L EMV G+ P+++ Y +L L
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+G +E+A ++ D+ + Y + EG+C+ G +EDA+
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK----------------VEDAW 493
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
N C S+ +G+ P+V T +I G CK G+ +A L M
Sbjct: 494 ------NLFC-------------SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
+ PN YN+ I + + L++E++
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 138/276 (50%), Gaps = 1/276 (0%)
Query: 372 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
++A + +MI P ++ + R L Q+ + + ++LNI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 432 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 491
+N C+ G ++ G PD T T+I G G +A+ L + M++
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 492 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 550
QP++ YNS +NG+C+ T +A +L+ ++ +R + D T++T+I G ID A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 551 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 610
L EM++ G+ ++ VTYN+L+ LCK G + L+K M+ + I P+ IT+ L+ F
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 611 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
K+ +E L+ MI +G+ P+ TY+ ++ + +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%)
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 553
N+ +G+ + D + +R R L F+ S + + Q +
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
+++ G++ N T N +IN C+ A ++ ++ G PD T+ TLI +
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 614 HPEEVIALHDYMILKGVIPDQKTYDAIV 641
E + L D M+ G PD TY++IV
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIV 200
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 237/505 (46%), Gaps = 5/505 (0%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
+ +V A + G TE A + ++ G ++ H + L ++ +++ M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 205 -SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
N ++++ I+ LC+ R+ EA + +M + G P+ ++ ++I C G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
D A + +M PN +Y +I+G C+ G + A V MVK PSV TY
Sbjct: 318 DKAFNLFDEM---IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
LI+GY + G + + L M +R PN+ +N ++ L R G +A +L M+D
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ PD SY +L +GLCR G++ A KL + + FD+ D + ++N CK
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
G M+ +G+ D T T+IDG CK+G T AL + ++KM N ++
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 504 GLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
L K ++ ++ K L+ + T+ TL+ G SG I +F + MK G
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
N Y +IN LC+ G EEA++L+ M G+ P+ +TYT ++ + + +
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 623 DYMILKGVIPDQKTYDAIVTPFLLA 647
M+ +G + + Y +++ F+L+
Sbjct: 675 RAMVERGYELNDRIYSSLLQGFVLS 699
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 217/475 (45%), Gaps = 41/475 (8%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
L + + ++ Q + L++A G + A+++ E+ RGC +VH
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH---------- 337
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
T+ + I LC++ ++ EA V +M+KD FP+V+
Sbjct: 338 -------------------------TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVI 372
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
++N +I+G CK G + A ++ + +M + PN ++N ++ G C+ G A +L
Sbjct: 373 TYNALINGYCKDGRVVPAFEL---LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
M+ G P + +Y LIDG R G + + +L M + P+ + + +I+ +
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
G + AS L M+ K I D+ + L +G+C+ G +AL + ++K ++ SL
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL 549
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
N++L+ + K G + GL P V T T++DG + G+ + R+ M
Sbjct: 550 NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 547
PN+ Y INGLC+ + A+ L+ ++ + + T+ ++ GY N+G++D
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 548 AFGLTTEMKSLGLSANRVTYNTLIN--LLCKNGCDEEAKELMKMMIMQGIRPDCI 600
A M G N Y++L+ +L + G D + + + ++ P+CI
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECI 724
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 199/478 (41%), Gaps = 69/478 (14%)
Query: 237 RMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKK-----------------------M 273
RM DG ++ + I++ CK G + A M K +
Sbjct: 185 RMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGL 244
Query: 274 NLMTGNSVW----------PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
NL V+ PNSVSY+ +I+G C+ G L A + M + G +PS RTY
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
LI G ++++ L DEM+ RG PN+ Y ++ L R G +EEA+ V M+
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
I P +Y L G C++G + A +L + K + + N L+ +C+
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
M+ GL PD+ + +IDG C+ G+ A +L + M D +P+ + + IN
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 504 GLCKMASTDVAKNLVD-ELRKRKLLDATTFNTLISGYSNSG------------------- 543
CK DVA + LRK LD T TLI G G
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 544 ----------------QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
++ E + ++ LGL + VTY TL++ L ++G + ++
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
++M + G P+ YT +I + EE L M GV P+ TY +V ++
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 165/360 (45%), Gaps = 2/360 (0%)
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
N Y+S++ K LA M GF + Y T+++ + G E +
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCR 402
++++ G + + S+L R ++ +A KV M + C P+ SY+IL GLC
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 403 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 462
G L EA L +Q+ + + +L+ +C MI RG P+V+T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
+IDG C+ G E+A + M+K P++ YN+ ING CK A L+ +
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 523 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
KR + TFN L+ G G+ +A L M GLS + V+YN LI+ LC+ G
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 582 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
A +L+ M I PDC+T+T +I F K+ + A M+ KG+ D+ T ++
Sbjct: 459 TAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 182/453 (40%), Gaps = 72/453 (15%)
Query: 261 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF---- 316
LDL M + + Y +I+N CK G AE + ++K GF
Sbjct: 171 AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDS 230
Query: 317 --------------------------------EPSVRTYATLIDGYARWGSLEESLRLCD 344
P+ +Y+ LI G G LEE+ L D
Sbjct: 231 HIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKD 290
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
+M E+G P+ Y ++ L G +++A + +MI + P+ ++Y +L +GLCR+G
Sbjct: 291 QMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
+ EA + +++K + + N L+N CK M R P+V T
Sbjct: 351 KIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFN 410
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
+++G C++G KA+ L M+ P++ YN I+GLC+ + A L+ +
Sbjct: 411 ELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF 470
Query: 525 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ D TF +I+ + G+ D A M G+S + VT TLI+ +CK G +A
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Query: 584 ----KELMKMMIMQ-------------------------------GIRPDCITYTTLITH 608
+ L+KM I+ G+ P +TYTTL+
Sbjct: 531 LFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDG 590
Query: 609 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ + + M L G +P+ Y I+
Sbjct: 591 LIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 137/541 (25%), Positives = 234/541 (43%), Gaps = 47/541 (8%)
Query: 102 LVNSRWFTEALSL--MRNLIAKEG--IAPLELLEALMDESYQHCPAVFDALVRACTQVGA 157
+V R F ++ + N K+G + ELL + + + F+ L+ +VG
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 158 TEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
A ++ + G + ++N + L ++ ++L M F + TF
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMK---KMN 274
I A CK+ + A + ML+ G + V+ +IDG CK G AL +++ KM
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV--LGDMVKAGFEPSVRTYATLIDGYAR 332
++T P+S+ N I++ K G + EE+ LG + K G PSV TY TL+DG R
Sbjct: 542 ILT----TPHSL--NVILDMLSK--GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
G + S R+ + M G PN+ Y I+ L + G +EEA K+LS M D + P+ +
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
Y ++ +G NG L AL+ ++E + LN + I S G
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRA-----MVERGYELN---DRIYSSLLQGFVLSQKG--- 702
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ-----PNLTIYNSFINGLCK 507
D ++TV D + E N +I + EQ L I+ + LCK
Sbjct: 703 -----IDNSEESTVSD----IALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCK 751
Query: 508 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
TD + +LV + +R + + ++ Y + + + L T + G + ++
Sbjct: 752 EGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSF 811
Query: 568 NTLINLLCKNGCDEEAKEL-MKMMIMQGI--RPDCITYTTLITHFNKKHHPEEVIALHDY 624
+I L K G E A+EL M+++ G+ + +TY + ++ EVI L D
Sbjct: 812 CLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQ 871
Query: 625 M 625
+
Sbjct: 872 L 872
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 212/415 (51%), Gaps = 5/415 (1%)
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
+ +A+ V+ + K G P+V ++N +I+G CK +D A +V+ +M P++V+
Sbjct: 140 IPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMR---SKDFSPDTVT 195
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
YN +I C +G L LA +VL ++ +P+V TY LI+ G ++E+L+L DEM+
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
RGL P++ YN+I+ + + G ++ A +++ ++ K PD SY IL L G
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
E KL ++ + + +IL+ +C+ M +GL PD Y+ +I
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
C+ G + A+ MI P++ YN+ + LCK D A + +L +
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 528 -DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
+++++NT+ S +SG A + EM S G+ + +TYN++I+ LC+ G +EA EL
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 587 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ M P +TY ++ F K H E+ I + + M+ G P++ TY ++
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 225/503 (44%), Gaps = 38/503 (7%)
Query: 124 IAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNF 183
I L LLE ++ + Y + L++ + A V+ E+ + V A+N
Sbjct: 106 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNAL 164
Query: 184 LSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGT 243
++ ++N ID R+ M S + T+N+ I +LC ++ A+ V+ ++L D
Sbjct: 165 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 244 FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 303
P V+++ ++I+ G +D ALK+M + M + P+ +YN+II G CK+G +
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDE---MLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A E++ ++ G EP V +Y L+ G EE +L +M PN+V Y+ ++
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
L R G +EEA +L M +K + PD YSY L CR G L A++ ++ +
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
D + N +L +CK+ G + G P+ + T+ G+ +AL +
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSG 543
M+ P+ YNS I+ LC+ G
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCR----------------------------------EG 487
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
+DEAF L +M+S + VTYN ++ CK E+A +++ M+ G RP+ TYT
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547
Query: 604 TLITHFNKKHHPEEVIALHDYMI 626
LI + E + L + ++
Sbjct: 548 VLIEGIGFAGYRAEAMELANDLV 570
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 167/348 (47%), Gaps = 2/348 (0%)
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
C+ G + + +L MV+ G+ P V LI G+ ++ +++R+ E++E+ P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
YN+++ + +++A++VL M K PD +Y I+ LC G L ALK+ NQ
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+L + + IL+ M++RGL PD++T T+I G CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNT 534
++A + + +P++ YN + L + + L+ ++ K + T++
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 594
LI+ G+I+EA L MK GL+ + +Y+ LI C+ G + A E ++ MI G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 595 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
PD + Y T++ K ++ + + + G P+ +Y+ + +
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 179/364 (49%), Gaps = 3/364 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
L++L L+ ++ Q + L+ A G + A ++ E+ +RG + +N +
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
+ + +DR + + + + G +V ++N+ + AL + + E ++ +M + PN
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
VV+++++I C+ G ++ A+ ++K LM + P++ SY+ +I FC++G L +A E
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLK---LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
L M+ G P + Y T++ + G +++L + ++ E G PN YN++ L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
GD A ++ +M+ I PD+ +Y + LCR G + EA +L + +
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ NI+L CK+ SM+ G P+ T +I+G G +A+ L N +
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 487 IKMD 490
+++D
Sbjct: 570 VRID 573
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 140/280 (50%), Gaps = 3/280 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
++ L+RA G E ++ ++ + C +V ++ ++ L I+ L K M
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G + +++ I A C+E R+ AI + M+ DG P++V++N ++ CK G D
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
AL++ K+ + PNS SYN++ + G + A ++ +M+ G +P TY
Sbjct: 421 QALEIFGKLGEV---GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
++I R G ++E+ L +M P++V YN +L + +E+A VL M+
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
P++ +Y +L EG+ GY EA++L N +++ D I +
Sbjct: 538 GCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISE 577
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 2/285 (0%)
Query: 361 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 420
I + R G+ E+ +L M+ K PD L +G + +A+++ + KF
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 480
D F+ N L+N CK M ++ PD T +I C G + AL
Sbjct: 155 Q-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 481 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGY 539
++ N ++ + QP + Y I D A L+DE+ R L D T+NT+I G
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 540 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
G +D AF + ++ G + ++YN L+ L G EE ++LM M + P+
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 600 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+TY+ LIT + EE + L M KG+ PD +YD ++ F
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 6/239 (2%)
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
E + H+Q L F D L I + C+S +M+ +G PDV +I
Sbjct: 76 ERRQQHSQSLGF---RDTQMLKIF-HRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLI 131
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
G L N KA+R+ + K QP++ YN+ ING CKM D A ++D +R +
Sbjct: 132 KGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS 190
Query: 528 -DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
D T+N +I + G++D A + ++ S +TY LI G +EA +L
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 587 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
M M+ +G++PD TY T+I K+ + + + LKG PD +Y+ ++ L
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 240/490 (48%), Gaps = 18/490 (3%)
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
+R+R +V N + V +N D LY+ M N+ +FN+ I C +
Sbjct: 98 VRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM------------NL 275
+ +++ ++ K G P+VV+FN ++ G C + AL + M +
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQ 216
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
M + P +++N++ING C +G +L A ++ MV G V TY T+++G + G
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+ +L L +M E + P++V+Y++I+ L + G +A + S+M++K I P+ ++Y
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ +G C G ++A +L +++ ++ D + N L++ K M+ R
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
+ PD T ++I G CK + A +++ M P++ +N+ I+ C+ D
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 516 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
L+ E+ +R L+ + TT+NTLI G+ ++ A L EM S G+ + +T N L+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C+N EEA EL +++ M I D + Y +I K +E L + + GV PD
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 635 KTYDAIVTPF 644
+TY+ +++ F
Sbjct: 573 QTYNVMISGF 582
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 236/497 (47%), Gaps = 23/497 (4%)
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKEC 226
++ R ++++++N + + + + + + G +V TFN ++ LC E
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 227 RV---------------VEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMK 271
R+ +EA+ + +M++ G P V++FN +I+G C G + L+
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV---LEAAA 247
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
+N M G + + V+Y +I+NG CK G A +L M + +P V Y+ +ID
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 332 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 391
+ G ++ L EM+E+G+ PN+ YN ++ G +A ++L DMI++ I PD
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
++ L + G L EA KL +++L + D + N ++ CK M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 452 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 511
+ PDV T T+ID C+ ++ ++L + + N T YN+ I+G C++ +
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 512 DVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 570
+ A++L E+ + D T N L+ G+ + +++EA L ++ + + V YN +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 571 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 630
I+ +CK +EA +L + + G+ PD TY +I+ F K + L M G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 631 IPDQKTYDAIVTPFLLA 647
PD TY+ ++ L A
Sbjct: 604 EPDNSTYNTLIRGCLKA 620
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 12/441 (2%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L+ M G V TFN I LC E RV+EA ++ +M+ G +VV++ I++G C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K G AL ++ KM + P+ V Y++II+ CK G A+ + +M++ G P
Sbjct: 273 KMGDTKSALNLLSKME---ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+V TY +IDG+ +G ++ RL +M+ER + P+++ +N+++ + G + EA K+
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE--DAFSLNILLNYIC 436
+M+ + I PD +Y + G C++ +A + FDL+ D + N +++ C
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM------FDLMASPDVVTFNTIIDVYC 443
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
++ + RGL + T T+I G C++ N A L+ MI P+
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 497 IYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEM 555
N + G C+ + A L + ++ K+ LD +N +I G ++DEA+ L +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 556 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 615
G+ + TYN +I+ C +A L M G PD TY TLI K
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 616 EEVIALHDYMILKGVIPDQKT 636
++ I L M G D T
Sbjct: 624 DKSIELISEMRSNGFSGDAFT 644
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 210/459 (45%), Gaps = 50/459 (10%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL-------------- 275
+AI M++ F V N +I + D+A+ + +KM +
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 276 ------------------MTGNSVWPNSVSYNSIINGFCKKG---------------GLL 302
+T P+ V++N++++G C + G L
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 303 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
A + MV+ G P V T+ TLI+G G + E+ L ++MV +GL ++V Y +I+
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
+ + GD + A +LS M + HI PD Y+ + + LC++G+ ++A L +++L+ +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
+ F+ N +++ C MI R + PDV T +I + K G +A +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNS 542
+ M+ P+ YNS I G CK D AK++ D + D TFNT+I Y +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP---DVVTFNTIIDVYCRA 445
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
++DE L E+ GL AN TYNTLI+ C+ A++L + MI G+ PD IT
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
L+ F + EE + L + + + + D Y+ I+
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 202/460 (43%), Gaps = 40/460 (8%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVG 156
TLL L +EAL+L ++ + + L + +++ F+ L+ G
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 157 ATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFN 216
A ++ ++ +G + V + ++ + ++ D L M +V ++
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 217 LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM--- 273
I LCK+ +A + ML+ G PNV ++N +IDG C G A ++++ M
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 274 ----NLMTGNS-------------------------VWPNSVSYNSIINGFCKKGGLLLA 304
+++T N+ ++P++V+YNS+I GFCK A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
+ + M P V T+ T+ID Y R ++E ++L E+ RGL N YN++++
Sbjct: 421 KHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN--QILKFDLI 422
++ A + +MI +CPD + IL G C N L EAL+L Q+ K DL
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL- 535
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
D + NI+++ +CK S+ G+ PDV T +I G C A L
Sbjct: 536 -DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
++ M +P+ + YN+ I G K D + L+ E+R
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 123/264 (46%), Gaps = 7/264 (2%)
Query: 214 TFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM 273
T+N IY CK R +A + M P+VV+FN IID C+ +D +++++++
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 274 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 333
+ + N+ +YN++I+GFC+ L A+++ +M+ G P T L+ G+
Sbjct: 459 ---SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 334 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 393
LEE+L L + + + + V YN I++ + + ++EA + + + PD +Y
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 394 AILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 453
++ G C +++A L +++ D + N L+ K+ M +
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Query: 454 RGLPPDVYTKATVIDGNCKLGNTE 477
G D +T + C++ + E
Sbjct: 636 NGFSGDAFTIKMAEEIICRVSDEE 659
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 240/490 (48%), Gaps = 18/490 (3%)
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
+R+R +V N + V +N D LY+ M N+ +FN+ I C +
Sbjct: 98 VRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM------------NL 275
+ +++ ++ K G P+VV+FN ++ G C + AL + M +
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQ 216
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
M + P +++N++ING C +G +L A ++ MV G V TY T+++G + G
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 276
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+ +L L +M E + P++V+Y++I+ L + G +A + S+M++K I P+ ++Y
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ +G C G ++A +L +++ ++ D + N L++ K M+ R
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
+ PD T ++I G CK + A +++ M P++ +N+ I+ C+ D
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 516 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
L+ E+ +R L+ + TT+NTLI G+ ++ A L EM S G+ + +T N L+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C+N EEA EL +++ M I D + Y +I K +E L + + GV PD
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 635 KTYDAIVTPF 644
+TY+ +++ F
Sbjct: 573 QTYNVMISGF 582
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 236/497 (47%), Gaps = 23/497 (4%)
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKEC 226
++ R ++++++N + + + + + + G +V TFN ++ LC E
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 227 RV---------------VEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMK 271
R+ +EA+ + +M++ G P V++FN +I+G C G + L+
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV---LEAAA 247
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
+N M G + + V+Y +I+NG CK G A +L M + +P V Y+ +ID
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 332 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 391
+ G ++ L EM+E+G+ PN+ YN ++ G +A ++L DMI++ I PD
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
++ L + G L EA KL +++L + D + N ++ CK M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 452 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 511
+ PDV T T+ID C+ ++ ++L + + N T YN+ I+G C++ +
Sbjct: 428 AS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 512 DVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 570
+ A++L E+ + D T N L+ G+ + +++EA L ++ + + V YN +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 571 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 630
I+ +CK +EA +L + + G+ PD TY +I+ F K + L M G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 631 IPDQKTYDAIVTPFLLA 647
PD TY+ ++ L A
Sbjct: 604 EPDNSTYNTLIRGCLKA 620
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 12/441 (2%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L+ M G V TFN I LC E RV+EA ++ +M+ G +VV++ I++G C
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K G AL ++ KM + P+ V Y++II+ CK G A+ + +M++ G P
Sbjct: 273 KMGDTKSALNLLSKME---ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+V TY +IDG+ +G ++ RL +M+ER + P+++ +N+++ + G + EA K+
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE--DAFSLNILLNYIC 436
+M+ + I PD +Y + G C++ +A + FDL+ D + N +++ C
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM------FDLMASPDVVTFNTIIDVYC 443
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
++ + RGL + T T+I G C++ N A L+ MI P+
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 497 IYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEM 555
N + G C+ + A L + ++ K+ LD +N +I G ++DEA+ L +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 556 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 615
G+ + TYN +I+ C +A L M G PD TY TLI K
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 616 EEVIALHDYMILKGVIPDQKT 636
++ I L M G D T
Sbjct: 624 DKSIELISEMRSNGFSGDAFT 644
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 210/459 (45%), Gaps = 50/459 (10%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL-------------- 275
+AI M++ F V N +I + D+A+ + +KM +
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 276 ------------------MTGNSVWPNSVSYNSIINGFCKKG---------------GLL 302
+T P+ V++N++++G C + G L
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 303 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
A + MV+ G P V T+ TLI+G G + E+ L ++MV +GL ++V Y +I+
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
+ + GD + A +LS M + HI PD Y+ + + LC++G+ ++A L +++L+ +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
+ F+ N +++ C MI R + PDV T +I + K G +A +L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNS 542
+ M+ P+ YNS I G CK D AK++ D + D TFNT+I Y +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP---DVVTFNTIIDVYCRA 445
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
++DE L E+ GL AN TYNTLI+ C+ A++L + MI G+ PD IT
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
L+ F + EE + L + + + + D Y+ I+
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 215/488 (44%), Gaps = 42/488 (8%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVG 156
TLL L +EAL+L ++ + + L + +++ F+ L+ G
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 157 ATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFN 216
A ++ ++ +G + V + ++ + ++ D L M +V ++
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 217 LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM--- 273
I LCK+ +A + ML+ G PNV ++N +IDG C G A ++++ M
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 274 ----NLMTGNS-------------------------VWPNSVSYNSIINGFCKKGGLLLA 304
+++T N+ ++P++V+YNS+I GFCK A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
+ + M P V T+ T+ID Y R ++E ++L E+ RGL N YN++++
Sbjct: 421 KHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN--QILKFDLI 422
++ A + +MI +CPD + IL G C N L EAL+L Q+ K DL
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL- 535
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
D + NI+++ +CK S+ G+ PDV T +I G C A L
Sbjct: 536 -DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSN 541
++ M +P+ + YN+ I G K D + L+ E+R DA T +++
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLIT 653
Query: 542 SGQIDEAF 549
G++D++F
Sbjct: 654 DGRLDKSF 661
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 223/440 (50%), Gaps = 7/440 (1%)
Query: 159 EGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLA 218
E D+ C++ L S+ ++ LS + + + D L+ M G ++ ++N+
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTG 278
I LC+ R V A++V+ +M+K G P+VV+ + +I+G C+ + A+ ++ KM M
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM-- 168
Query: 279 NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
P+ V YN+II+G CK G + A E+ M + G TY +L+ G G +
Sbjct: 169 -GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 339 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
+ RL +MV R + PN++ + +++ + G EA K+ +M + + PD ++Y L
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 399 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
GLC +G + EA ++ + ++ + D + N L+N CKS M RGL
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
D T T+I G + G + A +++ +MD +PN+ Y+ + GLC + A L
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 519 DELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 577
+ ++K ++ LD TT+N +I G G +++A+ L + GL + V+Y T+I+ C+
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Query: 578 GCDEEAKELMKMMIMQGIRP 597
+++ L + M G+ P
Sbjct: 465 RQWDKSDLLYRKMQEDGLLP 484
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 220/437 (50%), Gaps = 38/437 (8%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM-TGNSVWPNSVSY 288
E I + +M++ P++V F+ ++ K+ + DL + + M + G+ ++ SY
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLY----SY 107
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
N +IN C+ ++A V+G M+K G+EP V T ++LI+G+ + + +++ L +M E
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
G P++V+YN+I+ + G + +A ++ M + D +Y L GLC +G ++
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A +L ++ D++ + + +++ K M R + PDV+T ++I+
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL- 527
G C G ++A ++ + M+ P++ YN+ ING CK D L E+ +R L+
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKS-----------LGLSAN-RV---------- 565
D T+NT+I GY +G+ D A + + M S GL N RV
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Query: 566 ----------TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 615
TYN +I+ +CK G E+A +L + + +G++PD ++YTT+I+ F +K
Sbjct: 408 QKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQW 467
Query: 616 EEVIALHDYMILKGVIP 632
++ L+ M G++P
Sbjct: 468 DKSDLLYRKMQEDGLLP 484
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 155/314 (49%), Gaps = 1/314 (0%)
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
+LEE + L +M++ P+IV ++ +L + + + + + M I D YSY
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
I+ LCR AL + +++KF D +++ L+N C+ M
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDV 513
G PDV T+IDG+CK+G A+ L++ M + + + YNS + GLC +D
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 514 AKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
A+ + D + + + + TF +I + G+ EA L EM + + TYN+LIN
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
LC +G +EAK+++ +M+ +G PD +TY TLI F K +E L M +G++ D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 634 QKTYDAIVTPFLLA 647
TY+ I+ + A
Sbjct: 349 TITYNTIIQGYFQA 362
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 190/397 (47%), Gaps = 21/397 (5%)
Query: 90 HSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALV 149
H L+S ++ L F ALS++ ++ K G P + + + + VFDA+
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMM-KFGYEPDVVTVSSLINGFCQGNRVFDAI- 159
Query: 150 RACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHV 209
D++ ++ G V +N + ++ ++ L+ M G
Sbjct: 160 -------------DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206
Query: 210 ENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKV 269
+ T+N + LC R +A ++ M+ PNV++F +ID K G A+K+
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
++ MT V P+ +YNS+ING C G + A+++L MV G P V TY TLI+G
Sbjct: 267 YEE---MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
+ + ++E +L EM +RGL + + YN+I+ ++ G + A ++ S M + P+
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PN 380
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
+Y+IL GLC N + +AL L + K ++ D + NI+++ +CK
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 450 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
S+ +GL PDV + T+I G C+ +K+ LY M
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 22/285 (7%)
Query: 104 NSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYD 163
+ RW ++A LMR+++ ++ I P + F A++ + G A
Sbjct: 222 SGRW-SDAARLMRDMVMRD-IVPNVI--------------TFTAVIDVFVKEGKFSEAMK 265
Query: 164 VICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALC 223
+ E+ R V +N+ ++ L +D ++ M + G + +V T+N I C
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 224 KECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP 283
K RV E + M + G + +++N II G + G D A ++ +M+ P
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD------SRP 379
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
N +Y+ ++ G C + A + +M K+ E + TY +I G + G++E++ L
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 388
+ +GL P++V Y +++ R +++ + M + + P
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 150/582 (25%), Positives = 263/582 (45%), Gaps = 31/582 (5%)
Query: 26 NPTAAAEDIIFRAICVHLKHRRWSALEQLSPKLTTFMVNRVVSEFHNS---PHLALDFYN 82
+P D+ A + +H WS +L +T N + + +S P L L +Y+
Sbjct: 35 SPCPPRYDVAVIADLIEKQH--WS---KLGVHVTDINPNELFRQLISSELDPDLCLRYYS 89
Query: 83 WV--GMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQH 140
W+ SL + LL L N++ +++ S + + + + +
Sbjct: 90 WLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNV 149
Query: 141 C--PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWR 198
C + D LV A E ++ G +S + + L++ N
Sbjct: 150 CVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEY 209
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
+YK M NV TFN+ I ALCK ++ +A V+ M G PNVVS+N +IDG C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K G K + M N V PN ++N +I+GF K L + +V +M+ +P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+V +Y +LI+G G + E++ + D+MV G+ PN++ YN+++ ++ ++EA +
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
+ + P Y +L + C+ G + + L ++ + ++ D + N L+ +C++
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
+ ++GL PD+ T +++G C+ G + KA L M KM +P Y
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKLL--DATTFNTLISGYSNSGQIDEAFGLTTEMK 556
N + G CK + A N+ ++ K + L + ++N L+ GYS G++++A L EM
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 598
GL NR+TY + EE M+ QG PD
Sbjct: 569 EKGLVPNRITYEIV---------KEE-------MVDQGFVPD 594
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 190/369 (51%), Gaps = 4/369 (1%)
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
M + PN ++N +IN CK G + A +V+ DM G P+V +Y TLIDGY + G
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 336 ---LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
+ ++ + EMVE + PN+ +N ++ ++ ++ + KV +M+D+ + P+ S
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
Y L GLC G ++EA+ + ++++ + + + N L+N CK+ GS+
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 512
+G P +ID CKLG + L M + P++ YN I GLC+ + +
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 513 VAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
AK L D+L + L D TF+ L+ GY G+ +A L EM +GL +TYN ++
Sbjct: 454 AAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMK 513
Query: 573 LLCKNGCDEEAKEL-MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 631
CK G + A + +M + +R + +Y L+ +++K E+ L + M+ KG++
Sbjct: 514 GYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Query: 632 PDQKTYDAI 640
P++ TY+ +
Sbjct: 574 PNRITYEIV 582
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR-- 402
EM+ R + PN+ +N ++ L + G M +A V+ DM P+ SY L +G C+
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 403 -NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 461
NG + +A + ++++ D+ + + NIL++ K M+ + + P+V
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
+ ++I+G C G +A+ + + M+ QPNL YN+ ING CK A ++ +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 522 RKRKLLDATT-FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
+ + + T +N LI Y G+ID+ F L EM+ G+ + TYN LI LC+NG
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
E AK+L + +G+ PD +T+ L+ + +K + L M G+ P TY+ +
Sbjct: 453 EAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511
Query: 641 VTPF 644
+ +
Sbjct: 512 MKGY 515
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 10/238 (4%)
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 471
++ ++++ + + F+ N+++N +CK+ M G P+V + T+IDG C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 472 KLGNTEKALR---LYNGMIKMDEQPNLTIYNSFINGLCK----MASTDVAKNLVDELRKR 524
KLG K + + M++ D PNLT +N I+G K S V K ++D+ K
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 525 KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
++ ++N+LI+G N G+I EA + +M S G+ N +TYN LIN CKN +EA
Sbjct: 330 NVI---SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
++ + QG P Y LI + K ++ AL + M +G++PD TY+ ++
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 163/624 (26%), Positives = 280/624 (44%), Gaps = 58/624 (9%)
Query: 71 HNSPHLALDFYNWVGMLFPHSLHSSC-------TLLQVLVNS-RWFTEALSLMRNLIAKE 122
N P AL + NWV LH C L+ +L++S A +L+ ++
Sbjct: 90 RNDPVSALQYCNWV-----KPLHRLCEGGDVFWVLIHILLSSIHTHDRASNLLVMFVSNN 144
Query: 123 G-IAPLELLEALMDES----YQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSV 177
+ P ++ L+D S ++ P F+ L+ A + + A D + R + V
Sbjct: 145 PTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFV 204
Query: 178 HAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYR 237
NN LS LV N ID +Y M G + T L + A +E + EA+ + R
Sbjct: 205 PYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRR 264
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
++ G P+ + F++ + ACKT L +AL ++++M G V + +Y S+I F K
Sbjct: 265 VMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLG--VPASQETYTSVIVAFVK 322
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
+G + A V+ +MV G SV +L++GY + L ++L L + M E GL P+ V+
Sbjct: 323 EGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVM 382
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN--- 414
++ ++ W ++ +ME+A + M I P + +G + AL++ N
Sbjct: 383 FSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSF 442
Query: 415 ------------------------------QILKFDLIED--AFSLNILLNYICKSXXXX 442
++++ IE F N++L + C+
Sbjct: 443 ESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH-CRMKNMD 501
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M+ +GL P+ +T + +IDG K + + A + N M + + N IYN+ I
Sbjct: 502 LARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTII 561
Query: 503 NGLCKMASTDVAKNLVDEL--RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
NGLCK+ T AK ++ L KR + T++N++I G+ G D A EM G
Sbjct: 562 NGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK 621
Query: 561 SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA 620
S N VT+ +LIN CK+ + A E+ M ++ D Y LI F KK+ +
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYT 681
Query: 621 LHDYMILKGVIPDQKTYDAIVTPF 644
L + G++P+ Y+++++ F
Sbjct: 682 LFSELPELGLMPNVSVYNSLISGF 705
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 136/594 (22%), Positives = 268/594 (45%), Gaps = 60/594 (10%)
Query: 85 GMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAV 144
G+LF ++ ++C +++ AL L+R + K G+ + E+Y
Sbjct: 274 GLLFSLAVQAACKTPDLVM-------ALDLLREMRGKLGVPASQ-------ETYT----- 314
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
+++ A + G E A V+ E+ G +SV A + ++ + N++ + L+ M
Sbjct: 315 --SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA------- 257
G + F++ + CK + +AI RM P+ V + +I G
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 258 ---------------------------CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNS 290
CK G +D A +K +M + PN V YN+
Sbjct: 433 AALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLK---MMEQKGIEPNVVFYNN 489
Query: 291 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
++ C+ + LA + +M++ G EP+ TY+ LIDG+ + + + + ++M
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMI-DKHICPDQYSYAILTEGLCRNGYLTEA 409
N V+YN+I+ L + G +A ++L ++I +K SY + +G + G A
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSA 609
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
++ + ++ + + + L+N CKS M + L D+ +IDG
Sbjct: 610 VETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDG 669
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LD 528
CK + + A L++ + ++ PN+++YNS I+G + D A +L ++ + D
Sbjct: 670 FCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCD 729
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
T+ T+I G G I+ A L +E+ LG+ + + + L+N L K G +A ++++
Sbjct: 730 LFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLE 789
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
M + + P+ + Y+T+I +++ + E LHD M+ KG++ D ++ +V+
Sbjct: 790 EMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 202/438 (46%), Gaps = 29/438 (6%)
Query: 73 SPHLALDFYN-----WVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPL 127
SP AL+ +N W+ F C + +L + +A + ++ ++GI P
Sbjct: 430 SPEAALEIFNDSFESWIAHGF------MCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
+ ++ ++ A ++ + A + E+ +G + ++ +
Sbjct: 484 VVF--------------YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 188 VEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFP-N 246
+ D W + M + N +N I LCK + +A ++ ++K+ + +
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
S+N IIDG K G D A++ ++M + N PN V++ S+INGFCK + LA E
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREM---SENGKSPNVVTFTSLINGFCKSNRMDLALE 646
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ +M + + Y LIDG+ + ++ + L E+ E GL PN+ VYNS++
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
G M+ A + M++ I D ++Y + +GL ++G + A L++++L ++ D
Sbjct: 707 NLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEI 766
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+L+N + K M + + P+V +TVI G+ + GN +A RL++ M
Sbjct: 767 LHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Query: 487 IKMDEQPNLTIYNSFING 504
++ + T++N ++G
Sbjct: 827 LEKGIVHDDTVFNLLVSG 844
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 250/564 (44%), Gaps = 46/564 (8%)
Query: 64 NRVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEG 123
N V+ + P+ AL ++ W + S T+ VL+ + F A + +I G
Sbjct: 73 NLVLLSLESEPNSALKYFRWAEI--SGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRG 130
Query: 124 IAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNF 183
+L ++ D S F L+ C + G + A ++ G ++ +
Sbjct: 131 -KDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRM 187
Query: 184 LSHLVEVNDIDRFWRLYKGMGSFG-HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDG 242
L+ L+ + +D + + G V+ + AL + V +A+ +++ G
Sbjct: 188 LNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERG 247
Query: 243 TFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL 302
+VS N ++ G S+D + ++L+ PN V++ ++INGFCK+G +
Sbjct: 248 FRVGIVSCNKVLKGL----SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 303 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
A ++ M + G EP + Y+TLIDGY + G L +L + + +G+ ++VV++S +
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
+ GD+ AS V M+ + I P+ +Y IL +GLC++G + EA ++ QILK
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK---- 419
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
RG+ P + T +++IDG CK GN L
Sbjct: 420 -------------------------------RGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL-VDELRKRKLLDATTFNTLISGYSN 541
Y MIKM P++ IY ++GL K A V L + L+ FN+LI G+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
+ DEA + M G+ + T+ T++ + G EEA L M G+ PD +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 602 YTTLITHFNKKHHPEEVIALHDYM 625
Y TLI F K P + L D M
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLM 592
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/573 (24%), Positives = 244/573 (42%), Gaps = 43/573 (7%)
Query: 102 LVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPA----VFDALVRACTQVGA 157
LV R F + ++ + +E+ L+ PA F L+ + G
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 158 TEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
+ A+D+ + RG + A++ + + + +L+ G +V F+
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
I K + A V RML G PNVV++ ++I G C+ G + A + ++
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI---L 418
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
+ P+ V+Y+S+I+GFCK G L + DM+K G+ P V Y L+DG ++ G +
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
++R +M+ + + N+VV+NS++ R +EA KV M I PD ++ +
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
G L EAL L ++ K L DA + L++ CK M +
Sbjct: 539 RVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKIS 598
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
D+ VI K E A + +N +I+ +P++ YN+ I G C + D A+ +
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 518 VDELR------------------------------------KRKLLDATTFNTLISGYSN 541
+ L+ K +A T+ L+ +S
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
S I+ +F L EM+ G+S + V+Y+ +I+ LCK G +EA + I + PD +
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 602 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
Y LI + K E L+++M+ GV PD
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 224/507 (44%), Gaps = 40/507 (7%)
Query: 171 RGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVE 230
RG V + + N L L V+ I+ RL + G NV TF I CK +
Sbjct: 246 RGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 231 AITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNS 290
A + M + G P++++++ +IDG K G L + K+ + V + V ++S
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA---LHKGVKLDVVVFSS 361
Query: 291 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
I+ + K G L A V M+ G P+V TY LI G + G + E+ + ++++RG
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
+ P+IV Y+S++ + G++ + DMI PD Y +L +GL + G + A+
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
+ ++L + + N L++ C+ M G+ PDV T TV+ +
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL--- 527
G E+AL L+ M KM +P+ Y + I+ CK + L D +++ K+
Sbjct: 542 IMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADI 601
Query: 528 ---------------------------------DATTFNTLISGYSNSGQIDEAFGLTTE 554
D T+NT+I GY + ++DEA +
Sbjct: 602 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 661
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
+K N VT LI++LCKN + A + +M +G +P+ +TY L+ F+K
Sbjct: 662 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 721
Query: 615 PEEVIALHDYMILKGVIPDQKTYDAIV 641
E L + M KG+ P +Y I+
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIII 748
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 195/427 (45%), Gaps = 4/427 (0%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
+ L++ Q G A+ + ++ RG S+ +++ + + ++ + LY+ M
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G+ +V + + + L K+ ++ A+ +ML NVV FN +IDG C+ D
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
ALKV + M + + P+ ++ +++ +G L A + M K G EP Y
Sbjct: 514 EALKVFRLMGIY---GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
TLID + + L+L D M + +I V N +++ L++ +E+ASK +++I+
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
+ PD +Y + G C L EA ++ + + +L IL++ +CK+
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
M +G P+ T ++D K + E + +L+ M + P++ Y+ I+G
Sbjct: 691 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 505 LCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
LCK D A N+ + KLL D + LI GY G++ EA L M G+ +
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Query: 564 RVTYNTL 570
+ L
Sbjct: 811 DLLQRAL 817
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 172/368 (46%), Gaps = 3/368 (0%)
Query: 279 NSVWPNSVS-YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
+ P+ VS + +++ KG + A + +++ GF + + ++ G + +E
Sbjct: 210 GGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIE 268
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
+ RL +++ G PN+V + +++ + G+M+ A + M + I PD +Y+ L
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
+G + G L KL +Q L + D + ++ KS M+ +G+
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
P+V T +I G C+ G +A +Y ++K +P++ Y+S I+G CK + L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 518 VDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
+++ K D + L+ G S G + A + +M + N V +N+LI+ C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
+EA ++ ++M + GI+PD T+TT++ + EE + L M G+ PD
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 637 YDAIVTPF 644
Y ++ F
Sbjct: 569 YCTLIDAF 576
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 8/222 (3%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
++ N+ I+ L K R+ +A +++ P++V++N +I G C LD A ++
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
+ L+ PN+V+ +I+ CK + A + M + G +P+ TY L+D +
Sbjct: 660 E---LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
++ +E S +L +EM E+G+ P+IV Y+ I+ L + G ++EA+ + ID + PD
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKF-----DLIEDAFS 427
+YAIL G C+ G L EA L+ +L+ DL++ A S
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALS 818
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF-PNVVSFNMIIDGACKTGSLDLALKV 269
++ T+N I C R+ EA I+ +LK F PN V+ ++I CK +D A+++
Sbjct: 635 DIVTYNTMICGYCSLRRLDEA-ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
++M PN+V+Y +++ F K + + ++ +M + G PS+ +Y+ +IDG
Sbjct: 694 F---SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
+ G ++E+ + + ++ L P++V Y ++ + G + EA+ + M+ + PD
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Query: 390 QYSYAILTE 398
L+E
Sbjct: 811 DLLQRALSE 819
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 163/617 (26%), Positives = 267/617 (43%), Gaps = 114/617 (18%)
Query: 136 ESYQHCPAV--FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDI 193
E H P V F LV A + G A+D + +R +G L ++H +N + L+ V+ +
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 194 DRFWRLYKGMGSFG--------------------HVENVNTF---------------NLA 218
D L+ M S G V + TF N +
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTG 278
+Y+L K R EA + Y + G P+ V++NM++ K G +D A+K++ + M
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE---MME 531
Query: 279 NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
N P+ + NS+IN K + A ++ M + +P+V TY TL+ G + G ++E
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 339 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
++ L + MV++G PN + +N++ L ++ ++ A K+L M+D PD ++Y +
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 399 GLCRNGYLTEALKLHNQ------------------ILKFDLIEDAFSLNILLNYICKSXX 440
GL +NG + EA+ +Q ++K LIEDA+ + Y C
Sbjct: 652 GLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Query: 441 XXXX-XXXXGSMITR-GLPPDV-YTKATVIDG---------------NCKLGNTEKALRL 482
GS++ G+ V +++ V +G +CK N A L
Sbjct: 712 ANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 483 YNGMIK-MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYS 540
+ K + QP L YN I GL + ++A+++ +++ + D T+N L+ Y
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYN-------------------------------- 568
SG+IDE F L EM + AN +T+N
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 569 ----TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDY 624
LI+ L K+G EAK+L + M+ G RP+C Y LI F K + AL
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 625 MILKGVIPDQKTYDAIV 641
M+ +GV PD KTY +V
Sbjct: 952 MVKEGVRPDLKTYSVLV 968
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/582 (24%), Positives = 268/582 (46%), Gaps = 33/582 (5%)
Query: 88 FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAP-LELLEALMD----------- 135
F + +S L+ +L+ SR+ TEA+ + R +I EG P L+ +LM
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMIL-EGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 136 -------ESYQHCPAV--FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
E+ P V F +R + G AY+++ + GC V + +
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIY-RMLKDGTFP 245
L +D +++ M + H + T+ + + + R ++++ + M KDG P
Sbjct: 303 LCTARKLDCAKEVFEKMKTGRHKPDRVTY-ITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+VV+F +++D CK G+ A +++M + PN +YN++I G + L A
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDT---LDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
E+ G+M G +P+ TY ID Y + G +L ++M +G+ PNIV N+ LY L
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ G EA ++ + D + PD +Y ++ + + G + EA+KL +++++ D
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
+N L+N + K+ M L P V T T++ G K G ++A+ L+ G
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVA-KNLVDELRKRKLLDATTFNTLISGYSNSGQ 544
M++ PN +N+ + LCK +A K L + + D T+NT+I G +GQ
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPDCITYT 603
+ EA +MK L + + VT TL+ + K E+A +++ + +P + +
Sbjct: 659 VKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 604 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
LI + + ++ + ++ G+ D D+I+ P +
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDG---DSILVPII 756
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 226/487 (46%), Gaps = 4/487 (0%)
Query: 156 GATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
G + A + ++R G +++ +++N + L++ +Y+ M G ++ T+
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL 275
+ + L K + + ++ M G PNV +F + I + G ++ A +++K+M+
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD- 285
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
P+ V+Y +I+ C L A+EV M +P TY TL+D ++
Sbjct: 286 --DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
L+ + EM + G P++V + ++ L + G+ EA L M D+ I P+ ++Y
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L GL R L +AL+L + + A++ + ++Y KS M T+G
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
+ P++ + K G +A +++ G+ + P+ YN + K+ D A
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523
Query: 516 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
L+ E+ + D N+LI+ + ++DEA+ + MK + L VTYNTL+ L
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
KNG +EA EL + M+ +G P+ IT+ TL K + + M+ G +PD
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 635 KTYDAIV 641
TY+ I+
Sbjct: 644 FTYNTII 650
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/538 (25%), Positives = 228/538 (42%), Gaps = 45/538 (8%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
++ +++ ++VG + A ++ E+ GC V N+ ++ L + + +D W+++ M
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
V T+N + L K ++ EAI + M++ G PN ++FN + D CK +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
LALK++ KM M P+ +YN+II G K G + A M K + P T
Sbjct: 626 LALKMLFKMMDM---GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLC 681
Query: 325 TLIDGYARWGSLEESLRL-------CDE--------------MVERGL-----FPNIVVY 358
TL+ G + +E++ ++ C + + E G+ F +V
Sbjct: 682 TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA 741
Query: 359 NS-----------ILYWLYRHGDMEEASKVLSDMI-DKHICPDQYSYAILTEGLCRNGYL 406
N I+ + +H ++ A + D + P +Y +L GL +
Sbjct: 742 NGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 801
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
A + Q+ I D + N LL+ KS M T + T V
Sbjct: 802 EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 467 IDGNCKLGNTEKALRL-YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
I G K GN + AL L Y+ M D P Y I+GL K AK L + +
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 526 LL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
+ +N LI+G+ +G+ D A L M G+ + TY+ L++ LC G +E
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM-ILKGVIPDQKTYDAIV 641
K + G+ PD + Y +I K H EE + L + M +G+ PD TY++++
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 18/390 (4%)
Query: 234 VIYRMLKDGTFPNVVSFN--MIIDGACKTGSLDLA--LKVMKKMNLMTGN---------- 279
+I +L + N VSF+ ++ +G C+ G L ++ K N ++G
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 280 -SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
V P +YN +I G + + +A++V + G P V TY L+D Y + G ++E
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 339 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD-MIDKHICPDQYSYAILT 397
L EM N + +N ++ L + G++++A + D M D+ P +Y L
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
+GL ++G L EA +L +L + + NIL+N K+ M+ G+
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
PD+ T + ++D C +G ++ L + + + P++ YN INGL K + A L
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 518 VDELRKRKLL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
+E++ + + D T+N+LI +G ++EA + E++ GL N T+N LI
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
+G E A + + M+ G P+ TY L
Sbjct: 1079 LSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 169/361 (46%), Gaps = 39/361 (10%)
Query: 214 TFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM 273
T+NL I L + + A V ++ G P+V ++N ++D K+G +D ++ K+M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 274 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD-MVKAGFEPSVRTYATLIDGYAR 332
+ + N++++N +I+G K G + A ++ D M F P+ TY LIDG ++
Sbjct: 847 ---STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK 903
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
G L E+ +L + M++ G PN +YN ++ + G+ + A + M+ + + PD +
Sbjct: 904 SGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 963
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
Y++L + LC G + E L ++ + L D N+++N + KS M
Sbjct: 964 YSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Query: 453 T-RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 511
T RG+ PD+YT ++I G E+A ++YN + + +PN+
Sbjct: 1024 TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV---------------- 1067
Query: 512 DVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 571
TFN LI GYS SG+ + A+ + M + G S N TY L
Sbjct: 1068 ------------------FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLP 1109
Query: 572 N 572
N
Sbjct: 1110 N 1110
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 202/467 (43%), Gaps = 41/467 (8%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
+ NT+ +L + + +A + +M + G N S+N +I K+ A++V
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
++M L P+ +Y+S++ G K+ + +L +M G +P+V T+ I
Sbjct: 212 RRMIL---EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY------------------RHG--- 369
R G + E+ + M + G P++V Y ++ L RH
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 370 --------------DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
D++ + S+M PD ++ IL + LC+ G EA +
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+ ++ + + N L+ + + G+M + G+ P YT ID K G+
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNT 534
+ AL + M PN+ N+ + L K AK + L+ L+ D+ T+N
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK-NGCDEEAKELMKMMIMQ 593
++ YS G+IDEA L +EM G + + N+LIN L K + DE K M+M M+
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 594 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
++P +TY TL+ K +E I L + M+ KG P+ T++ +
Sbjct: 569 -LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 163/369 (44%), Gaps = 1/369 (0%)
Query: 274 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 333
+LM + ++ +Y +I KGGL A L M + GF + +Y LI +
Sbjct: 142 DLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKS 201
Query: 334 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 393
E++ + M+ G P++ Y+S++ L + D++ +L +M + P+ Y++
Sbjct: 202 RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF 261
Query: 394 AILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 453
I L R G + EA ++ ++ D + +L++ +C + M T
Sbjct: 262 TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKT 321
Query: 454 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 513
PD T T++D + + + ++ M K P++ + ++ LCK +
Sbjct: 322 GRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381
Query: 514 AKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
A + +D +R + +L + T+NTLI G ++D+A L M+SLG+ TY I+
Sbjct: 382 AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFID 441
Query: 573 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
K+G A E + M +GI P+ + + K E + + G++P
Sbjct: 442 YYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP 501
Query: 633 DQKTYDAIV 641
D TY+ ++
Sbjct: 502 DSVTYNMMM 510
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 140/339 (41%), Gaps = 2/339 (0%)
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSILYWLYR 367
G M++ +P + + + G + + S + L N +L L
Sbjct: 71 GSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRV 130
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
G +EE + V M + I D +Y + + L G L +A ++ +F + +A+S
Sbjct: 131 DGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYS 190
Query: 428 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
N L++ + KS MI G P + T ++++ G K + + + L M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 546
+ +PN+ + I L + + A ++ + D T+ LI + ++D
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 547 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
A + +MK+ +RVTY TL++ N + K+ M G PD +T+T L+
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 607 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
K + E D M +G++P+ TY+ ++ L
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 204/405 (50%), Gaps = 39/405 (9%)
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M G+ ++ T N + C R+ +A+ ++ +M++ G P+ V+F +I G
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
A+ ++ +M P+ V+Y +++NG CK+G LA +L M A E +V
Sbjct: 199 ASEAVALIDRM---VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
Y+T+ID ++ +++L L EM +G+ PN++ Y+S++ L +G +AS++LSDMI
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
++ I P+ +++ L + + G L +A KL+ +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE--------------------------- 348
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
MI R + P+++T +++I+G C L +A ++ MI+ D PN+ YN+ I
Sbjct: 349 --------MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 503 NGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
NG CK D L E+ +R L+ T T+ TLI G+ + D A + +M S+G+
Sbjct: 401 NGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
N +TYN L++ LCKNG +A + + + + PD TY +I
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 216/449 (48%), Gaps = 41/449 (9%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
+AI + M + FP+++ F+ ++ K DL + +KM ++ + N +YN
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEIL---GISHNLYTYN 117
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
+IN FC+ L LA +LG M+K G+EP + T +L++G+ + +++ L D+MVE
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G P+ V + ++++ L+ H EA ++ M+ + PD +Y + GLC+ G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 410 LKLHNQ-------------------ILKFDLIEDAFSL----------------NILLNY 434
L L N+ + K+ +DA +L + L++
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
+C MI R + P++ T + +ID K G KA +LY MIK PN
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 495 LTIYNSFINGLCKMASTDVAKNLVD-ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 553
+ Y+S ING C + AK +++ +RK L + T+NTLI+G+ + ++D+ L
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 554 EMKSLGLSANRVTYNTLIN-LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
EM GL N VTY TLI+ CD A+ + K M+ G+ P+ +TY L+ K
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDN-AQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 613 HHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ + + +Y+ + PD TY+ ++
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 181/365 (49%), Gaps = 4/365 (1%)
Query: 181 NNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLK 240
N+ L+ N I L M G+ + TF I+ L + EA+ +I RM++
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211
Query: 241 DGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG 300
G P++V++ +++G CK G DLAL ++ KM + N V Y+++I+ CK
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME---AAKIEANVVIYSTVIDSLCKYRH 268
Query: 301 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 360
A + +M G P+V TY++LI +G ++ RL +M+ER + PN+V +++
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 361 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 420
++ + G + +A K+ +MI + I P+ ++Y+ L G C L EA ++ +++ D
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 480
+ + + N L+N CK+ M RGL + T T+I G + + + A
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 481 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGY 539
++ M+ + PN+ YN ++GLCK A + + L++ + D T+N +I G
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Query: 540 SNSGQ 544
+G+
Sbjct: 509 CKAGK 513
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 154/312 (49%), Gaps = 1/312 (0%)
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
L++++ L M + FP+I+ ++ +L + + + M I + Y+Y I
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L CR L+ AL L +++K D +LN LLN C M+ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
PD T T+I G +A+ L + M++ QP+L Y + +NGLCK TD+A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 516 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
NL++++ K+ + ++T+I D+A L TEM++ G+ N +TY++LI+ L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C G +A L+ MI + I P+ +T++ LI F KK + L++ MI + + P+
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 635 KTYDAIVTPFLL 646
TY +++ F +
Sbjct: 359 FTYSSLINGFCM 370
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 203/401 (50%), Gaps = 3/401 (0%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
F L++ C + G E ++D++ EL G +V + + + +I++ L+ MG
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G V N T+ + I L K + + +M +DG FPN+ ++N +++ CK G
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A +V +M V N V+YN++I G C++ L A +V+ M G P++ TY
Sbjct: 286 DAFQVFDEMR---ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYN 342
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
TLIDG+ G L ++L LC ++ RGL P++V YN ++ R GD A+K++ +M ++
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
I P + +Y IL + R+ + +A++L + + L+ D + ++L++ C
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
SM+ + P+ T+I G CK G++ +AL+L M + + PN+ Y I
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 505 LCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQI 545
LCK + A+ LV+++ + +T+ +LIS N +
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHV 563
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 243/526 (46%), Gaps = 24/526 (4%)
Query: 93 HSSCTLLQVL---VNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALV 149
H+ LLQV+ ++S++FT + SL+ L E+ + +++ ++
Sbjct: 57 HAQSLLLQVISGKIHSQFFTSS-SLLHYLTE--------------SETSKTKFRLYEVII 101
Query: 150 RACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHV 209
+ Q + + E+ G + + +N L+ +V + +++W + S V
Sbjct: 102 NSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVV 160
Query: 210 ENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKV 269
+V +F + I C+ + ++ ++ + + G PNVV + +IDG CK G ++ A +
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDL 220
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
+M + + N +Y +ING K G E+ M + G P++ TY +++
Sbjct: 221 FFEMGKL---GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
+ G +++ ++ DEM ERG+ NIV YN+++ L R + EA+KV+ M I P+
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
+Y L +G C G L +AL L + L + NIL++ C+
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 450 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 509
M RG+ P T +ID + N EKA++L M ++ P++ Y+ I+G C
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 510 STDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 568
+ A L + ++ + +NT+I GY G A L EM+ L+ N +Y
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Query: 569 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
+I +LCK +EA+ L++ MI GI P + +LI+ H
Sbjct: 518 YMIEVLCKERKSKEAERLVEKMIDSGIDPS-TSILSLISRAKNDSH 562
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 191/397 (48%), Gaps = 39/397 (9%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+V SF ++I G C+ G ++ + ++ ++ T PN V Y ++I+G CKKG + A+
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIEL---TEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
++ +M K G + RTY LI+G + G ++ + ++M E G+FPN+ YN ++ L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ G ++A +V +M ++ + + +Y L GLCR L EA K+ +Q
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ---------- 328
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
M + G+ P++ T T+IDG C +G KAL L
Sbjct: 329 -------------------------MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQ 544
+ P+L YN ++G C+ T A +V E+ +R + + T+ LI ++ S
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
+++A L M+ LGL + TY+ LI+ C G EA L K M+ + P+ + Y T
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+I + K+ + L M K + P+ +Y ++
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 188/396 (47%), Gaps = 40/396 (10%)
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
+ +II+ ++ SL+L++ N M N P S +N ++ F
Sbjct: 97 YEVIINSYVQSQSLNLSISYF---NEMVDNGFVPGSNCFNYLLT-FVVGSSSFNQWWSFF 152
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
+ K+ V ++ LI G G +E+S L E+ E G PN+V+Y +++ + G
Sbjct: 153 NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
++E+A + +M + ++ +Y +L GL +NG + +++ +
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK-------------- 258
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
M G+ P++YT V++ CK G T+ A ++++ M +
Sbjct: 259 ---------------------MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA 548
N+ YN+ I GLC+ + A +VD+++ + + T+NTLI G+ G++ +A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
L ++KS GLS + VTYN L++ C+ G A +++K M +GI+P +TYT LI
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 609 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
F + + E+ I L M G++PD TY ++ F
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 205/409 (50%), Gaps = 9/409 (2%)
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
++N + L ++ +DR +++GM + + T+ + LCKE R+ EA+ ++ M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
+G P+ V +N++IDG CK G L K++ M L PN V+YN++I+G C K
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL---KGCVPNEVTYNTLIHGLCLK 305
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
G L A +L MV + P+ TY TLI+G + +++RL M ERG N +Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
+ ++ L++ G EEA + M +K P+ Y++L +GLCR G EA ++ N+++
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
+ +A++ + L+ K+ M G + + + +IDG C +G ++
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL----RKRKLLDATTFNT 534
A+ +++ M+ + +P+ Y+S I GLC + S D A L E+ + D T+N
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK--NGCDE 581
L+ G I A L M G + +T NT +N L + N CD+
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDK 594
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 208/427 (48%), Gaps = 8/427 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
F+ +++A ++ + A +V + R CL + + + L + ID L M
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
S G + +N+ I LCK+ + ++ M G PN V++N +I G C G LD
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A+ ++++ M + PN V+Y ++ING K+ A +L M + G+ + Y+
Sbjct: 310 KAVSLLER---MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
LI G + G EE++ L +M E+G PNIVVY+ ++ L R G EA ++L+ MI
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
P+ Y+Y+ L +G + G EA+++ ++ K + F ++L++ +C
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE---QPNLTIYNSF 501
M+T G+ PD +++I G C +G+ + AL+LY+ M+ +E QP++ YN
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 502 INGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYS-NSGQIDEAFGLTTEMKSLG 559
++GLC A +L++ + R D T NT ++ S S D+ E+
Sbjct: 547 LDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRL 606
Query: 560 LSANRVT 566
L RV+
Sbjct: 607 LKRQRVS 613
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 209/422 (49%), Gaps = 14/422 (3%)
Query: 230 EAITVIYRMLKDGTFP-NVVSFNMIIDGACKTGSLDLALK-----VMKKMNLMTGNSVWP 283
+A+ + +RM+ + +V SFN +++ G L+ V MN+ ++ P
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNM----NISP 185
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
N +S+N +I CK + A EV M + P TY TL+DG + ++E++ L
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
DEM G P+ V+YN ++ L + GD+ +K++ +M K P++ +Y L GLC
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
G L +A+ L +++ I + + L+N + K SM RG + +
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
+ +I G K G E+A+ L+ M + +PN+ +Y+ ++GLC+ + AK +++ +
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 524 RKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 582
L +A T+++L+ G+ +G +EA + EM G S N+ Y+ LI+ LC G +E
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK---GVIPDQKTYDA 639
A + M+ GI+PD + Y+++I + + L+ M+ + PD TY+
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 640 IV 641
++
Sbjct: 546 LL 547
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 186/393 (47%), Gaps = 7/393 (1%)
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
PN +SFN++I CK +D A++V + M P+ +Y ++++G CK+ + A
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGM---PERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
+L +M G PS Y LIDG + G L +L D M +G PN V YN++++
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
L G +++A +L M+ P+ +Y L GL + T+A++L + + + +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
++L++ + K M +G P++ + ++DG C+ G +A + N
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSG 543
MI PN Y+S + G K + A + E+ K + ++ LI G G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ---GIRPDCI 600
++ EA + ++M ++G+ + V Y+++I LC G + A +L M+ Q +PD +
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 601 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
TY L+ + + L + M+ +G PD
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 139/291 (47%), Gaps = 5/291 (1%)
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
V+ N LY H +E V++ ++ +I P+ S+ ++ + LC+ ++ A+++
Sbjct: 157 VIINEGLY----HRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRG 212
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+ + + D ++ L++ +CK M + G P +IDG CK G+
Sbjct: 213 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 272
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNT 534
+ +L + M PN YN+ I+GLC D A +L++ + K + + T+ T
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 594
LI+G + +A L + M+ G N+ Y+ LI+ L K G EEA L + M +G
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 595 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
+P+ + Y+ L+ ++ P E + + MI G +P+ TY +++ F
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 6/266 (2%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
+ LLE ++ + L+ + A ++ + RG ++ H ++ +S
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L + + L++ M G N+ +++ + LC+E + EA ++ RM+ G PN
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
+++ ++ G KTG + A++V K+M+ TG S N Y+ +I+G C G + A
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMD-KTGCS--RNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV---ERGLFPNIVVYNSILY 363
V M+ G +P Y+++I G GS++ +L+L EM+ E P++V YN +L
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLD 548
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPD 389
L D+ A +L+ M+D+ PD
Sbjct: 549 GLCMQKDISRAVDLLNSMLDRGCDPD 574
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 150/334 (44%), Gaps = 34/334 (10%)
Query: 97 TLLQVLVNSRWFTEALSLMRNL------------------IAKEGIA--PLELLEALMDE 136
TL+ LV R T+A+ L+ ++ + KEG A + L + ++
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391
Query: 137 SYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRF 196
+ V+ LV + G A +++ + GCL + + +++ + + +
Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Query: 197 WRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDG 256
+++K M G N +++ I LC RV EA+ V +ML G P+ V+++ II G
Sbjct: 452 VQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKG 511
Query: 257 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 316
C GS+D ALK+ +M P+ V+YN +++G C + + A ++L M+ G
Sbjct: 512 LCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGC 571
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
+P V T T ++ +L E CD+ R +VV L + + A
Sbjct: 572 DPDVITCNTFLN------TLSEKSNSCDK--GRSFLEELVVR------LLKRQRVSGACT 617
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
++ M+ K++ P ++A++ +C+ + A+
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 241/474 (50%), Gaps = 18/474 (3%)
Query: 172 GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGH------VENVNTFNLAIYALCKE 225
G S A++N + + + RF +L + F H + ++ F+ + A+ K
Sbjct: 35 GFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM 94
Query: 226 CRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNS 285
+ I + +M G N+ + N++++ C+ L LAL + KM + G+ P+
Sbjct: 95 KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM-IKLGHE--PSI 151
Query: 286 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
V++ S++NGFC+ + A + MV G++P+V Y T+IDG + ++ +L L +
Sbjct: 152 VTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
M + G+ P++V YNS++ L G +A++++S M + I PD +++ L + + G
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
++EA + + ++++ L D + ++L+ +C G M+++G PDV T +
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
+I+G CK E ++L+ M + N Y I G C+ +VA +E+ +R
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA----EEIFRRM 387
Query: 526 LL-----DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
+ + T+N L+ G ++G+I++A + +M+ G+ A+ VTYN +I +CK G
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
+A ++ + QG+ PD TYTT++ KK E AL M G++P++
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 211/413 (51%), Gaps = 4/413 (0%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
+++ + + M++ P++ F+ ++ K D+ + + ++M ++ + N + N
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML---GIPHNLCTCN 120
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
++N FC+ L LA LG M+K G EPS+ T+ +L++G+ R + ++L + D+MV
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G PN+V+YN+I+ L + ++ A +L+ M I PD +Y L GLC +G ++A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
++ + + K ++ D F+ N L++ K MI R L PD+ T + +I G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA 529
C ++A ++ M+ P++ Y+ ING CK + L E+ +R ++
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 530 T-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
T T+ LI GY +G+++ A + M G+ N +TYN L++ LC NG E+A ++
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
M G+ D +TY +I K + ++ + +G++PD TY ++
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 195/442 (44%), Gaps = 23/442 (5%)
Query: 56 PKLTTFMVNRVVSEFHNSPHLALDFYNWVGMLF---PHSLHSSCTLLQVLVNSRWFTEAL 112
P + F +R++S + Y W M PH+L + LL + AL
Sbjct: 79 PSIADF--SRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLAL 136
Query: 113 SLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRG 172
S + +I K G P + + + V+DAL VG G
Sbjct: 137 SFLGKMI-KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM--------------G 181
Query: 173 CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAI 232
+V +N + L + +D L M G +V T+N I LC R +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 233 TVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII 292
++ M K +P+V +FN +ID K G + A + ++M S+ P+ V+Y+ +I
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM---IRRSLDPDIVTYSLLI 298
Query: 293 NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 352
G C L AEE+ G MV G P V TY+ LI+GY + +E ++L EM +RG+
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 353 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 412
N V Y ++ R G + A ++ M+ + P+ +Y +L GLC NG + +AL +
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 413 HNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 472
+ K + D + NI++ +CK+ S+ +GL PD++T T++ G K
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Query: 473 LGNTEKALRLYNGMIKMDEQPN 494
G +A L+ M + PN
Sbjct: 479 KGLRREADALFRKMKEDGILPN 500
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 1/304 (0%)
Query: 342 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 401
+C R + N Y +L R ++++ + M+ P ++ L +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 402 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 461
+ + L Q+ + + + NILLN C+ G MI G P +
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
T ++++G C+ AL +++ M+ M +PN+ IYN+ I+GLCK D A +L++ +
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 522 RKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
K + D T+N+LISG +SG+ +A + + M + + T+N LI+ K G
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
EA+E + MI + + PD +TY+ LI +E + +M+ KG PD TY +
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 641 VTPF 644
+ +
Sbjct: 333 INGY 336
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 144/326 (44%), Gaps = 1/326 (0%)
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
Y ++ R+ L++SL L MV+ P+I ++ +L + + + + M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
I + + IL CR L+ AL +++K + LLN C+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M+ G P+V T+IDG CK + AL L N M K P++ YNS I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 503 NGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+GLC A +V + KR++ D TFN LI G++ EA EM L
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
+ VTY+ LI LC +EA+E+ M+ +G PD +TY+ LI + K E + L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 622 HDYMILKGVIPDQKTYDAIVTPFLLA 647
M +GV+ + TY ++ + A
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRA 374
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 140/487 (28%), Positives = 226/487 (46%), Gaps = 11/487 (2%)
Query: 163 DVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGS-FGHVENVNTFNLAIYA 221
DV+ LR ++ A ++ L E + + +Y + + V +V N +
Sbjct: 120 DVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSL 179
Query: 222 LCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSV 281
L K R+ +A V M G + S +++ G C G +++ K+++ G
Sbjct: 180 LVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGR---WGKGC 236
Query: 282 WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLR 341
PN V YN+II G+CK G + A V ++ GF P++ T+ T+I+G+ + G S R
Sbjct: 237 IPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDR 296
Query: 342 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 401
L E+ ERGL ++ N+I+ YRHG + ++ + +I PD +Y IL LC
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLC 356
Query: 402 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 461
+ G A+ ++ K LI + S L+ CKS M RG PD+
Sbjct: 357 KEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIV 416
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
T +I G G+ + A+ + +I P+ IYN ++GLCK AK L E+
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM 476
Query: 522 RKRKLL-DATTFNTLISGYSNSGQIDEA---FGLTTEMKSLGLSANRVTYNTLINLLCKN 577
R +L DA + TLI G+ SG DEA F L+ E G+ + V +N +I C++
Sbjct: 477 LDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK---GVKVDVVHHNAMIKGFCRS 533
Query: 578 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
G +EA M M + + PD TY+T+I + K+ I + YM P+ TY
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 638 DAIVTPF 644
+++ F
Sbjct: 594 TSLINGF 600
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/643 (22%), Positives = 269/643 (41%), Gaps = 108/643 (16%)
Query: 57 KLTTFMVNRVVSEFHNSPHL--ALDFYNWVGMLFPH--SLHSSCTLLQVLVNSRWFTEAL 112
KLT ++ V+ + S L A++ Y++V L+ + + +LL +LV SR +A
Sbjct: 131 KLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDAR 190
Query: 113 SLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRG 172
+ + + ++Y C LV+ G E +I +G
Sbjct: 191 KVYDEMCDRGDSV----------DNYSTC-----ILVKGMCNEGKVEVGRKLIEGRWGKG 235
Query: 173 CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEA- 231
C+ ++ +N + ++ DI+ + ++K + G + + TF I CKE V +
Sbjct: 236 CIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASD 295
Query: 232 ---------------------ITVIYR-------------MLKDGTFPNVVSFNMIIDGA 257
I YR ++ + P+V ++N++I+
Sbjct: 296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRL 355
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
CK G ++A+ + + + + PN++SY +I +CK +A ++L M + G +
Sbjct: 356 CKEGKKEVAVGFLDEA---SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
P + TY LI G G +++++ + ++++RG+ P+ +YN ++ L + G A +
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
S+M+D++I PD Y YA L +G R+G EA K+ + ++ + D N ++ C+
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
S M L PD +T +T+IDG K + A++++ M K +PN+
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVT 592
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLL------------------------------ 527
Y S ING C +A+ E++ R L+
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELM 652
Query: 528 -------DATTFNTLISGY--------------SNSGQIDEAFGLTTEMKSLGLSANRVT 566
+ TFN L+ G+ SN GQ MKS G S +
Sbjct: 653 MTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAA 712
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
YN+ + LC +G + A M+ +G PD +++ ++ F
Sbjct: 713 YNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 193/404 (47%), Gaps = 4/404 (0%)
Query: 243 TFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL 302
+ P+V++ N ++ K+ L A KV +M G+SV ++ S ++ G C +G +
Sbjct: 166 SVPDVIACNSLLSLLVKSRRLGDARKVYDEM-CDRGDSV--DNYSTCILVKGMCNEGKVE 222
Query: 303 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
+ +++ G P++ Y T+I GY + G +E + + E+ +G P + + +++
Sbjct: 223 VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMI 282
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
+ GD + ++LS++ ++ + + + + R+GY + + I+ D
Sbjct: 283 NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK 342
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
D + NIL+N +CK +GL P+ + A +I CK + A +L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSN 541
M + +P++ Y I+GL D A N+ +L R + DA +N L+SG
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
+G+ A L +EM + + Y TLI+ ++G +EA+++ + + +G++ D +
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 602 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
+ +I F + +E +A + M + ++PD+ TY I+ ++
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 162/378 (42%), Gaps = 37/378 (9%)
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE-RGLFPNIVVYNSILY 363
E+VLG++ + + + ++ YA GSL +++ + D +VE P+++ NS+L
Sbjct: 119 EDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLS 178
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
L + + +A KV +M D+ D YS IL +G+C G + KL I
Sbjct: 179 LLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIP 238
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN-------- 475
+ N ++ CK + +G P + T T+I+G CK G+
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 476 ---TEKALRL------------YNGMIKMDE------------QPNLTIYNSFINGLCKM 508
E+ LR+ Y K+D +P++ YN IN LCK
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 509 ASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
+VA +DE K+ L+ + ++ LI Y S + D A L +M G + VTY
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 627
LI+ L +G ++A + +I +G+ PD Y L++ K L M+
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 628 KGVIPDQKTYDAIVTPFL 645
+ ++PD Y ++ F+
Sbjct: 479 RNILPDAYVYATLIDGFI 496
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 188/458 (41%), Gaps = 56/458 (12%)
Query: 48 WSALEQLSPKLTTF--MVNRVVSEFHNSPHLALDFYNWVGM--LFPHSLHSSCTLLQVLV 103
W P + T+ ++NR+ E +A+ F + L P++L S L+Q
Sbjct: 335 WIIANDCKPDVATYNILINRLCKE--GKKEVAVGFLDEASKKGLIPNNL-SYAPLIQAYC 391
Query: 104 NSRWFTEALSLMRNLIAKEGIAP---------------------LELLEALMDESYQHCP 142
S+ + A L+ + A+ G P + + L+D
Sbjct: 392 KSKEYDIASKLLLQM-AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKG 202
A+++ L+ + G A + E+ R L + + + + D D +++
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
G +V N I C+ + EA+ + RM ++ P+ +++ IIDG K
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
+ A+K+ + M N PN V+Y S+INGFC +G +AEE +M P+V T
Sbjct: 571 MATAIKIFR---YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 323 YATLIDGYARWGS-LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
Y TLI A+ S LE+++ + M+ PN V +N +L + + + KVL++
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK----KTSGKVLAE- 682
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED-AFSLNILLNYICKSXX 440
PD ++ ++ +E +K D D A + N L +C
Sbjct: 683 ------PDGSNHG-------QSSLFSEFF----HRMKSDGWSDHAAAYNSALVCLCVHGM 725
Query: 441 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
M+ +G PD + A ++ G C +GN+++
Sbjct: 726 VKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 158/388 (40%), Gaps = 18/388 (4%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
+ L++A + + A ++ ++ RGC + + + LV +D + +
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G + +N+ + LCK R + A + ML P+ + +IDG ++G D
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A KV +L V + V +N++I GFC+ G L A + M + P TY+
Sbjct: 503 EARKVF---SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
T+IDGY + + ++++ M + PN+V Y S++ GD + A + +M +
Sbjct: 560 TIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLR 619
Query: 385 HICPDQYSYAILTEGLCR-NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ P+ +Y L L + + L +A+ ++ + + + N LL K
Sbjct: 620 DLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKV 679
Query: 444 XXXXXGS--------------MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
GS M + G + + C G + A + M+K
Sbjct: 680 LAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKK 739
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNL 517
P+ + + ++G C + ++ +N+
Sbjct: 740 GFSPDPVSFAAILHGFCVVGNSKQWRNM 767
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 216/438 (49%), Gaps = 4/438 (0%)
Query: 159 EGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLA 218
E A+ + E+ L S+ + L+ + + + M +G ++ +F +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTG 278
I+ C+ R+ A++V+ +M+K G P++V+F ++ G C + A ++ LM
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI---LMVK 169
Query: 279 NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
+ PN V YN++I+G CK G L +A E+L +M K G V TY TL+ G G +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 339 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
+ R+ +M++R + P++V + +++ + G+++EA ++ +MI + P+ +Y +
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 399 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
GLC +G L +A K + + + + N L++ CK M G
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
D++T T+I G C++G AL ++ M+ P++ + ++GLC + A
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 519 DELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 577
D++R+ K + +N +I G + ++++A+ L + G+ + TY +I LCKN
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 578 GCDEEAKELMKMMIMQGI 595
G EA EL++ M +GI
Sbjct: 470 GPRREADELIRRMKEEGI 487
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 207/410 (50%), Gaps = 7/410 (1%)
Query: 233 TVIY---RMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
TVIY +M G ++ SF ++I C+ L AL V+ KM + P+ V++
Sbjct: 89 TVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL---GYEPSIVTFG 145
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
S+++GFC + A ++ MVK+G+EP+V Y TLIDG + G L +L L +EM ++
Sbjct: 146 SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
GL ++V YN++L L G +A+++L DM+ + I PD ++ L + + G L EA
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
+L+ ++++ + + + N ++N +C M ++G P+V T T+I G
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-D 528
CK ++ ++L+ M ++ YN+ I+G C++ VA ++ + R++ D
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
T L+ G +G+I+ A +M+ V YN +I+ LCK E+A EL
Sbjct: 386 IITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFC 445
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 638
+ ++G++PD TYT +I K E L M +G+I D
Sbjct: 446 RLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAED 495
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 198/451 (43%), Gaps = 74/451 (16%)
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
R +A + + M+ P++V F ++ + + +KM L + +
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY---GISHDLY 107
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
S+ +I+ FC+ L A VLG M+K G+EPS+ T+ +L+ G+ + ++ L M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
V+ G PN+VVYN+++ L ++G++ A ++L++M K + D +Y L GLC +G
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
++A ++ ++K R + PDV T +
Sbjct: 228 SDAARMLRDMMK-----------------------------------RSINPDVVTFTAL 252
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
ID K GN ++A LY MI+ PN YNS INGLC AK D + +
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 527 L-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
+ T+NTLISG+ +DE L M G +A+ TYNTLI+ C+ G A +
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 586 LMKMMIMQGIRPDCITYTTL-------------ITHFNKKHHPEEVIALHDYMIL----- 627
+ M+ + + PD IT+ L + F+ E+ I + Y I+
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Query: 628 -----------------KGVIPDQKTYDAIV 641
+GV PD +TY ++
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 171/360 (47%), Gaps = 3/360 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
L +L +M Y+ F +L+ V A+ ++ + G +V +N +
Sbjct: 126 LSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDG 185
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L + +++ L M G +V T+N + LC R +A ++ M+K P+
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
VV+F +ID K G+LD A ++ K+ M +SV PN+V+YNSIING C G L A++
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKE---MIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
M G P+V TY TLI G+ ++ ++E ++L M G +I YN++++
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ G + A + M+ + + PD ++ IL GLC NG + AL + + + +
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ NI+++ +CK+ + G+ PD T +I G CK G +A L M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 174/383 (45%), Gaps = 3/383 (0%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
F L+ + A V+ ++ G S+ + + L VN I + L M
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G+ NV +N I LCK + A+ ++ M K G +VV++N ++ G C +G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A ++++ M S+ P+ V++ ++I+ F K+G L A+E+ +M+++ +P+ TY
Sbjct: 229 DAARMLRD---MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
++I+G G L ++ + D M +G FPN+V YN+++ + ++E K+ M +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
D ++Y L G C+ G L AL + ++ + D + ILL+ +C +
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
M + +I G CK EKA L+ + +P+ Y I G
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 505 LCKMASTDVAKNLVDELRKRKLL 527
LCK A L+ +++ ++
Sbjct: 466 LCKNGPRREADELIRRMKEEGII 488
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 224/453 (49%), Gaps = 19/453 (4%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV--EVNDIDRFWRLYKG 202
F L+ A ++G E A + ++ C V +N L ++ EV + F +Y
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAF-AVYNE 188
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M N+ TF + + L K+ R +A + M G PN V++ ++I G C+ GS
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
D A K+ +M +GN +P+SV++N++++GFCK G ++ A E+L K GF +R
Sbjct: 249 ADDARKLFYEMQ-TSGN--YPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
Y++LIDG R ++ L M+++ + P+I++Y ++ L + G +E+A K+LS M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
K I PD Y Y + + LC G L E L ++ + + DA + IL+ +C++
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM---------IKMDEQP 493
+ G P V T +IDG CK G ++A L + M +++
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 553
N + +G A D+A + D D ++N LI+G+ +G ID A L
Sbjct: 486 NRSFDTMVESGSILKAYRDLA-HFADTGSSP---DIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
++ GLS + VTYNTLIN L + G +EEA +L
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 208/466 (44%), Gaps = 19/466 (4%)
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L E N D +W+ + + S G + F + I A K +A+ RM + P+
Sbjct: 102 LSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPD 161
Query: 247 VVSFNMIIDGACKTGSL-DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
V ++N+I+ + LA V N M + PN ++ +++G KKG A+
Sbjct: 162 VFTYNVILRVMMREEVFFMLAFAVY---NEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQ 218
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
++ DM G P+ TY LI G + GS +++ +L EM G +P+ V +N++L
Sbjct: 219 KMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGF 278
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ G M EA ++L Y+ L +GL R T+A +L+ +LK ++ D
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
IL+ + K+ SM ++G+ PD Y VI C G E+ L
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQ 544
M + + P+ + I +C+ A+ + E+ K + TFN LI G SG+
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 545 IDEAFGLTTEMK---------SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 595
+ EA L +M+ L S NR +++T++ ++G +A + G
Sbjct: 459 LKEARLLLHKMEVGRPASLFLRLSHSGNR-SFDTMV----ESGSILKAYRDLAHFADTGS 513
Query: 596 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
PD ++Y LI F + + + L + + LKG+ PD TY+ ++
Sbjct: 514 SPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 156/360 (43%), Gaps = 10/360 (2%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
+ +I+ + G L + L ++ G + LI YA+ G E+++ M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEE-----ASKVLSDMIDKHICPDQYSYAILTEGLCR 402
E P++ YN IL + R EE A V ++M+ + P+ Y++ IL +GL +
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 403 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 462
G ++A K+ + + + + + IL++ +C+ M T G PD
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
++DG CKLG +A L K L Y+S I+GL + A L +
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 523 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
K+ + D + LI G S +G+I++A L + M S G+S + YN +I LC G E
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 582 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
E + L M PD T+T LI + E + + G P T++A++
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 192/464 (41%), Gaps = 57/464 (12%)
Query: 88 FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDA 147
F L +L+ L +R +T+A L N++ K+ I P +L +
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANML-KKNIKPDIIL--------------YTI 343
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
L++ ++ G E A ++ + ++G + +N + L ++ L M
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
+ T + I ++C+ V EA + + K G P+V +FN +IDG CK+G L A
Sbjct: 404 SFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEAR 463
Query: 268 KVMKKMNLMTGNSVWPN-SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
++ KM + S++ S S N + + G +L A L G P + +Y L
Sbjct: 464 LLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVL 523
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
I+G+ R G ++ +L+L + + +GL P+ V YN+++ L+R G EEA K+ D
Sbjct: 524 INGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH 583
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQIL-KFDLIEDAFSLNILLNYICKSXXXXXXX 445
P Y +++T CR + A L + L K ++D
Sbjct: 584 SPAVYR-SLMTWS-CRKRKVLVAFNLWMKYLKKISCLDD--------------------- 620
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 505
A I+ K G TE+ALR + ++ L Y ++ GL
Sbjct: 621 ----------------ETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGL 664
Query: 506 CKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 548
C+ A + LR++K+L + LI G Q+D A
Sbjct: 665 CQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAA 708
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/552 (26%), Positives = 255/552 (46%), Gaps = 14/552 (2%)
Query: 90 HSLHSSCTLLQVLVNSRWFTEALSLMRNLIA--KEGIAPL----ELLEALMD-ESYQHCP 142
+ L S ++ VL + +T A L+++LI K P L AL D +S +
Sbjct: 73 NDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSI 132
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKG 202
VF L+ ++G E A V E++ C A + L+ LV D W Y+
Sbjct: 133 GVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQL 189
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M S G V +V+ + + K+ + ++ M G PNV + + I C+
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
++ A K+ + LM + V PN +Y+++I+G+CK G + A + +++ A P+V
Sbjct: 250 MEEAEKMFE---LMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
+ TL+DG+ + L + L MV+ G+ PN+ VYN +++ + G+M EA +LS+M
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
++ PD ++Y IL GLC + EA +L ++ + + + N L++ CK
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M G+ P++ T +T+IDG C + + + A+ LY M P++ Y + I
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 503 NGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+ K A+ A L ++ + + + TF L+ G+ G++ A E
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSC 546
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
N V + LI LC+NG A M GI PD +Y +++ ++ + + L
Sbjct: 547 WNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMML 606
Query: 622 HDYMILKGVIPD 633
MI G++P+
Sbjct: 607 QCDMIKTGILPN 618
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 205/416 (49%), Gaps = 15/416 (3%)
Query: 235 IYRMLKDGTFP--NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII 292
++ L+D P ++ F+++I + G + AL V ++M P+S + SI+
Sbjct: 118 LFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK------CSPDSKACLSIL 171
Query: 293 NGFCKKGGLLLAEEVLGD---MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
NG ++ + V D M+ G P V Y L + G + +L DEM
Sbjct: 172 NGLVRRRRF---DSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G+ PN+ +Y + L R MEEA K+ M + P+ Y+Y+ + +G C+ G + +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
L+ +IL +L+ + L++ CK+ M+ G+ P++Y +I G
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA 529
+CK GN +A+ L + M ++ P++ Y INGLC A L +++ ++ +
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408
Query: 530 T-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
+ T+N+LI GY +++A L +EM + G+ N +T++TLI+ C + A L
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYF 468
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
M ++GI PD +TYT LI K+ + +E + L+ M+ G+ P+ T+ +V F
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 177/353 (50%), Gaps = 3/353 (0%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
+ A++ + G AY + E+ L +V + + + ++ L+ M
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
FG N+ +N I+ CK ++EA+ ++ M P+V ++ ++I+G C +
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A ++ +KM ++P+S +YNS+I+G+CK+ + A ++ +M +G EP++ T++
Sbjct: 392 EANRLFQKMK---NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
TLIDGY ++ ++ L EM +G+ P++V Y +++ ++ +M+EA ++ SDM++
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
I P+ +++A L +G + G L+ A+ + + + + L+ +C++
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
M + G+ PD+ + +++ G+ + + L MIK PNL +
Sbjct: 569 SRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 142/292 (48%), Gaps = 8/292 (2%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
V++ L+ + G A ++ E+ + V + ++ L + + RL++ M
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
+ + T+N I+ CKE + +A+ + M G PN+++F+ +IDG C +
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
A+ + +M + + P+ V+Y ++I+ K+ + A + DM++AG P+ T+
Sbjct: 461 KAAMGLYFEMTI---KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
A L+DG+ + G L ++ E ++ N V + ++ L ++G + AS+ SDM
Sbjct: 518 ACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRS 577
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
I PD SY + +G + +T+ + +L+ D+I+ N+L+N +
Sbjct: 578 CGITPDICSYVSMLKGHLQEKRITDTM-----MLQCDMIKTGILPNLLVNQL 624
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 4/239 (1%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
L + + +E A +++L+ + E A D+ E+ G ++ ++ +
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
V DI LY M G V +V T+ I A KE + EA+ + ML+ G PN
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
+F ++DG K G L +A+ ++ N S W N V + +I G C+ G +L A
Sbjct: 516 TFACLVDGFWKEGRLSVAIDFYQENN--QQRSCW-NHVGFTCLIEGLCQNGYILRASRFF 572
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
DM G P + +Y +++ G+ + + +++ L +M++ G+ PN++V N +L Y+
Sbjct: 573 SDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV-NQLLARFYQ 630
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 138/544 (25%), Positives = 247/544 (45%), Gaps = 14/544 (2%)
Query: 102 LVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPA----VFDALVRACTQVGA 157
LV R F + ++ + +E+ L+ PA F L+ + G
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 158 TEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
+ A+D+ + RG + A++ + + + +L+ G +V F+
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
I K + A V RML G PNVV++ ++I G C+ G + A + ++
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI---L 418
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
+ P+ V+Y+S+I+GFCK G L + DM+K G+ P V Y L+DG ++ G +
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY---- 393
++R +M+ + + N+VV+NS++ R +EA KV M I PD ++
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 394 --AILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
+I+ + C++ T L+L + + + + D N++++ + K ++
Sbjct: 539 RVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 598
Query: 452 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 511
I + PD+ T T+I G C L ++A R++ + PN I+ LCK
Sbjct: 599 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 658
Query: 512 DVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 570
D A + + K +A T+ L+ +S S I+ +F L EM+ G+S + V+Y+ +
Sbjct: 659 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 718
Query: 571 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 630
I+ LCK G +EA + I + PD + Y LI + K E L+++M+ GV
Sbjct: 719 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778
Query: 631 IPDQ 634
PD
Sbjct: 779 KPDD 782
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 151/656 (23%), Positives = 276/656 (42%), Gaps = 87/656 (13%)
Query: 64 NRVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEG 123
N V+ + P+ AL ++ W + S T+ VL+ + F A + +I G
Sbjct: 73 NLVLLSLESEPNSALKYFRWAEI--SGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRG 130
Query: 124 IAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNF 183
+L ++ D S F L+ C + G + A ++ G ++ +
Sbjct: 131 -KDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRM 187
Query: 184 LSHLVEVNDIDRFWRLYKGMGSFG-HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDG 242
L+ L+ + +D + + G V+ + AL + V +A+ +++ G
Sbjct: 188 LNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERG 247
Query: 243 TFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL 302
+VS N ++ G S+D + ++L+ PN V++ ++INGFCK+G +
Sbjct: 248 FRVGIVSCNKVLKGL----SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 303 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
A ++ M + G EP + Y+TLIDGY + G L +L + + +G+ ++VV++S +
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
+ GD+ AS V M+ + I P+ +Y IL +GLC++G + EA ++ QILK +
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA------------------ 464
+ + L++ CK MI G PPDV
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 465 -----------------TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI----- 502
++IDG C+L ++AL+++ M +P++ + + +
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 503 -NGLCKMASTDVAKNLVDELRKRKLL---------------------------------- 527
+ CK + L D +++ K+
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603
Query: 528 --DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
D T+NT+I GY + ++DEA + +K N VT LI++LCKN + A
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ +M +G +P+ +TY L+ F+K E L + M KG+ P +Y I+
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 204/465 (43%), Gaps = 39/465 (8%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
+ L+ + G + + + +G + V +++ + V+ D+ +YK M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL- 263
G NV T+ + I LC++ R+ EA + ++LK G P++V+++ +IDG CK G+L
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 264 -------------------------------DLALKVMKKMNLMTGNSVWPNSVSYNSII 292
L L M+ M G S+ N V +NS+I
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 293 NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI------DGYARWGSLEESLRLCDEM 346
+G+C+ A +V M G +P V T+ T++ D + + L+L D M
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
+ +I V N +++ L++ +E+ASK +++I+ + PD +Y + G C L
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
EA ++ + + +L IL++ +CK+ M +G P+ T +
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
+D K + E + +L+ M + P++ Y+ I+GLCK D A N+ + KL
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 743
Query: 527 L-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 570
L D + LI GY G++ EA L M G+ + + L
Sbjct: 744 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 49/345 (14%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
L E ++ Y ++ LV ++ G A ++ + ++V +N+ +
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY------ALCK------------------ 224
+N D ++++ MG +G +V TF + A CK
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567
Query: 225 ----------------ECRVVEAITVIYRMLKDGTF-PNVVSFNMIIDGACKTGSLDLAL 267
+C +E + + L +G P++V++N +I G C LD A
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
++ + L+ PN+V+ +I+ CK + A + M + G +P+ TY L+
Sbjct: 628 RIFE---LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
D +++ +E S +L +EM E+G+ P+IV Y+ I+ L + G ++EA+ + ID +
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 744
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKF-----DLIEDAFS 427
PD +YAIL G C+ G L EA L+ +L+ DL++ A S
Sbjct: 745 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALS 789
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 2/195 (1%)
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
++ RG + + V+ G + E A RL + ++ PN+ + + ING CK
Sbjct: 243 VMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 511 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
D A +L + +R + D ++TLI GY +G + L ++ G+ + V +++
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
I++ K+G A + K M+ QGI P+ +TYT LI + E ++ ++ +G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 630 VIPDQKTYDAIVTPF 644
+ P TY +++ F
Sbjct: 422 MEPSIVTYSSLIDGF 436
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF-PNVVSFNMIIDGACKTGSLDLALKV 269
++ T+N I C R+ EA I+ +LK F PN V+ ++I CK +D A+++
Sbjct: 606 DIVTYNTMICGYCSLRRLDEA-ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
++M PN+V+Y +++ F K + + ++ +M + G PS+ +Y+ +IDG
Sbjct: 665 F---SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 721
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
+ G ++E+ + + ++ L P++V Y ++ + G + EA+ + M+ + PD
Sbjct: 722 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Query: 390 QYSYAILTE 398
L+E
Sbjct: 782 DLLQRALSE 790
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 210/428 (49%), Gaps = 12/428 (2%)
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTG 278
+ A K R+ + + RM+ G V S ++++G C+ G ++ + K++K+ ++
Sbjct: 196 LVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSV--- 252
Query: 279 NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
+ P + +YN+IIN + K+ E VL M K G + TY L++ + G + +
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD 312
Query: 339 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
+ +L DEM ERG+ ++ VY S++ W R G+M+ A + ++ +K + P Y+Y L +
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 399 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
G+C+ G + A L N++ + N L++ C+ M +G
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 459 DVYTKATVIDGNCKLGNTEKA----LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
DV+T T+ +L ++A R+ G +K+ + Y + I+ CK + + A
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL----STVSYTNLIDVYCKEGNVEEA 488
Query: 515 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
K L E+ + + +A T+N +I Y G+I EA L M++ G+ + TY +LI+
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
C +EA L M ++G+ + +TYT +I+ +K +E L+D M KG D
Sbjct: 549 ECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Query: 634 QKTYDAIV 641
K Y A++
Sbjct: 609 NKVYTALI 616
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 185/411 (45%), Gaps = 4/411 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
LE+ ++D + +V + G E + +I E +G + +N ++
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
V+ D + K M G V N T+ L + K ++ +A + M + G +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
V + +I C+ G++ A + ++ T + P+S +Y ++I+G CK G + AE
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDEL---TEKGLSPSSYTYGALIDGVCKVGEMGAAEI 385
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
++ +M G + + TLIDGY R G ++E+ + D M ++G ++ N+I
Sbjct: 386 LMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFN 445
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
R +EA + L M++ + SY L + C+ G + EA +L ++ + +A
Sbjct: 446 RLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAI 505
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ N+++ CK +M G+ PD YT ++I G C N ++A+RL++ M
Sbjct: 506 TYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM 565
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLI 536
N Y I+GL K +D A L DE+ RK +D + LI
Sbjct: 566 GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 161/367 (43%), Gaps = 36/367 (9%)
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
MVK G R+ + + ++ L + MV+ G+ + ++ L R G+
Sbjct: 180 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGE 239
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
+E++ K++ + K I P+ Y+Y + + + + + K ++ + + +
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
L+ K+ M RG+ DV+ ++I NC+ GN ++A L++ + +
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 549
P+ Y + I+G+CK+ A+ L++E++ + + + FNTLI GY G +DEA
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 550 GLTTEMKSLGLSA------------NR-----------------------VTYNTLINLL 574
+ M+ G A NR V+Y LI++
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
CK G EEAK L M +G++P+ ITY +I + K+ +E L M G+ PD
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDS 539
Query: 635 KTYDAIV 641
TY +++
Sbjct: 540 YTYTSLI 546
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 143/308 (46%), Gaps = 3/308 (0%)
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
+L+ M G +V+ + I C++ + A + + + G P+ ++ +IDG
Sbjct: 315 KLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
CK G + A +M N M V V +N++I+G+C+KG + A + M + GF+
Sbjct: 375 CKVGEMGAAEILM---NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
V T T+ + R +E+ + M+E G+ + V Y +++ + G++EEA ++
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
+M K + P+ +Y ++ C+ G + EA KL + + D+++ L++ C
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
+ M +GL + T +I G K G +++A LY+ M + + +
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Query: 498 YNSFINGL 505
Y + I +
Sbjct: 612 YTALIGSM 619
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 137/321 (42%), Gaps = 46/321 (14%)
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
Y G EE LR+ D MV++GL + L + ++ ++ M+D +
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
YS I+ EGLCR G + ++ KL + FS+
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKE----------FSV--------------------- 252
Query: 450 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL---- 505
+G+ P+ YT T+I+ K ++ G++K+ ++ + +YN L
Sbjct: 253 ----KGIKPEAYTYNTIINAYVK----QRDFSGVEGVLKVMKKDGV-VYNKVTYTLLMEL 303
Query: 506 -CKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
K A+ L DE+R+R + D + +LIS G + AF L E+ GLS +
Sbjct: 304 SVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS 363
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 623
TY LI+ +CK G A+ LM M +G+ + + TLI + +K +E ++D
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 624 YMILKGVIPDQKTYDAIVTPF 644
M KG D T + I + F
Sbjct: 424 VMEQKGFQADVFTCNTIASCF 444
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 204/426 (47%), Gaps = 4/426 (0%)
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
L S+ + LS + ++N D L++ M G + T N+ ++ +C + A
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
+ +M+K G P++V+F +++G C ++ A+ + + + G PN V+Y ++I
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQ---ILGMGFKPNVVTYTTLIR 196
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
CK L A E+ M G P+V TY L+ G G ++ L +M++R + P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
N++ + +++ + G + EA ++ + MI + PD ++Y L GLC G L EA ++
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
+ + + L++ CKS M +G+ + T +I G C +
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTF 532
G + A ++N M P++ YN ++GLC + A + + +RKR++ ++ T+
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
+I G G++++AF L + S G+ N +TY T+I+ C+ G EA L K M
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 593 QGIRPD 598
G P+
Sbjct: 497 DGFLPN 502
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 207/444 (46%), Gaps = 39/444 (8%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
+A+ + RM+ P+++ F ++ K D+ + + ++M ++ + P + N
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL---GIPPLLCTCN 122
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
+++ C A LG M+K GFEP + T+ +L++GY W +E+++ L D+++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 350 G--------------------------LF---------PNIVVYNSILYWLYRHGDMEEA 374
G LF PN+V YN+++ L G +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
+ +L DM+ + I P+ ++ L + + G L EA +L+N +++ + D F+ L+N
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
+C M G P+ T+I G CK E ++++ M + N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTT 553
Y I G C + DVA+ + +++ R+ D T+N L+ G +G++++A +
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
M+ + N VTY +I +CK G E+A +L + +G++P+ ITYTT+I+ F ++
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 614 HPEEVIALHDYMILKGVIPDQKTY 637
E +L M G +P++ Y
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 180/366 (49%), Gaps = 4/366 (1%)
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M G ++ TF + C R+ +AI + ++L G PNVV++ +I CK
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
L+ A+++ N M N PN V+YN+++ G C+ G A +L DM+K EP+V T
Sbjct: 204 LNHAVELF---NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
+ LID + + G L E+ L + M++ ++P++ Y S++ L +G ++EA ++ M
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
P++ Y L G C++ + + +K+ ++ + ++ + + +L+ C
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M +R PPD+ T ++DG C G EKAL ++ M K + N+ Y I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440
Query: 503 NGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
G+CK+ + A +L L + + + T+ T+ISG+ G I EA L +MK G
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 562 ANRVTY 567
N Y
Sbjct: 501 PNESVY 506
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 161/325 (49%), Gaps = 12/325 (3%)
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
L+ N L+H VE L+ MG+ G NV T+N + LC+ R +A
Sbjct: 194 LIRCLCKNRHLNHAVE---------LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
++ M+K PNV++F +ID K G L ++ + N+M SV+P+ +Y S+IN
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKL---MEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
G C G L A ++ M + G P+ Y TLI G+ + +E+ +++ EM ++G+
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
N + Y ++ G + A +V + M + PD +Y +L +GLC NG + +AL +
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
+ K ++ + + I++ +CK S+ ++G+ P+V T T+I G C+
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIY 498
G +A L+ M + PN ++Y
Sbjct: 482 GLIHEADSLFKKMKEDGFLPNESVY 506
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 36/345 (10%)
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A ++ MV + PS+ + L+ A+ + + L ++M G+ P + N +++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
+ AS L M+ PD ++ L G C + +A+ L +QIL
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM---- 182
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
G P+V T T+I CK + A+ L+
Sbjct: 183 -------------------------------GFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMAS-TDVAKNLVDELRKRKLLDATTFNTLISGYSNS 542
N M +PN+ YN+ + GLC++ D A L D +++R + TF LI +
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
G++ EA L M + + + TY +LIN LC G +EA+++ +M G P+ + Y
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
TTLI F K E+ + + M KGV+ + TY ++ + L
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 140/335 (41%), Gaps = 25/335 (7%)
Query: 80 FYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAP------------- 126
F +GM F ++ + TL++ L +R A+ L N + G P
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF-NQMGTNGSRPNVVTYNALVTGLC 234
Query: 127 --------LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVH 178
LL +M + F AL+ A +VG A ++ + V
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
+ + ++ L +D +++ M G N + I+ CK RV + + + Y M
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
+ G N +++ ++I G C G D+A +V N M+ P+ +YN +++G C
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEV---FNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
G + A + M K + ++ TY +I G + G +E++ L + +G+ PN++ Y
Sbjct: 412 GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITY 471
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 393
+++ R G + EA + M + P++ Y
Sbjct: 472 TTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 2/248 (0%)
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
IL GL N +AL L +++ + LL+ I K M
Sbjct: 54 ILRNGL-HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G+PP + T V+ C +A M+K+ +P+L + S +NG C + A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 515 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
L D++ + T+ TLI + ++ A L +M + G N VTYN L+
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
LC+ G +A L++ M+ + I P+ IT+T LI F K E L++ MI V PD
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 634 QKTYDAIV 641
TY +++
Sbjct: 293 VFTYGSLI 300
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/579 (23%), Positives = 266/579 (45%), Gaps = 18/579 (3%)
Query: 59 TTFMVNRVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNL 118
T F+++ V + ++P +L FY WV P +++ L+ ++ + F + L+
Sbjct: 76 TRFVIS--VLQNQDNPLHSLRFYLWVSNFDP--VYAKDQSLKSVLGNALFRKGPLLL--- 128
Query: 119 IAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVH 178
+ELL+ + D Y+ + L+ + ++G + DV ++ G S
Sbjct: 129 -------SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTR 181
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
+N + LV+ N +D + ++ M S G + T+N+ I+ +CK+ V EAI ++ +M
Sbjct: 182 LYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM 241
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
++G PNV ++ ++IDG G +D ALK ++ M + N PN + + ++G +
Sbjct: 242 EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLN---PNEATIRTFVHGIFRC 298
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
A EVL ++ Y ++ + +E+ + ++ ERG P+ +
Sbjct: 299 LPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTF 358
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
N+ + L + D+ E ++ + + + P Y +L + L +E + Q+
Sbjct: 359 NAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGV 418
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
L+ +S N +++ +CK+ M RG+ P++ T T + G G+ +K
Sbjct: 419 DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKK 478
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLIS 537
+ ++ +P++ ++ IN LC+ A + E+ + + + T+N LI
Sbjct: 479 VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIR 538
Query: 538 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 597
++G D + L +MK GLS + YN I CK ++A+EL+K M+ G++P
Sbjct: 539 SCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP 598
Query: 598 DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
D TY+TLI ++ E + + G +PD T
Sbjct: 599 DNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 181/404 (44%), Gaps = 4/404 (0%)
Query: 242 GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 301
G P+ +N +ID K+ SLDLA K M + P+ +YN +I+G CKKG +
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLA---YLKFQQMRSDGCKPDRFTYNILIHGVCKKGVV 231
Query: 302 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 361
A ++ M + G P+V TY LIDG+ G ++E+L+ + M R L PN +
Sbjct: 232 DEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTF 291
Query: 362 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
++ ++R +A +VL ++K + Y + L N E + +I +
Sbjct: 292 VHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGY 351
Query: 422 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 481
I D+ + N ++ + K ++RG+ P ++ + R
Sbjct: 352 IPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDR 411
Query: 482 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYS 540
M ++ YN+ I+ LCK + A + E++ R + + TFNT +SGYS
Sbjct: 412 YLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYS 471
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 600
G + + G+ ++ G + +T++ +IN LC+ ++A + K M+ GI P+ I
Sbjct: 472 VRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEI 531
Query: 601 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
TY LI + + L M G+ PD Y+A + F
Sbjct: 532 TYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 157/340 (46%), Gaps = 3/340 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
E+L M++ +DA++ + + + ++ RG + +N +S
Sbjct: 305 FEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSC 364
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L++ +D+ R++ G S G N + + + AL R E + +M DG +
Sbjct: 365 LLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSS 424
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
V S+N +ID CK ++ A + +M + PN V++N+ ++G+ +G +
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQ---DRGISPNLVTFNTFLSGYSVRGDVKKVHG 481
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
VL ++ GF+P V T++ +I+ R ++++ EM+E G+ PN + YN ++
Sbjct: 482 VLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCC 541
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
GD + + K+ + M + + PD Y+Y + C+ + +A +L +L+ L D F
Sbjct: 542 STGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
+ + L+ + +S S+ G PD YTK V
Sbjct: 602 TYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 5/228 (2%)
Query: 172 GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEA 231
G L SV+++N + L + I+ M G N+ TFN + V +
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSI 291
V+ ++L G P+V++F++II+ C+ + A K+M L G + PN ++YN +
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEM-LEWG--IEPNEITYNIL 536
Query: 292 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
I C G + ++ M + G P + Y I + + ++++ L M+ GL
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTE 398
P+ Y++++ L G EA ++ S I++H C PD Y+ ++ E
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREMFSS-IERHGCVPDSYTKRLVEE 643
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 1/220 (0%)
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
N +++ + KS M + G PD +T +I G CK G ++A+RL M +
Sbjct: 184 NAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQ 243
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 547
+PN+ Y I+G D A ++ +R RKL + T T + G +
Sbjct: 244 EGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCK 303
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
AF + + RV Y+ ++ L N +E + ++ + +G PD T+ ++
Sbjct: 304 AFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMS 363
Query: 608 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
K H E + D + +GV P Y +V L A
Sbjct: 364 CLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNA 403
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 254/507 (50%), Gaps = 19/507 (3%)
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDI--DRFWRLY 200
++F L R GA + + T G + WN+ + H VN + D+ +Y
Sbjct: 59 SLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLI-HQFNVNGLVHDQVSLIY 117
Query: 201 KGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIY-RMLKDGTFPNVVSFNMIIDGACK 259
M + G +V N+ I++ CK R+ AI+++ R++ T V++N +I G C+
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDT----VTYNTVISGLCE 173
Query: 260 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 319
G D A + + +M M + P++VSYN++I+GFCK G + A+ ++ ++ E +
Sbjct: 174 HGLADEAYQFLSEMVKM---GILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----ELN 226
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
+ T+ L+ Y ++EE+ R +MV G P++V ++SI+ L + G + E +L
Sbjct: 227 LITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
+M + + P+ +Y L + L + AL L++Q++ + D +L++ + K+
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
++ P+V T ++DG CK G+ A + M++ PN+ Y+
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Query: 500 SFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
S ING K + A +L+ ++ + ++ + T+ T+I G +G+ + A L+ EM+ +
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 463
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
G+ N + L+N L + G +E K L+K M+ +G+ D I YT+LI F K E
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 523
Query: 619 IALHDYMILKGVIPDQKTYDAIVTPFL 645
+A + M +G+ D +Y+ +++ L
Sbjct: 524 LAWAEEMQERGMPWDVVSYNVLISGML 550
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 136/552 (24%), Positives = 248/552 (44%), Gaps = 40/552 (7%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
LL + + S + LV + + A + ++ RG V + + + L
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ D+ + +K + V NV T+ + LCK + A +I +ML+ PNVV
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
+++ +I+G K G L+ A+ +++KM +V PN +Y ++I+G K G +A E+
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKME---DQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
+M G E + L++ R G ++E L +MV +G+ + + Y S++ ++
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
GD E A +M ++ + D SY +L G+ + G + A + + + + D +
Sbjct: 518 GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATF 576
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
NI++N K M + G+ P + + V+ C+ G E+A+ + N M+
Sbjct: 577 NIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Query: 489 MDEQPNLT-----------------------------------IYNSFINGLCKMASTDV 513
M+ PNLT +YN+ I LCK+ T
Sbjct: 637 MEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKK 696
Query: 514 AKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
A ++ ++ R + D TFN+L+ GY + +A + M G+S N TYNT+I
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756
Query: 573 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
L G +E + + M +G+RPD TY LI+ K + + + ++ MI G++P
Sbjct: 757 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816
Query: 633 DQKTYDAIVTPF 644
TY+ +++ F
Sbjct: 817 KTSTYNVLISEF 828
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 213/454 (46%), Gaps = 27/454 (5%)
Query: 214 TFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA---LKVM 270
T+N I LC+ EA + M+K G P+ VS+N +IDG CK G+ A + +
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 271 KKMNLMTGNSVW----------------------PNSVSYNSIINGFCKKGGLLLAEEVL 308
++NL+T + P+ V+++SIIN CK G +L +L
Sbjct: 223 SELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLL 282
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
+M + P+ TY TL+D + +L L +MV RG+ ++VVY ++ L++
Sbjct: 283 REMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKA 342
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
GD+ EA K +++ + P+ +Y L +GLC+ G L+ A + Q+L+ +I + +
Sbjct: 343 GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
+ ++N K M + + P+ +T TVIDG K G E A+ L M
Sbjct: 403 SSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL 462
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLV-DELRKRKLLDATTFNTLISGYSNSGQIDE 547
+ + N I ++ +N L ++ K LV D + K LD + +LI + G +
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEA 522
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
A EM+ G+ + V+YN LI+ + K G A K M +GI PD T+ ++
Sbjct: 523 ALAWAEEMQERGMPWDVVSYNVLISGMLKFG-KVGADWAYKGMREKGIEPDIATFNIMMN 581
Query: 608 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
K+ E ++ L D M G+ P + + +V
Sbjct: 582 SQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVV 615
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 217/490 (44%), Gaps = 6/490 (1%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
++ ++++S + +++ + G E A ++ ++ + + + + + L
Sbjct: 386 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 445
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ + L K M G EN + + L + R+ E ++ M+ G + +
Sbjct: 446 KAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQI 505
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
++ +ID K G D + + W + VSYN +I+G K G + A+
Sbjct: 506 NYTSLIDVFFKGG--DEEAALAWAEEMQERGMPW-DVVSYNVLISGMLKFGKVG-ADWAY 561
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
M + G EP + T+ +++ + G E L+L D+M G+ P+++ N ++ L +
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
G MEEA +L+ M+ I P+ +Y I + ++ K H +L + +
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
N L+ +CK G M RG PD T +++ G + KAL Y+ M++
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 547
PN+ YN+ I GL + E++ R + D T+N LISG + G +
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKG 801
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
+ + EM + GL TYN LI+ G +A+EL+K M +G+ P+ TY T+I+
Sbjct: 802 SMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Query: 608 HFNKK-HHPE 616
K HP+
Sbjct: 862 GLCKLCTHPD 871
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 191/381 (50%), Gaps = 7/381 (1%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
EA+ + M++ P+++ F +++ K D+ + + + +M V + + N
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM---GVSHDLYTCN 111
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
++N FC+ LA LG M+K GFEP + T+ +LI+G+ +EE++ + ++MVE
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G+ P++V+Y +I+ L ++G + A + M + I PD Y L GLC +G +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
L + K + D + N L++ K MI + P+++T ++I+G
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA 529
C G ++A +++ M P++ Y S ING CK D A + E+ ++ L
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 530 T-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK---E 585
T T+ TLI G+ G+ + A + + M S G+ N TYN L++ LC NG ++A E
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 586 LMKMMIMQGIRPDCITYTTLI 606
M+ M G+ P+ TY L+
Sbjct: 412 DMQKREMDGVAPNIWTYNVLL 432
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 219/474 (46%), Gaps = 7/474 (1%)
Query: 161 AYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY 220
A D+ + L S+ + L+ + ++ D L + G ++ T NL +
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 221 ALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNS 280
C+ + A + + +M+K G P++V+F +I+G C ++ A+ ++ +M M
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM---G 172
Query: 281 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 340
+ P+ V Y +II+ CK G + A + M G P V Y +L++G G ++
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 341 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
L M +R + P+++ +N+++ + G +A ++ ++MI I P+ ++Y L G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 401 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 460
C G + EA ++ + D + L+N CK M +GL +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 520
T T+I G ++G A +++ M+ PN+ YN ++ LC A + ++
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 521 LRKRKLLDAT----TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
++KR++ T+N L+ G +G++++A + +M+ + +TY +I +CK
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 630
G + A L + +G++P+ +TYTT+I+ ++ E L M GV
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 179/398 (44%), Gaps = 42/398 (10%)
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M G ++ TF I C R+ EA++++ +M++ G P+VV + IID CK G
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
++ AL + +M + P+ V Y S++NG C G A+ +L M K +P V T
Sbjct: 193 VNYALSLFDQME---NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
+ LID + + G ++ L +EM+ + PNI Y S++ G ++EA ++ M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
K PD +Y L G C+ + +A+K+ ++ + L + + L+ +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK--MDE-QPNLTIYN 499
M++RG+PP++ T ++ C G +KAL ++ M K MD PN+ YN
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 500 SFINGLCKMASTDVAKNLVDELRKRKL--------------------------------- 526
++GLC + A + +++RKR++
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 527 ---LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+ T+ T+ISG G EA L +MK G+S
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 142/311 (45%), Gaps = 1/311 (0%)
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
E+L L MVE P+I+ + +L + + + + + + D Y+
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
+L C++ A +++K D + L+N C M+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G+ PDV T+ID CK G+ AL L++ M +P++ +Y S +NGLC A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 515 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
+L+ + KRK+ D TFN LI + G+ +A L EM + ++ N TY +LIN
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
C GC +EA+++ +M +G PD + YT+LI F K ++ + + M KG+ +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 634 QKTYDAIVTPF 644
TY ++ F
Sbjct: 352 TITYTTLIQGF 362
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 160/339 (47%), Gaps = 1/339 (0%)
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A ++ MV++ PS+ + L++ A+ + + LCD + G+ ++ N ++
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
+ AS L M+ PD ++ L G C + EA+ + NQ+++ +
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
D +++ +CK+ M G+ PDV ++++G C G A L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 542
GM K +P++ +N+ I+ K A+ L +E+ + + + T+ +LI+G+
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
G +DEA + M++ G + V Y +LIN CK ++A ++ M +G+ + ITY
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
TTLI F + P + +M+ +GV P+ +TY+ ++
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 159/356 (44%), Gaps = 43/356 (12%)
Query: 136 ESYQHCPAV--FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDI 193
E+Y P V + +LV G A ++ + R V +N + V+
Sbjct: 204 ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF 263
Query: 194 DRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMI 253
LY M N+ T+ I C E V EA + Y M G FP+VV++ +
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 254 IDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 313
I+G CK +D A+K+ + M+ + N+++Y ++I GF + G +A+EV MV
Sbjct: 324 INGFCKCKKVDDAMKIFYE---MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 314 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER---GLFPNIVVYNSILYWLYRHGD 370
G P++RTY L+ G ++++L + ++M +R G+ PNI YN +L+ L +G
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
+E+A V DM + + +Y I+ +G+C+ G + A
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA--------------------- 479
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+N C S+ ++G+ P+V T T+I G + G +A L+ M
Sbjct: 480 -VNLFC-------------SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 122/274 (44%), Gaps = 34/274 (12%)
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
EA + + M++ P + L + + + L + + + D ++ N+L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
N C+S G M+ G PD+ T ++I+G C E+A+ + N M++M +
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLT 552
P++ +Y + I+ LCK +G ++ A L
Sbjct: 175 PDVVMYTTIIDSLCK----------------------------------NGHVNYALSLF 200
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
+M++ G+ + V Y +L+N LC +G +A L++ M + I+PD IT+ LI F K+
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 613 HHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
+ L++ MI + P+ TY +++ F +
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 133/305 (43%), Gaps = 20/305 (6%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMD------------ESYQH---- 140
+L+ L NS + +A SL+R + ++ + AL+D E Y
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 141 --CPAVFD--ALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRF 196
P +F +L+ G + A + + T+GC V A+ + ++ + +D
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 197 WRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDG 256
+++ M G N T+ I + + A V M+ G PN+ ++N+++
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 257 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 316
C G + AL + + M + V PN +YN +++G C G L A V DM K
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
+ + TY +I G + G ++ ++ L + +G+ PN+V Y +++ L+R G EA
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Query: 377 VLSDM 381
+ M
Sbjct: 517 LFRKM 521
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 221/478 (46%), Gaps = 31/478 (6%)
Query: 172 GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKE-----C 226
GC S +N+ + D ++L K M GH+ +N+ I ++C + C
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 227 RVVEAITVIY-RMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNS 285
+++ Y ML G N ++ + C G + A V+++M G P++
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREM---IGQGFIPDT 483
Query: 286 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
+Y+ ++N C + LA + +M + G V TY ++D + + G +E++ + +E
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
M E G PN+V Y ++++ + + A+++ M+ + P+ +Y+ L +G C+ G
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
+ +A ++ ++ C S P+V T
Sbjct: 604 VEKACQIFERM-------------------CGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
++DG CK E+A +L + M +PN +Y++ I+GLCK+ D A+ + E+ +
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 526 LLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
AT T+++LI Y + D A + ++M + N V Y +I+ LCK G +EA
Sbjct: 705 F-PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+LM+MM +G +P+ +TYT +I F E + L + M KGV P+ TY ++
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 139/561 (24%), Positives = 239/561 (42%), Gaps = 68/561 (12%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVG 156
+ + L ++ + +A S++R +I +G P D S + ++
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIG-QGFIP--------DTS------TYSKVLNYLCNAS 497
Query: 157 ATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFN 216
E A+ + E++ G + V+ + + + I++ + + M G NV T+
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 217 LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM--- 273
I+A K +V A + ML +G PN+V+++ +IDG CK G ++ A ++ ++M
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 274 ----------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
NS PN V+Y ++++GFCK + A ++L M G EP+ Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
LIDG + G L+E+ + EM E G + Y+S++ ++ + ASKVLS M++
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
P+ Y + +GLC+ G EA KL
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM---------------------------- 769
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
M +G P+V T +IDG +G E L L M PN Y I+
Sbjct: 770 -------MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 504 GLCKMASTDVAKNLVDELRKRKLLDATT-FNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
CK + DVA NL++E+++ T + +I G++ + E+ GL E+ +
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAP 880
Query: 563 NRVTYNTLINLLCKNGCDEEAKELM-KMMIMQGIRPD-CITYTTLITHFNKKHHPEEVIA 620
Y LI+ L K E A L+ ++ D TY +LI + E
Sbjct: 881 FLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940
Query: 621 LHDYMILKGVIPDQKTYDAIV 641
L M KGVIP+ +++ +++
Sbjct: 941 LFSEMTKKGVIPEMQSFCSLI 961
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 228/542 (42%), Gaps = 59/542 (10%)
Query: 138 YQHCPAVFDALVRACTQVGATEGAYDVICELRTR---------GCLVSVHAWNNFLSHLV 188
Y+H V++ALV + + + + ++R LV H N S +
Sbjct: 161 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS--I 218
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLK------DG 242
+ ++ R + F + +T+N I A K R+ ++ ++I+R + DG
Sbjct: 219 ALEELGR-------LKDFRFRPSRSTYNCLIQAFLKADRL-DSASLIHREMSLANLRMDG 270
Query: 243 TFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL 302
++++ CK G AL +++ N + P++V Y +I+G C+
Sbjct: 271 FTLRCFAYSL-----CKVGKWREALTLVETENFV------PDTVFYTKLISGLCEASLFE 319
Query: 303 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
A + L M P+V TY+TL+ G L R+ + M+ G +P+ ++NS++
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN------GYLTEALKLHNQI 416
+ GD A K+L M+ P Y IL +C + L A K ++++
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 417 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 476
L ++ + +++ +C + MI +G PD T + V++ C
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTL 535
E A L+ M + ++ Y ++ CK + A+ +E+R+ + T+ L
Sbjct: 500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559
Query: 536 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ-- 593
I Y + ++ A L M S G N VTY+ LI+ CK G E+A ++ + M
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619
Query: 594 --------------GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 639
RP+ +TY L+ F K H EE L D M ++G P+Q YDA
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 640 IV 641
++
Sbjct: 680 LI 681
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 145/366 (39%), Gaps = 10/366 (2%)
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
N ++ C+ G +A E LG + F PS TY LI + + L+ + + EM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
L + Y L + G EA L+ + ++ PD Y L GLC E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A+ N++ + + + + LL M+ G P +++
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST------DVAKNLVDE-L 521
C G+ A +L M+K P +YN I +C + D+A+ E L
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 522 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
+L+ ++ ++G+ ++AF + EM G + TY+ ++N LC E
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 582 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
A L + M G+ D TYT ++ F K E+ + M G P+ TY A++
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 642 TPFLLA 647
+L A
Sbjct: 561 HAYLKA 566
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 142/323 (43%), Gaps = 44/323 (13%)
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRG--------------- 172
+LL+A+ E + V+DAL+ +VG + A +V E+ G
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 173 --------------------CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENV 212
C +V + + L +V D ++L + M G NV
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 213 NTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKK 272
T+ I ++ + ++ RM G PN V++ ++ID CK G+LD+A ++++
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 273 MNLMTGNSVWP-NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
M + WP ++ Y +I GF K+ + + +L ++ + P + Y LID
Sbjct: 840 MK----QTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLI 893
Query: 332 RWGSLEESLRLCDEMV--ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
+ LE +LRL +E+ L YNS++ L +E A ++ S+M K + P+
Sbjct: 894 KAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953
Query: 390 QYSYAILTEGLCRNGYLTEALKL 412
S+ L +GL RN ++EAL L
Sbjct: 954 MQSFCSLIKGLFRNSKISEALLL 976
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 217/439 (49%), Gaps = 5/439 (1%)
Query: 161 AYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY 220
A + C++ L S+ ++ L + ++N + L++ + G ++ +F I
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 221 ALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNS 280
C+ R+ A++ + +M+K G P++V+F +++G C A+ ++ + + G
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQ---IVGLG 179
Query: 281 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 340
PN V YN+II+ C+KG + A +VL M K G P V TY +LI G+ S
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 341 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
R+ +M+ G+ P+++ +++++ + G + EA K ++MI + + P+ +Y L GL
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 401 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 460
C +G L EA K+ N ++ +A + N L+N CK+ M G+ D
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 520
+T T+ G C+ G A ++ M+ P++ +N ++GLC A +++
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 521 LRKRK-LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 579
L+K K ++ T+N +I G + ++++A+ L + G+S + +TY T++ L +
Sbjct: 420 LQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRL 479
Query: 580 DEEAKELM-KMMIMQGIRP 597
EA EL KM G+ P
Sbjct: 480 WREAHELYRKMQKEDGLMP 498
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 195/398 (48%), Gaps = 5/398 (1%)
Query: 230 EAITVIYRMLKD-GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY 288
EA+ ++R L+ G ++ SF +ID C+ L LAL + KM + P+ V++
Sbjct: 96 EAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKL---GFEPSIVTF 152
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
S++NGFC A ++ +V G+EP+V Y T+ID G + +L + M +
Sbjct: 153 GSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK 212
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
G+ P++V YNS++ L+ G ++++LSDM+ I PD +++ L + + G L E
Sbjct: 213 MGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLE 272
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A K +N++++ + + + N L+N +C ++++G P+ T T+I+
Sbjct: 273 AKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLIN 332
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-L 527
G CK + +++ M + + YN+ G C+ A+ ++ + +
Sbjct: 333 GYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHP 392
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
D TFN L+ G + G+I +A +++ +TYN +I LCK E+A L
Sbjct: 393 DMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLF 452
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
+ ++G+ PD ITY T++ +K E L+ M
Sbjct: 453 CSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 200/413 (48%), Gaps = 12/413 (2%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
+A+T+ M + P++V F+ ++ K + + + + + ++ + + S+
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEML---GISHDLYSFT 118
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
++I+ FC+ L LA LG M+K GFEPS+ T+ +L++G+ E++ L D++V
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G PN+V+YN+I+ L G + A VL M I PD +Y L L +G +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
++ + +++ + D + + L++ K MI R + P++ T ++I+G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LD 528
C G ++A ++ N ++ PN YN+ ING CK D ++ + + + D
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA----K 584
T+NTL GY +G+ A + M S G+ + T+N L++ LC +G +A +
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLE 418
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
+L K + GI ITY +I K E+ L + LKGV PD TY
Sbjct: 419 DLQKSKTVVGI----ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 172/364 (47%), Gaps = 3/364 (0%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
L L +M ++ F +LV V A ++ ++ G +V +N +
Sbjct: 134 LSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDS 193
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L E ++ + K M G +V T+N I L + ++ M++ G P+
Sbjct: 194 LCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPD 253
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
V++F+ +ID K G L L+ K+ N M SV PN V+YNS+ING C G L A++
Sbjct: 254 VITFSALIDVYGKEGQL---LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
VL +V GF P+ TY TLI+GY + +++ +++ M G+ + YN++
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ G A KVL M+ + PD Y++ IL +GLC +G + +AL + K +
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ NI++ +CK+ S+ +G+ PDV T T++ G + +A LY M
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Query: 487 IKMD 490
K D
Sbjct: 491 QKED 494
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 1/311 (0%)
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
++L L +M E P+IV ++ +L + + E + + I D YS+ L
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
+ CR L+ AL +++K + L+N C ++ G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV-AKN 516
P+V T+ID C+ G AL + M KM +P++ YNS I L + V A+
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 517 LVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
L D +R D TF+ LI Y GQ+ EA EM ++ N VTYN+LIN LC
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
+G +EAK+++ +++ +G P+ +TY TLI + K ++ + + M GV D T
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 637 YDAIVTPFLLA 647
Y+ + + A
Sbjct: 362 YNTLYQGYCQA 372
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/570 (25%), Positives = 251/570 (44%), Gaps = 79/570 (13%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
+ LV A Q+G + D++ L G ++N++ + + + M
Sbjct: 210 YTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMV 269
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G +V ++++ I L KE V EA+ ++ +M+K+G PN++++ II G CK G L+
Sbjct: 270 EKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A + ++ L G V + Y ++I+G C+KG L A +LGDM + G +PS+ TY
Sbjct: 330 EAFVLFNRI-LSVGIEV--DEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYN 386
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY-------------------------- 358
T+I+G G + E+ DE V +G+ +++ Y
Sbjct: 387 TVINGLCMAGRVSEA----DE-VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEA 441
Query: 359 ---------NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
N +L G EA + M + + PD +YA + +G C+ G + EA
Sbjct: 442 KIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA 501
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
L++ N++ K + A N +++ +CK + +GL D++T T++
Sbjct: 502 LEMFNELRKSS-VSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHS 560
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA--------------- 514
G + L L G+ +++ L + N I LCK S + A
Sbjct: 561 IHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVT 620
Query: 515 ------KNLVDELRKRKL--------------LDATTFNTLISGYSNSGQIDEAFGLTTE 554
K LVD LR +D + +I+G G + +A L +
Sbjct: 621 FPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSF 680
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
KS G++ N +TYN+LIN LC+ GC EA L + G+ P +TY LI + K+
Sbjct: 681 AKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGL 740
Query: 615 PEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+ L D M+ KG++P+ Y++IV +
Sbjct: 741 FLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 207/451 (45%), Gaps = 56/451 (12%)
Query: 214 TFNLAIYALCKECRVVEAITVIYRMLKDGT---FPNVVSFNMIIDGACKTGSLDLALKVM 270
TF IY ++ + AI V+ M F N V + +I G CK G +LAL
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVC-SAVISGFCKIGKPELALGFF 194
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
+ + + + PN V+Y ++++ C+ G + +++ + GFE Y+ I GY
Sbjct: 195 E--SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGY 252
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
+ G+L ++L EMVE+G+ ++V Y+ ++ L + G++EEA +L MI + + P+
Sbjct: 253 FKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNL 312
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
+Y + GLC+ G L EA L N+IL + D F L++ IC+ G
Sbjct: 313 ITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M RG+ P + T TVI+G C G +A + G++ ++ Y++ ++ K+ +
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV-----GDVITYSTLLDSYIKVQN 427
Query: 511 TDVAKNLVDELRKRKLL----------------------------------------DAT 530
D V E+R+R L D
Sbjct: 428 IDA----VLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTA 483
Query: 531 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
T+ T+I GY +GQI+EA + E++ +SA V YN +I+ LCK G + A E++ +
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIEL 542
Query: 591 IMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
+G+ D T TL+ + + ++ L
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANGGDKGILGL 573
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 142/627 (22%), Positives = 255/627 (40%), Gaps = 124/627 (19%)
Query: 80 FY-NWVGMLFPHSLHSSCTLLQVLVNSRWFTE--------ALSLMRNLIAKEGIA--PLE 128
FY NW+ H L+ L+ R E + S++ + ++KEG L
Sbjct: 244 FYSNWI-----HGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALG 298
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
LL ++ E + + A++R ++G E A+ + + + G V + + +
Sbjct: 299 LLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC 358
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+++R + + M G ++ T+N I LC RV EA V G +V+
Sbjct: 359 RKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVI 413
Query: 249 SFNMIIDGACKTGSLDLALKVMKK-------MNLMTGN---------------------- 279
+++ ++D K ++D L++ ++ M+L+ N
Sbjct: 414 TYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAM 473
Query: 280 ---SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
+ P++ +Y ++I G+CK G + A E+ ++ K+ +V Y +ID + G L
Sbjct: 474 PEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGML 532
Query: 337 EESLRLCDEMVERGLFPNI---------------------VVY--------------NSI 361
+ + + E+ E+GL+ +I +VY N
Sbjct: 533 DTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDA 592
Query: 362 LYWLYRHGDMEEA-----------------SKVLSDMIDKHICPDQY------------- 391
+ L + G E A S +L ++D D Y
Sbjct: 593 ILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSS 652
Query: 392 ----SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
Y I+ GLC+ G+L +AL L + + + + N L+N +C+
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
S+ GL P T +ID CK G A +L + M+ PN+ IYNS ++G CK
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 508 MASTDVAKNLVD-ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
+ T+ A +V ++ R DA T +++I GY G ++EA + TE K +SA+
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQ 593
+ LI C G EEA+ L++ M++
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 210/476 (44%), Gaps = 46/476 (9%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
++++ + FL +L + + + Y + S N +++ +A R +A I
Sbjct: 25 TLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFI 84
Query: 236 -YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIING 294
+ K FP + +I G T D + ++ + + + +P+S+++ S+I
Sbjct: 85 NIHISKASIFPRTHMLDSLIHGFSITRD-DPSKGLLILRDCLRNHGAFPSSLTFCSLIYR 143
Query: 295 FCKKGGLLLAEEVLGDMVKAGFEPSVRTY--ATLIDGYARWGSLEESLRLCDEMVERG-L 351
F +KG + A EVL M + + +I G+ + G E +L + V+ G L
Sbjct: 144 FVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVL 203
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
PN+V Y +++ L + G ++E ++ + D+ D Y+ G + G L +AL
Sbjct: 204 VPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALM 263
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 471
+ M+ +G+ DV + + +IDG
Sbjct: 264 QDRE-----------------------------------MVEKGMNRDVVSYSILIDGLS 288
Query: 472 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDAT 530
K GN E+AL L MIK +PNL Y + I GLCKM + A L + + + +D
Sbjct: 289 KEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEF 348
Query: 531 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
+ TLI G G ++ AF + +M+ G+ + +TYNT+IN LC G EA E+ K
Sbjct: 349 LYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK-- 406
Query: 591 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
G+ D ITY+TL+ + K + + V+ + + + D + ++ FLL
Sbjct: 407 ---GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLL 459
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAK 515
P D + + VI G CK+G E AL + + PNL Y + ++ LC++ D +
Sbjct: 168 PFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVR 227
Query: 516 NLV----DE--------------------------LRKRKLL------DATTFNTLISGY 539
+LV DE ++ R+++ D +++ LI G
Sbjct: 228 DLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGL 287
Query: 540 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
S G ++EA GL +M G+ N +TY +I LCK G EEA L ++ GI D
Sbjct: 288 SKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDE 347
Query: 600 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
Y TLI +K + ++ M +G+ P TY+ ++ +A
Sbjct: 348 FLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 229/491 (46%), Gaps = 5/491 (1%)
Query: 133 LMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVND 192
L + + Q V ++R +++G A ++ +++ +G S N L VE+
Sbjct: 138 LANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGL 197
Query: 193 IDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNM 252
I+ ++ M G V + +++ L + ++ ++ EA + M++ G P+ + +
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257
Query: 253 IIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 312
I+ C+ G ++ A+ +KM + PN +++ S+I+G CKKG + A E+L +MV
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDL---GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV 314
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF-PNIVVYNSILYWLYRHGDM 371
+ G++P+V T+ LIDG + G E++ RL ++V + PN+ Y S++ + +
Sbjct: 315 RNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKL 374
Query: 372 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
A + S M ++ + P+ +Y L G C+ G A +L N + + + ++ N
Sbjct: 375 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 432 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 491
++ +CK + GL D T +I CK + +AL + M K
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 492 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFG 550
+ ++ + N I C+ ++ L + L+ T+ ++IS Y G ID A
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 551 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 610
MK G + TY +LI+ LCK +EA +L + MI +G+ P +T TL +
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 614
Query: 611 KKHHPEEVIAL 621
K++ + L
Sbjct: 615 KRNDSANAMIL 625
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 205/418 (49%), Gaps = 5/418 (1%)
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
R+ EA+ ++ M G P+ ++ N +++ A + G ++ A V +M++ V P+S
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSV---RGVVPDSS 218
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
SY ++ G + G + A+ L M++ GF P T ++ G + ++ +M
Sbjct: 219 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM 278
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
++ G PN++ + S++ L + G +++A ++L +M+ P+ Y++ L +GLC+ G+
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 407 TEALKLHNQILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
+A +L ++++ D + + + ++ CK M +GL P+V T T
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
+I+G+CK G+ +A L N M PN+ YN+ I+ LCK + A L+++
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 526 L-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
L D T+ LI I++A M G A+ N LI C+ +E++
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
L ++++ G+ P TYT++I+ + K+ + + M G +PD TY ++++
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 2/356 (0%)
Query: 291 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
++ F + G L A ++ DM G PS T +++ G +E + + DEM RG
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
+ P+ Y ++ +R G ++EA + L+ MI + PD + ++ LC NG + A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
+++ + + L++ +CK M+ G P+VYT +IDG
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 471 CKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-D 528
CK G TEKA RL+ +++ D +PN+ Y S I G CK + A+ L ++++ L +
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
T+ TLI+G+ +G A+ L M G N TYN I+ LCK EA EL+
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
G+ D +TYT LI K++ + +A M G D + + ++ F
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 181/402 (45%), Gaps = 8/402 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLY-KGM 203
F +L+ + G+ + A++++ E+ G +V+ + L + ++ +RL+ K +
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
S + NV+T+ I CKE ++ A + RM + G FPNV ++ +I+G CK GS
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSF 409
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
A ++M NLM PN +YN+ I+ CKK A E+L G E TY
Sbjct: 410 GRAYELM---NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTY 466
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
LI + + ++L M + G ++ + N ++ R M+E+ ++ ++
Sbjct: 467 TILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS 526
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ P + +Y + C+ G + ALK + + + + D+F+ L++ +CK
Sbjct: 527 LGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDE 586
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
+MI RGL P T+ T+ CK ++ A+ L + +D++ + + +
Sbjct: 587 ACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL---LEPLDKKLWIRTVRTLVR 643
Query: 504 GLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQ 544
LC VA + L K D T + S SG+
Sbjct: 644 KLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 685
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 145/571 (25%), Positives = 250/571 (43%), Gaps = 33/571 (5%)
Query: 27 PTAAAEDIIFRAICVHLKHRRWSAL--------EQLSPKLTTFMVNRVVSEFHNSPHLAL 78
P + I IC L H +S L + L P L ++RV+ F + A+
Sbjct: 38 PQSQNPSKIVDVICSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAI 97
Query: 79 DFYNWVGMLFPH--SLHSSCTLLQVLVNSRWFTEALSLMRNLI----AKEGIAPLELLEA 132
F+ WV ++ + C LL +LV+S+ F A+ + LI KE + +L +
Sbjct: 98 TFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVS 157
Query: 133 LMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVND 192
DE P VFD LV+ ++G E + V E+ G VSV N+ L+ L++++
Sbjct: 158 ATDECNWD-PVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDL 216
Query: 193 IDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNM 252
++ W++Y M G N TFN+ C + E + +M ++G P++V++N
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 253 IIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 312
++ C+ G L A + K +M V P+ V+Y S+I G CK G + A + MV
Sbjct: 277 LVSSYCRRGRLKEAFYLYK---IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV 333
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
G +P +Y TLI Y + G +++S +L EM+ + P+ I+ R G +
Sbjct: 334 DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLL 393
Query: 373 EASKVLSDM------IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE-DA 425
A + ++ I +C L LC+ G A L ++I++ + E
Sbjct: 394 SAVNFVVELRRLKVDIPFEVC------DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKP 447
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
+ N L+ + + G + + D T +I C++G +A L
Sbjct: 448 ETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAE 507
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSG- 543
M + +P+ I + + G CK D A+ L+ ++ D ++N+L+ +G
Sbjct: 508 MFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGC 567
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
+A L M+ LG NR+T LI +L
Sbjct: 568 GYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 202/434 (46%), Gaps = 10/434 (2%)
Query: 215 FNLAIYALCK--ECRVVEAITVIYRMLKDGTFP---NVVSFNMIIDGACKTGSLDLALKV 269
F LA+ LC+ E + ++R+L T + V F+M++ G K G ++ +V
Sbjct: 129 FPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRV 188
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
+++ L +G SV + V+ N ++NG K + +V M + G P+ T+ L +
Sbjct: 189 FREV-LDSGFSV--SVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNV 245
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
+ + E ++M E G P++V YN+++ R G ++EA + M + + PD
Sbjct: 246 FCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPD 305
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
+Y L +GLC++G + EA + ++++ + D S N L+ CK
Sbjct: 306 LVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLH 365
Query: 450 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 509
M+ + PD +T +++G + G A+ + ++ + + I LC+
Sbjct: 366 EMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEG 425
Query: 510 STDVAKNLVDELRKRKLLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
AK+L+D + + + +A T+N LI S I+EA L ++K+ + TY
Sbjct: 426 KPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTY 485
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 627
LI LC+ G + EA+ LM M ++PD L+ + K+ ++ L +
Sbjct: 486 RALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAM 545
Query: 628 KGVIPDQKTYDAIV 641
+ I D ++Y+++V
Sbjct: 546 EFRIFDPESYNSLV 559
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTL 535
E ++Y+ M ++ PN +N N C ++ + ++++ + D T+NTL
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 536 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 595
+S Y G++ EAF L M + + VTY +LI LCK+G EA + M+ +GI
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 596 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
+PDC++Y TLI + K+ ++ L M+ V+PD+ T IV F+
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFV 387
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 230/492 (46%), Gaps = 6/492 (1%)
Query: 138 YQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFW 197
Y+H P V+ +++ ++ +G+ V+ ++ RG + A++ + +
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
++ M G N+ N I + R+ +A+ + RM G PNVV++N +I G
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA-GF 316
C ++ A+++++ M+ P+ VSY +I+ CK+ ++ +++ M K G
Sbjct: 323 CDLHRVEEAIELLEDMH---SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
P TY TLI + +E+L + E+G + + Y++I++ L + G M EA
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 377 VLSDMIDK-HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
++++M+ K H PD +Y + G CR G + +A KL + + S LLN +
Sbjct: 440 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Query: 436 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 495
C++ P+ T + ++ G + G +A + M+ P
Sbjct: 500 CRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 559
Query: 496 TIYNSFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTE 554
N + LC+ T A+ ++E L K ++ F T+I G+ + ++D A + +
Sbjct: 560 VEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDD 619
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
M + A+ TY TL++ L K G EA ELMK M+ +GI P +TY T+I + +
Sbjct: 620 MYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGK 679
Query: 615 PEEVIALHDYMI 626
++++A+ + MI
Sbjct: 680 VDDLVAILEKMI 691
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/544 (24%), Positives = 239/544 (43%), Gaps = 45/544 (8%)
Query: 142 PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYK 201
P F ++ + ++ G A V+ ++ G ++ N + V N +++ R +
Sbjct: 242 PEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLE 301
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
M G V NV T+N I C RV EAI ++ M G P+ VS+ I+ CK
Sbjct: 302 RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Query: 262 SLDLALKVMKKMNLMTGNSVWPNSVSYNS------------------------------- 290
+ +MKKM G + P+ V+YN+
Sbjct: 362 RIVEVRDLMKKMAKEHG--LVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKL 419
Query: 291 ----IINGFCKKGGLLLAEEVLGDMVKAGF-EPSVRTYATLIDGYARWGSLEESLRLCDE 345
I++ CK+G + A++++ +M+ G P V TY +++G+ R G ++++ +L
Sbjct: 420 GYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV 479
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI-CPDQYSYAILTEGLCRNG 404
M G PN V Y ++L + R G EA +++ +M ++H P+ +Y+++ GL R G
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM-NMSEEHWWSPNSITYSVIMHGLRREG 538
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
L+EA + +++ +N+LL +C+ + +G +V
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 598
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
TVI G C+ + AL + + M +++ ++ Y + ++ L K A L+ ++
Sbjct: 599 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML-H 657
Query: 525 KLLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 582
K +D T T+ T+I Y G++D+ + +M + R YN +I LC G EE
Sbjct: 658 KGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM--ISRQKCRTIYNQVIEKLCVLGKLEE 715
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
A L+ ++ R D T L+ + KK P + M + +IPD K + +
Sbjct: 716 ADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSK 775
Query: 643 PFLL 646
+L
Sbjct: 776 RLVL 779
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 216/488 (44%), Gaps = 43/488 (8%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
++ ++R + E A +++ ++ ++GCL ++ + +L + I L K M
Sbjct: 315 YNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA 374
Query: 205 S-FGHVENVNTFNLAIY-----------------------------------ALCKECRV 228
G V + T+N I+ ALCKE R+
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 229 VEAITVIYRMLKDGTFP-NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
EA +I ML G P +VV++ +++G C+ G +D A K+++ +M + PN+VS
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ---VMHTHGHKPNTVS 491
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
Y +++NG C+ G L A E++ + + P+ TY+ ++ G R G L E+ + EMV
Sbjct: 492 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+G FP V N +L L R G EA K + + ++K + ++ + G C+N L
Sbjct: 552 LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELD 611
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
AL + + + + D F+ L++ + K M+ +G+ P T TVI
Sbjct: 612 AALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE-LRKRKL 526
C++G + + + MI Q TIYN I LC + + A L+ + LR
Sbjct: 672 HRYCQMGKVDDLVAILEKMI--SRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASR 729
Query: 527 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
DA T L+ GY G A+ + M + L + L L G +EA +L
Sbjct: 730 SDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKL 789
Query: 587 MKMMIMQG 594
M ++ +G
Sbjct: 790 MLRLVERG 797
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 15/451 (3%)
Query: 194 DRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMI 253
DR WR + H V L + + K C+ + V+ M + G + +F+ +
Sbjct: 198 DRQWR-------YRHDPMVYYSMLEVLSKTKLCQGSRRVLVL--MKRRGIYRTPEAFSRV 248
Query: 254 IDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 313
+ + G L ALKV+ LM V PN + N+ I+ F + L A L M
Sbjct: 249 MVSYSRAGQLRDALKVL---TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQV 305
Query: 314 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 373
G P+V TY +I GY +EE++ L ++M +G P+ V Y +I+ +L + + E
Sbjct: 306 VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVE 365
Query: 374 ASKVLSDMIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
++ M +H + PDQ +Y L L ++ + EAL + D + ++
Sbjct: 366 VRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIV 425
Query: 433 NYICKSXXXXXXXXXXGSMITRG-LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 491
+ +CK M+++G PPDV T V++G C+LG +KA +L M
Sbjct: 426 HALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH 485
Query: 492 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 550
+PN Y + +NG+C+ + A+ +++ + ++ T++ ++ G G++ EA
Sbjct: 486 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 545
Query: 551 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 610
+ EM G V N L+ LC++G EA++ M+ + +G + + +TT+I F
Sbjct: 546 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 605
Query: 611 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ + +++ D M L D TY +V
Sbjct: 606 QNDELDAALSVLDDMYLINKHADVFTYTTLV 636
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 223/494 (45%), Gaps = 8/494 (1%)
Query: 155 VGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNT 214
+G +E Y+ L ++ ++ +N + NDI++ L M G+ +
Sbjct: 177 LGRSEKLYEAF--LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVN 234
Query: 215 FNLAIYALCKECRV--VEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKK 272
++L I +L + ++ V + + + +D +V N II G K+G AL+++
Sbjct: 235 YSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLG- 293
Query: 273 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 332
M TG S + + SII+ G L AE + ++ ++G +P R Y L+ GY +
Sbjct: 294 MAQATGLSA--KTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVK 351
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
G L+++ + EM +RG+ P+ Y+ ++ G E A VL +M + P+ +
Sbjct: 352 TGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFV 411
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
++ L G G + ++ ++ + D N++++ K M+
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 512
+ G+ PD T T+ID +CK G A ++ M + P T YN IN D
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWD 531
Query: 513 VAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 571
K L+ +++ + +L + T TL+ Y SG+ ++A EMKS+GL + YN LI
Sbjct: 532 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Query: 572 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 631
N + G E+A ++M G++P + +LI F + E A+ YM GV
Sbjct: 592 NAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVK 651
Query: 632 PDQKTYDAIVTPFL 645
PD TY ++ +
Sbjct: 652 PDVVTYTTLMKALI 665
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 213/513 (41%), Gaps = 48/513 (9%)
Query: 128 ELLEA-LMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
+L EA L+ + P ++AL+ AC + E A ++I ++R G ++ +
Sbjct: 182 KLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQS 241
Query: 187 LVEVNDIDR--FWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF 244
L N ID RLYK + +V N I K +A+ ++ G
Sbjct: 242 LTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLS 301
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
+ II +G L+ + + + P + +YN+++ G+ K G L A
Sbjct: 302 AKTATLVSIISALADSGR---TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
E ++ +M K G P TY+ LID Y G E + + EM + PN V++ +L
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAI---------------------LTEGL--- 400
G+ ++ +VL +M + PD+ Y + L+EG+
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478
Query: 401 -----------CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
C++G A ++ + + + A + NI++N G
Sbjct: 479 RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLG 538
Query: 450 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 509
M ++G+ P+V T T++D K G A+ M + +P+ T+YN+ IN +
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 598
Query: 510 STDVAKN----LVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 565
++ A N + + K LL N+LI+ + + EAF + MK G+ + V
Sbjct: 599 LSEQAVNAFRVMTSDGLKPSLL---ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVV 655
Query: 566 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 598
TY TL+ L + ++ + + MIM G +PD
Sbjct: 656 TYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
+++ M G + T+N+ I + + R + ++ +M G PNVV+ ++D
Sbjct: 501 MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 560
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K+G + A++ +++M + + P+S YN++IN + ++G A M G +P
Sbjct: 561 KSGRFNDAIECLEEMKSV---GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
S+ +LI+ + E+ + M E G+ P++V Y +++ L R ++ V
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
+MI PD+ + ++L L Y+ + L+
Sbjct: 678 EEMIMSGCKPDRKARSMLRSAL---RYMKQTLR 707
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 469 GNCKLGNT-EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK--NLVDELRKRK 525
G C N EKAL L M + Q + Y+ I L + D L E+ + K
Sbjct: 205 GACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDK 264
Query: 526 L-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
L LD N +I G++ SG +A L ++ GLSA T ++I+ L +G EA+
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
L + + GI+P Y L+ + K ++ ++ M +GV PD+ TY ++ +
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 645 LLA 647
+ A
Sbjct: 385 VNA 387
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 224/473 (47%), Gaps = 23/473 (4%)
Query: 54 LSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALS 113
LS L F+ VV + N+PH+ F+ + + +N R +
Sbjct: 63 LSKNLNPFISFEVVKKLDNNPHIGFRFWEFS---------------RFKLNIRHSFWTYN 107
Query: 114 LMRNLIAKEGIAPL--ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICE-LRT 170
L+ + K G+ L ++ E + + + LV + + G A ++ +
Sbjct: 108 LLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEV 167
Query: 171 RGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVE 230
GC + V N+ L+ LV+++ ++ +L+ F + TFN+ I LC + +
Sbjct: 168 EGCCMVV---NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 231 AITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNS 290
A+ ++ M G P++V++N +I G CK+ L+ A ++ K ++ +G+ P+ V+Y S
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK--DVKSGSVCSPDVVTYTS 282
Query: 291 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
+I+G+CK G + A +L DM++ G P+ T+ L+DGYA+ G + + + +M+ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
FP++V + S++ R G + + ++ +M + + P+ ++Y+IL LC L +A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
+L Q+ D+I F N +++ CK+ M + PD T +I G+
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
C G +A+ +++ M+ + P+ +S ++ L K A +L RK
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 205/455 (45%), Gaps = 15/455 (3%)
Query: 195 RFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
RFW + + H + T+NL +LCK A + M DG PN ++
Sbjct: 88 RFWEFSRFKLNIRH--SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLV 145
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
+ G L A + L+ V + NS++N K + A ++ + ++
Sbjct: 146 SSFAEKGKLHFATAL-----LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRF 200
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
+T+ LI G G E++L L M G P+IV YN+++ + ++ +A
Sbjct: 201 QSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKA 260
Query: 375 SKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 433
S++ D+ +C PD +Y + G C+ G + EA L + +L+ + + N+L++
Sbjct: 261 SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 434 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 493
K+ G MI+ G PDV T ++IDG C++G + RL+ M P
Sbjct: 321 GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLT 552
N Y+ IN LC A+ L+ +L + ++ +N +I G+ +G+++EA +
Sbjct: 381 NAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIV 440
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
EM+ +++T+ LI C G EA + M+ G PD IT ++L++ K
Sbjct: 441 EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Query: 613 HHPEEVIALHDYMILKG----VIP-DQKTYDAIVT 642
+E L+ + KG V+P + KT +A +
Sbjct: 501 GMAKEAYHLNQ-IARKGQSNNVVPLETKTANATLA 534
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 173/417 (41%), Gaps = 51/417 (12%)
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
+ L +S W +YN + CK G LA ++ M G P+ R L+ +A
Sbjct: 94 RFKLNIRHSFW----TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA 149
Query: 332 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 391
G L + L + E + +V NS+L L + +E+A K+ + + C D
Sbjct: 150 EKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK 207
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
++ IL GLC G +AL+L + F D + N L+ CKS +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 452 ITRGL-PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
+ + PDV T ++I G CK G +A L + M+++ P +N ++G K
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 511 TDVAKNLVDELRKRKLL-----DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 565
A +E+R + + D TF +LI GY GQ+ + F L EM + G+ N
Sbjct: 328 MLTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 566 TYNTLINLLC-----------------------------------KNGCDEEAKELMKMM 590
TY+ LIN LC K G EA +++ M
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 591 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
+ +PD IT+T LI K E +++ M+ G PD+ T ++++ L A
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 224/473 (47%), Gaps = 23/473 (4%)
Query: 54 LSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALS 113
LS L F+ VV + N+PH+ F+ + + +N R +
Sbjct: 63 LSKNLNPFISFEVVKKLDNNPHIGFRFWEFS---------------RFKLNIRHSFWTYN 107
Query: 114 LMRNLIAKEGIAPL--ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICE-LRT 170
L+ + K G+ L ++ E + + + LV + + G A ++ +
Sbjct: 108 LLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEV 167
Query: 171 RGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVE 230
GC + V N+ L+ LV+++ ++ +L+ F + TFN+ I LC + +
Sbjct: 168 EGCCMVV---NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 231 AITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNS 290
A+ ++ M G P++V++N +I G CK+ L+ A ++ K ++ +G+ P+ V+Y S
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK--DVKSGSVCSPDVVTYTS 282
Query: 291 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
+I+G+CK G + A +L DM++ G P+ T+ L+DGYA+ G + + + +M+ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
FP++V + S++ R G + + ++ +M + + P+ ++Y+IL LC L +A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
+L Q+ D+I F N +++ CK+ M + PD T +I G+
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
C G +A+ +++ M+ + P+ +S ++ L K A +L RK
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 205/455 (45%), Gaps = 15/455 (3%)
Query: 195 RFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
RFW + + H + T+NL +LCK A + M DG PN ++
Sbjct: 88 RFWEFSRFKLNIRH--SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLV 145
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
+ G L A + L+ V + NS++N K + A ++ + ++
Sbjct: 146 SSFAEKGKLHFATAL-----LLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRF 200
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
+T+ LI G G E++L L M G P+IV YN+++ + ++ +A
Sbjct: 201 QSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKA 260
Query: 375 SKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 433
S++ D+ +C PD +Y + G C+ G + EA L + +L+ + + N+L++
Sbjct: 261 SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 434 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 493
K+ G MI+ G PDV T ++IDG C++G + RL+ M P
Sbjct: 321 GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLT 552
N Y+ IN LC A+ L+ +L + ++ +N +I G+ +G+++EA +
Sbjct: 381 NAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIV 440
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
EM+ +++T+ LI C G EA + M+ G PD IT ++L++ K
Sbjct: 441 EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Query: 613 HHPEEVIALHDYMILKG----VIP-DQKTYDAIVT 642
+E L+ + KG V+P + KT +A +
Sbjct: 501 GMAKEAYHLNQ-IARKGQSNNVVPLETKTANATLA 534
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 173/417 (41%), Gaps = 51/417 (12%)
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
+ L +S W +YN + CK G LA ++ M G P+ R L+ +A
Sbjct: 94 RFKLNIRHSFW----TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA 149
Query: 332 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 391
G L + L + E + +V NS+L L + +E+A K+ + + C D
Sbjct: 150 EKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTK 207
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
++ IL GLC G +AL+L + F D + N L+ CKS +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 452 ITRGL-PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
+ + PDV T ++I G CK G +A L + M+++ P +N ++G K
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 511 TDVAKNLVDELRKRKLL-----DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 565
A +E+R + + D TF +LI GY GQ+ + F L EM + G+ N
Sbjct: 328 MLTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 566 TYNTLINLLC-----------------------------------KNGCDEEAKELMKMM 590
TY+ LIN LC K G EA +++ M
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 591 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
+ +PD IT+T LI K E +++ M+ G PD+ T ++++ L A
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 147/607 (24%), Positives = 258/607 (42%), Gaps = 58/607 (9%)
Query: 74 PHLALDFYNWVGMLF--PHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLE 131
P ALD + + +F ++ S TLL V ++ + + SL G+AP
Sbjct: 94 PDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFA-YFETAGVAP----- 147
Query: 132 ALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVN 191
+ Q ++ L++ + E A + + G V +++ ++ L +
Sbjct: 148 -----NLQ----TYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAG 198
Query: 192 DIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGT-FPNVVSF 250
+D L+ M G +V +N+ I KE A+ + R+L+D + +PNV +
Sbjct: 199 KLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTH 258
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
N++I G K G +D LK+ ++M N + +Y+S+I+G C G + AE V +
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMK---QNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
+ + V TY T++ G+ R G ++ESL L ++E NIV YN ++ L +G
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGK 374
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
++EA+ + M K D+ +Y I GLC NGY+ +AL + ++ D ++
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLP--------------------------------- 457
+++ +CK M G+
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 458 --PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
P V + +I G CK G +A M++ +P+L Y+ + GLC+ D+A
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554
Query: 516 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
L + + L D N LI G + G++D+A + M+ +AN VTYNTL+
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
K G A + M G++PD I+Y T++ + D G+ P
Sbjct: 615 FKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTV 674
Query: 635 KTYDAIV 641
T++ +V
Sbjct: 675 YTWNILV 681
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 192/417 (46%), Gaps = 7/417 (1%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
L++ E + + + +L+ G + A V EL R + V +N L
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML-KDGTFP 245
I L++ M V N+ ++N+ I L + ++ EA T+I+R++ G
Sbjct: 335 FCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEA-TMIWRLMPAKGYAA 392
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+ ++ + I G C G ++ AL VM+++ G+ + +Y SII+ CKK L A
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGH---LDVYAYASIIDCLCKKKRLEEAS 449
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
++ +M K G E + LI G R L E+ EM + G P +V YN ++ L
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGL 509
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ G EAS + +M++ PD +Y+IL GLCR+ + AL+L +Q L+ L D
Sbjct: 510 CKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDV 569
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
NIL++ +C +M R ++ T T+++G K+G++ +A ++
Sbjct: 570 MMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGY 629
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSN 541
M KM QP++ YN+ + GLC A D+ R + T+N L+ N
Sbjct: 630 MYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%)
Query: 531 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
++NTL++ + + Q + L ++ G++ N TYN LI + CK E+A+ + M
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 591 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
+G +PD +Y+T+I K ++ + L D M +GV PD Y+ ++ FL
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 225/494 (45%), Gaps = 53/494 (10%)
Query: 160 GAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAI 219
A+D++ +L + +N LS L DI R L M +V T + I
Sbjct: 277 AAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILI 336
Query: 220 YALCKECRVVEAITVIYRM----LKDGTF--PNVVSFNMIIDGACKTGSLDLALKVMKKM 273
LCK RV EA+ V +M DG + + FN +IDG CK G L A +++ +M
Sbjct: 337 NTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 274 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 333
L PN+V+YN +I+G+C+ G L A+EV+ M + +P+V T T++ G R
Sbjct: 397 KL--EERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 334 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 393
L ++ +M + G+ N+V Y ++++ ++E+A M++ PD Y
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Query: 394 AILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 453
L GLC+ +A+++ ++ + D + N+L+ C
Sbjct: 515 YALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC----------------- 557
Query: 454 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 513
D N NTEK + M K ++P+ YN+ I+ K +
Sbjct: 558 --------------DKN----NTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 514 AKNLVDELRKRKLLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA----NRVTY 567
+ +++++R+ L D T T+ +I Y + G++DEA L K +GL + N V Y
Sbjct: 600 VERMMEQMREDGL-DPTVTTYGAVIDAYCSVGELDEALKL---FKDMGLHSKVNPNTVIY 655
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 627
N LIN K G +A L + M M+ +RP+ TY L N+K E ++ L D M+
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Query: 628 KGVIPDQKTYDAIV 641
+ P+Q T + ++
Sbjct: 716 QSCEPNQITMEILM 729
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 202/451 (44%), Gaps = 17/451 (3%)
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRML-KDGTFP-NVVSFNMIIDGACKTGSLD 264
+++N N+ + L + V +A V+ ML K+ FP N ++ ++++ K G L
Sbjct: 180 SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWK-GRLL 238
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
K++ ++ + + V PNSV I+ CK A ++L D++K +
Sbjct: 239 TEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFN 298
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
L+ R + L +M E + P++V ++ L + ++EA +V M K
Sbjct: 299 ALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGK 358
Query: 385 H------ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE----DAFSLNILLNY 434
I D + L +GLC+ G L EA +L +++ L E +A + N L++
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL---LVRMKLEERCAPNAVTYNCLIDG 415
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
C++ M + P+V T T++ G C+ A+ + M K + N
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTT 553
+ Y + I+ C +++ + A +++ + DA + LISG + +A +
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
++K G S + + YN LI L C E+ E++ M +G +PD ITY TLI+ F K
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 614 HPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
E V + + M G+ P TY A++ +
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 4/273 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
++ L+ + G E A +V+ ++ +V N + + + ++ + M
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G NV T+ I+A C V +A+ +ML+ G P+ + +I G C+
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A++V++K+ G S+ + ++YN +I FC K E+L DM K G +P TY
Sbjct: 529 DAIRVVEKLK-EGGFSL--DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYN 585
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM-ID 383
TLI + + E R+ ++M E GL P + Y +++ G+++EA K+ DM +
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLH 645
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
+ P+ Y IL + G +AL L ++
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 10/217 (4%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
++ AL+ QV A V+ +L+ G + + A+N + + N+ ++ + + M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM 572
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G + T+N I K ++ +M +DG P V ++ +ID C G L
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG----GLLLAEEVLGDMVKAGFEPS 319
D ALK+ K M L + V PN+V YN +IN F K G L L EE+ MV+ P+
Sbjct: 633 DEALKLFKDMGLHS--KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR----PN 686
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 356
V TY L E L+L DEMVE+ PN +
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQI 723
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 8/174 (4%)
Query: 158 TEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
TE Y+++ ++ G +N +S + D + R+ + M G V T+
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 218 AIYALCKECRVVEAITVIYRM-LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
I A C + EA+ + M L PN V +N++I+ K G+ AL + ++M +
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM- 680
Query: 277 TGNSVWPNSVSYNSIINGFCKK--GGLLLAEEVLGDMVKAGFEPSVRTYATLID 328
V PN +YN++ +K G LL +++ +MV+ EP+ T L++
Sbjct: 681 --KMVRPNVETYNALFKCLNEKTQGETLL--KLMDEMVEQSCEPNQITMEILME 730
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 246/517 (47%), Gaps = 40/517 (7%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
+++ + + SY+ ++ + + E A + +++ G + ++ F+S
Sbjct: 29 VQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISG 88
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L +V D L M + G + ++ FN+ + LC+E +V A+ + M++ G P+
Sbjct: 89 LCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPD 148
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
VVS+ ++I+G + G + A+++ N M + V P++ + +++ G C + LA E
Sbjct: 149 VVSYTILINGLFRAGKVTDAVEI---WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 307 VLGDMVK-AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
++ + +K A + S Y LI G+ + G +E++ L M + G P++V YN +L +
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
Y + ++ A V+++M+ I D YSY L + CR ++ K +N ++K
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR---VSHPDKCYNFMVK------- 315
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
M RG DV + +T+I+ C+ NT KA RL+
Sbjct: 316 ------------------------EMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEE 350
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 544
M + N+ Y S I + ++ VAK L+D++ + L D + T++ SG
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
+D+A+G+ +M ++ + ++YN+LI+ LC++G EA +L + M + PD +T+
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+I + + D M+ KG D+ D ++
Sbjct: 471 IIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 221/469 (47%), Gaps = 13/469 (2%)
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
A+ + +++LV+ ID +++ M + +N I L +E R A + + M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
G +++ I G CK DL ++ M + P+ ++N ++ C++
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETL---GFIPDIWAFNVYLDLLCRE 127
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
+ A + MV+ G EP V +Y LI+G R G + +++ + + M+ G+ P+
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDK-HICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
+++ L ++ A +++++ I + Y L G C+ G + +A L + +
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
K D + N+LLNY + M+ G+ D Y+ ++ +C++ + +
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 478 KALRLYNGMIKMDEQP----NLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTF 532
K YN M+K + +P ++ Y++ I C+ ++T A L +E+R++ + ++ T+
Sbjct: 308 KC---YNFMVK-EMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY 363
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
+LI + G A L +M LGLS +R+ Y T+++ LCK+G ++A + MI
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 593 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
I PD I+Y +LI+ + E I L + M K PD+ T+ I+
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 183/395 (46%), Gaps = 5/395 (1%)
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
+N I + +LA + M M G S+ P +Y+ I+G CK L + +L
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPM-GFSLIP--FTYSRFISGLCKVKKFDLIDALLS 103
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
DM GF P + + +D R + +++ MV+RG P++V Y ++ L+R G
Sbjct: 104 DMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAG 163
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE-DAFSL 428
+ +A ++ + MI + PD + A L GLC + A ++ + +K ++
Sbjct: 164 KVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVY 223
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
N L++ CK+ M G PD+ T +++ ++A + M++
Sbjct: 224 NALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR 283
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKN-LVDELRKRKLLDATTFNTLISGYSNSGQIDE 547
Q + YN + C+++ D N +V E+ R D +++TLI + + +
Sbjct: 284 SGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRK 343
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
A+ L EM+ G+ N VTY +LI + G AK+L+ M G+ PD I YTT++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 608 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
H K + ++ + + MI + PD +Y+++++
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLIS 438
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 150/328 (45%), Gaps = 4/328 (1%)
Query: 147 ALVRACTQVGATEGAYDVICE-LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGS 205
ALV + AY+++ E +++ +S +N +S + I++ L M
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 206 FGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDL 265
G ++ T+N+ + + A V+ M++ G + S+N ++ C+ D
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308
Query: 266 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 325
M K G + + VSY+++I FC+ A + +M + G +V TY +
Sbjct: 309 CYNFMVKEMEPRG---FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
LI + R G+ + +L D+M E GL P+ + Y +IL L + G++++A V +DMI+
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
I PD SY L GLCR+G +TEA+KL + + D + ++ + +
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAY 485
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKL 473
M+ +G D T+I +C +
Sbjct: 486 KVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 153/363 (42%), Gaps = 41/363 (11%)
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
Y + I + G ++ ++++ DEM YN + L R E A + DM
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 382 IDKHICPDQYSYAILTEGLCRNGY--LTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
++Y+ GLC+ L +AL + L F I D ++ N+ L+ +C+
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGF--IPDIWAFNVYLDLLCREN 128
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
M+ RG PDV + +I+G + G A+ ++N MI+ P+
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 500 SFINGLCKMASTDVAKNLVDELRK--RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
+ + GLC D+A +V E K R L +N LISG+ +G+I++A L + M
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC------------------ 599
+G + VTYN L+N N + A+ +M M+ GI+ D
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308
Query: 600 -----------------ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
++Y+TLI F + + + L + M KG++ + TY +++
Sbjct: 309 CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 643 PFL 645
FL
Sbjct: 369 AFL 371
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 40/347 (11%)
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
M P+ V++ +++NG C +G +L A ++ MV+ G +P Y T+I+G + G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
E +L L +M E + ++V+YN+I+ L + G A + ++M DK I PD +Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ + CR+G T+A Q+L+ MI R
Sbjct: 117 MIDSFCRSGRWTDA----EQLLR-------------------------------DMIERQ 141
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
+ PDV T + +I+ K G +A +Y M++ P YNS I+G CK + AK
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 516 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
++D + + D TF+TLI+GY + ++D + EM G+ AN VTY TLI+
Sbjct: 202 RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
C+ G + A++L+ +MI G+ P+ IT+ +++ K + A+
Sbjct: 262 CQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 161/315 (51%), Gaps = 7/315 (2%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
+V TF + LC E RV++A+ ++ RM+++G P + II+G CK G + AL ++
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
KM + + V YN+II+ CK G + A+ + +M G P V TY+ +ID +
Sbjct: 65 SKME---ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
R G ++ +L +M+ER + P++V +++++ L + G + EA ++ DM+ + I P
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
+Y + +G C+ L +A ++ + + D + + L+N CK+
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M RG+ + T T+I G C++G+ + A L N MI PN + S + LC
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301
Query: 511 TDVAKNLVDELRKRK 525
A ++++L+K +
Sbjct: 302 LRKAFAILEDLQKSE 316
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 160/320 (50%), Gaps = 8/320 (2%)
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
M++ G P+VV+F +++G C G + AL ++ +M V Y +IING CK
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRM-------VEEGHQPYGTIINGLCK 53
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
G A +L M + + V Y +ID + G + L EM ++G+FP+++
Sbjct: 54 MGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
Y+ ++ R G +A ++L DMI++ I PD +++ L L + G ++EA +++ +L
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
+ + + N +++ CK SM ++ PDV T +T+I+G CK +
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLI 536
+ ++ M + N Y + I+G C++ D A++L++ + + + TF +++
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 537 SGYSNSGQIDEAFGLTTEMK 556
+ + ++ +AF + +++
Sbjct: 294 ASLCSKKELRKAFAILEDLQ 313
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 40/335 (11%)
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
MV+ G P V T+ TL++G G + ++L L D MVE G P Y +I+ L + GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
E A +LS M + HI Y + + LC++G+ A L +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTE--------------- 101
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
M +G+ PDV T + +ID C+ G A +L MI+
Sbjct: 102 --------------------MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAF 549
P++ +++ IN L K A+ + ++ +R + T T+N++I G+ ++++A
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 550 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
+ M S S + VT++TLIN CK + E+ M +GI + +TYTTLI F
Sbjct: 202 RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+ + L + MI GV P+ T+ +++
Sbjct: 262 CQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 147/295 (49%), Gaps = 7/295 (2%)
Query: 124 IAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNF 183
+ L L++ +++E +Q + + L + +G TE A +++ ++ V +N
Sbjct: 27 LQALALVDRMVEEGHQPYGTIINGLCK----MGDTESALNLLSKMEETHIKAHVVIYNAI 82
Query: 184 LSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGT 243
+ L + L+ M G +V T++ I + C+ R +A ++ M++
Sbjct: 83 IDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 244 FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 303
P+VV+F+ +I+ K G + A ++ M L G ++P +++YNS+I+GFCK+ L
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDM-LRRG--IFPTTITYNSMIDGFCKQDRLND 199
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A+ +L M P V T++TLI+GY + ++ + + EM RG+ N V Y ++++
Sbjct: 200 AKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 259
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
+ GD++ A +L+ MI + P+ ++ + LC L +A + + K
Sbjct: 260 GFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 5/225 (2%)
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
D + L+N +C M+ G P T+I+G CK+G+TE AL L
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 542
+ M + + ++ IYN+ I+ LCK A+NL E+ + + D T++ +I + S
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
G+ +A L +M ++ + VT++ LIN L K G EA+E+ M+ +GI P ITY
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
++I F K+ + + D M K PD T+ ++ + A
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 87 LFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFD 146
+FP + S + + RW T+A L+R++I ++ I P + F
Sbjct: 107 IFPDVITYSGMIDSFCRSGRW-TDAEQLLRDMIERQ-INPDVV--------------TFS 150
Query: 147 ALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSF 206
AL+ A + G A ++ ++ RG + +N+ + + + ++ R+ M S
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
+V TF+ I CK RV + + M + G N V++ +I G C+ G LD A
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
+ +N+M + V PN +++ S++ C K L A +L D+ K+
Sbjct: 271 QDL---LNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 208/449 (46%), Gaps = 12/449 (2%)
Query: 175 VSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITV 234
+S+H+ + + L +D L K M G + + T N + LCK + +A +
Sbjct: 121 LSIHS--SIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGL 178
Query: 235 IYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIING 294
+ M + G PN VS+N +I G C ++D AL + MN + PN V+ N I++
Sbjct: 179 VREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKY---GIRPNRVTCNIIVHA 235
Query: 295 FCKKGGL-----LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
C+KG + L EE+L D +A + L+D + G++ ++L + EM ++
Sbjct: 236 LCQKGVIGNNNKKLLEEIL-DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK 294
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
+ + VVYN I+ L G+M A + DM+ + + PD ++Y L LC+ G EA
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
LH + + D S +++ +C SM+ L P+V VIDG
Sbjct: 355 CDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LD 528
+ G+T AL + N M+ +PN+ N+ I+G K A + +E+R K+ D
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
TT+N L+ G + AF L EM G + +TY L+ LC G ++A+ L+
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 534
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEE 617
+ GI D + + L + + P E
Sbjct: 535 RIQATGITIDHVPFLILAKKYTRLQRPGE 563
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 192/407 (47%), Gaps = 8/407 (1%)
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
L+ + G E A ++ E+R G + ++N + L VN++D+ L+ M +G
Sbjct: 162 LLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYG 221
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN----VVSFNMIIDGACKTGSL 263
N T N+ ++ALC++ + + + D + N +V +++D K G++
Sbjct: 222 IRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNV 281
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
AL+V K+M + +V +SV YN II G C G ++ A + DMVK G P V TY
Sbjct: 282 VQALEVWKEM---SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTY 338
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
TLI + G +E+ L M G+ P+ + Y I+ L HGD+ A++ L M+
Sbjct: 339 NTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLK 398
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ P+ + ++ +G R G + AL + N +L + + + ++ N L++ K
Sbjct: 399 SSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID 458
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
M + + PD T ++ C LG+ A +LY+ M++ QP++ Y +
Sbjct: 459 AWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVR 518
Query: 504 GLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 549
GLC A++L+ ++ + +D F L Y+ + EA+
Sbjct: 519 GLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 228/473 (48%), Gaps = 19/473 (4%)
Query: 182 NFLSHLVEVNDIDRFWRLYKGM---GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
N L ++++ + +DR L + + SF + + ++ + + LC + ++ A+ + +M
Sbjct: 89 NVLDYILK-SSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKM 147
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
+ G P +++ N +++G CK G ++ A ++++M M + PN VSYN++I G C
Sbjct: 148 IYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPS---PNCVSYNTLIKGLCSV 204
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL-EESLRLCDEMVE--RGLFP-N 354
+ A + M K G P+ T ++ + G + + +L +E+++ + P +
Sbjct: 205 NNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLD 264
Query: 355 IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN 414
IV+ ++ +++G++ +A +V +M K++ D Y ++ GLC +G + A
Sbjct: 265 IVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC 324
Query: 415 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 474
++K + D F+ N L++ +CK G+M G+ PD + +I G C G
Sbjct: 325 DMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 475 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFN 533
+ +A M+K P + ++N I+G + T A ++++ + + + T N
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNN 444
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
LI GY G++ +A+ + EM+S + + TYN L+ C G A +L M+ +
Sbjct: 445 ALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRR 504
Query: 594 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
G +PD ITYT L+ K ++ +L + G+ D PFL+
Sbjct: 505 GCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDH-------VPFLI 550
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 129/279 (46%), Gaps = 6/279 (2%)
Query: 127 LELLEALMDESYQHCPA---VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNF 183
++ LE + S ++ PA V++ ++R G AY +C++ RG V +N
Sbjct: 282 VQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTL 341
Query: 184 LSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGT 243
+S L + D L+ M + G + ++ + I LC V A + MLK
Sbjct: 342 ISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSL 401
Query: 244 FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 303
P V+ +N++IDG + G AL V +NLM V PN + N++I+G+ K G L+
Sbjct: 402 LPEVLLWNVVIDGYGRYGDTSSALSV---LNLMLSYGVKPNVYTNNALIHGYVKGGRLID 458
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A V +M P TY L+ G L + +L DEM+ RG P+I+ Y ++
Sbjct: 459 AWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVR 518
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 402
L G +++A +LS + I D + IL + R
Sbjct: 519 GLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTR 557
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 104/268 (38%), Gaps = 42/268 (15%)
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD--VYTKATVIDGNCKLGNT 476
+D ED ++ +L+YI KS T+ D + ++++ C G
Sbjct: 78 YDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKL 137
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTL 535
+ AL L MI P L +N +NGLCK + A LV E+R+ + ++NTL
Sbjct: 138 DAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTL 197
Query: 536 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC-------------------- 575
I G + +D+A L M G+ NRVT N +++ LC
Sbjct: 198 IKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSS 257
Query: 576 -------------------KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 616
KNG +A E+ K M + + D + Y +I +
Sbjct: 258 QANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMV 317
Query: 617 EVIALHDYMILKGVIPDQKTYDAIVTPF 644
M+ +GV PD TY+ +++
Sbjct: 318 AAYGFMCDMVKRGVNPDVFTYNTLISAL 345
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 210/473 (44%), Gaps = 13/473 (2%)
Query: 161 AYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY 220
A+D++ +L + +N LS L DI R L M +V T + I
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 221 ALCKECRVVEAITVIYRM----LKDGTF--PNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
LCK RV EA+ V +M DG + + FN +IDG CK G L A +++ +M
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
L PN+V+YN +I+G+C+ G L A+EV+ M + +P+V T T++ G R
Sbjct: 398 L--EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
L ++ +M + G+ N+V Y ++++ ++E+A M++ PD Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
L GLC+ +A+++ ++ + D + N+L+ C M
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G PD T T+I K + E R+ M + P +T Y + I+ C + D A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 515 KNLVDELRKRKLLDATT--FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
L ++ ++ T +N LI+ +S G +A L EMK + N TYN L
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Query: 573 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
L + E +LM M+ Q P+ IT L+ + +E++ L +M
Sbjct: 696 CLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS---GSDELVKLRKFM 745
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 207/436 (47%), Gaps = 12/436 (2%)
Query: 215 FNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
FN + L + + ++ +M + P+VV+ ++I+ CK+ +D AL+V ++M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 275 ---LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM-VKAGFEPSVRTYATLIDGY 330
GN + +S+ +N++I+G CK G L AEE+L M ++ P+ TY LIDGY
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
R G LE + + M E + PN+V N+I+ + RH + A DM + + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
+Y L C + +A+ + ++L+ DA L++ +C+
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
+ G D+ +I C N EK + M K ++P+ YN+ I+ K
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 511 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA----NRV 565
+ + +++++R+ L TT+ +I Y + G++DEA L K +GL + N V
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL---FKDMGLHSKVNPNTV 653
Query: 566 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
YN LIN K G +A L + M M+ +RP+ TY L N+K E ++ L D M
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Query: 626 ILKGVIPDQKTYDAIV 641
+ + P+Q T + ++
Sbjct: 714 VEQSCEPNQITMEILM 729
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 201/448 (44%), Gaps = 11/448 (2%)
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRML-KDGTFP-NVVSFNMIIDGACKTGSLD 264
+++N N+ + L + V +A V+ ML K+ FP N ++ ++++ K L
Sbjct: 180 SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLL- 238
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
K++ ++ + + V PNSV I+ CK A ++L D++K +
Sbjct: 239 TEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFN 298
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
L+ R + L +M E + P++V ++ L + ++EA +V M K
Sbjct: 299 ALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGK 358
Query: 385 H------ICPDQYSYAILTEGLCRNGYLTEALKLHNQI-LKFDLIEDAFSLNILLNYICK 437
I D + L +GLC+ G L EA +L ++ L+ + +A + N L++ C+
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCR 418
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
+ M + P+V T T++ G C+ A+ + M K + N+
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 556
Y + I+ C +++ + A +++ + DA + LISG + +A + ++K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 616
G S + + YN LI L C E+ E++ M +G +PD ITY TLI+ F K E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 617 EVIALHDYMILKGVIPDQKTYDAIVTPF 644
V + + M G+ P TY A++ +
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAY 626
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 4/273 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
++ L+ + G E A +V+ ++ +V N + + + ++ + M
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G NV T+ I+A C V +A+ +ML+ G P+ + +I G C+
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A++V++K+ G S+ + ++YN +I FC K E+L DM K G +P TY
Sbjct: 529 DAIRVVEKLK-EGGFSL--DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM-ID 383
TLI + + E R+ ++M E GL P + Y +++ G+++EA K+ DM +
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLH 645
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
+ P+ Y IL + G +AL L ++
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 10/217 (4%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
++ AL+ QV A V+ +L+ G + + A+N + + N+ ++ + + M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G + T+N I K ++ +M +DG P V ++ +ID C G L
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG----GLLLAEEVLGDMVKAGFEPS 319
D ALK+ K M L + V PN+V YN +IN F K G L L EE+ MV+ P+
Sbjct: 633 DEALKLFKDMGLHS--KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR----PN 686
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 356
V TY L E L+L DEMVE+ PN +
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQI 723
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 8/174 (4%)
Query: 158 TEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
E Y+++ ++ G +N +S + D + R+ + M G V T+
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 218 AIYALCKECRVVEAITVIYRM-LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
I A C + EA+ + M L PN V +N++I+ K G+ AL + ++M +
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM- 680
Query: 277 TGNSVWPNSVSYNSIINGFCKK--GGLLLAEEVLGDMVKAGFEPSVRTYATLID 328
V PN +YN++ +K G LL +++ +MV+ EP+ T L++
Sbjct: 681 --KMVRPNVETYNALFKCLNEKTQGETLL--KLMDEMVEQSCEPNQITMEILME 730
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/602 (23%), Positives = 268/602 (44%), Gaps = 32/602 (5%)
Query: 57 KLTTFMVNRVVSEFHNSPHLALDFYNWVGMLFPH----SLHSSCTLLQVLVNSRWFTEAL 112
KLT + R+++ + P+LAL F L H ++++ TL+++L +
Sbjct: 53 KLTQHGLQRLLNSTRDDPNLALSFLRQ---LKEHGVSPNVNAYATLVRILTTWGLDIKLD 109
Query: 113 SLMRNLIAKE--GIAPLELLEALMDESYQHCPA-----VFDALVRACTQVGATEGAYDVI 165
S++ LI E G ++L+E + +++ + + V ALV+A +G + A DV+
Sbjct: 110 SVLVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVL 169
Query: 166 CELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKE 225
+ + C+V + A N ++ + E I L+K + G N T+ + + ALC++
Sbjct: 170 FQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRK 229
Query: 226 CRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM---NLMTGNSVW 282
+ EA ++ +V + I+G C TG + A+ ++ ++ + G+ +
Sbjct: 230 GNLEEAAMLLIEN------ESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDL- 282
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 342
++ GFC + + AE V+ +M + GF V +ID Y + +L E+L
Sbjct: 283 --RAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGF 340
Query: 343 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 402
D+M+ +GL N V+ + IL + EA + + D +I D+ Y + + L +
Sbjct: 341 LDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSK 400
Query: 403 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 462
G + EA +L ++ ++ D + L++ C MI G+ PD+ T
Sbjct: 401 LGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
++ G + G+ E+ L +Y M +PN + I GLC A++ L
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE 520
Query: 523 KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 582
++ + +F + GY +G +A+ ++ + Y L LC G E+
Sbjct: 521 QKCPENKASF---VKGYCEAGLSKKAYKAFVRLE---YPLRKSVYIKLFFSLCIEGYLEK 574
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
A +++K M + P +I F K ++ E L D M+ +G+IPD TY ++
Sbjct: 575 AHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIH 634
Query: 643 PF 644
+
Sbjct: 635 TY 636
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 211/482 (43%), Gaps = 52/482 (10%)
Query: 215 FNLAIYA-------LCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
F L +YA CK + EA+ + +ML G N V ++I+ CK +D+ L
Sbjct: 314 FGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK---MDMCL 370
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
+ ++K +++ + V YN + K G + A E+L +M G P V Y TLI
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLI 430
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
DGY G + ++L L DEM+ G+ P+++ YN ++ L R+G EE ++ M +
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQI---------------LKFDLIEDAFSLNILL 432
P+ + +++ EGLC + EA + + + L + A+ + L
Sbjct: 491 PNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRL 550
Query: 433 NY-------------ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
Y +C M + P +I CKL N +A
Sbjct: 551 EYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREA 610
Query: 480 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISG 538
L++ M++ P+L Y I+ C++ A++L +++++R + D T+ L+
Sbjct: 611 QVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDR 670
Query: 539 Y-----------SNSGQIDE--AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
Y S G++ + A + E + G+ + V Y LI+ CK E+A E
Sbjct: 671 YLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAE 730
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
L MI G+ PD + YTTLI+ + +K + + + L + K IP + A+ + L
Sbjct: 731 LFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAAL 790
Query: 646 LA 647
A
Sbjct: 791 KA 792
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 171/426 (40%), Gaps = 67/426 (15%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
FDAL +++G E A++++ E++ RG + V + + + L M
Sbjct: 395 FDAL----SKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G ++ T+N+ + L + E + + RM +G PN V+ ++II+G C
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC------ 504
Query: 265 LALKVMKKMNLMTG-NSVWPNSVSYNSIINGFCK-------------------------- 297
A KV + + + P + + S + G+C+
Sbjct: 505 FARKVKEAEDFFSSLEQKCPENKA--SFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKL 562
Query: 298 ------KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
+G L A +VL M EP +I + + ++ E+ L D MVERGL
Sbjct: 563 FFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGL 622
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
P++ Y +++ R ++++A + DM + I PD +Y +L + YL +
Sbjct: 623 IPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL-----DRYLKLDPE 677
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 471
H + + +L + G+ DV +ID C
Sbjct: 678 HHETCSVQGEVGKRKASEVLREF-----------------SAAGIGLDVVCYTVLIDRQC 720
Query: 472 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT 531
K+ N E+A L++ MI +P++ Y + I+ + D+A LV EL K+ + + +
Sbjct: 721 KMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSES 780
Query: 532 FNTLIS 537
F +
Sbjct: 781 FEAAVK 786
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 139 QHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWR 198
Q CP + V+ + G ++ AY +R L F S +E +++
Sbjct: 521 QKCPENKASFVKGYCEAGLSKKAYKAF--VRLEYPLRKSVYIKLFFSLCIE-GYLEKAHD 577
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
+ K M ++ + I A CK V EA + M++ G P++ ++ ++I C
Sbjct: 578 VLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC 637
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK-------------KGGLLLAE 305
+ L A + + M + P+ V+Y +++ + K + G A
Sbjct: 638 RLNELQKAESLFEDMK---QRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKAS 694
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
EVL + AG V Y LID + +LE++ L D M++ GL P++V Y +++
Sbjct: 695 EVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSY 754
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQ 390
+R G ++ A +++++ K+ P +
Sbjct: 755 FRKGYIDMAVTLVTELSKKYNIPSE 779
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 202/447 (45%), Gaps = 3/447 (0%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
LY G G N +T++ ++ L + R + + + L++ P N+ ID
Sbjct: 70 LYAGKSHPGFTHNYDTYHSILFKLSR-ARAFDPVESLMADLRNSYPPIKCGENLFIDLLR 128
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA-GFE 317
G M+ + V + S N+++N + L + + ++ G
Sbjct: 129 NYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGIT 188
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
P++ T L+ + +E + ++ DE+ GL PN+V Y +IL GDME A +V
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
L +M+D+ PD +Y +L +G C+ G +EA + + + K ++ + + +++ +CK
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
M+ R PD VID C+ ++A L+ M+K + P+ +
Sbjct: 309 EKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 368
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
++ I+ LCK A+ L DE K + T+NTLI+G G++ EA L +M
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
N TYN LI L KNG +E +++ M+ G P+ T+ L K E+
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEED 488
Query: 618 VIALHDYMILKGVIPDQKTYDAIVTPF 644
+ + ++ G + D+++++ + F
Sbjct: 489 AMKIVSMAVMNGKV-DKESWELFLKKF 514
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 164/360 (45%), Gaps = 57/360 (15%)
Query: 90 HSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVF--DA 147
S+ S TLL VL+ ++ F ++ +N ES+ P +F +
Sbjct: 153 RSVRSLNTLLNVLIQNQRFDLVHAMFKN----------------SKESFGITPNIFTCNL 196
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
LV+A + E AY V+ E+ + G + ++ + L V D++ R+ + M G
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNM--------------- 252
+ T+ + + CK R EA TV+ M K+ PN V++ +
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 253 --------------------IIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII 292
+ID C+ +D A + +K M N+ P++ +++I
Sbjct: 317 NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRK---MLKNNCMPDNALLSTLI 373
Query: 293 NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 352
+ CK+G + A ++ D + G PS+ TY TLI G G L E+ RL D+M ER
Sbjct: 374 HWLCKEGRVTEARKLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCK 432
Query: 353 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 412
PN YN ++ L ++G+++E +VL +M++ P++ ++ IL EGL + G +A+K+
Sbjct: 433 PNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKG 202
A+ L+ + G A + E +G + S+ +N ++ + E ++ RL+
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M N T+N+ I L K V E + V+ ML+ G FPN +F ++ +G K G
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Query: 263 LDLALKVMKKMNLMTG 278
+ A+K++ M +M G
Sbjct: 486 EEDAMKIV-SMAVMNG 500
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 179/358 (50%), Gaps = 2/358 (0%)
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
+++I+ + G + +A+ + G+ +V ++ LI Y R G EE++ + + M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 349 RGLFPNIVVYNSILYWLYRHG-DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
GL PN+V YN+++ + G + ++ +K +M + PD+ ++ L R G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
A L +++ + +D FS N LL+ ICK M + + P+V + +TVI
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
DG K G ++AL L+ M + + YN+ ++ K+ ++ A +++ E+ +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 528 -DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
D T+N L+ GY G+ DE + TEMK + N +TY+TLI+ K G +EA E+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 587 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+ G+R D + Y+ LI K ++L D M +G+ P+ TY++I+ F
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 187/396 (47%), Gaps = 42/396 (10%)
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTG 278
I L + +V A + G V +F+ +I ++G + A+ V N M
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVF---NSMKE 296
Query: 279 NSVWPNSVSYNSIINGFCKKGGLLLAE--EVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
+ PN V+YN++I+ C KGG+ + + +M + G +P T+ +L+ +R G
Sbjct: 297 YGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
E + L DEM R + ++ YN++L + + G M+ A ++L+ M K I P+ SY+ +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 456
+G + G EAL L ++ + D S N LL+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS----------------------- 452
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 516
+YTK +G +E+AL + M + + ++ YN+ + G K D K
Sbjct: 453 ---IYTK---------VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 517 LVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
+ E+++ +L + T++TLI GYS G EA + E KS GL A+ V Y+ LI+ LC
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 611
KNG A L+ M +GI P+ +TY ++I F +
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 200/432 (46%), Gaps = 26/432 (6%)
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
R+++ + G+ V F+ I A + EAI+V M + G PN+V++N +ID A
Sbjct: 254 RIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID-A 312
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD-MVKAGF 316
C G ++ +V K + M N V P+ +++NS++ C +GGL A L D M
Sbjct: 313 CGKGGMEFK-QVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRI 370
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
E V +Y TL+D + G ++ + + +M + + PN+V Y++++ + G +EA
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 436
+ +M I D+ SY L + G EAL + ++ + +D + N LL
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
K M + P++ T +T+IDG K G ++A+ ++ + ++
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 497 IYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF----GL 551
+Y++ I+ LCK A +L+DE+ K + + T+N++I + S +D + G
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGG 610
Query: 552 TTEMKSLGLSA------NRV-----TYNTLINLLCKNGCDEEAKEL------MKMMIMQG 594
+ S LSA NRV T N C+E +EL + M
Sbjct: 611 SLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLE 670
Query: 595 IRPDCITYTTLI 606
I+P+ +T++ ++
Sbjct: 671 IKPNVVTFSAIL 682
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 204/468 (43%), Gaps = 31/468 (6%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL- 187
+ E Y + F AL+ A + G E A V ++ G ++ +N +
Sbjct: 255 IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG 314
Query: 188 ---VEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIY-RMLKDGT 243
+E + +F + M G + TFN ++ A+C + EA ++ M
Sbjct: 315 KGGMEFKQVAKF---FDEMQRNGVQPDRITFN-SLLAVCSRGGLWEAARNLFDEMTNRRI 370
Query: 244 FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 303
+V S+N ++D CK G +DLA +++ +M + + PN VSY+++I+GF K G
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPV---KRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A + G+M G +Y TL+ Y + G EE+L + EM G+ ++V YN++L
Sbjct: 428 ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
+ G +E KV ++M +H+ P+ +Y+ L +G + G EA+++ + L
Sbjct: 488 GYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
D + L++ +CK+ M G+ P+V T ++ID + +++
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYS 607
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAK---NLVDELRKRKLLDATTFNTLISGYS 540
NG +L +S ++ L + V + L E R D G
Sbjct: 608 NG-------GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCE------EGMQ 654
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
I E F +M L + N VT++ ++N + E+A L++
Sbjct: 655 ELSCILEVF---RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLE 699
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/516 (24%), Positives = 231/516 (44%), Gaps = 41/516 (7%)
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
++ E + + + ++AL+ + + A V+ E+ G S+ +N+ +S
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 188 VEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNV 247
+D L M G +V T+ + + +V A+++ M G PN+
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
+FN I G +K+ ++N+ + P+ V++N+++ F + G V
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVC---GLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
+M +AGF P T+ TLI Y+R GS E+++ + M++ G+ P++ YN++L L R
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
G E++ KVL++M D P++ +Y L NG E +H+ L E+ +S
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NG--KEIGLMHS------LAEEVYS 587
Query: 428 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV-IDGNCKLGNTEKALRLYNGM 486
I P V K V + C L +A R ++ +
Sbjct: 588 GVIE-------------------------PRAVLLKTLVLVCSKCDL--LPEAERAFSEL 620
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQI 545
+ P++T NS ++ + A ++D +++R + T+N+L+ +S S
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
++ + E+ + G+ + ++YNT+I C+N +A + M GI PD ITY T
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
I + EE I + YMI G P+Q TY++IV
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 234/504 (46%), Gaps = 11/504 (2%)
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKG 202
+V ++ + G A ++ L+ G + V+++ + +S ++K
Sbjct: 174 SVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAIT-VIYRMLKDGTFPNVVSFNMIIDGACKTG 261
M G + T+N+ + K IT ++ +M DG P+ ++N +I CK G
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRG 292
Query: 262 SL-DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 320
SL A +V ++M G S + V+YN++++ + K A +VL +MV GF PS+
Sbjct: 293 SLHQEAAQVFEEMK-AAGFSY--DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
TY +LI YAR G L+E++ L ++M E+G P++ Y ++L R G +E A + +
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 440
M + P+ ++ + G TE +K+ ++I L D + N LL ++
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 441 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 500
M G P+ T T+I + G+ E+A+ +Y M+ P+L+ YN+
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 501 FINGLCKMASTDVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 559
+ L + + ++ ++ E+ R + T+ +L+ Y+N +I L E+ S
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 560 LSANRVTYNTLINLLCKNGCD--EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
+ V TL+ L+C CD EA+ + +G PD T ++++ + ++ +
Sbjct: 590 IEPRAVLLKTLV-LVCSK-CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 618 VIALHDYMILKGVIPDQKTYDAIV 641
+ DYM +G P TY++++
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLM 671
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 181/386 (46%), Gaps = 12/386 (3%)
Query: 263 LDLALKV----MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
DLAL+ MK+ + S+ NSV II+ K+G + A + + + GF
Sbjct: 151 FDLALRAFDWFMKQKDY---QSMLDNSV-VAIIISMLGKEGRVSSAANMFNGLQEDGFSL 206
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG-DMEEASKV 377
V +Y +LI +A G E++ + +M E G P ++ YN IL + G + + +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYL-TEALKLHNQILKFDLIEDAFSLNILLNYIC 436
+ M I PD Y+Y L C+ G L EA ++ ++ D + N LL+
Sbjct: 267 VEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
KS M+ G P + T ++I + G ++A+ L N M + +P++
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 497 IYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEM 555
Y + ++G + + A ++ +E+R + TFN I Y N G+ E + E+
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 556 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 615
GLS + VT+NTL+ + +NG D E + K M G P+ T+ TLI+ +++
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 616 EEVIALHDYMILKGVIPDQKTYDAIV 641
E+ + ++ M+ GV PD TY+ ++
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVL 531
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 193/460 (41%), Gaps = 33/460 (7%)
Query: 88 FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAP--------------------- 126
F S+ + +L+ EA+ L +N +A++G P
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMEL-KNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
+ + E + + + F+A ++ G + E+ G + WN L+
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
+ ++K M G V TFN I A + +A+TV RML G P+
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFC--KKGGLL-- 302
+ ++N ++ + G + + KV+ +M PN ++Y S+++ + K+ GL+
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEME---DGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 303 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
LAEEV ++ EP TL+ ++ L E+ R E+ ERG P+I NS++
Sbjct: 581 LAEEVYSGVI----EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
R + +A+ VL M ++ P +Y L R+ ++ ++ +IL +
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
D S N ++ C++ M G+ PDV T T I E+A+ +
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
MIK +PN YNS ++G CK+ D AK V++LR
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 2/195 (1%)
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST-DV 513
G DVY+ ++I G +A+ ++ M + +P L YN +N KM + +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 514 AKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
+LV++++ + DA T+NTLI+ EA + EMK+ G S ++VTYN L++
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 573 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
+ K+ +EA +++ M++ G P +TY +LI+ + + +E + L + M KG P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 633 DQKTYDAIVTPFLLA 647
D TY +++ F A
Sbjct: 383 DVFTYTTLLSGFERA 397
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 500 SFINGLCKMASTDVAKNLVDELRKRK----LLDATTFNTLISGYSNSGQIDEAFGLTTEM 555
+F+ GL D+A D K+K +LD + +IS G++ A + +
Sbjct: 140 AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGL 199
Query: 556 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 615
+ G S + +Y +LI+ +G EA + K M G +P ITY ++ F K P
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP 259
Query: 616 -EEVIALHDYMILKGVIPDQKTYDAIVT 642
++ +L + M G+ PD TY+ ++T
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLIT 287
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 204/436 (46%), Gaps = 4/436 (0%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
N + + IYA C+ C + A ++ M ++G + ++ ++DG L V
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
K++ P V+Y +IN + K G + A EV M + G + +++TY+ +I+G+
Sbjct: 473 KRLKEC---GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
+ + + ++MV+ G+ P++++YN+I+ G+M+ A + + +M P
Sbjct: 530 VKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTT 589
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
++ + G ++G + +L++ + + + + + N L+N + +
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDE 649
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M G+ + +T ++ G +G+T KA + + ++ Y + + CK
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 511 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
A + E+ R + ++ +N LI G++ G + EA L +MK G+ + TY +
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTS 769
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
I+ K G A + ++ M G++P+ TYTTLI + + PE+ ++ ++ M G
Sbjct: 770 FISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMG 829
Query: 630 VIPDQKTYDAIVTPFL 645
+ PD+ Y ++T L
Sbjct: 830 IKPDKAVYHCLLTSLL 845
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 199/442 (45%), Gaps = 4/442 (0%)
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKG 202
+++ ++ A Q E A ++ E+ G + ++ + V D + ++K
Sbjct: 415 SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
+ G V T+ I K ++ +A+ V M ++G N+ +++M+I+G K
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKD 534
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
A V + M + P+ + YN+II+ FC G + A + + +M K P+ RT
Sbjct: 535 WANAFAVFEDM---VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
+ +I GYA+ G + SL + D M G P + +N ++ L ME+A ++L +M
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
+ ++++Y + +G G +A + ++ L D F+ LL CKS
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M R +P + + +IDG + G+ +A L M K +P++ Y SFI
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 503 NGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+ K + A ++E+ + + T+ TLI G++ + ++A EMK++G+
Sbjct: 772 SACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 562 ANRVTYNTLINLLCKNGCDEEA 583
++ Y+ L+ L EA
Sbjct: 832 PDKAVYHCLLTSLLSRASIAEA 853
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 216/490 (44%), Gaps = 23/490 (4%)
Query: 107 WFTEALSLMRNL---------IAKEGIAPLELLEAL---MDESYQHCP-AVFDALVRACT 153
WF EA + + L A +E EAL M+E P A++ ++ T
Sbjct: 401 WFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYT 460
Query: 154 QVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVN 213
V + V L+ G +V + ++ +V I + + + M G N+
Sbjct: 461 MVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLK 520
Query: 214 TFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM 273
T+++ I K A V M+K+G P+V+ +N II C G++D A++ +K+M
Sbjct: 521 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
Query: 274 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 333
+ P + ++ II+G+ K G + + EV M + G P+V T+ LI+G
Sbjct: 581 QKLRHR---PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK 637
Query: 334 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 393
+E+++ + DEM G+ N Y I+ GD +A + + + ++ + D ++Y
Sbjct: 638 RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 394 AILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 453
L + C++G + AL + ++ ++ ++F NIL++ + M
Sbjct: 698 EALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 454 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 513
G+ PD++T + I K G+ +A + M + +PN+ Y + I G + + +
Sbjct: 758 EGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 817
Query: 514 AKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF---GLTT---EMKSLGLSANRVT 566
A + +E++ + D ++ L++ + I EA+ G+ T EM GL + T
Sbjct: 818 ALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 877
Query: 567 YNTLINLLCK 576
LCK
Sbjct: 878 AVHWSKCLCK 887
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 160/366 (43%), Gaps = 4/366 (1%)
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
P+ F +++ + G + A + ++M + P S Y S+I+ + + A
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMR---ARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
+ M + G E S+ TY+ ++ G+++ G E + DE N +Y I+Y
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
+ +ME A ++ +M ++ I Y + +G + L + ++ +
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
+ L+N K M G+ ++ T + +I+G KL + A ++
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK-RKLLDATTFNTLISGYSNSG 543
M+K +P++ +YN+ I+ C M + D A V E++K R TF +I GY+ SG
Sbjct: 544 DMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
+ + + M+ G T+N LIN L + E+A E++ M + G+ + TYT
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 604 TLITHF 609
++ +
Sbjct: 664 KIMQGY 669
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 145/364 (39%), Gaps = 36/364 (9%)
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
+PS + ++ Y R G + + + M RG+ P +Y S+++ DM+EA
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNG-------YLTEALKLHN--------------- 414
+ M ++ I +Y+++ G + G + EA ++H
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 415 --------QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-----GLPPDVY 461
+ L ++ E+ I + + G ++ + G P V
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
T +I+ K+G KAL + M + + NL Y+ ING K+ A + +++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 522 RKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
K + D +N +IS + G +D A EM+ L T+ +I+ K+G
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
+ E+ MM G P T+ LI +K E+ + + D M L GV ++ TY I
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Query: 641 VTPF 644
+ +
Sbjct: 666 MQGY 669
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 1/196 (0%)
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M RG+ P ++I + ++AL M + + +L Y+ + G K
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 511 TDVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
+ A DE ++ K L+A+ + +I + + ++ A L EM+ G+ A Y+T
Sbjct: 395 AEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHT 454
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
+++ +++ + K + G P +TY LI + K + + + M +G
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 630 VIPDQKTYDAIVTPFL 645
V + KTY ++ F+
Sbjct: 515 VKHNLKTYSMMINGFV 530
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 248/540 (45%), Gaps = 40/540 (7%)
Query: 74 PHLALDFYNWVGML-FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEA 132
P L F++WV F H S +L+ L +R L++ RN + +E
Sbjct: 81 PADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRAR----NLNVARNFLFS--------IER 128
Query: 133 LMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVND 192
+ + F++L+R+ G + + + ++ G SV +N+ LS L++
Sbjct: 129 RSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGR 188
Query: 193 IDRFWRLYKGMG-SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF----PNV 247
L+ M ++G + TFN I CK V EA +R+ KD P+V
Sbjct: 189 TGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEA----FRIFKDMELYHCNPDV 244
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
V++N IIDG C+ G + +A V+ M L V PN VSY +++ G+C K + A V
Sbjct: 245 VTYNTIIDGLCRAGKVKIAHNVLSGM-LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLV 303
Query: 308 LGDMVKAGFEPSVRTYATLIDGYA---RWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
DM+ G +P+ TY TLI G + R+ +++ L ++ P+ +N ++
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFT-TFAPDACTFNILIKA 362
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI-- 422
G ++ A KV +M++ + PD SY++L LC A L N++ + +++
Sbjct: 363 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG 422
Query: 423 ED-----AFSLNILLNYICKSXXXXXXXXXXGSMITRGL--PPDVYTKATVIDGNCKLGN 475
+D A + N + Y+C + ++ RG+ PP + T+I G+C+ G
Sbjct: 423 KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPP---SYKTLITGHCREGK 479
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNT 534
+ A L M++ + P+L Y I+GL K+ +A + + LR L ATTF++
Sbjct: 480 FKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHS 539
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 594
+++ + +E+F L T M + N ++ LL + E+A +++++ G
Sbjct: 540 VLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNG 599
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 205/477 (42%), Gaps = 51/477 (10%)
Query: 167 ELRTRGCL-VSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKE 225
E R+ GC+ + +N+ + +L++ M G +V TFN + L K
Sbjct: 127 ERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR 186
Query: 226 CRVVEAITVIYRMLKD-GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPN 284
R A + M + G P+ +FN +I+G CK +D A ++ K M L N P+
Sbjct: 187 GRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCN---PD 243
Query: 285 SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE--PSVRTYATLIDGYARWGSLEESLRL 342
V+YN+II+G C+ G + +A VL M+K + P+V +Y TL+ GY ++E++ +
Sbjct: 244 VVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLV 303
Query: 343 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH--ICPDQYSYAILTEGL 400
+M+ RGL PN V YN+++ L +E +L D PD ++ IL +
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAH 363
Query: 401 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 460
C G+L A+K+ + M+ L PD
Sbjct: 364 CDAGHLDAAMKVFQE-----------------------------------MLNMKLHPDS 388
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKM------DE-QPNLTIYNSFINGLCKMASTDV 513
+ + +I C ++A L+N + + DE +P YN LC T
Sbjct: 389 ASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQ 448
Query: 514 AKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
A+ + +L KR + D ++ TLI+G+ G+ A+ L M + TY LI+
Sbjct: 449 AEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDG 508
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 630
L K G A + ++ M+ P T+ +++ K+ E L M+ K +
Sbjct: 509 LLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRI 565
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 132/583 (22%), Positives = 225/583 (38%), Gaps = 99/583 (16%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVG 156
+L++ N+ F E++ L + + + GI+P L F++L+ + G
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTM-KQMGISPSVL--------------TFNSLLSILLKRG 187
Query: 157 ATEGAYDVICELR-TRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
T A+D+ E+R T G + +N ++ + + +D +R++K M + +V T+
Sbjct: 188 RTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTY 247
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGT--FPNVVSFNMIIDGACKTGSLDLALKVMKKM 273
N I LC+ +V A V+ MLK T PNVVS+ ++ G C +D A+ V M
Sbjct: 248 NTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM 307
Query: 274 NLMTGNSVWPNSVSYNSIINGF-------------------------------------C 296
+ PN+V+YN++I G C
Sbjct: 308 ---LSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHC 364
Query: 297 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF---- 352
G L A +V +M+ P +Y+ LI + + L +E+ E+ +
Sbjct: 365 DAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKD 424
Query: 353 ---PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
P YN + +L +G ++A KV ++ + + D SY L G CR G A
Sbjct: 425 ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPA 483
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
+L +L+ + + D + +L++ + K M+ P T +V+
Sbjct: 484 YELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAE 543
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV----------- 518
K ++ L M++ + N+ + + L A + A +V
Sbjct: 544 LAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVK 603
Query: 519 -DEL-----RKRKLLDATTF----------------NTLISGYSNSGQIDEAFGLTTEMK 556
+EL RKLLDA T NT+I G + EAF L E+
Sbjct: 604 MEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELV 663
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
LG + L N L G EE + + K M DC
Sbjct: 664 ELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATLRESDDC 706
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 6/244 (2%)
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI-TRGLPPDVYT 462
G E++KL + + + + N LL+ + K M T G+ PD YT
Sbjct: 152 GLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYT 211
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
T+I+G CK ++A R++ M P++ YN+ I+GLC+ +A N++ +
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 523 KRKL---LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 579
K+ + ++ TL+ GY +IDEA + +M S GL N VTYNTLI L +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 580 DEEAKELM--KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
+E K+++ PD T+ LI H + + + M+ + PD +Y
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 638 DAIV 641
++
Sbjct: 392 SVLI 395
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 505 LCKMASTDVAKNLVDELRKR-----KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 559
L + + +VA+N + + +R KL D FN+LI Y N+G E+ L MK +G
Sbjct: 110 LGRARNLNVARNFLFSIERRSNGCVKLQD-RYFNSLIRSYGNAGLFQESVKLFQTMKQMG 168
Query: 560 LSANRVTYNTLINLLCKNGCDEEAKELM-KMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
+S + +T+N+L+++L K G A +L +M G+ PD T+ TLI F K +E
Sbjct: 169 ISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEA 228
Query: 619 IALHDYMILKGVIPDQKTYDAIV 641
+ M L PD TY+ I+
Sbjct: 229 FRIFKDMELYHCNPDVVTYNTII 251
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 190/399 (47%), Gaps = 7/399 (1%)
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
F+++ID + +++ALK+ K++ ++P+ S++ + GL LA E +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQF---GIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
M+ G + + I Y G ++ L M G+ P+IV + + L + G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
++EA+ VL + I D S + + +G C+ G EA+KL I F L + F +
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYS 377
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
L+ IC + + GL PD T+IDG C LG T+KA + + ++K
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA 548
P+LT I + S A+++ ++ L LD T+N L+ GY + Q+++
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
F L EM+S G+S + TYN LI+ + G +EA E++ +I +G P + +T +I
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 609 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
F+K+ +E L YM + PD T A++ + A
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 178/405 (43%), Gaps = 7/405 (1%)
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
ML G N ++ I C G D +++ M + P+ V++ I+ CK
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMK---HYGIRPDIVAFTVFIDKLCK 318
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
G L A VL + G + +++IDG+ + G EE+++L R PNI V
Sbjct: 319 AGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFV 375
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
Y+S L + GDM AS + ++ + + PD Y + +G C G +A + +L
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
K + IL+ + +M T GL DV T ++ G K
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLI 536
K L + M P++ YN I+ + D A ++ EL +R + +T F +I
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
G+S G EAF L M L + + VT + L++ CK E+A L ++ G++
Sbjct: 556 GGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
PD + Y TLI + E+ L M+ +G++P++ T+ A+V
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 194/426 (45%), Gaps = 7/426 (1%)
Query: 147 ALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSF 206
+L++ +V E A + + + +RG ++ + F+ D+ W L GM +
Sbjct: 241 SLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY 300
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
G ++ F + I LCK + EA +V++++ G + VS + +IDG CK G + A
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
+K++ L PN Y+S ++ C G +L A + ++ + G P Y T+
Sbjct: 361 IKLIHSFRLR------PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTM 414
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
IDGY G +++ + +++ G P++ ++ R G + +A V +M + +
Sbjct: 415 IDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 446
D +Y L G + L + +L +++ + D + NIL++ +
Sbjct: 475 KLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANE 534
Query: 447 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 506
+I RG P VI G K G+ ++A L+ M + +P++ ++ ++G C
Sbjct: 535 IISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 507 KMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 565
K + A L ++L L D +NTLI GY + G I++A L M G+ N
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 566 TYNTLI 571
T++ L+
Sbjct: 655 THHALV 660
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 200/429 (46%), Gaps = 8/429 (1%)
Query: 112 LSLMRNLIAKEGIA-PLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRT 170
+SL++ ++ G+ E +E ++ AV +R G + ++++ ++
Sbjct: 240 ISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH 299
Query: 171 RGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVE 230
G + A+ F+ L + + + + FG ++ + + I CK + E
Sbjct: 300 YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEE 359
Query: 231 AITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNS 290
AI +I+ PN+ ++ + C TG + A + +++ + + P+ V Y +
Sbjct: 360 AIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFEL---GLLPDCVCYTT 413
Query: 291 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
+I+G+C G A + G ++K+G PS+ T LI +R+GS+ ++ + M G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
L ++V YN++++ + + + +++ +M I PD +Y IL + GY+ EA
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
++ +++++ + + ++ K M + PDV T + ++ G
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DA 529
CK EKA+ L+N ++ +P++ +YN+ I+G C + + A L+ + +R +L +
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Query: 530 TTFNTLISG 538
+T + L+ G
Sbjct: 654 STHHALVLG 662
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 148/306 (48%), Gaps = 5/306 (1%)
Query: 201 KGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKT 260
K + SF N+ ++ + +C ++ A T+ + + G P+ V + +IDG C
Sbjct: 362 KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421
Query: 261 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK-GGLLLAEEVLGDMVKAGFEPS 319
G D A + + L +GN P S++ ++I+ G C + G + AE V +M G +
Sbjct: 422 GRTDKAFQYFGAL-LKSGN---PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
V TY L+ GY + L + L DEM G+ P++ YN +++ + G ++EA++++S
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
++I + P ++ + G + G EA L + + D + + LL+ CK+
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
++ GL PDV T+I G C +G+ EKA L M++ PN + ++
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 500 SFINGL 505
+ + GL
Sbjct: 658 ALVLGL 663
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
L+ AC++ G+ A V ++T G + V +NN + + + +++ + L M S G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
+V T+N+ I+++ + EA +I +++ G P+ ++F +I G K G A
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
+ M + + P+ V+ +++++G+CK + A + ++ AG +P V Y TLI
Sbjct: 569 ILWFYMADL---RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
GY G +E++ L MV+RG+ PN +++++ L
Sbjct: 626 HGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 190/399 (47%), Gaps = 7/399 (1%)
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
F+++ID + +++ALK+ K++ ++P+ S++ + GL LA E +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQF---GIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
M+ G + + I Y G ++ L M G+ P+IV + + L + G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
++EA+ VL + I D S + + +G C+ G EA+KL I F L + F +
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYS 377
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
L+ IC + + GL PD T+IDG C LG T+KA + + ++K
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA 548
P+LT I + S A+++ ++ L LD T+N L+ GY + Q+++
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
F L EM+S G+S + TYN LI+ + G +EA E++ +I +G P + +T +I
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 609 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
F+K+ +E L YM + PD T A++ + A
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 178/405 (43%), Gaps = 7/405 (1%)
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
ML G N ++ I C G D +++ M + P+ V++ I+ CK
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMK---HYGIRPDIVAFTVFIDKLCK 318
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
G L A VL + G + +++IDG+ + G EE+++L R PNI V
Sbjct: 319 AGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFV 375
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
Y+S L + GDM AS + ++ + + PD Y + +G C G +A + +L
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
K + IL+ + +M T GL DV T ++ G K
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLI 536
K L + M P++ YN I+ + D A ++ EL +R + +T F +I
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
G+S G EAF L M L + + VT + L++ CK E+A L ++ G++
Sbjct: 556 GGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
PD + Y TLI + E+ L M+ +G++P++ T+ A+V
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 194/426 (45%), Gaps = 7/426 (1%)
Query: 147 ALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSF 206
+L++ +V E A + + + +RG ++ + F+ D+ W L GM +
Sbjct: 241 SLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY 300
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
G ++ F + I LCK + EA +V++++ G + VS + +IDG CK G + A
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
+K++ L PN Y+S ++ C G +L A + ++ + G P Y T+
Sbjct: 361 IKLIHSFRLR------PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTM 414
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
IDGY G +++ + +++ G P++ ++ R G + +A V +M + +
Sbjct: 415 IDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 446
D +Y L G + L + +L +++ + D + NIL++ +
Sbjct: 475 KLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANE 534
Query: 447 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 506
+I RG P VI G K G+ ++A L+ M + +P++ ++ ++G C
Sbjct: 535 IISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 507 KMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 565
K + A L ++L L D +NTLI GY + G I++A L M G+ N
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 566 TYNTLI 571
T++ L+
Sbjct: 655 THHALV 660
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 200/429 (46%), Gaps = 8/429 (1%)
Query: 112 LSLMRNLIAKEGIA-PLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRT 170
+SL++ ++ G+ E +E ++ AV +R G + ++++ ++
Sbjct: 240 ISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH 299
Query: 171 RGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVE 230
G + A+ F+ L + + + + FG ++ + + I CK + E
Sbjct: 300 YGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEE 359
Query: 231 AITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNS 290
AI +I+ PN+ ++ + C TG + A + +++ + + P+ V Y +
Sbjct: 360 AIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFEL---GLLPDCVCYTT 413
Query: 291 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
+I+G+C G A + G ++K+G PS+ T LI +R+GS+ ++ + M G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
L ++V YN++++ + + + +++ +M I PD +Y IL + GY+ EA
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
++ +++++ + + ++ K M + PDV T + ++ G
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DA 529
CK EKA+ L+N ++ +P++ +YN+ I+G C + + A L+ + +R +L +
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Query: 530 TTFNTLISG 538
+T + L+ G
Sbjct: 654 STHHALVLG 662
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 148/306 (48%), Gaps = 5/306 (1%)
Query: 201 KGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKT 260
K + SF N+ ++ + +C ++ A T+ + + G P+ V + +IDG C
Sbjct: 362 KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL 421
Query: 261 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK-GGLLLAEEVLGDMVKAGFEPS 319
G D A + + L +GN P S++ ++I+ G C + G + AE V +M G +
Sbjct: 422 GRTDKAFQYFGAL-LKSGN---PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
V TY L+ GY + L + L DEM G+ P++ YN +++ + G ++EA++++S
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
++I + P ++ + G + G EA L + + D + + LL+ CK+
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
++ GL PDV T+I G C +G+ EKA L M++ PN + ++
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 500 SFINGL 505
+ + GL
Sbjct: 658 ALVLGL 663
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
L+ AC++ G+ A V ++T G + V +NN + + + +++ + L M S G
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
+V T+N+ I+++ + EA +I +++ G P+ ++F +I G K G A
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
+ M + + P+ V+ +++++G+CK + A + ++ AG +P V Y TLI
Sbjct: 569 ILWFYMADL---RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
GY G +E++ L MV+RG+ PN +++++ L
Sbjct: 626 HGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 204/443 (46%), Gaps = 6/443 (1%)
Query: 202 GMGSFGHV--ENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACK 259
G+ S G + + T N ++ LC ++ +A ++ M + P+ S + ++ G +
Sbjct: 92 GLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLAR 151
Query: 260 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 319
LD A+ +++ M +M+G P++++YN II CKKG + A +L DM +G P
Sbjct: 152 IDQLDKAMCILRVM-VMSGG--VPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPD 208
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
V TY T+I +G+ E+++R + ++ G P ++ Y ++ + R+ A +VL
Sbjct: 209 VITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLE 268
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
DM + PD +Y L CR G L E + IL L + + N LL+ +C
Sbjct: 269 DMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE 328
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
M P V T +I+G CK +A+ + M++ P++ YN
Sbjct: 329 YWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYN 388
Query: 500 SFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
+ + + K D A L+ L+ T+N++I G + G + +A L +M
Sbjct: 389 TVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDA 448
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
G+ + +T +LI C+ EEA +++K +G TY +I KK E
Sbjct: 449 GIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMA 508
Query: 619 IALHDYMILKGVIPDQKTYDAIV 641
I + + M+ G PD+ Y AIV
Sbjct: 509 IEVVEIMLTGGCKPDETIYTAIV 531
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 193/428 (45%), Gaps = 37/428 (8%)
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
+ +N + L ++ +D+ + + M G V + T+N+ I LCK+ + A+ ++ M
Sbjct: 141 SCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM 200
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
G+ P+V+++N +I G+ + A++ K N P ++Y ++ C+
Sbjct: 201 SLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ---LQNGCPPFMITYTVLVELVCRY 257
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
G A EVL DM G P + TY +L++ R G+LEE + ++ GL N V Y
Sbjct: 258 CGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTY 317
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
N++L+ L H +E ++L+ M CP +Y IL GLC+ L+ A+ Q+L+
Sbjct: 318 NTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLE 377
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
+ D + N +L + K G + PP + T +VIDG K G +K
Sbjct: 378 QKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKK 437
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISG 538
AL LY+ M+ P+ S I G C+ NLV+E
Sbjct: 438 ALELYHQMLDAGIFPDDITRRSLIYGFCR-------ANLVEE------------------ 472
Query: 539 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 598
+GQ+ E + G TY +I LCK E A E++++M+ G +PD
Sbjct: 473 ---AGQV------LKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Query: 599 CITYTTLI 606
YT ++
Sbjct: 524 ETIYTAIV 531
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 157/317 (49%), Gaps = 10/317 (3%)
Query: 195 RFWR--LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNM 252
RFW+ L G F + T+ + + +C+ C AI V+ M +G +P++V++N
Sbjct: 230 RFWKDQLQNGCPPF-----MITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 253 IIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 312
+++ C+ G+L+ V++ + + + N+V+YN++++ C EE+L M
Sbjct: 285 LVNYNCRRGNLEEVASVIQH---ILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMY 341
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ + P+V TY LI+G + L ++ +M+E+ P+IV YN++L + + G ++
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
+A ++L + + P +Y + +GL + G + +AL+L++Q+L + D + L+
Sbjct: 402 DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
C++ RG T VI G CK E A+ + M+ +
Sbjct: 462 YGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCK 521
Query: 493 PNLTIYNSFINGLCKMA 509
P+ TIY + + G+ +M
Sbjct: 522 PDETIYTAIVKGVEEMG 538
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 177/398 (44%), Gaps = 39/398 (9%)
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
N I+ C G L A K+++ +M ++ P+ S ++++ G + L A +L
Sbjct: 108 NEILHNLCSNGKLTDACKLVE---VMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRV 164
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
MV +G P TY +I + G + +L L ++M G P+++ YN+++ ++ +G+
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
E+A + D + P +Y +L E +CR Y A + +++ED
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCR--YCGSARAI-------EVLED------ 269
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
M G PD+ T ++++ NC+ GN E+ + ++
Sbjct: 270 --------------------MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG 309
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAF 549
+ N YN+ ++ LC D + +++ + + T+N LI+G + + A
Sbjct: 310 LELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAI 369
Query: 550 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
+M + VTYNT++ + K G ++A EL+ ++ P ITY ++I
Sbjct: 370 DFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGL 429
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
KK ++ + L+ M+ G+ PD T +++ F A
Sbjct: 430 AKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRA 467
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 140/281 (49%), Gaps = 6/281 (2%)
Query: 135 DESYQHCPA---VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVN 191
D+ CP + LV + + A +V+ ++ GC + +N+ +++
Sbjct: 234 DQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRG 293
Query: 192 DIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFN 251
+++ + + + S G N T+N +++LC E ++ M + P V+++N
Sbjct: 294 NLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYN 353
Query: 252 MIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 311
++I+G CK L A+ + M P+ V+YN+++ K+G + A E+LG +
Sbjct: 354 ILINGLCKARLLSRAIDFFYQ---MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLL 410
Query: 312 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 371
P + TY ++IDG A+ G ++++L L +M++ G+FP+ + S++Y R +
Sbjct: 411 KNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLV 470
Query: 372 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 412
EEA +VL + ++ +Y ++ +GLC+ + A+++
Sbjct: 471 EEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEV 511
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 6/284 (2%)
Query: 130 LEALMDESYQHC-PAV--FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
+E L D + + C P + +++LV + G E VI + + G ++ +N L
Sbjct: 264 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 323
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
L D + M + V T+N+ I LCK + AI Y+ML+ P+
Sbjct: 324 LCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 383
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
+V++N ++ K G +D A+++ + L+ P ++YNS+I+G KKG + A E
Sbjct: 384 IVTYNTVLGAMSKEGMVDDAIEL---LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALE 440
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ M+ AG P T +LI G+ R +EE+ ++ E RG Y ++ L
Sbjct: 441 LYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLC 500
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
+ ++E A +V+ M+ PD+ Y + +G+ G +EA+
Sbjct: 501 KKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 199/421 (47%), Gaps = 12/421 (2%)
Query: 215 FNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
FN + L + + ++ +M + P+VV+ ++I+ CK+ +D AL+V ++M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 275 ---LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM-VKAGFEPSVRTYATLIDGY 330
GN + +S+ +N++I+G CK G L AEE+L M ++ P+ TY LIDGY
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
R G LE + + M E + PN+V N+I+ + RH + A DM + + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
+Y L C + +A+ + ++L+ DA L++ +C+
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
+ G D+ +I C N EK + M K ++P+ YN+ I+ K
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 511 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA----NRV 565
+ + +++++R+ L TT+ +I Y + G++DEA L K +GL + N V
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL---FKDMGLHSKVNPNTV 653
Query: 566 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
YN LIN K G +A L + M M+ +RP+ TY L N+K E ++ L D M
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Query: 626 I 626
+
Sbjct: 714 V 714
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 195/439 (44%), Gaps = 10/439 (2%)
Query: 161 AYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY 220
A+D++ +L + +N LS L DI R L M +V T + I
Sbjct: 278 AWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILIN 337
Query: 221 ALCKECRVVEAITVIYRM----LKDGTF--PNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
LCK RV EA+ V +M DG + + FN +IDG CK G L A +++ +M
Sbjct: 338 TLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
L PN+V+YN +I+G+C+ G L A+EV+ M + +P+V T T++ G R
Sbjct: 398 L--EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
L ++ +M + G+ N+V Y ++++ ++E+A M++ PD Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
L GLC+ +A+++ ++ + D + N+L+ C M
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKE 575
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G PD T T+I K + E R+ M + P +T Y + I+ C + D A
Sbjct: 576 GKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEA 635
Query: 515 KNLVDELRKRKLLDATT--FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
L ++ ++ T +N LI+ +S G +A L EMK + N TYN L
Sbjct: 636 LKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFK 695
Query: 573 LLCKNGCDEEAKELMKMMI 591
L + E +LM M+
Sbjct: 696 CLNEKTQGETLLKLMDEMV 714
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 140/563 (24%), Positives = 240/563 (42%), Gaps = 57/563 (10%)
Query: 106 RWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVI 165
RWF R + + + E L++ M S Q V D L+R G + A+ V+
Sbjct: 160 RWFG------RMGMVNQSVLVYERLDSNMKNS-QVRNVVVDVLLRN----GLVDDAFKVL 208
Query: 166 CELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWR-----------LYKGMGSFGHVENVNT 214
E+ + SV N + +V + W+ L S G N
Sbjct: 209 DEMLQKE---SVFPPNRITADIV----LHEVWKERLLTEEKIIALISRFSSHGVSPNSVW 261
Query: 215 FNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
I +LCK R A ++ ++K+ T FN ++ +C ++D++ +MN
Sbjct: 262 LTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL--SCLGRNMDIS-----RMN 314
Query: 275 ----LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL----------GDMVKAGFEPSV 320
M + P+ V+ +IN CK + A EV G+++KA S+
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKAD---SI 371
Query: 321 RTYATLIDGYARWGSLEESLRLCDEM-VERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
+ TLIDG + G L+E+ L M +E PN V YN ++ R G +E A +V+S
Sbjct: 372 H-FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
M + I P+ + + G+CR+ L A+ + K + + + L++ C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
M+ G PD +I G C++ A+R+ + + +L YN
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 500 SFINGLC-KMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
I C K + V + L D ++ K D+ T+NTLIS + + + +M+
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMK-MMIMQGIRPDCITYTTLITHFNKKHHPEE 617
GL TY +I+ C G +EA +L K M + + P+ + Y LI F+K + +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 618 VIALHDYMILKGVIPDQKTYDAI 640
++L + M +K V P+ +TY+A+
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNAL 693
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 208/444 (46%), Gaps = 18/444 (4%)
Query: 214 TFNLAIYALCKECRVVEA--ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMK 271
T ++ ++ + KE + E I +I R G PN V I CK + A ++
Sbjct: 224 TADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILS 283
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
+LM N + +N++++ + + +++ M + P V T LI+
Sbjct: 284 --DLMK-NKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 332 RWGSLEESLRLCDEMVERG--------LFPNIVVYNSILYWLYRHGDMEEASKVLSDM-I 382
+ ++E+L + ++M RG + + + +N+++ L + G ++EA ++L M +
Sbjct: 341 KSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
++ P+ +Y L +G CR G L A ++ +++ + ++ + ++N ++ +C+
Sbjct: 399 EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLN 458
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M G+ +V T T+I C + N EKA+ Y M++ P+ IY + I
Sbjct: 459 MAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 503 NGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+GLC++ A +V++L++ LD +N LI + + ++ + + T+M+ G
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
+ +TYNTLI+ K+ E + +M+ M G+ P TY +I + +E + L
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 622 HDYMILKGVI-PDQKTYDAIVTPF 644
M L + P+ Y+ ++ F
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAF 662
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 201/448 (44%), Gaps = 11/448 (2%)
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRML-KDGTFP-NVVSFNMIIDGACKTGSLD 264
+++N N+ + L + V +A V+ ML K+ FP N ++ ++++ K L
Sbjct: 180 SNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLL- 238
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
K++ ++ + + V PNSV I+ CK A ++L D++K +
Sbjct: 239 TEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFN 298
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
L+ R + L +M E + P++V ++ L + ++EA +V M K
Sbjct: 299 ALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGK 358
Query: 385 H------ICPDQYSYAILTEGLCRNGYLTEALKLHNQI-LKFDLIEDAFSLNILLNYICK 437
I D + L +GLC+ G L EA +L ++ L+ + +A + N L++ C+
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCR 418
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
+ M + P+V T T++ G C+ A+ + M K + N+
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 556
Y + I+ C +++ + A +++ + DA + LISG + +A + ++K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 616
G S + + YN LI L C E+ E++ M +G +PD ITY TLI+ F K E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 617 EVIALHDYMILKGVIPDQKTYDAIVTPF 644
V + + M G+ P TY A++ +
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAY 626
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 117/230 (50%), Gaps = 4/230 (1%)
Query: 190 VNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVS 249
V+++++ Y+ M G + + I LC+ R +AI V+ ++ + G ++++
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
+NM+I C + A KV + + M P+S++YN++I+ F K E ++
Sbjct: 549 YNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM-VERGLFPNIVVYNSILYWLYRH 368
M + G +P+V TY +ID Y G L+E+L+L +M + + PN V+YN ++ +
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
G+ +A + +M K + P+ +Y L + L LKL +++++
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
++ AL+ QV A V+ +L+ G + + A+N + + N+ ++ + + M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G + T+N I K ++ +M +DG P V ++ +ID C G L
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG----GLLLAEEVLGDMVKAGFEPS 319
D ALK+ K M L + V PN+V YN +IN F K G L L EE+ MV+ P+
Sbjct: 633 DEALKLFKDMGLHS--KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR----PN 686
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVE 348
V TY L E L+L DEMVE
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 109/238 (45%), Gaps = 4/238 (1%)
Query: 147 ALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSF 206
L+ AC V E A ++ GC + +S L +V R+ + +
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
G ++ +N+ I C + + ++ M K+G P+ +++N +I K +
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM-VKAGFEPSVRTYAT 325
++M++M + + P +Y ++I+ +C G L A ++ DM + + P+ Y
Sbjct: 601 ERMMEQMR---EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
LI+ +++ G+ ++L L +EM + + PN+ YN++ L E K++ +M++
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 217/500 (43%), Gaps = 46/500 (9%)
Query: 137 SYQHCPAVFDALVRACTQVGATEGAYDVICE-LRTRGCLVSVHAWNNFLSHLVEVNDIDR 195
+Y H FD +V ++ + D I E L+ GC + + L + D+
Sbjct: 67 NYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDK 126
Query: 196 FWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIID 255
+Y GM SFG V N N+ + K VV I+ ++ F N SF++ +
Sbjct: 127 AIEVYTGMSSFGFVPNTRAMNMMMDVNFK-LNVVNGALEIFEGIR---FRNFFSFDIALS 182
Query: 256 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 315
C G + V + M G +PN + I+ C+ G + A +V+G M+ +G
Sbjct: 183 HFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSG 242
Query: 316 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI-------------- 361
SV ++ L+ G+ R G ++++ L ++M++ G PN+V Y S+
Sbjct: 243 ISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAF 302
Query: 362 ---------------------LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
++ R G EEA KV + + + + PDQY++A + L
Sbjct: 303 TVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSL 362
Query: 401 CRNGYLTEALKLHNQI-LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 459
C +G ++ + I FDL+ N+L N K M + D
Sbjct: 363 CLSGKFDLVPRITHGIGTDFDLVTG----NLLSNCFSKIGYNSYALKVLSIMSYKDFALD 418
Query: 460 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 519
YT + C+ G A+++Y +IK + + +++ I+ L ++ + A +L
Sbjct: 419 CYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFK 478
Query: 520 E-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
+ ++ LD ++ I G + +I+EA+ L +MK G+ NR TY T+I+ LCK
Sbjct: 479 RCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEK 538
Query: 579 CDEEAKELMKMMIMQGIRPD 598
E+ +++++ I +G+ D
Sbjct: 539 ETEKVRKILRECIQEGVELD 558
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 153/392 (39%), Gaps = 41/392 (10%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
+L+ ++ E + F ++R C + G A+ V+ + G VSV+ W+ +S
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ + L+ M G N+ T+ I V EA TV+ ++ +G P++V
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
N++I + G + A KV + + P+ ++ SI++ C G L +
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLE---KRKLVPDQYTFASILSSLCLSGKFDLVPRIT 375
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
+ G + + T L + +++ G YNS
Sbjct: 376 HGI---GTDFDLVTGNLLSNCFSKIG-----------------------YNSY------- 402
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
A KVLS M K D Y+Y + LCR G A+K++ I+K DA
Sbjct: 403 -----ALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFH 457
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
+ +++ + + I P DV + I G + E+A L M +
Sbjct: 458 SAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKE 517
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 520
PN Y + I+GLCK T+ + ++ E
Sbjct: 518 GGIYPNRRTYRTIISGLCKEKETEKVRKILRE 549
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 163/411 (39%), Gaps = 83/411 (20%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
+AI V M G PN + NM++D K ++ AL++ + + + N S++
Sbjct: 126 KAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIR-------FRNFFSFD 178
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
++ FC +GG GD+V + M+
Sbjct: 179 IALSHFCSRGGR-------GDLVGVKI-------------------------VLKRMIGE 206
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G +PN + IL R G + EA +V+ MI I +++L G R+G +A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
+ L N+ MI G P++ T ++I G
Sbjct: 267 VDLFNK-----------------------------------MIQIGCSPNLVTYTSLIKG 291
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-D 528
LG ++A + + + P++ + N I+ ++ + A+ + L KRKL+ D
Sbjct: 292 FVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPD 351
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
TF +++S SG+ D +T +G + VT N L N K G + A +++
Sbjct: 352 QYTFASILSSLCLSGKFDLVPRIT---HGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLS 408
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 639
+M + DC TYT ++ + P I ++ K +I ++K DA
Sbjct: 409 IMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMY-----KIIIKEKKHLDA 454
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 536
+KA+ +Y GM PN N ++ K+ + A + + +R R +F+ +
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFF---SFDIAL 181
Query: 537 SGYSNSGQIDEAFGLTTEMKSL---GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
S + + G + G+ +K + G NR + ++ L C+ GC EA +++ +MI
Sbjct: 182 SHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS 241
Query: 594 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
GI ++ L++ F + P++ + L + MI G P+ TY +++ F+
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFV 293
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 61/121 (50%)
Query: 527 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
+ ++ L+SG+ SG+ +A L +M +G S N VTY +LI G +EA +
Sbjct: 245 VSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTV 304
Query: 587 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
+ + +G+ PD + +I + + EE + + + ++PDQ T+ +I++ L
Sbjct: 305 LSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCL 364
Query: 647 A 647
+
Sbjct: 365 S 365
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/533 (23%), Positives = 225/533 (42%), Gaps = 45/533 (8%)
Query: 120 AKEGI--APLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSV 177
A+EG+ E L Y+ ++AL++ + G A V+ E+ C
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351
Query: 178 HAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYR 237
+N ++ V + + M G + N T+ I A K + EA+ + Y
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
M + G PN ++N ++ G + +++K + M N PN ++N+++
Sbjct: 412 MKEAGCVPNTCTYNAVLS---LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN 468
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
KG V +M GFEP T+ TLI Y R GS ++ ++ EM G +
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 528
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
YN++L L R GD V+SDM K P + SY+++ + + G ++ N+I
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 418 KFDLIEDAFSLNILL--NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+ + L LL N+ C++ L
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRA----------------------------------LAG 614
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNT 534
+E+A L+ K +P++ I+NS ++ + D A+ +++ +R+ L D T+N+
Sbjct: 615 SERAFTLFK---KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 594
L+ Y G+ +A + ++ L + V+YNT+I C+ G +EA ++ M +G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 595 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
IRP TY T ++ + E+ + + M P++ T+ +V + A
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRA 784
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/559 (23%), Positives = 245/559 (43%), Gaps = 50/559 (8%)
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
+LL+ + + Y + ++ A ++ G E A D+ ++ G ++ +N L
Sbjct: 196 KLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVF 255
Query: 188 VEVNDIDRFWRLYKG----MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGT 243
+ R WR G M S G + T + + A +E + EA + G
Sbjct: 256 ---GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY 312
Query: 244 FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 303
P V++N ++ K G AL V+K+M NS +SV+YN ++ + + G
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEME---ENSCPADSVTYNELVAAYVRAGFSKE 369
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A V+ M K G P+ TY T+ID Y + G +E+L+L M E G PN YN++L
Sbjct: 370 AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 364 WLYRHGDMEEASKVLSDM-----------------------IDKHI---------C---P 388
L + E K+L DM +DK + C P
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 448
D+ ++ L R G +A K++ ++ + + N LLN + +
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI--NGLC 506
M ++G P + + ++ K GN R+ N + + P+ + + + N C
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609
Query: 507 K-MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 565
+ +A ++ A L + + D FN+++S ++ + D+A G+ ++ GLS + V
Sbjct: 610 RALAGSERAFTLFKKHGYKP--DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLV 667
Query: 566 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
TYN+L+++ + G +A+E++K + ++PD ++Y T+I F ++ +E + + M
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 626 ILKGVIPDQKTYDAIVTPF 644
+G+ P TY+ V+ +
Sbjct: 728 TERGIRPCIFTYNTFVSGY 746
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 198/481 (41%), Gaps = 60/481 (12%)
Query: 98 LLQVLVNSRWFTEALSLMR----NLIAKEGIAPLELLEALMDESYQHCPA---------- 143
LLQV + +TEALS+++ N + + EL+ A + + A
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 144 ------VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFW 197
+ ++ A + G + A + ++ GC+ + +N LS L + + +
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF-PNVVSFNMIIDG 256
++ M S G N T+N + ALC + + + ++R +K F P+ +FN +I
Sbjct: 442 KMLCDMKSNGCSPNRATWN-TMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 257 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 316
+ GS A K+ +M N+ +YN+++N +KG E V+ DM GF
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNAC---VTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP----------------------- 353
+P+ +Y+ ++ YA+ G+ R+ + + E +FP
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 354 ------------NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 401
++V++NS+L R+ ++A +L + + + PD +Y L +
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 402 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 461
R G +A ++ + K L D S N ++ C+ M RG+ P ++
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
T T + G +G + + M K D +PN + ++G C+ A + V ++
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Query: 522 R 522
+
Sbjct: 798 K 798
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 144/298 (48%), Gaps = 11/298 (3%)
Query: 138 YQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVND---ID 194
+ C ++AL+ A + G +VI +++++G + +++ L + + I+
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 195 RFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKD-GTFPNVVSFNMI 253
R K F + T LA + +CR + + + K G P++V FN +
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANF----KCRALAGSERAFTLFKKHGYKPDMVIFNSM 637
Query: 254 IDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 313
+ + D A +++ + + + P+ V+YNS+++ + ++G AEE+L + K
Sbjct: 638 LSIFTRNNMYDQAEGILESIR---EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694
Query: 314 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 373
+ +P + +Y T+I G+ R G ++E++R+ EM ERG+ P I YN+ + G E
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754
Query: 374 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
V+ M P++ ++ ++ +G CR G +EA+ ++I FD D S+ L
Sbjct: 755 IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRL 812
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 211/480 (43%), Gaps = 59/480 (12%)
Query: 182 NFLSHLVEVNDI----DRFWRLYKGMGSFGHVENVNTFNLAIY-------ALCKECRVVE 230
NF+S +++ ++I D W + + + T NL Y AL K+ V+
Sbjct: 117 NFVSFVLKSDEIREKPDIAWSFF----CWSRKQKKYTHNLECYVSLVDVLALAKD---VD 169
Query: 231 AITVIYRMLKDGTFPNVVSF-NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
I + +K FP VS N +I K G ++ L V +KM N + P +YN
Sbjct: 170 RIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK---ENGIEPTLYTYN 226
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
++NG + AE V M +P + TY T+I GY + G ++++ +M R
Sbjct: 227 FLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR 286
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G + + Y +++ Y D + +M +K I ++++++ GLC+ G L E
Sbjct: 287 GHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG 346
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
+ +MI +G P+V +IDG
Sbjct: 347 YTVFE-----------------------------------NMIRKGSKPNVAIYTVLIDG 371
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LD 528
K G+ E A+RL + MI +P++ Y+ +NGLCK + A + R L ++
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
+ +++LI G +G++DEA L EM G + + YN LI+ K+ +EA L K
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 589 MM-IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
M +G TYT L++ K+H EE + L D MI KG+ P + A+ T L+
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/547 (23%), Positives = 237/547 (43%), Gaps = 23/547 (4%)
Query: 51 LEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWV--GMLFPHSLHSSCTLLQVLVNSRWF 108
L +LSP +F++ E P +A F+ W + H+L +L+ VL ++
Sbjct: 111 LIKLSPNFVSFVLKS--DEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAK-- 166
Query: 109 TEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICEL 168
+ R I E + + +AL+++ ++G E V ++
Sbjct: 167 ----DVDRIRFVSSEIKKFE---------FPMTVSAANALIKSFGKLGMVEELLWVWRKM 213
Query: 169 RTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRV 228
+ G +++ +N ++ LV +D R+++ M S ++ T+N I CK +
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQT 273
Query: 229 VEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY 288
+A+ + M G + +++ +I + + ++M+ G V P++ S
Sbjct: 274 QKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMD-EKGIQVPPHAFSL 332
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
+I G CK+G L V +M++ G +P+V Y LIDGYA+ GS+E+++RL M++
Sbjct: 333 --VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
G P++V Y+ ++ L ++G +EEA + + Y+ L +GL + G + E
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVI 467
A +L ++ + D++ N L++ K M G VYT ++
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
G K E+AL+L++ MI P + + GLC A ++DEL ++
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
+I+ +G+I EA L + G +IN L K G + A +LM
Sbjct: 571 LDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 630
Query: 588 KMMIMQG 594
I G
Sbjct: 631 HSKIGIG 637
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/596 (22%), Positives = 253/596 (42%), Gaps = 56/596 (9%)
Query: 50 ALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRW 107
ALE L K+ +V R + E ++ + F+ W G F H + TL++ L +R
Sbjct: 83 ALEVLKLKVDHRLV-RSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARL 141
Query: 108 FTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICE 167
+ E ++ ++ ++ PAV LV+A + A V +
Sbjct: 142 YGEMYRTIQEVVRNTYVSV--------------SPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
+ R C + +N+ + L++ ++ +Y M + G +C
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG-----------------DC- 229
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
FP+ ++++ +I K G D A+++ +M N + P
Sbjct: 230 ----------------FPDTITYSALISSYEKLGRNDSAIRLFDEMK---DNCMQPTEKI 270
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
Y +++ + K G + A ++ +M +AG P+V TY LI G + G ++E+ +M+
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN-GYL 406
GL P++V N+++ L + G +EE + V S+M P SY + + L + ++
Sbjct: 331 RDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV 390
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
+E +++ + F+ +IL++ CK+ M +G PP ++
Sbjct: 391 SEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-K 525
I+ K E A L+ + + + +Y I K A +L +E++ +
Sbjct: 451 INALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS 510
Query: 526 LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
D +N L+SG +G I+EA L +M+ G A+ ++N ++N + G A E
Sbjct: 511 GPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIE 570
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ + + GI+PD +TY TL+ F EE + M KG D TY +I+
Sbjct: 571 MFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 173/426 (40%), Gaps = 40/426 (9%)
Query: 261 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG--FEP 318
G + K + G P S +YNS+I ++G EV +M G F P
Sbjct: 173 GRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCF-P 231
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
TY+ LI Y + G + ++RL DEM + + P +Y ++L ++ G +E+A +
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK- 437
+M P Y+Y L +GL + G + EA + +L+ L D LN L+N + K
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 438 -----------------------------------SXXXXXXXXXXGSMITRGLPPDVYT 462
M + P +T
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
+ +IDG CK EKAL L M + P Y S IN L K + A L EL+
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 523 KR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
+ + + + +I + G++ EA L EMK+ G + YN L++ + K G
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 582 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
EA L++ M G R D ++ ++ F + P I + + + G+ PD TY+ ++
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL 591
Query: 642 TPFLLA 647
F A
Sbjct: 592 GCFAHA 597
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 164/389 (42%), Gaps = 42/389 (10%)
Query: 125 APLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFL 184
+ + L + + D Q ++ L+ +VG E A D+ E++ GC +V+ + +
Sbjct: 251 SAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 185 SHLVEVNDIDRFWRLYKGM-------------------GSFGHVEN-------------- 211
L + +D + YK M G G VE
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT 370
Query: 212 --VNTFNLAIYALCK-ECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALK 268
V ++N I AL + + V E + +M D P+ +++++IDG CKT ++ AL
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 269 VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 328
++++M+ P +Y S+IN K A E+ ++ + S R YA +I
Sbjct: 431 LLEEMD---EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 329 GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 388
+ + G L E++ L +EM +G P++ YN+++ + + G + EA+ +L M +
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 448
D S+ I+ G R G A+++ I + D + N LL +
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGNTE 477
M +G D T ++++D +GN +
Sbjct: 608 REMKDKGFEYDAITYSSILDA---VGNVD 633
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 181/385 (47%), Gaps = 6/385 (1%)
Query: 225 ECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPN 284
E + ++ + + ++ G PNV ++ CK L A++V++ LM + + P+
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIE---LMVSSGIIPD 140
Query: 285 SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD 344
+ +Y ++N CK+G + A +++ M G+ + TY L+ G GSL +SL+ +
Sbjct: 141 ASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVE 200
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
++++GL PN Y+ +L Y+ +EA K+L ++I K P+ SY +L G C+ G
Sbjct: 201 RLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEG 260
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
+A+ L ++ + S NILL +C M P V T
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI--YNSFINGLCKMASTDVAKNLVDELR 522
+I+ G TE+AL++ M K + Q +T YN I LCK D+ +DE+
Sbjct: 321 ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Query: 523 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
R+ + T+N + S ++ ++ EAF + + + Y ++I LC+ G
Sbjct: 381 YRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTF 440
Query: 582 EAKELMKMMIMQGIRPDCITYTTLI 606
A +L+ M G PD TY+ LI
Sbjct: 441 AAFQLLYEMTRCGFDPDAHTYSALI 465
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 214/460 (46%), Gaps = 14/460 (3%)
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
E N D F L + + + GH NV +Y LCK R+ +AI VI M+ G P+
Sbjct: 84 EPNLSDSFSHL-ESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDAS 142
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP-NSVSYNSIINGFCKKGGLLLAEEV 307
++ +++ CK G++ A+++++KM + +P N+V+YN+++ G C G L + +
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKME----DHGYPSNTVTYNALVRGLCMLGSLNQSLQF 198
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
+ +++ G P+ TY+ L++ + +E+++L DE++ +G PN+V YN +L +
Sbjct: 199 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 258
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
G ++A + ++ K + SY IL LC +G EA L ++ D +
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVT 318
Query: 428 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT---VIDGNCKLGNTEKALRLYN 484
NIL+N + M ++G T + VI CK G + ++ +
Sbjct: 319 YNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLD 377
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMAS-TDVAKNLVDEL-RKRKLLDATTFNTLISGYSNS 542
MI +PN YN+ I LC+ S A ++ L K+K + ++I+
Sbjct: 378 EMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRK 436
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM-IMQGIRPDCIT 601
G AF L EM G + TY+ LI LC G A E++ +M + +P
Sbjct: 437 GNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDN 496
Query: 602 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ +I K + + + + M+ K +P++ TY +V
Sbjct: 497 FNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILV 536
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 220/486 (45%), Gaps = 14/486 (2%)
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
L T G +V L L + N + + R+ + M S G + + + + + LCK
Sbjct: 97 LVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGN 156
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
V A+ ++ +M G N V++N ++ G C GSL+ +L+ ++++ + PN+ +
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL---MQKGLAPNAFT 213
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
Y+ ++ K+ G A ++L +++ G EP++ +Y L+ G+ + G ++++ L E+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+G N+V YN +L L G EEA+ +L++M P +Y IL L +G
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 408 EALKLHNQILK--FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK-- 463
+AL++ ++ K A S N ++ +CK MI R P+ T
Sbjct: 334 QALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA 393
Query: 464 -ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
++ + N K+ ++A + + + Y S I LC+ +T A L+ E+
Sbjct: 394 IGSLCEHNSKV---QEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMT 450
Query: 523 KRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK-SLGLSANRVTYNTLINLLCKNGCD 580
+ DA T++ LI G G A + + M+ S +N +I LCK
Sbjct: 451 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRT 510
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
+ A E+ +MM+ + P+ TY L+ + E + D + L+ VI Q D I
Sbjct: 511 DLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVI-GQNAVDRI 569
Query: 641 VTPFLL 646
V F L
Sbjct: 570 VMQFNL 575
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 200/452 (44%), Gaps = 10/452 (2%)
Query: 92 LHSSCTLLQVLVNSRWFTEA--LSLMRNLIAKEGIA--PLELLEALMDESYQHCPAVFDA 147
L + +++++V+S +A + + N + K G ++L+E + D Y ++A
Sbjct: 122 LKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNA 181
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
LVR +G+ + + L +G + ++ L + D +L + G
Sbjct: 182 LVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
N+ ++N+ + CKE R +A+ + + G NVVS+N+++ C G + A
Sbjct: 242 GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEAN 301
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG--FEPSVRTYAT 325
++ +M+ G P+ V+YN +IN G A +VL +M K F + +Y
Sbjct: 302 SLLAEMD---GGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNP 358
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
+I + G ++ ++ DEM+ R PN YN+I + ++EA ++ + +K
Sbjct: 359 VIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQ 418
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
C Y + LCR G A +L ++ + DA + + L+ +C
Sbjct: 419 KCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAM 478
Query: 446 XXXGSM-ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
M + P V +I G CK+ T+ A+ ++ M++ PN T Y + G
Sbjct: 479 EVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEG 538
Query: 505 LCKMASTDVAKNLVDELRKRKLLDATTFNTLI 536
+ ++AK ++DELR RK++ + ++
Sbjct: 539 IAHEDELELAKEVLDELRLRKVIGQNAVDRIV 570
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 34/195 (17%)
Query: 450 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 509
S++T G P+V ++ CK +KA+R+ M+ P+ + Y +N LCK
Sbjct: 96 SLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK-- 153
Query: 510 STDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
G + A L +M+ G +N VTYN
Sbjct: 154 --------------------------------RGNVGYAMQLVEKMEDHGYPSNTVTYNA 181
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
L+ LC G ++ + ++ ++ +G+ P+ TY+ L+ K+ +E + L D +I+KG
Sbjct: 182 LVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Query: 630 VIPDQKTYDAIVTPF 644
P+ +Y+ ++T F
Sbjct: 242 GEPNLVSYNVLLTGF 256
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 138/558 (24%), Positives = 253/558 (45%), Gaps = 68/558 (12%)
Query: 72 NSPHLALDFYNWVGMLFPHSLHSSCTLLQV-LVNSR-----WFTEALSLMRNLIAKE--- 122
NSP LA++F+ V L P+S + ++ L+ SR F S++ +++
Sbjct: 110 NSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHG 169
Query: 123 GIAPLELLEALMD--ESYQHC------------PAVFDALVRACTQVGATEGAYDVICEL 168
I+ + +L E Q C + L++A + A+DV CE+
Sbjct: 170 NISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEI 229
Query: 169 RTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRV 228
R G + + A+N L L + ++ ++++ M + T+ + I + + +
Sbjct: 230 RRGGHKLDIFAYNMLLDALAK---DEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKC 286
Query: 229 VEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY 288
EA+ + M+ +G NVV +N ++ K +D A++V +M + TG PN +Y
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM-VETG--CRPNEYTY 343
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
+ ++N LL+AE G +V+ +DG E+ +
Sbjct: 344 SLLLN-------LLVAE---GQLVR-------------LDGVV-------------EISK 367
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
R + I Y+ ++ L + G + EA ++ DM + ++ SY + E LC G E
Sbjct: 368 RYMTQGI--YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE 425
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A+++ ++I + ++ D N + + + K M G PD++T +I
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-L 527
++G ++A+ ++ + + D +P++ YNS IN L K D A E++++ L
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNP 545
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
D T++TL+ + + +++ A+ L EM G N VTYN L++ L KNG EA +L
Sbjct: 546 DVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLY 605
Query: 588 KMMIMQGIRPDCITYTTL 605
M QG+ PD ITYT L
Sbjct: 606 SKMKQQGLTPDSITYTVL 623
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 203/467 (43%), Gaps = 59/467 (12%)
Query: 233 TVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGN-------SVWPNS 285
+++ M+K N+ + N++I T L + L+++KK +L + + S
Sbjct: 157 SILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRS 216
Query: 286 VSYNSIINGFC--KKGG---------LLL--------AEEVLGDMVKAGFEPSVRTYATL 326
Y+ + +C ++GG +LL A +V DM K TY +
Sbjct: 217 RDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTYTIM 276
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
I R G +E++ L +EM+ GL N+V YN+++ L + +++A +V S M++
Sbjct: 277 IRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGC 336
Query: 387 CPDQYSYAIL------------------------TEG--------LCRNGYLTEALKLHN 414
P++Y+Y++L T+G L + G+++EA +L
Sbjct: 337 RPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFC 396
Query: 415 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 474
+ F + + S +L +C + + +G+ D TV KL
Sbjct: 397 DMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLK 456
Query: 475 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFN 533
L+ M K P++ YN I ++ D A N+ +EL + D ++N
Sbjct: 457 QISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYN 516
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
+LI+ +G +DEA EM+ GL+ + VTY+TL+ K E A L + M+++
Sbjct: 517 SLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK 576
Query: 594 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
G +P+ +TY L+ K E + L+ M +G+ PD TY +
Sbjct: 577 GCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 136/323 (42%), Gaps = 40/323 (12%)
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
TY L+ Y R ++ + E+ G +I YN +L L + E+A +V DM
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDM 261
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 441
+H D+Y+Y I+ + R G EA+ L N+++ L + N L+ + K
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAK---- 317
Query: 442 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 501
G M+ +KA+++++ M++ +PN Y+
Sbjct: 318 -------GKMV------------------------DKAIQVFSRMVETGCRPNEYTYSLL 346
Query: 502 INGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+N L V + V E+ KR + ++ L+ S G + EA L +M S +
Sbjct: 347 LNLLVAEGQL-VRLDGVVEISKRYMTQGI-YSYLVRTLSKLGHVSEAHRLFCDMWSFPVK 404
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
R +Y +++ LC G EA E++ + +G+ D + Y T+ + K + L
Sbjct: 405 GERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDL 464
Query: 622 HDYMILKGVIPDQKTYDAIVTPF 644
+ M G PD TY+ ++ F
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASF 487
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 146/646 (22%), Positives = 261/646 (40%), Gaps = 53/646 (8%)
Query: 42 HLKHRRWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWV-GMLFPHSLHSSCTLLQ 100
H + + + + +L V RV++ + P+LAL F + G + S+ + T+++
Sbjct: 39 HSEQVKEGTFDYKALELNDIGVLRVLNSMKDDPYLALSFLKRIEGNVTLPSVQAYATVIR 98
Query: 101 VL----VNSRWFTEALSLMRNLIAKEGIAPLELLEAL--MDESYQHCPAVFDALVRACTQ 154
++ ++ + T L+R G + ++LL+A+ M++S V ALV+A
Sbjct: 99 IVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYAN 158
Query: 155 VGATEGAYDVICE-LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVN 213
+ + A D+ + G + A N +S ++ D + + G + +
Sbjct: 159 LDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAH 218
Query: 214 TFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA---LKVM 270
T+ L + AL + E ++ R+L T V + I+G C D+A L+ +
Sbjct: 219 TYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPL 278
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG- 329
+ N++ S ++Y ++ G C + + AE V+ DM K G +P V Y+ +I+G
Sbjct: 279 RDANILVDKSDL--GIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGH 336
Query: 330 ----------------------------------YARWGSLEESLRLCDEMVERGLFPNI 355
Y + G+ E+ L E E + +
Sbjct: 337 RKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDR 396
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
V YN L + G +EEA ++ +M K I PD +Y L G C G ++A L +
Sbjct: 397 VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIE 456
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+ D N+L + + M RG+ P T VI+G G
Sbjct: 457 MDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE 516
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTL 535
+KA Y + E + S + G C D A L + L + F
Sbjct: 517 LDKAEAFYESL----EHKSRENDASMVKGFCAAGCLDHAFERFIRL-EFPLPKSVYFTLF 571
Query: 536 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 595
S + I +A L M LG+ + Y LI C+ +A+E ++++ + I
Sbjct: 572 TSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKI 631
Query: 596 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
PD TYT +I + + + P++ AL + M + V PD TY ++
Sbjct: 632 VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL 677
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/502 (23%), Positives = 207/502 (41%), Gaps = 28/502 (5%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
+ ++++ Q+G AYD+ E R + +N L ++ ++ L++ M
Sbjct: 363 IVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM 422
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G +V + I C + + +A ++ M G P++V +N++ G G
Sbjct: 423 TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNG-- 480
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
LA + + + +M V P V++N +I G G L AE + E
Sbjct: 481 -LAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND---- 535
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFP-NIVVYNSILYWLYRHGD-MEEASKVLSDM 381
A+++ G+ G L+ + E R FP VY ++ L D + +A +L M
Sbjct: 536 ASMVKGFCAAGCLDHAF----ERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRM 591
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 441
+ P++ Y L CR + +A + ++ ++ D F+ I++N C+
Sbjct: 592 WKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEP 651
Query: 442 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 501
M R + PDV T + ++ N++ L + M D P++ Y
Sbjct: 652 KQAYALFEDMKRRDVKPDVVTYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIM 704
Query: 502 INGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
IN C + L ++++R+++ D T+ L+ L+ EMK+ +
Sbjct: 705 INRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN-------LSREMKAFDV 757
Query: 561 SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA 620
+ Y LI+ CK G EAK + MI G+ PD YT LI K + +E
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKM 817
Query: 621 LHDYMILKGVIPDQKTYDAIVT 642
+ D MI GV PD Y A++
Sbjct: 818 IFDRMIESGVKPDVVPYTALIA 839
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 132/305 (43%), Gaps = 18/305 (5%)
Query: 221 ALCKECRVV-EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGN 279
+LC E + +A ++ RM K G P + +I C+ ++ K + ++
Sbjct: 573 SLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVR---KAREFFEILVTK 629
Query: 280 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 339
+ P+ +Y +IN +C+ A + DM + +P V TY+ L++ +
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPE 682
Query: 340 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 399
L + EM + P++V Y ++ D+++ + DM + I PD +Y +L +
Sbjct: 683 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Query: 400 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 459
L ++ FD+ D F +L+++ CK MI G+ PD
Sbjct: 743 -------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 460 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 519
+I CK+G ++A +++ MI+ +P++ Y + I G C+ A LV
Sbjct: 796 AAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVK 855
Query: 520 ELRKR 524
E+ ++
Sbjct: 856 EMLEK 860
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 124/302 (41%), Gaps = 38/302 (12%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
F C + A D++ + G + + VN++ + ++ +
Sbjct: 568 FTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILV 627
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
+ V ++ T+ + I C+ +A + M + P+VV+++++++ D
Sbjct: 628 TKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------D 680
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
L + ++M V P+ V Y +IN +C L + DM + P V TY
Sbjct: 681 PELDMKREMEAF---DVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYT 737
Query: 325 TL----------------------------IDGYARWGSLEESLRLCDEMVERGLFPNIV 356
L ID + G L E+ R+ D+M+E G+ P+
Sbjct: 738 VLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAA 797
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
Y +++ + G ++EA + MI+ + PD Y L G CRNG++ +A+KL ++
Sbjct: 798 PYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEM 857
Query: 417 LK 418
L+
Sbjct: 858 LE 859
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 109/235 (46%), Gaps = 23/235 (9%)
Query: 161 AYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY 220
AY + +++ R V ++ L+ E++ + + M +F + +V + + I
Sbjct: 654 AYALFEDMKRRDVKPDVVTYSVLLNSDPELD-------MKREMEAFDVIPDVVYYTIMIN 706
Query: 221 ALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL---MT 277
C + + + M + P+VV++ ++ LK + NL M
Sbjct: 707 RYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL-------------LKNKPERNLSREMK 753
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
V P+ Y +I+ CK G L A+ + M+++G +P Y LI + G L+
Sbjct: 754 AFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLK 813
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
E+ + D M+E G+ P++V Y +++ R+G + +A K++ +M++K I P + S
Sbjct: 814 EAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 14/203 (6%)
Query: 163 DVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYAL 222
D+ E+ + V + ++ +ND+ + + L+K M V +V T+ + +
Sbjct: 684 DMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNK 743
Query: 223 CKE--CRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNS 280
+ R ++A V P+V + ++ID CK G L A ++ +M +
Sbjct: 744 PERNLSREMKAFDVK---------PDVFYYTVLIDWQCKIGDLGEAKRIFDQM---IESG 791
Query: 281 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 340
V P++ Y ++I CK G L A+ + M+++G +P V Y LI G R G + +++
Sbjct: 792 VDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAV 851
Query: 341 RLCDEMVERGLFPNIVVYNSILY 363
+L EM+E+G+ P +++ Y
Sbjct: 852 KLVKEMLEKGIKPTKASLSAVHY 874
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 212/496 (42%), Gaps = 51/496 (10%)
Query: 198 RLYKGMGSFGHVEN-----------------VNTFNLAIYALCKECRVVEAITVIYRMLK 240
RL+KG+ GH+ VN + Y CK EA + M
Sbjct: 206 RLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEV 265
Query: 241 DGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG 300
DG + + V + ++ CK ++ +A+++ +M S + +N++I+GF K G
Sbjct: 266 DGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRM---VERSFELDPCIFNTLIHGFMKLGM 322
Query: 301 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL-CDEMVERGLFPNIVVYN 359
L + M+K G + +V TY +I Y + G+++ +LRL + + N+ Y
Sbjct: 323 LDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYT 382
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
++++ Y+ G M++A +L M+D I PD +Y +L + L + L A+ + IL
Sbjct: 383 NLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDN 442
Query: 420 D------LIED-----------------------AFSLNILLNYICKSXXXXXXXXXXGS 450
+I+D A L ++ +C
Sbjct: 443 GCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEK 502
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M+ G P ++ +VI + E L N + ++D P++ Y +N LCK
Sbjct: 503 MVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKND 562
Query: 511 TDVAKNLVDELRKRKLLDATT-FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
D A ++D + + L ++++I G++ EA +M G+ + + Y
Sbjct: 563 RDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMI 622
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
+IN +NG +EA EL++ ++ +RP TYT LI+ F K E+ D M+ G
Sbjct: 623 MINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG 682
Query: 630 VIPDQKTYDAIVTPFL 645
+ P+ Y A++ FL
Sbjct: 683 LSPNVVLYTALIGHFL 698
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 208/469 (44%), Gaps = 25/469 (5%)
Query: 172 GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEA 231
GC ++N+ + L + N I+ L + V +V+T+ + + LCK+ A
Sbjct: 507 GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAA 566
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSI 291
+I M + G P V ++ II K G + A + KM L +G + P+ ++Y +
Sbjct: 567 FAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKM-LESG--IQPDEIAYMIM 623
Query: 292 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
IN + + G + A E++ ++VK PS TY LI G+ + G +E+ + D+M+E GL
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
PN+V+Y +++ + GD + + + M + I D +Y L GL R A K
Sbjct: 684 SPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR----AMARK 739
Query: 412 LHNQIL----KFDLIEDAFSLNILL-------NYICKSXXXXXXXXXXGSMITRGLPPDV 460
Q++ K L++ L+ NY KS S+I P++
Sbjct: 740 KKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSII-----PNL 794
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 520
Y T+I G C G ++A M K PNL Y + + + A +L +
Sbjct: 795 YLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG 854
Query: 521 LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
D ++TL+ G + + +A L EM+ G++ N+ +Y L+ LC +
Sbjct: 855 TNCEP--DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLT 912
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
EA +++K M I P I +T LI ++ E AL M+ G
Sbjct: 913 MEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 125/609 (20%), Positives = 248/609 (40%), Gaps = 103/609 (16%)
Query: 133 LMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVND 192
+++ S++ P +F+ L+ ++G + + ++ +G +V ++ + + +
Sbjct: 298 MVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Query: 193 IDRFWRLY-KGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN----- 246
+D RL+ GS NV+ + I+ K+ + +A+ ++ RML +G P+
Sbjct: 358 VDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYF 417
Query: 247 ---------------VVSFNMIIDGAC---------------KTGSL--DLALK------ 268
+V I+D C K SL ++A K
Sbjct: 418 VLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAA 477
Query: 269 ------------------VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
+ ++ M P SYNS+I ++ + ++
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
+ + F P V TY +++ + + + + D M E GL P + +Y+SI+ L + G
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
+ EA + + M++ I PD+ +Y I+ RNG + EA +L +++K L +F+ +
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
L++ K M+ GL P+V +I K G+ + + L+ M + D
Sbjct: 658 LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEND 717
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD-------------------ATT 531
+ + Y + ++GL + + + ++ E K KLL + +
Sbjct: 718 IKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKS 777
Query: 532 F-------------------NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
F NT+I+GY +G++DEA+ M+ G+ N VTY L+
Sbjct: 778 FAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 573 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
+ G E A +L + PD + Y+TL+ P + +AL M G+ P
Sbjct: 838 SHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 633 DQKTYDAIV 641
++ +Y+ ++
Sbjct: 895 NKDSYEKLL 903
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 169/350 (48%), Gaps = 4/350 (1%)
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M G ++ T + + C + +A+ V +M K G +VV ++ID CK
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
+ AL+V+K+M + PN V+Y+S+I G CK G L AE L +M P+V T
Sbjct: 64 VVPALEVLKRMK---DRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
++ LID YA+ G L + + M++ + PN+ Y+S++Y L H ++EA K+L MI
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
K P+ +Y+ L G ++ + + +KL + + + + + S N L+ ++
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
G M + GL P++ + V+ G G EKAL + M K ++ Y I
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 503 NGLCKMASTDVAKNLVDELR-KRKLLDATTFNTLISGYSNSGQIDEAFGL 551
+G+CK A +L +L+ KR D + +I+ + +G EA L
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 170/365 (46%), Gaps = 40/365 (10%)
Query: 281 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 340
+ P+ V+ +S++NGFC + A V G M K G + V LID + + +L
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 341 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
+ M +RG+ PN+V Y+S++ L + G + +A + L +M K I P+ +++ L +
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 401 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 460
+ G L++ ++ + + MI + P+V
Sbjct: 129 AKRGKLSK-------------VDSVYKM----------------------MIQMSIDPNV 153
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 520
+T +++I G C ++A+++ + MI PN+ Y++ NG K + D L+D+
Sbjct: 154 FTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDD 213
Query: 521 LRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 579
+ +R + T + NTLI GY +G+ID A G+ M S GL N +YN ++ L NG
Sbjct: 214 MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANG- 272
Query: 580 DEEAKELMKMMIMQGIRPD--CITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
E K L + MQ R D ITYT +I K +E L + K V PD K Y
Sbjct: 273 -EVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY 331
Query: 638 DAIVT 642
++
Sbjct: 332 TIMIA 336
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 139/290 (47%), Gaps = 3/290 (1%)
Query: 124 IAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNF 183
+ LE+L+ + D + +L+ + G A + E+ ++ +V ++
Sbjct: 65 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSAL 124
Query: 184 LSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGT 243
+ + + + +YK M NV T++ IY LC RV EAI ++ M+ G
Sbjct: 125 IDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 244 FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 303
PNVV+++ + +G K+ +D +K++ M V N+VS N++I G+ + G + L
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDD---MPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A V G M G P++R+Y ++ G G +E++L + M + +I+ Y +++
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
+ + ++EA + + K + PD +Y I+ L R G TEA L+
Sbjct: 302 GMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALN 351
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Query: 415 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 474
+++K + D + + L+N C S G M G+ DV +ID CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 475 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFN 533
AL + M PN+ Y+S I GLCK A+ + E+ +K+ + TF+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
LI Y+ G++ + + M + + N TY++LI LC + +EA +++ +MI +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 594 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
G P+ +TY+TL F K ++ I L D M +GV + + + ++ + A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 124/263 (47%), Gaps = 1/263 (0%)
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 440
M+ I PD + + L G C + + +A+ + Q+ K + D IL++ +CK+
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 441 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 500
M RG+ P+V T +++I G CK G A R + M PN+ +++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 501 FINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 559
I+ K ++ + + + + T+++LI G ++DEA + M S G
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 560 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 619
+ N VTY+TL N K+ ++ +L+ M +G+ + ++ TLI + + + +
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 620 ALHDYMILKGVIPDQKTYDAIVT 642
+ YM G+IP+ ++Y+ ++
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLA 266
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 159/334 (47%), Gaps = 10/334 (2%)
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH-GDMEEAS 375
+PS + Y T++ L + + M E GL P + N ++ L R+ G ++
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 376 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
K+ +M + PD Y+Y L GLCR G + EA KL ++++ D + L+N +
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 436 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 495
C S M ++G+ P+V+T ++++DG CK G + +A+ L+ M+ +PN+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 496 TIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTE 554
Y + I GLCK A L+D + + L DA + +ISG+ + EA E
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 555 MKSLGLSANRVTYN-------TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
M G++ NR+T+N ++ LC N A L M +GI + T +L+
Sbjct: 358 MILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSMRSRGISVEVETLESLVK 416
Query: 608 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
KK ++ + L D ++ G IP + T+ ++
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 181/391 (46%), Gaps = 48/391 (12%)
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
R +++ V ++M P+ ++ ++ + L+LA K K M + + P
Sbjct: 101 RPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREI---GLPPTVA 157
Query: 287 SYNSIINGFCKKGGLLLAE-EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
S N +I C+ G + A ++ +M K G +P TY TLI G R+G ++E+ +L E
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
MVE+ P +V Y S++ L +++EA + L +M K I P+ ++Y+ L +GLC++G
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
+A++L F++ M+ RG P++ T T
Sbjct: 278 SLQAMEL------FEM-----------------------------MMARGCRPNMVTYTT 302
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL---- 521
+I G CK ++A+ L + M +P+ +Y I+G C ++ A N +DE+
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362
Query: 522 ----RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 577
R + T N ++ G + AF L M+S G+S T +L+ LCK
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKK 421
Query: 578 GCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
G ++A +L+ ++ G P T+ LI H
Sbjct: 422 GEFQKAVQLVDEIVTDGCIPSKGTWKLLIGH 452
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 171/360 (47%), Gaps = 15/360 (4%)
Query: 139 QHCPAVFDALVRACTQVGATEGAYD---VICELRTRGCLVSVHAWNNFLSHLVEVNDIDR 195
++C D L+ C G +D V +++ C S A+ L+ LVE N ++
Sbjct: 80 ENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNL 139
Query: 196 FWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEA-ITVIYRMLKDGTFPNVVSFNMII 254
++ YK M G V + N+ I ALC+ V+A + + M K G P+ ++ +I
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
G C+ G +D A K+ + M P V+Y S+ING C + A L +M
Sbjct: 200 SGLCRFGRIDEAKKLFTE---MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
G EP+V TY++L+DG + G +++ L + M+ RG PN+V Y +++ L + ++EA
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI---- 430
++L M + + PD Y + G C EA ++++ + + + NI
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 431 ---LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
++ +C + SM +RG+ +V T +++ CK G +KA++L + ++
Sbjct: 377 SNEVVRGLCANYPSRAFTLYL-SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIV 435
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 6/305 (1%)
Query: 340 LRLCDEMVERGLFPNIVVYNSILYWLYR-HGDME---EASKVLSDMIDKHICPDQYSYAI 395
+ ++++ R N VV IL + R +G + ++ +V M D P Q +Y
Sbjct: 67 FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVT 126
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG-SMITR 454
+ L L A K + + + L SLN+L+ +C++ M R
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G PD YT T+I G C+ G ++A +L+ M++ D P + Y S INGLC + D A
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 515 KNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
++E++ + + + T+++L+ G G+ +A L M + G N VTY TLI
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
LCK +EA EL+ M +QG++PD Y +I+ F E D MIL G+ P+
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Query: 634 QKTYD 638
+ T++
Sbjct: 367 RLTWN 371
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
Query: 455 GLPPDVYTKATVIDGNCK-LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 513
GLPP V + +I C+ G + L+++ M K P+ Y + I+GLC+ D
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 514 AKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
AK L E+ ++ T+ +LI+G S +DEA EMKS G+ N TY++L++
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 573 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
LCK+G +A EL +MM+ +G RP+ +TYTTLIT K+ +E + L D M L+G+ P
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 633 DQKTYDAIVTPF 644
D Y +++ F
Sbjct: 331 DAGLYGKVISGF 342
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 131/300 (43%), Gaps = 12/300 (4%)
Query: 143 AVFDALVRA-CTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYK 201
A + L++A C G + + E+ RGC + + +S L ID +L+
Sbjct: 157 ASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFT 216
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
M V T+ I LC V EA+ + M G PNV +++ ++DG CK G
Sbjct: 217 EMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG 276
Query: 262 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 321
+L+ M+ +M PN V+Y ++I G CK+ + A E+L M G +P
Sbjct: 277 R---SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAG 333
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY-------NSILYWLYRHGDMEEA 374
Y +I G+ E+ DEM+ G+ PN + + N ++ L +
Sbjct: 334 LYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAF 393
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
+ LS M + I + + L + LC+ G +A++L ++I+ I + +L+ +
Sbjct: 394 TLYLS-MRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGH 452
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 209/487 (42%), Gaps = 2/487 (0%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
+DAL+ A + G A +++ ++ S +NN ++ + + K M
Sbjct: 181 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMT 240
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G ++ T N+ + A + +A++ M P+ +FN+II K G
Sbjct: 241 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 300
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
AL + M P+ V++ SI++ + KG + V MV G +P++ +Y
Sbjct: 301 QALDLFNSMREKRAECR-PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
L+ YA G +L + ++ + G+ P++V Y +L R +A +V M +
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
P+ +Y L + NG+L EA+++ Q+ + + + S+ LL +S
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 479
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
+ +RG+ + + I EKA+ LY M K + + + I+G
Sbjct: 480 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 539
Query: 505 LCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
C+M+ A + + E+ + L +++++ YS GQ+ EA + +MK G +
Sbjct: 540 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 599
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 623
+ Y ++++ + +A EL M GI PD I + L+ FNK P V L D
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
Query: 624 YMILKGV 630
M K +
Sbjct: 660 LMREKEI 666
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 184/435 (42%), Gaps = 6/435 (1%)
Query: 213 NTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKK 272
+T+N I A EA+ V +M +G P++V+ N+++ A K+G K +
Sbjct: 214 STYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS-AYKSGRQ--YSKALSY 270
Query: 273 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM--VKAGFEPSVRTYATLIDGY 330
LM G V P++ ++N II K G A ++ M +A P V T+ +++ Y
Sbjct: 271 FELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLY 330
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
+ G +E + + MV GL PNIV YN+++ HG A VL D+ I PD
Sbjct: 331 SVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 390
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
SY L R+ +A ++ + K + + N L++ +
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M G+ P+V + T++ + + + N YNS I A
Sbjct: 451 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 510
Query: 511 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
+ A L +RK+K+ D+ TF LISG + EA EM+ L + + Y++
Sbjct: 511 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 570
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
++ K G EA+ + M M G PD I YT+++ +N + L M G
Sbjct: 571 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 630
Query: 630 VIPDQKTYDAIVTPF 644
+ PD A++ F
Sbjct: 631 IEPDSIACSALMRAF 645
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 178/399 (44%), Gaps = 12/399 (3%)
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
+NM+I + +D A + +M S P++ +Y+++IN + G A ++
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKW---SCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
DM++A PS TY LI+ G+ E+L +C +M + G+ P++V +N +L Y+ G
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS-AYKSG 261
Query: 370 DMEEASKVLSD---MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL--KFDLIED 424
+ SK LS M + PD ++ I+ L + G ++AL L N + + + D
Sbjct: 262 --RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 319
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
+ +++ +M+ GL P++ + ++ G + AL +
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK-RKLLDATTFNTLISGYSNSG 543
+ + P++ Y +N + AK + +RK R+ + T+N LI Y ++G
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
+ EA + +M+ G+ N V+ TL+ ++ ++ +GI + Y
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 499
Query: 604 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ I + E+ IAL+ M K V D T+ +++
Sbjct: 500 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 538
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 173/402 (43%), Gaps = 5/402 (1%)
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
+F ++I + G ++L + V K M + N N + YN +I + + A +
Sbjct: 109 NFPVLIRELSRRGCIELCVNVFKWMKIQK-NYCARNDI-YNMMIRLHARHNWVDQARGLF 166
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
+M K +P TY LI+ + R G ++ L D+M+ + P+ YN+++
Sbjct: 167 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 226
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
G+ EA +V M D + PD ++ I+ ++AL + + D +
Sbjct: 227 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLP--PDVYTKATVIDGNCKLGNTEKALRLYNGM 486
NI++ + K SM + PDV T +++ G E ++ M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 545
+ +PN+ YN+ + + A +++ ++++ ++ D ++ L++ Y S Q
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
+A + M+ N VTYN LI+ NG EA E+ + M GI+P+ ++ TL
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
+ ++ V + +G+ + Y++ + ++ A
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 508
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/504 (20%), Positives = 210/504 (41%), Gaps = 12/504 (2%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTR--GCLVSVHAWNNFLSHLVEVN-DIDRFWRLYK 201
F+ ++ +++G + A D+ +R + C V + + + HL V +I+ +++
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM-HLYSVKGEIENCRAVFE 344
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
M + G N+ ++N + A A++V+ + ++G P+VVS+ +++ ++
Sbjct: 345 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404
Query: 262 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 321
A +V +M PN V+YN++I+ + G L A E+ M + G +P+V
Sbjct: 405 QPGKAKEVFL---MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
+ TL+ +R + RG+ N YNS + ++E+A + M
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI--LKFDLIEDAFSLNILLNYICKSX 439
K + D ++ IL G CR EA+ ++ L L ++ +S ++L Y K
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYS-SVLCAY-SKQG 579
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
M G PDV +++ KA L+ M +P+ +
Sbjct: 580 QVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACS 639
Query: 500 SFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
+ + K L+D +R++++ F + S + + A L M
Sbjct: 640 ALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY 699
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
S + N +++L K+G E +L +I G+ + TY L+ H + +
Sbjct: 700 LPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKY 759
Query: 619 IALHDYMILKGVIPDQKTYDAIVT 642
I + ++M G+ P + Y I++
Sbjct: 760 IEVLEWMSGAGIQPSNQMYRDIIS 783
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 207/483 (42%), Gaps = 2/483 (0%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
+DAL+ A + G A +++ ++ S +NN ++ + + K M
Sbjct: 48 TYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKM 107
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G ++ T N+ + A + +A++ M P+ +FN+II K G
Sbjct: 108 TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 167
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
AL + M P+ V++ SI++ + KG + V MV G +P++ +Y
Sbjct: 168 SQALDLFNSMREKRA-ECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
L+ YA G +L + ++ + G+ P++V Y +L R +A +V M
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 286
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ P+ +Y L + NG+L EA+++ Q+ + + + S+ LL +S
Sbjct: 287 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 346
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
+ +RG+ + + I EKA+ LY M K + + + I+
Sbjct: 347 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 406
Query: 504 GLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
G C+M+ A + + E+ + L +++++ YS GQ+ EA + +MK G
Sbjct: 407 GSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP 466
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
+ + Y ++++ + +A EL M GI PD I + L+ FNK P V L
Sbjct: 467 DVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLM 526
Query: 623 DYM 625
D M
Sbjct: 527 DLM 529
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 184/435 (42%), Gaps = 6/435 (1%)
Query: 213 NTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKK 272
+T+N I A EA+ V +M +G P++V+ N+++ A K+G K +
Sbjct: 82 STYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS-AYKSGRQ--YSKALSY 138
Query: 273 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM--VKAGFEPSVRTYATLIDGY 330
LM G V P++ ++N II K G A ++ M +A P V T+ +++ Y
Sbjct: 139 FELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLY 198
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
+ G +E + + MV GL PNIV YN+++ HG A VL D+ I PD
Sbjct: 199 SVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 258
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
SY L R+ +A ++ + K + + N L++ +
Sbjct: 259 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 318
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M G+ P+V + T++ + + + N YNS I A
Sbjct: 319 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 378
Query: 511 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
+ A L +RK+K+ D+ TF LISG + EA EM+ L + + Y++
Sbjct: 379 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 438
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
++ K G EA+ + M M G PD I YT+++ +N + L M G
Sbjct: 439 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 498
Query: 630 VIPDQKTYDAIVTPF 644
+ PD A++ F
Sbjct: 499 IEPDSIACSALMRAF 513
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 165/366 (45%), Gaps = 9/366 (2%)
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 342
P++ +Y+++IN + G A ++ DM++A PS TY LI+ G+ E+L +
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 343 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD---MIDKHICPDQYSYAILTEG 399
C +M + G+ P++V +N +L Y+ G + SK LS M + PD ++ I+
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLS-AYKSG--RQYSKALSYFELMKGAKVRPDTTTFNIIIYC 160
Query: 400 LCRNGYLTEALKLHNQIL--KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
L + G ++AL L N + + + D + +++ +M+ GL
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
P++ + ++ G + AL + + + P++ Y +N + AK +
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 518 VDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
+RK R+ + T+N LI Y ++G + EA + +M+ G+ N V+ TL+ +
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
+ ++ +GI + Y + I + E+ IAL+ M K V D T
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 400
Query: 637 YDAIVT 642
+ +++
Sbjct: 401 FTILIS 406
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 155/363 (42%), Gaps = 3/363 (0%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
YN +I + + A + +M K +P TY LI+ + R G ++ L D+M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+ P+ YN+++ G+ EA +V M D + PD ++ I+ +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP--PDVYTKAT 465
+AL + + D + NI++ + K SM + PDV T +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
++ G E ++ M+ +PN+ YN+ + + A +++ ++++
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 526 LL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
++ D ++ L++ Y S Q +A + M+ N VTYN LI+ NG EA
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
E+ + M GI+P+ ++ TL+ ++ V + +G+ + Y++ + +
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 645 LLA 647
+ A
Sbjct: 374 INA 376
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 210/505 (41%), Gaps = 12/505 (2%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTR--GCLVSVHAWNNFLSHLVEVN-DIDRFWRLY 200
F+ ++ +++G + A D+ +R + C V + + + HL V +I+ ++
Sbjct: 153 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM-HLYSVKGEIENCRAVF 211
Query: 201 KGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKT 260
+ M + G N+ ++N + A A++V+ + ++G P+VVS+ +++ ++
Sbjct: 212 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 271
Query: 261 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 320
A +V +M PN V+YN++I+ + G L A E+ M + G +P+V
Sbjct: 272 RQPGKAKEVFL---MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 328
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
+ TL+ +R + RG+ N YNS + ++E+A +
Sbjct: 329 VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS 388
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI--LKFDLIEDAFSLNILLNYICKS 438
M K + D ++ IL G CR EA+ ++ L L ++ +S ++L Y K
Sbjct: 389 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYS-SVLCAY-SKQ 446
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
M G PDV +++ KA L+ M +P+
Sbjct: 447 GQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIAC 506
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
++ + K L+D +R++++ F + S + + A L M
Sbjct: 507 SALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDP 566
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
S + N +++L K+G E +L +I G+ + TY L+ H + +
Sbjct: 567 YLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRK 626
Query: 618 VIALHDYMILKGVIPDQKTYDAIVT 642
I + ++M G+ P + Y I++
Sbjct: 627 YIEVLEWMSGAGIQPSNQMYRDIIS 651
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 3/291 (1%)
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
+YN ++ RH +++A + +M PD +Y L R G A+ L + +
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 417 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 476
L+ + + N L+N S M G+ PD+ T V+
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL---LDATTFN 533
KAL + M +P+ T +N I L K+ + A +L + +R+++ D TF
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
+++ YS G+I+ + M + GL N V+YN L+ +G A ++ +
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 594 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
GI PD ++YT L+ + + P + + M + P+ TY+A++ +
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 303
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 211/485 (43%), Gaps = 52/485 (10%)
Query: 52 EQLSPKLTTF-----MVNRVVSEFHN--SPHLALDFYNWVGML--FPHSLHSSCTLLQVL 102
E LS K ++ ++ ++ F N + AL F++W H + S + +L
Sbjct: 64 ETLSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHIL 123
Query: 103 VNSRWFTEALSLMRNLIAKEGIAPLELLEALMD--ESYQHCPAVFDALVRACTQVGATEG 160
V +R +A +L+ + + +L+++L+D E P VFD LV+ ++ E
Sbjct: 124 VKARLLIDARALIESSLLNSP-PDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLEL 182
Query: 161 AYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIY 220
+DV L G +SV N + + + D WR+Y+ N T + I
Sbjct: 183 GFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQ 242
Query: 221 ALCKECRVVEAITVIYRMLKDGTFPNVVS--------------------------FNMII 254
LCKE R+ E + ++ R+ P+V+ NM++
Sbjct: 243 VLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVV 302
Query: 255 D---------GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
D K G L A KV +M L G S NS Y + C+KG + AE
Sbjct: 303 DTIGYSIVVYAKAKEGDLVSARKVFDEM-LQRGFSA--NSFVYTVFVRVCCEKGDVKEAE 359
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
+L +M ++G P T+ LI G+AR+G E+ L C+ MV RGL P+ +N ++ +
Sbjct: 360 RLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSV 419
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ ++ A+++L+ IDK PD+++Y+ L G + +ALKL + +++ +
Sbjct: 420 SKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYE-MEYRKMSPG 478
Query: 426 FSL-NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
F + L+ +C M R + P+ +I K+G+ A R+YN
Sbjct: 479 FEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYN 538
Query: 485 GMIKM 489
MI +
Sbjct: 539 EMISV 543
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 131/295 (44%), Gaps = 1/295 (0%)
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
P+ T +I + G L+E + L D + + P+++V S+++ + +EE+ +
Sbjct: 232 PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSL 291
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
L ++ K++ D Y+I+ + G L A K+ +++L+ ++F + + C+
Sbjct: 292 LKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
M G+ P T +I G + G EK L M+ P+ +
Sbjct: 352 KGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSA 411
Query: 498 YNSFINGLCKMASTDVAKN-LVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK 556
+N + + K+ + + A L + K + D T++ LI G+ ID+A L EM+
Sbjct: 412 FNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEME 471
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 611
+S + +LI LC G E ++ +K+M + I P+ Y LI F K
Sbjct: 472 YRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQK 526
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/323 (18%), Positives = 130/323 (40%), Gaps = 34/323 (10%)
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
+ L+ YA+ LE + + + G +++ N+++++ + + ++ I
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 226
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
DK I P++ + I+ + LC+ G L E + L ++I + L+ + +
Sbjct: 227 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 286
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
++ + + D + V+ K G+ A ++++ M++ N +Y F+
Sbjct: 287 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 346
Query: 503 NGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
C+ G + EA L +EM+ G+S
Sbjct: 347 RVCCE----------------------------------KGDVKEAERLLSEMEESGVSP 372
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
T+N LI + G +E+ E ++M+ +G+ P C + ++ +K + +
Sbjct: 373 YDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEIL 432
Query: 623 DYMILKGVIPDQKTYDAIVTPFL 645
I KG +PD+ TY ++ F+
Sbjct: 433 TKSIDKGFVPDEHTYSHLIRGFI 455
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 198/417 (47%), Gaps = 38/417 (9%)
Query: 34 IIFRAICVHLKHR---RWSALEQLSPK-LTTFMVNRVVSEFHNSPHLALDFYNWVGM--L 87
+I A+ + HR RWS L L P T + + N+PHL+L F+ + L
Sbjct: 41 LISDAVSILTHHRSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSL 100
Query: 88 FPHSLHSSCTLLQVLVNSRWFTEALSLMR---NLIA--KEGIAPLELLEALMDESYQHC- 141
H HS TL+ +L SR + A ++R L A ++ L++ +L+ +SY C
Sbjct: 101 CSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLI-KSYNRCG 159
Query: 142 --PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRL 199
P VFD L+++C +GA V+ +LR+RG + N ++ + +++
Sbjct: 160 SAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKM 219
Query: 200 YKGMGSFGHVE-------------NVNTFNLAIYALCKECRVVEAITVIYRMLKD--GTF 244
Y+ + V N TFN + + +E E + I+R +++ G
Sbjct: 220 YREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGE-TEMVERIWREMEEEVGCS 278
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
PNV S+N++++ C G + A KV ++M + V + V+YN++I G C ++ A
Sbjct: 279 PNVYSYNVLMEAYCARGLMSEAEKVWEEMKV---RGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
+E+ DM G E + TY L++GY + G ++ L + EM +G + + +++
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 365 LYRHGDME---EASKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
L D + EA+ ++ D + + + P + Y +L + LC +G + AL + +++
Sbjct: 396 LCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMV 452
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 13/253 (5%)
Query: 353 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALK 411
PN +NS++ YR G+ E ++ +M ++ C P+ YSY +L E C G ++EA K
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 471
+ ++ ++ D + N ++ +C + M +G+ T +++G C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 472 KLGNTEKALRLYNGMIKMD-EQPNLTIYNSFINGLCK-------MASTDVAKNLVDELRK 523
K G+ + L +Y M + E LTI + + GLC + + D+ K+ V E
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTI-EALVEGLCDDRDGQRVVEAADIVKDAVRE--A 419
Query: 524 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ L+ G++D A + EM G ++ TY I+ G DEE
Sbjct: 420 MFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVG-DEET 478
Query: 584 KELMKMMIMQGIR 596
L+ + + + ++
Sbjct: 479 SALLAIEMAESLK 491
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G P+VY+ +++ C G +A +++ M ++ YN+ I GLC A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 515 KNLVDELRKRKLLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
K L ++ K ++ T T+ L++GY +G +D + EMK G A+ +T L+
Sbjct: 336 KELFRDM-GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVE 394
Query: 573 LLCKNGCDE---EAKELMKMMIMQGI-RPDCITYTTLITHFNKKHHPEEVIALHDYMILK 628
LC + + EA +++K + + + P Y L+ + + + + M+ K
Sbjct: 395 GLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGK 454
Query: 629 GVIPDQKTYDAIVTPF 644
G P Q+TY A + +
Sbjct: 455 GFKPSQETYRAFIDGY 470
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-------------QPNLTIYN 499
+RG+ + T +I + ++Y + +D+ +PN T +N
Sbjct: 190 SRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFN 249
Query: 500 SFINGLCKMASTDVAKNLVDELRKRKLLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKS 557
S + + T++ + + E+ + ++N L+ Y G + EA + EMK
Sbjct: 250 SMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKV 309
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
G+ + V YNT+I LC N +AKEL + M ++GI C+TY L+ + K +
Sbjct: 310 RGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDS 369
Query: 618 VIALHDYMILKGVIPDQKTYDAIV 641
+ ++ M KG D T +A+V
Sbjct: 370 GLVVYREMKRKGFEADGLTIEALV 393
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 3/218 (1%)
Query: 134 MDESYQHCPAVF--DALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVN 191
M+E P V+ + L+ A G A V E++ RG + + A+N + L
Sbjct: 271 MEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNF 330
Query: 192 DIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFN 251
++ + L++ MG G T+ + CK V + V M + G + ++
Sbjct: 331 EVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIE 390
Query: 252 MIIDGACKTGSLDLALKVMKKMNLMTGNSV-WPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
+++G C ++ + ++ +P+ Y ++ C+ G + A + +
Sbjct: 391 ALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAE 450
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
MV GF+PS TY IDGY G E S L EM E
Sbjct: 451 MVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMAE 488
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 209/435 (48%), Gaps = 8/435 (1%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
+V + ++ L+E ++K + GH ++ ++ + A+ + + +++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
+ + GT + + FN +I+ ++G+++ A++ + KM + N P + +YN++I G+
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLN---PTTSTYNTLIKGY 160
Query: 296 CKKGGLLLAEEVLGDMVKAG---FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 352
G + E+L M++ G P++RT+ L+ + + +EE+ + +M E G+
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 353 PNIVVYNSILYWLYRHGDMEEA-SKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEAL 410
P+ V YN+I + G+ A S+V+ M+ K P+ + I+ G CR G + + L
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
+ ++ + + + N L+N + M + DV T +TV++
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAW 340
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT 530
G EKA +++ M+K +P+ Y+ G + A+ L++ L +
Sbjct: 341 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVV 400
Query: 531 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
F T+ISG+ ++G +D+A + +M G+S N T+ TL+ + +A+E+++MM
Sbjct: 401 IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 460
Query: 591 IMQGIRPDCITYTTL 605
G++P+ T+ L
Sbjct: 461 RGCGVKPENSTFLLL 475
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 205/431 (47%), Gaps = 47/431 (10%)
Query: 222 LCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC---KTGSLDLALKVMKKMNLMTG 278
L + R EA TV + + G P+++S+ ++ + GS+ + +++ +G
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ----SG 110
Query: 279 NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
+ +S+ +N++IN F + G + A + L M + G P+ TY TLI GY G E
Sbjct: 111 TKL--DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 339 SLRLCDEMVERG---LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
S L D M+E G + PNI +N ++ + +EEA +V+ M + + PD +Y
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ + G E ++ +++++ ++++
Sbjct: 229 IATCYVQKG---ETVRAESEVVEKMVMKEKAK---------------------------- 257
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
P+ T V+ G C+ G LR M +M + NL ++NS ING ++ D
Sbjct: 258 --PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGID 315
Query: 516 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
++ +++ + D T++T+++ +S++G +++A + EM G+ + Y+ L
Sbjct: 316 EVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 375
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
+ ++A+EL++ +I++ RP+ + +TT+I+ + ++ + + + M GV P+
Sbjct: 376 VRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 434
Query: 635 KTYDAIVTPFL 645
KT++ ++ +L
Sbjct: 435 KTFETLMWGYL 445
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 181/411 (44%), Gaps = 45/411 (10%)
Query: 163 DVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYAL 222
++ E+ G + +N ++ E +++ + M G +T+N I
Sbjct: 101 SIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 223 CKECRVVEAITVIYRMLKDGTF---PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGN 279
+ + ++ ML++G PN+ +FN+++ CK ++ A +V+KKM
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC--- 217
Query: 280 SVWPNSVSYNSIINGFCKKGGLLLAE-EVLGDMV-KAGFEPSVRTYATLIDGYARWGSLE 337
V P++V+YN+I + +KG + AE EV+ MV K +P+ RT ++ GY R G +
Sbjct: 218 GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVR 277
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
+ LR M E + N+VV+NS++ D + +VL+ M + ++ D +Y+ +
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVM 337
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
GY+ +A ++ + M+ G+
Sbjct: 338 NAWSSAGYMEKAAQVFKE-----------------------------------MVKAGVK 362
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
PD + + + G + +KA L +I ++ +PN+ I+ + I+G C S D A +
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRV 421
Query: 518 VDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
+++ K + + TF TL+ GY Q +A + M+ G+ T+
Sbjct: 422 FNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 159/371 (42%), Gaps = 49/371 (13%)
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA---RWGSLEESLRLC 343
S ++N ++G A+ V + + G PS+ +Y TL+ ++GS+ +
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS---IV 103
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
E+ + G + + +N+++ G+ME+A + L M + + P +Y L +G
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
G + +L DL+ + ++++ P++ T
Sbjct: 164 GKPERSSEL------LDLMLEEGNVDV--------------------------GPNIRTF 191
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE--- 520
++ CK E+A + M + +P+ YN+ + T A++ V E
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 521 LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN----LLCK 576
++++ + T ++ GY G++ + MK + + AN V +N+LIN ++ +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
+G DE ++ +M ++ D ITY+T++ ++ + E+ + M+ GV PD
Sbjct: 312 DGIDE----VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 367
Query: 637 YDAIVTPFLLA 647
Y + ++ A
Sbjct: 368 YSILAKGYVRA 378
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 190/461 (41%), Gaps = 77/461 (16%)
Query: 7 PFKFRSIFFRAFHAGKRFSNPTAAAEDIIFRAICVHLKHRRWSAL----EQLSPKLTTFM 62
P + +++F G R P+ + + A+ V ++ S++ EQ KL +
Sbjct: 61 PHEAQTVFKTLAETGHR---PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIF 117
Query: 63 VNRVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKE 122
N V++ F S ++ ++ + + ++ +N S LI
Sbjct: 118 FNAVINAFSESGNME------------DAVQALLKMKELGLNP-----TTSTYNTLIKGY 160
Query: 123 GIA-----PLELLEALMDESYQHC-PAV--FDALVRACTQVGATEGAYDVICELRTRGCL 174
GIA ELL+ +++E P + F+ LV+A + E A++V+ ++ G
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 175 VSVHAWNNFLSHLVEVNDIDRFWR--LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAI 232
+N + V+ + R + K + N T + + C+E RV + +
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 233 TVIYRMLKDGTFPNVVSFNMIIDGACKT---GSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
+ RM + N+V FN +I+G + +D L +MK+ N V + ++Y+
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECN------VKADVITYS 334
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR----------------- 332
+++N + G + A +V +MVKAG +P Y+ L GY R
Sbjct: 335 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE 394
Query: 333 --------------W---GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 375
W GS+++++R+ ++M + G+ PNI + ++++ +A
Sbjct: 395 SRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAE 454
Query: 376 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
+VL M + P+ ++ +L E G E+ K N +
Sbjct: 455 EVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 495
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 188/437 (43%), Gaps = 49/437 (11%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
+V +N AI L R +A V M K +P+ V+ ++I K G A +V
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRS--AKEVW 329
Query: 271 KKMNLMTGNSV-WPNSVSYNSIINGFCKKGGLLLAEEVL---GDMVKAGFEPSVRTYATL 326
+ M+ V W V + ++ FC +G L EE L +M K G + Y TL
Sbjct: 330 EIFEKMSEKGVKWSQDV-FGGLVKSFCDEG---LKEEALVIQTEMEKKGIRSNTIVYNTL 385
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
+D Y + +EE L EM ++GL P+ YN ++ R + +L +M D +
Sbjct: 386 MDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGL 445
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 446
P+ SY L R ++ D+ DAF
Sbjct: 446 EPNVKSYTCLISAYGRTKKMS------------DMAADAFL------------------- 474
Query: 447 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 506
M GL P ++ +I G EKA + M K +P++ Y S ++
Sbjct: 475 ---RMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFR 531
Query: 507 KMASTDVAKNL-VDELRKRKLLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
+ S D K + + +L R+ + T T+NTL+ G++ G EA + +E +GL +
Sbjct: 532 R--SGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPS 589
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 623
+TYN L+N + G D + +L+K M ++PD ITY+T+I F + + H
Sbjct: 590 VMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHK 649
Query: 624 YMILKGVIPDQKTYDAI 640
M+ G +PD ++Y+ +
Sbjct: 650 MMVKSGQVPDPRSYEKL 666
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/482 (20%), Positives = 180/482 (37%), Gaps = 65/482 (13%)
Query: 78 LDFYNWVGMLFPH--SLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMD 135
L FY W+ + P S + L +L R L L+ NL KE + L A +
Sbjct: 222 LYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAIS 281
Query: 136 -----ESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEV 190
+ Y V++A+ + A +I LR G
Sbjct: 282 GLSASQRYDDAWEVYEAMDKINVYPDNVTCAI-LITTLRKAG------------------ 322
Query: 191 NDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSF 250
W +++ M G + + F + + C E EA+ + M K G N + +
Sbjct: 323 RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVY 382
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
N ++D K+ ++ +V M + P++ +YN +++ + ++ + E +L +
Sbjct: 383 NTLMDAYNKSNHIE---EVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSL---------------------------------- 336
M G EP+V++Y LI Y R +
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 337 --EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
E++ +EM + G+ P++ Y S+L R GD + ++ M+ + I + +Y
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN 559
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
L +G + G EA + ++ K L + N+L+N + M
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL 619
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
L PD T +T+I ++ + ++A + M+K + P+ Y L A T
Sbjct: 620 NLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNR 679
Query: 515 KN 516
K+
Sbjct: 680 KD 681
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 151/364 (41%), Gaps = 9/364 (2%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG-SLEESLRLCDEM 346
YN+ I+G A EV M K P T A LI + G S +E + ++M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
E+G+ + V+ ++ G EEA + ++M K I + Y L + ++ ++
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
E L ++ L A + NIL++ + M GL P+V + +
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 467 IDGNCKLGNTEK----ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
I G T+K A + M K+ +P+ Y + I+ + A +E+
Sbjct: 456 ISA---YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 523 KRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
K + + T+ +++ + SG + + M + R+TYNTL++ K G
Sbjct: 513 KEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYI 572
Query: 582 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
EA++++ G++P +TY L+ + + ++ L M + PD TY ++
Sbjct: 573 EARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
Query: 642 TPFL 645
F+
Sbjct: 633 YAFV 636
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 180/418 (43%), Gaps = 47/418 (11%)
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
++++ M G + ++N + + R + A +M+ +G P ++N+++ G
Sbjct: 206 KIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGF 265
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
+ L+ AL+ + M + P+ ++N++INGFC+ + AE++ +M
Sbjct: 266 FLSLRLETALRFFEDMKT---RGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIG 322
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
PSV +Y T+I GY +++ LR+ +EM G+ PN Y+++L L G M EA +
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 378 LSDMIDKHICP-DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 436
L +M+ KHI P D + L + G + A ++LK
Sbjct: 383 LKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAA----TEVLK------------------ 420
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD----EQ 492
+M T +P + +I+ CK +A++L + +I+ + Q
Sbjct: 421 -------------AMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQ 467
Query: 493 PNL----TIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEA 548
L + YN I LC T A+ L +L KR + D N LI G++ G D +
Sbjct: 468 DTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSS 527
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
+ + M G+ Y LI G +AK + M+ G PD + ++I
Sbjct: 528 YEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVI 585
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 203/459 (44%), Gaps = 20/459 (4%)
Query: 195 RFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
+F+R + G H + +T I L + ++ A ++ M + G + F ++I
Sbjct: 135 QFFRWTERSGLIRH--DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLI 192
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
+ K G + ++K+ +KM + V SYNS+ ++G ++A+ MV
Sbjct: 193 ESYGKAGIVQESVKIFQKMKDL---GVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSE 249
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
G EP+ TY ++ G+ LE +LR ++M RG+ P+ +N+++ R M+EA
Sbjct: 250 GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEA 309
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
K+ +M I P SY + +G + + L++ ++ + +A + + LL
Sbjct: 310 EKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPG 369
Query: 435 ICKSXXXXXXXXXXGSMITRGLPP---DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 491
+C + +M+ + + P ++ K V K G+ A + M ++
Sbjct: 370 LCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLV--SQSKAGDMAAATEVLKAMATLNV 427
Query: 492 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL---------LDATTFNTLISGYSNS 542
Y I CK ++ + A L+D L ++++ ++ + +N +I N+
Sbjct: 428 PAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNN 487
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
GQ +A L ++ G+ ++ N LI K G + + E++K+M +G+ + Y
Sbjct: 488 GQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAY 546
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
LI + K P + D M+ G +PD + +++
Sbjct: 547 ELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVI 585
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 129/345 (37%), Gaps = 77/345 (22%)
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKG 202
A F+ ++ + + A + E++ SV ++ + + V+ +D R+++
Sbjct: 291 ATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEE 350
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVS------------- 249
M S G N T++ + LC ++VEA ++ M+ P S
Sbjct: 351 MRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAG 410
Query: 250 -----------------------FNMIIDGACKTGSLDLALKVM-----KKMNLMTGNSV 281
+ ++I+ CK + + A+K++ K++ L +++
Sbjct: 411 DMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTL 470
Query: 282 WPNSVSYNSIINGFCKKGGLLLAE----------------------------------EV 307
+YN II C G AE E+
Sbjct: 471 EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEI 530
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
L M + G Y LI Y G ++ D MVE G P+ ++ S++ L+
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFE 590
Query: 368 HGDMEEASKVLSDMIDKHICPDQYS--YAILTEGLCRNGYLTEAL 410
G ++ AS+V+ MIDK++ + A + E L G++ EAL
Sbjct: 591 DGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEAL 635
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
D F LI Y +G + E+ + +MK LG+ +YN+L ++ + G AK
Sbjct: 184 DEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF 243
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
M+ +G+ P TY ++ F E + + M +G+ PD T++ ++ F
Sbjct: 244 NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGF 300
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 175/392 (44%), Gaps = 14/392 (3%)
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
V +A+ V+ M K G P+ F ++D CK GS+ A KV + M PN
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR----EKFPPNLRY 238
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
+ S++ G+C++G L+ A+EVL M +AG EP + + L+ GYA G + ++ L ++M
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR 298
Query: 348 ERGLFPNIVVYNSILYWLYR-HGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCRNGY 405
+RG PN+ Y ++ L R M+EA +V +M +++ C D +Y L G C+ G
Sbjct: 299 KRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM-ERYGCEADIVTYTALISGFCKWGM 357
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
+ + + + + K ++ + ++ K M RG PD+
Sbjct: 358 IDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNV 417
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
VI CKLG ++A+RL+N M P + + ING A N E+ R
Sbjct: 418 VIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477
Query: 526 LLDATTFNTLISGYSNSGQIDEAFGLTTEM------KSLGLSANRVTYNTLINLLCKNGC 579
+ A + TL S +N + D+ + ++ K+ N + I+ L G
Sbjct: 478 IFSAPQYGTLKSLLNNLVR-DDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGH 536
Query: 580 DEEAKELMKMMIMQGIRPDCITYTTLITHFNK 611
+EA M+ + P TY L+ NK
Sbjct: 537 VKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK 568
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 5/316 (1%)
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
EP + + L+ +A +++++ + DEM + GL P+ V+ +L L ++G ++EASK
Sbjct: 166 EPEL--FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK 223
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 436
V DM +K P+ + L G CR G L EA ++ Q+ + L D LL+
Sbjct: 224 VFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYA 282
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL-GNTEKALRLYNGMIKMDEQPNL 495
+ M RG P+V +I C+ ++A+R++ M + + ++
Sbjct: 283 HAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADI 342
Query: 496 TIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTE 554
Y + I+G CK D +++D++RK+ ++ + T+ ++ + Q +E L +
Sbjct: 343 VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEK 402
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
MK G + + YN +I L CK G +EA L M G+ P T+ +I F +
Sbjct: 403 MKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF 462
Query: 615 PEEVIALHDYMILKGV 630
E M+ +G+
Sbjct: 463 LIEACNHFKEMVSRGI 478
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 111/539 (20%), Positives = 214/539 (39%), Gaps = 64/539 (11%)
Query: 50 ALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRW 107
AL + L ++ RV+S ++ +L F+ W + HS +++ +L R
Sbjct: 87 ALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQ 146
Query: 108 FTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICE 167
F L+ + P EL+E P +F L+R + A +V+ E
Sbjct: 147 FGAVWGLIEEM---RKTNP-ELIE----------PELFVVLMRRFASANMVKKAVEVLDE 192
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
+ G + + L L + + ++++ M N+ F +Y C+E +
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGK 251
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
++EA V+ +M + G P++V F ++ G G + A + MN M PN
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL---MNDMRKRGFEPNVNC 308
Query: 288 YNSIINGFCK-KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
Y +I C+ + + A V +M + G E + TY LI G+ +WG +++ + D+M
Sbjct: 309 YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
++G+ P+ V Y I+ + EE +++ M + PD Y ++ C+ G +
Sbjct: 369 RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEV 428
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG----------- 455
EA++L N++ L + I++N M++RG
Sbjct: 429 KEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLK 488
Query: 456 -------------LPPDVYTKATVIDGNCKL---------------GNTEKALRLYNGMI 487
+ DV++ + +C+L G+ ++A M+
Sbjct: 489 SLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMM 548
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQID 546
+MD P Y + GL K+ + +A + +++ K +F Y G+ D
Sbjct: 549 EMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSFKM----YKKKGEED 603
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 142/322 (44%), Gaps = 21/322 (6%)
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM-EEASKVLSDMIDKHICPD 389
A WG +EE + E++E LF +L + +M ++A +VL +M + PD
Sbjct: 149 AVWGLIEEMRKTNPELIEPELF-------VVLMRRFASANMVKKAVEVLDEMPKYGLEPD 201
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI-----LLNYICKSXXXXXX 444
+Y + L + LC+NG + EA K+ F+ + + F N+ LL C+
Sbjct: 202 EYVFGCLLDALCKNGSVKEASKV------FEDMREKFPPNLRYFTSLLYGWCREGKLMEA 255
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
M GL PD+ ++ G G A L N M K +PN+ Y I
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQA 315
Query: 505 LCKMAST-DVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
LC+ D A + E+ + D T+ LISG+ G ID+ + + +M+ G+
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP 375
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
++VTY ++ K EE EL++ M +G PD + Y +I K +E + L
Sbjct: 376 SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 435
Query: 623 DYMILKGVIPDQKTYDAIVTPF 644
+ M G+ P T+ ++ F
Sbjct: 436 NEMEANGLSPGVDTFVIMINGF 457
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 193/405 (47%), Gaps = 17/405 (4%)
Query: 244 FPNVVS--FNMIIDGACKTGSLDLALKVMKKMNLMTGN--SVWPNSVSYNSIINGFCKKG 299
FP + + N+ ++ CK +L+ A + L+ G V P+ ++YN++I G+ +
Sbjct: 8 FPGISTKLLNISVNSLCKFRNLERAETL-----LIDGIRLGVLPDVITYNTLIKGYTRFI 62
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
G+ A V M +AG EP V TY +LI G A+ L L+L DEM+ GL P++ YN
Sbjct: 63 GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYN 122
Query: 360 SILYWLYRHGDMEEASKVLSDMID-KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
+++ ++ G EA K+L + I + P +Y IL + LC++G+ A++L LK
Sbjct: 123 TLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH-LK 181
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
+ + + NIL+N +CKS + G P+ T T++ K EK
Sbjct: 182 SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEK 241
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR--KLLDATTFNTLI 536
L+L+ M K + + ++ L K + A + EL + + D ++NTL+
Sbjct: 242 GLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLL 301
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
+ Y G +D L E++ GL + T+ ++N L G A++ + + G++
Sbjct: 302 NLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQ 361
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
P +T LI K H + + L M ++ D+ TY ++V
Sbjct: 362 PSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVV 402
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 164/359 (45%), Gaps = 37/359 (10%)
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
N +N CK L AE +L D ++ G P V TY TLI GY R+ ++E+ + M E
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
G+ P++ YNS++ ++ + ++ +M+ + PD +SY L + G E
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A K+ ++ + GL P + T ++D
Sbjct: 137 AFKILHEDIHL----------------------------------AGLVPGIDTYNILLD 162
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL- 527
CK G+T+ A+ L+ +K +P L YN INGLCK ++ EL+K
Sbjct: 163 ALCKSGHTDNAIELFK-HLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
+A T+ T++ Y + +I++ L +MK G + + +++ L K G EEA E M
Sbjct: 222 NAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECM 281
Query: 588 KMMIMQGIRP-DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
++ G R D ++Y TL+ + K + + V L + + +KG+ PD T+ IV L
Sbjct: 282 HELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLL 340
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 163/378 (43%), Gaps = 13/378 (3%)
Query: 172 GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEA 231
G L V +N + ID + + + M G +V T+N I K +
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSI 291
+ + ML G P++ S+N ++ K G A K++ + + G + P +YN +
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAG--LVPGIDTYNIL 160
Query: 292 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA---RWGSLEESLRLCDEMVE 348
++ CK G A E+ + K+ +P + TY LI+G R GS++ +R E+ +
Sbjct: 161 LDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMR---ELKK 216
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
G PN V Y ++L ++ +E+ ++ M + D ++ + L + G E
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEE 276
Query: 409 ALK-LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
A + +H + +D S N LLN K + +GL PD YT ++
Sbjct: 277 AYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIV 336
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
+G +GNT A + + +M QP++ N I+GLCK D A L + R
Sbjct: 337 NGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR--- 393
Query: 528 DATTFNTLISGYSNSGQI 545
D T+ +++ G++
Sbjct: 394 DEFTYTSVVHNLCKDGRL 411
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 111/233 (47%), Gaps = 9/233 (3%)
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKEC 226
EL+ G + + L + I++ +L+ M G+ + + AL K
Sbjct: 213 ELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTG 272
Query: 227 RVVEAITVIYRMLKDGTFP-NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNS 285
R EA ++ +++ GT ++VS+N +++ K G+LD +++++ + + P+
Sbjct: 273 RAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEM---KGLKPDD 329
Query: 286 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
++ I+NG G AE+ L + + G +PSV T LIDG + G ++ ++RL
Sbjct: 330 YTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFAS 389
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI-CPDQYSYAILT 397
M R F Y S+++ L + G + ASK+L +K + P A+L+
Sbjct: 390 MEVRDEF----TYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLS 438
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 130/252 (51%), Gaps = 1/252 (0%)
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
M + V P+ ++N+++NG+CK G ++ A++ + +++AG +P TY + I G+ R
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKE 205
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
++ + ++ EM + G N V Y ++Y L+ ++EA +L M D + CP+ +Y +
Sbjct: 206 VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTV 265
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L + LC +G +EA+ L Q+ + + D +L+ C M+ G
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
L P+V T +I G CK N KA+ L + M++ + P+L YN+ I G C + D A
Sbjct: 326 LMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAY 384
Query: 516 NLVDELRKRKLL 527
L+ + + L+
Sbjct: 385 RLLSLMEESGLV 396
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 172/393 (43%), Gaps = 35/393 (8%)
Query: 74 PHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLE 131
P AL F +W+ + F H++ S +L+ +L + E + +I
Sbjct: 40 PQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMI------------ 87
Query: 132 ALMDESYQHCPAVFDAL--VRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVE 189
+ C +V DAL V C + + ++++ +L + +NN LS L
Sbjct: 88 -------KSCNSVRDALFVVDFCRTMRKGD-SFEIKYKLTPK-------CYNNLLSSLAR 132
Query: 190 VNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVS 249
++ RLY M ++ TFN + CK VVEA + +++ G P+ +
Sbjct: 133 FGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFT 192
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
+ I G C+ +D A KV K+ MT N N VSY +I G + + A +L
Sbjct: 193 YTSFITGHCRRKEVDAAFKVFKE---MTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLV 249
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
M P+VRTY LID G E++ L +M E G+ P+ +Y ++
Sbjct: 250 KMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
++EAS +L M++ + P+ +Y L +G C+ + +A+ L +++L+ +L+ D + N
Sbjct: 310 TLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYN 368
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 462
L+ C S M GL P+ T
Sbjct: 369 TLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M+ + PD+YT T+++G CKLG +A + +I+ P+ Y SFI G C+
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKE 205
Query: 511 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
D A + E+ + + ++ LI G + +IDEA L +MK N TY
Sbjct: 206 VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTV 265
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
LI+ LC +G EA L K M GI+PD YT LI F +E L ++M+ G
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Query: 630 VIPDQKTYDAIVTPF 644
++P+ TY+A++ F
Sbjct: 326 LMPNVITYNALIKGF 340
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 8/283 (2%)
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
YN++L L R G +EE ++ ++M++ + PD Y++ L G C+ GY+ EA + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
+ D F+ + C+ M G + + +I G + +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 478 KALRLYNGMIKMDEQ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFN 533
+AL L ++KM + PN+ Y I+ LC A NL ++ + + D +
Sbjct: 243 EALSL---LVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYT 299
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
LI + + +DEA GL M GL N +TYN LI CK +A L+ M+ Q
Sbjct: 300 VLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQ 358
Query: 594 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
+ PD ITY TLI + + L M G++P+Q+T
Sbjct: 359 NLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 2/291 (0%)
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
GD + ++ + + Y L+ AR+G +EE RL EM+E + P+I +N+++ +
Sbjct: 109 GDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKL 168
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
G + EA + ++ +I PD ++Y G CR + A K+ ++ + + S
Sbjct: 169 GYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSY 228
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
L+ + ++ M P+V T +ID C G +A+ L+ M +
Sbjct: 229 TQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSE 288
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 547
+P+ +Y I C + D A L++ + + L+ + T+N LI G+ + +
Sbjct: 289 SGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHK 347
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 598
A GL ++M L + +TYNTLI C +G + A L+ +M G+ P+
Sbjct: 348 AMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 2/250 (0%)
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
Y L L R G + E +L+ ++L+ + D ++ N L+N CK +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 512
G PD +T + I G+C+ + A +++ M + N Y I GL + D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 513 VAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 571
A +L+ +++ + T+ LI SGQ EA L +M G+ + Y LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 572 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 631
C +EA L++ M+ G+ P+ ITY LI F KK + + + L M+ + ++
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLV 361
Query: 632 PDQKTYDAIV 641
PD TY+ ++
Sbjct: 362 PDLITYNTLI 371
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 519 DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
D + L +N L+S + G ++E L TEM +S + T+NTL+N CK G
Sbjct: 110 DSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLG 169
Query: 579 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 638
EAK+ + +I G PD TYT+ IT ++ + + M G ++ +Y
Sbjct: 170 YVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 639 AIV 641
++
Sbjct: 230 QLI 232
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 146/330 (44%), Gaps = 3/330 (0%)
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 309
F ID C+ +D AL M + PN YN+++NG+ K G + A
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGK--PNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
M K +P V T+ LI+GY R + +L L EM E+G PN+V +N+++ G
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
+EE K+ +MI+ + + IL +GLCR G + +A L +L ++ F
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
L+ +C + +G P T+++G K G TEKA M+
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 490 DEQPNLTIYNSFINGLCKMA-STDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEA 548
P+ +N + LC STD + + K D TT++ L+SG++ G+ E
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
L EM + + TYN L++ L G
Sbjct: 458 EVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 6/323 (1%)
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLF---PNIVVYNSILYWLYRHGDMEEASKVLS 379
+ + ID Y R ++ +L D M + L PN+ VYN+++ + GDM++A +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
M + PD ++ IL G CR+ AL L ++ + + S N L+ S
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
MI G T ++DG C+ G + A L ++ P+ Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 500 SFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
S + LC A +++EL K+ TL+ G SG+ ++A G +M +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
G+ + VT+N L+ LC + +A L + +G PD TY L++ F K+ +E
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 619 IALHDYMILKGVIPDQKTYDAIV 641
L + M+ K ++PD TY+ ++
Sbjct: 458 EVLVNEMLDKDMLPDIFTYNRLM 480
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 171/411 (41%), Gaps = 58/411 (14%)
Query: 68 SEFHNSP---HLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIA-- 120
S+ N P H +NW L F H S + + L + F + L+ + A
Sbjct: 84 SKIRNHPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANP 143
Query: 121 ---KEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSV 177
GI LE + + DA RA ++ A+D + L V V
Sbjct: 144 CPCSSGIFSCPELEPIFR-------SAIDAYCRA-RKMDYALLAFDTMKRLIDGKPNVGV 195
Query: 178 HAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYR 237
+N ++ V+ D+D+ R Y+ MG +V TFN+ I C+ + A+ +
Sbjct: 196 --YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFRE 253
Query: 238 MLKDGTFPNVVSFN-----------------------------------MIIDGACKTGS 262
M + G PNVVSFN +++DG C+ G
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
+D A ++ ++L+ V P+ Y S++ C + + A E++ ++ K G P
Sbjct: 314 VDDACGLV--LDLLN-KRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
TL++G + G E++ ++M+ G+ P+ V +N +L L +A+++
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 433
K PD+ +Y +L G + G E L N++L D++ D F+ N L++
Sbjct: 431 SKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMD 481
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
P+ Y + G ++G + +AL+ + ++ K D + NIL+N C+S
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
M +G P+V + T+I G G E+ +++ MI++ + + ++GLC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 508 MASTDVAKNLV-DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
D A LV D L KR L + +L+ + A + E+ G + +
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 626
TL+ L K+G E+A M+ M+ GI PD +T+ L+ H + L
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 627 LKGVIPDQKTYDAIVTPF 644
KG PD+ TY +V+ F
Sbjct: 431 SKGYEPDETTYHVLVSGF 448
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 191/423 (45%), Gaps = 12/423 (2%)
Query: 129 LLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
+ L++E ++ + LV A T+ +I ++ G +N ++
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF-PNV 247
E ++D+ ++++ M G +TFN I K ++ E+ ++ ML+D PN
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 460
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE- 306
+ N+++ C ++ A ++ KM V P+ V++N++ + + G AE+
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQ---SYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
++ M+ +P+VRT T+++GY G +EE+LR M E G+ PN+ V+NS++
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
DM+ +V+ M + + PD +++ L G + +++ +L+ + D
Sbjct: 578 NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIH 637
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ +IL ++ M G+ P+V +I G C G +KA+++Y M
Sbjct: 638 AFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Query: 487 IKM-DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLIS------GY 539
+ PNLT Y + I G + A+ L+ ++ + ++ LI+ G
Sbjct: 698 CGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 757
Query: 540 SNS 542
SNS
Sbjct: 758 SNS 760
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 188/407 (46%), Gaps = 39/407 (9%)
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
+G + + S ++NG ++G A + +++ G +PS+ TY TL+ R
Sbjct: 311 SGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHF 370
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
L L ++ + GL P+ +++N+I+ G++++A K+ M + P ++ L
Sbjct: 371 HSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTL 430
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+G + G L E+ +L + +L+ ++++ + + NIL+ C M + G
Sbjct: 431 IKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG 490
Query: 456 LPPDVYT-----KA-------------------------------TVIDGNCKLGNTEKA 479
+ PDV T KA T+++G C+ G E+A
Sbjct: 491 VKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Query: 480 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISG 538
LR + M ++ PNL ++NS I G + D +VD + + + D TF+TL++
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA 610
Query: 539 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 598
+S+ G + + T+M G+ + ++ L + G E+A++++ M G+RP+
Sbjct: 611 WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Query: 599 CITYTTLITHFNKKHHPEEVIALHDYMI-LKGVIPDQKTYDAIVTPF 644
+ YT +I+ + ++ + ++ M + G+ P+ TY+ ++ F
Sbjct: 671 VVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF 717
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 209/478 (43%), Gaps = 6/478 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
F+ ++ C G A ++ ++ +G +N LS + DI+ Y+ +
Sbjct: 343 FNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIR 402
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G + T ++ LC+ V E VI M ++ + S +I+ G +
Sbjct: 403 KVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVV 462
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL-GDMVKAGFEPSVRTY 323
A + ++ L +S + ++I+ + +KG + AE V G +G V Y
Sbjct: 463 QAKALFERFQL----DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEY 518
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
+I Y + E++L L M +G +P+ YNS+ L ++EA ++L++M+D
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD 578
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
P +YA + R G L++A+ L+ + K + + L+N +S
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEE 638
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
M G+ + ++I K+G E+A R+Y+ M + P++ NS ++
Sbjct: 639 AIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Query: 504 GLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
+ A+++ + LR++ D +F T++ Y G +DEA + EM+ GL ++
Sbjct: 699 LCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
Query: 564 RVTYNTLINLLCKNGCDEEAKELM-KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA 620
++N ++ +G E EL +M++ + + D T+ TL T K P E ++
Sbjct: 759 CTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVS 816
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 187/401 (46%), Gaps = 16/401 (3%)
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
+FN +ID K G L+ A + +M L +G + ++V++N++I+ G L AE +L
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEM-LKSGVPI--DTVTFNTMIHTCGTHGHLSEAESLL 363
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
M + G P +TY L+ +A G +E +L ++ + GLFP+ V + ++L+ L +
Sbjct: 364 KKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR 423
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
+ E V+++M I D++S ++ + G + +A L + + D + + +L
Sbjct: 424 KMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER-FQLDCVLSSTTL 482
Query: 429 NILLN-YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
+++ Y K G G DV +I K EKAL L+ GM
Sbjct: 483 AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA------TTFNTLISGYSN 541
P+ YNS L + D A+ ++ E+ LD+ T+ +I+ Y
Sbjct: 543 NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEM-----LDSGCKPGCKTYAAMIASYVR 597
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
G + +A L M+ G+ N V Y +LIN ++G EEA + +MM G++ + I
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIV 657
Query: 602 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
T+LI ++K EE ++D M PD +++++
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 204/491 (41%), Gaps = 34/491 (6%)
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+N L L D + M G + NT+ + + K V EA+ I M
Sbjct: 148 YNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMG 207
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMK-----KMNL-MTGNSVWPNSVSYNSIIN 293
+ FP+ V+ ++ +G D A + K K++L + +P + S S +N
Sbjct: 208 QRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVN 267
Query: 294 -------GFCKKGGLLLAEEVLGDMVKAGFEPSVR------TYATLIDGYARWGSLEESL 340
K G E+ L +G + S R T+ TLID Y + G L ++
Sbjct: 268 LKQFLSMELFKVGARNPIEKSL--HFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAA 325
Query: 341 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
L EM++ G+ + V +N++++ HG + EA +L M +K I PD +Y IL
Sbjct: 326 NLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLH 385
Query: 401 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 460
G + AL+ + +I K L D + +L+ +C+ M + D
Sbjct: 386 ADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDE 445
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN-----GLCKMASTDV-- 513
++ ++ G +A L+ ++D + T + I+ GL A T
Sbjct: 446 HSVPVIMQMYVNEGLVVQAKALFE-RFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYG 504
Query: 514 AKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
+N+ + D +N +I Y + ++A L MK+ G + TYN+L +
Sbjct: 505 KRNMSGQRN-----DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQM 559
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
L +EA+ ++ M+ G +P C TY +I + + + + L++ M GV P+
Sbjct: 560 LAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPN 619
Query: 634 QKTYDAIVTPF 644
+ Y +++ F
Sbjct: 620 EVVYGSLINGF 630
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/429 (18%), Positives = 168/429 (39%), Gaps = 38/429 (8%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSH 186
L L + + ++ +++L + V + A ++ E+ GC + ++
Sbjct: 535 LSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIAS 594
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
V + + LY+ M G N + I + V EAI M + G N
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
+ +I K G L+ A +V KM G P+ + NS+++ C G++ E
Sbjct: 655 HIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGG---PDVAASNSMLS-LCADLGIVSEAE 710
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ + ++ V ++AT++ Y G L+E++ + +EM E GL + +N ++
Sbjct: 711 SIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYA 770
Query: 367 RHGDMEEASKVLSDM-IDKHICPDQYSYAILTEGLCRNGYLTE----------------- 408
G + E ++ +M +++ + D ++ L L + G +E
Sbjct: 771 ADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLAT 830
Query: 409 ----------------ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
AL+ ++ ++ + F+ N ++ S M
Sbjct: 831 PAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQ 890
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 512
+GL PD+ T+A ++ K G E R+++ + + +P+ +++ + + D
Sbjct: 891 EKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQD 950
Query: 513 VAKNLVDEL 521
+A + E+
Sbjct: 951 LADVVKKEM 959
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 181/383 (47%), Gaps = 40/383 (10%)
Query: 264 DLALKVMKKMNLMTG-NSVWPNSVSYNSIINGFCKKGGLLLAEEVL-GDMVKAGFEPSVR 321
DL KVM+ NL+ V P+ + ++ +N G + L+ ++L G +P+
Sbjct: 138 DLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTC 197
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGL-FPNIVVYNSILYWLYRHGDMEEASKVLSD 380
+ L+ + + G + + + +EM G+ +PN + Y++++ L+ H +EA ++ D
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 381 MIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
MI K I PD ++ ++ G CR G + A K IL F
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKK----ILDF-------------------- 293
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
M G P+VY + +++G CK+G ++A + ++ + K + + Y
Sbjct: 294 -----------MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYT 342
Query: 500 SFINGLCKMASTDVAKNLVDELR-KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
+ +N C+ TD A L+ E++ R D T+N ++ G S+ G+ +EA + + S
Sbjct: 343 TLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSE 402
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
G+ N+ +Y ++N LC NG E+A + + +M +GI P T+ L+ + + E
Sbjct: 403 GVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIG 462
Query: 619 IALHDYMILKGVIPDQKTYDAIV 641
+ + + G+IP K++ A+V
Sbjct: 463 VRVLIGFLRIGLIPGPKSWGAVV 485
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 166/340 (48%), Gaps = 5/340 (1%)
Query: 169 RTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRV 228
R + L ++ N L EVN + R LY + G N FN+ + CK +
Sbjct: 155 RVKPSLNAISTCLNLLIDSGEVN-LSRKLLLY-AKHNLGLQPNTCIFNILVKHHCKNGDI 212
Query: 229 VEAITVIYRMLKDG-TFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
A V+ M + G ++PN ++++ ++D A+++ + M ++ + P+ V+
Sbjct: 213 NFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM--ISKEGISPDPVT 270
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
+N +INGFC+ G + A+++L M K G P+V Y+ L++G+ + G ++E+ + DE+
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+ GL + V Y +++ R+G+ +EA K+L +M D +Y ++ GL G
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
EAL++ +Q + + S I+LN +C + M RG+ P T ++
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
C+ G TE +R+ G +++ P + + + +CK
Sbjct: 451 VRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 150/342 (43%), Gaps = 21/342 (6%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH---G 369
+ GF + TY+ L+D R + D ++ + + S+ L RH
Sbjct: 82 QKGFNHNNATYSVLLDNLVR----HKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRS 137
Query: 370 DMEEASKVLSDMID--KHICPDQYSYAILTEGLCRNGYLTEALKL-----HNQILKFDLI 422
D+ + + ++I + P + + L +G + + KL HN L
Sbjct: 138 DLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHN----LGLQ 193
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP-PDVYTKATVIDGNCKLGNTEKALR 481
+ NIL+ + CK+ M G+ P+ T +T++D +++A+
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 482 LYNGMI-KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGY 539
L+ MI K P+ +N ING C+ + AK ++D ++K + ++ L++G+
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 540 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
G+I EA E+K GL + V Y TL+N C+NG +EA +L+ M R D
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADT 373
Query: 600 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+TY ++ + + EE + + D +GV ++ +Y I+
Sbjct: 374 LTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIIL 415
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 128/284 (45%), Gaps = 25/284 (8%)
Query: 85 GMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAP-----------------L 127
G+ +P+S+ S TL+ L EA+ L ++I+KEGI+P +
Sbjct: 226 GISYPNSITYS-TLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEV 284
Query: 128 ELLEALMDESYQH-C-PAVFD--ALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNF 183
E + ++D ++ C P V++ AL+ +VG + A E++ G + +
Sbjct: 285 ERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTL 344
Query: 184 LSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGT 243
++ + D +L M + + T+N+ + L E R EA+ ++ + +G
Sbjct: 345 MNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGV 404
Query: 244 FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 303
N S+ +I++ C G L+ A+K +++M+ +WP+ ++N ++ C+ G +
Sbjct: 405 HLNKGSYRIILNALCCNGELEKAVKF---LSVMSERGIWPHHATWNELVVRLCESGYTEI 461
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
VL ++ G P +++ +++ + L L D +V
Sbjct: 462 GVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 492 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL--DATTFNTLISGYSNSGQIDEAF 549
QPN I+N + CK + A +V+E+++ + ++ T++TL+ + EA
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 550 GLTTEMKSL-GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
L +M S G+S + VT+N +IN C+ G E AK+++ M G P+ Y+ L+
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 609 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
F K +E D + G+ D Y ++ F
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 217/508 (42%), Gaps = 83/508 (16%)
Query: 209 VENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALK 268
V ++ +N + LC RV++A +++ M G P+VV+F +I G C+ L++A K
Sbjct: 159 VPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHK 218
Query: 269 VMKKMNLMTGNSVWPNSVSYNSIINGFCK----KGGLLLAEEVLGDMVKAGFEPSVRT-- 322
V +M + + PNS++ + +I GF K + G L +E L + +K + S++
Sbjct: 219 VFDEMRVC---GIRPNSLTLSVLIGGFLKMRDVETGRKLMKE-LWEYMKNETDTSMKAAA 274
Query: 323 YATLIDGYARWG------SLEESLRLCDE-----------------------------MV 347
+A L+D R G + E++ LC+ M
Sbjct: 275 FANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR----- 402
+GL P YN+I++ L + G A ++L + + P +Y+Y +L E LC+
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 403 ---------------------NGYL---------TEALKLHNQILKFDLIEDAFSLNILL 432
N YL TE L + +L+ D D ++LN ++
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 433 NYICKSXXXXXXXXXXGSMIT-RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 491
N +CK M+T + PD T TV+ G G E+AL + N ++ ++
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 492 -QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 549
+P + YN+ I GL K+ D A ++ +L K + D+TT+ +I G + ++D A
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAK 574
Query: 550 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
++ + Y + LC++G +A + + G P+ + Y T+I
Sbjct: 575 KFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAEC 634
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTY 637
++ E + + M G PD T+
Sbjct: 635 SRSGLKREAYQILEEMRKNGQAPDAVTW 662
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/527 (22%), Positives = 219/527 (41%), Gaps = 45/527 (8%)
Query: 159 EGAYDVICELRTRGCLVSVHAWNNFLSHLVEVN-DIDRFWRLYKGMGSFGHVENVNTFNL 217
EG D I R + W + + V + D R+ G+ G+ + +
Sbjct: 36 EGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSS 95
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
I++LC R EA L G P+ + N+II + S L V+ ++ +
Sbjct: 96 VIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRL-IGF 154
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
P+ +YN ++N C ++ A +++ DM G P V T+ TLI GY LE
Sbjct: 155 KKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELE 214
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI-----DKHICPDQYS 392
+ ++ DEM G+ PN + + ++ + D+E K++ ++ + +
Sbjct: 215 VAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAA 274
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
+A L + +CR GY + ++ + + + F+ +++ +C+ M
Sbjct: 275 FANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 453 TRGLPPDVYTKATVIDGNCKLG-----------------------------------NTE 477
++GL P + +I G CK G +T
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVAKNLVDELRKRKLLDATTFNTLI 536
KA + M++ + IYN ++ GLC M + T++ LV L+ D T NT+I
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSA-NRVTYNTLINLLCKNGCDEEAKELM-KMMIMQG 594
+G G++D+A + +M + A + VT NT++ L G EEA +++ ++M
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 595 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
I+P + Y +I K H +E +++ + V D TY I+
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIII 561
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 204/477 (42%), Gaps = 15/477 (3%)
Query: 140 HCPAV--FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFW 197
H P V F L+ ++ E A+ V E+R G + + + +++ D++
Sbjct: 193 HLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGR 252
Query: 198 RLYKGMGSFGHVENVNTFNLAIYA-----LCKECRVVEAITVIYRMLKDGTFPNVVSFNM 252
+L K + + E + A +A +C+E + + M + ++
Sbjct: 253 KLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGH 312
Query: 253 IIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 312
+ID C+ A +++ +M + P SYN+II+G CK GG + A ++L +
Sbjct: 313 MIDSLCRYRRNHGAARIVY---IMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ F PS TY L++ + ++ + + M+ + +YN L L +
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPT 429
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL--KFDLIEDAFSLN- 429
E VL M+ PD+Y+ + GLC+ G + +A+K+ + ++ KF DA +LN
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF-CAPDAVTLNT 488
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
++ + + M + P V VI G KL ++A+ ++ + K
Sbjct: 489 VMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKA 548
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEA 548
+ T Y I+GLC D+AK D+ + DA + + G SG + +A
Sbjct: 549 SVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDA 608
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
++ G N V YNT+I ++G EA ++++ M G PD +T+ L
Sbjct: 609 CHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 164/370 (44%), Gaps = 9/370 (2%)
Query: 210 ENVN---TFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
E+VN + I +LC+ R A ++Y M G P S+N II G CK G A
Sbjct: 302 ESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRA 361
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
+++++ + +P+ +Y ++ CK+ A VL M++ R Y
Sbjct: 362 YQLLEEGSEF---EFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIY 418
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
+ G + E L + M++ P+ N+++ L + G +++A KVL DM+
Sbjct: 419 LRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF 478
Query: 387 C-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF-SLNILLNYICKSXXXXXX 444
C PD + + GL G EAL + N+++ + I+ + N ++ + K
Sbjct: 479 CAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEA 538
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
G + + D T A +IDG C + A + ++ +I + + +Y +F+ G
Sbjct: 539 MSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKG 598
Query: 505 LCKMAS-TDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
LC+ +D L D + + +NT+I+ S SG EA+ + EM+ G + +
Sbjct: 599 LCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPD 658
Query: 564 RVTYNTLINL 573
VT+ L L
Sbjct: 659 AVTWRILDKL 668
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Query: 173 CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM--GSFGHVENVNTFNLAIYALCKECRVVE 230
C + N ++ L ++ +D ++ M G F + V T N + L + R E
Sbjct: 443 CRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAV-TLNTVMCGLLAQGRAEE 501
Query: 231 AITVIYRMLKDGTF-PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
A+ V+ R++ + P VV++N +I G K D A+ V ++ SV +S +Y
Sbjct: 502 ALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLE---KASVTADSTTYA 558
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
II+G C + +A++ D++ YA + G + G L ++ ++ +
Sbjct: 559 IIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADS 618
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
G PN+V YN+++ R G EA ++L +M PD ++ IL +
Sbjct: 619 GAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDK 667
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 168/389 (43%), Gaps = 6/389 (1%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
S H +N + +V D W L M S ++ TF + I + EA+
Sbjct: 150 SPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
RM G P+ ++F+++I + A + + P+ + Y +++ G+
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK----DRFEPDVIVYTNLVRGW 265
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
C+ G + AE+V +M AG EP+V TY+ +ID R G + + + +M++ G PN
Sbjct: 266 CRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNA 325
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
+ +N+++ + G E+ +V + M PD +Y L E CR+ L A+K+ N
Sbjct: 326 ITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNT 385
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
++K +A + N + YI K M+ P+ T ++ +
Sbjct: 386 MIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKS 445
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA--TTFN 533
T+ L++ M + +PN+ Y + C M + A L E+ + K L + +
Sbjct: 446 TDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYE 505
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
+++ +GQ+ + L +M GL A
Sbjct: 506 MVLAQLRRAGQLKKHEELVEKMIQKGLVA 534
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 150/323 (46%), Gaps = 2/323 (0%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
YN +I+ K LA ++ M E S+ T+ LI Y R G E++ + M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+ G P+ + ++ ++ L R EA + D+ PD Y L G CR G ++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
EA K+ ++ + + ++ +I+++ +C+ M+ G P+ T ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL- 526
+ K G TEK L++YN M K+ +P+ YN I C+ + + A +++ + K+K
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 527 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
++A+TFNT+ ++ A + ++M N VTYN L+ + + + ++
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 587 MKMMIMQGIRPDCITYTTLITHF 609
K M + + P+ TY L+T F
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMF 475
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 8/242 (3%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
V DAL R C Q+ A+DV ++ GC + +NN + V+ ++ ++Y M
Sbjct: 296 VIDALCR-CGQISR---AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM 351
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G + T+N I A C++ + A+ V+ M+K N +FN I K +
Sbjct: 352 KKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDV 411
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
+ A ++ K M PN+V+YN ++ F + ++ +M EP+V TY
Sbjct: 412 NGAHRMYSK---MMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTY 468
Query: 324 ATLIDGYARWGSLEESLRLCDEMV-ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
L+ + G + +L EMV E+ L P++ +Y +L L R G +++ +++ MI
Sbjct: 469 RLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMI 528
Query: 383 DK 384
K
Sbjct: 529 QK 530
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 133/328 (40%), Gaps = 37/328 (11%)
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
S Y +ID + + + L D M R + +I + ++ R G EA
Sbjct: 150 SPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
+ M D PD+ +++I+ L R +EA FD ++D F
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSF------FDSLKDRFE----------- 252
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
PDV ++ G C+ G +A +++ M +PN+ Y
Sbjct: 253 -------------------PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTY 293
Query: 499 NSFINGLCKMASTDVAKNL-VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
+ I+ LC+ A ++ D L +A TFN L+ + +G+ ++ + +MK
Sbjct: 294 SIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKK 353
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
LG + +TYN LI C++ E A +++ MI + + T+ T+ + KK
Sbjct: 354 LGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNG 413
Query: 618 VIALHDYMILKGVIPDQKTYDAIVTPFL 645
++ M+ P+ TY+ ++ F+
Sbjct: 414 AHRMYSKMMEAKCEPNTVTYNILMRMFV 441
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 10/337 (2%)
Query: 313 KAGFEPSVRTYATLIDGYARW--GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
+ F P T+ L+ R S+ R+ + MV GL P+ V + + L G
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK-FDLIEDAFSLN 429
++EA ++ ++ +KH PD Y+Y L + LC+ L + +++ FD+ D S
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
IL++ +C S + G PD + T++ G C L +A+ +Y M +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 490 DEQPNLTIYNSFINGLCKMASTDVA----KNLVDELRKRKLLDATTFNTLISGYSNSGQI 545
+P+ YN+ I GL K + A K +VD + D T+ +L++G G+
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP---DTATYTSLMNGMCRKGES 351
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
A L EM++ G + N TYNTL++ LCK ++ EL +MM G++ + Y TL
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL 411
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ K E + DY + + D Y + T
Sbjct: 412 VRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLET 448
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 4/287 (1%)
Query: 146 DALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM-G 204
D VR+ + G + A D++ EL + + +N L HL + D+ + M
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
F ++ +F + I +C + EA+ ++ ++ G P+ +N I+ G C
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A+ V KKM V P+ ++YN++I G K G + A L MV AG+EP TY
Sbjct: 283 EAVGVYKKMK---EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
+L++G R G +L L +EM RG PN YN++L+ L + M++ ++ M
Sbjct: 340 SLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSS 399
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
+ + YA L L ++G + EA ++ + + + DA + + L
Sbjct: 400 GVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 146/321 (45%), Gaps = 4/321 (1%)
Query: 183 FLSHLVEVND--IDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLK 240
LSH D I R+ M + G + T ++A+ +LC+ RV EA ++ + +
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 241 DGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG 300
+ P+ ++N ++ CK L + + + +M V P+ VS+ +I+ C
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMR--DDFDVKPDLVSFTILIDNVCNSKN 245
Query: 301 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 360
L A ++ + AGF+P Y T++ G+ E++ + +M E G+ P+ + YN+
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 361 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 420
+++ L + G +EEA L M+D PD +Y L G+CR G AL L ++
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 365
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 480
+ + N LL+ +CK+ M + G+ + AT++ K G +A
Sbjct: 366 CAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAY 425
Query: 481 RLYNGMIKMDEQPNLTIYNSF 501
+++ + + + Y++
Sbjct: 426 EVFDYAVDSKSLSDASAYSTL 446
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 211/499 (42%), Gaps = 14/499 (2%)
Query: 124 IAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNF 183
+ LEL AL + + P + + ++ C G + V + R C S+ + +
Sbjct: 97 VPKLEL--ALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCH-SIEVYKSM 153
Query: 184 LSHLVEVNDIDRFWRLYKGMGSFG-HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDG 242
+ L ++ W L + M + F + + V +AI V+ M K G
Sbjct: 154 VKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFG 213
Query: 243 TFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY-NSIINGFCKKGGL 301
P+ F ++D CK GS+ A K+ + M + +P ++ Y S++ G+C+ G +
Sbjct: 214 FEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-----FPVNLRYFTSLLYGWCRVGKM 268
Query: 302 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 361
+ A+ VL M +AGFEP + Y L+ GYA G + ++ L +M RG PN Y +
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 362 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
+ L + MEEA KV +M D +Y L G C+ G + + + + ++K L
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 422 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 481
+ + ++ K M PD+ VI CKLG ++A+R
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVR 448
Query: 482 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNT---LISG 538
L+N M + P + + INGL A + E+ R L + + T L++
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNT 508
Query: 539 YSNSGQIDEAFGLTTEMKSLGL-SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 597
+++ A + + + S G N +++ I+ L G ++EA MI P
Sbjct: 509 VLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMP 568
Query: 598 DCITYTTLITHFNKKHHPE 616
T+ L+ K ++ E
Sbjct: 569 QPDTFAKLMKGLKKLYNRE 587
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 184/401 (45%), Gaps = 5/401 (1%)
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
P ++ + + + S D+ K ++ ++ M P+ + +++ CK G + A
Sbjct: 178 PQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDA 237
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
++ DM + F ++R + +L+ G+ R G + E+ + +M E G P+IV Y ++L
Sbjct: 238 AKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSG 296
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
G M +A +L DM + P+ Y +L + LC+ + EA+K+ ++ +++ D
Sbjct: 297 YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEAD 356
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
+ L++ CK MI +GL P T ++ + K + E+ L L
Sbjct: 357 VVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELME 416
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSG 543
M +++ P++ IYN I CK+ A L +E+ + L TF +I+G ++ G
Sbjct: 417 KMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Query: 544 QIDEAFGLTTEMKSLGL--SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI-RPDCI 600
+ EA EM + GL + T L+N + K+ E AK++ + +G + +
Sbjct: 477 CLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVL 536
Query: 601 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
++T I K + +E + MI +P T+ ++
Sbjct: 537 SWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLM 577
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 122/274 (44%), Gaps = 8/274 (2%)
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
G +EE K +I+ + + +L + + +A+++ +++ KF D +
Sbjct: 168 GLIEEMRKENPQLIEPEL------FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVF 221
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
LL+ +CK M R P ++ +++ G C++G +A + M +
Sbjct: 222 GCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNE 280
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 547
+P++ Y + ++G A +L+ ++R+R +A + LI +++E
Sbjct: 281 AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEE 340
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
A + EM+ A+ VTY L++ CK G ++ ++ MI +G+ P +TY ++
Sbjct: 341 AMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMV 400
Query: 608 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
KK EE + L + M PD Y+ ++
Sbjct: 401 AHEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 137/588 (23%), Positives = 232/588 (39%), Gaps = 73/588 (12%)
Query: 98 LLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGA 157
+LQV N+ ALS+ ++++ +DE H + LV + + G
Sbjct: 220 VLQVYCNTGKSERALSVFNEILSR----------GWLDE---HISTI---LVVSFCKWGQ 263
Query: 158 TEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
+ A+++I L R ++ + + V+ + ID+ ++L++ M G ++ +++
Sbjct: 264 VDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDV 323
Query: 218 AIYALCKE--------------------------------------CRVVEAIT------ 233
I LCK R+ E I
Sbjct: 324 LIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKK 383
Query: 234 ---VIYRMLKDGTFPN-----VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNS 285
++Y+ L +G N SF + G ++ + +K++K N ++ P+S
Sbjct: 384 SVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHN----KAILPDS 439
Query: 286 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
S + +IN K + +A +L D+V+ G P Y +I+G + G EESL+L E
Sbjct: 440 DSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGE 499
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
M + G+ P+ N I L D A +L M P L + LC NG
Sbjct: 500 MKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGR 559
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
+A K + + + + ++ + K+ + G PDV
Sbjct: 560 AVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHV 619
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN-LVDELRKR 524
+I CK T +A L+N M+ +P + YNS I+G CK D + +V
Sbjct: 620 LIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDE 679
Query: 525 KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
K D T+ +LI G SG+ EA EMK NR+T+ LI LCK G EA
Sbjct: 680 KNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEAL 739
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
+ M + + PD Y +L++ F + + M+ KG P
Sbjct: 740 VYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/576 (20%), Positives = 229/576 (39%), Gaps = 62/576 (10%)
Query: 119 IAKEGIAPLELLEALMDESYQHCPAVFD-----ALVRACTQVGATEGAYDVICELRTRGC 173
I+K + +EL+EA + E + C FD +++ G +E A V E+ +RG
Sbjct: 187 ISKSNSSSVELVEARLKE-MRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW 245
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
L H + + +D+ + L + + N T+ + I+ KE R+ +A
Sbjct: 246 L-DEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQ 304
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
+ +M + G ++ ++++I G CK L++AL + ++ + + P+ ++
Sbjct: 305 LFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKR---SGIPPDRGILGKLLC 361
Query: 294 GFCKKGGL-LLAEEVLGD--------MVKAGFE--------------------------- 317
F ++ L + E ++GD + K+ FE
Sbjct: 362 SFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGV 421
Query: 318 ---------------PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
P + + +I+ + ++ ++ L ++V+ GL P ++YN+I+
Sbjct: 422 SEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNII 481
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
+ + G EE+ K+L +M D + P Q++ + L AL L ++ +
Sbjct: 482 EGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFE 541
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
L+ +C++ + G + IDG K ++ L L
Sbjct: 542 PWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLEL 601
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSN 541
+ + P++ Y+ I LCK T A L +E+ + L T+N++I G+
Sbjct: 602 FRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCK 661
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
G+ID M + + +TY +LI+ LC +G EA M + P+ IT
Sbjct: 662 EGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRIT 721
Query: 602 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
+ LI K E + M K + PD Y
Sbjct: 722 FMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 126/594 (21%), Positives = 239/594 (40%), Gaps = 71/594 (11%)
Query: 109 TEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICEL 168
T+ + + N + G+A L A E Y++ ++A+ ++ ++ ++
Sbjct: 73 TKVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDV 132
Query: 169 RTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG-HVENVNTFNLAIYALCKE-C 226
C +S A+ F+ L +D ++ + G V N T+N + A+ K
Sbjct: 133 LNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNS 192
Query: 227 RVVEAITVIYRMLKDGTFP-NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNS 285
VE + + ++D F + + ++ C TG + AL V ++ L G W +
Sbjct: 193 SSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEI-LSRG---WLDE 248
Query: 286 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
++ FCK G + A E++ + + + +TY LI G+ + ++++ +L ++
Sbjct: 249 HISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEK 308
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ---------YS---- 392
M G+ +I +Y+ ++ L +H D+E A + ++ I PD+ +S
Sbjct: 309 MRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Query: 393 --------------------YAILTEGLCRNGYLTEA----------------------L 410
Y L EG RN + EA L
Sbjct: 369 LSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL 428
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
K HN+ ++ D+ SL+I++N + K+ ++ GL P +I+G
Sbjct: 429 KDHNKA----ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGM 484
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR---KRKLL 527
CK G +E++L+L M +P+ N L + A +L+ ++R +
Sbjct: 485 CKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWI 544
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
TTF L+ +G+ +A ++ G + V I+ L KN + EL
Sbjct: 545 KHTTF--LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELF 602
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ + G PD I Y LI K E L + M+ KG+ P TY++++
Sbjct: 603 RDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMI 656
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 150/370 (40%), Gaps = 14/370 (3%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAK-EGIAPLELLEALMDESYQHCP------AVFDALV 149
+L + + + EA S ++NL+ E E+++ L D + P V + LV
Sbjct: 391 SLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLV 450
Query: 150 RACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHV 209
+A A +D++ G + +NN + + + + +L M G
Sbjct: 451 KANKVDMAVTLLHDIV----QNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVE 506
Query: 210 ENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKV 269
+ T N L + C V A+ ++ +M G P + ++ C+ G A+
Sbjct: 507 PSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGR---AVDA 563
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
K ++ + G + V+ + I+G K G+ E+ D+ G P V Y LI
Sbjct: 564 CKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKA 623
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
+ E+ L +EMV +GL P + YNS++ + G+++ + M + PD
Sbjct: 624 LCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPD 683
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
+Y L GLC +G +EA+ N++ D + + L+ +CK
Sbjct: 684 VITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFR 743
Query: 450 SMITRGLPPD 459
M + + PD
Sbjct: 744 EMEEKEMEPD 753
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 124/331 (37%), Gaps = 40/331 (12%)
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
E + + T+++G+ RWG + + G ++ YN++ L R
Sbjct: 70 ELNTKVVETVLNGFKRWGLAYLFFNWASK--QEGYRNDMYAYNAMASILSRARQNASLKA 127
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL-IEDAFSLNILLNYI 435
++ D+++ ++ L G + EA + +++ + L + +A++ N LL I
Sbjct: 128 LVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAI 187
Query: 436 CKSXXXXXXXXXX--GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 493
KS M G D +T V+ C G +E+AL ++N
Sbjct: 188 SKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFN--------- 238
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 553
E+ R LD L+ + GQ+D+AF L
Sbjct: 239 --------------------------EILSRGWLDEHISTILVVSFCKWGQVDKAFELIE 272
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
++ + N TY LI+ K ++A +L + M G+ D Y LI K
Sbjct: 273 MLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHK 332
Query: 614 HPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
E ++L+ + G+ PD+ ++ F
Sbjct: 333 DLEMALSLYLEIKRSGIPPDRGILGKLLCSF 363
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 180/397 (45%), Gaps = 15/397 (3%)
Query: 132 ALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRG----CLVSVHAWNNFLSHL 187
A M + P++FD++V + + E A+ ++ + R R LVS + +
Sbjct: 125 AEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFD-RVRSDEGSNLVSADTFIVLIRRY 183
Query: 188 VEVNDIDRFWRLYKGMGSFGHV----ENVNTFNLAIYALCKECRVVEAITVIYRM---LK 240
+ + R ++ S+ V + + + ALCKE V EA + R+ +
Sbjct: 184 ARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMD 243
Query: 241 DGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG 300
P+V FN++++G ++ L A K+ ++M M +V P V+Y ++I G+C+
Sbjct: 244 SNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAM---NVKPTVVTYGTLIEGYCRMRR 300
Query: 301 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 360
+ +A EVL +M A E + + +IDG G L E+L + + P IV YNS
Sbjct: 301 VQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNS 360
Query: 361 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 420
++ + GD+ ASK+L M+ + + P +Y + ++ E + L+ ++++
Sbjct: 361 LVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 480
D + +++L +C+ M RG+ PD+ T +I C+L E+A
Sbjct: 421 HSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAF 480
Query: 481 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
++ ++ P + NGL +D+AK L
Sbjct: 481 EEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 155/342 (45%), Gaps = 16/342 (4%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ G EPSV L D + L S+ EM + G + +++S++ L + + E
Sbjct: 94 ETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEM-KPGFTLSPSLFDSVVNSLCKAREFE 152
Query: 373 EA-----SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
A +V SD + D ++ +L R G + +A++ ++ + + +
Sbjct: 153 IAWSLVFDRVRSDEGSNLVSAD--TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSAT 210
Query: 428 ----LNILLNYICKS---XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 480
L +LL+ +CK G + P V +++G + ++A
Sbjct: 211 ELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAE 270
Query: 481 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGY 539
+L+ M M+ +P + Y + I G C+M +A +++E++ ++ ++ FN +I G
Sbjct: 271 KLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGL 330
Query: 540 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
+G++ EA G+ VTYN+L+ CK G A +++KMM+ +G+ P
Sbjct: 331 GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390
Query: 600 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
TY +F+K + EE + L+ +I G PD+ TY I+
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLIL 432
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 155/366 (42%), Gaps = 15/366 (4%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEP---SVRTYATLIDGYARWGSLEESLRLCD 344
++S++N CK +A ++ D V++ S T+ LI YAR G +++++R +
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE 197
Query: 345 EMVERGLFP------NIVVYNSILYWLYRHGDMEEASKVLSDM---IDKHICPDQYSYAI 395
R P + + +L L + G + EAS L + +D + P + I
Sbjct: 198 --FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNI 255
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L G R+ L +A KL ++ ++ + L+ C+ M
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE 315
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
+ + +IDG + G +AL + + P + YNS + CK A
Sbjct: 316 MEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGAS 375
Query: 516 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
++ + R + TT+N +S + +E L ++ G S +R+TY+ ++ +L
Sbjct: 376 KILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKML 435
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C++G A ++ K M +GI PD +T T LI + EE D + +G+IP
Sbjct: 436 CEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQY 495
Query: 635 KTYDAI 640
T+ I
Sbjct: 496 ITFKMI 501
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 147/317 (46%), Gaps = 2/317 (0%)
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
+L + + N M + P + +++ C K + A+E G G PS +TY
Sbjct: 152 NLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTY 211
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
+ L+ G+AR + ++ DEM+ER +++ YN++L L + GD++ K+ +M +
Sbjct: 212 SILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGN 271
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ PD YS+AI C G + A K+ +++ ++DL+ + ++ N ++ +CK+
Sbjct: 272 LGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDD 331
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
MI +G PD +T +++ +C +A +L + M + P+ YN +
Sbjct: 332 AYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLK 391
Query: 504 GLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISG-YSNSGQIDEAFGLTTEMKSLGLS 561
L ++ D A + + + +RK T+ +I G G+++EA M G+
Sbjct: 392 LLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIP 451
Query: 562 ANRVTYNTLINLLCKNG 578
T L N L G
Sbjct: 452 PYSTTVEMLRNRLVGWG 468
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 150/327 (45%), Gaps = 2/327 (0%)
Query: 316 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 375
FE S + + + Y+R E+ R + MVE G+ P + + +L+ L + A
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 376 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
+ I P +Y+IL G R + A K+ +++L+ + + D + N LL+ +
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 436 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 495
CKS M GL PD Y+ A I C G+ A ++ + M + D PN+
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 496 TIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTE 554
+N I LCK D A L+DE+ +K D T+N++++ + + +++ A L +
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF-NKKH 613
M +R TYN ++ LL + G + A E+ + M + P TYT +I KK
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 614 HPEEVIALHDYMILKGVIPDQKTYDAI 640
EE + MI +G+ P T + +
Sbjct: 434 KLEEACRYFEMMIDEGIPPYSTTVEML 460
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 168/394 (42%), Gaps = 64/394 (16%)
Query: 55 SPKLTTFMVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWF---- 108
SP++++ +V +V+ N A F+ W + F HSL S L+++L +S+ F
Sbjct: 63 SPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLW 122
Query: 109 --------------------------------TEALSLMRNLIAKEGIAPL-----ELLE 131
+EA N + + GI P +LL
Sbjct: 123 DFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAF-NRMVEFGIKPCVDDLDQLLH 181
Query: 132 ALMDESY-QHCPAVF---------------DALVRACTQVGATEGAYDVICELRTRGCLV 175
+L D+ + H F LVR ++ GA V E+ R C+V
Sbjct: 182 SLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVV 241
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
+ A+N L L + D+D +++++ MG+ G + +F + I+A C V A V+
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
RM + PNV +FN II CK +D A ++ +M N P++ +YNSI+
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN---PDTWTYNSIMAYH 358
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
C + A ++L M + P TY ++ R G + + + + M ER +P +
Sbjct: 359 CDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTV 418
Query: 356 VVYNSILYWLYR-HGDMEEASKVLSDMIDKHICP 388
Y +++ L R G +EEA + MID+ I P
Sbjct: 419 ATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 1/193 (0%)
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M+ G+ P V ++ C + A + P+ Y+ + G ++
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 511 TDVAKNLVDELRKRK-LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
A+ + DE+ +R ++D +N L+ SG +D + + EM +LGL + ++
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
I+ C G A +++ M + P+ T+ +I K ++ L D MI KG
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 630 VIPDQKTYDAIVT 642
PD TY++I+
Sbjct: 344 ANPDTWTYNSIMA 356
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 136/582 (23%), Positives = 236/582 (40%), Gaps = 40/582 (6%)
Query: 71 HNSPHLALDFYNWVGMLFPHSLHSSCT---LLQVLVNSRWFTEALSLMRNLIAKEGIAPL 127
S AL+ + W FP +HS T L L R F L+ + G+ P
Sbjct: 53 QKSASGALETFRWAST-FPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPD 111
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
+ A+F ++R + + V+ + G S+ +N+ L L
Sbjct: 112 D--------------AIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL 157
Query: 188 VEVN-DIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
V+ + DI R + K M S H +V T+ + + L R+ + ++ M G PN
Sbjct: 158 VKEDIDIAREFFTRKMMASGIH-GDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPN 216
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
V +N ++ CK G + A +M +M PN V++N +I+ +C + L+ +
Sbjct: 217 AVVYNTLLHALCKNGKVGRARSLMSEMK-------EPNDVTFNILISAYCNEQKLIQSMV 269
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+L GF P V T +++ G + E+L + + + +G ++V N+++
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
G M A + +M K P+ +Y +L G C G L AL N +K D I F
Sbjct: 330 ALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFND-MKTDAIRWNF 388
Query: 427 -SLNILLNYIC----KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 481
+ N L+ + S G D Y VI G K E AL
Sbjct: 389 ATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYN--CVIYGFYKENRWEDALE 446
Query: 482 LYNGMIKMDEQPNLTIYNSF-INGLCKMASTDVAKNLVDELRKRKLLDATTFN-TLISGY 539
++KM++ + SF + LC+ D K D++ + + + LI Y
Sbjct: 447 F---LLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRY 503
Query: 540 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
S G+I+E+ L +M + G T+N +I CK + ++ M +G PD
Sbjct: 504 SQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDT 563
Query: 600 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+Y L+ K ++ L M+ K ++PD + +++
Sbjct: 564 ESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 186/450 (41%), Gaps = 51/450 (11%)
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
++T G + +N L L + + R L M V TFN+ I A C E +
Sbjct: 208 MKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDV----TFNILISAYCNEQK 263
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
+++++ ++ + G P+VV+ +++ C G + AL+V++++ G + V+
Sbjct: 264 LIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV---DVVA 320
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
N+++ G+C G + +A+ +M + G+ P+V TY LI GY G L+ +L ++M
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP----DQYSYAILTEGLCRN 403
+ N +N+++ L G ++ K+L M D D Y+ I G +
Sbjct: 381 TDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIY--GFYKE 438
Query: 404 GYLTEALKLHNQILKFD-LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 462
+AL+ +LK + L A + L +C+ MI G P +
Sbjct: 439 NRWEDALEF---LLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIV 495
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
+I + G E++L L N M+ P
Sbjct: 496 SHCLIHRYSQHGKIEESLELINDMVTRGYLPR---------------------------- 527
Query: 523 KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 582
++TFN +I G+ ++ +M G + +YN L+ LC G ++
Sbjct: 528 ------SSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQK 581
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKK 612
A L M+ + I PD +++L+ ++K
Sbjct: 582 AWLLFSRMVEKSIVPDPSMWSSLMFCLSQK 611
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 169/405 (41%), Gaps = 29/405 (7%)
Query: 27 PTAAAEDIIFRAICVHLKHRRWSAL--EQLSPKLTTFMVNRVVSEFHNSPHLALDFY--- 81
P A + + A+C + K R +L E P TF N ++S + N L
Sbjct: 215 PNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTF--NILISAYCNEQKLIQSMVLLE 272
Query: 82 NWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHC 141
+ F + + +++VL N +EAL ++ + +K G +
Sbjct: 273 KCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV-------------- 318
Query: 142 PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYK 201
+ LV+ +G A E+ +G L +V +N ++ +V +D +
Sbjct: 319 -VACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFN 377
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF--PNVVSFNMIIDGACK 259
M + N TFN I L R + + ++ M T + +N +I G K
Sbjct: 378 DMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYK 437
Query: 260 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 319
+ AL+ + KM ++P +V + + C+KGG+ + M+ G PS
Sbjct: 438 ENRWEDALEFLLKME-----KLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPS 492
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
+ LI Y++ G +EESL L ++MV RG P +N+++ + + K +
Sbjct: 493 IIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVE 552
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
DM ++ PD SY L E LC G + +A L +++++ ++ D
Sbjct: 553 DMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPD 597
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 142/350 (40%), Gaps = 38/350 (10%)
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
S G V +V T + LC E RV EA+ V+ R+ G +VV+ N ++ G C G +
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
+A + +M PN +YN +I G+C G L A + DM + T+
Sbjct: 336 VAQRFFIEME---RKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFN 392
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLF--PNIVVYNSILYWLYRH-------------- 368
TLI G + G ++ L++ + M + I YN ++Y Y+
Sbjct: 393 TLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKME 452
Query: 369 -------------------GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G M++ MI + P L ++G + E+
Sbjct: 453 KLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEES 512
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
L+L N ++ + + + N ++ CK M RG PD + +++
Sbjct: 513 LELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEE 572
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 519
C G+ +KA L++ M++ P+ ++++S + L + + V +L D
Sbjct: 573 LCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQD 622
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 213/461 (46%), Gaps = 35/461 (7%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
+V + ++ L+E ++K + GH ++ ++ + A+ + + +++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
+ + GT + + FN +I+ ++G+++ A++ + KM + N P + +YN++I G+
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLN---PTTSTYNTLIKGY 160
Query: 296 CKKGGLLLAEEVLGDMVKAG---FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 352
G + E+L M++ G P++RT+ L+ + + +EE+ + +M E G+
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 353 PNIVVYNSILYWLYRHGDMEEA-SKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEAL 410
P+ V YN+I + G+ A S+V+ M+ K P+ + I+ G CR G + + L
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 411 KLHN----------------------QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 448
+ +++ D I D +L +LL +
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGI-DEVTLTLLLMSFNEEVELVGNQKMK 339
Query: 449 GSMITR----GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
++T + DV T +TV++ G EKA +++ M+K +P+ Y+ G
Sbjct: 340 VQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 399
Query: 505 LCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANR 564
+ A+ L++ L + F T+ISG+ ++G +D+A + +M G+S N
Sbjct: 400 YVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 459
Query: 565 VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
T+ TL+ + +A+E+++MM G++P+ T+ L
Sbjct: 460 KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 500
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 185/413 (44%), Gaps = 54/413 (13%)
Query: 222 LCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC---KTGSLDLALKVMKKMNLMTG 278
L + R EA TV + + G P+++S+ ++ + GS+ + +++ +G
Sbjct: 55 LIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ----SG 110
Query: 279 NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
+ +S+ +N++IN F + G + A + L M + G P+ TY TLI GY G E
Sbjct: 111 TKL--DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 339 SLRLCDEMVERG---LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
S L D M+E G + PNI +N ++ + +EEA +V+ M + + PD +Y
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ + G E ++ +++++ ++++
Sbjct: 229 IATCYVQKG---ETVRAESEVVEKMVMKEKAK---------------------------- 257
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
P+ T V+ G C+ G LR M +M + NL ++NS ING ++ D
Sbjct: 258 --PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDG-- 313
Query: 516 NLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
+DE+ LL +FN + N + L MK + A+ +TY+T++N
Sbjct: 314 --IDEVTLTLLL--MSFNEEVELVGNQKMKVQVLTL---MKECNVKADVITYSTVMNAWS 366
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 628
G E+A ++ K M+ G++PD Y+ L + + P++ L + +I++
Sbjct: 367 SAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE 419
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 181/415 (43%), Gaps = 28/415 (6%)
Query: 163 DVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYAL 222
++ E+ G + +N ++ E +++ + M G +T+N I
Sbjct: 101 SIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 223 CKECRVVEAITVIYRMLKDGTF---PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGN 279
+ + ++ ML++G PN+ +FN+++ CK ++ A +V+KKM
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEEC--- 217
Query: 280 SVWPNSVSYNSIINGFCKKGGLLLAE-EVLGDMV-KAGFEPSVRTYATLIDGYARWGSLE 337
V P++V+YN+I + +KG + AE EV+ MV K +P+ RT ++ GY R G +
Sbjct: 218 GVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVR 277
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
+ LR M E + N+VV+NS++ D D ID + + +L
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD--------RDGID------EVTLTLLL 323
Query: 398 EGLCRNGYLTEALKLHNQILKF----DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 453
L K+ Q+L ++ D + + ++N + M+
Sbjct: 324 MSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVK 383
Query: 454 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 513
G+ PD + + + G + +KA L +I ++ +PN+ I+ + I+G C S D
Sbjct: 384 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGSMDD 442
Query: 514 AKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
A + +++ K + + TF TL+ GY Q +A + M+ G+ T+
Sbjct: 443 AMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 182/435 (41%), Gaps = 70/435 (16%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
F+A++ A ++ G E A + +++ G + +N + +R L M
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 205 SFGHVE---NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
G+V+ N+ TFN+ + A CK+ +V EA V+ +M + G P+ V
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV------------- 224
Query: 262 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE-EVLGDMV-KAGFEPS 319
+YN+I + +KG + AE EV+ MV K +P+
Sbjct: 225 -------------------------TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPN 259
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR------------ 367
RT ++ GY R G + + LR M E + N+VV+NS++
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTL 319
Query: 368 -------------HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN 414
G+ + +VL+ M + ++ D +Y+ + GY+ +A ++
Sbjct: 320 TLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFK 379
Query: 415 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 474
+++K + DA + +IL ++ ++I P+V TVI G C G
Sbjct: 380 EMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNG 438
Query: 475 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFN 533
+ + A+R++N M K PN+ + + + G ++ A+ ++ +R + + +TF
Sbjct: 439 SMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFL 498
Query: 534 TLISGYSNSGQIDEA 548
L + +G DE+
Sbjct: 499 LLAEAWRVAGLTDES 513
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 163/392 (41%), Gaps = 66/392 (16%)
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA---RWGSLEESLRLC 343
S ++N ++G A+ V + + G PS+ +Y TL+ ++GS+ +
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS---IV 103
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
E+ + G + + +N+++ G+ME+A + L M + + P +Y L +G
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
G + +L DL+ + ++++ P++ T
Sbjct: 164 GKPERSSEL------LDLMLEEGNVDV--------------------------GPNIRTF 191
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE--- 520
++ CK E+A + M + +P+ YN+ + T A++ V E
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 521 LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN----LLCK 576
++++ + T ++ GY G++ + MK + + AN V +N+LIN ++ +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 577 NGCDE-----------EAKEL-----MKMMIMQ-----GIRPDCITYTTLITHFNKKHHP 615
+G DE E EL MK+ ++ ++ D ITY+T++ ++ +
Sbjct: 312 DGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYM 371
Query: 616 EEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
E+ + M+ GV PD Y + ++ A
Sbjct: 372 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRA 403
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 193/480 (40%), Gaps = 90/480 (18%)
Query: 7 PFKFRSIFFRAFHAGKRFSNPTAAAEDIIFRAICVHLKHRRWSAL----EQLSPKLTTFM 62
P + +++F G R P+ + + A+ V ++ S++ EQ KL +
Sbjct: 61 PHEAQTVFKTLAETGHR---PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIF 117
Query: 63 VNRVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKE 122
N V++ F S ++ ++ + + ++ +N S LI
Sbjct: 118 FNAVINAFSESGNME------------DAVQALLKMKELGLNP-----TTSTYNTLIKGY 160
Query: 123 GIA-----PLELLEALMDESYQHC-PAV--FDALVRACTQVGATEGAYDVICELRTRGCL 174
GIA ELL+ +++E P + F+ LV+A + E A++V+ ++ G
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 175 VSVHAWNNFLSHLVEVNDIDRFWR--LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAI 232
+N + V+ + R + K + N T + + C+E RV + +
Sbjct: 221 PDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGL 280
Query: 233 TVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD------LALKVM-----------KKMN- 274
+ RM + N+V FN +I+G + D L L +M +KM
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKV 340
Query: 275 ----LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
LM +V + ++Y++++N + G + A +V +MVKAG +P Y+ L GY
Sbjct: 341 QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 331 AR-------------------------------W---GSLEESLRLCDEMVERGLFPNIV 356
R W GS+++++R+ ++M + G+ PNI
Sbjct: 401 VRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIK 460
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
+ ++++ +A +VL M + P+ ++ +L E G E+ K N +
Sbjct: 461 TFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 520
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 180/435 (41%), Gaps = 69/435 (15%)
Query: 210 ENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKV 269
+ V +N + + + +A ++ M + G P+++SFN +I+ K+G L L V
Sbjct: 223 DRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAV 282
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
+ ++++ + + P++++YN++++ + L A +V DM +P + TY +I
Sbjct: 283 -ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISV 341
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
Y R G E+ RL E+ +G FP+ V YNS+LY R + E+ +V M D
Sbjct: 342 YGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD 401
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFD-LIEDAFSLNILLNYICKSXXXXXXXXXX 448
+ +Y + + G L AL+L+ + DA + +L++ + K+
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGN--------------------------------- 475
M+ G+ P + T + +I G K G
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 476 --TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM-ASTDVAKNLVD------------- 519
T KA LY MI P+ T+Y I GL K S D+ K + D
Sbjct: 522 NETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEIS 581
Query: 520 ---------ELRKRKL---------LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+L R+L L+ T +++ YS+SG+ EAF L +K
Sbjct: 582 SVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASG 641
Query: 562 ANRVTYNTLINLLCK 576
+ R+ LI L CK
Sbjct: 642 SKRLITEALIVLHCK 656
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/536 (21%), Positives = 234/536 (43%), Gaps = 27/536 (5%)
Query: 123 GIAP---LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
G+ P +ELL+ + + + ++ L+ AC++ +GA V ++ C +
Sbjct: 275 GLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWT 334
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYR-M 238
+N +S RL+ + G + T+N +YA +E R E + +Y+ M
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARE-RNTEKVKEVYQQM 393
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
K G + +++N II K G LDLAL++ K M ++G + P++++Y +I+ K
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSLGKA 451
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
+ A ++ +M+ G +P+++TY+ LI GYA+ G EE+ M+ G P+ + Y
Sbjct: 452 NRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 511
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC---RNGYLTEALKLHNQ 415
+ +L L R + +A + DMI P Y ++ GL R+ + + ++ +
Sbjct: 512 SVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+ + +E + + + K IT G + T +++ G
Sbjct: 572 LCGMNPLE-------ISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGR 624
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL------DA 529
+A L + + I + I CK+ + A +DE + +
Sbjct: 625 HSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAA---LDEYFADPCVHGWCFGSS 681
Query: 530 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 589
T + TL+ + EA + ++++ G A+ +++ + CK G E A +++
Sbjct: 682 TMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQ 741
Query: 590 MIMQGIRPDCIT-YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+G C YT +I + K+ ++ ++ + G PD KT++++++ +
Sbjct: 742 AETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAY 797
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 170/402 (42%), Gaps = 45/402 (11%)
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
PN I+ + LA+++ + G+ V YN+++ + + G A
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQ----VYNAMMGVYSRSGKFSKA 244
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL--RLCDEMVERGLFPNIVVYNSIL 362
+E++ M + G P + ++ TLI+ + G L +L L D + GL P+ + YN++L
Sbjct: 245 QELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLL 304
Query: 363 YWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
R +++ A KV DM + H C PD ++Y + R G EA +L ++ +L
Sbjct: 305 SACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVYGRCGLAAEAERL---FMELEL 360
Query: 422 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 481
+G PD T +++ + NTEK
Sbjct: 361 --------------------------------KGFFPDAVTYNSLLYAFARERNTEKVKE 388
Query: 482 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR--KRKLLDATTFNTLISGY 539
+Y M KM + YN+ I+ K D+A L +++ + DA T+ LI
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 540 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
+ + EA L +EM +G+ TY+ LI K G EEA++ M+ G +PD
Sbjct: 449 GKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDN 508
Query: 600 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ Y+ ++ + + + L+ MI G P Y+ ++
Sbjct: 509 LAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 147/335 (43%), Gaps = 11/335 (3%)
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERG---LFPNIVVYNSILYWLYRHGDMEEA 374
P+ R A ++ RW +ESL + E+ R + + VYN+++ R G +A
Sbjct: 189 PNARMVAAILGVLGRWN--QESLAV--EIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKA 244
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE--ALKLHNQILKFDLIEDAFSLNILL 432
+++ M + PD S+ L ++G LT A++L + + L DA + N LL
Sbjct: 245 QELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLL 304
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
+ + M PD++T +I + G +A RL+ +
Sbjct: 305 SACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFF 364
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 551
P+ YNS + + +T+ K + +++K D T+NT+I Y GQ+D A L
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQL 424
Query: 552 TTEMKSL-GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 610
+MK L G + + +TY LI+ L K EA LM M+ GI+P TY+ LI +
Sbjct: 425 YKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYA 484
Query: 611 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
K EE M+ G PD Y ++ L
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 168/364 (46%), Gaps = 7/364 (1%)
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
CK G + A +V+ + T + S Y II + K+ AE V+G++ ++G
Sbjct: 727 CKLGFPETAHQVVNQAE--TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRT 784
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
P ++T+ +L+ YA+ G E + + + M+ G P + N +L+ L G +EE V
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
+ ++ D + S ++ + R G + E K+++ + + +++ +CK
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
M ++ +++ + + +K +++Y + + +P+ T
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT 964
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKL---LDATTFNTLISGYSNSGQIDEAFGLTTE 554
YN+ I C+ + L+ ++R L LD T+ +LIS + +++A L E
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLD--TYKSLISAFGKQKCLEQAEQLFEE 1022
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
+ S GL +R Y+T++ + +G D +A++L++MM GI P T L+ ++ +
Sbjct: 1023 LLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGN 1082
Query: 615 PEEV 618
P+E
Sbjct: 1083 PQEA 1086
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 146/340 (42%), Gaps = 2/340 (0%)
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL-FPNIVVYNSIL 362
A +V D+ +G E S +++ Y + G E + ++ ++ +G F +Y I+
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDII 759
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
+ ++A V+ ++ PD ++ L + G A + N +++
Sbjct: 760 EAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPS 819
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
S+NILL+ +C + G + ++D + GN + ++
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSN 541
Y+ M P + +Y I LCK A+ +V E+ + ++ +N+++ Y+
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
+ + +K GL + TYNTLI + C++ EE LM+ M G+ P T
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 602 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
Y +LI+ F K+ E+ L + ++ KG+ D+ Y ++
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/489 (19%), Positives = 206/489 (42%), Gaps = 56/489 (11%)
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVH-AWNNFLSHLVEVNDIDRFWR--- 198
+V ++V ++G E A+ V+ + T+G H A + + ++E + W+
Sbjct: 717 SVCKSMVVVYCKLGFPETAHQVVNQAETKG----FHFACSPMYTDIIEAYGKQKLWQKAE 772
Query: 199 -LYKGMGSFGHVENVNTFN--LAIYALCKECRVVEAITVIYR-MLKDGTFPNVVSFNMII 254
+ + G ++ T+N ++ YA +C E I+ M++DG P V S N+++
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYA---QCGCYERARAIFNTMMRDGPSPTVESINILL 829
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
C G L+ V++++ M G + +S+ +++ F + G + +++ M A
Sbjct: 830 HALCVDGRLEELYVVVEELQDM-GFKISKSSILL--MLDAFARAGNIFEVKKIYSSMKAA 886
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
G+ P++R Y +I+ + + ++ + EM E + ++NS+L D ++
Sbjct: 887 GYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKT 946
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
+V + + + PD+ +Y L CR+ E L Q
Sbjct: 947 VQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQ------------------- 987
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
M GL P + T ++I K E+A +L+ ++ + +
Sbjct: 988 ----------------MRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT--TFNTLISGYSNSGQIDEAFGLT 552
+ Y++ + + + + +D + ++ K ++ T T + L+ YS+SG EA +
Sbjct: 1032 RSFYHTMMK-ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVL 1090
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
+ +K + + Y+++I+ ++ E + M +G+ PD +T + +
Sbjct: 1091 SNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFS 1150
Query: 613 HHPEEVIAL 621
EV+ L
Sbjct: 1151 KEKIEVMLL 1159
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 188/398 (47%), Gaps = 15/398 (3%)
Query: 195 RFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
RF++ + + H +V +++ I + K R + + + ++ NV +F +++
Sbjct: 119 RFFQWSEKQRHYEH--SVRAYHMMIESTAK-IRQYKLMWDLINAMRKKKMLNVETFCIVM 175
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
+ +D A+ N+M + PN V++N +++ CK + A+EV +M +
Sbjct: 176 RKYARAQKVDEAIYAF---NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RD 231
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
F P +TY+ L++G+ + +L ++ + EM++ G P+IV Y+ ++ L + G ++EA
Sbjct: 232 RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEA 291
Query: 375 SKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 433
++ M D IC P + Y++L L EA+ ++ + + D N L+
Sbjct: 292 LGIVRSM-DPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIG 350
Query: 434 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 493
CK+ M ++G+ P+ + ++ + G ++A ++ MIK+ E P
Sbjct: 351 AFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE-P 409
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLT 552
+ Y I C+ + A + +RK+ + + TF+ LI+G +A L
Sbjct: 410 DADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLL 469
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
EM +G+ + VT+ L LL K EE ++++K +
Sbjct: 470 EEMIEMGIRPSGVTFGRLRQLLIK----EEREDVLKFL 503
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 146/324 (45%), Gaps = 38/324 (11%)
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+V T+ ++ YAR ++E++ + M + L PN+V +N +L L + ++ +A +V
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
+M D+ PD +Y+IL EG + L +A ++ +
Sbjct: 227 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFRE----------------------- 262
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
MI G PD+ T + ++D CK G ++AL + M +P IY
Sbjct: 263 ------------MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
+ ++ + A + E+ + + D FN+LI + + ++ + + EMKS
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
G++ N + N ++ L + G +EA ++ + MI + PD TYT +I F +K E
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMET 429
Query: 618 VIALHDYMILKGVIPDQKTYDAIV 641
+ YM KGV P T+ ++
Sbjct: 430 ADKVWKYMRKKGVFPSMHTFSVLI 453
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 209/476 (43%), Gaps = 60/476 (12%)
Query: 49 SALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSR 106
SAL+Q +++ +V V++ F N+ L F+ W + HS+ + +++ R
Sbjct: 89 SALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIR 148
Query: 107 WFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVIC 166
+ L+ N + K+ + +E +M Y V +A+ A++V+
Sbjct: 149 QYKLMWDLI-NAMRKKKMLNVETFCIVM-RKYARAQKVDEAIY-----------AFNVME 195
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKEC 226
+ LV A+N LS L + ++ + +++ M + T+++ + KE
Sbjct: 196 KYDLPPNLV---AFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEP 251
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
+ +A V M+ G P++V++++++D CK G +D AL +++ M+ + P +
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMD---PSICKPTTF 308
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
Y+ +++ + + L A + +M ++G + V + +LI + + ++ R+ EM
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCRNGY 405
+G+ PN N IL L G+ +EA V MI +C PD +Y ++ + C
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI--KVCEPDADTYTMVIKMFCEKKE 426
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
+ A +++ K+ M +G+ P ++T +
Sbjct: 427 META----DKVWKY-------------------------------MRKKGVFPSMHTFSV 451
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
+I+G C+ T+KA L MI+M +P+ + L K DV K L +++
Sbjct: 452 LINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 5/255 (1%)
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
++ I+ R + EA+ N + K+DL + + N LL+ +CKS +M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 452 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 511
R PD T + +++G K N KA ++ MI P++ Y+ ++ LCK
Sbjct: 230 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 512 DVAKNLVDELRKRKLLDATTF--NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
D A +V + + TTF + L+ Y +++EA EM+ G+ A+ +N+
Sbjct: 289 DEALGIVRSMDP-SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNS 347
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
LI CK + ++K M +G+ P+ + ++ H ++ +E + MI K
Sbjct: 348 LIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KV 406
Query: 630 VIPDQKTYDAIVTPF 644
PD TY ++ F
Sbjct: 407 CEPDADTYTMVIKMF 421
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 92/189 (48%)
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
+V T V+ + ++A+ +N M K D PNL +N ++ LCK + A+ +
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 519 DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
+ +R R D+ T++ L+ G+ + +A + EM G + VTY+ ++++LCK G
Sbjct: 227 ENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAG 286
Query: 579 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 638
+EA +++ M +P Y+ L+ + ++ EE + M G+ D ++
Sbjct: 287 RVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFN 346
Query: 639 AIVTPFLLA 647
+++ F A
Sbjct: 347 SLIGAFCKA 355
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
Y+ I K+ + +L++ +RK+K+L+ TF ++ Y+ + ++DEA M+
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEK 196
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
L N V +N L++ LCK+ +A+E+ + M PD TY+ L+ + K+ + +
Sbjct: 197 YDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPK 255
Query: 618 VIALHDYMILKGVIPDQKTYDAIV 641
+ MI G PD TY +V
Sbjct: 256 AREVFREMIDAGCHPDIVTYSIMV 279
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 172/408 (42%), Gaps = 11/408 (2%)
Query: 244 FPNVVSFN---MIIDGACKTGSLDLALKVMKKMNLMTGNSVW--PNSVSYNSIINGFCKK 298
F N +S N ++ G +L++ K M +W PN Y +I+ ++
Sbjct: 99 FKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQ----RQIWCKPNEHIYTIMISLLGRE 154
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
G L EV +M G SV +Y LI+ Y R G E SL L D M + P+I+ Y
Sbjct: 155 GLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTY 214
Query: 359 NSILYWLYRHG-DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
N+++ R G D E + ++M + I PD +Y L G EA + +
Sbjct: 215 NTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN 274
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
++ D + + L+ K G M + G PD+ + +++ K G+ +
Sbjct: 275 DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIK 334
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLI 536
+A+ +++ M PN Y+ +N + D + L E++ DA T+N LI
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
+ G E L +M + + TY +I K G E+A+++++ M I
Sbjct: 395 EVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIV 454
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
P YT +I F + EE + + M G P +T+ +++ F
Sbjct: 455 PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 199/463 (42%), Gaps = 7/463 (1%)
Query: 173 CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAI 232
C + H + +S L +D+ ++ M S G +V ++ I A + R ++
Sbjct: 137 CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 196
Query: 233 TVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII 292
++ RM + P+++++N +I+ AC G LD ++ M + P+ V+YN+++
Sbjct: 197 ELLDRMKNEKISPSILTYNTVIN-ACARGGLDWE-GLLGLFAEMRHEGIQPDIVTYNTLL 254
Query: 293 NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 352
+ +G AE V M G P + TY+ L++ + + LE+ L EM G
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 353 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 412
P+I YN +L + G ++EA V M P+ +Y++L ++G + +L
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 413 HNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 472
++ + DA + NIL+ + M+ + PD+ T +I K
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 473 LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD---VAKNLVDELRKRKLLDA 529
G E A ++ M D P+ Y I + A + VA N + E+ ++
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE- 493
Query: 530 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 589
TF++L+ ++ G + E+ + + + G+ NR T+N I + G EEA +
Sbjct: 494 -TFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 590 MIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
M PD T +++ ++ +E + M ++P
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 198/460 (43%), Gaps = 11/460 (2%)
Query: 127 LELLEALMDESYQHCPAVFDALVRACTQVGAT-EGAYDVICELRTRGCLVSVHAWNNFLS 185
LELL+ + +E ++ ++ AC + G EG + E+R G + +N LS
Sbjct: 196 LELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 186 HLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFP 245
D +++ M G V ++ T++ + K R+ + ++ M G+ P
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
++ S+N++++ K+GS+ A+ V +M PN+ +Y+ ++N F + G
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQ---AAGCTPNANTYSVLLNLFGQSGRYDDVR 372
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
++ +M + +P TY LI+ + G +E + L +MVE + P++ Y I++
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ G E+A K+L M I P +Y + E + EAL N + +
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
+ + LL + ++ G+P + T I+ + G E+A++ Y
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT-FNTLISGYSNSGQ 544
M K P+ + ++ D + +E++ +L + + +++ Y + +
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTER 612
Query: 545 IDEAFGLTTEMKSLGLSANRVT-YNTLINLLCKNGCDEEA 583
D+ L EM S NRV+ + +I + K D+++
Sbjct: 613 WDDVNELLEEMLS-----NRVSNIHQVIGQMIKGDYDDDS 647
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/489 (20%), Positives = 205/489 (41%), Gaps = 13/489 (2%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
++ ++ + G + +V E+ ++G SV ++ ++ + L M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIY-RMLKDGTFPNVVSFNMIIDGACKTGS 262
+ ++ T+N I A + E + ++ M +G P++V++N ++ G
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
D A V + MN + P+ +Y+ ++ F K L ++LG+M G P + +
Sbjct: 263 GDEAEMVFRTMN---DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
Y L++ YA+ GS++E++ + +M G PN Y+ +L + G ++ ++ +M
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
+ PD +Y IL E GY E + L + +++ ++ D + ++ K
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M + P VI+ + E+AL +N M ++ P++ ++S +
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 503 -----NGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
GL K S + LVD R + TFN I Y G+ +EA +M+
Sbjct: 500 YSFARGGLVK-ESEAILSRLVDSGIPR---NRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
+ T ++++ +E +E + M I P + Y ++ + K ++
Sbjct: 556 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDD 615
Query: 618 VIALHDYMI 626
V L + M+
Sbjct: 616 VNELLEEML 624
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 140/296 (47%), Gaps = 1/296 (0%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ GF+ TY T++ R E +L DEMV G PN V YN +++ R ++
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
EA V + M + PD+ +Y L + + G+L A+ ++ ++ + L D F+ ++++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
N + K+ M+ +G P++ T +I + K N E AL+LY M Q
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGL 551
P+ Y+ + L + A+ + E+ RK + D + L+ + +G +D+A+
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 552 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
M GL N T N+L++ + EA L++ M+ G+ P TYT L++
Sbjct: 592 YQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 197/455 (43%), Gaps = 11/455 (2%)
Query: 172 GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEA 231
G + + N L + + F+ K F H + +T+ + L + + E
Sbjct: 321 GFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKH--DGHTYTTMVGNLGRAKQFGEI 378
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSI 291
++ M++DG PN V++N +I + L A+ V N M P+ V+Y ++
Sbjct: 379 NKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF---NQMQEAGCEPDRVTYCTL 435
Query: 292 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
I+ K G L +A ++ M +AG P TY+ +I+ + G L + RL EMV +G
Sbjct: 436 IDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGC 495
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
PN+V +N ++ + + E A K+ DM + PD+ +Y+I+ E L G+L EA
Sbjct: 496 TPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEG 555
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 471
+ ++ + + + D +L++ K+ +M+ GL P+V T +++
Sbjct: 556 VFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL 615
Query: 472 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT 531
++ +A L M+ + P+L Y ++ C A ++ +L A
Sbjct: 616 RVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS-CCTDARSNFDMGFCGQLMAVSGHPAHM 674
Query: 532 FNTLISGYSNSGQI--DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 589
F + GQ D M S + R + +++ L K+G EEA + ++
Sbjct: 675 FLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEV 734
Query: 590 MIMQGIRPDCI---TYTTLITHFNKKHHPEEVIAL 621
+ + PD + +Y+ + + + VIAL
Sbjct: 735 AAGKNVYPDALREKSYSYWLINLHVMSEGTAVIAL 769
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 34/289 (11%)
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
Y +++ L R E +K+L +M+ P+ +Y L R YL EA+ + NQ+
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 417 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 476
+ D + L++ K+ M GL PD +T + +I+ K G+
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 536
A RL+ C+M NLV TFN +I
Sbjct: 481 PAAHRLF----------------------CEMVGQGCTPNLV------------TFNIMI 506
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
+ ++ + + A L +M++ G ++VTY+ ++ +L G EEA+ + M +
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
PD Y L+ + K + ++ + M+ G+ P+ T +++++ FL
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL 615
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G D +T T++ + + +L + M++ +PN YN I+ + A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 515 KNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
N+ +++++ D T+ TLI ++ +G +D A + M+ GLS + TY+ +IN
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
L K G A L M+ QG P+ +T+ +I K + E + L+ M G PD
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 634 QKTYDAIV 641
+ TY ++
Sbjct: 534 KVTYSIVM 541
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 156/366 (42%), Gaps = 32/366 (8%)
Query: 22 KRFSNPTAAAEDIIFRAICVHLKHRRWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFY 81
++ NP E++ H AL ++ + N+V+ + N + AL F+
Sbjct: 288 RQHCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYAN-ALGFF 346
Query: 82 NWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESY- 138
W+ F H H+ T++ L ++ F E L+ ++ ++G P + + SY
Sbjct: 347 YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMV-RDGCKPNTVTYNRLIHSYG 405
Query: 139 -----QHCPAVFDALVRA---------CT------QVGATEGAYDVICELRTRGCLVSVH 178
+ VF+ + A CT + G + A D+ ++ G
Sbjct: 406 RANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTF 465
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
++ ++ L + + RL+ M G N+ TFN+ I AL + R E +YR
Sbjct: 466 TYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI-ALHAKARNYETALKLYRD 524
Query: 239 LKDGTF-PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVW-PNSVSYNSIINGFC 296
+++ F P+ V+++++++ G L+ A V +M W P+ Y +++ +
Sbjct: 525 MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN----WVPDEPVYGLLVDLWG 580
Query: 297 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 356
K G + A + M++AG P+V T +L+ + R + E+ L M+ GL P++
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640
Query: 357 VYNSIL 362
Y +L
Sbjct: 641 TYTLLL 646
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 118/220 (53%), Gaps = 3/220 (1%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L+ M G NV T+N I + C R +A ++ M++ P++V+F+ +I+
Sbjct: 32 LFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFV 91
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K + A ++ K+M S++P +++YNS+I+GFCK+ + A+ +L M G P
Sbjct: 92 KERKVSEAEEIYKEMLRW---SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
V T++TLI+GY + ++ + + EM RG+ N V Y ++++ + GD++ A +L
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
++MI + PD ++ + GLC L +A + + K
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
M ++ + V ++D + G+ + L EM E+G+FPN++ YN ++ G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
+A ++L MI+K I PD +++ L + ++EA +++ ++L++ + + N
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
+++ CK SM ++G PDV T +T+I+G CK + + ++ M +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 549
N Y + I+G C++ D A++L++E+ + D TF+ +++G + ++ +AF
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 550 GLTTEMK 556
+ +++
Sbjct: 241 AILEDLQ 247
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 440
M HI D + + LC++G A L ++ + + + + N +++ C S
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 441 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 500
MI + + PD+ T + +I+ K +A +Y M++ P YNS
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 501 FINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 559
I+G CK D AK ++D + + D TF+TLI+GY + ++D + EM G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 560 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 619
+ AN VTY TLI+ C+ G + A++L+ MI G+ PD IT+ ++ K +
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 620 AL 621
A+
Sbjct: 241 AI 242
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 120/250 (48%)
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
M + + + V +I++ CK G + A+ + +M + G P+V TY +ID + G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
++ +L M+E+ + P+IV +++++ + + EA ++ +M+ I P +Y
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ +G C+ + +A ++ + + D + + L+N CK+ M RG
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
+ + T T+I G C++G+ + A L N MI P+ ++ + GLC A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 516 NLVDELRKRK 525
++++L+K +
Sbjct: 241 AILEDLQKSE 250
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
+++ +CK M +G+ P+V T +ID C G A +L MI+
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAF 549
P++ +++ IN K A+ + E+ + + T T+N++I G+ ++D+A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 550 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
+ M S G S + VT++TLIN CK + E+ M +GI + +TYTTLI F
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTY 637
+ + L + MI GV PD T+
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITF 223
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
+ DV ++D CK GN A L+ M + PN+ YN I+ C A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 516 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
L+ + ++++ D TF+ LI+ + ++ EA + EM + +TYN++I+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
CK ++AK ++ M +G PD +T++TLI + K + + + M +G++ +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 635 KTYDAIVTPF 644
TY ++ F
Sbjct: 186 VTYTTLIHGF 195
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 19/228 (8%)
Query: 87 LFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFD 146
+FP+ L +C + + RW ++A L+R++I K+ I P F
Sbjct: 41 IFPNVLTYNCMIDSFCHSGRW-SDADQLLRHMIEKQ-INPD--------------IVTFS 84
Query: 147 ALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSF 206
AL+ A + A ++ E+ + +N+ + + + +D R+ M S
Sbjct: 85 ALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK 144
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
G +V TF+ I CK RV + + M + G N V++ +I G C+ G LD A
Sbjct: 145 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 204
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
+ +N M V P+ ++++ ++ G C K L A +L D+ K+
Sbjct: 205 QDL---LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 492 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 550
+ ++ I + ++ LCK + A+NL E+ ++ + + T+N +I + +SG+ +A
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 551 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 610
L M ++ + VT++ LIN K EA+E+ K M+ I P ITY ++I F
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 611 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
K+ ++ + D M KG PD T+ ++ + A
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA 163
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 4/308 (1%)
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
P+ ++N++I G ++G D ALK+ +M V P V++ ++I+G CK + A
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEM---VKKKVKPTGVTFGTLIHGLCKDSRVKEA 206
Query: 305 EEVLGDMVKA-GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
++ DM+K G P+V YA+LI + G L + +L DE E + + +Y++++
Sbjct: 207 LKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
L + G E S +L +M +K PD +Y +L G C A ++ +++++ L
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
D S N++L + M RG PD + V DG C+ E+A +
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVIL 386
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSG 543
+ M+ +P F+ LC+ ++ ++ L + DA ++ +I
Sbjct: 387 DEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEP 446
Query: 544 QIDEAFGL 551
I ++ L
Sbjct: 447 VISDSIDL 454
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 148/322 (45%), Gaps = 38/322 (11%)
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
P+ + +I+ + R +L + DEM + + NS+L L + G++E+ +
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
LS ID+ PD +Y IL G ++G +ALKL ++
Sbjct: 141 LSS-IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDE---------------------- 177
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM-DEQPNLT 496
M+ + + P T T+I G CK ++AL++ + M+K+ +P +
Sbjct: 178 -------------MVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVH 224
Query: 497 IYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEM 555
IY S I LC++ A L DE + K+ +DA ++TLIS +G+ +E + EM
Sbjct: 225 IYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEM 284
Query: 556 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 615
G + VTYN LIN C E A ++ M+ +G++PD I+Y ++ F +
Sbjct: 285 SEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKW 344
Query: 616 EEVIALHDYMILKGVIPDQKTY 637
EE L + M +G PD +Y
Sbjct: 345 EEATYLFEDMPRRGCSPDTLSY 366
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 129/278 (46%), Gaps = 5/278 (1%)
Query: 214 TFNLAIYALCKECRVVEAITVIYRMLKD-GTFPNVVSFNMIIDGACKTGSLDLALKVMKK 272
TF I+ LCK+ RV EA+ + + MLK G P V + +I C+ G L A K+ K
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKL--K 246
Query: 273 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 332
G + ++ Y+++I+ K G +L +M + G +P TY LI+G+
Sbjct: 247 DEAYEGK-IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCV 305
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
E + R+ DEMVE+GL P+++ YN IL +R EEA+ + DM + PD S
Sbjct: 306 ENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLS 365
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
Y I+ +GLC EA + +++L L L +C+S S+
Sbjct: 366 YRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL- 424
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
RG+ D + +I CK ++ L +K D
Sbjct: 425 HRGIAGDADVWSVMIPTMCKEPVISDSIDLLLNTVKED 462
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 138/284 (48%), Gaps = 3/284 (1%)
Query: 297 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 356
K G L +E L + + G +P TY LI G ++ G +++L+L DEMV++ + P V
Sbjct: 130 KCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
+ ++++ L + ++EA K+ DM+ + + P + YA L + LC+ G L+ A KL ++
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE 248
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+ + DA + L++ + K+ M +G PD T +I+G C +
Sbjct: 249 AYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEND 308
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNT 534
+E A R+ + M++ +P++ YN + ++ + A L +++ +R D ++
Sbjct: 309 SESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRI 368
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
+ G Q +EA + EM G R + LC++G
Sbjct: 369 VFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESG 412
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
PD T +I G + G + AL+L++ M+K +P + + I+GLCK + A +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 518 VDELRKRKLLDATT--FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
++ K + T + +LI G++ AF L E + + Y+TLI+ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 635
K G E +++ M +G +PD +TY LI F ++ E + D M+ KG+ PD
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 636 TYDAIVTPFL 645
+Y+ I+ F
Sbjct: 330 SYNMILGVFF 339
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 126/324 (38%), Gaps = 53/324 (16%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVG 156
TL+ L EAL + +++ G+ P ++ +L++A Q+G
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPT--------------VHIYASLIKALCQIG 237
Query: 157 ATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFN 216
A+ + E V ++ +S L++ + + + M G + T+N
Sbjct: 238 ELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYN 297
Query: 217 LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
+ I C E A V+ M++ G P+V+S+NMI+ + + A + + M
Sbjct: 298 VLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFED---M 354
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
P+++SY + +G C+ GL
Sbjct: 355 PRRGCSPDTLSYRIVFDGLCE--GL---------------------------------QF 379
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
EE+ + DEM+ +G P L L G +E SKV+S + + I D ++++
Sbjct: 380 EEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADVWSVM 438
Query: 397 TEGLCRNGYLTEALKLHNQILKFD 420
+C+ +++++ L +K D
Sbjct: 439 IPTMCKEPVISDSIDLLLNTVKED 462
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 192/438 (43%), Gaps = 33/438 (7%)
Query: 172 GCLV---SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRV 228
G LV + WN +S ++E W Y+ +F ++ F + I A K
Sbjct: 115 GTLVRFKQLKKWN-LVSEILE-------WLRYQNWWNFSEID----FLMLITAYGKLGNF 162
Query: 229 VEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY 288
A V+ + K G+ PNV+S+ +++ + G + A + ++M + P++++Y
Sbjct: 163 NGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ---SSGPEPSAITY 219
Query: 289 NSIINGFCKKGGLLLAEEV---LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
I+ F + AEEV L D K+ +P + Y +I Y + G+ E++ ++
Sbjct: 220 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 279
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
MV +G+ + V YNS++ + +E SK+ M I PD SYA+L + R
Sbjct: 280 MVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR 336
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
EAL + ++L + + NILL+ S SM + PD+++ T
Sbjct: 337 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTT 396
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
++ + E A + + IK+D +PN+ Y + I G K + + +++R
Sbjct: 397 MLSAYVNASDMEGAEKFFK-RIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLS 455
Query: 525 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ + T T++ A G EM+S G+ ++ N L++L EEA
Sbjct: 456 GIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 515
Query: 584 KELMKMMIMQGIRPDCIT 601
KEL GIR + T
Sbjct: 516 KELT------GIRNETAT 527
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 154/380 (40%), Gaps = 50/380 (13%)
Query: 267 LKVMKKMNLMTGNSVWP--------NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K +KK NL++ W + + + +I + K G AE VL + K G P
Sbjct: 120 FKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTP 179
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+V +Y L++ Y R G + + M G P+ + Y IL +EA +V
Sbjct: 180 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 239
Query: 379 SDMIDKH---ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
++D+ + PDQ Y ++ + G +A K+ + ++ + + + N L+++
Sbjct: 240 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF- 298
Query: 436 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 495
M + PDV + A +I + E+AL ++ M+ +P
Sbjct: 299 --ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 356
Query: 496 TIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTE 554
YN ++ + AK + +R+ ++ D ++ T++S Y N+ +
Sbjct: 357 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM--------- 407
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
E A++ K + + G P+ +TY TLI + K +
Sbjct: 408 --------------------------EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 441
Query: 615 PEEVIALHDYMILKGVIPDQ 634
E+++ +++ M L G+ +Q
Sbjct: 442 VEKMMEVYEKMRLSGIKANQ 461
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN----SFINGLCKMAS 510
G P+V + +++ + G A ++ M +P+ Y +F+ G +
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 511 TDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 570
+V + L+DE + D ++ +I Y +G ++A + + M G+ + VTYN+L
Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 295
Query: 571 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 630
++ +E ++ M I+PD ++Y LI + + EE +++ + M+ GV
Sbjct: 296 MSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 631 IPDQKTYDAIVTPFLLA 647
P K Y+ ++ F ++
Sbjct: 353 RPTHKAYNILLDAFAIS 369
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 204/485 (42%), Gaps = 40/485 (8%)
Query: 192 DIDRFWRLYKGM--------GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGT 243
D+D L+K M SFG ++ T+N I+ LC + +A+ V + G
Sbjct: 263 DLDAALSLFKEMKERSSVYGSSFG--PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGH 320
Query: 244 FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 303
P+ ++ ++I G CK+ +D A+++ +M N P+++ YN +++G K +
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQY---NGFVPDTIVYNCLLDGTLKARKVTE 377
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A ++ MV+ G S TY LIDG R G E L ++ ++G F + + ++ +
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGL 437
Query: 364 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 423
L R G +E A K++ +M + D + + L G + G KL I + +L+
Sbjct: 438 QLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVP 497
Query: 424 DAFSLNI-----LLNYICKSXXXXXXXXXXGSMI-----------------TRGLPPDVY 461
+ N L K GS + + D +
Sbjct: 498 NVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPW 557
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN---LTIYNSFINGLCKMASTDVAKNLV 518
+ + +D N K L +++ +P+ + + N+F++ +A L
Sbjct: 558 SSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLF 617
Query: 519 DELRKRKLLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
+ + D T T+N+++S + G A G+ +M +A+ TYN +I L K
Sbjct: 618 EIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGK 677
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
G + A ++ + QG D + Y TLI K +E L D+M G+ PD +
Sbjct: 678 MGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVS 737
Query: 637 YDAIV 641
Y+ ++
Sbjct: 738 YNTMI 742
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 215/479 (44%), Gaps = 35/479 (7%)
Query: 140 HCP--AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFW 197
H P + + L++ C + + A + E++ G + +N L ++ +
Sbjct: 320 HEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEAC 379
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
+L++ M G + T+N+ I L + R T+ + K G F + ++F+++
Sbjct: 380 QLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQL 439
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
C+ G L+ A+K++++M G SV + V+ +S++ GF K+G E+++ + +
Sbjct: 440 CREGKLEGAVKLVEEME-TRGFSV--DLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLV 496
Query: 318 PSVRTYATLIDGYARWGS-LEESLRLCDEMVE--RGLFPNIVVYNSILYWLYRHGDMEEA 374
P+V RW + +E SL+ + +FP+ + I+ + D A
Sbjct: 497 PNV----------LRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASA 546
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN- 433
+V S M D D +S + + L + L + + + D+F ++++
Sbjct: 547 EEV-SPMED-----DPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTF 600
Query: 434 ---YICK---SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
Y+ K S G +T YT +++ K G + A + + M
Sbjct: 601 LSIYLSKGDLSLACKLFEIFNGMGVT---DLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK-LLDATTFNTLISGYSNSGQID 546
+ ++ YN I GL KM D+A ++D L K+ LD +NTLI+ + ++D
Sbjct: 658 ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD 717
Query: 547 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
EA L MKS G++ + V+YNT+I + K G +EA + +K M+ G P+ +T T L
Sbjct: 718 EATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 195/456 (42%), Gaps = 37/456 (8%)
Query: 74 PHLALDFYNWVGMLFPHSLHSSCTLLQV---LVNSRWFTEALSLMRNLIAKEGIAPLELL 130
P LDF+ W L P HS+ Q+ + + E L+ ++ ++G+ + +
Sbjct: 71 PSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSM-KEDGVNLDQTM 129
Query: 131 EALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEV 190
++ D+L+R+ G E A V+ + G ++ +++ L LV+
Sbjct: 130 AKIL----------LDSLIRS----GKFESALGVLDYMEELGDCLNPSVYDSVLIALVKK 175
Query: 191 NDID-RFWRLYKGM-GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+++ L+K + S H ++ + + L V E + + R F V
Sbjct: 176 HELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVF 235
Query: 249 --------------SFNMIIDGACKTGSLDLAL---KVMKKMNLMTGNSVWPNSVSYNSI 291
S+N+ I G G LD AL K MK+ + + G+S P+ +YNS+
Sbjct: 236 EKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSL 295
Query: 292 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
I+ C G A V ++ +G EP TY LI G + +++++R+ EM G
Sbjct: 296 IHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGF 355
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
P+ +VYN +L + + EA ++ M+ + + ++Y IL +GL RNG
Sbjct: 356 VPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFT 415
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 471
L + K DA + +I+ +C+ M TRG D+ T ++++ G
Sbjct: 416 LFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFH 475
Query: 472 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
K G + +L + + + PN+ +N+ + K
Sbjct: 476 KQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLK 511
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/490 (20%), Positives = 197/490 (40%), Gaps = 70/490 (14%)
Query: 138 YQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFW 197
Y+H + + R + G D++ ++ G + L L+ +
Sbjct: 88 YKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESAL 147
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
+ M G N + ++ + AL K+ + A+++++++L+ S N D
Sbjct: 148 GVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLE-------ASDNHSDD-- 198
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK---KGGLLLAEEVLGDMVKA 314
TG + + S P +V+ N ++ G + + E L M +
Sbjct: 199 -DTGRVIIV-------------SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRF 244
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG------LFPNIVVYNSILYWLYRH 368
F+ +Y I G+ WG L+ +L L EM ER P+I YNS+++ L
Sbjct: 245 KFD--TWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLF 302
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
G ++A V ++ PD +Y IL +G C++ + +A++++
Sbjct: 303 GKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIY--------------- 347
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
G M G PD ++DG K +A +L+ M++
Sbjct: 348 --------------------GEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQ 387
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDE 547
+ + YN I+GL + + L +L+K+ + +DA TF+ + G+++
Sbjct: 388 EGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEG 447
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
A L EM++ G S + VT ++L+ K G + ++LMK + + P+ + + +
Sbjct: 448 AVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVE 507
Query: 608 HFNKKHHPEE 617
K+ ++
Sbjct: 508 ASLKRPQSKD 517
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 172/415 (41%), Gaps = 33/415 (7%)
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
G+ + ++ +C+ + E ++ M +DG + +++D ++G + A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR-TYAT 325
L V+ M + G+ + P+ Y+S++ KK L LA +L +++A S T
Sbjct: 147 LGVLDYMEEL-GDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRV 203
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID-K 384
+I Y P V N +L L R E +V + K
Sbjct: 204 IIVSY---------------------LPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMK 242
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI------EDAFSLNILLNYICKS 438
D +SY I G G L AL L ++ + + D + N L++ +C
Sbjct: 243 RFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLF 302
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
+ G PD T +I G CK + A+R+Y M P+ +Y
Sbjct: 303 GKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVY 362
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKS 557
N ++G K A L +++ + + + T+N LI G +G+ + F L ++K
Sbjct: 363 NCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKK 422
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
G + +T++ + LC+ G E A +L++ M +G D +T ++L+ F+K+
Sbjct: 423 KGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQ 477
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 160/384 (41%), Gaps = 23/384 (5%)
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
++ +Y+ I C+ G L ++LG M + G L+D R G E +L +
Sbjct: 91 SATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVL 150
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI---DKHICPDQYSYAILTE-- 398
D M E G N VY+S+L L + ++ A +L ++ D H D I++
Sbjct: 151 DYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLP 210
Query: 399 ----------GLCRNGYLTEALKLHNQILKFDLIE-DAFSLNILLN-YIC-----KSXXX 441
GL R +E ++ ++ + D +S NI ++ + C +
Sbjct: 211 GTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSL 270
Query: 442 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 501
S+ PD+ T ++I C G + AL +++ + +P+ + Y
Sbjct: 271 FKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRIL 330
Query: 502 INGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
I G CK D A + E++ + D +N L+ G + ++ EA L +M G+
Sbjct: 331 IQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGV 390
Query: 561 SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA 620
A+ TYN LI+ L +NG E L + +G D IT++ + ++ E +
Sbjct: 391 RASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVK 450
Query: 621 LHDYMILKGVIPDQKTYDAIVTPF 644
L + M +G D T +++ F
Sbjct: 451 LVEEMETRGFSVDLVTISSLLIGF 474
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 177 VHAWNNFLSHLVEVNDID---RFWRLYKGMGSFGHVENVN--TFNLAIYALCKECRVVEA 231
V N FLS + D+ + + ++ GMG V ++ T+N + + K+ A
Sbjct: 594 VDMMNTFLSIYLSKGDLSLACKLFEIFNGMG----VTDLTSYTYNSMMSSFVKKGYFQTA 649
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSI 291
V+ +M ++ ++ ++N+II G K G DLA V+ ++ G + + V YN++
Sbjct: 650 RGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGG---YLDIVMYNTL 706
Query: 292 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
IN K L A ++ M G P V +Y T+I+ ++ G L+E+ + M++ G
Sbjct: 707 INALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGC 766
Query: 352 FPNIVVYNSILYWLYRHGDMEEA 374
PN V ++IL +L + +ME+A
Sbjct: 767 LPNHVT-DTILDYLGK--EMEKA 786
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 3/177 (1%)
Query: 261 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 320
G L LA K+ + N M + S +YNS+++ F KKG A VL M + +
Sbjct: 608 GDLSLACKLFEIFNGMGVTDL--TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADI 665
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
TY +I G + G + + + D + ++G + +IV+YN+++ L + ++EA+++
Sbjct: 666 ATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDH 725
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
M I PD SY + E + G L EA K +L + + + + +L+Y+ K
Sbjct: 726 MKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELR--KRKLLDATTFNTLISGYSNSGQIDEAFG 550
P N + GL + K + ++L+ KR D ++N I G+ G +D A
Sbjct: 210 PGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 551 LTTEMKSLG------LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
L EMK + TYN+LI++LC G ++A + + + G PD TY
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
LI K + ++ + ++ M G +PD Y+ ++ L A
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKA 372
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 192/438 (43%), Gaps = 33/438 (7%)
Query: 172 GCLV---SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRV 228
G LV + WN +S ++E W Y+ +F ++ F + I A K
Sbjct: 108 GTLVRFKQLKKWN-LVSEILE-------WLRYQNWWNFSEID----FLMLITAYGKLGNF 155
Query: 229 VEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY 288
A V+ + K G+ PNV+S+ +++ + G + A + ++M + P++++Y
Sbjct: 156 NGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ---SSGPEPSAITY 212
Query: 289 NSIINGFCKKGGLLLAEEV---LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
I+ F + AEEV L D K+ +P + Y +I Y + G+ E++ ++
Sbjct: 213 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 272
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
MV +G+ + V YNS++ + +E SK+ M I PD SYA+L + R
Sbjct: 273 MVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR 329
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
EAL + ++L + + NILL+ S SM + PD+++ T
Sbjct: 330 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTT 389
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
++ + E A + + IK+D +PN+ Y + I G K + + +++R
Sbjct: 390 MLSAYVNASDMEGAEKFFK-RIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLS 448
Query: 525 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ + T T++ A G EM+S G+ ++ N L++L EEA
Sbjct: 449 GIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 508
Query: 584 KELMKMMIMQGIRPDCIT 601
KEL GIR + T
Sbjct: 509 KELT------GIRNETAT 520
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 154/380 (40%), Gaps = 50/380 (13%)
Query: 267 LKVMKKMNLMTGNSVWP--------NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K +KK NL++ W + + + +I + K G AE VL + K G P
Sbjct: 113 FKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTP 172
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+V +Y L++ Y R G + + M G P+ + Y IL +EA +V
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 232
Query: 379 SDMIDKH---ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
++D+ + PDQ Y ++ + G +A K+ + ++ + + + N L+++
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF- 291
Query: 436 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 495
M + PDV + A +I + E+AL ++ M+ +P
Sbjct: 292 --ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349
Query: 496 TIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTE 554
YN ++ + AK + +R+ ++ D ++ T++S Y N+ +
Sbjct: 350 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM--------- 400
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
E A++ K + + G P+ +TY TLI + K +
Sbjct: 401 --------------------------EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 434
Query: 615 PEEVIALHDYMILKGVIPDQ 634
E+++ +++ M L G+ +Q
Sbjct: 435 VEKMMEVYEKMRLSGIKANQ 454
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN----SFINGLCKMAS 510
G P+V + +++ + G A ++ M +P+ Y +F+ G +
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 511 TDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 570
+V + L+DE + D ++ +I Y +G ++A + + M G+ + VTYN+L
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 288
Query: 571 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 630
++ +E ++ M I+PD ++Y LI + + EE +++ + M+ GV
Sbjct: 289 MSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 631 IPDQKTYDAIVTPFLLA 647
P K Y+ ++ F ++
Sbjct: 346 RPTHKAYNILLDAFAIS 362
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 167/380 (43%), Gaps = 40/380 (10%)
Query: 183 FLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDG 242
FL+ L E+ D + L+ G + +++ IY L K R +A+ I R+++
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKS-RNFDAVDQILRLVR-- 108
Query: 243 TFPNVVS----FNMIIDGACKTGSLDLALKVMKKM----------------NLMTGNS-- 280
+ NV F +I K GS+D A+ V K+ N++ N
Sbjct: 109 -YRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGEL 167
Query: 281 --------------VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
+ PNSVS+N +I GF K A +V +M++ +PSV TY +L
Sbjct: 168 EKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSL 227
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
I R + ++ L ++M+++ + PN V + ++ L G+ EA K++ DM +
Sbjct: 228 IGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGC 287
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 446
P +Y IL L + G + EA L ++ K + D NIL+N++C
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYR 347
Query: 447 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 506
M +G P+ T +IDG C++ + + L + N M+ P + + GL
Sbjct: 348 VLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI 407
Query: 507 KMASTDVAKNLVDELRKRKL 526
K + D A +++ + K+ L
Sbjct: 408 KGGNLDHACFVLEVMGKKNL 427
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 149/309 (48%), Gaps = 1/309 (0%)
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
EE+L L + E G + Y+S++Y L + + + ++L + +++ + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 456
+ + G + +A+ + ++I FD + SLN L+N + + L
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 516
P+ + +I G + E A ++++ M++M+ QP++ YNS I LC+ AK+
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 517 LVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
L++++ K+++ +A TF L+ G G+ +EA L +M+ G V Y L++ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 635
K G +EAK L+ M + I+PD + Y L+ H + E + M +KG P+
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 636 TYDAIVTPF 644
TY ++ F
Sbjct: 363 TYRMMIDGF 371
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 131/291 (45%), Gaps = 1/291 (0%)
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
SY+S+I K +++L + + LI Y + GS+++++ + ++
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI 142
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
I N+++ L +G++E+A D + P+ S+ IL +G
Sbjct: 143 TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDW 202
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
A K+ +++L+ ++ + N L+ ++C++ MI + + P+ T +
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
+ G C G +A +L M +P L Y ++ L K D AK L+ E++KR++
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Query: 527 L-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
D +N L++ ++ EA+ + TEM+ G N TY +I+ C+
Sbjct: 323 KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCR 373
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 171/370 (46%), Gaps = 8/370 (2%)
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
+V K LM + V P+ + I+ G G + + + ++K G +R +++
Sbjct: 164 EVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSIL 223
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
YA+ G L+ + + M ER +++ +NS+L ++G EEA +++ +M + I
Sbjct: 224 AVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
P ++ IL G + G A+ L ++ F + D F+ +++ + +
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
M G+ P+ T + + L + +++ +KM ++ + NS ++ K
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 508 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
+ A+ + D ++ + D T+N++I+GY +G +A+ L T M+ L N +T+
Sbjct: 400 CGKLEDARKVFDSVKNK---DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW 456
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQG-IRPDCITYTTLITHFNKKHHPEEVIALHDYMI 626
NT+I+ KNG + EA +L + M G ++ + T+ +I + + +E + L M
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 627 LKGVIPDQKT 636
+P+ T
Sbjct: 517 FSRFMPNSVT 526
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 203/499 (40%), Gaps = 79/499 (15%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDG-------------- 256
N+ T++ I A +E R E + M+KDG P+ F I+ G
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 257 ---------AC------------KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
+C K G LD A K ++M + +++NS++ +
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER-------DVIAWNSVLLAY 257
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
C+ G A E++ +M K G P + T+ LI GY + G + ++ L +M G+ ++
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV 317
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
+ +++ L +G +A + M + P+ + + + ++H+
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+K I+D N L++ K S+ + DVYT ++I G C+ G
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGY 433
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK--RKLLDATTFN 533
KA L+ M + +PN+ +N+ I+G K A +L + K + + T+N
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI----NLLCK------NGC---- 579
+I+GY +G+ DEA L +M+ N VT +L+ NLL +GC
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR 553
Query: 580 -------------DEEAK----ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
D AK E + + + D IT+ +LI + +AL
Sbjct: 554 NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALF 613
Query: 623 DYMILKGVIPDQKTYDAIV 641
+ M +G+ P++ T +I+
Sbjct: 614 NQMKTQGITPNRGTLSSII 632
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/534 (21%), Positives = 226/534 (42%), Gaps = 52/534 (9%)
Query: 79 DFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESY 138
+ + W M+ +S + RW E L R L+ K+G+ P + L
Sbjct: 145 NLFTWSAMIGAYSREN-----------RW-REVAKLFR-LMMKDGVLPDDFL-------- 183
Query: 139 QHCPAVFDALVRACTQVGATEGA---YDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDR 195
F +++ C G E + V+ +L CL N+ L+ + ++D
Sbjct: 184 ------FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCL---RVSNSILAVYAKCGELDF 234
Query: 196 FWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIID 255
+ ++ M +V +N + A C+ + EA+ ++ M K+G P +V++N++I
Sbjct: 235 ATKFFRRM----RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 256 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 315
G + G D A+ +M+KM + + ++ ++I+G G A ++ M AG
Sbjct: 291 GYNQLGKCDAAMDLMQKMETF---GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 316 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 375
P+ T + + + + + + V+ G +++V NS++ + G +E+A
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 376 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
KV + +K D Y++ + G C+ GY +A +L ++ +L + + N +++
Sbjct: 408 KVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Query: 436 CKSXXXXXXXXXXGSMITRG-LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
K+ M G + + T +I G + G ++AL L+ M PN
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA--TTFNTLISGYSNSGQIDEAFGLT 552
S + + + + + + +R LDA N L Y+ SG I+ + +
Sbjct: 524 SVTILSLLPACANLLGAKMVREIHGCVLRRN-LDAIHAVKNALTDTYAKSGDIEYSRTIF 582
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
M++ + +T+N+LI +G A L M QGI P+ T +++I
Sbjct: 583 LGMETKDI----ITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 148/340 (43%), Gaps = 15/340 (4%)
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
+K NL PN + + + C+ G LL AE+ L + + G + TY L++
Sbjct: 33 RKKNLSFTKKKEPNIIP-DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESC 91
Query: 331 ARWGSLEESLRLCDEMVERGLF--PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 388
GS+ L GLF P++ V +L + G + +A KV M ++++
Sbjct: 92 IDSGSIHLGRIL---HARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL-- 146
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 448
++++ + R E KL ++K ++ D F +L
Sbjct: 147 --FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 508
+I G+ + +++ K G + A + + M + D + +NS + C+
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD----VIAWNSVLLAYCQN 260
Query: 509 ASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
+ A LV E+ K + T+N LI GY+ G+ D A L +M++ G++A+ T+
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
+I+ L NG +A ++ + M + G+ P+ +T + ++
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS 360
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 177/415 (42%), Gaps = 21/415 (5%)
Query: 107 WFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVIC 166
W + L+ +N +E + EL++ + E ++ L+ Q+G + A D++
Sbjct: 250 WNSVLLAYCQNGKHEEAV---ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKEC 226
++ T G V W +S L+ + +++ M G V N T A+ A C
Sbjct: 307 KMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA-CSCL 365
Query: 227 RVVEAITVIYRM-LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNS 285
+V+ + ++ + +K G +V+ N ++D K G L+ A KV +SV
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF--------DSVKNKD 417
Query: 286 V-SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD 344
V ++NS+I G+C+ G A E+ M A P++ T+ T+I GY + G E++ L
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Query: 345 EMVERG-LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
M + G + N +N I+ ++G +EA ++ M P+ + L C N
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA-CAN 536
Query: 404 GYLTEALK-LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 462
+ ++ +H +L+ +L N L + KS M T+ D+ T
Sbjct: 537 LLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DIIT 592
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
++I G G+ AL L+N M PN +S I M + D K +
Sbjct: 593 WNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV 647
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 40/302 (13%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
V ++LV ++ G E A V ++ + V+ WN+ ++ + + + L+ M
Sbjct: 389 VGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRM 444
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFP-NVVSFNMIIDGACKTGS 262
N+ T+N I K EA+ + RM KDG N ++N+II G + G
Sbjct: 445 QDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGK 504
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG-------DMVKA- 314
D AL++ +KM + PNSV+ S++ G + E+ G D + A
Sbjct: 505 KDEALELFRKMQF---SRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAV 561
Query: 315 ----------------------GFE-PSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
G E + T+ +LI GY GS +L L ++M +G+
Sbjct: 562 KNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGI 621
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMI-DKHICPDQYSYAILTEGLCRNGYLTEAL 410
PN +SI+ G+++E KV + D HI P + + R L EAL
Sbjct: 622 TPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEAL 681
Query: 411 KL 412
+
Sbjct: 682 QF 683
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 15/296 (5%)
Query: 353 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 412
PNI+ Y L R+G + EA K L + + + +Y L E +G + L
Sbjct: 45 PNIIPDEQFDY-LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRIL 103
Query: 413 HNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 472
H + F D F LL+ K SM R L +T + +I +
Sbjct: 104 HARFGLFTE-PDVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSR 158
Query: 473 LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK---NLVDELRKRKLLDA 529
+ +L+ M+K P+ ++ + G + K ++V +L L
Sbjct: 159 ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRV 218
Query: 530 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 589
+ N++++ Y+ G++D A M+ + + +N+++ C+NG EEA EL+K
Sbjct: 219 S--NSILAVYAKCGELDFATKFFRRMRERDV----IAWNSVLLAYCQNGKHEEAVELVKE 272
Query: 590 MIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
M +GI P +T+ LI +N+ + + L M G+ D T+ A+++ +
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLI 328
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 190/435 (43%), Gaps = 8/435 (1%)
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
L+ G + + N L + + + F+ K F H + +T+ + L + +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKH--DGHTYTTMVGNLGRAKQ 379
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
++ M++DG PN V++N +I + L+ A+ V N M P+ V+
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF---NQMQEAGCKPDRVT 436
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
Y ++I+ K G L +A ++ M G P TY+ +I+ + G L + +L EMV
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
++G PN+V YN ++ + + + A K+ DM + PD+ +Y+I+ E L GYL
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
EA + ++ + + I D +L++ K+ +M+ GL P+V T +++
Sbjct: 557 EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
++ +A L M+ + +P+L Y ++ C + + +L
Sbjct: 617 STFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKLDMGFCGQLMASTGH 675
Query: 528 DATTFNTLISGYSNSGQ--IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
A F + G+ + A M S + R + +++ L K+G EEA
Sbjct: 676 PAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGS 735
Query: 586 LMKMMIMQGIRPDCI 600
+ ++ + + PD +
Sbjct: 736 VWEVAAQKNVFPDAL 750
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 34/330 (10%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ GF+ TY T++ R +L DEMV G PN V YN +++ R +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
EA V + M + PD+ +Y L + + G+L A+ ++ ++ L D F+ ++++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
N + K+ M+ +G P++ T ++D + K N + AL+LY M +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLT 552
P D T++ ++ + G ++EA +
Sbjct: 537 P----------------------------------DKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
TEM+ + Y L++L K G E+A + + M+ G+RP+ T +L++ F +
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 613 HHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ E L M+ G+ P +TY +++
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 118/289 (40%), Gaps = 34/289 (11%)
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
Y +++ L R +K+L +M+ P+ +Y L R YL EA+ + NQ+
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 417 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 476
+ D + L++ K+ M GL PD +T + +I+ K G+
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 536
A +L+ M+ PNL YN ++ L A N
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMD-----------------------LHAKARN--- 519
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
Y N A L +M++ G ++VTY+ ++ +L G EEA+ + M +
Sbjct: 520 --YQN------ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
PD Y L+ + K + E+ + M+ G+ P+ T +++++ FL
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 104/232 (44%), Gaps = 18/232 (7%)
Query: 96 CTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQV 155
CTL+ + + + A+ + + + A G++P + ++ +
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAG-GLSPDTF--------------TYSVIINCLGKA 482
Query: 156 GATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
G A+ + CE+ +GC ++ +N + + + +LY+ M + G + T+
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL 275
++ + L + EA V M + P+ + +++D K G+++ A + + M L
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM-L 601
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
G + PN + NS+++ F + + A E+L +M+ G PS++TY L+
Sbjct: 602 HAG--LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 190/435 (43%), Gaps = 8/435 (1%)
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
L+ G + + N L + + + F+ K F H + +T+ + L + +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKH--DGHTYTTMVGNLGRAKQ 379
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
++ M++DG PN V++N +I + L+ A+ V N M P+ V+
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF---NQMQEAGCKPDRVT 436
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
Y ++I+ K G L +A ++ M G P TY+ +I+ + G L + +L EMV
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
++G PN+V YN ++ + + + A K+ DM + PD+ +Y+I+ E L GYL
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
EA + ++ + + I D +L++ K+ +M+ GL P+V T +++
Sbjct: 557 EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
++ +A L M+ + +P+L Y ++ C + + +L
Sbjct: 617 STFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKLDMGFCGQLMASTGH 675
Query: 528 DATTFNTLISGYSNSGQ--IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
A F + G+ + A M S + R + +++ L K+G EEA
Sbjct: 676 PAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGS 735
Query: 586 LMKMMIMQGIRPDCI 600
+ ++ + + PD +
Sbjct: 736 VWEVAAQKNVFPDAL 750
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 34/330 (10%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ GF+ TY T++ R +L DEMV G PN V YN +++ R +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
EA V + M + PD+ +Y L + + G+L A+ ++ ++ L D F+ ++++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
N + K+ M+ +G P++ T ++D + K N + AL+LY M +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLT 552
P D T++ ++ + G ++EA +
Sbjct: 537 P----------------------------------DKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
TEM+ + Y L++L K G E+A + + M+ G+RP+ T +L++ F +
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 613 HHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ E L M+ G+ P +TY +++
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 118/289 (40%), Gaps = 34/289 (11%)
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
Y +++ L R +K+L +M+ P+ +Y L R YL EA+ + NQ+
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 417 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 476
+ D + L++ K+ M GL PD +T + +I+ K G+
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 536
A +L+ M+ PNL YN ++ L A N
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMD-----------------------LHAKARN--- 519
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
Y N A L +M++ G ++VTY+ ++ +L G EEA+ + M +
Sbjct: 520 --YQN------ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
PD Y L+ + K + E+ + M+ G+ P+ T +++++ FL
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 104/232 (44%), Gaps = 18/232 (7%)
Query: 96 CTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQV 155
CTL+ + + + A+ + + + A G++P + ++ +
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAG-GLSPDTF--------------TYSVIINCLGKA 482
Query: 156 GATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
G A+ + CE+ +GC ++ +N + + + +LY+ M + G + T+
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL 275
++ + L + EA V M + P+ + +++D K G+++ A + + M L
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM-L 601
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
G + PN + NS+++ F + + A E+L +M+ G PS++TY L+
Sbjct: 602 HAG--LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 190/435 (43%), Gaps = 8/435 (1%)
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
L+ G + + N L + + + F+ K F H + +T+ + L + +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKH--DGHTYTTMVGNLGRAKQ 379
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
++ M++DG PN V++N +I + L+ A+ V N M P+ V+
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF---NQMQEAGCKPDRVT 436
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
Y ++I+ K G L +A ++ M G P TY+ +I+ + G L + +L EMV
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
++G PN+V YN ++ + + + A K+ DM + PD+ +Y+I+ E L GYL
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
EA + ++ + + I D +L++ K+ +M+ GL P+V T +++
Sbjct: 557 EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
++ +A L M+ + +P+L Y ++ C + + +L
Sbjct: 617 STFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKLDMGFCGQLMASTGH 675
Query: 528 DATTFNTLISGYSNSGQ--IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
A F + G+ + A M S + R + +++ L K+G EEA
Sbjct: 676 PAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGS 735
Query: 586 LMKMMIMQGIRPDCI 600
+ ++ + + PD +
Sbjct: 736 VWEVAAQKNVFPDAL 750
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 34/330 (10%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ GF+ TY T++ R +L DEMV G PN V YN +++ R +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
EA V + M + PD+ +Y L + + G+L A+ ++ ++ L D F+ ++++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
N + K+ M+ +G P++ T ++D + K N + AL+LY M +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLT 552
P D T++ ++ + G ++EA +
Sbjct: 537 P----------------------------------DKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
TEM+ + Y L++L K G E+A + + M+ G+RP+ T +L++ F +
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 613 HHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ E L M+ G+ P +TY +++
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 118/289 (40%), Gaps = 34/289 (11%)
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
Y +++ L R +K+L +M+ P+ +Y L R YL EA+ + NQ+
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 417 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 476
+ D + L++ K+ M GL PD +T + +I+ K G+
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 536
A +L+ M+ PNL YN ++ L A N
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMD-----------------------LHAKARN--- 519
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
Y N A L +M++ G ++VTY+ ++ +L G EEA+ + M +
Sbjct: 520 --YQN------ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
PD Y L+ + K + E+ + M+ G+ P+ T +++++ FL
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 104/232 (44%), Gaps = 18/232 (7%)
Query: 96 CTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQV 155
CTL+ + + + A+ + + + A G++P + ++ +
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAG-GLSPDTF--------------TYSVIINCLGKA 482
Query: 156 GATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
G A+ + CE+ +GC ++ +N + + + +LY+ M + G + T+
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL 275
++ + L + EA V M + P+ + +++D K G+++ A + + M L
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM-L 601
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
G + PN + NS+++ F + + A E+L +M+ G PS++TY L+
Sbjct: 602 HAG--LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 124/608 (20%), Positives = 240/608 (39%), Gaps = 67/608 (11%)
Query: 57 KLTTFMVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSL 114
++T +V V+ + N +A F++W G + H ++ +N A
Sbjct: 122 RVTPSIVAEVL-KLGNDAAVAAKFFHWAGKQKGYKHDF-AAYNAFAYCLNRNGHFRAADQ 179
Query: 115 MRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCL 174
+ L+ +G P E F+ L+R Y V +++ G
Sbjct: 180 LPELMDSQGRPPSE--------------KQFEILIRMHADNRRGLRVYYVYEKMKKFGFK 225
Query: 175 VSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITV 234
V +N + LV+ D +Y+ G VE TF + + LCK R+ E + +
Sbjct: 226 PRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEI 285
Query: 235 IYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIING 294
+ RM ++ P+V ++ +I G+LD +L+V +M + + P+ ++Y +++ G
Sbjct: 286 LQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRR---DEIKPDVMAYGTLVVG 342
Query: 295 FCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN 354
CK G + E+ +M Y LI+G+ G + + L +++V+ G +
Sbjct: 343 LCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIAD 402
Query: 355 IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD-------QYSYAILTE--------- 398
I +YN+++ L +++A K+ I++ + PD +Y ++
Sbjct: 403 IGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLE 462
Query: 399 -----GLCRNGYLTEALKLHNQILKFDLIEDAFSL-----------------NILLNYIC 436
G + YLT+ KL L D ++A +L NIL+ +
Sbjct: 463 RIGELGYPVSDYLTQFFKL----LCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALY 518
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
K M G PD + + I + G+ + A + +I+M P++
Sbjct: 519 KMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIA 578
Query: 497 IYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLIS--GYSNSGQIDEAFGLTTE 554
Y S GLC++ D LV E F ++ ++ + E
Sbjct: 579 AYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDE 638
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI--RPDCITYTTLITHFNKK 612
M G+ N V Y +I+ + K+G + A+E+ + + + D + Y ++ KK
Sbjct: 639 MNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKK 698
Query: 613 HHPEEVIA 620
+ V++
Sbjct: 699 KTADLVLS 706
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 176/439 (40%), Gaps = 46/439 (10%)
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M S G + F + I R + V +M K G P V +N I+D K G
Sbjct: 184 MDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGY 243
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
DLAL V + + + S ++ ++ G CK G + E+L M + +P V
Sbjct: 244 FDLALAVYEDFK---EDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFA 300
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
Y +I G+L+ SLR+ DEM + P+++ Y +++ L + G +E ++ +M
Sbjct: 301 YTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMK 360
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
K I D+ Y +L EG +G + A +L ED
Sbjct: 361 GKQILIDREIYRVLIEGFVADGKVRSAC---------NLWED------------------ 393
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
++ G D+ VI G C + +KA +L+ I+ + +P+ + +
Sbjct: 394 --------LVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIM 445
Query: 503 NGLCKMASTDVAKNLVDELRK--RKLLDATT--FNTLISGYSNSGQIDEAFGLTTEMKSL 558
M N+++ + + + D T F L + + + F + +K+
Sbjct: 446 VAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYI---LKTK 502
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
G + V YN L+ L K G +++ L M G PD +Y+ I F +K +
Sbjct: 503 GHGSVSV-YNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAA 561
Query: 619 IALHDYMILKGVIPDQKTY 637
+ H+ +I +P Y
Sbjct: 562 CSFHEKIIEMSCVPSIAAY 580
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/510 (19%), Positives = 200/510 (39%), Gaps = 70/510 (13%)
Query: 98 LLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGA 157
++ LV + +F AL++ + KE + L++ES F LV+ + G
Sbjct: 234 IMDALVKNGYFDLALAVYEDF--KE--------DGLVEES-----TTFMILVKGLCKAGR 278
Query: 158 TEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
E +++ +R C V A+ + LV ++D R++ M +V +
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
+ LCK+ RV + M + + ++I+G G + A + + +L+
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWE--DLVD 396
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
+ + YN++I G C + A ++ ++ EP T + ++ Y L
Sbjct: 397 SGYIADIGI-YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLS 455
Query: 338 ESLRLCDEMVERGLFP-----------------------------------NIVVYNSIL 362
+ + + + E G +P ++ VYN ++
Sbjct: 456 DFSNVLERIGELG-YPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILM 514
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
LY+ GD++++ + +M PD SY+I G + A H +I++ +
Sbjct: 515 EALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCV 574
Query: 423 EDAFSLNILLNYICK----SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
+ L +C+ G++ + P + A + CK N EK
Sbjct: 575 PSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVES---GPMEFKYALTVCHVCKGSNAEK 631
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL---DATTFNTL 535
+++ + M + N IY + I+G+ K + VA+ + EL+KRK++ D + +
Sbjct: 632 VMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEM 691
Query: 536 ISGYSNSGQID------EAFGLTTEMKSLG 559
+ + D + FGL +++++ G
Sbjct: 692 LIEQTKKKTADLVLSGIKFFGLESKLRAKG 721
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 121/300 (40%), Gaps = 1/300 (0%)
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
++G + YN+ Y L R+G A ++ M + P + + IL N
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
++ ++ KF F N +++ + K+ GL + T ++
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
G CK G E+ L + M + +P++ Y + I L + D + + DE+R+ ++
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 528 -DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
D + TL+ G G+++ + L EMK + +R Y LI +G A L
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390
Query: 587 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
+ ++ G D Y +I + ++ L I + + PD +T I+ +++
Sbjct: 391 WEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVV 450
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 142/319 (44%), Gaps = 8/319 (2%)
Query: 214 TFNLAIYALCKECRVVEAI-TVIYRMLKDGTFPNVVSFNMIIDG-ACKTGSLDLALKVMK 271
T+ + +YA E ++ E + + Y+ML+ P N I+D G L A ++ K
Sbjct: 123 TYLIKVYA---EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
L + V PN+ SYN ++ FC L +A ++ G M++ P V +Y LI G+
Sbjct: 180 SSRL---HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFC 236
Query: 332 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 391
R G + ++ L D+M+ +G P+ + Y ++L L R + EA K+L M K PD
Sbjct: 237 RKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLV 296
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
Y + G CR +A K+ + +L ++ S L+ +C M
Sbjct: 297 HYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Query: 452 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 511
I++G P ++ G C G E+A + ++K E + + I +C +
Sbjct: 357 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDES 416
Query: 512 DVAKNLVDELRKRKLLDAT 530
+ K +++ K ++ T
Sbjct: 417 EKIKLFLEDAVKEEITGDT 435
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 171/400 (42%), Gaps = 23/400 (5%)
Query: 22 KRFSNPTAAAEDIIFRAICVHLKHRRWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFY 81
+ ++P + + +F + H + R+ SP + V ++++ + P LA + +
Sbjct: 14 RHLTSPLSTSSRFLFYSSSEH-EARKPIVSNPKSPIGSPTRVQKLIAS-QSDPLLAKEIF 71
Query: 82 NWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQ 139
++ F HS S L+ L R+F +L+ +++AK Y
Sbjct: 72 DYASQQPNFRHSRSSHLILILKLGRGRYF----NLIDDVLAKH-----------RSSGYP 116
Query: 140 HCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVND-IDRFWR 198
+F L++ + E ++ N L LV + + +
Sbjct: 117 LTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE 176
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L+K G + N ++NL + A C + A + +ML+ P+V S+ ++I G C
Sbjct: 177 LFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFC 236
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
+ G ++ A++++ M P+ +SY +++N C+K L A ++L M G P
Sbjct: 237 RKGQVNGAMELLDD---MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+ Y T+I G+ R ++ ++ D+M+ G PN V Y +++ L G +E K L
Sbjct: 294 DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYL 353
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
+MI K P L +G C G + EA + ++K
Sbjct: 354 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 393
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 2/294 (0%)
Query: 303 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 362
L ++VL +G+ + + LI YA E+ L +M+E P N IL
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRIL 161
Query: 363 YWLYRH-GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
L H G +++A ++ + P+ SY +L + C N L+ A +L ++L+ D+
Sbjct: 162 DVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV 221
Query: 422 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 481
+ D S IL+ C+ M+ +G PD + T+++ C+ +A +
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYK 281
Query: 482 LYNGMIKMDEQPNLTIYNSFINGLCKM-ASTDVAKNLVDELRKRKLLDATTFNTLISGYS 540
L M P+L YN+ I G C+ + D K L D L ++ ++ TLI G
Sbjct: 282 LLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC 341
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 594
+ G DE EM S G S + N L+ C G EEA +++++++ G
Sbjct: 342 DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTF 532
G +KA L+ PN YN + C +A L ++ +R ++ D ++
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
LI G+ GQ++ A L +M + G +R++Y TL+N LC+ EA +L+ M +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 593 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+G PD + Y T+I F ++ + + D M+ G P+ +Y ++
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
+ L++ + G GA +++ ++ +G + ++ L+ L + ++L M
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G ++ +N I C+E R ++A V+ ML +G PN VS+ +I G C G D
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 315
K +++ M P+ N ++ GFC G + A +V+ ++K G
Sbjct: 348 EGKKYLEE---MISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%)
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
+ ++N L+ + + + A+ L +M + + +Y LI C+ G A EL+
Sbjct: 189 NTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
M+ +G PD ++YTTL+ +K E L M LKG PD Y+ ++ F
Sbjct: 249 DDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGF 305
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 206/485 (42%), Gaps = 56/485 (11%)
Query: 172 GCLVSVHA-WNNFLSHLVEVNDIDRF--------WRLYKGMGSFGHVENVNTFNLAIYAL 222
G L S HA W++ ++ V++ ++ W L K SF +V FNL I A
Sbjct: 132 GALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKS--SFQ--PDVICFNLLIDAY 187
Query: 223 CKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVW 282
++ + EA ++ ++L+ P ++ ++I C G ++ A V+ +M + V
Sbjct: 188 GQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ---NHHVS 244
Query: 283 PNSVS---YNSIINGFCK-KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
P ++ YN+ I G K KG A +V M + +P+ TY +I+ Y +
Sbjct: 245 PKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYM 304
Query: 339 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
S +L EM PNI Y +++ R G E+A ++ + + + PD Y Y L E
Sbjct: 305 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 364
Query: 399 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
R GY A ++ FSL M G P
Sbjct: 365 SYSRAGYPYGAAEI-------------FSL----------------------MQHMGCEP 389
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
D + ++D + G A ++ M ++ P + + ++ K + +V
Sbjct: 390 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 449
Query: 519 DELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 577
E+ + + D N++++ Y GQ + + EM++ +A+ TYN LIN+ K
Sbjct: 450 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 509
Query: 578 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
G E +EL + + RPD +T+T+ I +++K + + + + MI G PD T
Sbjct: 510 GFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTA 569
Query: 638 DAIVT 642
+++
Sbjct: 570 KVLLS 574
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 184/433 (42%), Gaps = 45/433 (10%)
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVS---FNMIIDGACK-TGSL 263
+V +T+ L I A C + A V+ M P + +N I+G K G+
Sbjct: 208 YVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNT 267
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
+ A+ V ++M + P + +YN +IN + K ++ ++ +M +P++ TY
Sbjct: 268 EEAIDVFQRMKR---DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
L++ +AR G E++ + +++ E GL P++ VYN+++ R G A+++ S M
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
PD+ SY I+ + R G ++A + ++ + + S +LL+ K+
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 444
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
M G+ PD + ++++ +LG KM++ I N
Sbjct: 445 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ----------FTKMEK-----ILAEMEN 489
Query: 504 GLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
G C D +T+N LI+ Y +G ++ L E+K +
Sbjct: 490 GPCTA-------------------DISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 530
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA--- 620
VT+ + I + + E+ + MI G PD T L++ + + E+V +
Sbjct: 531 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR 590
Query: 621 -LHDYMILKGVIP 632
+H + + ++P
Sbjct: 591 TMHKGVTVSSLVP 603
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 132/304 (43%), Gaps = 3/304 (0%)
Query: 156 GATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
G TE A DV ++ C + +N ++ + + W+LY M S N+ T+
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL 275
+ A +E +A + ++ +DG P+V +N +++ + G A ++ +L
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI---FSL 381
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
M P+ SYN +++ + + G AE V +M + G P+++++ L+ Y++
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+ + + EM E G+ P+ V NS+L R G + K+L++M + D +Y I
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 501
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L + G+L +L ++ + + D + + + MI G
Sbjct: 502 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Query: 456 LPPD 459
PD
Sbjct: 562 CAPD 565
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN---LTIYNSFINGLCKM-ASTDV 513
P T A +I C G E+A + M P +T+YN++I GL K +T+
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 269
Query: 514 AKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
A ++ +++ + T T+N +I+ Y + + ++ L EM+S N TY L+N
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 573 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
+ G E+A+E+ + + G+ PD Y L+ +++ +P + M G P
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
Query: 633 DQKTYDAIVTPF 644
D+ +Y+ +V +
Sbjct: 390 DRASYNIMVDAY 401
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/315 (17%), Positives = 132/315 (41%), Gaps = 36/315 (11%)
Query: 332 RWGSLEESLRLCDEMVERGLF-PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
+W S+ + +C+ ++ + F P+++ +N ++ + +EA + +++ P +
Sbjct: 156 KWDSI---ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 212
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
+YA+L + C G + A + ++ + + + YI G
Sbjct: 213 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYI------------EGL 260
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M +G NTE+A+ ++ M + +P YN IN K +
Sbjct: 261 MKRKG-------------------NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASK 301
Query: 511 TDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
+ ++ L E+R + + T+ L++ ++ G ++A + +++ GL + YN
Sbjct: 302 SYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNA 361
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
L+ + G A E+ +M G PD +Y ++ + + + A+ + M G
Sbjct: 362 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 421
Query: 630 VIPDQKTYDAIVTPF 644
+ P K++ +++ +
Sbjct: 422 IAPTMKSHMLLLSAY 436
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 206/485 (42%), Gaps = 56/485 (11%)
Query: 172 GCLVSVHA-WNNFLSHLVEVNDIDRF--------WRLYKGMGSFGHVENVNTFNLAIYAL 222
G L S HA W++ ++ V++ ++ W L K SF +V FNL I A
Sbjct: 110 GALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKS--SFQ--PDVICFNLLIDAY 165
Query: 223 CKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVW 282
++ + EA ++ ++L+ P ++ ++I C G ++ A V+ +M + V
Sbjct: 166 GQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ---NHHVS 222
Query: 283 PNSVS---YNSIINGFCK-KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
P ++ YN+ I G K KG A +V M + +P+ TY +I+ Y +
Sbjct: 223 PKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYM 282
Query: 339 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
S +L EM PNI Y +++ R G E+A ++ + + + PD Y Y L E
Sbjct: 283 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 342
Query: 399 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
R GY A ++ FSL M G P
Sbjct: 343 SYSRAGYPYGAAEI-------------FSL----------------------MQHMGCEP 367
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
D + ++D + G A ++ M ++ P + + ++ K + +V
Sbjct: 368 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 427
Query: 519 DELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 577
E+ + + D N++++ Y GQ + + EM++ +A+ TYN LIN+ K
Sbjct: 428 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 487
Query: 578 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
G E +EL + + RPD +T+T+ I +++K + + + + MI G PD T
Sbjct: 488 GFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTA 547
Query: 638 DAIVT 642
+++
Sbjct: 548 KVLLS 552
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 184/433 (42%), Gaps = 45/433 (10%)
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVS---FNMIIDGACK-TGSL 263
+V +T+ L I A C + A V+ M P + +N I+G K G+
Sbjct: 186 YVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNT 245
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
+ A+ V ++M + P + +YN +IN + K ++ ++ +M +P++ TY
Sbjct: 246 EEAIDVFQRMKR---DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
L++ +AR G E++ + +++ E GL P++ VYN+++ R G A+++ S M
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
PD+ SY I+ + R G ++A + ++ + + S +LL+ K+
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
M G+ PD + ++++ +LG KM++ I N
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ----------FTKMEK-----ILAEMEN 467
Query: 504 GLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
G C D +T+N LI+ Y +G ++ L E+K +
Sbjct: 468 GPCTA-------------------DISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 508
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA--- 620
VT+ + I + + E+ + MI G PD T L++ + + E+V +
Sbjct: 509 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR 568
Query: 621 -LHDYMILKGVIP 632
+H + + ++P
Sbjct: 569 TMHKGVTVSSLVP 581
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 132/304 (43%), Gaps = 3/304 (0%)
Query: 156 GATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
G TE A DV ++ C + +N ++ + + W+LY M S N+ T+
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL 275
+ A +E +A + ++ +DG P+V +N +++ + G A ++ +L
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI---FSL 359
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
M P+ SYN +++ + + G AE V +M + G P+++++ L+ Y++
Sbjct: 360 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+ + + EM E G+ P+ V NS+L R G + K+L++M + D +Y I
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 479
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
L + G+L +L ++ + + D + + + MI G
Sbjct: 480 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Query: 456 LPPD 459
PD
Sbjct: 540 CAPD 543
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN---LTIYNSFINGLCKM-ASTDV 513
P T A +I C G E+A + M P +T+YN++I GL K +T+
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 247
Query: 514 AKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
A ++ +++ + T T+N +I+ Y + + ++ L EM+S N TY L+N
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 573 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
+ G E+A+E+ + + G+ PD Y L+ +++ +P + M G P
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
Query: 633 DQKTYDAIVTPF 644
D+ +Y+ +V +
Sbjct: 368 DRASYNIMVDAY 379
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/315 (17%), Positives = 132/315 (41%), Gaps = 36/315 (11%)
Query: 332 RWGSLEESLRLCDEMVERGLF-PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
+W S+ + +C+ ++ + F P+++ +N ++ + +EA + +++ P +
Sbjct: 134 KWDSI---ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 190
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
+YA+L + C G + A + ++ + + + YI G
Sbjct: 191 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYI------------EGL 238
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M +G NTE+A+ ++ M + +P YN IN K +
Sbjct: 239 MKRKG-------------------NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASK 279
Query: 511 TDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
+ ++ L E+R + + T+ L++ ++ G ++A + +++ GL + YN
Sbjct: 280 SYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNA 339
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
L+ + G A E+ +M G PD +Y ++ + + + A+ + M G
Sbjct: 340 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 399
Query: 630 VIPDQKTYDAIVTPF 644
+ P K++ +++ +
Sbjct: 400 IAPTMKSHMLLLSAY 414
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 174/381 (45%), Gaps = 29/381 (7%)
Query: 49 SALEQLSPKLTTFMVNRVVS------EFHNSPH---LALDFYNWVGM--LFPHSLHSSCT 97
S L++L+ +++ +V V+ + N LA F+ W G F H+++S
Sbjct: 95 SVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHL 154
Query: 98 LLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGA 157
L+++ F E E A L++ ++ + + F+ L+ +C + G
Sbjct: 155 LMKI------FAEC---------GEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGL 199
Query: 158 TEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
+ A + +T H++N L+ L+ V +YK M G +V T+N+
Sbjct: 200 AKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNI 259
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
++ + ++ + M +DG P+ ++N+++ G + L + +N M
Sbjct: 260 LLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLH---ILGKGNKPLAALTTLNHMK 316
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
+ P+ + Y ++I+G + G L + L +MVKAG P V Y +I GY G L+
Sbjct: 317 EVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELD 376
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
++ + EM +G PN+ YNS++ L G+ EA +L +M + P+ Y+ L
Sbjct: 377 KAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 398 EGLCRNGYLTEALKLHNQILK 418
L + G L+EA K+ +++K
Sbjct: 437 SYLRKAGKLSEARKVIREMVK 457
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 154/389 (39%), Gaps = 74/389 (19%)
Query: 206 FGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDL 265
F H N + I+A C E + + + + M++DG +FN++I C G L
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRL--VDEMVQDGFPTTARTFNLLI---CSCGEAGL 199
Query: 266 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 325
A + + + + P SYN+I+N +LG V+ Y
Sbjct: 200 AKQAVVQFMKSKTFNYRPFKHSYNAILN------------SLLG----------VKQYKL 237
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
+ W + +M+E G P+++ YN +L+ YR G M+ ++ +M
Sbjct: 238 I-----EW--------VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDG 284
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
PD Y+Y IL L + AL N + + + L++ + ++
Sbjct: 285 FSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACK 344
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 505
M+ G PDV +I G G +KA ++ M + PN+ YNS I GL
Sbjct: 345 YFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGL 404
Query: 506 CKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 565
C +G+ EA L EM+S G + N V
Sbjct: 405 CM----------------------------------AGEFREACWLLKEMESRGCNPNFV 430
Query: 566 TYNTLINLLCKNGCDEEAKELMKMMIMQG 594
Y+TL++ L K G EA+++++ M+ +G
Sbjct: 431 VYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 143/329 (43%), Gaps = 9/329 (2%)
Query: 316 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 375
F +V +Y L+ +A G + RL DEMV+ G +N ++ G ++A
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 376 KVLSDMIDKHICPDQYSY-AILTEGLCRNGY-LTEALKLHNQILKFDLIEDAFSLNILLN 433
+ P ++SY AIL L Y L E + + Q+L+ D + NILL
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWV--YKQMLEDGFSPDVLTYNILLW 262
Query: 434 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 493
+ M G PD YT ++ K AL N M ++ P
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLT 552
++ Y + I+GL + + + K +DE+ K D + +I+GY SG++D+A +
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMF 382
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
EM G N TYN++I LC G EA L+K M +G P+ + Y+TL+++ K
Sbjct: 383 REMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKA 442
Query: 613 HHPEEVIALHDYMILKG----VIPDQKTY 637
E + M+ KG ++P Y
Sbjct: 443 GKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 138/316 (43%), Gaps = 9/316 (2%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
+V++++ + E + WRL M G TFNL I + C E + + V
Sbjct: 148 TVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICS-CGEAGLAKQAVV- 205
Query: 236 YRMLKDGTF---PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII 292
+ +K TF P S+N I++ L V K+M L G S P+ ++YN ++
Sbjct: 206 -QFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM-LEDGFS--PDVLTYNILL 261
Query: 293 NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 352
+ G + + + +M + GF P TY L+ + +L + M E G+
Sbjct: 262 WTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGID 321
Query: 353 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 412
P+++ Y +++ L R G++E L +M+ PD Y ++ G +G L +A ++
Sbjct: 322 PSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEM 381
Query: 413 HNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 472
++ + + F+ N ++ +C + M +RG P+ +T++ K
Sbjct: 382 FREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRK 441
Query: 473 LGNTEKALRLYNGMIK 488
G +A ++ M+K
Sbjct: 442 AGKLSEARKVIREMVK 457
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 7/298 (2%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
++ +G FG +N + NL + LCKE RV +A V+ + LK PN +FN+ I G C
Sbjct: 177 IFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWC 235
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K ++ AL +++M G+ P +SY +II +C++ + E+L +M G P
Sbjct: 236 KANRVEEALWTIQEMK---GHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+ TY T++ EE+LR+ M G P+ + YN +++ L R G +EEA +V
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 352
Query: 379 S-DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNILLNYIC 436
+M + + + +Y + C + +A++L ++ +L D + LL
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF 412
Query: 437 KSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 493
K M+T+ L D T +I C+ E A L+ MI D P
Sbjct: 413 KRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 132/279 (47%), Gaps = 6/279 (2%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
N +TFN+ I+ CK RV EA+ I M G P V+S+ II C+ +KV
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF---IKVY 279
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
+ ++ M N PNS++Y +I++ + A V M ++G +P Y LI
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 331 ARWGSLEESLRLCD-EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-P 388
AR G LEE+ R+ EM E G+ N YNS++ H + ++A ++L +M ++C P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQIL-KFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
D ++Y L + G + E KL +++ K L D + L+ +C++
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
MI++ + P T +++ K E A R+ + M
Sbjct: 460 FEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 15/299 (5%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
EA+ + R+ + G N S N+++D CK ++ A V+ L + + PN+ ++N
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL----LQLKSHITPNAHTFN 228
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
I+G+CK + A + +M GF P V +Y T+I Y + + + EM
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G PN + Y +I+ L + EEA +V + M PD Y L L R G L EA
Sbjct: 289 GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 410 LKLHNQILKFDLIEDAFSLNI-----LLNYICKSXXXXXXXXXXGSMITRGL-PPDVYTK 463
++ + ++ E S+N ++ C M + L PDV+T
Sbjct: 349 ----ERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 464 ATVIDGNCKLGNTEKALRLYNGMI-KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
++ K G+ + +L M+ K + + Y I LC+ + A L +E+
Sbjct: 405 QPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 120/265 (45%), Gaps = 6/265 (2%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
+ H +N F+ + N ++ + M G V ++ I C++ ++ ++
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
M +G+ PN +++ I+ + AL+V +M + P+S+ YN +I+
Sbjct: 283 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK---RSGCKPDSLFYNCLIHTL 339
Query: 296 CKKGGLLLAEEVLG-DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF-P 353
+ G L AE V +M + G + TY ++I Y ++++ L EM L P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDK-HICPDQYSYAILTEGLCRNGYLTEALKL 412
++ Y +L ++ GD+ E K+L +M+ K H+ D+ +Y L + LCR A L
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 413 HNQILKFDLIEDAFSLNILLNYICK 437
+++ D+ + +LL + K
Sbjct: 460 FEEMISQDITPRHRTCLLLLEEVKK 484
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 38/332 (11%)
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
++ T A ++ +A G EE++ + D + E GL N N +L L + +E+A VL
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
+ HI P+ +++ I G C+ + EAL ++ S ++ C+
Sbjct: 214 LQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
M G PP+ T T++ E+ALR+ M + +P+ Y
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL-TTEMKS 557
N I+ L + +G+++EA + EM
Sbjct: 333 NCLIHTLAR----------------------------------AGRLEEAERVFRVEMPE 358
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI-RPDCITYTTLITHFNKKHHPE 616
LG+S N TYN++I + C + +++A EL+K M + PD TY L+ K+
Sbjct: 359 LGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVV 418
Query: 617 EVIALHDYMILKGVIP-DQKTYDAIVTPFLLA 647
EV L M+ K + D+ TY ++ A
Sbjct: 419 EVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
Y+ ++ L K D K V+ +R KL+ T ++ ++ +G+ +EA G+ +
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
GL N + N L++ LCK E+A+ ++ + + I P+ T+ I + K + EE
Sbjct: 184 FGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 618 VIALHDYMILKGVIPDQKTYDAIV 641
+ M G P +Y I+
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTII 266
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 7/298 (2%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
++ +G FG +N + NL + LCKE RV +A V+ + LK PN +FN+ I G C
Sbjct: 177 IFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWC 235
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
K ++ AL +++M G+ P +SY +II +C++ + E+L +M G P
Sbjct: 236 KANRVEEALWTIQEMK---GHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+ TY T++ EE+LR+ M G P+ + YN +++ L R G +EEA +V
Sbjct: 293 NSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF 352
Query: 379 S-DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNILLNYIC 436
+M + + + +Y + C + +A++L ++ +L D + LL
Sbjct: 353 RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCF 412
Query: 437 KSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 493
K M+T+ L D T +I C+ E A L+ MI D P
Sbjct: 413 KRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 132/279 (47%), Gaps = 6/279 (2%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
N +TFN+ I+ CK RV EA+ I M G P V+S+ II C+ +KV
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF---IKVY 279
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
+ ++ M N PNS++Y +I++ + A V M ++G +P Y LI
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 331 ARWGSLEESLRLCD-EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-P 388
AR G LEE+ R+ EM E G+ N YNS++ H + ++A ++L +M ++C P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQIL-KFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
D ++Y L + G + E KL +++ K L D + L+ +C++
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
MI++ + P T +++ K E A R+ + M
Sbjct: 460 FEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 15/299 (5%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
EA+ + R+ + G N S N+++D CK ++ A V+ L + + PN+ ++N
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL----LQLKSHITPNAHTFN 228
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
I+G+CK + A + +M GF P V +Y T+I Y + + + EM
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G PN + Y +I+ L + EEA +V + M PD Y L L R G L EA
Sbjct: 289 GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
Query: 410 LKLHNQILKFDLIEDAFSLNI-----LLNYICKSXXXXXXXXXXGSMITRGL-PPDVYTK 463
++ + ++ E S+N ++ C M + L PDV+T
Sbjct: 349 ----ERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 464 ATVIDGNCKLGNTEKALRLYNGMI-KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
++ K G+ + +L M+ K + + Y I LC+ + A L +E+
Sbjct: 405 QPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 120/265 (45%), Gaps = 6/265 (2%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
+ H +N F+ + N ++ + M G V ++ I C++ ++ ++
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
M +G+ PN +++ I+ + AL+V +M + P+S+ YN +I+
Sbjct: 283 SEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK---RSGCKPDSLFYNCLIHTL 339
Query: 296 CKKGGLLLAEEVLG-DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF-P 353
+ G L AE V +M + G + TY ++I Y ++++ L EM L P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDK-HICPDQYSYAILTEGLCRNGYLTEALKL 412
++ Y +L ++ GD+ E K+L +M+ K H+ D+ +Y L + LCR A L
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 413 HNQILKFDLIEDAFSLNILLNYICK 437
+++ D+ + +LL + K
Sbjct: 460 FEEMISQDITPRHRTCLLLLEEVKK 484
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 38/332 (11%)
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
++ T A ++ +A G EE++ + D + E GL N N +L L + +E+A VL
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
+ HI P+ +++ I G C+ + EAL ++ S ++ C+
Sbjct: 214 LQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
M G PP+ T T++ E+ALR+ M + +P+ Y
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL-TTEMKS 557
N I+ L + +G+++EA + EM
Sbjct: 333 NCLIHTLAR----------------------------------AGRLEEAERVFRVEMPE 358
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI-RPDCITYTTLITHFNKKHHPE 616
LG+S N TYN++I + C + +++A EL+K M + PD TY L+ K+
Sbjct: 359 LGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVV 418
Query: 617 EVIALHDYMILKGVIP-DQKTYDAIVTPFLLA 647
EV L M+ K + D+ TY ++ A
Sbjct: 419 EVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
Y+ ++ L K D K V+ +R KL+ T ++ ++ +G+ +EA G+ +
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
GL N + N L++ LCK E+A+ ++ + + I P+ T+ I + K + EE
Sbjct: 184 FGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 618 VIALHDYMILKGVIPDQKTYDAIV 641
+ M G P +Y I+
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTII 266
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 170/399 (42%), Gaps = 25/399 (6%)
Query: 173 CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAI 232
C ++ N L+ + +L+ + G N+ T+NL I+ + R E
Sbjct: 126 CRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNL-IFQAYLDVRKPEIA 184
Query: 233 TVIYRMLKDGT--FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY-- 288
Y++ D P++ +F +++ G +L+ A+++ + M + G V P SY
Sbjct: 185 LEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDM-AVKGFVVDPVVYSYLM 243
Query: 289 -----NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
NS +G K L +E LG V G Y L+ GY +E++
Sbjct: 244 MGCVKNSDADGVLKLYQEL--KEKLGGFVDDGV-----VYGQLMKGYFMKEMEKEAMECY 296
Query: 344 DEMVERG--LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS-----YAIL 396
+E V + + + YN +L L +G +EA K+ + +H P + + ++
Sbjct: 297 EEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVM 356
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 456
G C G EA+++ Q+ F D S N L+N +C + G M + +
Sbjct: 357 VNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNV 416
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 516
PD YT ++D K G ++ Y M++ + +PNL +YN + L K D AK+
Sbjct: 417 KPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKS 476
Query: 517 LVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM 555
D + + +D + ++ S +G++DE + EM
Sbjct: 477 FFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 181/405 (44%), Gaps = 41/405 (10%)
Query: 39 ICVHLKHRRWSALEQL---------SPKLTTFMVNRVVSEFHN--SPHLALDFYNWVGML 87
+ L+ ++ AL QL +P + T+ N + + + P +AL+ Y
Sbjct: 137 LAAQLRQAKYGALLQLHGFINQAGIAPNIITY--NLIFQAYLDVRKPEIALEHYKLFIDN 194
Query: 88 FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGI-APLELLEALMDESYQHCPAVFD 146
P L+ S ++LV + L++ + + +E+ E + + + P V+
Sbjct: 195 AP--LNPSIATFRILV------------KGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYS 240
Query: 147 ALVRACTQVGATEGAYDVICELRTR--GCLVSVHAWNNFLS-HLVEVNDIDRFWRLYKGM 203
L+ C + +G + EL+ + G + + + + ++ + + + +
Sbjct: 241 YLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAV 300
Query: 204 GSFGHVE-NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFP-----NVVSFNMIIDGA 257
G V + +N + AL + + EA+ + + K+ P N+ +FN++++G
Sbjct: 301 GENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGY 360
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
C G + A++V ++M P+++S+N+++N C L AE++ G+M + +
Sbjct: 361 CAGGKFEEAMEVFRQMGDF---KCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVK 417
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
P TY L+D + G ++E MVE L PN+ VYN + L + G +++A K
Sbjct: 418 PDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA-KS 476
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
DM+ + D +Y + L G L E LK+ +++L D +
Sbjct: 477 FFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTV 521
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 15/343 (4%)
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL--YWLYRHGDME-EA 374
P++ T T++ R L+L + + G+ PNI+ YN I Y R ++ E
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
K+ D + + P ++ IL +GL N L +A+++ + + D + L+
Sbjct: 188 YKLFID--NAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG 245
Query: 435 ICKSXXXXXXXXXXGSMITR--GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
K+ + + G D ++ G ++A+ Y + + +
Sbjct: 246 CVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSK 305
Query: 493 PNLTI--YNSFINGLCKMASTDVAKNLVDELRK-----RKL-LDATTFNTLISGYSNSGQ 544
++ YN + L + D A L D ++K R L ++ TFN +++GY G+
Sbjct: 306 VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
+EA + +M S + +++N L+N LC N EA++L M + ++PD TY
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
L+ K+ +E A + M+ + P+ Y+ + + A
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 159/381 (41%), Gaps = 27/381 (7%)
Query: 275 LMTGNSVW----PNSVSYNSIINGFCKKG--GLLLAEEVLGDMVKAGFEPSVRTYATLID 328
L T +SV+ P + N+++ ++ G LL ++ G + +AG P++ TY +
Sbjct: 116 LYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALL--QLHGFINQAGIAPNIITYNLIFQ 173
Query: 329 GYARWGSLEESLRLCDEMVERG-LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
Y E +L ++ L P+I + ++ L + ++E+A ++ DM K
Sbjct: 174 AYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFV 233
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL---IEDAFSLNILLN-YICKSXXXXX 443
D Y+ L G +N LKL+ Q LK L ++D L+ Y K
Sbjct: 234 VDPVVYSYLMMGCVKNSDADGVLKLY-QELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEA 292
Query: 444 XXXXXGSMITRGLPPDVYTKAT----VIDGNCKLGNTEKALRLYNGMIKMDEQP-----N 494
++ G V A V++ + G ++AL+L++ + K P N
Sbjct: 293 MECYEEAV---GENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVN 349
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTT 553
L +N +NG C + A + ++ K D +FN L++ ++ + EA L
Sbjct: 350 LGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYG 409
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
EM+ + + TY L++ K G +E K M+ +RP+ Y L K
Sbjct: 410 EMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAG 469
Query: 614 HPEEVIALHDYMILKGVIPDQ 634
++ + D M+ K + D+
Sbjct: 470 KLDDAKSFFDMMVSKLKMDDE 490
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 7/305 (2%)
Query: 219 IYALCKECRVVEAITVIYRMLKD-GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
+ L +E V EAI V Y +LKD G +VV+ N ++ G K LD ++ K+M
Sbjct: 152 VKCLSEEGLVEEAIEV-YNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMV--- 207
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
+S +I C G + E+L +K G +P YA LI G+ G+
Sbjct: 208 --ESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYA 265
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
+ M+ FP++ +Y I+ L + EA + ++ DK PD+ Y +
Sbjct: 266 CMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMI 325
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
G C G+L A KL +++K + + F+ N++++ K M+ G
Sbjct: 326 RGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYG 385
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
+ + T+I G C G +++A ++ M + PN YN+ I G CK + L
Sbjct: 386 GTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKL 445
Query: 518 VDELR 522
EL+
Sbjct: 446 YKELK 450
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 140/329 (42%), Gaps = 11/329 (3%)
Query: 142 PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYK 201
P + + V+ ++ G E A +V L+ G SV N+ L ++ +DRFW L+K
Sbjct: 145 PTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHK 204
Query: 202 GMGSFGHVE---NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
M VE + I ALC V E ++ + LK G P + +I G C
Sbjct: 205 EM-----VESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFC 259
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
+ G+ +V ++ M + +P+ Y II G C L A + ++ G+ P
Sbjct: 260 EIGNYACMSEV---LHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAP 316
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
Y T+I G+ G L + +L EM+++G+ PN YN +++ ++ G++
Sbjct: 317 DRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFY 376
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
++M+ S + +G C +G EA ++ + + + +A + N L+ CK
Sbjct: 377 NEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKE 436
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVI 467
+ GL P A ++
Sbjct: 437 NKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 150/360 (41%), Gaps = 6/360 (1%)
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 342
P VS N + + A+ L GF+P + + G +EE++ +
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFLDT---TGFKPEPTLLEQYVKCLSEEGLVEEAIEV 167
Query: 343 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 402
+ + + G+ ++V NS+L + ++ ++ +M++ D L LC
Sbjct: 168 YNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCD 225
Query: 403 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 462
G ++E +L Q LK L + L++ C+ +MI P +Y
Sbjct: 226 GGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYI 285
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
+I G C +A ++ + P+ +Y + I G C+ A+ L E+
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 523 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
K+ + + +N +I G+ G+I EM G ++ NT+I C +G +
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSD 405
Query: 582 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
EA E+ K M G+ P+ ITY LI F K++ E+ + L+ + G+ P Y A+V
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 127/286 (44%), Gaps = 9/286 (3%)
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
E++E+ D C L+RA G Y+++ + +G + + +S
Sbjct: 205 EMVESEFDSERIRC------LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGF 258
Query: 188 VEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNV 247
E+ + + M ++ H ++ + I LC + +EA + + G P+
Sbjct: 259 CEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDR 318
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
V + +I G C+ G L A K+ + M + PN +YN +I+G K+G + L E
Sbjct: 319 VVYTTMIRGFCEKGWLGSARKLWFE---MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAF 375
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
+M++ G+ ++ + T+I G+ G +E+ + M E G+ PN + YN+++ +
Sbjct: 376 YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCK 435
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
+E+ K+ ++ + P +YA L L + + +L L
Sbjct: 436 ENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNLE 481
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 174/394 (44%), Gaps = 34/394 (8%)
Query: 49 SALEQLSPKLTTFMVNRVVS------EFHNSPH---LALDFYNWVGML--FPHSLHSSCT 97
SAL++L+ ++ +V V+ F N LA F+ W G F H+ +
Sbjct: 98 SALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHL 157
Query: 98 LLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGA 157
L+++ E A L++ ++ + Y F+ L+ C + G
Sbjct: 158 LMKIFAE---------------CGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGL 202
Query: 158 TEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
+ + +T H++N L L+ V +Y+ M G +V T+N+
Sbjct: 203 ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNI 262
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
++A + + ++ M+KDG P++ ++N+++ TG+ LA + +N M
Sbjct: 263 VMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH-HLATGNKPLA--ALNLLNHMR 319
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
V P + + ++I+G + G L + + + VK G P V Y +I GY G LE
Sbjct: 320 EVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELE 379
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
++ + EM E+G PN+ YNS++ G +EA +L +M + P+ Y+ L
Sbjct: 380 KAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLV 439
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
L G + EA ++++K D++E ++++
Sbjct: 440 NNLKNAGKVLEA----HEVVK-DMVEKGHYVHLI 468
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 162/404 (40%), Gaps = 82/404 (20%)
Query: 195 RFWRLYKGMGSFGHVENVNTFNLAIYALCKE----CRVVEAITVIYRMLKDGTFPNVVSF 250
+F+ G +F H N + I+A C E CR+++ M+KDG +F
Sbjct: 137 KFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLID------EMIKDGYPTTACTF 190
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
N++I C G LA V+++ + P SYN+I++ +LG
Sbjct: 191 NLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHS------------LLG- 234
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
V+ Y LID W + ++M+E G P+++ YN +++ +R G
Sbjct: 235 ---------VKQYK-LID----W--------VYEQMLEDGFTPDVLTYNIVMFANFRLGK 272
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
+ ++L +M+ PD Y+Y IL L AL L N + + +
Sbjct: 273 TDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
L++ + ++ + G PDV +I G G EKA ++ M +
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG 550
+ PN+ YNS I G C +G+ EA
Sbjct: 393 QLPNVFTYNSMIRGFCM----------------------------------AGKFKEACA 418
Query: 551 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 594
L EM+S G + N V Y+TL+N L G EA E++K M+ +G
Sbjct: 419 LLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 7/321 (2%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ F + Y L+ +A G + RL DEM++ G +N ++ G+
Sbjct: 145 QENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTC---GEAG 201
Query: 373 EASKVLSDMIDKHIC---PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
A V+ I P ++SY + L ++ Q+L+ D + N
Sbjct: 202 LARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYN 261
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
I++ + M+ G PD+YT ++ AL L N M ++
Sbjct: 262 IVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREV 321
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 548
+P + + + I+GL + + K +DE K D + +I+GY + G++++A
Sbjct: 322 GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
+ EM G N TYN++I C G +EA L+K M +G P+ + Y+TL+ +
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNN 441
Query: 609 FNKKHHPEEVIALHDYMILKG 629
E + M+ KG
Sbjct: 442 LKNAGKVLEAHEVVKDMVEKG 462
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 133/351 (37%), Gaps = 52/351 (14%)
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
GLL+ E ++G + F+ R A L + W +E+ R Y+
Sbjct: 109 GLLVREVLVGILRTLSFDNKTRC-AKLAYKFFVWCGGQENFR-----------HTANCYH 156
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK- 418
++ G+ + +++ +MI ++ +L +C G A + Q +K
Sbjct: 157 LLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL---ICTCGEAGLARDVVEQFIKS 213
Query: 419 --FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 476
F+ S N +L+ + M+ G PDV T V+ N +LG T
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 536
++ RL + M+K P+L T+N L+
Sbjct: 274 DRLYRLLDEMVKDGFSPDLY----------------------------------TYNILL 299
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
+ + A L M+ +G+ + + TLI+ L + G E K M + G
Sbjct: 300 HHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCT 359
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
PD + YT +IT + E+ + M KG +P+ TY++++ F +A
Sbjct: 360 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 156/346 (45%), Gaps = 43/346 (12%)
Query: 237 RMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFC 296
+ ++ T P + +FNM++D CK G + ++++M + V P++ ++N + G+C
Sbjct: 224 KRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMR----HRVKPDANTFNVLFFGWC 279
Query: 297 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF---P 353
+ A ++L +M++AG +P TY ID + + G ++E+ L D M+ +G P
Sbjct: 280 RVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAP 339
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
+ ++ L ++ EE +++ MI PD +Y + EG+C + EA K
Sbjct: 340 TAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFL 399
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
++ M +G PPD+ T + C+
Sbjct: 400 DE-----------------------------------MSNKGYPPDIVTYNCFLRVLCEN 424
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTF 532
T++AL+LY M++ P++ YN I+ +M D A N E+ KR + D T+
Sbjct: 425 RKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETY 484
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
+I+G + + EA L E+ + GL +++ + L + G
Sbjct: 485 CAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVG 530
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 196/479 (40%), Gaps = 54/479 (11%)
Query: 50 ALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFT 109
AL++ S LTT +V +++ A F+ W G H H S
Sbjct: 115 ALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAG----HQEHYS-------------- 156
Query: 110 EALSLMRNLIAKEGIAPLELLEALMDESYQHCP--AVFDALVRACTQVGATEGAYDVICE 167
E IA E+++ L Y++ V D L + T DV+ E
Sbjct: 157 -----------HEPIAYNEMIDILSSTKYKNKQFRIVIDML-DYMKRNNKTVVLVDVLLE 204
Query: 168 LRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR 227
+ + C +L+H+ + R +N FN+ + ALCK C
Sbjct: 205 ILRKYC-------ERYLTHVQKFAKRKRI--------RVKTQPEINAFNMLLDALCK-CG 248
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
+V+ + R ++ P+ +FN++ G C+ A+K++++M + G+ P + +
Sbjct: 249 LVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEM-IEAGHK--PENFT 305
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFE---PSVRTYATLIDGYARWGSLEESLRLCD 344
Y + I+ FC+ G + A ++ M+ G P+ +T+A +I A+ EE L
Sbjct: 306 YCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIG 365
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
M+ G P++ Y ++ + ++EA K L +M +K PD +Y LC N
Sbjct: 366 RMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENR 425
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
EALKL+ ++++ + N+L++ + M R DV T
Sbjct: 426 KTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYC 485
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
+I+G ++A L ++ + +++SF+ L ++ + + + ++K
Sbjct: 486 AMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK 544
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 137/310 (44%), Gaps = 5/310 (1%)
Query: 291 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
I+ +C++ + + ++ +P + + L+D + G ++E L M R
Sbjct: 205 ILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR- 263
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
+ P+ +N + + R D ++A K+L +MI+ P+ ++Y + C+ G + EA
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 411 KLHN-QILKFDLIE--DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
L + I K + A + +++ + K+ G MI+ G PDV T VI
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKL 526
+G C ++A + + M P++ YN F+ LC+ TD A L + R
Sbjct: 384 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCA 443
Query: 527 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
T+N LIS + D AF TEM + TY +IN L +EA L
Sbjct: 444 PSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFL 503
Query: 587 MKMMIMQGIR 596
++ ++ +G++
Sbjct: 504 LEEVVNKGLK 513
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 7/259 (2%)
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
P+ ++ +L + LC+ G + E L + ++ + DA + N+L C+
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRR-MRHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
MI G P+ +T ID C+ G ++A L++ MI + +F +
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 508 MASTDVAKNLVDELRKRK-----LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
+A D A+ EL R L D +T+ +I G + ++DEA+ EM + G
Sbjct: 351 LAKNDKAEECF-ELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
+ VTYN + +LC+N +EA +L M+ P TY LI+ F + P+
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 623 DYMILKGVIPDQKTYDAIV 641
M + + D +TY A++
Sbjct: 470 TEMDKRDCVQDVETYCAMI 488
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQID 546
I++ QP + +N ++ LCK + L+ +R R DA TFN L G+
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPK 285
Query: 547 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG---IRPDCITYT 603
+A L EM G TY I+ C+ G +EA +L MI +G P T+
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 604 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
+I K EE L MI G +PD TY ++ +A
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
+ N+LL+ +CK M R + PD T + G C++ + +KA++L M
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR----KLLDATTFNTLISGYSNS 542
I+ +P Y + I+ C+ D A +L D + + A TF +I + +
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 543 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 602
+ +E F L M S G + TY +I +C +EA + + M +G PD +TY
Sbjct: 355 DKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414
Query: 603 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
+ + +E + L+ M+ P +TY+ +++ F
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 202/473 (42%), Gaps = 35/473 (7%)
Query: 47 RWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGMLFPHSLHSS---CTLLQVLV 103
RW + L+P L + ++ + +P AL + FP H+ T++ +L
Sbjct: 5 RWPRV--LTPSLLSQILKK-----QKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILG 57
Query: 104 NSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYD 163
S E M+ +I E + ++S + +VF +++R ++ G E A
Sbjct: 58 KSNRVLE----MKYVI-----------ERMKEDSCECKDSVFASVIRTFSRAGRLEDAIS 102
Query: 164 VICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVEN-VNTFNLAIYAL 222
+ L C+ +++ L +V+ ++++ +++ V + + NL + L
Sbjct: 103 LFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVL 162
Query: 223 CKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL-MTGNSV 281
C+ R A V M G +P+ S+ +++ G C G L+ A ++ M ++
Sbjct: 163 CQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGS 222
Query: 282 WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL- 340
+ V Y +++ C G + A E+LG +++ G + R Y + G+ W S E +
Sbjct: 223 GEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH--WESSSEGIE 280
Query: 341 ---RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
RL E + RG P + Y+++ L+ G + E +VL M K P + Y
Sbjct: 281 RVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKV 340
Query: 398 EGLCRNGYLTEALKLHN-QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-G 455
+ LCR G L EA+ + N ++++ + N+L+ +C M +
Sbjct: 341 KALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVS 400
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 508
+ T T++DG C+ G +A ++ M+ P + Y+ I GLC M
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 166/409 (40%), Gaps = 88/409 (21%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCL-----VSVHAWNNFLSHLVEVNDIDRFWRL 199
FD L++ + E A C + + C + A N + L +VN D ++
Sbjct: 119 FDTLLQEMVKESELEAA----CHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQV 174
Query: 200 YKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML----KDGTFPNVVSFNMIID 255
++ M G + +++ + + C E ++ EA ++Y M + G+ ++V + +++D
Sbjct: 175 FQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLD 234
Query: 256 GACKTGSLDLALKVMKKM-------------NLMTGNSVWPNSV---------------- 286
C G +D A++++ K+ ++ G+ W +S
Sbjct: 235 ALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH--WESSSEGIERVKRLLTETLIR 292
Query: 287 -------SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 339
SY+++ ++G L+ EEVL M GFEP+ Y + R G L+E+
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 340 LRLCD-EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILT 397
+ + + EM++ P + VYN ++ L G EA L M + C ++ +Y L
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
+GLCR+G EA +Q+++ LI+ F
Sbjct: 413 DGLCRDGQFLEA----SQVMEEMLIKSHF------------------------------- 437
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 506
P V T +I G C + +A+ M+ D P +++ + +C
Sbjct: 438 PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 196/451 (43%), Gaps = 25/451 (5%)
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
S+GH N + + I L K RV+E VI RM +D F +I + G L+
Sbjct: 41 SYGH--NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLE 98
Query: 265 LALKVMKKMNLMTGNSV-WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
A+ + K +L N V W S+S+++++ K+ L A + G+E + R
Sbjct: 99 DAISLFK--SLHEFNCVNW--SLSFDTLLQEMVKESELEAACHIFRKYC-YGWEVNSRIT 153
Query: 324 AT--LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
A L+ + + + ++ EM +G +P+ Y ++ G +EEA+ +L M
Sbjct: 154 ALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSM 213
Query: 382 I----DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL--NYI 435
K D Y IL + LC G + +A+++ +IL+ L + + ++
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWE 273
Query: 436 CKSXXXXXXXXXXGSMITRGLPP--DVYTK-ATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
S + RG P D Y+ AT + KL E+ L M +
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLL---AMRSKGFE 330
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDE--LRKRKLLDATTFNTLISGYSNSGQIDEAFG 550
P IY + + LC+ A +++++ ++ L +N LI G + G+ EA G
Sbjct: 331 PTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG 390
Query: 551 LTTEM-KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
+M K + AN TY TL++ LC++G EA ++M+ M+++ P TY +I
Sbjct: 391 YLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
E + + M+ + ++P+ + A+
Sbjct: 451 CDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 5/261 (1%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVND--IDRFWRLYK 201
V+ L+ A G + A +++ ++ +G +++ + E + I+R RL
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
G + +++++ L +E ++VE V+ M G P + + C+ G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 262 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK-AGFEPSV 320
L A+ V+ K +M G+ + P YN +I G C G + A L M K +
Sbjct: 348 KLKEAVSVINK-EMMQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE 405
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
TY TL+DG R G E+ ++ +EM+ + FP + Y+ ++ L EA L +
Sbjct: 406 ETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEE 465
Query: 381 MIDKHICPDQYSYAILTEGLC 401
M+ + + P+ + L E +C
Sbjct: 466 MVSQDMVPESSVWKALAESVC 486
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 150/374 (40%), Gaps = 17/374 (4%)
Query: 282 WPNSVSYNSIINGFCKKG-----GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
WP ++ S+++ KK L L EE G SV YAT+ID + +
Sbjct: 6 WPRVLT-PSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSV--YATMIDILGKSNRV 62
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
E + + M E V+ S++ R G +E+A + + + + S+ L
Sbjct: 63 LEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTL 122
Query: 397 TEGLCRNGYLTEALKLHNQ-ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ + + L A + + +++ +LN+L+ +C+ M +G
Sbjct: 123 LQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG 182
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP----NLTIYNSFINGLCKMAST 511
PD + ++ G C G E+A L M Q ++ +Y ++ LC
Sbjct: 183 CYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEV 242
Query: 512 DVAKNLVDE-LRKRKLLDATTFNTLISGY--SNSGQIDEAFGLTTEMKSLGLSANRVTYN 568
D A ++ + LRK ++ + +G+ S+S I+ L TE G +Y+
Sbjct: 243 DDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYS 302
Query: 569 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 628
+ L + G E +E++ M +G P Y + + +E +++ + +++
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 629 G-VIPDQKTYDAIV 641
G +P Y+ ++
Sbjct: 363 GHCLPTVGVYNVLI 376
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 202/473 (42%), Gaps = 35/473 (7%)
Query: 47 RWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGMLFPHSLHSS---CTLLQVLV 103
RW + L+P L + ++ + +P AL + FP H+ T++ +L
Sbjct: 5 RWPRV--LTPSLLSQILKK-----QKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILG 57
Query: 104 NSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYD 163
S E M+ +I E + ++S + +VF +++R ++ G E A
Sbjct: 58 KSNRVLE----MKYVI-----------ERMKEDSCECKDSVFASVIRTFSRAGRLEDAIS 102
Query: 164 VICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVEN-VNTFNLAIYAL 222
+ L C+ +++ L +V+ ++++ +++ V + + NL + L
Sbjct: 103 LFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVL 162
Query: 223 CKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL-MTGNSV 281
C+ R A V M G +P+ S+ +++ G C G L+ A ++ M ++
Sbjct: 163 CQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGS 222
Query: 282 WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL- 340
+ V Y +++ C G + A E+LG +++ G + R Y + G+ W S E +
Sbjct: 223 GEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH--WESSSEGIE 280
Query: 341 ---RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
RL E + RG P + Y+++ L+ G + E +VL M K P + Y
Sbjct: 281 RVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKV 340
Query: 398 EGLCRNGYLTEALKLHN-QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-G 455
+ LCR G L EA+ + N ++++ + N+L+ +C M +
Sbjct: 341 KALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVS 400
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 508
+ T T++DG C+ G +A ++ M+ P + Y+ I GLC M
Sbjct: 401 CVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 166/409 (40%), Gaps = 88/409 (21%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCL-----VSVHAWNNFLSHLVEVNDIDRFWRL 199
FD L++ + E A C + + C + A N + L +VN D ++
Sbjct: 119 FDTLLQEMVKESELEAA----CHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQV 174
Query: 200 YKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML----KDGTFPNVVSFNMIID 255
++ M G + +++ + + C E ++ EA ++Y M + G+ ++V + +++D
Sbjct: 175 FQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLD 234
Query: 256 GACKTGSLDLALKVMKKM-------------NLMTGNSVWPNSV---------------- 286
C G +D A++++ K+ ++ G+ W +S
Sbjct: 235 ALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH--WESSSEGIERVKRLLTETLIR 292
Query: 287 -------SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 339
SY+++ ++G L+ EEVL M GFEP+ Y + R G L+E+
Sbjct: 293 GAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA 352
Query: 340 LRLCD-EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILT 397
+ + + EM++ P + VYN ++ L G EA L M + C ++ +Y L
Sbjct: 353 VSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLV 412
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
+GLCR+G EA +Q+++ LI+ F
Sbjct: 413 DGLCRDGQFLEA----SQVMEEMLIKSHF------------------------------- 437
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 506
P V T +I G C + +A+ M+ D P +++ + +C
Sbjct: 438 PGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 196/451 (43%), Gaps = 25/451 (5%)
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
S+GH N + + I L K RV+E VI RM +D F +I + G L+
Sbjct: 41 SYGH--NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLE 98
Query: 265 LALKVMKKMNLMTGNSV-WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
A+ + K +L N V W S+S+++++ K+ L A + G+E + R
Sbjct: 99 DAISLFK--SLHEFNCVNW--SLSFDTLLQEMVKESELEAACHIFRKYC-YGWEVNSRIT 153
Query: 324 AT--LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
A L+ + + + ++ EM +G +P+ Y ++ G +EEA+ +L M
Sbjct: 154 ALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSM 213
Query: 382 I----DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL--NYI 435
K D Y IL + LC G + +A+++ +IL+ L + + ++
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWE 273
Query: 436 CKSXXXXXXXXXXGSMITRGLPP--DVYTK-ATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
S + RG P D Y+ AT + KL E+ L M +
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLL---AMRSKGFE 330
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDE--LRKRKLLDATTFNTLISGYSNSGQIDEAFG 550
P IY + + LC+ A +++++ ++ L +N LI G + G+ EA G
Sbjct: 331 PTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG 390
Query: 551 LTTEM-KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
+M K + AN TY TL++ LC++G EA ++M+ M+++ P TY +I
Sbjct: 391 YLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
E + + M+ + ++P+ + A+
Sbjct: 451 CDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 5/261 (1%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVND--IDRFWRLYK 201
V+ L+ A G + A +++ ++ +G +++ + E + I+R RL
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
G + +++++ L +E ++VE V+ M G P + + C+ G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 262 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK-AGFEPSV 320
L A+ V+ K +M G+ + P YN +I G C G + A L M K +
Sbjct: 348 KLKEAVSVINK-EMMQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE 405
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
TY TL+DG R G E+ ++ +EM+ + FP + Y+ ++ L EA L +
Sbjct: 406 ETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEE 465
Query: 381 MIDKHICPDQYSYAILTEGLC 401
M+ + + P+ + L E +C
Sbjct: 466 MVSQDMVPESSVWKALAESVC 486
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 150/374 (40%), Gaps = 17/374 (4%)
Query: 282 WPNSVSYNSIINGFCKKG-----GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
WP ++ S+++ KK L L EE G SV YAT+ID + +
Sbjct: 6 WPRVLT-PSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSV--YATMIDILGKSNRV 62
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
E + + M E V+ S++ R G +E+A + + + + S+ L
Sbjct: 63 LEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTL 122
Query: 397 TEGLCRNGYLTEALKLHNQ-ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ + + L A + + +++ +LN+L+ +C+ M +G
Sbjct: 123 LQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG 182
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP----NLTIYNSFINGLCKMAST 511
PD + ++ G C G E+A L M Q ++ +Y ++ LC
Sbjct: 183 CYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEV 242
Query: 512 DVAKNLVDE-LRKRKLLDATTFNTLISGY--SNSGQIDEAFGLTTEMKSLGLSANRVTYN 568
D A ++ + LRK ++ + +G+ S+S I+ L TE G +Y+
Sbjct: 243 DDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYS 302
Query: 569 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 628
+ L + G E +E++ M +G P Y + + +E +++ + +++
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 629 G-VIPDQKTYDAIV 641
G +P Y+ ++
Sbjct: 363 GHCLPTVGVYNVLI 376
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 199/447 (44%), Gaps = 35/447 (7%)
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
H+ N+ ++N + K +V A V M + +VVS+N ++ G + G+L AL
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEAL 164
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
K+ + + N S+ ++ K L L + G ++ AGF +V ++I
Sbjct: 165 WFYKEFRR---SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSII 221
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
D YA+ G +E + R DEM + +I ++ +++ + GDME A K+ +M +K
Sbjct: 222 DAYAKCGQMESAKRCFDEMTVK----DIHIWTTLISGYAKLGDMEAAEKLFCEMPEK--- 274
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
+ S+ L G R G AL L +++ + + F+ + L
Sbjct: 275 -NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEI 333
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
G MI + P+ +++ID K G+ E + R++ D++ + +N+ I+ L +
Sbjct: 334 HGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR---ICDDKHDCVFWNTMISALAQ 390
Query: 508 MASTDVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK-SLGLSANRV 565
A ++D++ K R + TT +++ S+SG ++E M G+ ++
Sbjct: 391 HGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQE 450
Query: 566 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI----THFNK---KHHPEEV 618
Y LI+LL + GC KELM+ + PD + ++ H N+ K +E+
Sbjct: 451 HYACLIDLLGRAGC---FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADEL 507
Query: 619 IALH-----DYMILKGVIPDQKTYDAI 640
I L Y++L + D ++ +
Sbjct: 508 IKLDPESSAPYILLSSIYADHGKWELV 534
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 133/298 (44%), Gaps = 16/298 (5%)
Query: 315 GFE-PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 373
GF+ P+ LI Y + G ++ ++ D+M R L+ +N+++ + G +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYS----WNNMVSGYVKSGMLVR 131
Query: 374 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 433
A V M ++ D S+ + G ++G L EAL + + + + + FS LL
Sbjct: 132 ARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 434 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 493
KS G ++ G +V ++ID K G E A R ++ M D
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD--- 244
Query: 494 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 553
+ I+ + I+G K+ + A+ L E+ ++ + ++ LI+GY G + A L
Sbjct: 245 -IHIWTTLISGYAKLGDMEAAEKLFCEMPEK---NPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 611
+M +LG+ + T+++ + KE+ MI +RP+ I ++LI ++K
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 183/429 (42%), Gaps = 38/429 (8%)
Query: 223 CKECRVVEAITVIYRMLKDGTF--PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNS 280
C + + ++ I+R LK F PN + N +I K G A KV +M+L
Sbjct: 56 CGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR---- 111
Query: 281 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 340
N S+N++++G+ K G L+ A V M E V ++ T++ GYA+ G+L E+L
Sbjct: 112 ---NLYSWNNMVSGYVKSGMLVRARVVFDSMP----ERDVVSWNTMVIGYAQDGNLHEAL 164
Query: 341 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
E G+ N + +L + ++ + ++ + + +
Sbjct: 165 WFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAY 224
Query: 401 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 460
+ G + A + +++ ++D L++ K M + P
Sbjct: 225 AKCGQMESAKRCFDEMT----VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKN--PVS 278
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 520
+T +I G + G+ +AL L+ MI + +P ++S + +AS K +
Sbjct: 279 WT--ALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGY 336
Query: 521 L-RKRKLLDATTFNTLISGYSNSGQIDEA---FGLTTEMKSLGLSANRVTYNTLINLLCK 576
+ R +A ++LI YS SG ++ + F + + V +NT+I+ L +
Sbjct: 337 MIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC------VFWNTMISALAQ 390
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP---EEVIALHDYMILK-GVIP 632
+G +A ++ MI ++P+ TTL+ N H EE + + M ++ G++P
Sbjct: 391 HGLGHKALRMLDDMIKFRVQPN---RTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVP 447
Query: 633 DQKTYDAIV 641
DQ+ Y ++
Sbjct: 448 DQEHYACLI 456
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 152/357 (42%), Gaps = 40/357 (11%)
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
+YN++I K L ++ DM KA S T+A + YAR ++E++ +M
Sbjct: 130 NYNALIESLGKIKQFKLIWSLVDDM-KAKKLLSKETFALISRRYARARKVKEAIGAFHKM 188
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
E G +N +L L + ++ +A KV M K PD SY IL EG +
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQ---- 244
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
LN+L M G PDV +
Sbjct: 245 --------------------ELNLL-----------RVDEVNREMKDEGFEPDVVAYGII 273
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
I+ +CK E+A+R +N M + + +P+ I+ S INGL + A + +
Sbjct: 274 INAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGF 333
Query: 527 -LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
L+A T+N L+ Y S ++++A+ EM+ G+ N TY+ +++ L + +EA E
Sbjct: 334 PLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYE 393
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ + M P TY ++ F K + I + D M KGV+P + +++T
Sbjct: 394 VYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLIT 447
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 187/463 (40%), Gaps = 45/463 (9%)
Query: 130 LEALMDE-SYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
+E L++E S + PA+ + +++ + G + E +G + +N + L
Sbjct: 81 VETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAE-NQKGFKHTTSNYNALIESLG 139
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
++ W L M + + + TF L + +V EAI ++M + G
Sbjct: 140 KIKQFKLIWSLVDDMKA-KKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESS 198
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
FN ++D K+ ++ A KV KM P+ SY ++ G+ ++ LL +EV
Sbjct: 199 DFNRMLDTLSKSRNVGDAQKVFDKMK---KKRFEPDIKSYTILLEGWGQELNLLRVDEVN 255
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
+M GFEP V Y +I+ + + EE++R +EM +R P+ ++ S++
Sbjct: 256 REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLI------ 309
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
GL L +AL+ + +A +
Sbjct: 310 -----------------------------NGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
N L+ C S M +G+ P+ T ++ ++ +++A +Y
Sbjct: 341 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQT--- 397
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDE 547
M +P ++ Y + C D+A + DE++ + +L F++LI+ + ++DE
Sbjct: 398 MSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDE 457
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
A EM +G+ ++ L L G ++ +L+ M
Sbjct: 458 ACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 193/482 (40%), Gaps = 62/482 (12%)
Query: 51 LEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWV--GMLFPHSLHSSCTLLQVLVNSRWF 108
L + S KL+ ++ V+ + N+ LAL + W F H+ + L++ L + F
Sbjct: 85 LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF 144
Query: 109 TEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICEL 168
SL+ ++ AK+ ++ AL+ Y V +A+ GA+ + E
Sbjct: 145 KLIWSLVDDMKAKKLLSKETF--ALISRRYARARKVKEAI-----------GAFHKMEEF 191
Query: 169 RTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRV 228
G + +N L L + ++ +++ M ++ ++ + + +E +
Sbjct: 192 ---GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248
Query: 229 VEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY 288
+ V M +G P+VV++ +II+ CK + A++ N M + P+ +
Sbjct: 249 LRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF---FNEMEQRNCKPSPHIF 305
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
S+ING + L A E +GF TY L+ Y +E++ + DEM
Sbjct: 306 CSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRL 365
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
+G+ PN Y+ IL+ L R +EA +V M P +Y I+ C L
Sbjct: 366 KGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDM 422
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A+K+ ++ M +G+ P ++ +++I
Sbjct: 423 AIKIWDE-----------------------------------MKGKGVLPGMHMFSSLIT 447
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV---DELRKRK 525
C ++A +N M+ + +P +++ L D +LV D LRK +
Sbjct: 448 ALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKTQ 507
Query: 526 LL 527
L+
Sbjct: 508 LV 509
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 128/324 (39%), Gaps = 43/324 (13%)
Query: 285 SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD 344
S +N +++ K + A++V M K FEP +++Y L++G WG LR+ +
Sbjct: 197 SSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG---WGQELNLLRVDE 253
Query: 345 ---EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 401
EM + G P++V Y I+ + EEA + ++M ++ P + + L GL
Sbjct: 254 VNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLG 313
Query: 402 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 461
L +AL+ + +A + N L+ C S M +G+ P+
Sbjct: 314 SEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNAR 373
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
T ++ ++ +++A +Y M +P ++ Y + C
Sbjct: 374 TYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFC--------------- 415
Query: 522 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
N ++D A + EMK G+ +++LI LC +
Sbjct: 416 -------------------NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLD 456
Query: 582 EAKELMKMMIMQGIRPDCITYTTL 605
EA E M+ GIRP ++ L
Sbjct: 457 EACEYFNEMLDVGIRPPGHMFSRL 480
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 213/521 (40%), Gaps = 67/521 (12%)
Query: 156 GATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDR----FWRLYKGMGSFGHVEN 211
G + A ++ E+ R + + L V D+ R+ K + E
Sbjct: 49 GEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEY 108
Query: 212 VNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMK 271
+ T + YA C + E V++ L+ NV S+ II C+ G + AL
Sbjct: 109 IETKLVIFYAKCDALEIAE---VLFSKLR---VRNVFSWAAIIGVKCRIGLCEGALMGFV 162
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLL----LAEEVLGDMVKAGFEPSVRTYATLI 327
+M N ++P+ N ++ CK G L V G +VK+G E V ++L
Sbjct: 163 EM---LENEIFPD----NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLA 215
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
D Y + G L+++ ++ DE+ +R N V +N+++ ++G EEA ++ SDM + +
Sbjct: 216 DMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
P + + + G + E + H + + D LLN+ CK
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMV 331
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM--------------------- 486
M + DV T +I G + G E A+ + M
Sbjct: 332 FDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Query: 487 --------------IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTF 532
I+ + ++ + ++ ++ K S AK + D ++ L+ +
Sbjct: 388 TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI---LW 444
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
NTL++ Y+ SG EA L M+ G+ N +T+N +I L +NG +EAK++ M
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 593 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
GI P+ I++TT++ + EE I M G+ P+
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 189/423 (44%), Gaps = 23/423 (5%)
Query: 210 ENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKV 269
++V T+NL I ++ V +AI + M + + V+ ++ A +T +L L +V
Sbjct: 338 KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV 397
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
+S + V +++++ + K G ++ A++V V E + + TL+
Sbjct: 398 Q---CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTV----EKDLILWNTLLAA 450
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
YA G E+LRL M G+ PN++ +N I+ L R+G ++EA + M I P+
Sbjct: 451 YAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPN 510
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
S+ + G+ +NG EA+ ++ + L +AFS+ + L+ C
Sbjct: 511 LISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALS-ACAHLASLHIGRTIH 569
Query: 450 SMITRGLPPD--VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
I R L V + +++D K G+ KA +++ + + L + N+ I+
Sbjct: 570 GYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSE----LPLSNAMISAYAL 625
Query: 508 MASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKS-LGLSANRV 565
+ A L L L D T ++S +++G I++A + T++ S +
Sbjct: 626 YGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLE 685
Query: 566 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
Y +++LL G E+A L++ M +PD +L+ NK+ E L DY+
Sbjct: 686 HYGLMVDLLASAGETEKALRLIEEM---PFKPDARMIQSLVASCNKQRKTE----LVDYL 738
Query: 626 ILK 628
K
Sbjct: 739 SRK 741
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 160/382 (41%), Gaps = 45/382 (11%)
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
WN L+ E RL+ GM G NV T+NL I +L + +V EA + +M
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
G PN++S+ +++G + G + A+ ++K M + + PN+ S ++
Sbjct: 504 SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRK---MQESGLRPNAFSITVALSACAHLA 560
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYAT-LIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
L + + G +++ S+ + T L+D YA+ G + ++ +++ L+ + +
Sbjct: 561 SLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA----EKVFGSKLYSELPLS 616
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
N+++ +G+++EA + + + PD + + G + +A+++ I+
Sbjct: 617 NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
R + P + ++D G TEK
Sbjct: 677 ----------------------------------KRSMKPCLEHYGLMVDLLASAGETEK 702
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISG 538
ALRL +M +P+ + S + K T++ L +L + + ++ + T+ +
Sbjct: 703 ALRLIE---EMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNA 759
Query: 539 YSNSGQIDEAFGLTTEMKSLGL 560
Y+ G DE + MK+ GL
Sbjct: 760 YAVEGSWDEVVKMREMMKAKGL 781
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 145/347 (41%), Gaps = 33/347 (9%)
Query: 90 HSLHSSCTLLQVLVNSRWFTEALSLMRNL----IAKEGIAPLELLEALMDESYQHCPAVF 145
L C L L+++ TE L L + + I + + L +MD Y C ++
Sbjct: 369 EKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMD-MYAKCGSIV 427
Query: 146 DA-----------------LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
DA L+ A + G + A + ++ G +V WN + L+
Sbjct: 428 DAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLL 487
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+D ++ M S G + N+ ++ + + + EAI + +M + G PN
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547
Query: 249 SFNMIIDGACKTGSLDLALKVMKKM--NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
S + + SL + + + NL + V + S+++ + K G + AE+
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET----SLVDMYAKCGDINKAEK 603
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
V G + + S +I YA +G+L+E++ L + GL P+ + ++L
Sbjct: 604 VFGSKLYSELPLS----NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACN 659
Query: 367 RHGDMEEASKVLSDMIDKH-ICPDQYSYAILTEGLCRNGYLTEALKL 412
GD+ +A ++ +D++ K + P Y ++ + L G +AL+L
Sbjct: 660 HAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRL 706
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 147/368 (39%), Gaps = 54/368 (14%)
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 342
P+S SY ++ CK G + A ++ +M Y ++ G L ++
Sbjct: 33 PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92
Query: 343 CDEMVERGLFPNIVVY-NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 401
+++ G F Y + L Y D E ++VL K + +S+A + C
Sbjct: 93 HARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVL---FSKLRVRNVFSWAAIIGVKC 149
Query: 402 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX----XXXXXGSMITRGLP 457
R G AL ++L+ ++ D N ++ +CK+ G ++ GL
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPD----NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
V+ +++ D K G + A +++
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVF---------------------------------- 231
Query: 518 VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 577
DE+ R +A +N L+ GY +G+ +EA L ++M+ G+ RVT +T ++
Sbjct: 232 -DEIPDR---NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANM 287
Query: 578 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
G EE K+ + I+ G+ D I T+L+ + K E + D M K V+ T+
Sbjct: 288 GGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV----TW 343
Query: 638 DAIVTPFL 645
+ I++ ++
Sbjct: 344 NLIISGYV 351
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 203/496 (40%), Gaps = 104/496 (20%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
++ +N+AI + + R EA+ V RM + + VS+N +I G + G +LA K+
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSS----VSYNGMISGYLRNGEFELARKLF 118
Query: 271 KKMNLMTGNSVWPNS--VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 328
+M P VS+N +I G+ + L A E+ M E V ++ T++
Sbjct: 119 DEM---------PERDLVSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLS 165
Query: 329 GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 388
GYA+ G ++++ + D M E+ N V +N++L ++ MEEA + + +
Sbjct: 166 GYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALV- 220
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 448
S+ L G + + EA + + + + D S N ++ +S
Sbjct: 221 ---SWNCLLGGFVKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEAR--- 270
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP--------------- 493
+ DV+T ++ G + E+A L++ M + +E
Sbjct: 271 -QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERME 329
Query: 494 ------------NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSN 541
N++ +N+ I G + AKNL D++ KR D ++ +I+GYS
Sbjct: 330 MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR---DPVSWAAMIAGYSQ 386
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTY---------------------------------- 567
SG EA L +M+ G NR ++
Sbjct: 387 SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 446
Query: 568 -NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 626
N L+ + CK G EEA +L K M + D +++ T+I +++ E + + M
Sbjct: 447 GNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 627 LKGVIPDQKTYDAIVT 642
+G+ PD T A+++
Sbjct: 503 REGLKPDDATMVAVLS 518
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 189/430 (43%), Gaps = 36/430 (8%)
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
+WN LS V+ + ++ L+K ++ V ++N + K+ ++VEA M
Sbjct: 190 SWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQFFDSM 245
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
+VVS+N II G ++G +D A ++ + S + ++ ++++G+ +
Sbjct: 246 ----NVRDVVSWNTIITGYAQSGKIDEARQLFDE-------SPVQDVFTWTAMVSGYIQN 294
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
+ A E+ M E + ++ ++ GY + +E + L D M R N+ +
Sbjct: 295 RMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTW 346
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
N+++ + G + EA ++ DK D S+A + G ++G+ EAL+L Q+ +
Sbjct: 347 NTMITGYAQCGKISEAK----NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
+ S + L+ G ++ G + ++ CK G+ E+
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLIS 537
A L+ M D + +N+ I G + +VA + +++ L D T ++S
Sbjct: 463 ANDLFKEMAGKD----IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 538 GYSNSGQIDEAFG-LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
S++G +D+ T + G+ N Y +++LL + G E+A LMK M +
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE--- 575
Query: 597 PDCITYTTLI 606
PD + TL+
Sbjct: 576 PDAAIWGTLL 585
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 111/526 (21%), Positives = 213/526 (40%), Gaps = 90/526 (17%)
Query: 125 APLELLEALMDESYQHCPAVFDALVRACTQ---VGATEGAYDVICELRTRGCLVSVHAWN 181
EL L DE + ++ +++ + +G ++++ E V +WN
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER-------DVCSWN 161
Query: 182 NFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKD 241
LS + +D ++ M +N ++N + A + ++ EA + K
Sbjct: 162 TMLSGYAQNGCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACM----LFKS 213
Query: 242 GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 301
+VS+N ++ G K + A + MN+ + VS+N+II G+ + G +
Sbjct: 214 RENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR-------DVVSWNTIITGYAQSGKI 266
Query: 302 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 361
A ++ + V T+ ++ GY + +EE+ L D+M ER N V +N++
Sbjct: 267 DEARQLFDESPV----QDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAM 318
Query: 362 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
L Y G+ E +K L D++ C + ++ + G + G ++EA L +++ K D
Sbjct: 319 LA-GYVQGERMEMAKELFDVMP---CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 422 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 481
+ + A +I G + G++ +ALR
Sbjct: 375 V---------------------------------------SWAAMIAGYSQSGHSFEALR 395
Query: 482 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYS 540
L+ M + + N + ++S ++ + + ++ K L L K N L+ Y
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 600
G I+EA L EM + V++NT+I ++G E A + M +G++PD
Sbjct: 456 KCGSIEEANDLFKEMAGKDI----VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Query: 601 TYTTLI-----THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
T ++ T K DY GV+P+ + Y +V
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDY----GVMPNSQHYACMV 553
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 171/404 (42%), Gaps = 34/404 (8%)
Query: 51 LEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSR-- 106
LE+LS + +V V+ PHLA+ F+NWV F H + T+L + +R
Sbjct: 146 LEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNL 205
Query: 107 -WFTEALSLMRN------------LIAKEGIAP-----LELLEALMDESYQHCPAVFDAL 148
E +S M LI+ G A L + E + ++ ++ +
Sbjct: 206 DMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIM 265
Query: 149 VRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGH 208
+R+ G + A + E+ +G + + L + + +D + M
Sbjct: 266 IRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICE 325
Query: 209 VENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALK 268
+ + F + + C ++ EA+ +I + + F +++ G C+ + AL+
Sbjct: 326 ISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALE 385
Query: 269 V---MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 325
+ MK+ L +S Y II+G+ ++ + A E + K+G P V TY
Sbjct: 386 IVDIMKRRKL-------DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTE 438
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
++ + E+ L +EM+E G+ P+ V +++ + EA KV S M +K
Sbjct: 439 IMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKG 498
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQI--LKFDLIEDAFS 427
I P SY+I + LCR+ E +K+ NQ+ K + +D FS
Sbjct: 499 IKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFS 542
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 39/287 (13%)
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALC-KE 225
E+R +GCL++ W + + R +K M G + + +TF I LC K+
Sbjct: 703 EMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762
Query: 226 CRVVEAITVIYR-MLKDG----------------------------------TFPNVVSF 250
R VE T +R M++ G FP V++
Sbjct: 763 GRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAY 822
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
++ I C+ G L+ AL ++ G + +Y SI++G ++G L A + +
Sbjct: 823 SIYIRALCRIGKLEEALS---ELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNS 879
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
M + G +P V Y +LI + + LE+ L C +M P++V Y +++ G
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
+EEA +M ++ PD +Y+ LC+ +ALKL +++L
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEML 986
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 150/350 (42%), Gaps = 9/350 (2%)
Query: 279 NSVWPNSVSYN-SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
N NS +YN SI C K + +M + G + T+A +I Y R G
Sbjct: 672 NGYKHNSEAYNMSIKVAGCGKD-FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTN 730
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWL--YRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
++R EM + GL P+ + ++ L + ++EEA++ +MI PD+
Sbjct: 731 IAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQD 790
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDL-IEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
LC G +A + + K + A+S I + +C+ S
Sbjct: 791 YLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYS--IYIRALCRIGKLEEALSELASFEGE 848
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
D YT +++ G + G+ +KAL N M ++ +P + +Y S I K +
Sbjct: 849 RSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKV 908
Query: 515 KNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
++ + T+ +I GY + G+++EA+ M+ G S + TY+ IN
Sbjct: 909 LETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK-HHPEEVIALH 622
LC+ E+A +L+ M+ +GI P I + T+ N++ H IAL
Sbjct: 969 LCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQ 1018
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 166/405 (40%), Gaps = 33/405 (8%)
Query: 29 AAAEDIIFRAICVHLKHRR-WS----ALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNW 83
+A + + + IC L R W ALE+ + + T +V V+ + L F++W
Sbjct: 608 SAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSW 667
Query: 84 VGML--FPHSLHSSCTLLQVLVNSRWFTEALSL---MRN---LIAKEGIA---------- 125
VG + H+ + ++V + F + SL MR LI ++ A
Sbjct: 668 VGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTG 727
Query: 126 ----PLELLEALMDESYQHCPAVFDALVRA-CTQVGA-TEGAYDVICELRTRGCLVSVHA 179
+ + + D + F L+ C + G E A E+ G +
Sbjct: 728 LTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDREL 787
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
++L L EV + +G G V +++ I ALC+ ++ EA++ +
Sbjct: 788 VQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTV-AYSIYIRALCRIGKLEEALSELASFE 846
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
+ + + ++ I+ G + G L AL K+N M P Y S+I F K+
Sbjct: 847 GERSLLDQYTYGSIVHGLLQRGDLQKALD---KVNSMKEIGTKPGVHVYTSLIVYFFKEK 903
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
L E M EPSV TY +I GY G +EE+ M ERG P+ Y+
Sbjct: 904 QLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYS 963
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
+ L + E+A K+LS+M+DK I P ++ + GL R G
Sbjct: 964 KFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREG 1008
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 165/384 (42%), Gaps = 13/384 (3%)
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
KDG V +N ++ A + +LD+ +++ +M N + ++ +I+ + K
Sbjct: 182 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEME---KNGCDKDIRTWTILISVYGKAK 238
Query: 300 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 359
+ V M K+GFE Y +I G + +L EM+E+G+ + Y
Sbjct: 239 KIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYK 298
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHIC--PDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
+L + + ++ + DM+ IC + ++ L + C +G + EAL+L ++
Sbjct: 299 MLLDCIAKSEKVDVVQSIADDMV--RICEISEHDAFGYLLKSFCVSGKIKEALELIRELK 356
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
++ DA IL+ +C++ M R L D +I G + +
Sbjct: 357 NKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVS 415
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLI 536
KAL + + K P ++ Y + L K+ + NL +E+ + + D+ ++
Sbjct: 416 KALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVV 475
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG-- 594
+G+ ++ EA+ + + M+ G+ +Y+ + LC++ +E ++ M
Sbjct: 476 AGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIV 535
Query: 595 IRPDCITYTTLITHFNKKHHPEEV 618
IR D ++ +I+ K E++
Sbjct: 536 IRDDIFSW--VISSMEKNGEKEKI 557
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 105/536 (19%), Positives = 191/536 (35%), Gaps = 73/536 (13%)
Query: 177 VHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIY 236
V + + HL ++ ++ L+ M G + + + RV EA V
Sbjct: 433 VSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFS 492
Query: 237 RMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL----------------MTGN- 279
M + G P S+++ + C++ D +K+ +M+ M N
Sbjct: 493 SMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNG 552
Query: 280 ---------SVWPNSVSYNSIINGFCKKGGLLLAEEVLGD------MVKAGFEPS----- 319
+ S SY +NG K EE++ D + ++ P+
Sbjct: 553 EKEKIHLIKEIQKRSNSYCDELNG-SGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVD 611
Query: 320 ---VRTYATLIDGYARWGSLEESL-----RLCDEMVERGLFPNIVVYNSILYWL------ 365
V+ ++ W +E+L + E+V L + N++L +
Sbjct: 612 KMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKR 671
Query: 366 --YRHG---------------DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
Y+H D ++ + +M + Q ++AI+ R G
Sbjct: 672 NGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNI 731
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYIC--KSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
A++ ++ LI + + L+ +C K MI G PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA-KNLVDELRKRK 525
+ C++GNT+ A + + K+ P Y+ +I LC++ + A L +R
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 526 LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
LLD T+ +++ G G + +A MK +G Y +LI K E+ E
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ M + P +TYT +I + EE M +G PD KTY +
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFI 966
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 143/354 (40%), Gaps = 35/354 (9%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
YN++++ + L + +E++ +M K G + +RT+ LI Y + + + L + ++M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+ G + YN ++ L G + A + +M++K I +Y +L + + ++ +
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
+ + +++ I + + LL C S
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVS----------------------------- 342
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
G ++AL L + + + + + GLC+ A +VD +++RKL
Sbjct: 343 ------GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD 396
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
D+ + +ISGY + +A +K G TY ++ L K E+ L
Sbjct: 397 DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLF 456
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
MI GI PD + T ++ ++ E + M KG+ P K+Y V
Sbjct: 457 NEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFV 510
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 123/297 (41%), Gaps = 2/297 (0%)
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
G + +YN++L +++ +++S+M D ++ IL + + +
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKG 243
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
L + ++ K DA + NI++ +C + M+ +G+ + T ++D
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LD 528
K + + + M+++ E + + C A L+ EL+ +++ LD
Sbjct: 304 IAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD 363
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
A F L+ G + ++ +A + MK L + V Y +I+ + +A E +
Sbjct: 364 AKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFE 422
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
++ G P TYT ++ H K E+ L + MI G+ PD A+V L
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHL 479
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/497 (18%), Positives = 185/497 (37%), Gaps = 85/497 (17%)
Query: 191 NDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSF 250
N + W+++ M G ++++ + LC+ R E I + +M F
Sbjct: 482 NRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIF 541
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
+ +I K G + K++L+ + S SY +NG K EE++ D
Sbjct: 542 SWVISSMEKNGEKE-------KIHLI--KEIQKRSNSYCDELNG-SGKAEFSQEEELVDD 591
Query: 311 ------MVKAGFEPS--------VRTYATLIDGYARWGSLEESL-----RLCDEMVERGL 351
+ ++ P+ V+ ++ W +E+L + E+V L
Sbjct: 592 YNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVL 651
Query: 352 FPNIVVYNSILYWL--------YRHG---------------DMEEASKVLSDMIDKHICP 388
+ N++L + Y+H D ++ + +M +
Sbjct: 652 RHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLI 711
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 448
Q ++AI+ R G A++ ++ LI + + L+ +C+
Sbjct: 712 TQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEK---------- 761
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 508
K N E+A R + MI+ P+ + ++ LC++
Sbjct: 762 -----------------------KGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEV 798
Query: 509 ASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 568
+T AK+ +D L K ++ I G+++EA + ++ TY
Sbjct: 799 GNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYG 858
Query: 569 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 628
++++ L + G ++A + + M G +P YT+LI +F K+ E+V+ M +
Sbjct: 859 SIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGE 918
Query: 629 GVIPDQKTYDAIVTPFL 645
P TY A++ ++
Sbjct: 919 SCEPSVVTYTAMICGYM 935
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 479 ALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLI 536
A+R +N + + D + IYN+ ++ + + D+ LV E+ K D T+ LI
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 596
S Y + +I + + +M+ G + YN +I LC G + A E K M+ +GI
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 291
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
TY L+ K + V ++ D M+ I + + ++ F ++
Sbjct: 292 FGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVS 342
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 4/258 (1%)
Query: 156 GATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGS-FGHVENVNT 214
G E A+ + E+ C +V ++N LS V +D + +K + G ++ T
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 215 FNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
+N I ALC++ + + +++ + K+G P+++SFN +++ + +L ++ + +
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRR---ELFVEGDRIWD 252
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
LM ++ PN SYNS + G + A ++ M G P V TY LI Y
Sbjct: 253 LMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN 312
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
+LEE ++ +EM E+GL P+ V Y ++ L + GD++ A +V + I + Y
Sbjct: 313 NLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYK 372
Query: 395 ILTEGLCRNGYLTEALKL 412
+ E L G + EA +L
Sbjct: 373 PVVERLMGAGKIDEATQL 390
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML-KDGTFPNVVSFNMIIDG 256
+L+ M V +FN + A ++ EA+ + K G P++V++N +I
Sbjct: 143 KLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKA 202
Query: 257 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 316
C+ GS+D L + +++ N P+ +S+N+++ F ++ + + + M
Sbjct: 203 LCRKGSMDDILSIFEELE---KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNL 259
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 376
P++R+Y + + G R ++L L D M G+ P++ YN+++ ++EE K
Sbjct: 260 SPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMK 319
Query: 377 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
++M +K + PD +Y +L LC+ G L A+++ + +K L+
Sbjct: 320 CYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 97/191 (50%), Gaps = 2/191 (1%)
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
V SFN ++ + LD A+K K++ G + P+ V+YN++I C+KG +
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLG--ITPDLVTYNTMIKALCRKGSMDDILS 214
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ ++ K GFEP + ++ TL++ + R E R+ D M + L PNI YNS + L
Sbjct: 215 IFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLT 274
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
R+ +A ++ M + I PD ++Y L + L E +K +N++ + L D
Sbjct: 275 RNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTV 334
Query: 427 SLNILLNYICK 437
+ +L+ +CK
Sbjct: 335 TYCMLIPLLCK 345
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 39/273 (14%)
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK-HICP 388
Y G E + +L DEM E + +N++L ++EA K ++ +K I P
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 448
D +Y + + LCR G + + L + ++ K D S N LL
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLE--------------- 236
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 508
+ Y + ++G+ R+++ M + PN+ YNS + GL +
Sbjct: 237 ----------EFYRRELFVEGD----------RIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 509 ASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
A NL+D ++ + D T+N LI+ Y ++E EMK GL+ + VTY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGI--RPD 598
LI LLCK G + A E+ + I + RP+
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN 369
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 5/235 (2%)
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMV-KAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
S+N++++ + L A + ++ K G P + TY T+I R GS+++ L + +E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
+ + G P+++ +N++L YR E ++ M K++ P+ SY GL RN
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
T+AL L + + + D + N L+ M +GL PD T
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMD--EQPNLTIYNSFINGLCKMASTDVAKNLV 518
+I CK G+ ++A+ + IK +PN+ Y + L D A LV
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--YKPVVERLMGAGKIDEATQLV 391
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 551
P+L YN+ I LC+ S D ++ +EL K D +FNTL+ + E +
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 552 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 611
MKS LS N +YN+ + L +N +A L+ +M +GI PD TY LIT +
Sbjct: 251 WDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRV 310
Query: 612 KHHPEEVIALHDYMILKGVIPDQKTY 637
++ EEV+ ++ M KG+ PD TY
Sbjct: 311 DNNLEEVMKCYNEMKEKGLTPDTVTY 336
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 23/256 (8%)
Query: 90 HSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALV 149
++ S LL VNS+ EA+ + L K GI P +L+ ++ ++
Sbjct: 155 RTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP-DLV-------------TYNTMI 200
Query: 150 RACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVN---DIDRFWRLYKGMGSF 206
+A + G+ + + EL G + ++N L + DR W L M S
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDL---MKSK 257
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
N+ ++N + L + + +A+ +I M +G P+V ++N +I +L+
Sbjct: 258 NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE-- 315
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
+VMK N M + P++V+Y +I CKKG L A EV + +K Y +
Sbjct: 316 -EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPV 374
Query: 327 IDGYARWGSLEESLRL 342
++ G ++E+ +L
Sbjct: 375 VERLMGAGKIDEATQL 390
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 36/150 (24%)
Query: 531 TFNTLISGYSNSGQIDEAFGLTTEM-KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 589
+FN L+S Y NS ++DEA E+ + LG++ + VTYNT+I LC+ G ++ + +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 590 MIMQGIRPDCITYTTLITHFNKKH-----------------HPE---------------- 616
+ G PD I++ TL+ F ++ P
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 617 --EVIALHDYMILKGVIPDQKTYDAIVTPF 644
+ + L D M +G+ PD TY+A++T +
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAY 308
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 106/247 (42%), Gaps = 2/247 (0%)
Query: 403 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVY 461
+G A KL +++ + + S N LL+ S + + G+ PD+
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
T T+I C+ G+ + L ++ + K +P+L +N+ + + + D +
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 522 RKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
+ + L + ++N+ + G + + + +A L MK+ G+S + TYN LI +
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
EE + M +G+ PD +TY LI KK + + + + I ++ Y +
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPV 374
Query: 641 VTPFLLA 647
V + A
Sbjct: 375 VERLMGA 381
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 136/663 (20%), Positives = 282/663 (42%), Gaps = 65/663 (9%)
Query: 21 GKRFSNPTAAAEDIIFRAICVHLKHRRWS-ALEQLSPKLTTFM----VNRVVSEFHN--- 72
G++ S + A ++ R++C H R S +L + PKL + +N +V E+
Sbjct: 558 GQKLSRRSFA---VLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGF 614
Query: 73 SPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALSL------------------ 114
S H L F+ V M P + +L++ + L++
Sbjct: 615 SRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGD 674
Query: 115 MRNLIAKEGIAP--LELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRG 172
+ N + ++G+ ++L E + V T +G + A+ V+ L G
Sbjct: 675 LWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEG 734
Query: 173 CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAI 232
C+V +N+ + L + + M H+ ++ + + I LC+ + A
Sbjct: 735 CIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAF 794
Query: 233 TVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII 292
+ ++ D ++ + +I G G + L ++ +M N + + YN +
Sbjct: 795 NLAEQI--DSSYVHYA----LIKGLSLAGKM---LDAENQLRIMLSNGLSSYNKIYNVMF 845
Query: 293 NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 352
G+CK + EEVLG MV+ SV++Y Y R LE + E L
Sbjct: 846 QGYCKGNNWMKVEEVLGLMVRKNIICSVKSYRE----YVRKMCLEPQSLSAISLKEFLLL 901
Query: 353 PN-----IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+++YN ++++++R + E +KVL +M + + PD+ ++ L G + +
Sbjct: 902 GESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYS 961
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG--LPPDVYTKAT 465
+L+ + ++ + + SL + + +C + M ++G L V +
Sbjct: 962 SSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSV-VQTK 1020
Query: 466 VIDGNCKLGNTEKALRLY-----NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 520
+++ G KA NGM+ PN Y++ I L + D+A +L++
Sbjct: 1021 IVETLISKGEIPKAEDFLTRVTRNGMM----APN---YDNIIKKLSDRGNLDIAVHLLNT 1073
Query: 521 -LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 579
L+ + + +++++++I+G Q+D+A TEM LGLS + T++ L++ C+
Sbjct: 1074 MLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQ 1133
Query: 580 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 639
E++ L+K M+ G P + T+I F + + + + + M G D +T+ +
Sbjct: 1134 VLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWS 1193
Query: 640 IVT 642
+++
Sbjct: 1194 LIS 1196
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/523 (20%), Positives = 219/523 (41%), Gaps = 41/523 (7%)
Query: 110 EALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYD------ 163
+A +M +++ +EG+ ++ +E L+ E +H + + + C +G +D
Sbjct: 148 QACEIMASMLIREGM--VKEVELLLMEMERHGDTMVNEGI-FCDLIGKYVDDFDSRKAVM 204
Query: 164 VICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRL----YKGMGSFGHVENVNTFNLAI 219
+ +R +G + + + LV V+ + +R+ + H+ N+++ I
Sbjct: 205 LFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHM-NIDSIGKVI 263
Query: 220 YALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGN 279
LC + +V EA + +++ G N ++ I G + + L + ++
Sbjct: 264 ELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYE--- 320
Query: 280 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 339
P+ N I++ C++ G A + ++ GF+ T+ LI G ++ +
Sbjct: 321 ---PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRA 377
Query: 340 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 399
+ E++ +G P++ YN+IL L+R G + +L +M + + ++ I+ G
Sbjct: 378 VLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTG 437
Query: 400 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 459
C+ EA ++ N++ + LIE + + L S ++ +
Sbjct: 438 YCKARQFEEAKRIVNKMFGYGLIEASKVEDPL------SEAFSLVGFDPLAVRLKRDNDS 491
Query: 460 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI---NGLCKMASTD---- 512
++KA D LGN L L+ + +++ N+ + S + N L AS D
Sbjct: 492 TFSKAEFFD---DLGN---GLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQ 545
Query: 513 VAKNLVDEL-RKRKLLDATTFNTLISGY-SNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 570
A L+DE+ R + L +F L+ ++ + + L + L + T N L
Sbjct: 546 TALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFL 605
Query: 571 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
+ CK G +K + M+ D +TYT+LI F KK
Sbjct: 606 VQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKE 648
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 102/513 (19%), Positives = 184/513 (35%), Gaps = 63/513 (12%)
Query: 177 VHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIY 236
V N L L +R + + + G ++ TF + I C E + A+ +
Sbjct: 323 VFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLS 382
Query: 237 RMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFC 296
++ G P+V S+N I+ G + G ++ +M N + + ++ ++ G+C
Sbjct: 383 EIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMK---ENGMMLSLSTFKIMVTGYC 439
Query: 297 KKG---------------GLLLAEEVLGDMVKA----GFEP----------SVRTYATLI 327
K GL+ A +V + +A GF+P S + A
Sbjct: 440 KARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFF 499
Query: 328 DGYARWGSLEESLRLCDEMV----ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
D L L ++ V +R + P +NS++ GD++ A ++L +M
Sbjct: 500 DDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMAR 556
Query: 384 KHICPDQYSYAILTEGLCRN-GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
+ S+A+L LC + +L ++ L + K D +LN L+ CK
Sbjct: 557 WGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSR 616
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
M+ P D T ++I CK L ++ + P+L
Sbjct: 617 HSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLW 676
Query: 503 NGLCKMASTDVAKNLVDELRK--------RKLLDATTFNTLISGYSNSGQIDEAFGLTTE 554
N L V K LV+E+ + L + + + G A +
Sbjct: 677 NCL-------VRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKR 729
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
++ G + YN LI LC D A ++ M+ + P + LI + +
Sbjct: 730 LEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANK 789
Query: 615 PEEVIALHD--------YMILKGVIPDQKTYDA 639
L + Y ++KG+ K DA
Sbjct: 790 AGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDA 822
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 141/368 (38%), Gaps = 62/368 (16%)
Query: 291 IINGFCKKGGLLLAE-EVLGD-MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
I G K+ LLL E E GD MV G + LI Y +++ L D M
Sbjct: 158 IREGMVKEVELLLMEMERHGDTMVNEGI------FCDLIGKYVDDFDSRKAVMLFDWMRR 211
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID-----KHICPDQYSYAILTEGLCRN 403
+GL P Y ++ L R E A ++ D ++ H+ D I E LC +
Sbjct: 212 KGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVI--ELLCLD 269
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
+ EA L +++ +L +LN +Y+K
Sbjct: 270 QKVQEARVLARKLV---------ALGCILN------------------------SSIYSK 296
Query: 464 ATVIDGNCKLGNTEKA----LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 519
T+ G EK L + G +K +P++ + N ++ LC+ ++ A ++
Sbjct: 297 ITI-------GYNEKQDFEDLLSFIGEVKY--EPDVFVGNRILHSLCRRFGSERAYVYME 347
Query: 520 ELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
EL D TF LI G I A +E+ S G + +YN +++ L + G
Sbjct: 348 ELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKG 407
Query: 579 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 638
+ ++ M G+ T+ ++T + K EE + + M G+I K D
Sbjct: 408 LWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVED 467
Query: 639 AIVTPFLL 646
+ F L
Sbjct: 468 PLSEAFSL 475
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 200/480 (41%), Gaps = 84/480 (17%)
Query: 226 CRVVEAITVIYRMLKDG-TFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPN 284
C + A + R++ D TFPNV N + K +D+A V++ + + P+
Sbjct: 49 CTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSK---MDMANDVLRLYEQRSRCGIMPD 105
Query: 285 SVSYNSIINGFCKKGGLLLA-------------EEVLGDM-VKAGFEPSVRT-------- 322
+ S+ +I + G L A V+ DM VK S R
Sbjct: 106 AFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQR 165
Query: 323 ----YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
+ +I GY +WG+ EE+ +L D M E ++V + ++ + D+E A K
Sbjct: 166 KGSDWNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYF 221
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
M +K + S+ + G +NG+ +AL+L N +L+ + + + I+++
Sbjct: 222 DRMPEKSVV----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFR 277
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
+ + + + + K ++D + K + + A R++N ++ Q NL +
Sbjct: 278 ADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN---ELGTQRNLVTW 334
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
N+ I+G ++ A+ L D + KR ++ ++N+LI+GY+++GQ A +M
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKRNVV---SWNSLIAGYAHNGQAALAIEFFEDMIDY 391
Query: 559 G------------LSA------------------------NRVTYNTLINLLCKNGCDEE 582
G LSA N Y +LI + + G E
Sbjct: 392 GDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWE 451
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
AK + M + D ++Y TL T F E + L M +G+ PD+ TY +++T
Sbjct: 452 AKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLT 507
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 215/499 (43%), Gaps = 67/499 (13%)
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
++ CT++ A +I + T + V++ + S + ND+ RLY+ G
Sbjct: 45 IISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDV---LRLYEQRSRCG 101
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
+ + +F + I + + + +A+ + K G F + N+I+D K S++ A
Sbjct: 102 IMPDAFSFPVVIKSAGRFGILFQAL-----VEKLGFFKDPYVRNVIMDMYVKHESVESAR 156
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV--LGDMVKAGFEPSVRTYAT 325
KV +++ G+ +N +I+G+ K G EE L DM+ E V ++
Sbjct: 157 KVFDQISQRKGSD-------WNVMISGYWKWGN---KEEACKLFDMMP---ENDVVSWTV 203
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
+I G+A+ LE + + D M E+ ++V +N++L ++G E+A ++ +DM+
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEK----SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
+ P++ ++ I+ + L I + + + F LL+ K
Sbjct: 260 VRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSAR 319
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM---------------- 489
+ G ++ T +I G ++G+ A +L++ M K
Sbjct: 320 RIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNG 376
Query: 490 ----------------DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTF 532
D +P+ S ++ MA ++ +VD +RK ++ L+ + +
Sbjct: 377 QAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY 436
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
+LI Y+ G + EA + EMK + V+YNTL NG E L+ M
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKERDV----VSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 593 QGIRPDCITYTTLITHFNK 611
+GI PD +TYT+++T N+
Sbjct: 493 EGIEPDRVTYTSVLTACNR 511
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 159/347 (45%), Gaps = 24/347 (6%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+VVS+ ++I G K L+ A K +M SV VS+N++++G+ + G A
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRM---PEKSV----VSWNAMLSGYAQNGFTEDAL 249
Query: 306 EVLGDMVKAGFEPSVRTYATLIDG--YARWGSLEESL-RLCDEMVERGLFPNIVVYNSIL 362
+ DM++ G P+ T+ +I + SL SL +L DE R N V ++L
Sbjct: 250 RLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVR---LNCFVKTALL 306
Query: 363 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
+ D++ A ++ +++ + + ++ + G R G ++ A +L + + K +++
Sbjct: 307 DMHAKCRDIQSARRIFNELGTQR---NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV 363
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRG-LPPDVYTKATVIDGNCKLGNTEKALR 481
S N L+ + MI G PD T +V+ + + E
Sbjct: 364 ----SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDC 419
Query: 482 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSN 541
+ + + K + N + Y S I + + AK + DE+++R D ++NTL + ++
Sbjct: 420 IVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER---DVVSYNTLFTAFAA 476
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
+G E L ++MK G+ +RVTY +++ + G +E + + K
Sbjct: 477 NGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFK 523
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 101/235 (42%), Gaps = 49/235 (20%)
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
A+ + +CR +++ I+ L GT N+V++N +I G + G + A ++ M
Sbjct: 304 ALLDMHAKCRDIQSARRIFNEL--GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR- 360
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG-FEPSVRT-------------- 322
N VS+NS+I G+ G LA E DM+ G +P T
Sbjct: 361 ------NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 323 ---------------------YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 361
Y +LI YAR G+L E+ R+ DEM ER ++V YN++
Sbjct: 415 ELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTL 470
Query: 362 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
+GD E +LS M D+ I PD+ +Y + R G L E ++ I
Sbjct: 471 FTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 19/236 (8%)
Query: 159 EGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLA 218
+ A + EL T+ LV+ WN +S + D+ +L+ M NV ++N
Sbjct: 316 QSARRIFNELGTQRNLVT---WNAMISGYTRIGDMSSARQLFDTMPK----RNVVSWNSL 368
Query: 219 IYALCKECRVVEAITVIYRMLKDG-TFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
I + AI M+ G + P+ V+ ++ L+L ++ + +
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIV---DYIR 425
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
N + N Y S+I + + G L A+ V +M E V +Y TL +A G
Sbjct: 426 KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK----ERDVVSYNTLFTAFAANGDGV 481
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD----MIDKHICPD 389
E+L L +M + G+ P+ V Y S+L R G ++E ++ + D + C D
Sbjct: 482 ETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYACMD 537
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 131/573 (22%), Positives = 238/573 (41%), Gaps = 86/573 (15%)
Query: 117 NLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQ-----VGATEGAYDVICELRTR 171
+L+A++GI P++ F +L+++C + +G A + ++
Sbjct: 50 DLMARDGIRPMD-------------SVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPD 96
Query: 172 GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEA 231
L +N+ +S + D + +++ M FG +V +++ + R ++A
Sbjct: 97 SVL-----YNSLISLYSKSGDSAKAEDVFETMRRFGK-RDVVSWSAMMACYGNNGRELDA 150
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGAC-----------------KTG------------- 261
I V L+ G PN + +I AC KTG
Sbjct: 151 IKVFVEFLELGLVPNDYCYTAVIR-ACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 262 --------SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 313
S + A KV KM+ + N V++ +I + G A DMV
Sbjct: 210 DMFVKGENSFENAYKVFDKMSEL-------NVVTWTLMITRCMQMGFPREAIRFFLDMVL 262
Query: 314 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW-LYRHGDME 372
+GFE T +++ A +L +L + GL ++ +Y G ++
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVD 322
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL-TEALKLHNQILKFDLIE-DAFSLNI 430
+ KV M D + S+ L G +N L TEA+ L ++++ +E + F+ +
Sbjct: 323 DCRKVFDRMEDHSV----MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
G RGL + +VI K E A R + +
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL---- 434
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 549
+ NL YN+F++G C+ + + A L+ E+ +R+L + A TF +L+SG +N G I +
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 550 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 609
+ +++ LGLS N+ N LI++ K G + A + M + + I++T++IT F
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV----ISWTSMITGF 550
Query: 610 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
K V+ + MI +GV P++ TY AI++
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 175/394 (44%), Gaps = 29/394 (7%)
Query: 176 SVHAWNNFLS-HLVEVNDIDRFWRLYKGMGSFGHVE-NVNTFNLAIYALCKECRVVEAIT 233
SV +W ++ ++ N L+ M + GHVE N TF+ A A
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
V+ + K G N N +I K+ ++ A + + ++ N VSYN+ ++
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-------EKNLVSYNTFLD 447
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
G C+ A ++L ++ + S T+A+L+ G A GS+ + ++ ++V+ GL
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
N V N+++ + G ++ AS+V + M ++++ S+ + G ++G+ L+
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNV----ISWTSMITGFAKHGFAIRVLETF 563
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT-RGLPPDVYTKATVIDGNCK 472
NQ+++ + + + +L+ SM + P + A ++D C+
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 473 LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVAKNLVDELRKRKLL---- 527
G A N M Q ++ ++ +F+ G C++ S T++ K L RK+L
Sbjct: 624 AGLLTDAFEFIN---TMPFQADVLVWRTFL-GACRVHSNTELGK-----LAARKILELDP 674
Query: 528 -DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
+ + L + Y+ +G+ +E+ + +MK L
Sbjct: 675 NEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 147/332 (44%), Gaps = 5/332 (1%)
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
+V + ++F+LAI + ++I+RM P+ +F ++ + G D A+
Sbjct: 87 YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAV 146
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
K+ M+ + + + S+N+I++ CK + A E+ ++ F TY ++
Sbjct: 147 KLFLNMH---EHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVIL 202
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
+G+ ++L + EMVERG+ PN+ YN++L +R G + A + +M +
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
D +Y + G G + A + +++++ ++ + N ++ +CK
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
M+ RG P+V T +I G G + L M +PN YN I +
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSE 382
Query: 508 MASTDVAKNLVDELRKRKLL-DATTFNTLISG 538
+ + A L +++ L + T+N LISG
Sbjct: 383 CSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 37/326 (11%)
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
PS +T+A + + YA G +++++L M E G F ++ +N+IL
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTIL--------------- 168
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
+ LC++ + +A +L + L+ D + N++LN C
Sbjct: 169 --------------------DVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCL 207
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
M+ RG+ P++ T T++ G + G A + M K D + ++
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 498 YNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK 556
Y + ++G A+N+ DE+ R+ L T+N +I ++ A + EM
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 616
G N TYN LI L G +ELM+ M +G P+ TY +I ++++ E
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 387
Query: 617 EVIALHDYMILKGVIPDQKTYDAIVT 642
+ + L + M +P+ TY+ +++
Sbjct: 388 KALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 33/291 (11%)
Query: 142 PAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYK 201
P F + G + A + + GC + ++N L L + +++ + L++
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 202 GMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
+ V+ V T+N+ + C R +A+ V+ M++ G PN+ ++N ++ G + G
Sbjct: 186 ALRGRFSVDTV-TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244
Query: 262 SLDLALKV---MKK-----------------------------MNLMTGNSVWPNSVSYN 289
+ A + MKK + M V P+ +YN
Sbjct: 245 QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 304
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
++I CKK + A + +MV+ G+EP+V TY LI G G L M
Sbjct: 305 AMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE 364
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
G PN YN ++ + ++E+A + M P+ +Y IL G+
Sbjct: 365 GCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 139/345 (40%), Gaps = 32/345 (9%)
Query: 38 AICVHLKHRRWSALEQL-------SPKLTTFMVNRVVSEFHNSPHLALD-FYNWVGMLFP 89
A +HL WS + ++ SPK + R S P A+ F N
Sbjct: 101 AARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASA--GKPDKAVKLFLNMHEHGCF 158
Query: 90 HSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALV 149
L S T+L VL S+ +A L R L + + + ++ ++
Sbjct: 159 QDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV----------------TYNVIL 202
Query: 150 RACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHV 209
+ T A +V+ E+ RG ++ +N L I W + M
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 210 ENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKV 269
+V T+ ++ + A V M+++G P+V ++N +I CK +++ A+ +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
++M PN +YN +I G G EE++ M G EP+ +TY +I
Sbjct: 323 FEEM---VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRY 379
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY---RHGDM 371
Y+ +E++L L ++M PN+ YN ++ ++ R DM
Sbjct: 380 YSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDM 424
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%)
Query: 420 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
+ + DA S ++ ++ + M + + P T A V + G +KA
Sbjct: 86 EYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKA 145
Query: 480 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGY 539
++L+ M + +L +N+ ++ LCK + A L LR R +D T+N +++G+
Sbjct: 146 VKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGW 205
Query: 540 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
+ +A + EM G++ N TYNT++ + G A E M + D
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 600 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+TYTT++ F + + D MI +GV+P TY+A++
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 166/368 (45%), Gaps = 39/368 (10%)
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
P+V ++N+++ + D+A + +M ++ P+ +Y+++I F K+G A
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMR---QRALAPDRYTYSTLITSFGKEGMFDSA 209
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
L M + + Y+ LI+ R +++ + + G+ P++V YNS++
Sbjct: 210 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 269
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
+ EA ++ +M + + P+ SY+ L N EAL + ++ + + D
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 329
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
+ NI++ DVY +L ++A RL+
Sbjct: 330 LTTCNIMI--------------------------DVY---------GQLDMVKEADRLFW 354
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSG 543
+ KMD +PN+ YN+ + + A +L ++++ + + T+NT+I Y +
Sbjct: 355 SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 414
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
+ ++A L EM+S G+ N +TY+T+I++ K G + A L + + G+ D + Y
Sbjct: 415 EHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQ 474
Query: 604 TLITHFNK 611
T+I + +
Sbjct: 475 TMIVAYER 482
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 200/461 (43%), Gaps = 9/461 (1%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
SV A+N L +++ D L+ M + T++ I + KE A++ +
Sbjct: 154 SVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 213
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
+M +D ++V ++ +I+ + + A+ + ++ + + P+ V+YNS+IN +
Sbjct: 214 QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK---RSGITPDLVAYNSMINVY 270
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
K A ++ +M +AG P+ +Y+TL+ Y E+L + EM E ++
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 330
Query: 356 VVYNSILYWLYRHGDM-EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN 414
N I+ +Y DM +EA ++ + I P+ SY + EA+ L
Sbjct: 331 TTCN-IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389
Query: 415 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 474
+ + D+ ++ + N ++ K+ M +RG+ P+ T +T+I K G
Sbjct: 390 LMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 475 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNT 534
++A L+ + + + +Y + I ++ AK L+ EL KL D T
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL---KLPDNIPRET 506
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 594
I+ + +G+ +EA + + G + + +INL +N E+ + M G
Sbjct: 507 AITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAG 566
Query: 595 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG-VIPDQ 634
PD ++ + K+ E+ ++ M +G V PD+
Sbjct: 567 YFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDE 607
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 7/323 (2%)
Query: 164 VICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALC 223
+I E+ G L + +++ LS VE + ++ M ++ T N+ I
Sbjct: 282 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYG 341
Query: 224 KECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP 283
+ V EA + + + K PNVVS+N I+ G +L + + LM +
Sbjct: 342 QLDMVKEADRLFWSLRKMDIEPNVVSYNTILRV---YGEAELFGEAIHLFRLMQRKDIEQ 398
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
N V+YN++I + K A ++ +M G EP+ TY+T+I + + G L+ + L
Sbjct: 399 NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 458
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
++ G+ + V+Y +++ R G M A ++L ++ PD L +
Sbjct: 459 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL----KLPDNIPRETAITILAKA 514
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
G EA + Q + ++D ++N ++ M T G PD
Sbjct: 515 GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVI 574
Query: 464 ATVIDGNCKLGNTEKALRLYNGM 486
A V++ K EKA +Y M
Sbjct: 575 AMVLNAYGKQREFEKADTVYREM 597
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 551
P++ YN + + + D+A L DE+R+R L D T++TLI+ + G D A
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 552 TTEMKSLGLSANRVTYNTLINLLCKNGCD-EEAKELMKMMIMQGIRPDCITYTTLITHFN 610
+M+ +S + V Y+ LI L + CD +A + + GI PD + Y ++I +
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIEL-SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 611 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
K E L M GV+P+ +Y +++ ++
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV 306
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 221/504 (43%), Gaps = 59/504 (11%)
Query: 177 VHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF--NLAIYALCKECRVVEAITV 234
V WN +S V I RF L + F + + ++F N I K R+ EA+ +
Sbjct: 102 VVTWNTMISGYVSCGGI-RF--LEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 235 IYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIING 294
+M + N VS++ +I G C+ G +D A+ + +KM + +S +++ G
Sbjct: 159 FEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPV-------KDSSPLCALVAG 207
Query: 295 FCKKGGLLLAEEVLGDM--VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE---- 348
K L A VLG + +G E V Y TLI GY + G +E + L D++ +
Sbjct: 208 LIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGD 267
Query: 349 ------RGLF-PNIVVYNSILYWLYRHGDMEEASKVLSDMIDK-------------HICP 388
R F N+V +NS++ + GD+ A + M D+ H+
Sbjct: 268 DHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSR 327
Query: 389 DQYSYAILTEGLCRN---------GYLTEA-LKLHNQILKFDLIEDAFSLNILLNYICKS 438
+ ++A+ +E R+ GY + ++L + + S N ++ K+
Sbjct: 328 MEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKN 387
Query: 439 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 498
M G PD +T +++ + L N ++++ ++K P++ ++
Sbjct: 388 KDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVH 446
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
N+ I + ++ + DE++ ++ + T+N +I GY+ G EA L MKS
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMKLKR--EVITWNAMIGGYAFHGNASEALNLFGSMKSN 504
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAK-ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
G+ + +T+ +++N G +EAK + + MM + I P Y++L+ + + EE
Sbjct: 505 GIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEE 564
Query: 618 VIALHDYMILKGVIPDQKTYDAIV 641
+ + M + PD+ + A++
Sbjct: 565 AMYIITSMPFE---PDKTVWGALL 585
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 184/404 (45%), Gaps = 63/404 (15%)
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS---LEESL 340
N+V++N++I+G+ K+ + A ++ M K V T+ T+I GY G LEE+
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNTMISGYVSCGGIRFLEEAR 125
Query: 341 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
+L DEM R F +N+++ ++ + EA + M +++ S++ + G
Sbjct: 126 KLFDEMPSRDSFS----WNTMISGYAKNRRIGEALLLFEKMPERNAV----SWSAMITGF 177
Query: 401 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM--ITRGLPP 458
C+NG + A+ L ++ ++D+ L L+ + K+ G + G
Sbjct: 178 CQNGEVDSAVVLFRKM----PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRED 233
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYN-----------GMIKMDEQPNLTIYNSFINGLCK 507
VY T+I G + G E A L++ G + N+ +NS I K
Sbjct: 234 LVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLK 293
Query: 508 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM------------ 555
+ A+ L D+++ R D ++NT+I GY + ++++AF L +EM
Sbjct: 294 VGDVVSARLLFDQMKDR---DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMV 350
Query: 556 ---KSLG------------LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 600
S+G + V++N++I KN +EA +L M ++G +PD
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 601 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
T T+L++ + + +H +++K VIPD ++A++T +
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQ-IVVKTVIPDVPVHNALITMY 453
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 196/422 (46%), Gaps = 67/422 (15%)
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFP--NVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
I LCK ++ EA R L DG P +VV++ +I G K G + A ++ +++
Sbjct: 53 IGELCKVGKIAEA-----RKLFDG-LPERDVVTWTHVITGYIKLGDMREARELFDRVDSR 106
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
N V++ ++++G+ + L +AE + +M E +V ++ T+IDGYA+ G +
Sbjct: 107 K------NVVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRI 156
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
+++L L DEM ER NIV +NS++ L + G ++EA + M + D S+ +
Sbjct: 157 DKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAM 208
Query: 397 TEGLCRNGYLTEALKL---------------------HNQILKFDLI------EDAFSLN 429
+GL +NG + EA +L +N+I + D + D S N
Sbjct: 209 VDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWN 268
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
++ ++ + R +V + T+I G + E+AL +++ M++
Sbjct: 269 TMITGFIRNREMNKAC----GLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRD 324
Query: 490 DE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNT--LISGYSNSGQID 546
+PN+ Y S ++ +A V + +L + + T L++ YS SG++
Sbjct: 325 GSVKPNVGTYVSILSACSDLAGL-VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELI 383
Query: 547 EAFGLTTEMKSLGLSANR--VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
A +M GL R +++N++I + +G +EA E+ M G +P +TY
Sbjct: 384 AA----RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLN 439
Query: 605 LI 606
L+
Sbjct: 440 LL 441
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 192/463 (41%), Gaps = 67/463 (14%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVI 235
+V +WN + + ID+ L+ M N+ ++N + AL + R+ EA+ +
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPE----RNIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 236 YRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF 295
RM + +VVS+ ++DG K G +D A ++ M N +S+N++I G+
Sbjct: 195 ERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPER-------NIISWNAMITGY 243
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
+ + A+++ M + F ++ T+I G+ R + ++ L D M E+ N+
Sbjct: 244 AQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEK----NV 295
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMI-DKHICPDQYSYAILTEGLCRNGYLTEALKLHN 414
+ + +++ + + EEA V S M+ D + P+ +Y + L E ++H
Sbjct: 296 ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ 355
Query: 415 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL--PPDVYTKATVIDGNCK 472
I K ++ + LLN KS M GL D+ + ++I
Sbjct: 356 LISKSVHQKNEIVTSALLNMYSKSGELIAAR----KMFDNGLVCQRDLISWNSMIAVYAH 411
Query: 473 LGNTEKALRLYNGMIKMDEQPNLTIY----------------NSFINGLCKMASTDVAKN 516
G+ ++A+ +YN M K +P+ Y F L + S + +
Sbjct: 412 HGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREE 471
Query: 517 ----LVDEL-RKRKLLDATTF-------------NTLISGYSNSGQIDEAFGLTTEMKSL 558
LVD R +L D T F ++S + ++ A + ++
Sbjct: 472 HYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLET 531
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR--PDC 599
G S + TY + N+ NG EEA E+ M +G++ P C
Sbjct: 532 G-SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGC 573
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 184/415 (44%), Gaps = 45/415 (10%)
Query: 224 KECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP 283
K C+ A+ +R K P + +FNM++ + ++ A V++ L+ + +
Sbjct: 444 KACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLR---LVQESGMTA 500
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
+ Y ++I+ K G + EV M +G E ++ T+ LIDG AR G + ++
Sbjct: 501 DCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY 560
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM-IDKH-ICPDQYSYAILTEGLC 401
+ + + P+ VV+N+++ + G ++ A VL++M + H I PD S L + C
Sbjct: 561 GILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC 620
Query: 402 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 461
G + A +++ I K+ + RG P+VY
Sbjct: 621 NAGQVERAKEVYQMIHKYGI--------------------------------RGT-PEVY 647
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN--GLCKMASTDVAKNLVD 519
T A ++ K G+ + A +Y M + D P+ +++ I+ G KM D A ++
Sbjct: 648 TIA--VNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM--LDEAFGILQ 703
Query: 520 ELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
+ + + + L ++++L+ N+ +A L ++KS+ L T N LI LC+
Sbjct: 704 DAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGN 763
Query: 579 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
+A E + + G++P+ ITY+ L+ +K E L GV P+
Sbjct: 764 QLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 156/365 (42%), Gaps = 2/365 (0%)
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKG 202
+ F+ L+ C EGA V+ ++ G + +S + +D + ++
Sbjct: 468 STFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQ 527
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
M + G N++TF I + +V +A + P+ V FN +I ++G+
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
+D A V+ +M T + + P+ +S +++ C G + A+EV + K G +
Sbjct: 588 VDRAFDVLAEMKAET-HPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV 646
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
Y ++ ++ G + + + +M E+ + P+ V +++++ ++EA +L D
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
+ I SY+ L C +AL+L+ +I L ++N L+ +C+
Sbjct: 707 SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLP 766
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
+ T GL P+ T + ++ + + + E + +L + PNL I I
Sbjct: 767 KAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL-IMCRCI 825
Query: 503 NGLCK 507
LCK
Sbjct: 826 TSLCK 830
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 139/323 (43%), Gaps = 3/323 (0%)
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
P++ T+ L+ A +E + + + E G+ + +Y +++ + G ++ +V
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 378 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
M + + + +++ L +G R G + +A + + ++ D N L++ +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 438 SXXXXXXXXXXGSMITRGLP--PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 495
S M P PD + ++ C G E+A +Y + K +
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 496 TIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTE 554
+Y +N K D A ++ +++++ + D F+ LI ++ +DEAFG+ +
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 555 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 614
KS G+ ++Y++L+ C ++A EL + + +RP T LIT + +
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 615 PEEVIALHDYMILKGVIPDQKTY 637
+ + D + G+ P+ TY
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITY 787
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 144/337 (42%), Gaps = 17/337 (5%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ GF RTY +++ A+ E + + +EM +GL + + + + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGL-CRNGYLTEA-LKLHNQILKFDLIEDAFSLN- 429
+A + M +Y + I E + C L A L Q+L FD +++ F+ N
Sbjct: 247 KAVGIFELM-------KKYKFKIGVETINCLLDSLGRAKLGKEAQVL-FDKLKERFTPNM 298
Query: 430 ----ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
+LLN C+ MI +GL PD+ +++G + A++L++
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 358
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 544
M PN+ Y I CK +S + A D++ L DA + LI+G+ +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
+D + L EM+ G + TYN LI L+ E A + MI I P T+
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNM 478
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
++ + + E A+ + MI KG+ PD +Y ++
Sbjct: 479 IMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLI 515
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 173/441 (39%), Gaps = 44/441 (9%)
Query: 157 ATEGAYDVICELRTR-GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
A + A+ C R G +N+ +S L + + + + MG+ G + + TF
Sbjct: 174 ARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETF 232
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFP-NVVSFNMIIDGACKTGSLDLALKVMKKMN 274
+A+ A +A+ I+ ++K F V + N ++D + A + K+
Sbjct: 233 TIAMKAFAAAKERKKAVG-IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK 291
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
PN ++Y ++NG+C+ L+ A + DM+ G +P + + +++G R
Sbjct: 292 ----ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR 347
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
++++L M +G PN+ Y ++ + ME A + DM+D + PD Y
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
L G L +L + M +
Sbjct: 408 CLITGFGTQKKLDTVYELLKE-----------------------------------MQEK 432
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G PPD T +I E A R+YN MI+ + +P++ +N + + ++
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMG 492
Query: 515 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
+ + +E+ K+ + D ++ LI G G+ EA EM G+ + YN
Sbjct: 493 RAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 574 LCKNGCDEEAKELMKMMIMQG 594
+ G E +EL + G
Sbjct: 553 FHRGGQPEIFEELAQRAKFSG 573
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 154/362 (42%), Gaps = 3/362 (0%)
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
+S +YNS+++ K VL +M G ++ T+ + +A ++++ +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
+ M + + N +L L R +EA +VL D + + P+ +Y +L G CR
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRV 311
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
L EA ++ N ++ L D + N++L + +S M ++G P+V +
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
+I CK + E A+ ++ M+ QP+ +Y I G D L+ E+++
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 524 R-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 582
+ D T+N LI +N + A + +M + + T+N ++ E
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEM 491
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ + + MI +GI PD +YT LI + E + M+ KG+ Y+
Sbjct: 492 GRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAA 551
Query: 643 PF 644
F
Sbjct: 552 DF 553
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 186/501 (37%), Gaps = 77/501 (15%)
Query: 214 TFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM 273
T+N I K ++ EA RML++G P V+FN +I G L +MK M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 274 NL-------------------------------MTGNSVWPNSVSYNSIINGFCKKGGLL 302
L M + + P+ VSY +++ F + +
Sbjct: 360 KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 303 LAEEVLGDMVKAGFE----------------------------------PSVRTYATLID 328
AE ++ +M E S Y+ ID
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANID 479
Query: 329 GYARWGSLEESLRL---CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
Y G L E+ R+ C E+ +R ++ YN ++ E+A ++ M+
Sbjct: 480 AYGERGYLSEAERVFICCQEVNKR----TVIEYNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
+ PD+ +Y L + L + ++ + + D +++ K
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 505
M+ + PDV +I+ GN ++A+ M + N IYNS I
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 506 CKMASTDVA----KNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
K+ D A + L+ K + D T N +I+ YS + +A + MK G
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-E 714
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
AN T+ ++ + KNG EEA ++ K M I D ++Y +++ F +E +
Sbjct: 715 ANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVET 774
Query: 622 HDYMILKGVIPDQKTYDAIVT 642
M+ G+ PD T+ ++ T
Sbjct: 775 FKEMVSSGIQPDDSTFKSLGT 795
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 198/445 (44%), Gaps = 19/445 (4%)
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKEC 226
+ RT L+S+H NN DI+R +K M G + ++ +YA
Sbjct: 366 DTRTYNILISLHTKNN---------DIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRH 416
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
V EA +I M D + + + + + L+ + K+ ++ GN +S
Sbjct: 417 MVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHV-AGNM---SSE 472
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
Y++ I+ + ++G L AE V + + +V Y +I Y S E++ L + M
Sbjct: 473 GYSANIDAYGERGYLSEAERVF-ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESM 531
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKV-LSDMIDKHICPDQYSYAILTEGLCRNGY 405
+ G+ P+ YN+++ L DM + L M + D Y + + G
Sbjct: 532 MSYGVTPDKCTYNTLVQIL-ASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
L A +++ +++++++ D +L+N + +M G+P + +
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 466 VIDGNCKLGNTEKALRLYNGMIK---MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
+I K+G ++A +Y +++ + P++ N IN + + A+ + D ++
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK 710
Query: 523 KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 582
+R + TF ++ Y +G+ +EA + +M+ + + + ++YN+++ L +G +E
Sbjct: 711 QRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKE 770
Query: 583 AKELMKMMIMQGIRPDCITYTTLIT 607
A E K M+ GI+PD T+ +L T
Sbjct: 771 AVETFKEMVSSGIQPDDSTFKSLGT 795
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 183/445 (41%), Gaps = 21/445 (4%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
NV +N+ + L K C+ ++ M++ G P ++ +ID K G AL +
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG----DMVKAGFEP--SVRTYA 324
KM+ + + P+ V+ ++ + K AEE D KA S TY
Sbjct: 246 GKMSKI---GMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYN 302
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
T+ID Y + G ++E+ M+E G+ P V +N++++ +G + E + ++ M
Sbjct: 303 TMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KL 361
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
H PD +Y IL +N + A ++ L D S LL
Sbjct: 362 HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI--YNSFI 502
M + D YT++ + + EK+ + + N++ Y++ I
Sbjct: 422 EGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFK---RFHVAGNMSSEGYSANI 478
Query: 503 NGLCKMASTDVAKNL---VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 559
+ + A+ + E+ KR +++ +N +I Y S ++A L M S G
Sbjct: 479 DAYGERGYLSEAERVFICCQEVNKRTVIE---YNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 560 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 619
++ ++ TYNTL+ +L + + ++ M G DCI Y +I+ F K
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 620 ALHDYMILKGVIPDQKTYDAIVTPF 644
++ M+ + PD Y ++ F
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAF 620
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 141/320 (44%), Gaps = 2/320 (0%)
Query: 103 VNSRWFTEALSLMRNL-IAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGA 161
VN R E +++ I+K EL E++M ++ LV+
Sbjct: 500 VNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKG 559
Query: 162 YDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYA 221
+ ++R G + + +S V++ ++ +YK M + +V + + I A
Sbjct: 560 RCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINA 619
Query: 222 LCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSV 281
V +A++ + M + G N V +N +I K G LD A + +K+ +
Sbjct: 620 FADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQ 679
Query: 282 WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLR 341
+P+ + N +IN + ++ + AE + M + G E + T+A ++ Y + G EE+ +
Sbjct: 680 YPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQ 738
Query: 342 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 401
+ +M E + + + YNS+L G +EA + +M+ I PD ++ L L
Sbjct: 739 IAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILM 798
Query: 402 RNGYLTEALKLHNQILKFDL 421
+ G +A++ +I K ++
Sbjct: 799 KLGMSKKAVRKIEEIRKKEI 818
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/435 (19%), Positives = 175/435 (40%), Gaps = 44/435 (10%)
Query: 130 LEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVE 189
+ + D+ + P + L+ A + E A +I E+ + + + VE
Sbjct: 390 FKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVE 449
Query: 190 VNDIDRFWRLYK------GMGSFGHVENVNTFN--------------------------- 216
+++ W +K M S G+ N++ +
Sbjct: 450 AEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYN 509
Query: 217 --LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
+ Y + K C +A + M+ G P+ ++N ++ S D+ K +
Sbjct: 510 VMIKAYGISKSCE--KACELFESMMSYGVTPDKCTYNTLVQ---ILASADMPHKGRCYLE 564
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
M + + Y ++I+ F K G L +AEEV +MV+ EP V Y LI+ +A G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI---DKHICPDQY 391
++++++ + M E G+ N V+YNS++ + G ++EA + ++ +K PD Y
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVY 684
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
+ + + +A + + +K + F+ ++L K+ M
Sbjct: 685 TSNCMINLYSERSMVRKAEAIFDS-MKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 452 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 511
+ D + +V+ G ++A+ + M+ QP+ + + S L K+ +
Sbjct: 744 REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMS 803
Query: 512 DVAKNLVDELRKRKL 526
A ++E+RK+++
Sbjct: 804 KKAVRKIEEIRKKEI 818
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 158/402 (39%), Gaps = 41/402 (10%)
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
N + YN ++ K + + +M++ G +P TY TLID Y++ G +L
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL------SDMIDKHICPDQYSYAILT 397
+M + G+ P+ V +L + + ++A + + D H+C Y+Y +
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
+ ++G + EA + ++L+ ++ + N +++ + +M
Sbjct: 306 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CA 364
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
PD T +I + K + E+A + M +P+ Y + + + A+ L
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 518 VDELRKRKL-LDATTFNTLISGYSNSGQIDEA------FGLTTEMKSLGLSAN------- 563
+ E+ + +D T + L Y + ++++ F + M S G SAN
Sbjct: 425 IAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGER 484
Query: 564 --------------------RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
+ YN +I + E+A EL + M+ G+ PD TY
Sbjct: 485 GYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYN 544
Query: 604 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
TL+ P + + M G + D Y A+++ F+
Sbjct: 545 TLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFV 586
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 8/206 (3%)
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI----KMDEQPNLT--IYNSFI 502
G M G+ PD T V+ K +KA + K D L+ YN+ I
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 503 NGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+ K A + + ++ T TFNT+I Y N+GQ+ E L MK L +
Sbjct: 306 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCA 364
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
+ TYN LI+L KN E A K M G++PD ++Y TL+ F+ +H EE L
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 622 HDYMILKGVIPDQKTYDAIVTPFLLA 647
M V D+ T A+ ++ A
Sbjct: 425 IAEMDDDNVEIDEYTQSALTRMYVEA 450
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 7/230 (3%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
V+ L+ A G + A + ++ G + +N+ + +V +D +Y+ +
Sbjct: 612 VYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL 671
Query: 204 ---GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKT 260
+ +V T N I L E +V I+ +K N +F M++ K
Sbjct: 672 LQSCNKTQYPDVYTSNCMI-NLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKN 730
Query: 261 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 320
G + A ++ K+M M + + +SYNS++ F G A E +MV +G +P
Sbjct: 731 GRFEEATQIAKQMREM---KILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDD 787
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
T+ +L + G ++++R +E+ ++ + + ++ S L L GD
Sbjct: 788 STFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGD 837
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 17/337 (5%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ GF + RTY +++ A+ E + + +EM +GL + + + + +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGL-CRNGYLTEA-LKLHNQILKFDLIEDAFSLN- 429
+A + M +Y + I E + C L A L Q+L FD +++ F+ N
Sbjct: 247 KAVGIFELM-------KKYKFKIGVETINCLLDSLGRAKLGKEAQVL-FDKLKERFTPNM 298
Query: 430 ----ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
+LLN C+ MI GL PD+ +++G + A++L++
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 358
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 544
M PN+ Y I CK +S + A D++ L DA + LI+G+ +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
+D + L EM+ G + TYN LI L+ E + MI I P T+
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 478
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
++ + + E A+ D MI KG+ PD +Y ++
Sbjct: 479 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLI 515
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 174/441 (39%), Gaps = 44/441 (9%)
Query: 157 ATEGAYDVICELRTR-GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
A + A+ C R G + +N+ +S L + + + + MG+ G + + TF
Sbjct: 174 ARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETF 232
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFP-NVVSFNMIIDGACKTGSLDLALKVMKKMN 274
+A+ A +A+ I+ ++K F V + N ++D + A + K+
Sbjct: 233 TIAMKAFAAAKERKKAVG-IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK 291
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
PN ++Y ++NG+C+ L+ A + DM+ G +P + + +++G R
Sbjct: 292 ----ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 347
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
++++L M +G PN+ Y ++ + ME A + DM+D + PD Y
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
L G L +L + M +
Sbjct: 408 CLITGFGTQKKLDTVYELLKE-----------------------------------MQEK 432
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G PPD T +I E R+YN MI+ + +P++ +N + + ++
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 492
Query: 515 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
+ + DE+ K+ + D ++ LI G + G+ EA EM G+ + YN
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 574 LCKNGCDEEAKELMKMMIMQG 594
+ G E +EL + G
Sbjct: 553 FHRGGQPEIFEELAQRAKFSG 573
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 151/361 (41%), Gaps = 3/361 (0%)
Query: 285 SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD 344
S +YNS+++ K VL +M G ++ T+ + +A ++++ + +
Sbjct: 195 SRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
M + + N +L L R +EA +VL D + + P+ +Y +L G CR
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVR 312
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 464
L EA ++ N ++ L D + N++L + +S M ++G P+V +
Sbjct: 313 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
+I CK + E A+ ++ M+ QP+ +Y I G D L+ E++++
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 525 -KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
D T+N LI +N + + +M + + T+N ++ E
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 492
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 643
+ + MI +GI PD +YT LI + E + M+ KG+ Y+
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 644 F 644
F
Sbjct: 553 F 553
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 142/337 (42%), Gaps = 17/337 (5%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ GF RTY +++ A+ E + + +EM +GL + + + + +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 245
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGL-CRNGYLTEA-LKLHNQILKFDLIEDAFSLN- 429
+A + M +Y + I E + C L A L Q+L FD +++ F+ N
Sbjct: 246 KAVGIFELM-------KKYKFKIGVETINCLLDSLGRAKLGKEAQVL-FDKLKERFTPNM 297
Query: 430 ----ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
+LLN C+ MI GL PD+ +++G + A++L++
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 357
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 544
M PN+ Y I CK +S + A D++ L DA + LI+G+ +
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 417
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
+D + L EM+ G + TYN LI L+ E + MI I P T+
Sbjct: 418 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 477
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
++ + + E A+ D MI KG+ PD +Y ++
Sbjct: 478 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLI 514
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 173/441 (39%), Gaps = 44/441 (9%)
Query: 157 ATEGAYDVICELRTR-GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
A + A+ C R G +N+ +S L + + + + MG+ G + + TF
Sbjct: 173 ARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETF 231
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFP-NVVSFNMIIDGACKTGSLDLALKVMKKMN 274
+A+ A +A+ I+ ++K F V + N ++D + A + K+
Sbjct: 232 TIAMKAFAAAKERKKAVG-IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK 290
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
PN ++Y ++NG+C+ L+ A + DM+ G +P + + +++G R
Sbjct: 291 ----ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 346
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
++++L M +G PN+ Y ++ + ME A + DM+D + PD Y
Sbjct: 347 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 454
L G L +L + M +
Sbjct: 407 CLITGFGTQKKLDTVYELLKE-----------------------------------MQEK 431
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G PPD T +I E R+YN MI+ + +P++ +N + + ++
Sbjct: 432 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 491
Query: 515 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
+ + DE+ K+ + D ++ LI G + G+ EA EM G+ + YN
Sbjct: 492 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 551
Query: 574 LCKNGCDEEAKELMKMMIMQG 594
+ G E +EL + G
Sbjct: 552 FHRGGQPEIFEELAQRAKFSG 572
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 152/362 (41%), Gaps = 3/362 (0%)
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
+S +YNS+++ K VL +M G ++ T+ + +A ++++ +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 251
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
+ M + + N +L L R +EA +VL D + + P+ +Y +L G CR
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRV 310
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
L EA ++ N ++ L D + N++L + +S M ++G P+V +
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
+I CK + E A+ ++ M+ QP+ +Y I G D L+ E+++
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 430
Query: 524 R-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 582
+ D T+N LI +N + + +M + + T+N ++ E
Sbjct: 431 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 490
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ + MI +GI PD +YT LI + E + M+ KG+ Y+
Sbjct: 491 GRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAA 550
Query: 643 PF 644
F
Sbjct: 551 DF 552
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 181/430 (42%), Gaps = 46/430 (10%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+ ++N ++ G C++G D A + ++M L N + P+SV+ ++I + L L E
Sbjct: 117 DATTWNAMLSGFCQSGHTDKAFSLFREMRL---NEITPDSVTVMTLIQSASFEKSLKLLE 173
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
+ ++ G + V T I Y + G L+ S +L E ++RG +V +NS+
Sbjct: 174 AMHAVGIRLGVDVQVTVANTWISTYGKCGDLD-SAKLVFEAIDRGD-RTVVSWNSMFKAY 231
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
G+ +A + M+ + PD ++ L LT+ +H+ + +D
Sbjct: 232 SVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDI 291
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
++N ++ KS M +R + +I G + G+ ++AL L++
Sbjct: 292 EAINTFISMYSKSEDTCSARLLFDIMTSR----TCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAK--------------------NLVDELRK-- 523
MIK E+P+L S I+G K S + K L+D K
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 524 -----RKLLDAT------TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
R + D T T+ T+I+GY+ +G EA L ++M L N +T+ ++
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQ 467
Query: 573 LLCKNGCDEEAKELMKMM-IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 631
+G E+ E +M + I P Y+ ++ +K EE + L M K
Sbjct: 468 ACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK--- 524
Query: 632 PDQKTYDAIV 641
PD + A++
Sbjct: 525 PDAGIWGALL 534
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 50/343 (14%)
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
ESL L EM G PN + + R D+ V + +I D +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
+ + + A K+ ++ + DA + N +L+ C+S M +
Sbjct: 95 DMFVKCNSVDYAAKVFERMPE----RDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGM----IKMDEQPNLTIYNSFINGLCKMASTDV 513
PD T T+I + EK+L+L M I++ +T+ N++I+ K D
Sbjct: 151 PDSVTVMTLIQS----ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 206
Query: 514 AKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
AK LV E R ++N++ YS G+ +AFGL M + +T INL
Sbjct: 207 AK-LVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD---LSTFINL 262
Query: 574 L--CKN-----------------GCDEEAKELMKMMIMQGIRPD---------------C 599
C+N G D++ + + + M D C
Sbjct: 263 AASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTC 322
Query: 600 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+++T +I+ + +K +E +AL MI G PD T ++++
Sbjct: 323 VSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 114/263 (43%), Gaps = 9/263 (3%)
Query: 286 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
VS+ +I+G+ +KG + A + M+K+G +P + T +LI G ++GSLE +
Sbjct: 323 VSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDAR 382
Query: 346 MVERGL-FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
G N+++ N+++ + G + EA + + +K + ++ + G NG
Sbjct: 383 ADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV----TWTTMIAGYALNG 438
Query: 405 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM-ITRGLPPDVYTK 463
EALKL ++++ D + + +L S M + P +
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY 498
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
+ ++D + G E+AL L M +P+ I+ + +N + +A+ + L
Sbjct: 499 SCMVDLLGRKGKLEEALELIR---NMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFN 555
Query: 524 RKLLDATTFNTLISGYSNSGQID 546
+ A + + + Y+ +G D
Sbjct: 556 LEPQMAAPYVEMANIYAAAGMWD 578
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 147/330 (44%), Gaps = 14/330 (4%)
Query: 92 LHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESY----QHCPAV-FD 146
L + LQ + N T++L I KE A L L + + C V FD
Sbjct: 159 LETQLDKLQFVPNMVHITQSLK-----IVKEVDAALSLFRWAKKQPWYLPSDECYVVLFD 213
Query: 147 ALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSF 206
L + VG +++ + + G L S +A+N + +L + ++ + +K
Sbjct: 214 GLNQGRDFVGIQSLFEEMVQDSSSHGDL-SFNAYNQVIQYLAKAEKLEVAFCCFKKAQES 272
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
G + T+N + + +A + M K + + ++ +II K+G LD A
Sbjct: 273 GCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAA 332
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
K+ ++M + P+ ++S+++ K G L + +V +M G PS + +L
Sbjct: 333 FKLFQQMK---ERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSL 389
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
ID YA+ G L+ +LRL DEM + G PN +Y I+ + G +E A V DM
Sbjct: 390 IDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF 449
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
P +Y+ L E +G + A+K++N +
Sbjct: 450 LPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 154/361 (42%), Gaps = 3/361 (0%)
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
++N +I K L++A KK +G + ++ +YN+++ F KG A E+
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQ-ESGCKI--DTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
M K TY +I A+ G L+ + +L +M ER L P+ V++S++ + +
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 369 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
G ++ + KV +M P + L + + G L AL+L +++ K +
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
+++ KS M G P T + +++ + G + A+++YN M
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEA 548
+P L+ Y S + L DVA ++ E++ + ++ Y +D A
Sbjct: 482 AGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLA 541
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
M S G+ N L KNG + A+ L++ ++ + D + YT+++ H
Sbjct: 542 LKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAH 601
Query: 609 F 609
Sbjct: 602 L 602
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 124/300 (41%), Gaps = 4/300 (1%)
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV---VYNSILYWLYRHGDMEEA 374
PS Y L DG + L +EMV+ + YN ++ +L + +E A
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVA 262
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
+ D +Y L G +A +++ + K D + D + +++
Sbjct: 263 FCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPS 322
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
+ KS M R L P ++++D K G + ++++Y M +P+
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTT 553
T++ S I+ K D A L DE++K + + +I ++ SG+++ A +
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
+M+ G TY+ L+ + +G + A ++ M G+RP +Y +L+T K
Sbjct: 443 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKR 502
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
D T +I K G + A +L+ M + +P+ ++++S ++ + K D + +
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 519 DELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 577
E++ AT F +LI Y+ +G++D A L EMK G N Y +I K+
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431
Query: 578 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
G E A + K M G P TY+ L+ + + +++ M G+ P +Y
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Query: 638 DAIVT 642
+++T
Sbjct: 492 ISLLT 496
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 212/491 (43%), Gaps = 26/491 (5%)
Query: 125 APLELLEALMDESYQHCPAVFDALVRACTQVGATEG---AYDVICELRTRGCLVSVHAWN 181
A ++L L+ E+ Q VF +++RAC G+ E V + G
Sbjct: 83 AAIDLYHRLVSETTQISKFVFPSVLRACA--GSREHLSVGGKVHGRIIKGGVDDDAVIET 140
Query: 182 NFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKD 241
+ L + ++ +++ GM V ++ ++ + + + VV+A+ + M+ D
Sbjct: 141 SLLCMYGQTGNLSDAEKVFDGM----PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDD 196
Query: 242 GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 301
G P+ V+ +++G + G L +A V ++ T + NS++ + K G L
Sbjct: 197 GVEPDAVTMISVVEGCAELGCLRIARSVHGQI---TRKMFDLDETLCNSLLTMYSKCGDL 253
Query: 302 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 361
L +E + + K + ++ +I Y R E++LR EM++ G+ PN+V S+
Sbjct: 254 LSSERIFEKIAK----KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSV 309
Query: 362 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI-LTEGLCRNGYLTEALKLHNQILKFD 420
L G + E V + + + P+ S ++ L E G L++ +L+
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC----ETVLRVV 365
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 480
+ + N L++ M+T+ + PD +T A+ I G
Sbjct: 366 SDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGK 425
Query: 481 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYS 540
+++ +I+ D + NS I+ K S D A + ++++ R ++ T+N+++ G+S
Sbjct: 426 QIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVV---TWNSMLCGFS 481
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 600
+G EA L M L N VT+ +I G E+ K + +I+ G++ D
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLF 540
Query: 601 TYTTLITHFNK 611
T T LI + K
Sbjct: 541 TDTALIDMYAK 551
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 165/382 (43%), Gaps = 54/382 (14%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
N + +LA+ L EC + + R++ D N+V++N +I G + AL +
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSD---RNIVAWNSLISLYAHRGMVIQALGLF 393
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL-LAEEVLGDMVKAGFEPSVRTYATLIDG 329
++M + P++ + S I+ C+ GL+ L +++ G +++ +LID
Sbjct: 394 RQM---VTQRIKPDAFTLASSISA-CENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDM 448
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
Y++ GS++ + + +++ R ++V +NS+L ++G+ EA + M ++ +
Sbjct: 449 YSKSGSVDSASTVFNQIKHR----SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMN 504
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
+ ++ + + G L + +H++
Sbjct: 505 EVTFLAVIQACSSIGSLEKGKWVHHK---------------------------------- 530
Query: 450 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF-INGLCKM 508
+I GL D++T +ID K G+ A ++ M ++ N++ ++G ++
Sbjct: 531 -LIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHG--RI 586
Query: 509 ASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 568
S N + E + + F ++S +SG ++E MKS G+S N +
Sbjct: 587 GSAISTFNQMVESGTKP--NEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFA 644
Query: 569 TLINLLCKNGCDEEAKELMKMM 590
I+LL ++G +EA +K M
Sbjct: 645 CFIDLLSRSGDLKEAYRTIKEM 666
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
+V T+N + + VEAI++ M N V+F +I GSL+ V
Sbjct: 469 SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH 528
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
K+ + ++ ++ ++I+ + K G L AE V +A S+ +++++I+ Y
Sbjct: 529 HKLIISGLKDLFTDT----ALIDMYAKCGDLNAAETVF----RAMSSRSIVSWSSMINAY 580
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
G + ++ ++MVE G PN VV+ ++L G +EE + M + P+
Sbjct: 581 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNS 640
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 433
+A + L R+G L EA + I + + DA L+N
Sbjct: 641 EHFACFIDLLSRSGDLKEA---YRTIKEMPFLADASVWGSLVN 680
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 176/403 (43%), Gaps = 47/403 (11%)
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTG 278
+YA C++ V EA V RM + ++VS+N I+ G + G +AL+++K M
Sbjct: 179 MYAKCRQ--VNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSM---CE 229
Query: 279 NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
++ P+ ++ S++ + + +E+ G +++GF+ V L+D YA+ GSLE
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET 289
Query: 339 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
+ +L D M+ER N+V +NS++ ++ + +EA + M+D+ + P S
Sbjct: 290 ARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 399 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG--------- 449
G L +H ++ L + +N L++ CK G
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 450 ----------------------SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
M +R + PD +T +VI +L T A ++ ++
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDE 547
+ N+ + + ++ K + +A+ + D + +R + TT+N +I GY G
Sbjct: 466 RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV---TTWNAMIDGYGTHGFGKA 522
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
A L EM+ + N VT+ ++I+ +G E + MM
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/399 (18%), Positives = 174/399 (43%), Gaps = 49/399 (12%)
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
V ++ ++ G K LD AL+ +M + V P ++ ++ + L + +E+
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRY---DDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
G +VK+GF + L + YA+ + E+ ++ D M ER ++V +N+I+ +
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQ 213
Query: 368 HGDMEEASKVLSDMIDKHICP----------------------DQYSYAI---------- 395
+G A +++ M ++++ P + + YA+
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 396 ---LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
L + + G L A +L + +L+ +++ S N +++ ++ M+
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVV----SWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 512
G+ P + + LG+ E+ ++ +++ N+++ NS I+ CK D
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 513 VAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
A ++ +L+ R L+ ++N +I G++ +G+ +A ++M+S + + TY ++I
Sbjct: 390 TAASMFGKLQSRTLV---SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Query: 573 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 611
+ + AK + +++ + + T L+ + K
Sbjct: 447 AIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/409 (19%), Positives = 162/409 (39%), Gaps = 26/409 (6%)
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
+ K+G + ++ C+ GS+D A +V + ++ +V Y++++ GF K
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL-------NVLYHTMLKGFAK 112
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
L A + M EP V + L+ L + +V+ G ++
Sbjct: 113 VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
+ + + EA KV M ++ D S+ + G +NG AL++ +
Sbjct: 173 MTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 477
+ +L ++ +L + G + G V ++D K G+ E
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA----KNLVDELRKRKLLDATTFN 533
A +L++GM+ + N+ +NS I+ + + A + ++DE K D +
Sbjct: 289 TARQLFDGML----ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE--GVKPTDVSVMG 342
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
L ++ G ++ + LGL N N+LI++ CK + A + + +
Sbjct: 343 AL-HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 594 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ +++ +I F + P + + M + V PD TY +++T
Sbjct: 402 TL----VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 4/224 (1%)
Query: 183 FLSHLVEVND--IDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLK 240
LSH D I R+ M + G + T ++A+ +LC+ RV EA ++ + +
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 241 DGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG 300
+ P+ ++N ++ CK L + + + +M V P+ VS+ +I+ C
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMR--DDFDVKPDLVSFTILIDNVCNSKN 245
Query: 301 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 360
L A ++ + AGF+P Y T++ G+ E++ + +M E G+ P+ + YN+
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 361 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 404
+++ L + G +EEA L M+D PD +Y L G+CR G
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 10/267 (3%)
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG------DMEE 373
++ + +++ Y + ++++L +++ PN S L H +
Sbjct: 85 LKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ--PNFRPGRSTFLILLSHACRAPDSSISN 142
Query: 374 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 433
+VL+ M++ + PDQ + I LC G + EA L ++ + D ++ N LL
Sbjct: 143 VHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 434 YICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
++CK M + PD+ + +ID C N +A+ L + + +
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 551
P+ +YN+ + G C ++ A + ++++ + D T+NTLI G S +G+++EA
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 552 TTEMKSLGLSANRVTYNTLINLLCKNG 578
M G + TY +L+N +C+ G
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 430 ILLNYICKSXXXXXXX--XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
ILL++ C++ M+ GL PD T + C+ G ++A L +
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL--DATTFNTLISGYSNSGQI 545
+ P+ YN + LCK V VDE+R + D +F LI NS +
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
EA L +++ + G + YNT++ C EA + K M +G+ PD ITY TL
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
I +K EE M+ G PD TY +++
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 4/229 (1%)
Query: 388 PDQYSYAILTEGLCR--NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
P + ++ IL CR + ++ ++ N ++ L D + +I + +C++
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK-MDEQPNLTIYNSFING 504
+ + PPD YT ++ CK + + M D +P+L + I+
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 505 LCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
+C + A LV +L D +NT++ G+ + EA G+ +MK G+ +
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 612
++TYNTLI L K G EEA+ +K M+ G PD TYT+L+ +K
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 222 LCKECRVVEA-ITVIYR----MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
L CR ++ I+ ++R M+ +G P+ V+ ++ + C+TG +D A +MK++
Sbjct: 129 LSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKEL--- 185
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE--PSVRTYATLIDGYARWG 334
T P++ +YN ++ CK L + E + +M + F+ P + ++ LID
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDNVCNSK 244
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
+L E++ L ++ G P+ +YN+I+ EA V M ++ + PDQ +Y
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYN 304
Query: 395 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
L GL + G + EA ++ D + L+N +C+
Sbjct: 305 TLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 131/609 (21%), Positives = 240/609 (39%), Gaps = 44/609 (7%)
Query: 46 RRWSALEQLS-------PKLTTFMVNRVVSEFHNSPH-LALDFYNWVGML--FPHSLHSS 95
R WS L + S ++ +V RV+ F + H LAL F+NW + H S
Sbjct: 26 RIWSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISY 85
Query: 96 CTLLQVLVNSRWFT--EAL-------------SLMRNLI-----AKEGIAPLELLEALMD 135
++ + L SR F+ +AL S+ R+LI ++ + +LE
Sbjct: 86 HSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFS 145
Query: 136 ESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDR 195
+ P V + L+ T G + A + ++R +G ++ + ++ ++ ++
Sbjct: 146 TGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQ 205
Query: 196 FWRLYKGMGSFGHVENVNTFNLAI-YALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
RL + N + L I ++LCK R ++A ++ + P+ +++ +I
Sbjct: 206 LLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIA 265
Query: 255 DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA 314
+ TG+L V+KK + V P S Y + I L A+EV +V
Sbjct: 266 EAFVVTGNLYERQVVLKKKRKL---GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSG 322
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 374
F LI G + ++ MV G P I + + L RH +
Sbjct: 323 KFPMDNDILDALI-GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHL 381
Query: 375 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
K + K + SY+++ LC+ G + E+ ++ K L D N L+
Sbjct: 382 IKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEA 441
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
CK+ M G ++ T +I + G E++LRL++ M++ +P+
Sbjct: 442 CCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPD 501
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKR--KLLDATTFNTLISGYSNSGQIDEAFGLT 552
TIY S I GLCK + A + + +R K + + + ++G EA L
Sbjct: 502 ETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLL 561
Query: 553 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI--TYTTLITHFN 610
E + L + V + L C E + M ++ + P + + L+ F
Sbjct: 562 REREHLEHTGAHV-----VLLKCVADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLASFC 616
Query: 611 KKHHPEEVI 619
P+ ++
Sbjct: 617 SSSDPDSIL 625
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 165/411 (40%), Gaps = 13/411 (3%)
Query: 241 DGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN--------LMTGNSVWPNSVSYNSII 292
D F V S +++D + +D + K + TG + P+ N ++
Sbjct: 102 DALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVC--NRLL 159
Query: 293 NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 352
G G A+++ M G + + I + R + LRL DE+ + L
Sbjct: 160 AGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLN 219
Query: 353 PN-IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
N ++ IL+ L + +A +L ++ + PD +Y ++ E G L E
Sbjct: 220 INGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQV 279
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 471
+ + K + + + + + +++ P D +I G+
Sbjct: 280 VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI-GSV 338
Query: 472 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DAT 530
+ + A+ M+ + P + + LC+ +D + L + +
Sbjct: 339 SAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQ 398
Query: 531 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
+++ +IS +G++ E++ EMK GL+ + YN LI CK AK+L M
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 591 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
++G + + TY LI +++ EE + L D M+ +G+ PD+ Y +++
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLI 509
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 152/356 (42%), Gaps = 7/356 (1%)
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
+S+ YN I++ K +V +M K + +TY L++ YA ++E++ +
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
+ E G+ ++V ++ +L WL R+ +E A + + C D + ++ G C
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC-DIKAMNMILNGWCVL 260
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
G + EA + I+ D S ++N + K +M PDV
Sbjct: 261 GNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKIC 320
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
VID C +AL ++ + + PN+ YNS + LCK+ T+ LV+E+
Sbjct: 321 NNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMEL 380
Query: 524 RK---LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
+ + TF+ L+ S +D + K S YN + L + +
Sbjct: 381 KGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSD---LYNLMFRLYVQWDKE 437
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
E+ +E+ M G+ PD TYT I + K E ++ M+ KG++P+ +T
Sbjct: 438 EKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 156/366 (42%), Gaps = 11/366 (3%)
Query: 126 PLELLEALMDESYQHCPA--VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNF 183
P +L L+ + H + +++ ++ ++ E + V E+ R V+ +
Sbjct: 125 PAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVL 184
Query: 184 LSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGT 243
L+ + +D +++ FG +++ F+ + LC+ + VE ++ +
Sbjct: 185 LNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCR-YKHVEFAETLFCSRRREF 243
Query: 244 FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 303
++ + NMI++G C G++ A + K + + P+ VSY ++IN KKG L
Sbjct: 244 GCDIKAMNMILNGWCVLGNVHEAKRFWKDI---IASKCRPDVVSYGTMINALTKKGKLGK 300
Query: 304 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
A E+ M P V+ +ID + E+L + E+ E+G PN+V YNS+L
Sbjct: 301 AMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLK 360
Query: 364 WLYRHGDMEEASKVLSDMIDK--HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
L + E+ +++ +M K P+ +++ L + R+ + L+ + K ++
Sbjct: 361 HLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKN-KCEM 419
Query: 422 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 481
D + N++ + M GL PD T I G G +AL
Sbjct: 420 TSDLY--NLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALS 477
Query: 482 LYNGMI 487
+ M+
Sbjct: 478 YFQEMM 483
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 151/327 (46%), Gaps = 6/327 (1%)
Query: 175 VSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITV 234
+SV +++ + V ++ + +Y+ + NV N + L K ++ I +
Sbjct: 130 ISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKL 188
Query: 235 IYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIING 294
+M +DG P+VV++N ++ G K + K ++ + + N + +SV Y +++
Sbjct: 189 FDQMKRDGLKPDVVTYNTLLAGCIKVK--NGYPKAIELIGELPHNGIQMDSVMYGTVLAI 246
Query: 295 FCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN 354
G AE + M G P++ Y++L++ Y+ G +++ L EM GL PN
Sbjct: 247 CASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPN 306
Query: 355 IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN 414
V+ ++L + G + + ++LS++ ++ Y +L +GL + G L EA + +
Sbjct: 307 KVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFD 366
Query: 415 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 474
+ + D ++ +I+++ +C+S T D+ T++ C+ G
Sbjct: 367 DMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAG 426
Query: 475 NTEKALRLYNGMIKMDEQPNLTIYNSF 501
E +R+ M KMDEQ YN+F
Sbjct: 427 EMESVMRM---MKKMDEQAVSPDYNTF 450
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 187/440 (42%), Gaps = 7/440 (1%)
Query: 153 TQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENV 212
+ + + + D + L+ ++ V N L +L++ M G + +V
Sbjct: 74 SAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFEWMQQHGKI-SV 132
Query: 213 NTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKK 272
+T++ I + + V +A+ + + + T NV N I+ K G LD +K+ +
Sbjct: 133 STYSSCIKFVGAK-NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQ 191
Query: 273 MNLMTGNSVWPNSVSYNSIINGFCK-KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
M + + P+ V+YN+++ G K K G A E++G++ G + Y T++ A
Sbjct: 192 MK---RDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICA 248
Query: 332 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 391
G EE+ +M G PNI Y+S+L GD ++A +++++M + P++
Sbjct: 249 SNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKV 308
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
L + + G + +L +++ E+ +L++ + K+ M
Sbjct: 309 MMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDM 368
Query: 452 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 511
+G+ D Y + +I C+ ++A L E+ +L + N+ + C+
Sbjct: 369 KGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEM 428
Query: 512 DVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 570
+ ++ ++ ++ + D TF+ LI + A+ T +M S G ++L
Sbjct: 429 ESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSL 488
Query: 571 INLLCKNGCDEEAKELMKMM 590
I L K EA + M+
Sbjct: 489 IYHLGKIRAQAEAFSVYNML 508
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 142/345 (41%), Gaps = 41/345 (11%)
Query: 120 AKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHA 179
AK LE+ +++ DES + ++V+
Sbjct: 144 AKNVSKALEIYQSIPDESTK-----------------------------------INVYI 168
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECR--VVEAITVIYR 237
N+ LS LV+ +D +L+ M G +V T+N + A C + + +AI +I
Sbjct: 169 CNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYN-TLLAGCIKVKNGYPKAIELIGE 227
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
+ +G + V + ++ G + A +++M + G+S PN Y+S++N +
Sbjct: 228 LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKV-EGHS--PNIYHYSSLLNSYSW 284
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
KG A+E++ +M G P+ TL+ Y + G + S L E+ G N +
Sbjct: 285 KGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMP 344
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
Y ++ L + G +EEA + DM K + D Y+ +I+ LCR+ EA +L
Sbjct: 345 YCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSE 404
Query: 418 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 462
D LN +L C++ M + + PD T
Sbjct: 405 TTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNT 449
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 136/326 (41%), Gaps = 37/326 (11%)
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR-WGSLEESLRLCDEMV 347
NSI++ K G L ++ M + G +P V TY TL+ G + +++ L E+
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
G+ + V+Y ++L +G EEA + M + P+ Y Y+ L G
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
+A +L ++ L+ + + LL VY K +
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLK--------------------------VYIKGGLF 323
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
D + +L + L + +E P Y ++GL K + A+++ D+++ + +
Sbjct: 324 DRSRELLS-----ELESAGYAENEMP----YCMLMDGLSKAGKLEEARSIFDDMKGKGVR 374
Query: 528 -DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
D + +IS S + EA L+ + ++ + V NT++ C+ G E +
Sbjct: 375 SDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRM 434
Query: 587 MKMMIMQGIRPDCITYTTLITHFNKK 612
MK M Q + PD T+ LI +F K+
Sbjct: 435 MKKMDEQAVSPDYNTFHILIKYFIKE 460
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 2/230 (0%)
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
+++AL+++ I + + N +L+ + K+ M GL PDV T T
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 466 VIDGNCKLGNT-EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-K 523
++ G K+ N KA+ L + Q + +Y + + ++ A+N + +++ +
Sbjct: 207 LLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVE 266
Query: 524 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ +++L++ YS G +A L TEMKS+GL N+V TL+ + K G + +
Sbjct: 267 GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 326
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
+EL+ + G + + Y L+ +K EE ++ D M KGV D
Sbjct: 327 RELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Query: 475 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFN 533
N KAL +Y + + N+ I NS ++ L K D L D++++ L D T+N
Sbjct: 146 NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYN 205
Query: 534 TLISG-YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
TL++G +A L E+ G+ + V Y T++ + NG EEA+ ++ M +
Sbjct: 206 TLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKV 265
Query: 593 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
+G P+ Y++L+ ++ K ++ L M G++P++
Sbjct: 266 EGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNK 307
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 118/292 (40%), Gaps = 40/292 (13%)
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
SV TY++ I + ++ ++L + + + N+ + NSIL L ++G ++ K+
Sbjct: 131 SVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLF 189
Query: 379 SDMIDKHICPDQYSYAILTEGL--CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 436
M + PD +Y L G +NGY +A++L
Sbjct: 190 DQMKRDGLKPDVVTYNTLLAGCIKVKNGY-PKAIEL------------------------ 224
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
G + G+ D TV+ G +E+A M PN+
Sbjct: 225 -----------IGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIY 273
Query: 497 IYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEM 555
Y+S +N A L+ E++ L+ + TL+ Y G D + L +E+
Sbjct: 274 HYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSEL 333
Query: 556 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
+S G + N + Y L++ L K G EEA+ + M +G+R D + +I+
Sbjct: 334 ESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMIS 385
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 167/419 (39%), Gaps = 50/419 (11%)
Query: 172 GCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVE--NVNTFNLAIYALCKECRVV 229
G + S H +N + L + + D W L M + ++T + + L K +
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYN 220
Query: 230 EAITVIYRMLKD-GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY 288
+A+ M K G + ++ N ++D K S++ A +V K+ +++ P++ ++
Sbjct: 221 KAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL----FDTIKPDARTF 276
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
N +I+GFCK A ++ M F P V TY + ++ Y + G + +EM E
Sbjct: 277 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
G PN+V Y +++ L + + EA V M + PD Y+ L L + G +
Sbjct: 337 NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKD 396
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A ++ ED M +G+ DV T+I
Sbjct: 397 AA---------EIFED--------------------------MTNQGVRRDVLVYNTMIS 421
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQ-----PNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
E ALRL M DE+ PN+ Y + C + L+ + K
Sbjct: 422 AALHHSRDEMALRLLKRM--EDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVK 479
Query: 524 RKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
+ +D +T+ LI G SG+++EA E G+ T L++ L K E
Sbjct: 480 NDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAE 538
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 175/436 (40%), Gaps = 54/436 (12%)
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNM---IIDGACKTGSL 263
G+V + +T+N + L K CR + + + + +V+ + ++ K+G
Sbjct: 161 GYVHSGHTYNAMVDVLGK-CRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKY 219
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV---LGDMVKAGFEPSV 320
+ A+ +M G V ++++ NS+++ K+ + A EV L D +K P
Sbjct: 220 NKAVDAFLEMEKSYG--VKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK----PDA 273
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
RT+ LI G+ + +++ + D M P++V Y S + + GD +++L +
Sbjct: 274 RTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEE 333
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 440
M + P+ +Y I+ L ++ + EAL ++ ++ + + DA + L++ + K+
Sbjct: 334 MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR 393
Query: 441 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ-----PNL 495
M +G+ DV T+I E ALRL M DE+ PN+
Sbjct: 394 FKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM--EDEEGESCSPNV 451
Query: 496 TIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM 555
Y + C + L+ + K N ID +
Sbjct: 452 ETYAPLLKMCCHKKKMKLLGILLHHMVK-----------------NDVSIDVS------- 487
Query: 556 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 615
TY LI LC +G EEA + + +G+ P T L+ KK+
Sbjct: 488 ----------TYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMA 537
Query: 616 EEVIALHDYMILKGVI 631
E + + + K +I
Sbjct: 538 EAKLKIQSLVQSKTMI 553
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%)
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
NS ++ L K S + A + +L DA TFN LI G+ + + D+A + MK
Sbjct: 243 NSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVT 302
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
+ + VTY + + CK G E+++ M G P+ +TYT ++ K E
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEA 362
Query: 619 IALHDYMILKGVIPDQKTYDAIV 641
+ +++ M G +PD K Y +++
Sbjct: 363 LGVYEKMKEDGCVPDAKFYSSLI 385
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 9/263 (3%)
Query: 132 ALMD--ESYQHCPAV--FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
A+MD + + P V + + V A + G +++ E+R GC +V + + L
Sbjct: 294 AMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSL 353
Query: 188 VEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNV 247
+ + +Y+ M G V + ++ I+ L K R +A + M G +V
Sbjct: 354 GKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDV 413
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
+ +N +I A ++AL+++K+M G S PN +Y ++ C K + L +
Sbjct: 414 LVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGIL 473
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
L MVK V TY LI G G +EE+ +E V +G+ P ++ L +
Sbjct: 474 LHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEK 533
Query: 368 HGDMEEASKVLS-----DMIDKH 385
E K+ S MID H
Sbjct: 534 KNMAEAKLKIQSLVQSKTMIDSH 556
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 22/308 (7%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV--ERGLFPNIVVYNSILYWLYRHGD 370
+ G+ S TY ++D + + + L +EM E + + ++ L + G
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 218
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK------LHNQILK-FDLIE 423
+A +M + SY + T+ + N + +K H LK FD I+
Sbjct: 219 YNKAVDAFLEM--------EKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK 270
Query: 424 -DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 482
DA + NIL++ CK+ M PDV T + ++ CK G+ + +
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 483 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSN 541
M + PN+ Y ++ L K A + +++++ + DA +++LI S
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM---IMQGIRPD 598
+G+ +A + +M + G+ + + YNT+I+ + DE A L+K M + P+
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 599 CITYTTLI 606
TY L+
Sbjct: 451 VETYAPLL 458
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 158/396 (39%), Gaps = 20/396 (5%)
Query: 265 LALKVMKKM----NLMTGNSVWPNSVS--------YNSIINGFCKKGGLLLAEEVLGDMV 312
L L+V+++ N G +W NS + YN++++ K L E++ +M
Sbjct: 134 LVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMN 193
Query: 313 KAGFEP--SVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSILYWLYRHG 369
K ++ T + ++ A+ G +++ EM + G+ + + NS++ L +
Sbjct: 194 KNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKEN 253
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
+E A +V + D I PD ++ IL G C+ +A + + + + D +
Sbjct: 254 SIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYT 312
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
+ CK M G P+V T V+ K +AL +Y M +
Sbjct: 313 SFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKED 372
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 548
P+ Y+S I+ L K A + +++ + + D +NT+IS + + + A
Sbjct: 373 GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMA 432
Query: 549 FGLTTEMKSL---GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
L M+ S N TY L+ + C + L+ M+ + D TY L
Sbjct: 433 LRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILL 492
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
I EE + + KG++P T +V
Sbjct: 493 IRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLV 528
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 10/196 (5%)
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKA----LRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
G+ D +++D K + E A L+L++ + +P+ +N I+G CK
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTI-----KPDARTFNILIHGFCKARK 288
Query: 511 TDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
D A+ ++D ++ + D T+ + + Y G + EM+ G + N VTY
Sbjct: 289 FDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTI 348
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
+++ L K+ EA + + M G PD Y++LI +K ++ + + M +G
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 630 VIPDQKTYDAIVTPFL 645
V D Y+ +++ L
Sbjct: 409 VRRDVLVYNTMISAAL 424
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 163/453 (35%), Gaps = 101/453 (22%)
Query: 58 LTTFMVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLM 115
+T +V +V+ F N + A F+ W + HS H+ ++ VL R F L+
Sbjct: 130 VTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELV 189
Query: 116 RNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICEL-RTRGCL 174
N + K + L L+ + ++R + G A D E+ ++ G
Sbjct: 190 -NEMNKNEESKLVTLDTM------------SKVMRRLAKSGKYNKAVDAFLEMEKSYGVK 236
Query: 175 VSVHAWNNFLSHLVEVNDIDR----FWRLYKGMGSFGHVENVNTFNLAIYALCKECR--- 227
A N+ + LV+ N I+ F +L+ + + TFN+ I+ CK +
Sbjct: 237 TDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKP-----DARTFNILIHGFCKARKFDD 291
Query: 228 ----------------VVEAITVIYRMLKDGTF----------------PNVVSFNMIID 255
VV + + K+G F PNVV++ +++
Sbjct: 292 ARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMH 351
Query: 256 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 315
K+ + AL V +KM + P++ Y+S+I+ K G A E+ DM G
Sbjct: 352 SLGKSKQVAEALGVYEKMK---EDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 316 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVER---GLFPNIVVYNSILYW-------- 364
V Y T+I E +LRL M + PN+ Y +L
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMK 468
Query: 365 ----LYRH-----------------------GDMEEASKVLSDMIDKHICPDQYSYAILT 397
L H G +EEA + + K + P + +L
Sbjct: 469 LLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLV 528
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
+ L + LK+ + + +I+ L++
Sbjct: 529 DELEKKNMAEAKLKIQSLVQSKTMIDSHSPLSV 561
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 164/385 (42%), Gaps = 10/385 (2%)
Query: 213 NTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVS-FNMIIDGACKTGSLDLALKVMK 271
+ I L K ++ +V+Y + F S F +I +G ++ A++V
Sbjct: 73 QAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFF 132
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKK-GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
K+ P++ + N+++ +K L L E+L + G T+ LID
Sbjct: 133 KI---PNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDAL 189
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME--EASKVLSDMIDKHICP 388
R G ++ + L M + + + +Y+ +L + +H D + L D+ P
Sbjct: 190 CRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSP 249
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNILLNYICKSXXXXXXXXX 447
Y ++ L G E + + NQ +K D +E D I+L +
Sbjct: 250 GLRDYTVVMRFLVEGGRGKEVVSVLNQ-MKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 308
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
++ GL PDVYT I+G CK + E AL++ + M K+ +PN+ YN I L K
Sbjct: 309 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 368
Query: 508 MASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
AK L E+ + ++ TF+ +IS Y ++ A GL E ++ +
Sbjct: 369 AGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSR 428
Query: 567 YNTLINLLCKNGCDEEAKELMKMMI 591
+I+ LC+ G ++A EL+ ++
Sbjct: 429 IEEVISRLCEKGLMDQAVELLAHLV 453
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 145/332 (43%), Gaps = 6/332 (1%)
Query: 193 IDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAI-TVIYRMLKDGTFPNVVSFN 251
I+ ++ + +F V + T N + L ++ + +E + ++ + + G +F
Sbjct: 124 IEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFG 183
Query: 252 MIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV--LG 309
++ID C+ G +D A ++++ M+ +SV + Y+ +++ CK + + L
Sbjct: 184 ILIDALCRIGEVDCATELVR---YMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLE 240
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
D+ K F P +R Y ++ G +E + + ++M + P++V Y +L +
Sbjct: 241 DLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADE 300
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
D +A K+ +++ + PD Y+Y + GLC+ + ALK+ + + K + + N
Sbjct: 301 DYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYN 360
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
IL+ + K+ M T G+ + +T +I ++ A L M
Sbjct: 361 ILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM 420
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
+ + I+ LC+ D A L+ L
Sbjct: 421 NVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 138/367 (37%), Gaps = 38/367 (10%)
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDM-VKAGFEPSVRTYATLIDGYARWGSLEESLR 341
P +Y +I K L VL + V F+ + +I Y G +EE++
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIE 129
Query: 342 LCDEMVERGLFPNIVVYNSILYWLYR-HGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 400
+ ++ P+ N++L L R +E ++L + ++ ++ IL + L
Sbjct: 130 VFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDAL 189
Query: 401 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX--XXXXXXGSMITRGLPP 458
CR G + A +L + + +I D + LL+ +CK + P
Sbjct: 190 CRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSP 249
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
+ V+ + G ++ + + N M +P+L Y + G+ +A D K
Sbjct: 250 GLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGV--IADEDYPK--- 304
Query: 519 DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
KL D E+ LGL+ + TYN IN LCK
Sbjct: 305 ----ADKLFD-------------------------ELLLLGLAPDVYTYNVYINGLCKQN 335
Query: 579 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 638
E A ++M M G P+ +TY LI K L M GV + T+D
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFD 395
Query: 639 AIVTPFL 645
+++ ++
Sbjct: 396 IMISAYI 402
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 80/139 (57%)
Query: 280 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 339
S++P +++YNS+I+GFCK+ + A+ +L M G P V T++TLI+GY + ++
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 340 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 399
+ + EM RG+ N V Y ++++ + GD++ A +L++MI + PD ++ + G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 400 LCRNGYLTEALKLHNQILK 418
LC L +A + + K
Sbjct: 125 LCSKKELRKAFAILEDLQK 143
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 551
P YNS I+G CK D AK ++D + + D TF+TLI+GY + ++D +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 552 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 611
EM G+ AN VTY TLI+ C+ G + A++L+ MI G+ PD IT+ ++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 612 KHHPEEVIAL 621
K + A+
Sbjct: 128 KKELRKAFAI 137
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
ML+ FP +++N +IDG CK +D A +++ + M P+ V+++++ING+CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML---DSMASKGCSPDVVTFSTLINGYCK 57
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
+ E+ +M + G + TY TLI G+ + G L+ + L +EM+ G+ P+ +
Sbjct: 58 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 117
Query: 358 YNSILYWLYRHGDMEEASKVLSDM 381
++ +L L ++ +A +L D+
Sbjct: 118 FHCMLAGLCSKKELRKAFAILEDL 141
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 214 TFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM 273
T+N I CK+ RV +A ++ M G P+VV+F+ +I+G CK +D +++ +M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 274 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 333
+ + N+V+Y ++I+GFC+ G L A+++L +M+ G P T+ ++ G
Sbjct: 72 HR---RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 334 GSLEESLRLCDEM 346
L ++ + +++
Sbjct: 129 KELRKAFAILEDL 141
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 180 WNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML 239
+N+ + + + +D R+ M S G +V TF+ I CK RV + + M
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 240 KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
+ G N V++ +I G C+ G LD A + +N M V P+ ++++ ++ G C K
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDL---LNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 300 GLLLAEEVLGDMVKA 314
L A +L D+ K+
Sbjct: 130 ELRKAFAILEDLQKS 144
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 475
+L++ + + N +++ CK SM ++G PDV T +T+I+G CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 476 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNT 534
+ + ++ M + N Y + I+G C++ D A++L++E+ + D TF+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 535 LISGYSNSGQIDEAFGLTTEMK 556
+++G + ++ +AF + +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 531 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
T+N++I G+ ++D+A + M S G S + VT++TLIN CK + E+ M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 591 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
+GI + +TYTTLI F + + L + MI GV PD T+
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 118
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 65/126 (51%)
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
M++ P+ TY ++IDG+ + ++++ R+ D M +G P++V +++++ +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
++ ++ +M + I + +Y L G C+ G L A L N+++ + D + +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 431 LLNYIC 436
+L +C
Sbjct: 121 MLAGLC 126
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 63/140 (45%)
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
I P +Y + +G C+ + +A ++ + + D + + L+N CK+
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 505
M RG+ + T T+I G C++G+ + A L N MI P+ ++ + GL
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 506 CKMASTDVAKNLVDELRKRK 525
C A ++++L+K +
Sbjct: 126 CSKKELRKAFAILEDLQKSE 145
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 197/449 (43%), Gaps = 63/449 (14%)
Query: 166 CELRTRGCL-VSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCK 224
C + GCL + + WN+ + +E+ + +++ M +V++FN+ I K
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPH----PDVSSFNVMIVGYAK 209
Query: 225 ECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPN 284
+ +EA+ + ++M+ DG P+ + ++ + L V + G N
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIE-RRGPVYSSN 268
Query: 285 SVSYNSIINGF--CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 342
+ N++++ + CK+ GL A+ M K +R++ T++ G+ R G +E + +
Sbjct: 269 LILSNALLDMYFKCKESGL--AKRAFDAMKKK----DMRSWNTMVVGFVRLGDMEAAQAV 322
Query: 343 CDEMVERGLFPNIVVYNSILYWLYRHG-DMEEASKVLSDM-IDKHICPDQYSYAILTEGL 400
D+M +R ++V +NS+L+ + G D ++ +M I + + PD+ + L G
Sbjct: 323 FDQMPKR----DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGA 378
Query: 401 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 460
NG L+ +H +++ L DAF
Sbjct: 379 ANNGELSHGRWVHGLVIRLQLKGDAF---------------------------------- 404
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 520
+ +ID CK G E+A ++ K + ++ ++ S I GL + A L
Sbjct: 405 -LSSALIDMYCKCGIIERAFMVF----KTATEKDVALWTSMITGLAFHGNGQQALQLFGR 459
Query: 521 LRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK-SLGLSANRVTYNTLINLLCKNG 578
+++ + + T +++ S+SG ++E + MK G Y +L++LLC+ G
Sbjct: 460 MQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAG 519
Query: 579 CDEEAKELMKMMIMQGIRPDCITYTTLIT 607
EEAK++++ + +RP + ++++
Sbjct: 520 RVEEAKDIVQKKM--PMRPSQSMWGSILS 546
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 156/397 (39%), Gaps = 54/397 (13%)
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 342
PN YN++I+ + M++ P +T+ L+ + +++
Sbjct: 98 PNVFVYNTMISAVSSSKNECFG--LYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIH-- 153
Query: 343 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 402
C +V L ++NS++ + G+ A KV + M PD S+ ++ G +
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPH----PDVSSFNVMIVGYAK 209
Query: 403 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP---PD 459
G+ EALKL+ +++ + D +++ LL C I R P +
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLL-VCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 460 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 519
+ ++D K + A R ++ M K D + +N+ + G ++ + A+ + D
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKD----MRSWNTMVVGFVRLGDMEAAQAVFD 324
Query: 520 ELRKRKLL----------------------------------DATTFNTLISGYSNSGQI 545
++ KR L+ D T +LISG +N+G++
Sbjct: 325 QMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGEL 384
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
+ + L L + + LI++ CK G E A M+ D +T++
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERA----FMVFKTATEKDVALWTSM 440
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
IT + ++ + L M +GV P+ T A++T
Sbjct: 441 ITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLT 477
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 21/261 (8%)
Query: 152 CTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVEN 211
C + G + A+D + + R +WN + V + D++ ++ M +
Sbjct: 282 CKESGLAKRAFDAMKKKDMR-------SWNTMVVGFVRLGDMEAAQAVFDQMPK----RD 330
Query: 212 VNTFNLAIYALCKE-CRVVEAITVIYRM-LKDGTFPNVVSFNMIIDGACKTGSLDLALKV 269
+ ++N ++ K+ C + Y M + + P+ V+ +I GA G L V
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
L+ + ++ +++I+ +CK G + A V K E V + ++I G
Sbjct: 391 H---GLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF----KTATEKDVALWTSMITG 443
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH-ICP 388
A G+ +++L+L M E G+ PN V ++L G +EE V + M DK P
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 389 DQYSYAILTEGLCRNGYLTEA 409
+ Y L + LCR G + EA
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEA 524
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 143/323 (44%), Gaps = 17/323 (5%)
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
N +I F K G A +V + GF P+ +TY ++ + ++ + +C++M++
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKV--LSDMIDKHICPDQYSYAILTEGLCRN-GY 405
G+ +I+ W + G EEA V L+ +K + P A L LC+N G
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPP--RFVATLITALCKNDGT 352
Query: 406 LTEALKLHNQILKFDLIEDAFSLNI-----LLNYICKSXXXXXXXXXXGSMITRGLPPDV 460
+T A Q + DL +A I +++ +C+ MI++G P
Sbjct: 353 ITFA-----QEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGN 407
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 520
V+ K G+ ++A + M +P++ Y I+G K D A+ ++ E
Sbjct: 408 AVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAE 467
Query: 521 LRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 579
+K+ K L T++ LI GY + DEA L EM G+ N YN LI C
Sbjct: 468 AKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKAL 527
Query: 580 D-EEAKELMKMMIMQGIRPDCIT 601
D E+A+ L + M +G+ + I+
Sbjct: 528 DWEKAEVLFEEMKQKGLHLNAIS 550
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 147/370 (39%), Gaps = 77/370 (20%)
Query: 196 FWRLYKGMGSFGH--VENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMI 253
W L K +G V N+ N I K + A V + + G PN ++ +
Sbjct: 213 LWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLT 272
Query: 254 IDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG------------- 300
++ CK +D A V +KM L +G V +II FCK+G
Sbjct: 273 LEALCKRSFMDWACSVCEKM-LKSG--VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKT 329
Query: 301 -----------------------LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
+ A+E+LGD+ ++ ++ +I R +++
Sbjct: 330 KEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVK 389
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
++ L +M+ +G P V+N +++ + GD++EA +VL M + + PD Y+Y ++
Sbjct: 390 DAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVII 449
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 457
G + G + EA ++ + K + L
Sbjct: 450 SGYAKGGMMDEAQEILAEAKKKH---------------------------------KKLS 476
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC-KMASTDVAKN 516
P Y +I G CK+ ++AL+L N M + QPN YN I C K + A+
Sbjct: 477 PVTYH--ALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEV 534
Query: 517 LVDELRKRKL 526
L +E++++ L
Sbjct: 535 LFEEMKQKGL 544
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 130/315 (41%), Gaps = 41/315 (13%)
Query: 160 GAYDVICEL-RTRGC-LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
G +D++ E+ C ++++ N ++ ++ + ++ FG N T+ L
Sbjct: 212 GLWDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYL 271
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
+ ALCK + A +V +MLK G II CK G + A V + +
Sbjct: 272 TLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYE-LAKTK 330
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLL-LAEEVLGD-------------------------- 310
S+ P V+ ++I CK G + A+E+LGD
Sbjct: 331 EKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNV 388
Query: 311 ---------MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 361
M+ G P + ++ ++ G L+E+ + M RGL P++ Y I
Sbjct: 389 KDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVI 448
Query: 362 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
+ + G M+EA ++L++ KH +Y L G C+ EALKL N++ +F +
Sbjct: 449 ISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGV 508
Query: 422 IEDAFSLNILLNYIC 436
+A N L+ C
Sbjct: 509 QPNADEYNKLIQSFC 523
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 138/324 (42%), Gaps = 11/324 (3%)
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
+D Y W ++E E G+ N+ + N ++ + G + A V S +
Sbjct: 208 MDAYGLWDLVKE----IGEKESCGVL-NLEILNELIALFGKLGKSKAAFDVFSKTEEFGF 262
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 446
P+ +Y + E LC+ ++ A + ++LK ++ + + ++ + CK
Sbjct: 263 TPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYS 322
Query: 447 --XXGSMITRGLPPDVYTKATVIDGNCK-LGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
+ LPP AT+I CK G A + + + + ++ I+
Sbjct: 323 VYELAKTKEKSLPPRFV--ATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIH 380
Query: 504 GLCKMASTDVAKN-LVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
LC+M + AK L+D + K FN ++ S +G +DEA + M+S GL
Sbjct: 381 SLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKP 440
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
+ TY +I+ K G +EA+E++ + + +TY LI + K +E + L
Sbjct: 441 DVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLL 500
Query: 623 DYMILKGVIPDQKTYDAIVTPFLL 646
+ M GV P+ Y+ ++ F L
Sbjct: 501 NEMDRFGVQPNADEYNKLIQSFCL 524
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 3/172 (1%)
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
E+L L E+ + F ++ + ++ + A ++ ++ ++G +N +
Sbjct: 358 EMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHAC 417
Query: 188 VEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNV 247
+ D+D + K M S G +V T+ + I K + EA ++ K +
Sbjct: 418 SKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP 477
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 299
V+++ +I G CK D ALK++ +M+ V PN+ YN +I FC K
Sbjct: 478 VTYHALIRGYCKIEEYDEALKLLNEMDRF---GVQPNADEYNKLIQSFCLKA 526
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 186/441 (42%), Gaps = 53/441 (12%)
Query: 209 VENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALK 268
+++ +T A+ L +C ++++ +++ ++V++ +I G CK G ALK
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE---KDMVAWGSLISGLCKNGKFKEALK 460
Query: 269 VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 328
V M +S+ P+S S+ N L +V G M+K G +V ++LID
Sbjct: 461 VFGDMK-DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLID 519
Query: 329 GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 388
Y++ G E +L++ M N+V +NS++ R+ E + + + M+ + I P
Sbjct: 520 LYSKCGLPEMALKVFTSMSTE----NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFP 575
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 448
D S + + L + LH L+
Sbjct: 576 DSVSITSVLVAISSTASLLKGKSLHGYTLRL----------------------------- 606
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 508
G+P D + K +ID K G ++ A ++ M + +L +N I G
Sbjct: 607 ------GIPSDTHLKNALIDMYVKCGFSKYAENIFKKM----QHKSLITWNLMIYGYGSH 656
Query: 509 ASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS-LGLSANRVT 566
A +L DE++K + D TF +LIS ++SG ++E + MK G+ N
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 626
Y +++LL + G EEA +K M I D + L++ ++ HH E+ L +
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAM---PIEADSSIWLCLLSA-SRTHHNVELGILSAEKL 772
Query: 627 LKGVIPDQKTYDAIVTPFLLA 647
L+ TY ++ ++ A
Sbjct: 773 LRMEPERGSTYVQLINLYMEA 793
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 171/407 (42%), Gaps = 26/407 (6%)
Query: 246 NVVSFNMIIDGACKTG----SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 301
NVV +N++I G +G SLDL + L NSV S S+ + +
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYM-------LAKNNSVKLVSTSFTGALGACSQSENS 288
Query: 302 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 361
++ D+VK G +L+ Y++ G + E+ + +V++ L ++N++
Sbjct: 289 GFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL----EIWNAM 344
Query: 362 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
+ + A + M K + PD ++ + + G +H ++ K +
Sbjct: 345 VAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPI 404
Query: 422 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 481
+ + LL K SM + D+ ++I G CK G ++AL+
Sbjct: 405 QSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK----DMVAWGSLISGLCKNGKFKEALK 460
Query: 482 LYNGMIKMDE--QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISG 538
++ M D+ +P+ I S N + + + + K L L+ ++LI
Sbjct: 461 VFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDL 520
Query: 539 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 598
YS G + A + T M + N V +N++I+ +N E + +L +M+ QGI PD
Sbjct: 521 YSKCGLPEMALKVFTSMS----TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPD 576
Query: 599 CITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
++ T+++ + + +LH Y + G+ D +A++ ++
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYV 623
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 158/389 (40%), Gaps = 43/389 (11%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
+N+++ + + A ++ G M + P T + +I + G + E+
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF 400
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+R + + +++L + G +A V M +K D ++ L GLC+NG
Sbjct: 401 KRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK----DMVAWGSLISGLCKNGKFK 456
Query: 408 EALKLHNQILKFD--LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
EALK+ + D L D+ + + N GSMI GL +V+ ++
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
+ID K G E AL+++ M N+ +NS I+ + +++ +L + + +
Sbjct: 517 LIDLYSKCGLPEMALKVFTSM----STENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG 572
Query: 526 LL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
+ D+ + +++ S++ + + L LG+ ++ N LI++ K G + A+
Sbjct: 573 IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAE 632
Query: 585 ELMKMMIMQ-------------------------------GIRPDCITYTTLITHFNKKH 613
+ K M + G PD +T+ +LI+ N
Sbjct: 633 NIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSG 692
Query: 614 HPEEVIALHDYMILK-GVIPDQKTYDAIV 641
EE + ++M G+ P+ + Y +V
Sbjct: 693 FVEEGKNIFEFMKQDYGIEPNMEHYANMV 721
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 110/250 (44%), Gaps = 10/250 (4%)
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK--SXXXXXXXXXXGSMIT 453
+ +G + E + ++L F + DAFSL+I+++ +CK + G M+
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 454 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 513
L D + K +ID K G + A R++ ++++++ N+ ++N I G +
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVF---VEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 514 AKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
+ +L + + L +T+F + S S + ++ +GL + +L++
Sbjct: 256 SLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLS 315
Query: 573 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
+ K G EA+ + ++ + + + ++ + + + + L +M K V+P
Sbjct: 316 MYSKCGMVGEAETVFSCVVDKRLE----IWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371
Query: 633 DQKTYDAIVT 642
D T +++
Sbjct: 372 DSFTLSNVIS 381
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 153/337 (45%), Gaps = 60/337 (17%)
Query: 86 MLFPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAV- 144
ML P L SC+ S M +LI ELL+ +++ S +
Sbjct: 24 MLVPADLSWSCSF--------------SGMHSLINTGEEDEEELLKKIVNHSESGSKIIS 69
Query: 145 ---FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYK 201
+ LV T+ G GAYD++ L+ + + + + N L+ E+ND+ R+++
Sbjct: 70 KIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFR 129
Query: 202 GMGSFGHVENVNT---FNLA----------------------------------IYALCK 224
+ E +++ NLA I+A
Sbjct: 130 EVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFA- 188
Query: 225 ECRVVEAITVIYRMLKD-GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP 283
E R ++ + +I + +K+ P+V+++N ++D + G ++ L V+ M SV
Sbjct: 189 ETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMK--EDCSVSV 246
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
N ++YN+++NG K + + +MV+ G EP + +Y +ID R G+++ESLRL
Sbjct: 247 NIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLF 306
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
DEM +R + P++ VY +++ L + GD + A + LSD
Sbjct: 307 DEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQ-LSD 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 10/272 (3%)
Query: 260 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP- 318
+G+ DL L+ +++ N+ SV+ N ++ +N K + EVL + G EP
Sbjct: 87 SGAYDL-LQSLQEKNICLPISVFKNLLAAAGELNDM--KLSCRVFREVL---ILPGKEPL 140
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
S Y L + L E+ E L ++V N I++ +++ +L
Sbjct: 141 SSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMIL 200
Query: 379 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD--LIEDAFSLNILLNYIC 436
+M + PD +Y + + L R G + E L + + +K D + + + N +LN +
Sbjct: 201 KEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLST-MKEDCSVSVNIITYNTVLNGMR 259
Query: 437 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 496
K+ M+ G+ PD+ + VID + GN +++LRL++ M + +P++
Sbjct: 260 KACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVY 319
Query: 497 IYNSFINGLCKMASTDVAKNLVDELRKRKLLD 528
+Y + I+ L K A L DEL+ LD
Sbjct: 320 VYRALIDCLKKSGDFQSALQLSDELKNTSSLD 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKS-LGLSANRVTYNTLINLLCKNGCDEEAKEL 586
D T+N+++ +G ++E G+ + MK +S N +TYNT++N + K + +
Sbjct: 211 DVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVI 270
Query: 587 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
M+ GI PD ++YT +I + + +E + L D M + + P Y A++
Sbjct: 271 YNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALI 325
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 160/370 (43%), Gaps = 44/370 (11%)
Query: 201 KGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKT 260
KGM G ++ +A+ + + V AI + G + SFN ++ C+
Sbjct: 175 KGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCER 234
Query: 261 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 320
+ A V N GN + +S SYN +I+G+ K G + E+VL +MV++GF P
Sbjct: 235 SHVSAAKSVF---NAKKGN-IPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDC 290
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
+Y+ LI+G R G + +S+ + D + +G P+ VYN+++ D +E+ +
Sbjct: 291 LSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRR 350
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI------------------ 422
M+D+ P+ +Y+ L GL + +++AL++ ++L ++
Sbjct: 351 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGP 410
Query: 423 -------------------EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
E A+ L LL + + M G P DV
Sbjct: 411 PHAAMVIYQKSRKAGCRISESAYKL--LLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVY 468
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
++DG C +G+ E A+ + ++ PN +Y+ + L T++A L +++K
Sbjct: 469 EYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKK 528
Query: 524 -RKLLDATTF 532
R +A +F
Sbjct: 529 ARATENARSF 538
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 3/284 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
++ ++ +++G E V+ E+ G ++++ + L I+ ++ +
Sbjct: 258 YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIK 317
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G+V + N +N I E++ RML + PN+ +++ ++ G K +
Sbjct: 318 HKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVS 377
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
AL++ ++M V P + S + C G A + KAG S Y
Sbjct: 378 DALEIFEEM---LSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYK 434
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
L+ +R+G L + DEM E G ++ VY I+ L G +E A V+ + + K
Sbjct: 435 LLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRK 494
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
CP+++ Y+ L+ L + A KL +I K E+A S
Sbjct: 495 GFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 102/225 (45%)
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 480
+ +D S +++L + + M+ G+ PD+ +D ++ +A+
Sbjct: 147 VTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAI 206
Query: 481 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYS 540
L+ + + +N+ + LC+ + AK++ + + D+ ++N +ISG+S
Sbjct: 207 ELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWS 266
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 600
G+++E + EM G + ++Y+ LI L + G ++ E+ + +G PD
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 601 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
Y +I +F +E + + M+ + P+ +TY +V+ +
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLI 371
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 6/265 (2%)
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
E G+ ++ Y+ IL L R VL M+ + + PD I + R Y+
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
A++L + F + S N LL +C+ + +P D + +I
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK-KGNIPFDSCSYNIMI 262
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKL 526
G KLG E+ ++ M++ P+ Y+ I GL + + + + D ++ K +
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 527 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
DA +N +I + ++ DE+ M N TY+ L++ L K +A E+
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 587 MKMMIMQGIRPDCITYTTLITHFNK 611
+ M+ +G+ P T L+T F K
Sbjct: 383 FEEMLSRGVLPT----TGLVTSFLK 403
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 136/362 (37%), Gaps = 49/362 (13%)
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
SY+ I+ ++ +VL MV G P + +D + R + ++ L +E
Sbjct: 153 SYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEES 212
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
G+ + +N++L L + A V + +I D SY I+ G + G +
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
E K+ + M+ G PD + + +
Sbjct: 272 EEMEKVLKE-----------------------------------MVESGFGPDCLSYSHL 296
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK-RK 525
I+G + G ++ +++ + P+ +YN+ I C S A++ + +R R+
Sbjct: 297 IEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMI---CNFIS---ARDFDESMRYYRR 350
Query: 526 LLDAT------TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 579
+LD T++ L+SG ++ +A + EM S G+ + + LC G
Sbjct: 351 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGP 410
Query: 580 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 639
A + + G R Y L+ ++ ++ + D M G D + Y+
Sbjct: 411 PHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEY 470
Query: 640 IV 641
IV
Sbjct: 471 IV 472
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 193 IDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNM 252
I+R + GM FG + +FN + L E + K G + N+
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 253 IIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 312
+I G C++G+L+ AL+++ + PN ++++ +I GFC KG A ++L M
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSR---PNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
K EP T+ LI G + G +EE + L + M +G PN Y +LY L
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
EA +++S MI + P SY + GLC + E
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVE 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 133/324 (41%), Gaps = 40/324 (12%)
Query: 313 KAGFEPSVRTYATLIDGYAR---WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
+ ++P+ YA +I+ + + + +EE +R ++ +R F YN + + G
Sbjct: 88 RKDYQPTESLYALMINKFGQAKMYDEIEEVMRTI-KLEKRCRFSEEFFYNLMRIYGNLAG 146
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
+ A ++L M D P S+ + L E K+ K + DA LN
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
IL+ +C+S GN E AL+L + +
Sbjct: 207 ILIKGLCES-----------------------------------GNLEAALQLLDEFPQQ 231
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA 548
+PN+ ++ I G C + A L++ + K ++ D TFN LISG G+++E
Sbjct: 232 KSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEG 291
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
L MK G N TY ++ L + EAKE+M MI G+RP ++Y ++
Sbjct: 292 IDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLG 351
Query: 609 FNKKHHPEEVIALHDYMILKGVIP 632
+ E+ + M+ G +P
Sbjct: 352 LCETKSVVEMDWVLRQMVNHGFVP 375
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 107/234 (45%), Gaps = 3/234 (1%)
Query: 155 VGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNT 214
G A +++ + GC S ++N L+ LV D +++ G +
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 215 FNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
N+ I LC+ + A+ ++ + + PNV++F+ +I G C G + A K++++M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
+ P+++++N +I+G KKG + ++L M G EP+ TY ++ G
Sbjct: 265 ---KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKK 321
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 388
E+ + +M+ G+ P+ + Y ++ L + E VL M++ P
Sbjct: 322 RNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 3/232 (1%)
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
R+ AI +++ M G +P+ SFN I++ D K+ + V ++
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL---GVEIDAC 203
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
N +I G C+ G L A ++L + + P+V T++ LI G+ G EE+ +L + M
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
+ + P+ + +N ++ L + G +EE +L M K P+ +Y + GL
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
EA ++ +Q++ + + S ++ +C++ M+ G P
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK-----RKL-- 526
G +A+ + GM P+ +N +N L V+ L DE+ K KL
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLL-------VSAKLFDEIHKIFVSAPKLGV 198
Query: 527 -LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
+DA N LI G SG ++ A L E N +T++ LI C G EEA +
Sbjct: 199 EIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFK 258
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
L++ M + I PD IT+ LI+ KK EE I L + M +KG P+ TY ++ L
Sbjct: 259 LLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL 318
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 499 NSFINGLCKMASTDVAKNLVDELRKRK-LLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
N I GLC+ + + A L+DE ++K + TF+ LI G+ N G+ +EAF L M+
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
+ + +T+N LI+ L K G EE +L++ M ++G P+ TY ++ K E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 618 VIALHDYMILKGVIPDQKTYDAIV 641
+ MI G+ P +Y +V
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMV 349
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 105/283 (37%), Gaps = 38/283 (13%)
Query: 229 VEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY 288
+E + ++ K F +N++ G ++ A++++ M WP+S S+
Sbjct: 114 IEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGM---PDFGCWPSSKSF 170
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
N I+N ++ K G E LI G G+LE +L+L DE
Sbjct: 171 NFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDE--- 227
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
FP ++ S+ P+ +++ L G C G E
Sbjct: 228 ---FP------------------QQKSR-----------PNVMTFSPLIRGFCNKGKFEE 255
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A KL ++ K + D + NIL++ + K M +G P+ T V+
Sbjct: 256 AFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLY 315
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 511
G +A + + MI +P+ Y + GLC+ S
Sbjct: 316 GLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 10/258 (3%)
Query: 176 SVHAWNNFLSHLVEVNDIDRFWRLYKGMGS-FGHVENVNTFNLAIYALCKECRVVEAITV 234
+V + N L + D R+Y M +G ++ T+N I C+ + ++
Sbjct: 150 TVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSI 209
Query: 235 IYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIING 294
+ M + G PN SF ++I G D +V K + +M V +YN I
Sbjct: 210 VAEMERKGIKPNSSSFGLMISGFYAEDKSD---EVGKVLAMMKDRGVNIGVSTYNIRIQS 266
Query: 295 FCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN 354
CK+ A+ +L M+ AG +P+ TY+ LI G+ EE+ +L MV RG P+
Sbjct: 267 LCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPD 326
Query: 355 IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN 414
Y +++Y+L + GD E A + + ++K+ P L GL ++ + EA +L
Sbjct: 327 SECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIG 386
Query: 415 QILKFDLIEDAFSLNILL 432
Q +++ F+ N+ L
Sbjct: 387 Q------VKEKFTRNVEL 398
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Query: 477 EKALRLYNGMIKM-DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNT 534
++A R+Y M KM +P+L YN I C+ S + ++V E+ ++ + ++++F
Sbjct: 168 KEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227
Query: 535 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 594
+ISG+ + DE + MK G++ TYN I LCK +EAK L+ M+ G
Sbjct: 228 MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG 287
Query: 595 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 637
++P+ +TY+ LI F + EE L M+ +G PD + Y
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECY 330
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 37/259 (14%)
Query: 266 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 325
A +V +M M G + P+ +YN +I FC+ G + ++ +M + G +P+ ++
Sbjct: 170 AKRVYIEMPKMYG--IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
+I G+ +E ++ M +RG+ + YN + L + +EA +L M+
Sbjct: 228 MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG 287
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
+ P+ +Y+ L G C EA KL F +
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKL-------------FKI----------------- 317
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 505
M+ RG PD T+I CK G+ E AL L ++ + P+ +I S +NGL
Sbjct: 318 -----MVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 372
Query: 506 CKMASTDVAKNLVDELRKR 524
K + + AK L+ +++++
Sbjct: 373 AKDSKVEEAKELIGQVKEK 391
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 4/198 (2%)
Query: 164 VICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALC 223
++ E+ +G + ++ +S + D ++ M G V+T+N+ I +LC
Sbjct: 209 IVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLC 268
Query: 224 KECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP 283
K + EA ++ ML G PN V+++ +I G C + A K+ K +M P
Sbjct: 269 KRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFK---IMVNRGCKP 325
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
+S Y ++I CK G A + + ++ + PS +L++G A+ +EE+ L
Sbjct: 326 DSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Query: 344 DEMVERGLFPNIVVYNSI 361
++ E+ N+ ++N +
Sbjct: 386 GQVKEK-FTRNVELWNEV 402
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR--GLPPDVYTK 463
L +L++ + KF++ SLN LL + C + + G+ PD+ T
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALL-FACLVAKDYKEAKRVYIEMPKMYGIEPDLETY 190
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
+I C+ G+ + + M + +PN + + I+G +D ++ ++
Sbjct: 191 NRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKD 250
Query: 524 RKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 582
R + + +T+N I + EA L M S G+ N VTY+ LI+ C EE
Sbjct: 251 RGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEE 310
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
AK+L K+M+ +G +PD Y TLI + K E ++L + K +P
Sbjct: 311 AKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 2/271 (0%)
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
S R A I YA+ L+ SLR+ ++ + + + N++L+ D +EA +V
Sbjct: 115 SERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVY 174
Query: 379 SDMIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
+M + I PD +Y + + C +G + + + ++ + + ++ S ++++
Sbjct: 175 IEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYA 234
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
M RG+ V T I CK +++A L +GM+ +PN
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 556
Y+ I+G C + AK L + R D+ + TLI G + A L E
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
+ +L+N L K+ EEAKEL+
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 187/453 (41%), Gaps = 23/453 (5%)
Query: 182 NFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKD 241
N + L+ +D+D +L + V T N I A+ + R E+I++ K
Sbjct: 150 NRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQ 209
Query: 242 GTF-PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG 300
PNVVS+N II+ C G++D AL+V + +++ P+SV+Y + G + G
Sbjct: 210 SNIVPNVVSYNQIINAHCDEGNVDEALEVYR--HILANAPFAPSSVTYRHLTKGLVQAGR 267
Query: 301 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYN 359
+ A +L +M+ G Y LI GY G ++++ DE+ + ++ IV
Sbjct: 268 IGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNAT 327
Query: 360 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 419
+ YW + G+ +EA + ++DK + +L E + G EA L N++L
Sbjct: 328 FMEYW-FEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDN 386
Query: 420 DLIEDAFSLN-----ILLNYICK----SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 470
+ S+N I++N K S + ++ D ++
Sbjct: 387 HAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRF 446
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE-----LRKRK 525
C+ G +A R + + + + + I+ K D A ++D LR
Sbjct: 447 CEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVA 506
Query: 526 LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
A F LI +G++ E+ + T+M + Y+ ++ LC ++AK+
Sbjct: 507 DFGARVFGELIK----NGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKD 562
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 618
++ MI + + +I F K EE+
Sbjct: 563 IVGEMIRHNVGVTTVLREFIIEVFEKAGRREEI 595
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKN 516
P+V + +I+ +C GN ++AL +Y ++ P+ Y GL + A +
Sbjct: 214 PNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAAS 273
Query: 517 LVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
L+ E L K + D+T +N LI GY + G D+A E+KS + + T +
Sbjct: 274 LLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWF 333
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
+ G D+EA E + ++ + R T L+ F K +E AL + M+ P+
Sbjct: 334 EKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPN 391
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/409 (18%), Positives = 159/409 (38%), Gaps = 68/409 (16%)
Query: 110 EALSLMRNLIAKEGIAP---------------------LELLEALMDESYQHCPAVFDAL 148
EAL + R+++A AP LL ++ + V++ L
Sbjct: 234 EALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNL 293
Query: 149 VRACTQVGATEGAYDVICELRTRGCLVS---VHAWNNFLSHLVEVNDIDRFWRLYKGMGS 205
+R +G + A + EL+++ C V V+A F+ + E + Y+ +
Sbjct: 294 IRGYLDLGDFDKAVEFFDELKSK-CTVYDGIVNA--TFMEYWFEKGNDKEAMESYRSLLD 350
Query: 206 FGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFN-----MIIDGACKT 260
+ T N+ + K + EA + ML + PN++S N ++++ K
Sbjct: 351 KKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKM 410
Query: 261 GSLDLALKVMKKM-NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 319
G A+ KK+ + +T + + Y +I+ FC++G L AE + V
Sbjct: 411 GEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPAD 470
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
++ +ID Y + +++++++ D MV+ L +V++
Sbjct: 471 APSHRAMIDAYLKAERIDDAVKMLDRMVDVNL------------------------RVVA 506
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
D + + E L +NG LTE+ ++ ++ + + D ++++ +C
Sbjct: 507 D----------FGARVFGE-LIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGD 555
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
G MI + + +I+ K G E+ ++ N + +
Sbjct: 556 ALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNSVAR 604
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 147/341 (43%), Gaps = 15/341 (4%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV-ERGLFPNIVVYNSILYWLYRHGDM 371
++GF + T+ +ID ++ E S L + M+ PN V + I++ Y +
Sbjct: 74 ESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFR-IVFKRYVTAHL 132
Query: 372 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL--- 428
+ + D +D D+ S+ L + LC + ++ EA +L ++I + FS+
Sbjct: 133 VQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEEL---CFGKNVIGNGFSVSNT 189
Query: 429 ---NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
N++L K M T G+ D+++ + +D CK G KA++LY
Sbjct: 190 KIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKE 249
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQ 544
M + ++ YN+ I + + + E+R+R + T NT+I G+
Sbjct: 250 MKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR 309
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
+ +A+ + EM G + +TY L + L K E L MI G+RP TY
Sbjct: 310 MRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTYVM 366
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
L+ F + + V+ + M G PD Y+A++ +
Sbjct: 367 LMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALI 407
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 163/397 (41%), Gaps = 32/397 (8%)
Query: 70 FHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPL 127
+ N AL+F+NWV F H+ + ++ +L F + +L+ +I P
Sbjct: 57 YSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPN 116
Query: 128 ELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHL 187
+ ++ + Y V +A+ AYD + + R ++ N + L
Sbjct: 117 HVTFRIVFKRYVTAHLVQEAI-----------DAYDKLDDFNLR----DETSFYNLVDAL 161
Query: 188 VEVNDIDRFWRLYKGMGSFGH---VENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF 244
E + L G G+ V N NL + K + +M +G
Sbjct: 162 CEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVT 221
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
++ S+++ +D CK+G A+K+ K+M + + V+YN++I G+
Sbjct: 222 KDLFSYSIYMDIMCKSGKPWKAVKLYKEMK---SRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
V +M + G EP+V T+ T+I G + ++ R+ DEM +RG P+ + Y +
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLF-- 336
Query: 365 LYRHGDMEEASKVLS---DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 421
+E+ S++LS MI + P +Y +L R G+L L + + +
Sbjct: 337 ----SRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGD 392
Query: 422 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
D+ + N +++ + + MI RGL P
Sbjct: 393 TPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 154/359 (42%), Gaps = 5/359 (1%)
Query: 169 RTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM-GSFGHVENVNTFNLAIYALCKECR 227
R G + +N + L + + + W L M G+ V N TF +
Sbjct: 73 RESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHL 132
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
V EAI Y L D + SF ++D C+ + A ++ N++ N+
Sbjct: 133 VQEAIDA-YDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKI 191
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
+N I+ G+ K G +E M G + +Y+ +D + G ++++L EM
Sbjct: 192 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMK 251
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
R + ++V YN+++ + +E +V +M ++ P+ ++ + + LC +G +
Sbjct: 252 SRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMR 311
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
+A ++ +++ K D+ + L + + K G MI G+ P + T ++
Sbjct: 312 DAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLF---GRMIRSGVRPKMDTYVMLM 368
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
+ G + L ++ M + + P+ YN+ I+ L + D+A+ +E+ +R L
Sbjct: 369 RKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 159/398 (39%), Gaps = 51/398 (12%)
Query: 207 GHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDG-TFPNVVSFNMIIDGACKTGSLDL 265
G TFN I L K + +I RM+ + + PN V+F ++ +
Sbjct: 76 GFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQE 135
Query: 266 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL--GDMVKAGFEPS-VRT 322
A+ K++ + S+ ++++ C+ ++ AEE+ +++ GF S +
Sbjct: 136 AIDAYDKLDDFNLR----DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKI 191
Query: 323 YATLIDGYAR---WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
+ ++ G+++ WG +E YW + D E +K
Sbjct: 192 HNLILRGWSKLGWWGKCKE------------------------YW--KKMDTEGVTK--- 222
Query: 380 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 439
D +SY+I + +C++G +A+KL+ ++ + D + N ++ I S
Sbjct: 223 ---------DLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQ 273
Query: 440 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 499
M RG P+V T T+I C+ G A R+ + M K QP+ Y
Sbjct: 274 GVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYM 333
Query: 500 SFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 559
+ L K +++ +R T+ L+ + G + + MK G
Sbjct: 334 CLFSRLEK--PSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 560 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 597
+ + YN +I+ L + G + A+E + MI +G+ P
Sbjct: 392 DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
++ ++RA E V E+R RGC +V N + L E + +R+ M
Sbjct: 261 AYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEM 320
Query: 204 GSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSL 263
G + T+ L K E +++ RM++ G P + ++ M++ + G L
Sbjct: 321 PKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFL 377
Query: 264 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 321
L V K M +G++ P+S +YN++I+ +KG L +A E +M++ G P R
Sbjct: 378 QPVLYVWKTMK-ESGDT--PDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRR 432
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 185/427 (43%), Gaps = 53/427 (12%)
Query: 217 LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSF-NMIIDGACKTGSLDLALKVMKKMNL 275
++++A C + R++ ++ + F F N ++D K G LD A V ++M
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM-- 357
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
+ SV VSY S+I G+ ++G A ++ +M + G P V T +++ AR+
Sbjct: 358 -SDRSV----VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
L+E R+ + + E L +I V N+++ + G M+EA V S+M K I S+
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI----ISWNT 468
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ G +N Y EAL L N +L+ E FS
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLE----EKRFS---------------------------- 496
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
PD T A V+ L +K ++ +++ + + NS ++ K + +A
Sbjct: 497 --PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 516 NLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
L D++ + L+ ++ +I+GY G EA L +M+ G+ A+ +++ +L+
Sbjct: 555 MLFDDIASKDLV---SWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
Query: 576 KNGCDEEAKELMKMMIMQ-GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
+G +E +M + I P Y ++ + ++I + ++ + PD
Sbjct: 612 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR---TGDLIKAYRFIENMPIPPDA 668
Query: 635 KTYDAIV 641
+ A++
Sbjct: 669 TIWGALL 675
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 170/414 (41%), Gaps = 32/414 (7%)
Query: 215 FNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
FN A +C V++IT R + D N + C++G+L+ A+K++
Sbjct: 39 FNRASLRTVSDC--VDSITTFDRSVTDA--------NTQLRRFCESGNLENAVKLL---- 84
Query: 275 LMTGN-SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 333
++G + P ++ S++ L +EV + GF + L Y
Sbjct: 85 CVSGKWDIDPRTLC--SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNC 142
Query: 334 GSLEESLRLCDEM-VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
G L+E+ R+ DE+ +E+ LF NI++ L + GD + + M+ + D Y+
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNE-----LAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
++ +++ + +LH ILK E N L+ + K+ M
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 512
R DV + ++I+G G EK L ++ M+ + +L S G
Sbjct: 258 ER----DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLIS 313
Query: 513 VAKNLVDELRKRKLLDATTF-NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 571
+ + + K F NTL+ YS G +D A + EM + V+Y ++I
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMI 369
Query: 572 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
+ G EA +L + M +GI PD T T ++ + +E +H+++
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 46/273 (16%)
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
G L EA ++ +++ IE A NIL+N + KS M++ G+ D YT
Sbjct: 143 GDLKEASRVFDEVK----IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
+ V L + +L+ ++K ++ NS + K D A+ + DE+ +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 524 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY---------------- 567
R D ++N++I+GY ++G ++ + +M G+ + T
Sbjct: 259 R---DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 568 -------------------NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
NTL+++ K G + AK + + M + + ++YT++I
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAG 371
Query: 609 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ ++ E + L + M +G+ PD T A++
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 173/414 (41%), Gaps = 22/414 (5%)
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSI 291
+ +I+R V+ + I C G L AL M + G Y+++
Sbjct: 5 MRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFH------GYDAL 58
Query: 292 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
+N K L + V M+K + P+ L+ Y + LE++ ++ DEM E+
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK-- 116
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
N+V + +++ + G EA V ++M+ P+++++A + R L +
Sbjct: 117 --NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 412 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 471
+H I+K++ F + LL+ K+ + R DV + +I G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER----DVVSCTAIIAGYA 230
Query: 472 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDAT 530
+LG E+AL +++ + PN Y S + L +A D K + +R+L A
Sbjct: 231 QLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 290
Query: 531 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
N+LI YS G + A L M +++N ++ K+G E EL ++M
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMP----ERTAISWNAMLVGYSKHGLGREVLELFRLM 346
Query: 591 IMQG-IRPDCITYTTLITHFNKKHHPEEVIALHDYMILK--GVIPDQKTYDAIV 641
+ ++PD +T +++ + + + + D M+ G P + Y IV
Sbjct: 347 RDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIV 400
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 144/349 (41%), Gaps = 50/349 (14%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
NVVS+ +I +TG AL V +M G PN ++ +++ + GL L +
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK---PNEFTFATVLTSCIRASGLGLGK 173
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
++ G +VK ++ + ++L+D YA+ G ++E+ + + + ER ++V +I+
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER----DVVSCTAIIAGY 229
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ G EEA ++ + + + P+ +YA L L L + H +L+
Sbjct: 230 AQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR------- 282
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
R LP + ++ID K GN A RL++
Sbjct: 283 ----------------------------RELPFYAVLQNSLIDMYSKCGNLSYARRLFD- 313
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR--KRKLLDATTFNTLISGYSNSG 543
M E+ ++ +N+ + G K L +R KR DA T ++SG S+
Sbjct: 314 --NMPERTAIS-WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370
Query: 544 QIDEAFGLTTEM--KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
D + M G Y ++++L + G +EA E +K M
Sbjct: 371 MEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRM 419
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 173/444 (38%), Gaps = 39/444 (8%)
Query: 210 ENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKV 269
+NV ++ I + EA+TV M++ PN +F ++ + L L ++
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI 175
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
L+ + + +S+++ + K G + A E+ + E V + +I G
Sbjct: 176 ---HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP----ERDVVSCTAIIAG 228
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
YA+ G EE+L + + G+ PN V Y S+L L ++ + ++ + +
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP-- 286
Query: 390 QYSYAILTEGL----CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
YA+L L + G L+ A +L + + + A S N +L K
Sbjct: 287 --FYAVLQNSLIDMYSKCGNLSYARRLFDNMPE----RTAISWNAMLVGYSKHGLGREVL 340
Query: 446 XXXGSMI-TRGLPPDVYTKATVIDGNCKLGNTEK-ALRLYNGMI--KMDEQPNLTIYNSF 501
M + + PD T V+ G C G E L +++GM+ + +P Y
Sbjct: 341 ELFRLMRDEKRVKPDAVTLLAVLSG-CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Query: 502 INGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
++ L + D A + + + A +L+ +D + + +
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSKP--TAGVLGSLLGACRVHLSVDIGESVGRRLIEIE-P 456
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD----CITYTTLITHF--NKKHHP 615
N Y L NL G + + MM+ + + + I + + +F N + HP
Sbjct: 457 ENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHP 516
Query: 616 --EEVIALHDYMILK----GVIPD 633
EEV+A + +K G +PD
Sbjct: 517 RREEVLAKMKEISIKMKQAGYVPD 540
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 160/360 (44%), Gaps = 7/360 (1%)
Query: 280 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 339
S P+ V Y ++ + + G + +AEE +M++ G EP T++ YARWG
Sbjct: 183 SYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAM 242
Query: 340 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 399
L + ER + + VYN +L L + + + +M+++ + P++++Y ++
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 400 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 459
+ G+ EALK ++ + + + + +++ K+ M ++G+ P
Sbjct: 303 YAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPS 362
Query: 460 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 519
YT AT++ K N KAL L+ M + + I I K+ A+++ +
Sbjct: 363 NYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFE 422
Query: 520 ELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
E + LL D T+ + + NSG + +A + MK+ + +R Y ++ K
Sbjct: 423 ETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQ 482
Query: 579 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 638
+ A+E + + G+ PD + ++ + + + E+ +K ++ DQ +D
Sbjct: 483 NVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGF-----IKQIMVDQVHFD 536
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 192/489 (39%), Gaps = 70/489 (14%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRM-----LKDGTFPNVVSFNMII-------DGAC 258
++ + A+ CKE V EA +I +M +KD F ++ +M I +
Sbjct: 536 DIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVL 595
Query: 259 KTGSLD-LALKVMKKMNLMTGN------------SVWPNSVSYNSIINGFCKKGGLLLAE 305
LD +AL +M + L GN S + N +I+ F ++G + AE
Sbjct: 596 NVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAE 655
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
+ +++ G T ATLI Y R L+E+ RL E P V S++
Sbjct: 656 MIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKT-PGKSVIRSMIDAY 714
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
R G +E+A + + +K P + +IL L G EA + L+ ++ D
Sbjct: 715 VRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDT 774
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT---------------KATVIDGN 470
N L+ + ++ M T G+P + T KA I N
Sbjct: 775 VGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSN 834
Query: 471 C--------------------KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
K G +AL L++ M K +P YN + K+ +
Sbjct: 835 ARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV----KICA 890
Query: 511 TDVAKNLVDEL-----RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 565
T + VDEL R + D +T+ TLI Y+ S Q EA T +K G+ +
Sbjct: 891 TSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHS 950
Query: 566 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
+++L++ L K G EEA+ M GI PD T++ + E+ I ++ M
Sbjct: 951 HFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010
Query: 626 ILKGVIPDQ 634
I V D+
Sbjct: 1011 IRSSVEDDR 1019
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 106/520 (20%), Positives = 209/520 (40%), Gaps = 43/520 (8%)
Query: 137 SYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRF 196
SY+ V+ ++R QVG + A + E+ GC A L
Sbjct: 183 SYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAM 242
Query: 197 WRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDG 256
YK + + + + +N + +L K+ + I + M+++G PN ++ +++
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 257 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 316
K G + ALK +M + P V+Y+S+I+ K G A + DM G
Sbjct: 303 YAKQGFKEEALKAFGEMKSL---GFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGI 359
Query: 317 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY-RHGDMEEAS 375
PS T AT++ Y + + ++L L +M ER P V ++ +Y + G +A
Sbjct: 360 VPSNYTCATMLSLYYKTENYPKALSLFADM-ERNKIPADEVIRGLIIRIYGKLGLFHDAQ 418
Query: 376 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
+ + ++ D+ +Y +++ +G + +AL + + D+ F+ ++L
Sbjct: 419 SMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCY 478
Query: 436 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 495
K ++ GL PD + +++ +L EKA ++ ++
Sbjct: 479 AKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDI 537
Query: 496 TIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYS------------NS 542
+Y + + CK A++L+ ++ R+ ++ D TL N
Sbjct: 538 ELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNV 597
Query: 543 GQID-EAFGLTTEMK-------------------SLGLSANRVTYNTLINLLCKNGCDEE 582
Q+D A GL ++ LG SA N +I+ + G +
Sbjct: 598 SQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSA----VNRVISSFVREGDVSK 653
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
A+ + ++I G+R + T TLI + ++H +E L+
Sbjct: 654 AEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY 693
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 161/401 (40%), Gaps = 35/401 (8%)
Query: 58 LTTFMVNRVVSEFH-----NSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEAL 112
L + VNRV+S F + + D +G+ + TL+ V EA
Sbjct: 633 LGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEE--ETIATLIAVYGRQHKLKEAK 690
Query: 113 SLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDA--LVRACTQVGATEGAYDV---ICE 167
L L A E P + + M ++Y C + DA L + G GA + +
Sbjct: 691 RLY--LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNA 748
Query: 168 LRTRG-----------CL-----VSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVEN 211
L RG CL + +N + ++E + +Y+ M + G +
Sbjct: 749 LTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCS 808
Query: 212 VNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMK 271
+ T+N I + ++ +AI + + G + + + +I K G + AL +
Sbjct: 809 IQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFS 868
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLL-LAEEVLGDMVKAGFEPSVRTYATLIDGY 330
+M + P + SYN ++ C L +E+L M + G + TY TLI Y
Sbjct: 869 EMQ---KKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVY 924
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
A E+ + + E+G+ + ++S+L L + G MEEA + M + I PD
Sbjct: 925 AESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDS 984
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
+ +G G + + + ++++ + +D F +++
Sbjct: 985 ACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVV 1025
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 109/254 (42%), Gaps = 3/254 (1%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
++ L++A + G + A ++ + T G S+ +N +S +D+ ++
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
G + + I K ++ EA+++ M K G P S+NM++ C T L
Sbjct: 837 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLH 895
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
+V + + M N + +Y ++I + + AE+ + + + G S ++
Sbjct: 896 H--EVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFS 953
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
+L+ + G +EE+ R +M E G+ P+ +IL GD E+ MI
Sbjct: 954 SLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRS 1013
Query: 385 HICPDQYSYAILTE 398
+ D++ +++ +
Sbjct: 1014 SVEDDRFVSSVVED 1027
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE-LRK 523
++ID + G E A L+ + P + +N L A+++ L K
Sbjct: 709 SMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK 768
Query: 524 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
LD +NTLI +G++ A + M + G+ + TYNT+I++ + ++A
Sbjct: 769 NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
E+ G+ D YT +I H+ K E ++L M KG+ P +Y+ +V
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 176/393 (44%), Gaps = 24/393 (6%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
N +N II G ++ ++A+ + M L + SV P ++Y S+ + + G
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDM-LCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
++ G ++K G E T++ Y G L E+ R+ M+ G ++V +NS++
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI--GF--DVVAWNSMIMGF 202
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
+ G +++A + +M + + S+ + G RNG +AL + ++ + D+ D
Sbjct: 203 AKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDG 258
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
F++ LLN ++ + +ID CK G E+ L ++
Sbjct: 259 FTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFEC 318
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQ 544
K L+ +NS I GL + A +L EL + L D+ +F +++ ++SG+
Sbjct: 319 APK----KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
Query: 545 I---DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
+ DE F L E + S Y ++N+L G EEA+ L+K M + D +
Sbjct: 375 VHRADEFFRLMKEKYMIEPSIKH--YTLMVNVLGGAGLLEEAEALIKNM---PVEEDTVI 429
Query: 602 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
+++L++ K + E +A LK + PD+
Sbjct: 430 WSSLLSACRKIGNVE--MAKRAAKCLKKLDPDE 460
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 134/307 (43%), Gaps = 21/307 (6%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+VV++N +I G K G +D A + +M G VS+NS+I+GF + G A
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNG-------VSWNSMISGFVRNGRFKDAL 243
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP-NIVVYNSILYW 364
++ +M + +P T +L++ A G+ E+ R E + R F N +V +++
Sbjct: 244 DMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG-RWIHEYIVRNRFELNSIVVTALIDM 302
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
+ G +EE V K + ++ IL GL NG+ A+ L +++ + L D
Sbjct: 303 YCKCGCIEEGLNVFECAPKKQL--SCWNSMIL--GLANNGFEERAMDLFSELERSGLEPD 358
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDV--YTKATVIDGNCKLGNTEKALR 481
+ S +L S M + + P + YT + G L +AL
Sbjct: 359 SVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEAL- 417
Query: 482 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSN 541
+ M + + I++S ++ K+ + ++AK L+K + + L + Y++
Sbjct: 418 ----IKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYAS 473
Query: 542 SGQIDEA 548
G +EA
Sbjct: 474 YGLFEEA 480
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/508 (20%), Positives = 195/508 (38%), Gaps = 100/508 (19%)
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
A+N L+ + D D++W+L++ M + +V T+N+ I + R + V+ R+
Sbjct: 238 AFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERI 297
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN------------------------ 274
+ G + + + ++ G L A ++++ M
Sbjct: 298 IDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKEKEEE 357
Query: 275 ------------LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV----LGDMVKAGFEP 318
+G S + VS +++ F K LL V ++ F P
Sbjct: 358 EAEDDEDAFEDDEDSGYSAR-DEVSEEGVVDVFKK----LLPNSVDPSGEPPLLPKVFAP 412
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMV---ERGLFPNIVVYNSILYWLYRHGDMEEAS 375
R Y TL+ GY + G + ++ R+ + M +R P+ V Y +++ G M+ A
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 376 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
+VL++M + ++ +Y +L +G C+ L+ D ED LL +
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQ-------------LQIDRAED------LLREM 513
Query: 436 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 495
+ G+ PDV + +IDG + ++ AL +N M P
Sbjct: 514 TEDA---------------GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTK 558
Query: 496 TIYNSFINGLCKMASTDVAKNLVDEL--RKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 553
Y + + +A + DE+ R +D +N L+ GY G I++A + +
Sbjct: 559 ISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVS 618
Query: 554 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 613
MK G N TY +L NG + K +++ + I+ C KK
Sbjct: 619 RMKENGFYPNVATYGSLA-----NGVSQARKPGDALLLWKEIKERCAV--------KKKE 665
Query: 614 HPEEVIALHDYMILKGVIPDQKTYDAIV 641
P + + +LK PD+ D +
Sbjct: 666 APSDSSSDPAPPMLK---PDEGLLDTLA 690
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 188/450 (41%), Gaps = 44/450 (9%)
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG------ 261
H + N+ L A K + + A++VI M++ G P+V ++ + +G
Sbjct: 149 HRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEE 208
Query: 262 SLDLALKVMKKMNLMTGNSV----WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
S+ L + + +++ S+ P++ ++N+++N G ++ +M + E
Sbjct: 209 SIKLFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCE 268
Query: 318 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 377
P V TY +I AR G E + + + ++++G+ + +S++ GD+ A ++
Sbjct: 269 PDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERI 328
Query: 378 LSDMIDKH--ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL---------IEDAF 426
+ M +K +C +L E C L E + + + D
Sbjct: 329 VQAMREKRRDLC------KVLRE--CNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEV 380
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
S +++ K ++ + PD T++ G K G R+ M
Sbjct: 381 SEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAM 440
Query: 487 IKMDEQ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNS 542
+ D++ P+ Y + ++ D A+ ++ E+ + + + T+N L+ GY
Sbjct: 441 RRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQ 500
Query: 543 GQIDEAFGLTTEM-KSLGLSANRVTYNTLINLLCKNGC---DEEAKEL--MKMMIMQGIR 596
QID A L EM + G+ + V+YN +I +GC D+ A L M +GI
Sbjct: 501 LQIDRAEDLLREMTEDAGIEPDVVSYNIII-----DGCILIDDSAGALAFFNEMRTRGIA 555
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMI 626
P I+YTTL+ F P+ + D M+
Sbjct: 556 PTKISYTTLMKAFAMSGQPKLANRVFDEMM 585
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELRKR----KLLDATTFNTLISGYSNSGQIDEA 548
P+ IY + + G K +++ +R++ D T+ T++S + N+G +D A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPDCITYTTLIT 607
+ EM +G+ ANR+TYN L+ CK + A++L++ M GI PD ++Y +I
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 608 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 647
+A + M +G+ P + +Y ++ F ++
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMS 571
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 340 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 399
+ L EM +RGL N V Y +++ L++ GD + A ++ +M+ + PD +Y IL +G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 400 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 459
LC+NG L +AL +ED + L C S+ +G+ P+
Sbjct: 61 LCKNGKLEKALVAGK-------VEDGWDL------FC-------------SLSLKGVKPN 94
Query: 460 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 519
V T T+I G CK G E+A L+ M + P+ YN+ I + + L+
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 154
Query: 520 ELRK-RKLLDATTFNTLISGYSNSGQIDEAF 549
E+R R DA+T+ L++ + G++D+ F
Sbjct: 155 EMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 184
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSI 291
+ + M + G N V++ +I G + G D+A ++ K+M + V P+ ++YN +
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEM---VSDGVPPDIMTYNIL 57
Query: 292 INGFCKKGGL---LLAEEV------LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 342
++G CK G L L+A +V + G +P+V TY T+I G+ + G EE+ L
Sbjct: 58 LDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTL 117
Query: 343 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 398
+M E G P+ YN+++ R GD +++++ +M D +Y ++T+
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 516 NLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
L E+ +R L+ T T+ TLI G +G D A + EM S G+ + +TYN L++ L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 575 CKNGCDEEAK---------ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
CKNG E+A +L + ++G++P+ +TYTT+I+ F KK EE L M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 626 ILKGVIPDQKTYDAIVTPFL 645
G +PD TY+ ++ L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHL 141
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
L++ M G V N T+ I L + A + M+ DG P+++++N+++DG
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 258 CKTGSLDLAL---KVMKKMNL---MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 311
CK G L+ AL KV +L ++ V PN V+Y ++I+GFCKKG A + M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 312 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
+ G P TY TLI + R G S L EM
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
M+ + N+V+Y ++I G + G +A+E+ +MV G P + TY L+DG + G
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 336 LEESL---------RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
LE++L L + +G+ PN+V Y +++ + G EEA + M +
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
PD +Y L R+G + +L ++ DA + ++ + +
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
M RGL + T T+I G + G+ + A ++ M+ P++ YN ++GLCK
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 511 TDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 570
+ K LV +G++++ + L + G+ N VTY T+
Sbjct: 67 --LEKALV-----------------------AGKVEDGWDLFCSLSLKGVKPNVVTYTTM 101
Query: 571 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
I+ CK G EEA L + M G PD TY TLI
Sbjct: 102 ISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKAL---------RLYNGMIKMDEQPNLTIYNSF 501
M++ G+PPD+ T ++DG CK G EKAL L+ + +PN+ Y +
Sbjct: 42 MVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 101
Query: 502 INGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
I+G CK + A L ++++ L D+ T+NTLI + G + L EM+S
Sbjct: 102 ISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 161
Query: 561 SANRVTYNTLINLL 574
+ + TY + ++L
Sbjct: 162 AGDASTYGLVTDML 175
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKEC 226
E+ RG + + + + L + D D ++K M S G ++ T+N+ + LCK
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNG 65
Query: 227 RVVEAIT---------VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
++ +A+ + + G PNVV++ +I G CK G + A + +KM
Sbjct: 66 KLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKE-- 123
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 328
+ P+S +YN++I + G + E++ +M F TY + D
Sbjct: 124 -DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
T L L+N + + N+ + KS M+ RG+ PD T T+
Sbjct: 157 TAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTI 216
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
I + G ++A+ + M +P+ + I+ + + D+A +L D R K
Sbjct: 217 ISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKW 276
Query: 527 -LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
+DA TF+TLI Y SG D + EMK+LG+ N V YN LI+ + + +AK
Sbjct: 277 RIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKI 336
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 630
+ K +I G P+ TY L+ + + + ++ +A++ M KG+
Sbjct: 337 IYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGL 381
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 156/372 (41%), Gaps = 22/372 (5%)
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEV---LGDMVKAGFEP--------------SVRTYAT 325
PN +I GF GG L ++ L +M P V Y
Sbjct: 124 PNEADVCDVITGF---GGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 180
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
+ + + LE+S +L DEM+ERG+ P+ + +I+ ++G + A + M
Sbjct: 181 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 240
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
PD + A + + R G + AL L+++ DA + + L+ S
Sbjct: 241 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 300
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 505
M G+ P++ +ID + +A +Y +I PN + Y + +
Sbjct: 301 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 360
Query: 506 CKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSL-GLSAN 563
+ D A + E++++ L L +NTL+S +++ +DEAF + +MK+ +
Sbjct: 361 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 420
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 623
T+++LI + +G EA+ + M G P T++I + K ++V+ D
Sbjct: 421 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 480
Query: 624 YMILKGVIPDQK 635
++ G+ PD +
Sbjct: 481 QVLELGITPDDR 492
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 4/261 (1%)
Query: 200 YKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACK 259
++ M SFG + T I A + V A+++ R + + V+F+ +I
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 260 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 319
+G+ D L + ++M + V PN V YN +I+ + A+ + D++ GF P+
Sbjct: 293 SGNYDGCLNIYEEMKAL---GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPN 349
Query: 320 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 379
TYA L+ Y R +++L + EM E+GL +++YN++L + ++EA ++
Sbjct: 350 WSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQ 409
Query: 380 DMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 438
DM + C PD ++++ L +G ++EA Q+ + F L ++ K+
Sbjct: 410 DMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKA 469
Query: 439 XXXXXXXXXXGSMITRGLPPD 459
++ G+ PD
Sbjct: 470 KQVDDVVRTFDQVLELGITPD 490
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Query: 472 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL---- 527
K + EK+ +L++ M++ +P+ + + I+ C V K V+ K
Sbjct: 187 KSKDLEKSEKLFDEMLERGIKPDNATFTTIIS--CAR-QNGVPKRAVEWFEKMSSFGCEP 243
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
D T +I Y +G +D A L ++ + VT++TLI + +G + +
Sbjct: 244 DNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIY 303
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
+ M G++P+ + Y LI + P + ++ +I G P+ TY A+V +
Sbjct: 304 EEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 360
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 144/327 (44%), Gaps = 49/327 (14%)
Query: 310 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
+M K GF A +I+ Y R G E + ++ DEM ER + +N++L
Sbjct: 102 NMSKEGF------VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSK 155
Query: 370 DMEEASKVLSDMIDK-HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 428
+ + ++ K I PD SY L +GLC G TEA+ L ++I L D +
Sbjct: 156 KFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITF 215
Query: 429 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
NILL+ + YTK G E+ +++ M++
Sbjct: 216 NILLH-------------------------ESYTK----------GKFEEGEQIWARMVE 240
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 547
+ + ++ YN+ + GL ++ +L D+L+ +L D TF +I G+ + G++DE
Sbjct: 241 KNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDE 300
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
A E++ G + +N+L+ +CK G E A EL K + + + D ++
Sbjct: 301 AITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVD 360
Query: 608 HF---NKKHHPEEVIAL---HDYMILK 628
+K+ EE++ L +DY+ K
Sbjct: 361 ALVKGSKQDEAEEIVELAKTNDYLQCK 387
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 2/233 (0%)
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
+SFN +++ + DL + K+ L S+ P+ SYN++I G C KG A
Sbjct: 141 ALSFNALLNACVNSKKFDLVEGIFKE--LPGKLSIEPDVASYNTLIKGLCGKGSFTEAVA 198
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
++ ++ G +P T+ L+ G EE ++ MVE+ + +I YN+ L L
Sbjct: 199 LIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLA 258
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
EE + + + PD +++ + +G G L EA+ + +I K F
Sbjct: 259 MENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKF 318
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 479
N LL ICK+ + + L D V+D K ++A
Sbjct: 319 VFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 126/314 (40%), Gaps = 38/314 (12%)
Query: 104 NSRWFTEALSLMRNLIAKEGIAP-LELLEALMDESYQHCPAVFDALVRACT----QVGAT 158
+ WF + +++ + + A E +E +++E ++ + V +VG
Sbjct: 63 QAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMF 122
Query: 159 EGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM-GSFGHVENVNTFNL 217
E A V E+ R C + ++N L+ V D ++K + G +V ++N
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM---- 273
I LC + EA+ +I + G P+ ++FN+++ + G + ++ +M
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 274 ----------------------------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+ + GN + P+ ++ ++I GF +G L A
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
++ K G P + +L+ + G LE + LC E+ + L + V ++ L
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDAL 362
Query: 366 YRHGDMEEASKVLS 379
+ +EA +++
Sbjct: 363 VKGSKQDEAEEIVE 376
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 91/184 (49%), Gaps = 2/184 (1%)
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
A +I+ ++G E A ++++ M + + + +N+ +N D+ + + EL
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 524 RKLL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
+ + D ++NTLI G G EA L E+++ GL + +T+N L++ G E
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 582 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
E +++ M+ + ++ D +Y + ++ EE+++L D + + PD T+ A++
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 642 TPFL 645
F+
Sbjct: 290 KGFV 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQID 546
K+ +P++ YN+ I GLC S A L+DE+ + L D TFN L+ G+ +
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 547 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
E + M + + +YN + L EE L + ++PD T+T +I
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 607 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
F + +E I + + G P + +++++
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLL 324
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 167/386 (43%), Gaps = 17/386 (4%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
N+V++N++++G K G ++ A ++ ++ + VS+ ++I+G +K L A
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITE-------KDIVSWGTMIDGCLRKNQLDEAL 290
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
+M++ G +PS L+ AR + L+L +V+RG + +I+++
Sbjct: 291 VYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFY 350
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
D++ A + + HI S L G +NG + +A ++ +Q +D
Sbjct: 351 AVSNDIKLALQQFEASVKDHIA----SRNALIAGFVKNGMVEQAREVFDQTHD----KDI 402
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRG-LPPDVYTKATVIDGNCKLGNTEKALRLYN 484
FS N +++ +S MI+ + PD T +V LG+ E+ R ++
Sbjct: 403 FSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHD 462
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQ 544
+ PN + + I+ K S + A N+ + + + +N +I G + G
Sbjct: 463 YLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM-QGIRPDCITYT 603
A L ++++SL + N +T+ +++ C G E K + M GI PD Y
Sbjct: 523 AKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYG 582
Query: 604 TLITHFNKKHHPEEVIALHDYMILKG 629
++ K EE + M +K
Sbjct: 583 CMVDLLGKAGRLEEAKEMIKKMPVKA 608
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 101/481 (20%), Positives = 192/481 (39%), Gaps = 100/481 (20%)
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L G+ S G++ N ++ + +CR++ ++R D + SFN+++DG
Sbjct: 68 LKSGLDSNGYICN------SVLNMYAKCRLLADAESVFR---DHAKLDSASFNIMVDGYV 118
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
++ L ALK+ ++M S VSY ++I G+ + A E+ +M G
Sbjct: 119 RSRRLWDALKLF---DVMPERSC----VSYTTLIKGYAQNNQWSEAMELFREMRNLGIML 171
Query: 319 SVRTYATLIDGYARWGS-----------------------------------LEESLRLC 343
+ T AT+I + G L+++ +L
Sbjct: 172 NEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLF 231
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
DEM ER N+V +N +L + G +E+A ++ + +K I S+ + +G R
Sbjct: 232 DEMPER----NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI----VSWGTMIDGCLRK 283
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
L EAL + ++L+ + + LL+ +S G+++ RG + +
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 523
AT+I + + AL+ + +K ++ N+ I G K + A+ + D+
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVK----DHIASRNALIAGFVKNGMVEQAREVFDQTHD 399
Query: 524 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ D ++N +ISGY+ S A L EM +S+++V
Sbjct: 400 K---DIFSWNAMISGYAQSLSPQLALHLFREM----ISSSQV------------------ 434
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 643
+PD IT ++ + + EE HDY+ + P+ AI+
Sbjct: 435 ------------KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDM 482
Query: 644 F 644
+
Sbjct: 483 Y 483
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
+F + + AI + +C +E I+ K+ + + +N II G+ G
Sbjct: 465 NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAK 524
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM-VKAGFEPSVRTY 323
LAL + + + + PNS+++ +++ C G + L + M G EP ++ Y
Sbjct: 525 LALDLYSDLQSLP---IKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHY 581
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
++D + G LEE+ + +M + +++++ +L HG++E
Sbjct: 582 GCMVDLLGKAGRLEEAKEMIKKMPVKA---DVMIWGMLLSASRTHGNVE 627
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 215/483 (44%), Gaps = 73/483 (15%)
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
+++AC+++G +G + L+ G + N + ++ + +++ M
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG-SLDLA 266
V ++N I K +V A + M + N++S+N +I G +T +D+A
Sbjct: 187 SV----SYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIA 240
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
K+ M + +S+NS+I+G+ K G + A+ + M + V T+AT+
Sbjct: 241 SKLFADMPE-------KDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATM 289
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM-IDKH 385
IDGYA+ G + + L D+M R ++V YNS++ ++ EA ++ SDM + H
Sbjct: 290 IDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESH 345
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
+ PD + I+ + + G L++A+ +H I +E F L L
Sbjct: 346 LLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI-----VEKQFYLGGKLG------------ 388
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 505
+ID K G+ + A+ ++ G+ E ++ +N+ I GL
Sbjct: 389 ------------------VALIDMYSKCGSIQHAMLVFEGI----ENKSIDHWNAMIGGL 426
Query: 506 CKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANR 564
+ A +++ ++ + L D TF +++ S+SG + E M+ R
Sbjct: 427 AIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPR 486
Query: 565 VT-YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE----EVI 619
+ Y ++++L ++G E AK L++ M + P+ + + T +T + HH E E++
Sbjct: 487 LQHYGCMVDILSRSGSIELAKNLIEEM---PVEPNDVIWRTFLTACS--HHKEFETGELV 541
Query: 620 ALH 622
A H
Sbjct: 542 AKH 544
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 21/281 (7%)
Query: 366 YRHG-DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
+ HG D +A +L M++ + D++S +++ + R G++ +++H + K L D
Sbjct: 96 HSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSD 155
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
F N L+ K M R D + ++IDG K G A L++
Sbjct: 156 LFLQNCLIGLYLKCGCLGLSRQMFDRMPKR----DSVSYNSMIDGYVKCGLIVSARELFD 211
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMA-STDVAKNLVDELRKRKLLDATTFNTLISGYSNSG 543
M E NL +NS I+G + + D+A L ++ ++ L+ ++N++I GY G
Sbjct: 212 LMPM--EMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLI---SWNSMIDGYVKHG 266
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
+I++A GL M + VT+ T+I+ K G AK L M + D + Y
Sbjct: 267 RIEDAKGLFDVMP----RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR----DVVAYN 318
Query: 604 TLITHF-NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 643
+++ + K+H E + D ++PD T IV P
Sbjct: 319 SMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTL-VIVLP 358
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 175/399 (43%), Gaps = 61/399 (15%)
Query: 211 NVNTFNLA-IYALCKECRVVEAITVIYRMLKD-GTFPNVVSFNMIIDGACKTGSLDLALK 268
+V+ F+L+ + C V+ I+ LK G + ++ N +I K G L L+ +
Sbjct: 118 SVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQ 177
Query: 269 VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 328
+ +M +SVSYNS+I+G+ K G ++ A E+ D++ + + ++ ++I
Sbjct: 178 MFDRMPKR-------DSVSYNSMIDGYVKCGLIVSARELF-DLMPMEMKNLI-SWNSMIS 228
Query: 329 GYARWG-SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
GYA+ ++ + +L +M E+ +++ +NS++ +HG +E+A K L D++ +
Sbjct: 229 GYAQTSDGVDIASKLFADMPEK----DLISWNSMIDGYVKHGRIEDA-KGLFDVMPRR-- 281
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
D ++A + +G + G++ A L +Q+ D++ A++ +++ Y+
Sbjct: 282 -DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV--AYN-SMMAGYVQNKYHMEALEIF 337
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
L PD T V+ +LG KA+ ++ +++
Sbjct: 338 SDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVE------------------- 378
Query: 508 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
K+ L LI YS G I A + +++ + +
Sbjct: 379 ---------------KQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID----HW 419
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
N +I L +G E A +++ + ++PD IT+ ++
Sbjct: 420 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVL 458
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 184/455 (40%), Gaps = 52/455 (11%)
Query: 217 LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
++ Y C + E RM +D ++VS+N II C T + LK +K M
Sbjct: 257 ISAYGKCGNTHMAE------RMFQDAGSWDIVSWNAII---CATAKSENPLKALKLFVSM 307
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
+ PN +Y S++ L ++ G ++K G E + LID YA+ G+L
Sbjct: 308 PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNL 367
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
E+S RLC + + NIV +N++L Y + D + M+ P +Y+++
Sbjct: 368 EDS-RLCFDYIRD---KNIVCWNALLSG-YANKDGPICLSLFLQMLQMGFRPTEYTFSTA 422
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN----------------ILLNYICKSXX 440
+ C +TE +LH+ I++ ++ + L+ +LL++
Sbjct: 423 LKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTS 478
Query: 441 XXXXXXXXGSMITRGL------------PPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
G RG PD + I + E+ + L+ M++
Sbjct: 479 VVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTF--NTLISGYSNSGQID 546
+ +P+ + S ++ K+ + ++ + K A TF N LI Y G I
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 598
Query: 547 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
+ E + N +T+ LI+ L +G +EA E K + G +PD +++ +++
Sbjct: 599 SVMKVFEETRE----KNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISIL 654
Query: 607 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
T +E + L M GV P+ Y V
Sbjct: 655 TACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAV 689
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 127/631 (20%), Positives = 247/631 (39%), Gaps = 112/631 (17%)
Query: 40 CVHLKHRRWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGMLFP----HSLHSS 95
C L R + L LS K FM + V + LD +F SL +
Sbjct: 124 CASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETW 183
Query: 96 CTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLE-----LLEAL-----MDESYQ-HCPA- 143
++ +L + + E + R L+ + G + E +L+ + +D S Q HC A
Sbjct: 184 NHMMSLLGHRGFLKECMFFFRELV-RMGASLTESSFLGVLKGVSCVKDLDISKQLHCSAT 242
Query: 144 ---------VFDALVRACTQVGATE---------GAYDVICELRTRGCLVSVHAWNNFLS 185
V ++L+ A + G T G++D++ +WN +
Sbjct: 243 KKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIV-------------SWNAIIC 289
Query: 186 HLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRML-KDGTF 244
+ + + +L+ M G N T+ +++ + +++ I+ ML K+G
Sbjct: 290 ATAKSENPLKALKLFVSMPEHGFSPNQGTY-VSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 245 PNVVSFNMIIDGACKTGSLD---LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 301
+V N +ID K G+L+ L ++ N+ V +N++++G+ K G
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI----------VCWNALLSGYANKDGP 398
Query: 302 LLAEEVLGDMVKAGFEPSVRTYAT-------------------------------LIDGY 330
+ L M++ GF P+ T++T L+ Y
Sbjct: 399 ICLSLFL-QMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY-RHGDMEEASKVLSDMIDKHICPD 389
A+ + ++L L D P VV +I+ +Y R G E+ K++S + PD
Sbjct: 458 AKNQLMNDALLLLDWASG----PTSVVPLNIVAGIYSRRGQYHESVKLISTLEQ----PD 509
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
S+ I R+ Y E ++L +L+ ++ D ++ +L+ +C
Sbjct: 510 TVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILS-LCSKLCDLTLGSSIH 568
Query: 450 SMITRG--LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
+IT+ D + +ID K G+ ++++ + + NL + + I+ L
Sbjct: 569 GLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVF----EETREKNLITWTALISCLGI 624
Query: 508 MA-STDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
+ + + L D +F ++++ + G + E GL +MK G+
Sbjct: 625 HGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDH 684
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRP 597
Y ++LL +NG +EA+ L++ M P
Sbjct: 685 YRCAVDLLARNGYLKEAEHLIREMPFPADAP 715
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/486 (21%), Positives = 212/486 (43%), Gaps = 26/486 (5%)
Query: 125 APLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFL 184
A ++ EAL +++ ++A++R G + ++ ++++ G + + + L
Sbjct: 380 AAAKVFEALEEKN----DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 185 SHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF 244
S +D++ + + + +N+ N A+ + +C +E I+ + D
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGN-ALVDMYAKCGALEDARQIFERMCD--- 491
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
+ V++N II + + A + K+MNL + + S + GL
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLC---GIVSDGACLASTLKACTHVHGLYQG 548
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
++V VK G + + T ++LID Y++ G ++++ ++ + E ++V N+++
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW----SVVSMNALIAG 604
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
Y ++EEA + +M+ + + P + ++A + E + LT + H QI K +
Sbjct: 605 -YSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 425 AFSLNI-LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
L I LL S + + P + ++ G+ + G E+AL+ Y
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSS---PKSIVLWTGMMSGHSQNGFYEEALKFY 720
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL--RKRKLLDATTFNTLISGYSN 541
M P+ + + + +C + S+ + L LD T NTLI Y+
Sbjct: 721 KEMRHDGVLPDQATFVTVLR-VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 779
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
G + + + EM+ +N V++N+LIN KNG E+A ++ M I PD IT
Sbjct: 780 CGDMKGSSQVFDEMRR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEIT 836
Query: 602 YTTLIT 607
+ ++T
Sbjct: 837 FLGVLT 842
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 178/422 (42%), Gaps = 53/422 (12%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
EA+ V RM +G P+ ++F +I+ + G L K L+ G P+ V++N
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL-------KDARLLFGEMSSPDVVAWN 296
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
+I+G K+G +A E +M K+ + + T +++ +L+ L + E ++
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL 356
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
GL NI V +S++ + ME A+KV + +K+ D + A++ G NG +
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN---DVFWNAMI-RGYAHNGESHKV 412
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
++L + D F+ LL+ S +I + L +++ ++D
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI----------------------NGLCK 507
K G E A +++ M D TI S++ +G C
Sbjct: 473 YAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC- 531
Query: 508 MASTDVAKNLVDELRKRKLL-----------DATTFNTLISGYSNSGQIDEAFGLTTEMK 556
+AST A V L + K + D T ++LI YS G I +A + + +
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 616
+ V+ N LI +N EEA L + M+ +G+ P IT+ T++ H PE
Sbjct: 592 EWSV----VSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIV---EACHKPE 643
Query: 617 EV 618
+
Sbjct: 644 SL 645
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/401 (18%), Positives = 167/401 (41%), Gaps = 50/401 (12%)
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
KV++ + N ++PN +++ +++ ++ + ++ M+K G E + L+
Sbjct: 143 KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALV 202
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
D YA+ + ++ R+ + +V+ PN V + + + G EEA V M D+
Sbjct: 203 DMYAKCDRISDARRVFEWIVD----PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
PD ++ + R G L +A L ++ D++ + N++++ K
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVV----AWNVMISGHGKRGCETVAIEY 314
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
+M + T +V+ + N + L ++ IK+ N+ + +S ++ K
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 508 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
+ A + + L ++ + +N +I GY+++G+ + L +MKS G + + T+
Sbjct: 375 CEKMEAAAKVFEALEEK---NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 568 -----------------------------------NTLINLLCKNGCDEEAKELMKMMIM 592
N L+++ K G E+A+++ + M
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 593 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
+ D +T+ T+I + + + E L M L G++ D
Sbjct: 492 R----DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 121/278 (43%), Gaps = 34/278 (12%)
Query: 97 TLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVG 156
+LL + +NSR TEA +L L + + I ++ ++ +Q G
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIV------------------LWTGMMSGHSQNG 711
Query: 157 ATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFN 216
E A E+R G L + L ++ + ++ + H + T N
Sbjct: 712 FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 217 LAI--YALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
I YA C + ++ + ++ ++ + NVVS+N +I+G K G + ALK+ M
Sbjct: 772 TLIDMYAKCGD---MKGSSQVFDEMRRRS--NVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV-KAGFEPSVRTYATLIDGYARW 333
+ + P+ +++ ++ G + ++ M+ + G E V A ++D RW
Sbjct: 827 ---QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRW 883
Query: 334 GSLEESLRLCDEMVE-RGLFPNIVVYNSILYWLYRHGD 370
G L+E+ D+ +E + L P+ +++S+L HGD
Sbjct: 884 GYLQEA----DDFIEAQNLKPDARLWSSLLGACRIHGD 917
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
++V + ++ G + G + ALK K+M + V P+ ++ +++ L
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMR---HDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
+ + + T TLID YA+ G ++ S ++ DEM R N+V +NS++
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR---SNVVSWNSLINGY 809
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
++G E+A K+ M HI PD+ ++ + G +++ K+ ++
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI 861
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 138/327 (42%), Gaps = 39/327 (11%)
Query: 253 IIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 312
II+ K G +D A+++ + G + YNS+++ C A ++ M+
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDV--YNSLLHALCDVKMFHGAYALIRRMI 209
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ G +P RTYA L++G+ G ++E+ DEM RG P + ++ L G +E
Sbjct: 210 RKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLE 269
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
A +++S M PD ++ IL E + ++G + ++++ K
Sbjct: 270 SAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKL------------- 316
Query: 433 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 492
GL D+ T T+I K+G ++A RL N ++ +
Sbjct: 317 ----------------------GLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHK 354
Query: 493 PNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKLLDATTFNTLISGYSNSGQIDEAFGL 551
P ++Y I G+C+ D A + +++ K + + LI+ G+ +A
Sbjct: 355 PFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANY 414
Query: 552 TTEMKSLGLSANRVTYNTLINLLCKNG 578
EM +GL ++ + + L KNG
Sbjct: 415 LVEMTEMGLVPISRCFDMVTDGL-KNG 440
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 2/292 (0%)
Query: 353 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 412
P + Y + L H E K+L M D + + + E +NG++ +A++L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 413 HNQILKFDLIEDAFSL-NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 471
N + K + + N LL+ +C MI +GL PD T A +++G C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 472 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DAT 530
G ++A + M + P + I GL + AK +V ++ K + D
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 531 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 590
TFN LI S SG+++ + LGL + TY TLI + K G +EA L+
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 591 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ G +P Y +I + ++ + M +K P++ Y ++T
Sbjct: 349 VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLIT 400
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 122/308 (39%), Gaps = 35/308 (11%)
Query: 291 IINGFCKKGGLLLAEEVLGDMVKA-GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
II + K G + A E+ + K G + +V Y +L+ + L M+ +
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 409
GL P+ Y ++ G M+EA + L +M + P +L EGL GYL A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 410 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
++ +++ K + D + NIL+ I KS + GL D+ T T+I
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA 529
K+G ++A RL N ++ +P ++Y I G+C+
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCR---------------------- 369
Query: 530 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 589
+G D+AF ++MK NR Y LI + + G +A +
Sbjct: 370 ------------NGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVE 417
Query: 590 MIMQGIRP 597
M G+ P
Sbjct: 418 MTEMGLVP 425
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 145/367 (39%), Gaps = 50/367 (13%)
Query: 15 FRAFHAGKRFSN----------------PTAAAEDIIFRAICVHLKHRR-WSALEQ---L 54
FR A R SN PT+ + + +++ H K+ W L+Q L
Sbjct: 81 FRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDL 140
Query: 55 SPKLTTFMVNRVVSEFHNSPHL--ALDFYNWVGMLFPHSLHSSCT------LLQVLVNSR 106
S ++ + ++ ++ + H+ A++ +N V P +L T LL L + +
Sbjct: 141 SLDISGETLCFIIEQYGKNGHVDQAVELFNGV----PKTLGCQQTVDVYNSLLHALCDVK 196
Query: 107 WFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVIC 166
F A +L+R +I K G+ P + A+ LV G + A + +
Sbjct: 197 MFHGAYALIRRMIRK-GLKPDKRTYAI--------------LVNGWCSAGKMKEAQEFLD 241
Query: 167 ELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKEC 226
E+ RG + + L+ ++ + M G V ++ TFN+ I A+ K
Sbjct: 242 EMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSG 301
Query: 227 RVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV 286
V I + Y K G ++ ++ +I K G +D A +++ + G+ +P+
Sbjct: 302 EVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC-VEDGHKPFPSL- 359
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
Y II G C+ G A DM P+ Y LI R G ++ EM
Sbjct: 360 -YAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEM 418
Query: 347 VERGLFP 353
E GL P
Sbjct: 419 TEMGLVP 425
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 188/428 (43%), Gaps = 24/428 (5%)
Query: 219 IYALCKECRVVEAITVIYRMLKDGTF-PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
++ C+E R + +++ ++ G P+V+ N ++ C+ SL+ A K+ +M+ +
Sbjct: 89 LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSEL- 147
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
N+VS ++I+ + ++G L A + M+ +G +P Y TL+ +L+
Sbjct: 148 ------NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALD 201
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
++ ++ GL N + I+ + G + A +V M K + L
Sbjct: 202 FGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVK----KPVACTGLM 257
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GL 456
G + G +ALKL ++ + D+F +++L C S + + + GL
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLK-ACASLEELNLGKQIHACVAKLGL 316
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 516
+V ++D K + E A R + + +PN +++ I+G C+M+ + A
Sbjct: 317 ESEVSVGTPLVDFYIKCSSFESACRAFQEI----REPNDVSWSAIISGYCQMSQFEEAVK 372
Query: 517 LVDELRKR--KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
LR + +L++ T+ ++ S + + + L ++ + LI +
Sbjct: 373 TFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMY 432
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
K GC ++A E+ + M PD + +T I+ + E + L + M+ G+ P+
Sbjct: 433 SKCGCLDDANEVFESM----DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
Query: 635 KTYDAIVT 642
T+ A++T
Sbjct: 489 VTFIAVLT 496
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 155/376 (41%), Gaps = 64/376 (17%)
Query: 89 PHSLHSSCTLLQVLVNSRWFTEALSLMRNL---IAKEGIAPLELLEALMDESYQHC---- 141
P S+++ TLL+ LVN R AL R + + + G+ +E + Y C
Sbjct: 183 PSSMYT--TLLKSLVNPR----ALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 142 --PAVFDALVR----ACT-------QVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLV 188
VFD + ACT Q G A + +L T G ++ L
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 189 EVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVV 248
+ +++ +++ + G +E+ + + +C E+ ++ +++ PN V
Sbjct: 297 SLEELNLGKQIHACVAKLG-LESEVSVGTPLVDFYIKCSSFESACRAFQEIRE---PNDV 352
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF-----CKKGGLLL 303
S++ II G C+ + A+K K +L + N+ NS +Y SI C GG +
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFK--SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 304 AEEVLGDMVKAGF--------------------------EPSVRTYATLIDGYARWGSLE 337
A+ + ++ + + P + + I G+A +G+
Sbjct: 411 ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNAS 470
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH-ICPDQYSYAIL 396
E+LRL ++MV G+ PN V + ++L G +E+ L M+ K+ + P Y +
Sbjct: 471 EALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCM 530
Query: 397 TEGLCRNGYLTEALKL 412
+ R+G L EALK
Sbjct: 531 IDIYARSGLLDEALKF 546
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 17/320 (5%)
Query: 256 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 315
G + G ALK+ ++L+T W +S ++ ++ L L +++ + K G
Sbjct: 259 GYTQAGRARDALKLF--VDLVTEGVEW-DSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 316 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 375
E V L+D Y + S E + R E+ E PN V +++I+ + EEA
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIRE----PNDVSWSAIISGYCQMSQFEEAV 371
Query: 376 KVLSDMIDKHICP-DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 434
K + K+ + ++Y + + ++H +K LI + + L+
Sbjct: 372 KTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITM 431
Query: 435 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 494
K SM PD+ I G+ GN +ALRL+ M+ +PN
Sbjct: 432 YSKCGCLDDANEVFESMDN----PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPN 487
Query: 495 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT--FNTLISGYSNSGQIDEAFGLT 552
+ + + + K+ +D + ++ + T ++ +I Y+ SG +DEA
Sbjct: 488 SVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKF- 546
Query: 553 TEMKSLGLSANRVTYNTLIN 572
MK++ + +++ ++
Sbjct: 547 --MKNMPFEPDAMSWKCFLS 564
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 16/198 (8%)
Query: 215 FNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMN 274
+N+ I+ LCK + EA + +L G P+V ++NM+I + SL A K+ +M
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEM- 71
Query: 275 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 334
+ P++++YNS+I+G CK+ L A +V S T+ TLI+GY +
Sbjct: 72 --IRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKAT 120
Query: 335 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 394
+++ + L EM RG+ N++ Y ++++ + GD A + +M+ + ++
Sbjct: 121 RVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFR 180
Query: 395 ILTEGLCRNGYLTEALKL 412
+ LC L +A+ +
Sbjct: 181 DILPQLCSRKELRKAVAM 198
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 424 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
D NI+++ +CK+ +++ GL PDV T +I + + +A +LY
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSG 543
MI+ P+ YNS I+GLCK +N + + RK +TFNTLI+GY +
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCK-------QNKLAQARKVSK-SCSTFNTLINGYCKAT 120
Query: 544 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
++ + L EM G+ AN +TY TLI+ + G A ++ + M+ G+ IT+
Sbjct: 121 RVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFR 180
Query: 604 TLITHFNKKHHPEEVIAL 621
++ + + +A+
Sbjct: 181 DILPQLCSRKELRKAVAM 198
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
+N + L + D ++ + G +V T+N+ I + + A + M
Sbjct: 16 GYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEM 71
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
++ G P+ +++N +I G CK L A KV K + ++N++ING+CK
Sbjct: 72 IRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS------------TFNTLINGYCKA 119
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
+ + +M + G +V TY TLI G+ + G +L + EMV G++ + + +
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 359 NSILYWLYRHGDMEEASKVL---SDMIDKHI 386
IL L ++ +A +L S M+ ++
Sbjct: 180 RDILPQLCSRKELRKAVAMLLQKSSMVSNNV 210
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 54/221 (24%)
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
KVM++ N+ ++ YN II+G CK G A + +++ +G +P V+TY +
Sbjct: 2 FKVMRESNM------DMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMM 55
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
I R+ SL + +L EM+ RGL P+ + YNS++ HG
Sbjct: 56 I----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMI-----HG----------------- 89
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 446
LC+ L +A K+ F N L+N CK+
Sbjct: 90 -------------LCKQNKLAQARKVSKSCSTF---------NTLINGYCKATRVKDGMN 127
Query: 447 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
M RG+ +V T T+I G ++G+ AL ++ M+
Sbjct: 128 LFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
+I G CK G ++A ++ ++ QP++ YN I + +S A+ L E+ +R
Sbjct: 20 IIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRG 75
Query: 526 LL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
L+ D T+N++I G ++ +A +S + T+NTLIN CK ++
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGM 126
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
L M +GI + ITYTTLI F + + + M+ GV T+ I+
Sbjct: 127 NLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 486 MIKMDEQPNLTI----YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYS 540
M K+ + N+ + YN I+GLCK D A N+ L L D T+N +I +S
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 600
+ G+ ++ L EM GL + +TYN++I+ LCK +A+++ K C
Sbjct: 60 SLGRAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCS 107
Query: 601 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
T+ TLI + K ++ + L M +G++ + TY ++ F
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 138/316 (43%), Gaps = 11/316 (3%)
Query: 230 EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS-Y 288
+AI M K P +F ++ C+ G ++ A + M + ++P V +
Sbjct: 207 QAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM-----LASKKLFPVDVEGF 261
Query: 289 NSIINGFCK-KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
N I+NG+C + A+ + +M P+ +Y+ +I +++ G+L +SLRL DEM
Sbjct: 262 NVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMK 321
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+RGL P I VYNS++Y L R +EA K++ + ++ + PD +Y + LC G L
Sbjct: 322 KRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLD 381
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
A + ++ +L + + L + G M L P T ++
Sbjct: 382 VARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLIL 437
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
K E AL+++ M + + N +Y + I GL + A+ + E++ + +
Sbjct: 438 GKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFV 497
Query: 528 DATTFNTLISGYSNSG 543
L+ G
Sbjct: 498 GNPMLQKLLEEQKVKG 513
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 136/292 (46%), Gaps = 22/292 (7%)
Query: 133 LMDESYQHCP--AVFDALVRACTQVGATEGAYDVICELR------TRGCLVSVHAWNNFL 184
+MD+ ++H P F L+ A + G E A + + + G V ++ W N
Sbjct: 214 IMDK-FKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWCNIW 272
Query: 185 SHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF 244
+ + E R+++ MG++ N ++++ I K + +++ + M K G
Sbjct: 273 TDVTEAK------RIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLA 326
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
P + +N ++ + D A+K+MKK+N + P+SV+YNS+I C+ G L +A
Sbjct: 327 PGIEVYNSLVYVLTREDCFDEAMKLMKKLN---EEGLKPDSVTYNSMIRPLCEAGKLDVA 383
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
VL M+ P+V T+ ++ + E++L + +M L P + IL
Sbjct: 384 RNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGK 439
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
L++ E A K+ ++M I + Y +GL G+L +A ++++++
Sbjct: 440 LFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 190 VNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFP-NVV 248
ND + R + M F H F + ALC+ + +A + + FP +V
Sbjct: 202 ANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEE--FMLASKKLFPVDVE 259
Query: 249 SFNMIIDGACKTGS-LDLALKVMKKMNLMTGN-SVWPNSVSYNSIINGFCKKGGLLLAEE 306
FN+I++G C + + A ++ ++M GN + PN SY+ +I+ F K G L +
Sbjct: 260 GFNVILNGWCNIWTDVTEAKRIWREM----GNYCITPNKDSYSHMISCFSKVGNLFDSLR 315
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ +M K G P + Y +L+ R +E+++L ++ E GL P+ V YNS++ L
Sbjct: 316 LYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLC 375
Query: 367 RHGDMEEASKVLSDMIDKHICP 388
G ++ A VL+ MI +++ P
Sbjct: 376 EAGKLDVARNVLATMISENLSP 397
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 99/206 (48%), Gaps = 7/206 (3%)
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
++++ +S +V ++ RLY M G + +N +Y L +E EA+ ++ ++
Sbjct: 296 SYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKL 355
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
++G P+ V++N +I C+ G LD+A V+ M ++ P ++++ + +
Sbjct: 356 NEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLAT---MISENLSPTVDTFHAFLEAVNFE 412
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
L EVLG M + P+ T+ ++ + E +L++ EM + N +Y
Sbjct: 413 KTL----EVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALY 468
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDK 384
+ + L G +E+A ++ S+M K
Sbjct: 469 LATIQGLLSCGWLEKAREIYSEMKSK 494
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 471 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV--AKNLVDELRKRKLL- 527
C+ G+ EKA K+ ++ +N +NG C + TDV AK + E+ +
Sbjct: 235 CRHGHIEKAEEFMLASKKL-FPVDVEGFNVILNGWCNIW-TDVTEAKRIWREMGNYCITP 292
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
+ +++ +IS +S G + ++ L EMK GL+ YN+L+ +L + C +EA +LM
Sbjct: 293 NKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLM 352
Query: 588 KMMIMQGIRPDCITYTTLI 606
K + +G++PD +TY ++I
Sbjct: 353 KKLNEEGLKPDSVTYNSMI 371
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 456 LPPDVYTKATVIDGNCKL-GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
P DV +++G C + + +A R++ M PN Y+ I+ K+ + +
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDS 313
Query: 515 KNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
L DE++KR L +N+L+ + DEA L ++ GL + VTYN++I
Sbjct: 314 LRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRP 373
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 633
LC+ G + A+ ++ MI + + P T+ + N E+ + + M + + P
Sbjct: 374 LCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLGPT 429
Query: 634 QKTY 637
++T+
Sbjct: 430 EETF 433
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
++D +T +A+R ++ M K P + + LC+ + A+ + +K
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLF 254
Query: 526 LLDATTFNTLISGYSN-SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 584
+D FN +++G+ N + EA + EM + ++ N+ +Y+ +I+ K G ++
Sbjct: 255 PVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSL 314
Query: 585 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
L M +G+ P Y +L+ ++ +E + L + +G+ PD TY++++ P
Sbjct: 315 RLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPL 374
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 134/324 (41%), Gaps = 46/324 (14%)
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
++D YA +++R D M + P + +L L RHG +E+A + + + K
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 386 ICP-DQYSYAILTEGLCRNGY--LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 442
+ P D + ++ G C N + +TEA ++ + + NY
Sbjct: 253 LFPVDVEGFNVILNGWC-NIWTDVTEAKRIWRE---------------MGNYC------- 289
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
+ P+ + + +I K+GN +LRLY+ M K P + +YNS +
Sbjct: 290 -------------ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV 336
Query: 503 NGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
L + D A L+ +L + L D+ T+N++I +G++D A + M S LS
Sbjct: 337 YVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLS 396
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
T++ + + E+ E++ M + + P T+ ++ K PE + +
Sbjct: 397 PTVDTFHAFLEAVNF----EKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKI 452
Query: 622 HDYMILKGVIPDQKTYDAIVTPFL 645
M ++ + Y A + L
Sbjct: 453 WAEMDRFEIVANPALYLATIQGLL 476
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/484 (20%), Positives = 202/484 (41%), Gaps = 49/484 (10%)
Query: 125 APLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFL 184
LEL + + + +++++ + T++G + A ++ E+ G + WN+ L
Sbjct: 138 GKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLL 197
Query: 185 SHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF 244
S + K M G + ++ + + A+ + + + +L++ +
Sbjct: 198 SGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLW 257
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
+V +ID KTG L A V M+ N V++NS+++G L A
Sbjct: 258 YDVYVETTLIDMYIKTGYLPYARMVFDMMDA-------KNIVAWNSLVSGLSYACLLKDA 310
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
E ++ M K G +P T+ +L GYA G E++L + +M E+G+ PN+V + +I
Sbjct: 311 EALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
++G+ A KV M ++ + P+ + + L + L L ++H L+ +LI D
Sbjct: 371 CSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICD 430
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
A+ L++ KS + + L + ++ G G E+ + ++
Sbjct: 431 AYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGIAAFS 486
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQ 544
M++ +P DA TF +++S NSG
Sbjct: 487 VMLEAGMEP----------------------------------DAITFTSVLSVCKNSGL 512
Query: 545 IDEAFGLTTEMKS-LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
+ E + M+S G+ + +++LL ++G +EA + ++ M ++PD +
Sbjct: 513 VQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM---SLKPDATIWG 569
Query: 604 TLIT 607
++
Sbjct: 570 AFLS 573
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 175/394 (44%), Gaps = 45/394 (11%)
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
+++N I+ ++G+ + A+++ ++M +G + +++ ++ K G ++
Sbjct: 55 LAWNEIVMVNLRSGNWEKAVELFREMQF-SGAKAYDSTMV--KLLQVCSNKEGFAEGRQI 111
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
G +++ G E +V +LI Y+R G LE S ++ + M +R N+ +NSIL +
Sbjct: 112 HGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTK 167
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
G +++A +L +M + PD ++ L G G +A+ + ++ L S
Sbjct: 168 LGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 428 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
++ LL + + G ++ L DVY + T+ID K G A +++ M
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDE 547
AKN+V +N+L+SG S + + +
Sbjct: 288 --------------------------AKNIV------------AWNSLVSGLSYACLLKD 309
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
A L M+ G+ + +T+N+L + G E+A +++ M +G+ P+ +++T + +
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 608 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+K + + + M +GV P+ T ++
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Query: 481 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYS 540
+++ ++++ + N+++ NS I + ++++ + + ++ R L +++N+++S Y+
Sbjct: 110 QIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL---SSWNSILSSYT 166
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 600
G +D+A GL EM+ GL + VT+N+L++ G ++A ++K M + G++P
Sbjct: 167 KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS 226
Query: 601 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
+ ++L+ + H + A+H Y ++ +Q YD V L+
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGY-----ILRNQLWYDVYVETTLI 267
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 16/262 (6%)
Query: 187 LVEVNDIDRFWRLYKGMGSFGHVENVNT---FNLAIYALCKECRVVEAITVIYRMLKDGT 243
L + ND W + + + +NV T + L +E V EA+ YRM +
Sbjct: 137 LAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHC 196
Query: 244 FPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG---- 299
P+V ++N II+ C+ G+ A ++ +M L G P++ +Y +I+ +C+ G
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQL-PGFRYPPDTYTYTILISSYCRYGMQTG 255
Query: 300 -------GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 352
+ A + +M+ GF P V TY LIDG + + +L L ++M +G
Sbjct: 256 CRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCV 315
Query: 353 PNIVVYNSILYWLYRHGDMEEASKVLSDMID-KHICPDQYSYAILTEGLCRNGYLTEALK 411
PN V YNS + + ++E A +++ M H P +Y L L EA
Sbjct: 316 PNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARD 375
Query: 412 LHNQILKFDLIEDAFSLNILLN 433
L ++++ L+ ++ ++ +
Sbjct: 376 LVVEMVEAGLVPREYTYKLVCD 397
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 113/286 (39%), Gaps = 28/286 (9%)
Query: 354 NIVVYNSI---LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
N+V SI + L G ++EA M + H PD Y+Y + LCR G +A
Sbjct: 161 NVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKAR 220
Query: 411 KLHNQIL--KFDLIEDAFSLNILLNYICK-----------SXXXXXXXXXXGSMITRGLP 457
L +Q+ F D ++ IL++ C+ M+ RG
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 458 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 517
PDV T +IDG CK +AL L+ M PN YNSFI + A +
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEM 340
Query: 518 VDELRK--RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
+ ++K + ++T+ LI + + EA L EM GL TY + + L
Sbjct: 341 MRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALS 400
Query: 576 KNG----CDEEAKELMKMMIMQ------GIRPDCITYTTLITHFNK 611
G DEE + M+ I Q I+P + +F+K
Sbjct: 401 SEGLASTLDEELHKRMREGIQQRYSRVMKIKPTMARKEVVRKYFHK 446
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 34/256 (13%)
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 451
S L + L G++ EAL ++ ++ D ++ N ++N +C+ M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 452 ITRGL--PPDVYTKATVIDGNCKLG---NTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 506
G PPD YT +I C+ G KA+R M + + ++ F+
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIR--RRMWEANRMFREMLFRGFVP--- 281
Query: 507 KMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
D T+N LI G + +I A L +MK+ G N+VT
Sbjct: 282 ---------------------DVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVT 320
Query: 567 YNTLINLLCKNGCDEEAKELMKMM--IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDY 624
YN+ I E A E+M+ M + G+ P TYT LI + E L
Sbjct: 321 YNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIHALVETRRAAEARDLVVE 379
Query: 625 MILKGVIPDQKTYDAI 640
M+ G++P + TY +
Sbjct: 380 MVEAGLVPREYTYKLV 395
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK---RKLLDAT 530
G ++AL + M + +P++ YN+ IN LC++ + A+ L+D+++ R D
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 531 TFNTLISGYSNSG-----------QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 579
T+ LIS Y G ++ EA + EM G + VTYN LI+ CK
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 580 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG-VIPDQKTYD 638
A EL + M +G P+ +TY + I +++ + E I + M G +P TY
Sbjct: 299 IGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYT 358
Query: 639 AIV 641
++
Sbjct: 359 PLI 361
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 195 RFW---RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFN 251
R W R+++ M G V +V T+N I CK R+ A+ + M G PN V++N
Sbjct: 263 RMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYN 322
Query: 252 MIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 311
I T ++ A+++M+ M + G+ V P S +Y +I+ + A +++ +M
Sbjct: 323 SFIRYYSVTNEIEGAIEMMRTMKKL-GHGV-PGSSTYTPLIHALVETRRAAEARDLVVEM 380
Query: 312 VKAGFEPSVRTYATLIDGYARWG---SLEESL 340
V+AG P TY + D + G +L+E L
Sbjct: 381 VEAGLVPREYTYKLVCDALSSEGLASTLDEEL 412
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 506 CKMASTDVAKNLVDELRK-------RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 558
C +A + K L D LR+ + ++ + L+ G + EA MK
Sbjct: 135 CLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEY 194
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR--PDCITYTTLITHFNK----- 611
+ YNT+IN LC+ G ++A+ L+ M + G R PD TYT LI+ + +
Sbjct: 195 HCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQT 254
Query: 612 ------KHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ E + M+ +G +PD TY+ ++
Sbjct: 255 GCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 144 VFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM 203
++ L+ C + A ++ +++T+GC+ + +N+F+ + N+I+ + + M
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Query: 204 GSFGH-VENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTG 261
GH V +T+ I+AL + R EA ++ M++ G P ++ ++ D G
Sbjct: 345 KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 178/384 (46%), Gaps = 23/384 (5%)
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
+WN+ L LV+ ++ RL+ M + + NT L YA C+E ++ + +
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMPQRDLI-SWNTM-LDGYARCRE------MSKAFEL 238
Query: 239 LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 298
+ N VS++ ++ G K G +++A + KM L N V++ II G+ +K
Sbjct: 239 FEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA-----KNVVTWTIIIAGYAEK 293
Query: 299 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 358
G L A+ ++ MV +G + +++ G L +R+ + L N V
Sbjct: 294 GLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVL 353
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
N++L + G++++A V +D+ K D S+ + GL +G+ EA++L +++ +
Sbjct: 354 NALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM-ITRGLPPDVYTKATVIDGNCKLGNTE 477
+ D + +L + SM L P V ++D ++G +
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLK 469
Query: 478 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVAKNLVDELRKRKLLDATTFNTLI 536
+A+++ M +PN+ I+ + + G C+M + D+AK ++D L K D ++ L
Sbjct: 470 EAIKVVQ---TMPMEPNVVIWGALL-GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLS 525
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGL 560
+ Y+ + + + ++MKS+G+
Sbjct: 526 NIYAAAEDWEGVADIRSKMKSMGV 549
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 171/389 (43%), Gaps = 29/389 (7%)
Query: 226 CRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNS 285
CR ++ +++ PNV N +I + A V +M ++ ++
Sbjct: 64 CRQTNLAVRVFNQVQE---PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF---GLFADN 117
Query: 286 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL--EESLRLC 343
+Y ++ + L + + + + K G + LID Y+R G L ++++L
Sbjct: 118 FTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLF 177
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
++M ER + V +NS+L L + G++ +A ++ +M + D S+ + +G R
Sbjct: 178 EKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARC 229
Query: 404 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP-DVYT 462
+++A +L ++ + + + S + ++ K+ M LP +V T
Sbjct: 230 REMSKAFELFEKMPERNTV----SWSTMVMGYSKAGDMEMARVMFDKM---PLPAKNVVT 282
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
+I G + G ++A RL + M+ + + S + + + + L+
Sbjct: 283 WTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 523 KRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 581
+ L +A N L+ Y+ G + +AF + ++ L V++NT+++ L +G +
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDL----VSWNTMLHGLGVHGHGK 398
Query: 582 EAKELMKMMIMQGIRPDCITYTTLITHFN 610
EA EL M +GIRPD +T+ ++ N
Sbjct: 399 EAIELFSRMRREGIRPDKVTFIAVLCSCN 427
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 158/380 (41%), Gaps = 51/380 (13%)
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
V+ +N +I G AL + +M N +S + ++IN G L ++
Sbjct: 284 VILWNSMISGYIANNMKMEALVLFNEMR----NETREDSRTLAAVINACIGLGFLETGKQ 339
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ K G + +TL+D Y++ GS E+ +L E+ + ++ NS++ +
Sbjct: 340 MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY----DTILLNSMIKVYF 395
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
G +++A +V + +K + S+ +T G +NG E L+ +Q+ K DL D
Sbjct: 396 SCGRIDDAKRVFERIENKSL----ISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEV 451
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
SL+ +++ GL D +++ID CK G E R+++ M
Sbjct: 452 SLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM 511
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQID 546
+K DE P +N++ISGY+ +GQ
Sbjct: 512 VKSDEVP--------------------------------------WNSMISGYATNGQGF 533
Query: 547 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK-MMIMQGIRPDCITYTTL 605
EA L +M G+ ++T+ ++ G EE ++L + M + G PD ++ +
Sbjct: 534 EAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCM 593
Query: 606 ITHFNKKHHPEEVIALHDYM 625
+ + + EE I L + M
Sbjct: 594 VDLLARAGYVEEAINLVEEM 613
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 151/349 (43%), Gaps = 29/349 (8%)
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
N ++ + + G + +A + +M + ++ T+I+GY G SLR D M E
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNY----FSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
R + +N ++ + G++ A ++ + M +K D + L G NGY E
Sbjct: 122 RDGYS----WNVVVSGFAKAGELSVARRLFNAMPEK----DVVTLNSLLHGYILNGYAEE 173
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
AL+L ++ + DA +L +L + ++ G+ D +++++
Sbjct: 174 ALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVN 230
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD 528
K G+ LR+ + M++ +P+ ++ I+G + ++ L D R ++
Sbjct: 231 VYAKCGD----LRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI- 285
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
+N++ISGY + EA L EM++ +R T +IN G E K++
Sbjct: 286 --LWNSMISGYIANNMKMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHC 342
Query: 589 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL------HDYMILKGVI 631
G+ D + +TL+ ++K P E L +D ++L +I
Sbjct: 343 HACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMI 391
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 458 PD--VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
PD ++ T+I+G G +LR ++ M + D +N ++G K VA+
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYS----WNVVVSGFAKAGELSVAR 144
Query: 516 NLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
L + + ++ D T N+L+ GY +G +EA L K L SA+ +T T++
Sbjct: 145 RLFNAMPEK---DVVTLNSLLHGYILNGYAEEALRL---FKELNFSADAITLTTVLKACA 198
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 635
+ + K++ +++ G+ D ++L+ + K + + YM+ + PD
Sbjct: 199 ELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD----LRMASYMLEQIREPDDH 254
Query: 636 TYDAIVTPF 644
+ A+++ +
Sbjct: 255 SLSALISGY 263
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 7/240 (2%)
Query: 152 CTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVEN 211
C +G+ A V E+ G V ++++ +S + +++ +L+ M +
Sbjct: 277 CNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPD 336
Query: 212 VNTFNLAIYALCKECRVVEAITVIYRMLKD-GTFPNVVSFNMIIDGACKTGSLDLALKVM 270
+N ++AL K V EA ++ M ++ G PNVV++N +I CK + A +V
Sbjct: 337 RKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVF 396
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
+M L G ++P +Y++ + + G + E+L M K G EP+V TY LI
Sbjct: 397 DEM-LEKG--LFPTIRTYHAFMR-ILRTGEEVF--ELLAKMRKMGCEPTVETYIMLIRKL 450
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
RW + L L DEM E+ + P++ Y +++ L+ +G +EEA +M DK + P++
Sbjct: 451 CRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE 510
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 151/345 (43%), Gaps = 22/345 (6%)
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
+ G+ SVR Y ++I + + + L DEM R P++V ++L + ++ +
Sbjct: 154 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVH 211
Query: 373 EASKVLSDM-----IDKHICPDQYSYAILTEGLCRNGYLTEALKL---HNQILKFDLIED 424
+ K ++ + D + L LCR +++A L + FD
Sbjct: 212 DVGKAINTFHAYKRFKLEMGIDDFQS--LLSALCRYKNVSDAGHLIFCNKDKYPFD---- 265
Query: 425 AFSLNILLNYICKSXXXXXXXXXXG-SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 483
A S NI+LN C M G+ DV + +++I K G+ K L+L+
Sbjct: 266 AKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLF 325
Query: 484 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD--ATTFNTLISGYSN 541
+ M K +P+ +YN+ ++ L K + A+NL+ + + K ++ T+N+LI
Sbjct: 326 DRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCK 385
Query: 542 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 601
+ + +EA + EM GL TY+ + +L + G EE EL+ M G P T
Sbjct: 386 ARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVET 442
Query: 602 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 646
Y LI + + V+ L D M K V PD +Y ++ L
Sbjct: 443 YIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 487
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 181/466 (38%), Gaps = 79/466 (16%)
Query: 169 RTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG-HVENVNTFNLAIYALCKECR 227
+ +G + SV +++ +S L ++ D W L M F + N T + I C
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHD 212
Query: 228 VVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP-NSV 286
V +AI + + + F ++ C+ ++ A + + +P ++
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHL-----IFCNKDKYPFDAK 267
Query: 287 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 346
S+N ++NG+C +I GS E+ R+ EM
Sbjct: 268 SFNIVLNGWC----------------------------NVI------GSPREAERVWMEM 293
Query: 347 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 406
G+ ++V Y+S++ + G + + K+ M + I PD+ Y + L + ++
Sbjct: 294 GNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFV 353
Query: 407 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
+EA L + + +G+ P+V T ++
Sbjct: 354 SEARNLMKTMEE----------------------------------EKGIEPNVVTYNSL 379
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
I CK TE+A ++++ M++ P + Y++F+ L + + L+ ++RK
Sbjct: 380 IKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGC 436
Query: 527 LDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 585
T+ LI D L EMK + + +Y +I+ L NG EEA
Sbjct: 437 EPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYG 496
Query: 586 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 631
K M +G+RP+ + + F+ K + E+ I + KG I
Sbjct: 497 YYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQRITDSKGEVNKGAI 542
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 5/199 (2%)
Query: 454 RGLPPDVYTKATV---IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
R P + T+ I C + + KA+ ++ + + + + S ++ LC+ +
Sbjct: 188 RKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKN 247
Query: 511 TDVAKNLVDELRKRKLLDATTFNTLISGYSNS-GQIDEAFGLTTEMKSLGLSANRVTYNT 569
A +L+ + + DA +FN +++G+ N G EA + EM ++G+ + V+Y++
Sbjct: 248 VSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSS 307
Query: 570 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL-K 628
+I+ K G + +L M + I PD Y ++ K E L M K
Sbjct: 308 MISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK 367
Query: 629 GVIPDQKTYDAIVTPFLLA 647
G+ P+ TY++++ P A
Sbjct: 368 GIEPNVVTYNSLIKPLCKA 386
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 197/480 (41%), Gaps = 71/480 (14%)
Query: 126 PLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCL---------VS 176
P L+ L+ S + P+ AL R T V A E Y + +GC +
Sbjct: 2 PNSLISRLVSPSLRSQPSKISAL-RFLTTVSAAERLYG-----QLQGCTSNLEKELASAN 55
Query: 177 VHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT--- 233
V ++ ++ ++ D ++F G+ F +++ + Y K C +++
Sbjct: 56 VQLDSSCINEVLRRCDPNQF---QSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPD 112
Query: 234 ----VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYN 289
VI K+ F NV + +++ + D AL V++K +V ++V+YN
Sbjct: 113 LIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEF---NVCADTVAYN 169
Query: 290 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 349
+I F KG L +A+ ++ +M G P V TY ++I+GY G ++++ RL EM +
Sbjct: 170 LVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKH 229
Query: 350 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH----ICPDQYSYAILTEGLCRNGY 405
N V Y+ IL + + GDME A ++L++M + I P+ +Y ++ + C
Sbjct: 230 DCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRR 289
Query: 406 LTEALK----------LHNQILKFDLI-------EDAFSLNILLNYICKSXXXXXXXXXX 448
+ EAL + N++ LI ED +L+ L++ + K
Sbjct: 290 VEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFS 349
Query: 449 GS-------------------MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
+ M+ RG+ PD + V C L LY + K
Sbjct: 350 SATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKK 409
Query: 490 DEQPNL--TIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 546
D + + I+ + GLC+ ++ A L + +K+ L + +I +G D
Sbjct: 410 DVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDED 469
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 150/360 (41%), Gaps = 16/360 (4%)
Query: 164 VICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALC 223
VI R C V+V L+ + N D + + F + +NL I
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176
Query: 224 KECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP 283
+ + A +I M G +P+V+++ +I+G C G +D A ++ K+M + +
Sbjct: 177 DKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEM---SKHDCVL 233
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG----FEPSVRTYATLIDGYARWGSLEES 339
NSV+Y+ I+ G CK G + A E+L +M K P+ TY +I + +EE+
Sbjct: 234 NSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEA 293
Query: 340 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS----YAI 395
L + D M RG PN V ++ + + +E K LS +IDK + S ++
Sbjct: 294 LLVLDRMGNRGCMPNRVTACVLIQGVLEN---DEDVKALSKLIDKLVKLGGVSLSECFSS 350
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
T L R EA K+ +L + D + + + +C + +
Sbjct: 351 ATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKD 410
Query: 456 LPP--DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 513
+ D A ++ G C+ GN+ +A +L M+ + ++ I L K D+
Sbjct: 411 VKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDL 470
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 556
YN I ++A L+ E+ L D T+ ++I+GY N+G+ID+A+ L EM
Sbjct: 168 YNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMS 227
Query: 557 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG----IRPDCITYTTLITHFNKK 612
N VTY+ ++ +CK+G E A EL+ M + I P+ +TYT +I F +K
Sbjct: 228 KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK 287
Query: 613 HHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 645
EE + + D M +G +P++ T ++ L
Sbjct: 288 RRVEEALLVLDRMGNRGCMPNRVTACVLIQGVL 320
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 17/246 (6%)
Query: 400 LCRNGYLT-EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
LC L EAL + + +F++ D + N+++ M GL P
Sbjct: 139 LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYP 198
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
DV T ++I+G C G + A RL M K D N Y+ + G+CK + A L+
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258
Query: 519 DELRKRK---LL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
E+ K L+ +A T+ +I + +++EA + M + G NRVT LI
Sbjct: 259 AEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
Query: 574 LCKNGCDEEAKELMKMM----IMQGIR-PDCITYTTL-ITHFNKKHHPEEVIALHDYMIL 627
+ +N DE+ K L K++ + G+ +C + T+ + + E++ L M++
Sbjct: 319 VLEN--DEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRL---MLV 373
Query: 628 KGVIPD 633
+GV PD
Sbjct: 374 RGVRPD 379
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 187/405 (46%), Gaps = 26/405 (6%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+ V++N +I+G + G + A+++ K+M+L + + P+S + S++ G L +
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHL---DGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
++ K GF + + L++ YA+ +E +L D +E + N+V++N +L
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL---DYFLETEV-ENVVLWNVMLVAY 465
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
D+ + ++ M + I P+QY+Y + + R G L ++H+QI+K + +A
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
+ ++L++ K ++ R DV + T+I G + +KAL +
Sbjct: 526 YVCSVLIDMYAK----LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 486 M----IKMDEQPNLTIYNSFINGL--CKMASTDVAKNLVDELRKRKLLDATTFNTLISGY 539
M I+ DE LT S GL K A+ V D N L++ Y
Sbjct: 582 MLDRGIRSDE-VGLTNAVSACAGLQALKEGQQIHAQACVSGFSS----DLPFQNALVTLY 636
Query: 540 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 599
S G+I+E++ L E G + + +N L++ ++G +EEA + M +GI +
Sbjct: 637 SRCGKIEESY-LAFEQTEAG---DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNN 692
Query: 600 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
T+ + + ++ + ++ +H + G + + +A+++ +
Sbjct: 693 FTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 737
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 193/483 (39%), Gaps = 30/483 (6%)
Query: 131 EALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEV 190
E + Q ++ L+ +Q G E A EL R L + +N L+ LV
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM----ELFKRMHLDGLEPDSNTLASLVVA 398
Query: 191 NDID----RFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPN 246
D R +L+ G N N A+ L +C +E T + L + N
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASN-NKIEGALLNLYAKCADIE--TALDYFL-ETEVEN 454
Query: 247 VVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 306
VV +N+++ L + ++ ++M + + PN +Y SI+ + G L L E+
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQI---EEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
+ ++K F+ + + LID YA+ G L+ + +++ R ++V + +++
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW----DILIRFAGKDVVSWTTMIAGYT 567
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
++ ++A M+D+ I D+ L E ++H Q D
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 486
N L+ + + D ++ G + GN E+ALR++ M
Sbjct: 628 FQNALVTLYSRCGKIEESYLA----FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 487 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTF-NTLISGYSNSGQI 545
+ N + S + + A+ K + + K T N LIS Y+ G I
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSI 743
Query: 546 DEAFGLTTEMKSLGLSA-NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
+A E + L +S N V++N +IN K+G EA + MI +RP+ +T
Sbjct: 744 SDA-----EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 798
Query: 605 LIT 607
+++
Sbjct: 799 VLS 801
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 111/531 (20%), Positives = 213/531 (40%), Gaps = 70/531 (13%)
Query: 156 GATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
G GA+ V E+ R ++ WN + L N I + L+ M S N TF
Sbjct: 134 GDLYGAFKVFDEMPER----TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 216 NLAIYALCKECR-------VVEAI--TVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLA 266
+ + A CR VVE I ++Y+ L+D T V N +ID + G +DLA
Sbjct: 190 SGVLEA----CRGGSVAFDVVEQIHARILYQGLRDST----VVCNPLIDLYSRNGFVDLA 241
Query: 267 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 326
+V + L + S+ ++I+G K A + DM G P+ ++++
Sbjct: 242 RRVFDGLRL-------KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSV 294
Query: 327 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 386
+ + SLE +L +++ G + V N+++ + G++ A + S+M +
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-- 352
Query: 387 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 446
D +Y L GL + GY +A++L ++ L D+ +L L+ C +
Sbjct: 353 --DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV-VACSADGTLFRGQ 409
Query: 447 XXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKAL------------------------- 480
+ T+ G + + +++ K + E AL
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 481 ------RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFN 533
R++ M + PN Y S + ++ ++ + + ++ K L+A +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 593
LI Y+ G++D A+ + + V++ T+I + D++A + M+ +
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFA----GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 594 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
GIR D + T ++ +E +H + G D +A+VT +
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 161/378 (42%), Gaps = 17/378 (4%)
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL-LAEEVLGDMVKAGFEPSVRTYATLIDG 329
K+++ + + PN + ++ G K G L ++ ++K G + + L D
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
Y G L + ++ DEM ER +F +N ++ L + E + M+ +++ P+
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIF----TWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 390 QYSYAILTEGLCRNGYLTEAL--KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 447
+ +++ + E CR G + + ++H +IL L + N L++ ++
Sbjct: 186 EGTFSGVLEA-CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV 244
Query: 448 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
+ + D + +I G K +A+RL+ M + P ++S ++ K
Sbjct: 245 FDGLRLK----DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK 300
Query: 508 MASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
+ S ++ + L + K D N L+S Y + G + A + + M + VT
Sbjct: 301 IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ----RDAVT 356
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 626
YNTLIN L + G E+A EL K M + G+ PD T +L+ + LH Y
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 627 LKGVIPDQKTYDAIVTPF 644
G + K A++ +
Sbjct: 417 KLGFASNNKIEGALLNLY 434
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 147/362 (40%), Gaps = 43/362 (11%)
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY----ARWGSLEE 338
P++ Y+ +I+ KKG +A + +M +G P Y LI + + +LE+
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 339 SLRLCDEM--VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
D+M +ER PN+V YN +L + G +++ + + D+ + PD Y++ +
Sbjct: 191 VRGYLDKMKGIERCQ-PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 456
+ +NG + E + L + + CK
Sbjct: 250 MDAYGKNGMIKEMEAV---------------LTRMRSNECK------------------- 275
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 516
PD+ T +ID K EK + + +++ E+P L +NS I K D A+
Sbjct: 276 -PDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 517 LVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
+ ++ + + T+ +I Y G + A + E+ T N ++ + C
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYC 394
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 635
+NG EA +L + PD TY L + K E+V L M G++P+++
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Query: 636 TY 637
+
Sbjct: 455 FF 456
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 176/452 (38%), Gaps = 39/452 (8%)
Query: 2 FLTSIPFKFRSIFFRAFHAGKRFS-NPTAAAEDIIFRAICVHLKHRRWSALEQLSPKLTT 60
F++SIP + H RFS N A R C + RR A + + +
Sbjct: 16 FISSIPKE-------TDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERENR 68
Query: 61 FMVNRVVSEFHNSPHLALDFYNWVGM-------LFPHSLHSSCTLLQVLVNSRWFTE--- 110
+V ++S + L +V + L L S LQ L RW +
Sbjct: 69 VLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRW 128
Query: 111 ------ALSLMRNLIAKEGIAPLE--LLEALMDESYQHCPAVFDALVRA----CTQVGAT 158
S + +++ K+G + L + + + +V++AL+ A + A
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 159 EGAYDVICELR-TRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
E + +++ C +V +N L + +D+ L+K + +V TFN
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
+ A K + E V+ RM + P++++FN++ID K + + K +LM
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK--SLMR 306
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
P ++NS+I + K + AE V M + PS TY +I Y GS+
Sbjct: 307 SKEK-PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 365
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
+ + +E+ E N++L R+G EA K+ + + PD +Y L
Sbjct: 366 RAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 425
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
+ Y +K QIL + +D N
Sbjct: 426 K-----AYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
PNVV++N+++ ++G +D + K +++ + V P+ ++N +++ + K G +
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDM---SPVSPDVYTFNGVMDAYGKNGMIKEM 262
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
E VL M +P + T+ LID Y + E+ + ++ P + +NS++
Sbjct: 263 EAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIIN 322
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYA--ILTEGLCRNGYLTEALKLHNQILKFDLI 422
+ +++A V M D + P +Y I+ G C G ++ A ++ ++ + D +
Sbjct: 323 YGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRV 380
Query: 423 EDAFSLNILLNYICKS 438
A +LN +L C++
Sbjct: 381 LKASTLNAMLEVYCRN 396
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 458 PD--VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
PD VY+K + G K G T A+ L++ M +P+ ++YN+ I + + D AK
Sbjct: 131 PDNGVYSKLISVMG--KKGQTRMAMWLFSEMKNSGCRPDASVYNALITA--HLHTRDKAK 186
Query: 516 NL------VDELR--KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
L +D+++ +R + T+N L+ ++ SG++D+ L ++ +S + T+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 627
N +++ KNG +E + ++ M +PD IT+ LI + KK E++ ++
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306
Query: 628 KGVIPDQKTYDAIV 641
P T+++++
Sbjct: 307 SKEKPTLPTFNSMI 320
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 472 KLGNTEKALRLYNGMIKMDEQ----PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
+LG ++K L+ M +Q P+ +Y+ I+ + K T +A L E++
Sbjct: 106 ELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCR 165
Query: 528 -DATTFNTLISGY----SNSGQIDEAFGLTTEMKSLGL-SANRVTYNTLINLLCKNGCDE 581
DA+ +N LI+ + + +++ G +MK + N VTYN L+ ++G +
Sbjct: 166 PDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVD 225
Query: 582 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ L K + M + PD T+ ++ + K +E+ A+ M PD T++ ++
Sbjct: 226 QVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLI 285
Query: 642 TPF 644
+
Sbjct: 286 DSY 288
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 205/513 (39%), Gaps = 89/513 (17%)
Query: 122 EGIAPLELLEALMDESYQHCPAVFDALVRAC---TQVGATEGAYDVICELRTRGCLVSVH 178
+G + L ++ E F ++++AC + VG + + + +L + L+
Sbjct: 148 QGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLI--- 204
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
A N ++ V N + R++ G+ ++++ +++ I + EA++ + M
Sbjct: 205 AQNALIAMYVRFNQMSDASRVFYGIP----MKDLISWSSIIAGFSQLGFEFEALSHLKEM 260
Query: 239 LKDGTF-PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
L G F PN F GS +LK + + P+ Y S I+G C
Sbjct: 261 LSFGVFHPNEYIF----------GS---SLKACSSL-------LRPD---YGSQIHGLCI 297
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
K E+ G+ + +L D YAR G L + R+ D+ +ER P+
Sbjct: 298 KS------ELAGNAIAG---------CSLCDMYARCGFLNSARRVFDQ-IER---PDTAS 338
Query: 358 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 417
+N I+ L +G +EA V S M PD S L + L++ +++H+ I+
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 418 K--------------------------FDLIED------AFSLNILLNYICKSXXXXXXX 445
K F+L ED + S N +L +
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 505
M+ PD T ++ G ++ + + +++ +K P I N I+
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 506 CKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 565
K S A+ + D + R D +++TLI GY+ SG +EA L EMKS G+ N V
Sbjct: 519 AKCGSLGQARRIFDSMDNR---DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 566 TYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRP 597
T+ ++ G EE +L M + GI P
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISP 608
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 139/318 (43%), Gaps = 16/318 (5%)
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
Y + GSL ++ + D M ER N+V Y S++ ++G EA ++ M+ + + PD
Sbjct: 112 YGKCGSLRDAREVFDFMPER----NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
Q+++ + + + + +LH Q++K + + N L+ +
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR-----FNQMSDA 222
Query: 450 SMITRGLP-PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCK 507
S + G+P D+ + +++I G +LG +AL M+ PN I+ S +
Sbjct: 223 SRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSS 282
Query: 508 MASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 566
+ D + K +L +A +L Y+ G ++ A + +++ + +
Sbjct: 283 LLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER----PDTAS 338
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 626
+N +I L NG +EA + M G PD I+ +L+ K + + +H Y+I
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 627 LKGVIPDQKTYDAIVTPF 644
G + D ++++T +
Sbjct: 399 KWGFLADLTVCNSLLTMY 416
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 25/250 (10%)
Query: 179 AWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRM 238
+WN L+ ++ RL+K M V ++ + L + C + ++ + ++
Sbjct: 440 SWNTILTACLQHEQPVEMLRLFKLM----LVSECEPDHITMGNLLRGCVEISSLKLGSQV 495
Query: 239 ----LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIING 294
LK G P N +ID K GSL A ++ M+ + VS++++I G
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR-------DVVSWSTLIVG 548
Query: 295 FCKKGGLLLAEEVL---GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM-VERG 350
+ + G EE L +M AG EP+ T+ ++ + G +EE L+L M E G
Sbjct: 549 YAQSG---FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHG 605
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
+ P + ++ L R G + EA + + +M + PD + L G + A
Sbjct: 606 ISPTKEHCSCVVDLLARAGRLNEAERFIDEM---KLEPDVVVWKTLLSACKTQGNVHLAQ 662
Query: 411 KLHNQILKFD 420
K ILK D
Sbjct: 663 KAAENILKID 672
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/362 (18%), Positives = 142/362 (39%), Gaps = 27/362 (7%)
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
N VSY S+I G+ + G A + M++ P + ++I A + +L
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
++++ +++ N+++ R M +AS+V + K D S++ + G +
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK----DLISWSSIIAGFSQL 247
Query: 404 GYLTEALKLHNQILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 462
G+ EAL ++L F + + + L G I L +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
++ D + G A R+++ + E+P+ +N I GL D A ++ ++R
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQI----ERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 523 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI-------NLL 574
+ DA + +L+ + + + + + + G A+ N+L+ +L
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 575 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 634
C E+ + D +++ T++T + P E++ L M++ PD
Sbjct: 424 CCFNLFEDFRN----------NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 635 KT 636
T
Sbjct: 474 IT 475
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 172/459 (37%), Gaps = 82/459 (17%)
Query: 249 SFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 308
S+N ++ K G +D + ++ +SVS+ ++I G+ G A V+
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLP-------QRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 309 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 368
GDMVK G EP+ T ++ A +E ++ +V+ GL N+ V NS+L +
Sbjct: 135 GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 194
Query: 369 GDMEEASKVLSDMIDKHICP---------------------------DQYSYAILTEGLC 401
GD A V M+ + I D ++ + G
Sbjct: 195 GDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN 254
Query: 402 RNGYLTEALKLHNQILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 460
+ GY AL + +++L+ L+ D F+L +L+ ++T G
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI--YNSFINGLCKMASTDVAKNLV 518
+I + G E A RL I+ +L I + + ++G K+ + AKN+
Sbjct: 315 IVLNALISMYSRCGGVETARRL----IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIF 370
Query: 519 DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY----------- 567
L+ R D + +I GY G EA L M G N T
Sbjct: 371 VSLKDR---DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 568 ------------------------NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 603
N LI + K G A ++ + D +++T
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE---RDTVSWT 484
Query: 604 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
++I + H EE + L + M+++G+ PD TY + +
Sbjct: 485 SMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFS 523
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/512 (18%), Positives = 211/512 (41%), Gaps = 28/512 (5%)
Query: 135 DESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDID 194
D+ Q + ++ +G A V+ ++ G + N L+ + ++
Sbjct: 104 DQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCME 163
Query: 195 RFWRLYKGMGSFGHVENVNTFN--LAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNM 252
+++ + G NV+ N L +YA C + + A V RM+ ++ S+N
Sbjct: 164 TGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM--AKFVFDRMV----VRDISSWNA 217
Query: 253 IIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 312
+I + G +DLA+ ++M + V++NS+I+GF ++G L A ++ M+
Sbjct: 218 MIALHMQVGQMDLAMAQFEQM-------AERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 313 KAGF-EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 371
+ P T A+++ A L ++ +V G + +V N+++ R G +
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 372 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
E A +++ K + + + L +G + G + +A + + D++ + +
Sbjct: 331 ETARRLIEQRGTKDLKIE--GFTALLDGYIKLGDMNQAKNIFVSLKDRDVV----AWTAM 384
Query: 432 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 491
+ + SM+ G P+ YT A ++ L + +++ +K E
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444
Query: 492 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL 551
++++ N+ I K + A D +R + D ++ ++I + G +EA L
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCER--DTVSWTSMIIALAQHGHAEEALEL 502
Query: 552 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI-MQGIRPDCITYTTLITHFN 610
M GL + +TY + + G + ++ MM + I P Y ++ F
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 611 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
+ +E + M ++ PD T+ ++++
Sbjct: 563 RAGLLQEAQEFIEKMPIE---PDVVTWGSLLS 591
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 128/312 (41%), Gaps = 51/312 (16%)
Query: 297 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 356
K G A+ V ++K+G SV L++ Y++ G + +L DEM R F
Sbjct: 26 KSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFS--- 82
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
+N++L + GDM+ + + + D S+ + G G +A+++
Sbjct: 83 -WNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIVGYKNIGQYHKAIRV---- 133
Query: 417 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 476
G M+ G+ P +T V+
Sbjct: 134 -------------------------------MGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 536
E ++++ ++K+ + N+++ NS +N K +AK + D + R D +++N +I
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR---DISSWNAMI 219
Query: 537 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG-I 595
+ + GQ+D A +M + VT+N++I+ + G D A ++ M+ +
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDI----VTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 596 RPDCITYTTLIT 607
PD T ++++
Sbjct: 276 SPDRFTLASVLS 287
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 212 VNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMK 271
V+ FN+ + A C E + EA + I+ L P+V + N+++ G + G +
Sbjct: 176 VDEFNILLRAFCTEREMKEARS-IFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYH 234
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
+M PNSV+Y I+GFCKK A + DM + F+ +V+ TLI G
Sbjct: 235 EM---VKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSG 291
Query: 332 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 391
+ ++ +L DE+ +RGL P+ YN+++ L + GD+ A KV+ +M +K I PD
Sbjct: 292 VARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSV 351
Query: 392 SYAILTEGLCRN 403
++ + G+ ++
Sbjct: 352 TFHSMFIGMMKS 363
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 133/311 (42%), Gaps = 27/311 (8%)
Query: 349 RGLFPNIVVYNS---ILYWLYRHGDMEEASKVLSDMIDKHICPDQY---SYAILTEGLCR 402
R +PN++ + S +L + + G EE + M +K I ++ + IL C
Sbjct: 130 RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKM-EKEIFRKKFGVDEFNILLRAFCT 188
Query: 403 NGYLTEAL----KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
+ EA KLH+ +F+ D ++NILL ++ M+ RG P
Sbjct: 189 EREMKEARSIFEKLHS---RFN--PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKP 243
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
+ T IDG CK N +ALRL+ M ++D + I + I+G + A+ L
Sbjct: 244 NSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLF 303
Query: 519 DELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK- 576
DE+ KR L D +N L+S G + A + EM+ G+ + VT++++ + K
Sbjct: 304 DEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKS 363
Query: 577 -----NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 631
NG E +++ + + + P T L+ F + L YM+ KG
Sbjct: 364 KEFGFNGVCEYYQKMKE----RSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYC 419
Query: 632 PDQKTYDAIVT 642
P + + T
Sbjct: 420 PHGHALELLTT 430
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIY-RMLKDGTFPNVVSFNMIIDGACKTGSLDLALKV 269
+V T N+ + KE V A + Y M+K G PN V++ + IDG CK + AL++
Sbjct: 209 DVKTMNILLLGF-KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 270 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
+ M+ + + ++I+G + A ++ ++ K G P Y L+
Sbjct: 268 FEDMDRLDFDIT---VQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSS 324
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD--MEEASKVLSDMIDKHIC 387
+ G + ++++ EM E+G+ P+ V ++S+ + + + + M ++ +
Sbjct: 325 LMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLV 384
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 436
P + +L + C NG + L L +L+ +L +L +C
Sbjct: 385 PKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALC 433
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 165/398 (41%), Gaps = 52/398 (13%)
Query: 51 LEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGML---------FPHSLHSSCTLLQV 101
L LSP+ + ++ R+ + H++ AL+F+ + F +LH +
Sbjct: 61 LSSLSPEFVSEVLGRLFAA-HSNGLKALEFFKYSLKSSKSSPTSDSFEKTLH-------I 112
Query: 102 LVNSRWFTEALSLMR-------NLIAKEGIAPL-----------ELLEALMD---ESYQH 140
L R+F +A +LM NL++ + ++ L E LEA + E ++
Sbjct: 113 LARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRK 172
Query: 141 CPAV--FDALVRA-CTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFW 197
V F+ L+RA CT+ E A + +L +R V N L E D+
Sbjct: 173 KFGVDEFNILLRAFCTEREMKE-ARSIFEKLHSRFN-PDVKTMNILLLGFKEAGDVTATE 230
Query: 198 RLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGA 257
Y M G N T+ + I CK+ EA+ + M + V +I G
Sbjct: 231 LFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHG- 289
Query: 258 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 317
+G +K + + ++ + P+ +YN++++ K G + A +V+ +M + G E
Sbjct: 290 --SGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIE 347
Query: 318 PSVRTYATLIDGYARWGSLEESLR-LCD---EMVERGLFPNIVVYNSILYWLYRHGDMEE 373
P T+ ++ G + S E +C+ +M ER L P ++ +G++
Sbjct: 348 PDSVTFHSMFIGMMK--SKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNL 405
Query: 374 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
+ M++K CP ++ +LT LC +A +
Sbjct: 406 GLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFE 443
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 165/401 (41%), Gaps = 54/401 (13%)
Query: 217 LAIYALCKECRVVEAITVIYRM-LKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL 275
+A+YA C+ R+ A TV + L + T +VS+ I+ + G AL++ +M
Sbjct: 161 IALYAKCR--RLGSARTVFEGLPLPERT---IVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
M V P+ V+ S++N F L + +VK G E +L YA+ G
Sbjct: 216 M---DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+ + L D+M PN++++N+++ ++G EA + +MI+K + PD S
Sbjct: 273 VATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ G L +A ++ + + D +D F + L++ K + R
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL----VFDRT 384
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
L DV + +I G G +A+ LY M + PN DV
Sbjct: 385 LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN-----------------DV-- 425
Query: 516 NLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
TF L+ ++SG + E + M ++ + Y +I+LL
Sbjct: 426 ---------------TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLG 470
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 616
+ G ++A E++K M +Q P + L++ K H E
Sbjct: 471 RAGHLDQAYEVIKCMPVQ---PGVTVWGALLSACKKHRHVE 508
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 152/342 (44%), Gaps = 20/342 (5%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
Y S+I+ K L +++ ++ G + S LI + +G + + ++ D++
Sbjct: 24 YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+FP +N+I+ R+ ++A + S+M + PD +++ L + +L
Sbjct: 81 RPQIFP----WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP-PD--VYTKA 464
+H Q+ + D F N L+ K + GLP P+ + +
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS-----ARTVFEGLPLPERTIVSWT 191
Query: 465 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 524
++ + G +AL +++ M KMD +P+ S +N + +++ + K
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 525 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 583
L ++ +L + Y+ GQ+ A L +MKS N + +N +I+ KNG EA
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREA 307
Query: 584 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
++ MI + +RPD I+ T+ I+ + E+ ++++Y+
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
N+ +N I K EAI + + M+ P+ +S I + GSL+ A
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA---- 342
Query: 271 KKMNLMTGNSVWPNSVSYNS-IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 329
+ M G S + + V +S +I+ F K G + A V + + V ++ +I G
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL----DRDVVVWSAMIVG 398
Query: 330 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
Y G E++ L M G+ PN V + +L G + E + M D I P
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQ 458
Query: 390 QYSYAILTEGLCRNGYLTEALKL 412
Q YA + + L R G+L +A ++
Sbjct: 459 QQHYACVIDLLGRAGHLDQAYEV 481
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 114/549 (20%), Positives = 222/549 (40%), Gaps = 57/549 (10%)
Query: 136 ESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDR 195
+S +HC + L +C+ A + + C + G V A++ L L + DR
Sbjct: 137 QSLEHCNGILKRL-ESCSDTNAIKFFDWMRCNGKLVGNFV---AYSLILRVLGRREEWDR 192
Query: 196 FWRLYKGMGSFGHVE-NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMII 254
L K + F + + FN IYA K+ V A + ML+ G PNV + M++
Sbjct: 193 AEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLM 252
Query: 255 DGACKTGSLD---LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 311
K +++ A M+K ++ ++ Y+S+I + + AEEV+ M
Sbjct: 253 GLYQKNWNVEEAEFAFSHMRKFGIVCESA-------YSSMITIYTRLRLYDKAEEVIDLM 305
Query: 312 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 371
+ + + +++ Y++ G +E + + M G PNI+ YN+++ + M
Sbjct: 306 KQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKM 365
Query: 372 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
E A + + + + PD+ SY + EG R EA + ++ + ++F+L L
Sbjct: 366 EAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTL 425
Query: 432 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTK--ATVIDGNCKLGNTEKALRLYNGMIKM 489
+N K M G Y+ ++ K+G + + G
Sbjct: 426 INLQAKYGDRDGAIKTIEDMTGIGCQ---YSSILGIILQAYEKVGKIDVVPCVLKGSFHN 482
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR--------------------KLLDA 529
+ N T ++S + K D L+ E + R +L DA
Sbjct: 483 HIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDA 542
Query: 530 TTF----------------NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
+T+I Y+ G+ EA L +KS G+ +R+ ++ ++ +
Sbjct: 543 VKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRM 602
Query: 574 LCKNGCDEEAKELMKMMIMQ-GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 632
K G EEA ++++M Q I PD + ++ + K +++ L+ + G+
Sbjct: 603 YVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHW 662
Query: 633 DQKTYDAIV 641
+Q+ Y+ ++
Sbjct: 663 NQEMYNCVI 671
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 170/407 (41%), Gaps = 18/407 (4%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS----YNSIINGFCKKGGL 301
N SF+ ++ K G +D L ++++ W +S Y+ +I + G L
Sbjct: 487 NQTSFSSLVMAYVKHGMVDDCLGLLREKK-------WRDSAFESHLYHLLICSCKESGQL 539
Query: 302 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 361
A ++ +++ E ++ +T+ID Y G E+ +L + G+ + + ++ +
Sbjct: 540 TDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIV 599
Query: 362 LYWLYRHGDMEEASKVLSDMID-KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 420
+ + G +EEA VL M + K I PD Y + + + + L+ +I K
Sbjct: 600 VRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSG 659
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID--GNCKLGNTEK 478
+ + N ++N ++ MI G P+ T ++D G KL
Sbjct: 660 IHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVN 719
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLIS 537
L L + K ++ YN+ I K + + ++ + +NTL+
Sbjct: 720 ELFL---LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLD 776
Query: 538 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 597
Y Q+++ + MK + TYN +IN+ + G +E +++K + G+ P
Sbjct: 777 AYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGP 836
Query: 598 DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
D +Y TLI + EE + L M + +IPD+ TY +VT
Sbjct: 837 DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 165/379 (43%), Gaps = 33/379 (8%)
Query: 40 CVHLKHRRWSALEQLSPKLTTFMVN--RVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCT 97
V + + + + E+++ +T+ M++ V+ EF + L L+ L SS
Sbjct: 542 AVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLN------------LKSSGV 589
Query: 98 LLQVLVNS---RWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAV--FDALVRAC 152
+L + S R + +A SL +E + LE+ MDE P V F ++R
Sbjct: 590 VLDRIGFSIVVRMYVKAGSL------EEACSVLEI----MDEQKDIVPDVYLFRDMLRIY 639
Query: 153 TQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENV 212
+ + + +R G + +N ++ +D ++ M +G N
Sbjct: 640 QKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNT 699
Query: 213 NTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKK 272
TFN+ + K ++ + + ++ + K +V+S+N II K +K
Sbjct: 700 VTFNVLLDVYGK-AKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKN 758
Query: 273 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 332
M G SV + +YN++++ + K + +L M K+ P TY +I+ Y
Sbjct: 759 MQF-DGFSV--SLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGE 815
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
G ++E + E+ E GL P++ YN+++ G +EEA ++ +M ++I PD+ +
Sbjct: 816 QGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVT 875
Query: 393 YAILTEGLCRNGYLTEALK 411
Y L L RN EA+K
Sbjct: 876 YTNLVTALRRNDEFLEAIK 894
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 44/319 (13%)
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
S+ +Y LI+ R L +V G+ + ++ + G + +A KV
Sbjct: 15 SIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVF 74
Query: 379 SDMIDKHICPDQYSYAILTEGLC-RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 437
+M + I S ++ G C RNGY E+L ++ K
Sbjct: 75 DEMPKRDI-----SGCVVMIGACARNGYYQESLDFFREMYK------------------- 110
Query: 438 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 497
GL D + +++ + L + E ++ ++K + + I
Sbjct: 111 ----------------DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 498 YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 557
+S I+ K A+ + +L ++ D FN +ISGY+N+ Q DEA L +MK
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQ---DLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 558 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
LG+ + +T+N LI+ +E+ E++++M + G +PD +++T++I+ E+
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 618 VIALHDYMILKGVIPDQKT 636
M+ G+ P+ T
Sbjct: 272 AFDAFKQMLTHGLYPNSAT 290
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 118/302 (39%), Gaps = 42/302 (13%)
Query: 289 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 348
+S+I+ + K G + A +V D+ E + + +I GYA +E+L L +M
Sbjct: 156 SSLIDMYSKFGEVGNARKVFSDLG----EQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 349 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 408
G+ P+++ +N+++ + E+ S++L M PD S+ + GL N +
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 409 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 468
A Q+L L ++ ++ LL G + GL + ++ ++D
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLD 331
Query: 469 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD 528
K G +A+ L+ RK
Sbjct: 332 MYGKCGFISEAMILF--------------------------------------RKTPKKT 353
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
TFN++I Y+N G D+A L +M++ G + +T+ ++ G + + L
Sbjct: 354 TVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFL 413
Query: 589 MM 590
+M
Sbjct: 414 LM 415
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 110/525 (20%), Positives = 200/525 (38%), Gaps = 82/525 (15%)
Query: 91 SLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVR 150
S+ S L++ R F L +L+ GIA L + A + Y C V DA
Sbjct: 15 SIGSYVELIEANGRDRLFCRGRVLHAHLVT-SGIARLTRIAAKLVTFYVECGKVLDA--- 70
Query: 151 ACTQVGATEGAYDVICELRTRGCLVSVHA--WNNFLSHLVEVNDIDRFWRLYKGMGSFGH 208
+D + + GC+V + A N + +D F +YK
Sbjct: 71 --------RKVFDEMPKRDISGCVVMIGACARNGYYQE-----SLDFFREMYK------- 110
Query: 209 VENVNTFNLAIYALCKECRVV---EAITVIY-RMLKDGTFPNVVSFNMIIDGACKTGSLD 264
+ + + +L K R + E +I+ +LK + + +ID K G +
Sbjct: 111 -DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVG 169
Query: 265 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 324
A KV + + V +N++I+G+ A ++ DM G +P V T+
Sbjct: 170 NARKVFSDLG-------EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWN 222
Query: 325 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 384
LI G++ + E+ + + M G P++V + SI+ L + E+A M+
Sbjct: 223 ALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTH 282
Query: 385 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 444
+ P+ + L Y+ ++H
Sbjct: 283 GLYPNSATIITLLPACTTLAYMKHGKEIH------------------------------- 311
Query: 445 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
G + GL + ++ ++D K G +A+ L+ K ++ +T +NS I
Sbjct: 312 ----GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFR---KTPKKTTVT-FNSMIFC 363
Query: 505 LCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
D A L D++ + LD TF +++ S++G D L M++
Sbjct: 364 YANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVP 423
Query: 564 RVT-YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
R+ Y +++LL + G EA E++K M M+ PD + L+
Sbjct: 424 RLEHYACMVDLLGRAGKLVEAYEMIKAMRME---PDLFVWGALLA 465
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 147/350 (42%), Gaps = 23/350 (6%)
Query: 270 MKKMNLMTGNSVWPNSVSYNSII--NG----FCKKGGLLLAEEVLGDMVKAGFEPSVRTY 323
MKK+ ++ + + SY +I NG FC+ G +L A +V +G R
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCR-GRVLHAH-----LVTSGIARLTRIA 54
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
A L+ Y G + ++ ++ DEM +R + +V+ + R+G +E+ +M
Sbjct: 55 AKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA----RNGYYQESLDFFREMYK 110
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKL-HNQILKFDLIEDAFSLNILLNYICKSXXXX 442
+ D + L + RN E K+ H +LKF DAF ++ L++ K
Sbjct: 111 DGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVG 169
Query: 443 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 502
+ + D+ +I G ++AL L M + +P++ +N+ I
Sbjct: 170 NARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALI 225
Query: 503 NGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 561
+G M + + +++ + D ++ ++ISG ++ Q ++AF +M + GL
Sbjct: 226 SGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLY 285
Query: 562 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 611
N T TL+ + KE+ ++ G+ + L+ + K
Sbjct: 286 PNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGK 335
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 147/362 (40%), Gaps = 43/362 (11%)
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY----ARWGSLEE 338
P++ Y+ +I+ KKG +A + +M +G P Y LI + + +LE+
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 339 SLRLCDEM--VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
D+M +ER PN+V YN +L + G +++ + + D+ + PD Y++ +
Sbjct: 191 VRGYLDKMKGIER-CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 456
+ +NG + E + L + + CK
Sbjct: 250 MDAYGKNGMIKEMEAV---------------LTRMRSNECK------------------- 275
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 516
PD+ T +ID K EK + + +++ E+P L +NS I K D A+
Sbjct: 276 -PDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 517 LVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
+ ++ + + T+ +I Y G + A + E+ T N ++ + C
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYC 394
Query: 576 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 635
+NG EA +L + PD TY L + K E+V L M G++P+++
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Query: 636 TY 637
+
Sbjct: 455 FF 456
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 176/452 (38%), Gaps = 39/452 (8%)
Query: 2 FLTSIPFKFRSIFFRAFHAGKRFS-NPTAAAEDIIFRAICVHLKHRRWSALEQLSPKLTT 60
F++SIP + H RFS N A R C + RR A + + +
Sbjct: 16 FISSIPKE-------TDHKWLRFSVNLGDARRSTRTRITCGAISSRRKLAERESAERENR 68
Query: 61 FMVNRVVSEFHNSPHLALDFYNWVGM-------LFPHSLHSSCTLLQVLVNSRWFTEA-- 111
+V ++S + L +V + L L S LQ L RW +
Sbjct: 69 VLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRW 128
Query: 112 -------LSLMRNLIAKEGIAPLE--LLEALMDESYQHCPAVFDALVRA----CTQVGAT 158
S + +++ K+G + L + + + +V++AL+ A + A
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 159 EGAYDVICELR-TRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNL 217
E + +++ C +V +N L + +D+ L+K + +V TFN
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 218 AIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMT 277
+ A K + E V+ RM + P++++FN++ID K + + K +LM
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK--SLMR 306
Query: 278 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 337
P ++NS+I + K + AE V M + PS TY +I Y GS+
Sbjct: 307 SKEK-PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 365
Query: 338 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 397
+ + +E+ E N++L R+G EA K+ + + PD +Y L
Sbjct: 366 RAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 425
Query: 398 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
+ Y +K QIL + +D N
Sbjct: 426 K-----AYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 245 PNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 304
PNVV++N+++ ++G +D + K +++ + V P+ ++N +++ + K G +
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDM---SPVSPDVYTFNGVMDAYGKNGMIKEM 262
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
E VL M +P + T+ LID Y + E+ + ++ P + +NS++
Sbjct: 263 EAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIIN 322
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYA--ILTEGLCRNGYLTEALKLHNQILKFDLI 422
+ +++A V M D + P +Y I+ G C G ++ A ++ ++ + D +
Sbjct: 323 YGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRV 380
Query: 423 EDAFSLNILLNYICKS 438
A +LN +L C++
Sbjct: 381 LKASTLNAMLEVYCRN 396
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 458 PD--VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
PD VY+K + G K G T A+ L++ M +P+ ++YN+ I + + D AK
Sbjct: 131 PDNGVYSKLISVMG--KKGQTRMAMWLFSEMKNSGCRPDASVYNALITA--HLHTRDKAK 186
Query: 516 NL------VDELR--KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
L +D+++ +R + T+N L+ ++ SG++D+ L ++ +S + T+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 627
N +++ KNG +E + ++ M +PD IT+ LI + KK E++ ++
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306
Query: 628 KGVIPDQKTYDAIV 641
P T+++++
Sbjct: 307 SKEKPTLPTFNSMI 320
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 164/365 (44%), Gaps = 26/365 (7%)
Query: 232 ITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSI 291
I + + D N VS+N ++ G ++G LD A +V K+ ++VS+N I
Sbjct: 155 IELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE-------KDAVSWNLI 207
Query: 292 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 351
I+ + KKG + A + M S ++ LI GY ++ + D M ++
Sbjct: 208 ISSYAKKGDMGNACSLFSAMPL----KSPASWNILIGGYVNCREMKLARTYFDAMPQK-- 261
Query: 352 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 411
N V + +++ + GD++ A ++ M K D+ Y + +NG +ALK
Sbjct: 262 --NGVSWITMISGYTKLGDVQSAEELFRLMSKK----DKLVYDAMIACYTQNGKPKDALK 315
Query: 412 LHNQILKFD--LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 469
L Q+L+ + + D +L+ +++ + + G+ D ++ID
Sbjct: 316 LFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDL 375
Query: 470 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-D 528
K G+ KA ++++ + K D Y++ I G A +L + ++K+ +
Sbjct: 376 YMKGGDFAKAFKMFSNLNKKDT----VSYSAMIMGCGINGMATEANSLFTAMIEKKIPPN 431
Query: 529 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
TF L+S YS+SG + E + MK L + Y ++++L + G EEA EL+K
Sbjct: 432 VVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIK 491
Query: 589 MMIMQ 593
M MQ
Sbjct: 492 SMPMQ 496
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 196/464 (42%), Gaps = 38/464 (8%)
Query: 191 NDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSF 250
ND + LY+ M G + T+N A K + +V + K G +V
Sbjct: 111 NDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHIN 170
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
+ +I K G + A K+ ++ ++VS+NS+I+G+ + G A ++
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEI-------TERDTVSWNSMISGYSEAGYAKDAMDLFRK 223
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM-VERGLFPNIVVYNSILYWLYRHG 369
M + GFEP RT +++ + G L RL +EM + + + + + + ++ + G
Sbjct: 224 MEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGKCG 282
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
D++ A +V + MI K D+ ++ + +NG +EA KL ++ K + DA +L+
Sbjct: 283 DLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLS 338
Query: 430 ILLNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 488
+L+ C S + + L ++Y ++D K G E+ALR++ M
Sbjct: 339 TVLS-ACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPV 397
Query: 489 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEA 548
+E +N+ I A L D R TF ++S ++G + +
Sbjct: 398 KNE----ATWNAMITAYAHQGHAKEALLLFD--RMSVPPSDITFIGVLSACVHAGLVHQG 451
Query: 549 FGLTTEMKSL-GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
EM S+ GL Y +I+LL + G +EA E M+ +PD I ++
Sbjct: 452 CRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPG---KPDEIMLAAILG 508
Query: 608 HFNKKH-------------HPEEVIALHDYMILKGVIPDQKTYD 638
+K+ +E +Y+I V+ D K +D
Sbjct: 509 ACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWD 552
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 141/344 (40%), Gaps = 18/344 (5%)
Query: 308 LGDMVKAGF------EPSVRTYATLIDGYAR-WGSLEESLRLCDEMVERGLFPNIVVYNS 360
LGD + F EP+ ++ +I G W E +L L M GL P+ YN
Sbjct: 78 LGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNF 137
Query: 361 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 420
+ + ++ V S + + D + L + G + A KL ++I + D
Sbjct: 138 VFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERD 197
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 480
+ S N +++ ++ M G PD T +++ LG+
Sbjct: 198 TV----SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR 253
Query: 481 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYS 540
L I + + + I+ K D A+ + +++ K+ D + +I+ YS
Sbjct: 254 LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK---DRVAWTAMITVYS 310
Query: 541 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 600
+G+ EAF L EM+ G+S + T +T+++ G E K++ ++ +
Sbjct: 311 QNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY 370
Query: 601 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 644
T L+ + K EE + + + M +K ++ T++A++T +
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAY 410
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 166/381 (43%), Gaps = 46/381 (12%)
Query: 273 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 332
M +M P+ ++ ++ G + + V G +++ GF+ V + +D Y +
Sbjct: 98 MRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGK 157
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
L + ++ EM ER N V + +++ + G++EEA + M ++++ S
Sbjct: 158 CKDLFSARKVFGEMPER----NAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG----S 209
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
+ L +GL ++G L A KL +++ K D+I S +++ K G M+
Sbjct: 210 WNALVDGLVKSGDLVNAKKLFDEMPKRDII----SYTSMIDGYAKG----------GDMV 255
Query: 453 T--------RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 504
+ RG+ DV + +I G + G +A ++++ M + +P+ I ++
Sbjct: 256 SARDLFEEARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSA 313
Query: 505 LCKMASTDVAKNLVDELRKR--KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 562
+M ++ + + L +R K LI + G +D A L EM L
Sbjct: 314 CSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDL-- 371
Query: 563 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 622
V+Y +++ + +GC EA L + M+ +GI PD + +T ++ + EE +
Sbjct: 372 --VSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYF 429
Query: 623 DYMILKGVIPDQKTYDAIVTP 643
+ M +K Y + +P
Sbjct: 430 ELM--------RKKYSILASP 442
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 133/309 (43%), Gaps = 27/309 (8%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
N+ S+N ++DG K+G L A K+ +M + +SY S+I+G+ K G ++ A
Sbjct: 206 NLGSWNALVDGLVKSGDLVNAKKLFDEMPKR-------DIISYTSMIDGYAKGGDMVSAR 258
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
D+ + VR ++ LI GYA+ G E+ ++ EM + + P+ + ++
Sbjct: 259 ----DLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSAC 314
Query: 366 YRHGDMEEASKVLSDMIDK-HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
+ G E KV S + + + Y L + + G++ A KL ++ + DL+
Sbjct: 315 SQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSY 374
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD--VYTKATVIDGNCKLGNTEKALRL 482
+ + + C S M+ G+ PD +T + G +L E+ LR
Sbjct: 375 CSMMEGMAIHGCGSEAIRLFE----KMVDEGIVPDEVAFTVILKVCGQSRL--VEEGLRY 428
Query: 483 YNGMIK---MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGY 539
+ M K + P+ Y+ +N L + A L+ + A+ + +L+ G
Sbjct: 429 FELMRKKYSILASPDH--YSCIVNLLSRTGKLKEAYELIKSMPFEA--HASAWGSLLGGC 484
Query: 540 SNSGQIDEA 548
S G + A
Sbjct: 485 SLHGNTEIA 493
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 157/365 (43%), Gaps = 38/365 (10%)
Query: 274 NLMTGNSVWP-NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 332
N + S++P ++ YN + L EE+ +MVK G E TY+T+I R
Sbjct: 174 NWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKR 233
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
+++ + M + GL P+ V Y++IL + G +EE + + PD +
Sbjct: 234 CNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIA 293
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 452
+++L K+ + +D I Y+ + M
Sbjct: 294 FSVLG-------------KMFGEAGDYDGI----------RYVLQ------------EMK 318
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 512
+ + P+V T+++ + G A L+N M++ PN + + K
Sbjct: 319 SMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAR 378
Query: 513 VAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK-SLGLSANRVTYNTL 570
A L +E++ +K +D +NTL++ ++ G +EA L +MK S+ + +Y +
Sbjct: 379 DALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAM 438
Query: 571 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 630
+N+ G E+A EL + M+ G++ + + T L+ K ++V+ + D I +GV
Sbjct: 439 LNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGV 498
Query: 631 IPDQK 635
PD +
Sbjct: 499 KPDDR 503
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 38/277 (13%)
Query: 219 IYALCKECRVV-EAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD------------- 264
I K C + +AI RM K G P+ V+++ I+D K+G ++
Sbjct: 227 IITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATG 286
Query: 265 -----LALKVMKKM--------------NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
+A V+ KM M V PN V YN+++ + G LA
Sbjct: 287 WKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLAR 346
Query: 306 EVLGDMVKAGFEPSVRTYATLID--GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 363
+ +M++AG P+ +T L+ G ARW ++L+L +EM + + ++YN++L
Sbjct: 347 SLFNEMLEAGLTPNEKTLTALVKIYGKARWA--RDALQLWEEMKAKKWPMDFILYNTLLN 404
Query: 364 WLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 422
G EEA ++ +DM + C PD +SY + G +A++L ++LK +
Sbjct: 405 MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQ 464
Query: 423 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 459
+ L+ + K+ I RG+ PD
Sbjct: 465 VNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 140/335 (41%), Gaps = 38/335 (11%)
Query: 267 LKVMKKMNL-MTGNSVWPNSVSYNSIINGFCKKGGLLL--AEEVLGDMVKAGFEPSVRTY 323
+++++M L M + V ++++Y++II C K L A E M K G P TY
Sbjct: 202 FQLIEEMALEMVKDGVELDNITYSTIIT--CAKRCNLYNKAIEWFERMYKTGLMPDEVTY 259
Query: 324 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 383
+ ++D Y++ G +EE L L + V G P+ + ++ + GD + VL +M
Sbjct: 260 SAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS 319
Query: 384 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 443
+ P+ Y L E + R G A L N++L+ L + +L L+ K+
Sbjct: 320 MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARD 379
Query: 444 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 503
M + P D T+++ +G E+A RL+N M + +
Sbjct: 380 ALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQ------------ 427
Query: 504 GLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 563
C+ D ++ +++ Y + G+ ++A L EM G+ N
Sbjct: 428 --CRP-------------------DNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 598
+ L+ L K ++ + + I +G++PD
Sbjct: 467 VMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 57/114 (50%)
Query: 528 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 587
D T++ ++ YS SG+++E L + G + + ++ L + + G + + ++
Sbjct: 255 DEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVL 314
Query: 588 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ M ++P+ + Y TL+ + P +L + M+ G+ P++KT A+V
Sbjct: 315 QEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV 368
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 152/354 (42%), Gaps = 15/354 (4%)
Query: 279 NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 338
S +VS+ S IN + G L A + DM AG EP+ T+ L+ G + S E
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 339 SLR--LCDEMVERGLFPNIVVYNSILYWLY-RHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+L L + GL N V+ + + +Y + G ++A V M DK + ++
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK----NSVTWNT 145
Query: 396 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 455
+ +G R+G + A K+ +++ + DLI S ++N K M G
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLI----SWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 456 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 515
+ PD ++ LG L ++ ++ D + N+ + NS I+ C+ + A+
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 516 NLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 575
+ + KR ++ ++N++I G++ +G E+ +M+ G + VT+ +
Sbjct: 262 QVFYNMEKRTVV---SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 576 KNGCDEEAKELMKMMIMQ-GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 628
G EE ++M I P Y L+ +++ E+ + L M +K
Sbjct: 319 HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 133/323 (41%), Gaps = 28/323 (8%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNS--VSYNSIINGFCKKGGLLL 303
N V++N +IDG ++G +D A K+ KM P +S+ ++INGF KKG
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKM---------PERDLISWTAMINGFVKKG---Y 186
Query: 304 AEEVL---GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 360
EE L +M +G +P ++ G+L L + ++ + N+ V NS
Sbjct: 187 QEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNS 246
Query: 361 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 420
++ R G +E A +V +M + + S+ + G NG E+L ++ +
Sbjct: 247 LIDLYCRCGCVEFARQVFYNMEKRTVV----SWNSVIVGFAANGNAHESLVYFRKMQEKG 302
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT--RGLPPDVYTKATVIDGNCKLGNTEK 478
DA + L C ++ + P + ++D + G E
Sbjct: 303 FKPDAVTFTGALT-ACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLED 361
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV-AKNLVDELRKRKLLDATTFNTLIS 537
AL+L M +PN + S + + V A+ L+ L + + + L +
Sbjct: 362 ALKLVQ---SMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSN 418
Query: 538 GYSNSGQIDEAFGLTTEMKSLGL 560
Y+ G+ + A + +MK LGL
Sbjct: 419 MYAADGKWEGASKMRRKMKGLGL 441
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 180/403 (44%), Gaps = 29/403 (7%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
NV +N II K G AL+ K+ + V P+ ++ S+I C GL AE
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLR---ESKVSPDKYTFPSVIKA-C--AGLFDAE 123
Query: 306 EVLGDMV-----KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 360
+GD+V GFE + L+D Y+R G L + ++ DEM R ++V +NS
Sbjct: 124 --MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVSWNS 177
Query: 361 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 420
++ HG EEA ++ ++ + I PD ++ + + + + LH LK
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG 237
Query: 421 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 480
+ N L+ K M R D + T+I G KL E+++
Sbjct: 238 VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR----DSVSYNTMICGYLKLEMVEESV 293
Query: 481 RLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK-LLDATTFNTLISG 538
R++ + +D+ +P+L +S + + +AK + + + K +L++T N LI
Sbjct: 294 RMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDV 351
Query: 539 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 598
Y+ G + A + M+ + V++N++I+ ++G EA +L KMM++ + D
Sbjct: 352 YAKCGDMITARDVFNSME----CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 599 CITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
ITY LI+ + + LH I G+ D +A++
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALI 450
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 150/361 (41%), Gaps = 18/361 (4%)
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVK--AGFEPSVRTYATLIDGYARWGSLEESLR 341
+SVSYN++I G+ K L + EE + ++ F+P + T ++++ L +
Sbjct: 272 DSVSYNTMICGYLK---LEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKY 328
Query: 342 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 401
+ + M++ G V N ++ + GDM A V + M C D S+ + G
Sbjct: 329 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME----CKDTVSWNSIISGYI 384
Query: 402 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 461
++G L EA+KL ++ + D + +L++ + + I G+ D+
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444
Query: 462 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 521
+ID K G +L++++ M D +N+ I+ + + ++
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFSSMGTGDT----VTWNTVISACVRFGDFATGLQVTTQM 500
Query: 522 RKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 580
RK +++ D TF + ++ + + G + N LI + K GC
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 581 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 640
E + + + M R D +T+T +I + E+ + M G++PD + AI
Sbjct: 561 ENSSRVFERMS----RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAI 616
Query: 641 V 641
+
Sbjct: 617 I 617
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 172/408 (42%), Gaps = 29/408 (7%)
Query: 209 VENVNTFN---LAIYALCKEC---RVVEAITVIYR-MLKDGTFPNVVSFNMIIDGACKTG 261
+EN++ F L + ++ + C R + IY MLK G N++ID K G
Sbjct: 297 LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG 356
Query: 262 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 321
+ A V M ++VS+NSII+G+ + G L+ A ++ M+ +
Sbjct: 357 DMITARDVFNSMEC-------KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHI 409
Query: 322 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 381
TY LI R L+ L ++ G+ ++ V N+++ + G++ ++ K+ S M
Sbjct: 410 TYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM 469
Query: 382 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 441
D ++ + R G L++ Q+ K +++ D + + L +C S
Sbjct: 470 ----GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP-MCASLAA 524
Query: 442 XXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 500
+ R G ++ +I+ K G E + R++ M + D + +
Sbjct: 525 KRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD----VVTWTG 580
Query: 501 FINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKS-L 558
I + A ++ K ++ D+ F +I S+SG +DE +MK+
Sbjct: 581 MIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHY 640
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
+ Y +++LL ++ +A+E ++ M I+PD + +++
Sbjct: 641 KIDPMIEHYACVVDLLSRSQKISKAEEFIQAM---PIKPDASIWASVL 685
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 158/389 (40%), Gaps = 22/389 (5%)
Query: 220 YALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGN 279
YA C E +T R +V+S+ +I + G +K + M +
Sbjct: 228 YAQCGE------LTSALRAFDMMEEKDVISWTAVISACSRKGH---GIKAIGMFIGMLNH 278
Query: 280 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 339
PN + SI+ ++ L +V +VK + V +L+D YA+ G + +
Sbjct: 279 WFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDC 338
Query: 340 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 399
++ D M R N V + SI+ R G EEA + M +H+ + + +
Sbjct: 339 RKVFDGMSNR----NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 400 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 459
G L +LH QI+K + ++ + + L+ CK + +R D
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR----D 450
Query: 460 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 519
V + +I G LG+ +AL MI+ +PN Y+S + S + +++
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS 510
Query: 520 ELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 578
+K L + + LI Y+ G + EAF + M N V++ +I +NG
Sbjct: 511 IAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP----EKNLVSWKAMIMGYARNG 566
Query: 579 CDEEAKELMKMMIMQGIRPDCITYTTLIT 607
EA +LM M +G D + T+++
Sbjct: 567 FCREALKLMYRMEAEGFEVDDYIFATILS 595
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 169/391 (43%), Gaps = 22/391 (5%)
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
N +I + G L A KV M N+V++ ++I+G+ K G A + D
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPE-------KNTVTWTAMIDGYLKYGLEDEAFALFED 173
Query: 311 MVKAGFE-PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 369
VK G + R + L++ +R E ++ MV+ G+ N++V +S++Y+ + G
Sbjct: 174 YVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCG 232
Query: 370 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 429
++ A + M +K D S+ + R G+ +A+ + +L + + F++
Sbjct: 233 ELTSALRAFDMMEEK----DVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVC 288
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
+L + ++ R + DV+ +++D K G ++++GM
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM--- 345
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 548
N + S I + + A +L +++R L+ + T +++ + G +
Sbjct: 346 -SNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
L ++ + N +TL+ L CK G +A +++ + + D +++T +I+
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR----DVVSWTAMISG 460
Query: 609 FNKKHHPEEVIALHDYMILKGVIPDQKTYDA 639
+ H E + MI +GV P+ TY +
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSS 491
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 159/362 (43%), Gaps = 16/362 (4%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 305
N V++ +IDG K G D A + + + + + N + ++N ++ L
Sbjct: 147 NTVTWTAMIDGYLKYGLEDEAFALFE--DYVKHGIRFTNERMFVCLLNLCSRRAEFELGR 204
Query: 306 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 365
+V G+MVK G ++ ++L+ YA+ G L +LR D M E+ +++ + +++
Sbjct: 205 QVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEK----DVISWTAVISAC 259
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 425
R G +A + M++ P++++ + + L ++H+ ++K + D
Sbjct: 260 SRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDV 319
Query: 426 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
F L++ K M R + T ++I + + G E+A+ L+
Sbjct: 320 FVGTSLMDMYAKCGEISDCRKVFDGMSNR----NTVTWTSIIAAHAREGFGEEAISLFRI 375
Query: 486 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQ 544
M + N S + + + + K L ++ K + + +TL+ Y G+
Sbjct: 376 MKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGE 435
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
+AF + ++ S + V++ +I+ G + EA + +K MI +G+ P+ TY++
Sbjct: 436 SRDAFNVLQQLPSRDV----VSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSS 491
Query: 605 LI 606
+
Sbjct: 492 AL 493
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 157/382 (41%), Gaps = 47/382 (12%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
+ I+ C + L A ++LG K P TY LI ++ +LEE ++ + +
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
G P IV++N +L + G + +A KV +M ++ +C S+ ++ G G L
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLC----SWNVMVNGYAEVGLLE 168
Query: 408 EALKLHNQILKFDLIEDAFSLNILL-NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 466
EA KL +++ + +D++S ++ Y+ K P+++T +
Sbjct: 169 EARKLFDEMTE----KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 467 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 526
+ + + ++ +++ + +++S ++ K D A+N+ D++ ++
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK-- 282
Query: 527 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
D ++ ++I Y S + E F L +E+ N T+ ++N +E K++
Sbjct: 283 -DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQV 341
Query: 587 MKMMIMQGI-------------------------------RPDCITYTTLITHFNKKHHP 615
M G +PD +++T+LI + P
Sbjct: 342 HGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQP 401
Query: 616 EEVIALHDYMILKGVIPDQKTY 637
+E + D ++ G PD T+
Sbjct: 402 DEALKYFDLLLKSGTKPDHVTF 423
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 109/544 (20%), Positives = 222/544 (40%), Gaps = 73/544 (13%)
Query: 57 KLTT---FMVNRVVSEFHNSPHLALDFYNWVGMLFPHSLHSSCTLLQVLVNSRWFTEALS 113
KLTT F++ R +S FH S D F + +++ L + F EA+
Sbjct: 8 KLTTLHGFILKRNLSSFHASLKRFSD-----KKFFNPNHEDGGVVVERLCRANRFGEAID 62
Query: 114 LMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGC 173
++ G L L+ + + + + L++ C+Q A E V +RT G
Sbjct: 63 VLC------GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF 116
Query: 174 LVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAIT 233
+ + WN L + + +++ M + ++ ++N+ + + + EA
Sbjct: 117 VPGIVIWNRLLRMYAKCGSLVDARKVFDEMPN----RDLCSWNVMVNGYAEVGLLEEARK 172
Query: 234 VIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIIN 293
+ M + ++ S+ ++ G K + AL + M + + PN + + +
Sbjct: 173 LFDEMTEKDSY----SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSR--PNIFTVSIAVA 226
Query: 294 GFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP 353
+ +E+ G +V+AG + +++L+D Y + G ++E+ + D++VE+
Sbjct: 227 AAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK---- 282
Query: 354 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 413
++V + S++ ++ E + S+++ P++Y++A G L L
Sbjct: 283 DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFA---------GVLNACADLT 333
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
+ L + G M G P + ++++D K
Sbjct: 334 TEELGKQV--------------------------HGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTF 532
GN E A + +G K P+L + S I G + D A D L K D TF
Sbjct: 368 GNIESAKHVVDGCPK----PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
Query: 533 NTLISGYSNSGQID---EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 589
++S +++G ++ E F TE L +++ Y L++LL ++G E+ K ++
Sbjct: 424 VNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH--YTCLVDLLARSGRFEQLKSVISE 481
Query: 590 MIMQ 593
M M+
Sbjct: 482 MPMK 485
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 173/400 (43%), Gaps = 29/400 (7%)
Query: 212 VNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMK 271
N F AI LC + + EA+ ++ R K P ++ +I +T +L+ KV +
Sbjct: 54 ANRFGEAIDVLCGQKLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHE 109
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
++ T V P V +N ++ + K G L+ A +V +M + ++ +++GYA
Sbjct: 110 --HIRTSGFV-PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR----DLCSWNVMVNGYA 162
Query: 332 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK--HICPD 389
G LEE+ +L DEM E+ + + Y D E + VL ++ + + P+
Sbjct: 163 EVGLLEEARKLFDEMTEKDSYSWTAMVTG-----YVKKDQPEEALVLYSLMQRVPNSRPN 217
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
++ +I + ++H I++ L D + L++ K
Sbjct: 218 IFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFD 277
Query: 450 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 509
++ + DV + ++ID K + L++ ++ E+PN + +N +
Sbjct: 278 KIVEK----DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLT 333
Query: 510 STDVAKNLVDELRKRKLLDATTF--NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 567
+ ++ K V R D +F ++L+ Y+ G I+ A + L V++
Sbjct: 334 TEELGKQ-VHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL----VSW 388
Query: 568 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
+LI +NG +EA + +++ G +PD +T+ +++
Sbjct: 389 TSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLS 428
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 117/268 (43%), Gaps = 6/268 (2%)
Query: 253 IIDGACKTGSLDLALKVMKKM-NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 311
II K G + A KV ++M N SV +S+N++++ + + EE+ ++
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSV----LSFNALLSAYRLSKKFDVVEELFNEL 170
Query: 312 V-KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 370
K +P + +Y TLI SL E++ L DE+ +GL P+IV +N++L Y G
Sbjct: 171 PGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ 230
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 430
E ++ + M++K++ D +Y GL E + L ++ L D FS N
Sbjct: 231 FELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNA 290
Query: 431 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
++ ++ G PD T A ++ CK G+ E A+ L+
Sbjct: 291 MIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKR 350
Query: 491 EQPNLTIYNSFINGLCKMASTDVAKNLV 518
T ++ L K + + A+ +V
Sbjct: 351 YLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 118/244 (48%), Gaps = 10/244 (4%)
Query: 198 RLYKGMGSFGHVENVNTFN--LAIYALCKECRVVEAITVIYRML--KDGTFPNVVSFNMI 253
++++ M + +V +FN L+ Y L K+ VVE + + L K P++VS+N +
Sbjct: 130 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEEL---FNELPGKLSIKPDIVSYNTL 186
Query: 254 IDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 313
I C+ SL A+ ++ ++ + P+ V++N+++ KG L EE+ MV+
Sbjct: 187 IKALCEKDSLPEAVALLDEIE---NKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE 243
Query: 314 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 373
+RTY + G A +E + L E+ GL P++ +N+++ G M+E
Sbjct: 244 KNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDE 303
Query: 374 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 433
A +++ PD+ ++A+L +C+ G A++L + + +L L++
Sbjct: 304 AEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVD 363
Query: 434 YICK 437
+ K
Sbjct: 364 ELVK 367
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 8/280 (2%)
Query: 154 QVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGM-GSFGHVENV 212
+ G E A V E+ R C SV ++N LS D L+ + G ++
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 180
Query: 213 NTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKK 272
++N I ALC++ + EA+ ++ + G P++V+FN ++ + G +L ++ K
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAK 240
Query: 273 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 332
M +V + +YN+ + G + + G++ +G +P V ++ +I G
Sbjct: 241 M---VEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 333 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 392
G ++E+ E+V+ G P+ + +L + + GD E A ++ + K Q +
Sbjct: 298 EGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTT 357
Query: 393 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
L + L + EA +I+K D L + L
Sbjct: 358 LQQLVDELVKGSKREEA----EEIVKIAKTNDFLKLKLNL 393
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 4/194 (2%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGN-SVWPNSVSYNSIINGFCKKGGLLLA 304
+V+SFN ++ + D+ V + N + G S+ P+ VSYN++I C+K L A
Sbjct: 143 SVLSFNALLSAYRLSKKFDV---VEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEA 199
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
+L ++ G +P + T+ TL+ G E + +MVE+ + +I YN+ L
Sbjct: 200 VALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG 259
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 424
L +E + ++ + PD +S+ + G G + EA + +I+K D
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 425 AFSLNILLNYICKS 438
+ +LL +CK+
Sbjct: 320 KATFALLLPAMCKA 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 130/336 (38%), Gaps = 12/336 (3%)
Query: 312 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 371
V A P ++ +L++G + E + E ER NI VY+ + L +
Sbjct: 33 VTAAISPPQKSLTSLVNGERNPKRIVEKFKKACES-ER-FRTNIAVYDRTVRRLVAAKRL 90
Query: 372 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 431
++L + + A + + G A K+ ++ D S N L
Sbjct: 91 HYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNAL 150
Query: 432 LNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 490
L+ S + + + PD+ + T+I C+ + +A+ L + +
Sbjct: 151 LSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKG 210
Query: 491 EQPNLTIYN-----SFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQI 545
+P++ +N S++ G ++ AK + K +D T+N + G +N +
Sbjct: 211 LKPDIVTFNTLLLSSYLKGQFELGEEIWAKMV----EKNVAIDIRTYNARLLGLANEAKS 266
Query: 546 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 605
E L E+K+ GL + ++N +I G +EA+ K ++ G RPD T+ L
Sbjct: 267 KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326
Query: 606 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+ K E I L K + Q T +V
Sbjct: 327 LPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLV 362
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 214 TFNLAIYALCKECRVVEAI-TVIYRMLKDGTFPNVVSFNMIIDG-ACKTGSLDLALKVMK 271
T+ + +YA E ++ E + + Y+ML+ P N I+D G L A ++ K
Sbjct: 123 TYLIKVYA---EAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFK 179
Query: 272 KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 331
L + V PN+ SYN ++ FC L +A ++ G M++ P V +Y LI G+
Sbjct: 180 SSRL---HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFC 236
Query: 332 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 391
R G + ++ L D+M+ +G P+ +++ L G +E K L +MI K P
Sbjct: 237 RKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 292
Query: 392 SYAILTEGLCRNGYLTEALKLHNQILK 418
L +G C G + EA + ++K
Sbjct: 293 VSNCLVKGFCSFGKVEEACDVVEVVMK 319
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/371 (18%), Positives = 152/371 (40%), Gaps = 27/371 (7%)
Query: 22 KRFSNPTAAAEDIIFRAICVHLKHRRWSALEQLSPKLTTFMVNRVVSEFHNSPHLALDFY 81
+ ++P + + +F + H + R+ SP + V ++++ + P LA + +
Sbjct: 14 RHLTSPLSTSSRFLFYSSSEH-EARKPIVSNPKSPIGSPTRVQKLIAS-QSDPLLAKEIF 71
Query: 82 NWVGML--FPHSLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQ 139
++ F HS S L+ L R+F +L+ +++AK Y
Sbjct: 72 DYASQQPNFRHSRSSHLILILKLGRGRYF----NLIDDVLAKH-----------RSSGYP 116
Query: 140 HCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVND-IDRFWR 198
+F L++ + E ++ N L LV + + +
Sbjct: 117 LTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE 176
Query: 199 LYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC 258
L+K G + N ++NL + A C + A + +ML+ P+V S+ ++I G C
Sbjct: 177 LFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFC 236
Query: 259 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 318
+ G ++ A++++ M + V ++I G C +G ++ L +M+ GF P
Sbjct: 237 RKGQVNGAMELLDDM-------LNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 289
Query: 319 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 378
L+ G+ +G +EE+ + + +++ G + + ++ + + E+ L
Sbjct: 290 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFL 349
Query: 379 SDMIDKHICPD 389
D + + I D
Sbjct: 350 EDAVKEEITGD 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 8/232 (3%)
Query: 303 LAEEVLG---DMVKAGFEPSVRTYATLIDG-YARWGSLEESLRLCDEMVERGLFPNIVVY 358
L E+VL M++ F P + ++D + G L+++ L G+ PN Y
Sbjct: 134 LPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSY 193
Query: 359 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 418
N ++ + D+ A ++ M+++ + PD SY IL +G CR G + A++L + +L
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 419 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 478
+ D L+ +C MI++G P ++ G C G E+
Sbjct: 254 KGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 309
Query: 479 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT 530
A + ++K E + + I +C ++ K +++ K ++ T
Sbjct: 310 ACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT 361
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 5/169 (2%)
Query: 474 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTF 532
G +KA L+ PN YN + C +A L ++ +R ++ D ++
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
LI G+ GQ++ A L +M + G +R TLI LC G +E K+ ++ MI
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 593 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+G P L+ F EE + + ++ G T++ ++
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 455 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 514
G+ P+ + ++ C + A +L+ M++ D P++ Y I G C+ + A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 515 KNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 574
L+D++ + + TLI G + G DE EM S G S + N L+
Sbjct: 245 MELLDDMLNKGFVPD---RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 301
Query: 575 CKNGCDEEAKELMKMMIMQG 594
C G EEA +++++++ G
Sbjct: 302 CSFGKVEEACDVVEVVMKNG 321
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 101/176 (57%), Gaps = 4/176 (2%)
Query: 229 VEAITVIYRMLKD-GTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS 287
+E + ++R + D G P+V + N ++ G + ++ AL++ +M+++ PNS +
Sbjct: 269 METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVY--DCEPNSFT 326
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
Y+ +I+G C +G + A E+L +M GF P+ ++Y +L++ +A G ++++++ EM+
Sbjct: 327 YDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMI 386
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
E G + + Y +++ R G +EA+++L + +K + D+ SY L L ++
Sbjct: 387 ENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVNVLHKD 441
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 17/234 (7%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAG---FEPSVRTYATLIDGYARWGS--------L 336
YNSII F K G L+ A + MV + P++RTY L G+ +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 337 EESLRLCDEMVERGLFPNIVVYNSIL--YWLYRHGDMEEASKVLSDMIDKHIC-PDQYSY 393
E L +MV+ G+ P++ N ++ Y L H + +A ++ M + C P+ ++Y
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLH--VNDALRIFHQMSVVYDCEPNSFTY 327
Query: 394 AILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 453
L GLC G A +L +++ + + S N L+N S MI
Sbjct: 328 DYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE 387
Query: 454 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 507
G D + T++D +C+ G ++A RL M++ + + Y+ +N L K
Sbjct: 388 NGRVVDFISYRTLVDESCRKGKYDEATRLLE-MLREKQLVDRDSYDKLVNVLHK 440
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 10/242 (4%)
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTF---PNVVSFNMIIDGACKTG 261
S H+ N N +N I+ K +++ A+ + M+ P + +++++ G
Sbjct: 200 SVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRG 259
Query: 262 SLD----LALKVMKKM-NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM-VKAG 315
+ + ++ ++ + M + + P+ + N ++ G+ + A + M V
Sbjct: 260 NNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYD 319
Query: 316 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 375
EP+ TY LI G G + L EM +G PN YNS++ G++++A
Sbjct: 320 CEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAV 379
Query: 376 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 435
K L +MI+ D SY L + CR G EA +L + + L+ D S + L+N +
Sbjct: 380 KCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVNVL 438
Query: 436 CK 437
K
Sbjct: 439 HK 440
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 66/289 (22%)
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDK---HICPDQYSYAILTEGLCRNGYLTEALKLH 413
+YNSI+++ + G + A + M+ P +Y IL + L G +
Sbjct: 209 LYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRG--------N 260
Query: 414 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 473
N + +E SL M+ G+ PDV+ ++ G
Sbjct: 261 NSYINHVYMETVRSL-------------------FRQMVDSGIEPDVFALNCLVKGYVLS 301
Query: 474 GNTEKALRLYNGM-IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTF 532
+ ALR+++ M + D +PN Y+ I+GLC T + R+LL
Sbjct: 302 LHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRT---------INARELL----- 347
Query: 533 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 592
+EMK G N +YN+L+N +G ++A + + MI
Sbjct: 348 --------------------SEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE 387
Query: 593 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
G D I+Y TL+ +K +E L + + K ++ D+ +YD +V
Sbjct: 388 NGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLV 435
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 153/358 (42%), Gaps = 26/358 (7%)
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTG 278
+Y+LC EAI R+L D + ++ F+ + G + G+ L V++K T
Sbjct: 180 MYSLCSGNG--EAI----RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRK----TA 229
Query: 279 NS--VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
N VW N+++Y S + F L LA +V MV+ GF V LI+ Y + G +
Sbjct: 230 NEDFVW-NNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKV 288
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
+ R+ D+ + +F N + ++ ++ EEA + S M K + P++Y++AIL
Sbjct: 289 LYAQRVFDDTHAQNIFLNTTIMDA----YFQDKSFEEALNLFSKMDTKEVPPNEYTFAIL 344
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 456
+ L + LH +LK N L+N KS M R
Sbjct: 345 LNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-- 402
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 516
D+ T T+I G G +AL ++ MI E PN + + + + +
Sbjct: 403 --DIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLH 460
Query: 517 LVDELRKRKLL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 572
++L K+ + D + ++ S +G +A M++ + + V + TL+N
Sbjct: 461 YFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDF---MRTAPIEWDVVAWRTLLN 515
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 176/429 (41%), Gaps = 30/429 (6%)
Query: 219 IYALCKECRVVEAITVIYRMLKDGTFP--NVVSFNMIIDGACKTGSLDLALKVMKKMNLM 276
+Y C+E TV R L D P NVVS+ ++ G +G LK+ K M
Sbjct: 78 LYVKCRE-------TVRARKLFD-LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM-FF 128
Query: 277 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 336
+G S PN + G + ++ G +K G TL+ Y+
Sbjct: 129 SGESR-PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN 187
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 396
E++R+ D++ + ++ V++S L G +E VL ++ + +Y
Sbjct: 188 GEAIRVLDDLP----YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSS 243
Query: 397 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 456
L AL++H+++++F + + L+N K +
Sbjct: 244 LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQ-- 301
Query: 457 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA---STDV 513
+++ T++D + + E+AL L++ M + PN + +N + +++ D+
Sbjct: 302 --NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDL 359
Query: 514 AKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 573
LV L+ N L++ Y+ SG I++A + M + VT+NT+I+
Sbjct: 360 LHGLV--LKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI----VTWNTMISG 413
Query: 574 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK-GVIP 632
+G EA E MI G P+ IT+ ++ + E+ + + ++ K V P
Sbjct: 414 CSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQP 473
Query: 633 DQKTYDAIV 641
D + Y IV
Sbjct: 474 DIQHYTCIV 482
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/426 (19%), Positives = 175/426 (41%), Gaps = 80/426 (18%)
Query: 248 VSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 307
V++N++I+G +G + A+K M M S V+ +++ G + L +++
Sbjct: 104 VTWNVLIEGYSLSGLVGAAVKAYNTM--MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQI 161
Query: 308 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 367
G ++K GFE + + L+ YA G + ++ ++ + +R N V+YNS++ L
Sbjct: 162 HGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR----NTVMYNSLMGGLLA 217
Query: 368 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 427
G +E+A ++ M D S+A + +GL +NG EA++ +
Sbjct: 218 CGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFRE------------ 260
Query: 428 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 487
M +GL D Y +V+ LG + +++ +I
Sbjct: 261 -----------------------MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 488 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDE 547
+ + Q ++ + ++ I+ CK AK + D ++++ ++ ++ ++ GY +G+ +E
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV---SWTAMVVGYGQTGRAEE 354
Query: 548 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI------------ 595
A + +M+ G+ + T I+ EE + I G+
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 596 -------------------RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 636
D +++T +++ + + E I L D M+ G+ PD T
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVT 474
Query: 637 YDAIVT 642
+++
Sbjct: 475 LTGVIS 480
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 132/305 (43%), Gaps = 15/305 (4%)
Query: 253 IIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 312
+ID CK L A V +M N VS+ +++ G+ + G A ++ DM
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQ-------KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 313 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 372
++G +P T I A SLEE + + + GL + V NS++ + GD++
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 373 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 432
+++++ ++M + D S+ + + G E ++L +++++ L D +L ++
Sbjct: 424 DSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 433 NYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 491
+ ++ M + G+ P + + +ID + G E+A+R NG M
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING---MPF 536
Query: 492 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL 551
P+ + + ++ + ++ K + L + + L S Y++ G+ D L
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQL 596
Query: 552 TTEMK 556
M+
Sbjct: 597 RRGMR 601
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 136/319 (42%), Gaps = 35/319 (10%)
Query: 107 WFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGA-TEGAYDVI 165
W L +N +AKE I E + + + F +++ AC +GA EG
Sbjct: 238 WAAMIKGLAQNGLAKEAI---ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHA 294
Query: 166 CELRTRGCLVSVHAWNNFLSHL-VEVNDIDRFWR---LYKGMGSFGHVE--NVNTFNLAI 219
C +RT NF H+ V ID + + L+ F ++ NV ++ +
Sbjct: 295 CIIRT-----------NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMV 343
Query: 220 YALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGN 279
+ R EA+ + M + G P+ + I SL+ + K +T
Sbjct: 344 VGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA--ITSG 401
Query: 280 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR---TYATLIDGYARWGSL 336
+ +VS NS++ + K G + + + +M +VR ++ ++ YA++G
Sbjct: 402 LIHYVTVS-NSLVTLYGKCGDIDDSTRLFNEM-------NVRDAVSWTAMVSAYAQFGRA 453
Query: 337 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH-ICPDQYSYAI 395
E+++L D+MV+ GL P+ V ++ R G +E+ + M ++ I P Y+
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSC 513
Query: 396 LTEGLCRNGYLTEALKLHN 414
+ + R+G L EA++ N
Sbjct: 514 MIDLFSRSGRLEEAMRFIN 532
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 150/336 (44%), Gaps = 17/336 (5%)
Query: 274 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 333
NL++ + + P+ ++N I + ++GFE TLI YA+
Sbjct: 71 NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKL 130
Query: 334 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 393
G+L + R+ DEM +R ++ V+N+++ R GDM+ A ++ M K++ S+
Sbjct: 131 GALCCARRVFDEMSKR----DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT----SW 182
Query: 394 AILTEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMI 452
+ G +NG +EALK+ + K ++ + ++ +L G
Sbjct: 183 TTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAR 242
Query: 453 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 512
G ++Y I+ K G + A RL+ ++ Q NL +NS I L D
Sbjct: 243 ENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE---ELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 513 VAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL-GLSANRVTYNTL 570
A L + LR+ + DA TF L+ + G + + L M+ + +S Y +
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 571 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
I+LL + G +EA +L+K M M +PD + + TL+
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPM---KPDAVVWGTLL 392
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKNL 517
+V + TVI G + GN +AL+++ M K +PN S + + ++ + L
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 518 VDELRKRKLLDATTF-NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
R+ D N I YS G ID A L E LG N ++N++I L
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEE---LGNQRNLCSWNSMIGSLAT 294
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 629
+G +EA L M+ +G +PD +T+ L+ + +H M++KG
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLL-----------LACVHGGMVVKG 336
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 129/645 (20%), Positives = 243/645 (37%), Gaps = 92/645 (14%)
Query: 51 LEQLSPKLTTFMVNRVVSEFHNSPHLALDFYNWVGML--FPHSLHSSCTLLQVLVNSRWF 108
L L +LT V V+S L F++W F H+ + + ++L ++
Sbjct: 103 LSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGFHHTRATFHAIFKILRGAKLV 162
Query: 109 TEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICEL 168
T LM + + + ++ ES +H + DALV G T+ A +
Sbjct: 163 T----LMIDFLDR----------SVGFESCRHSLRLCDALVVGYAVAGRTDIALQHFGNM 208
Query: 169 RTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRV 228
R RG + ++ L+ LVE D F ++ + G V V T ++ + CK+ ++
Sbjct: 209 RFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAV-THSILVKKFCKQGKL 267
Query: 229 VEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKM------NLMTGNSVW 282
EA + +L + +++D C A K++ ++ N+ ++W
Sbjct: 268 DEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIW 327
Query: 283 PNSV---------------------------SYNSIINGFCKKGGLLLAEEVLGDMVKAG 315
++ YNS++ K+ L ++L +M+ G
Sbjct: 328 IRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRG 387
Query: 316 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 375
P+ +T + + + G ++E+L L E G P + YN +++ L + +E+A
Sbjct: 388 VSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAY 447
Query: 376 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL-------------- 421
VL ID+ +++ LT LC G A +L + DL
Sbjct: 448 DVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISAL 507
Query: 422 -----IEDAFSLNILLNYI-CKSXXXXXXXXXXGS---------------MITRGLPPDV 460
+EDA +N L N + GS M +G P
Sbjct: 508 CDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTR 567
Query: 461 YTKATVIDGNCKLGNTEKALRLYNGMIKMD---EQPNLTIYNSFINGLCKMASTDVAKNL 517
VI C++ + EK + ++K + + YN FI G +A+ +
Sbjct: 568 SLYRNVIQCVCEMESGEK--NFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLV 625
Query: 518 VDELRKRKLLDATTFNTL-ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
D + + + N L + Y + +I +A +++ G + R+ Y +I LCK
Sbjct: 626 YDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCK 684
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 621
++A ++ M +G++P Y I + +E + L
Sbjct: 685 ANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGL 729
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 129/328 (39%), Gaps = 8/328 (2%)
Query: 114 LMRNLIAKEGI-APLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRG 172
L+ L A E + ++L+ +D + F L A G + A +++ R
Sbjct: 433 LIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERD 492
Query: 173 CLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAI 232
L A +S L +V ++ + + G + F IY R A
Sbjct: 493 LLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAA 552
Query: 233 TVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL-KVMKKMNLMTGNSVWPNSV-SYNS 290
+I RM + G P + +I C+ S + + K L S+W + V +YN
Sbjct: 553 KLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQL----SLWEHKVQAYNL 608
Query: 291 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 350
I G G LA V M + G P+V + ++ Y + + ++L ++ E+G
Sbjct: 609 FIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG 668
Query: 351 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 410
+Y ++ L + +++A L +M + + P Y + + LC EA+
Sbjct: 669 KTKK-RLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAV 727
Query: 411 KLHNQILKFDLIEDAFSLNILLNYICKS 438
L N+ K AF N+LL+ KS
Sbjct: 728 GLVNEFRKSGRRITAFIGNVLLHNAMKS 755
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 149/397 (37%), Gaps = 49/397 (12%)
Query: 251 NMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 310
+ ++ G G D+AL+ M + +S Y+ ++N ++ + +
Sbjct: 186 DALVVGYAVAGRTDIALQHFGNMRF---RGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQ 242
Query: 311 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV-----YNSILYWL 365
+ GF +V T++ L+ + + G L+E+ E R L PN ++ L
Sbjct: 243 ISVRGFVCAV-THSILVKKFCKQGKLDEA-----EDYLRALLPNDPAGCGSGLGILVDAL 296
Query: 366 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE-D 424
+EA+K+L ++ +Y I L + G+L +I + E +
Sbjct: 297 CSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELE 356
Query: 425 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 484
F N ++ + K M+ RG+ P+ T + CK G ++AL LY
Sbjct: 357 VFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYR 416
Query: 485 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQ 544
++ P YN I+ LC S + A +++ G
Sbjct: 417 SRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVL-----------------------KGA 453
Query: 545 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 604
ID L + T++TL N LC G + A+EL+ + + P I
Sbjct: 454 IDRGHFLGGK-----------TFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCK 502
Query: 605 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
+I+ E+ + +++ GV K + +++
Sbjct: 503 IISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLI 539
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 118/526 (22%), Positives = 213/526 (40%), Gaps = 98/526 (18%)
Query: 190 VNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVS 249
V DI +Y+ +G +V N + K R++EA + +L+ P+ S
Sbjct: 120 VGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILR----PSSTS 175
Query: 250 FNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGF-------------- 295
+N +I G CK G +D A+ + +M PN VS+N +I+GF
Sbjct: 176 WNTLISGYCKAGLMDEAVTLFHRMP-------QPNVVSWNCLISGFVDKGSPRALEFLVR 228
Query: 296 -------------------CKKGGLL-LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
C GGLL + +++ +VK+G E S + LID Y+ GS
Sbjct: 229 MQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGS 288
Query: 336 LEESLRLCDEMVERGLFPN--IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 393
L + D + L N + V+NS+L + + E A +L + +C D Y+
Sbjct: 289 L---IYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTL 345
Query: 394 AILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 453
+ + +C N Y+ L L L ++ + L+ ++ I +
Sbjct: 346 SGALK-ICIN-YVNLRLGLQVHSL---VVVSGYELDYIVGSILVDLHANVGNIQDAHKLF 400
Query: 454 RGLP-PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF----------- 501
LP D+ + +I G K G A L+ +IK+ + I ++
Sbjct: 401 HRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLG 460
Query: 502 ----INGLC--------------------KMASTDVAKNLVDELRKRKLLDATTFNTLIS 537
I+GLC K D L D + +R D ++ +I
Sbjct: 461 WGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLER---DVVSWTGIIV 517
Query: 538 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ-GIR 596
G+ +G+++EAF +M ++G+ N+VT+ L++ +G EEA+ ++ M + G+
Sbjct: 518 GFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLE 577
Query: 597 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
P Y ++ + +E L + M L+ PD+ + +++T
Sbjct: 578 PYLEHYYCVVDLLGQAGLFQEANELINKMPLE---PDKTIWTSLLT 620
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 158/360 (43%), Gaps = 16/360 (4%)
Query: 284 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 343
+++S+ S+++G+ + A EV +MV G + + T ++ + + G +
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 344 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 403
++ G N + +++ Y + + +A +V +M + PD + + +N
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE----PDVICWTAVLSAFSKN 242
Query: 404 GYLTEALKLHNQILKFD-LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 462
EAL L + + L+ D + +L G +IT G+ +V
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 463 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 522
+++++D K G+ +A +++NGM K N +++ + G C+ + A + E+
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMSK----KNSVSWSALLGGYCQNGEHEKAIEIFREME 358
Query: 523 KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 582
++ D F T++ + + + + G N + + LI+L K+GC +
Sbjct: 359 EK---DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDS 415
Query: 583 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 642
A + M ++ + IT+ +++ + EE ++ + M+ KG+ PD ++ AI+T
Sbjct: 416 ASRVYSKMSIRNM----ITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILT 471
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 108/234 (46%), Gaps = 46/234 (19%)
Query: 196 FWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIID 255
F+ +++G G V + +TF + A R+ + + +++ +G NVV + ++D
Sbjct: 252 FYAMHRGKGL---VPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLD 308
Query: 256 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG---------------- 299
K GS+ A +V M+ NSVS+++++ G+C+ G
Sbjct: 309 MYGKCGSVREARQVFNGMSK-------KNSVSWSALLGGYCQNGEHEKAIEIFREMEEKD 361
Query: 300 ---------------GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD 344
+ L +E+ G V+ G +V + LID Y + G ++ + R+
Sbjct: 362 LYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYS 421
Query: 345 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY-AILT 397
+M R N++ +N++L L ++G EEA +DM+ K I PD S+ AILT
Sbjct: 422 KMSIR----NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILT 471
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 157/354 (44%), Gaps = 51/354 (14%)
Query: 237 RMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFC 296
R+ + P+V+ + ++ K + AL + M+ G + P+ ++ +++
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH--RGKGLVPDGSTFGTVLTACG 276
Query: 297 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 356
L +E+ G ++ G +V ++L+D Y + GS+ E+ ++ + M ++ N V
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK----NSV 332
Query: 357 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 416
++++L ++G+ E+A ++ +M +K D Y + + + C A++L +I
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKA-CAG---LAAVRLGKEI 384
Query: 417 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 476
G + RG +V ++ +ID K G
Sbjct: 385 -------------------------------HGQYVRRGCFGNVIVESALIDLYGKSGCI 413
Query: 477 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTL 535
+ A R+Y+ M N+ +N+ ++ L + + A + +++ K+ + D +F +
Sbjct: 414 DSASRVYSKM----SIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAI 469
Query: 536 ISGYSNSGQIDEAFGLTTEM-KSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
++ ++G +DE M KS G+ Y+ +I+LL + G EEA+ L++
Sbjct: 470 LTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 149/349 (42%), Gaps = 15/349 (4%)
Query: 280 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 339
S+ ++ + S I CK G L A +L + + + YA+L+ + S
Sbjct: 21 SISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHG 80
Query: 340 LRLCDEMVERGLFPNIVVYNSILYWLYRHG-DMEEASKVLSDMIDKHICPDQYSYAILTE 398
++ +V+ GL + V NS+L ++ G M E +V D D S+ +
Sbjct: 81 IQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVF----DGRFVKDAISWTSMMS 136
Query: 399 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 458
G +AL++ +++ F L + F+L+ + + G +IT G
Sbjct: 137 GYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEW 196
Query: 459 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 518
+ + +T+ A R+++ M +P++ + + ++ K + A L
Sbjct: 197 NHFISSTLAYLYGVNREPVDARRVFDEM----PEPDVICWTAVLSAFSKNDLYEEALGLF 252
Query: 519 DELRKRKLL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 576
+ + K L D +TF T+++ N ++ + + ++ + G+ +N V ++L+++ K
Sbjct: 253 YAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGK 312
Query: 577 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 625
G EA+++ M + + ++++ L+ + + E+ I + M
Sbjct: 313 CGSVREARQVFNGM----SKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 188/447 (42%), Gaps = 33/447 (7%)
Query: 209 VENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGAC---KTGSLDL 265
+ +N NL + + C + Y + PN N +I + + +
Sbjct: 40 ITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSI 99
Query: 266 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 325
A+ V +K+ + P++ ++ ++ + + ++ G +V GF+ SV
Sbjct: 100 AITVYRKLWALCAK---PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTG 156
Query: 326 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 385
LI Y G L ++ ++ DEM L ++ V+N++L + G+M+EA +L M
Sbjct: 157 LIQMYFSCGGLGDARKMFDEM----LVKDVNVWNALLAGYGKVGEMDEARSLLEMM--PC 210
Query: 386 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 445
++ S+ + G ++G +EA+++ ++L ++ D +L +L+
Sbjct: 211 WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 446 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 505
+ RG+ V VID K GN KAL ++ + + N+ + + I GL
Sbjct: 271 RICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV----NERNVVTWTTIIAGL 326
Query: 506 CKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKS-LGLSAN 563
A + + + K + + TF ++S S+ G +D L M+S G+ N
Sbjct: 327 ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Query: 564 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE------- 616
Y +I+LL + G EA E++K M + + + +L+ N H E
Sbjct: 387 IEHYGCMIDLLGRAGKLREADEVIKSM---PFKANAAIWGSLLAASNVHHDLELGERALS 443
Query: 617 EVIALH-----DYMILKGVIPDQKTYD 638
E+I L +YM+L + + +D
Sbjct: 444 ELIKLEPNNSGNYMLLANLYSNLGRWD 470
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 149/327 (45%), Gaps = 17/327 (5%)
Query: 237 RMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVW-PNSVSYNSIINGF 295
+M + +V +N ++ G K G +D A +++ M W N VS+ +I+G+
Sbjct: 172 KMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMM------PCWVRNEVSWTCVISGY 225
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
K G A EV M+ EP T ++ A GSLE R+C + RG+ +
Sbjct: 226 AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAV 285
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
+ N+++ + G++ +A V + ++++ ++ + GL +G+ EAL + N+
Sbjct: 286 SLNNAVIDMYAKSGNITKALDVFECVNERNVV----TWTTIIAGLATHGHGAEALAMFNR 341
Query: 416 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLG 474
++K + + + +L+ SM ++ G+ P++ +ID LG
Sbjct: 342 MVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMID---LLG 398
Query: 475 NTEKALRLYNGMIK-MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFN 533
K LR + +IK M + N I+ S + ++ + + EL K + ++ +
Sbjct: 399 RAGK-LREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYM 457
Query: 534 TLISGYSNSGQIDEAFGLTTEMKSLGL 560
L + YSN G+ DE+ + MK +G+
Sbjct: 458 LLANLYSNLGRWDESRMMRNMMKGIGV 484
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 12/235 (5%)
Query: 177 VHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIY 236
V+ WN L+ +V ++D L + M + V N ++ I K R EAI V
Sbjct: 182 VNVWNALLAGYGKVGEMDEARSLLEMMPCW--VRNEVSWTCVISGYAKSGRASEAIEVFQ 239
Query: 237 RMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY-NSIINGF 295
RML + P+ V+ ++ GSL+L ++ ++ N +VS N++I+ +
Sbjct: 240 RMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMN----RAVSLNNAVIDMY 295
Query: 296 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 355
K G + A +V + E +V T+ T+I G A G E+L + + MV+ G+ PN
Sbjct: 296 AKSGNITKALDVF----ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPND 351
Query: 356 VVYNSILYWLYRHGDMEEASKVLSDMIDKH-ICPDQYSYAILTEGLCRNGYLTEA 409
V + +IL G ++ ++ + M K+ I P+ Y + + L R G L EA
Sbjct: 352 VTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 13/265 (4%)
Query: 120 AKEGIA--PLELLEALMDESYQHCPAVFDALVRACTQVGATEGAYDVICELRTRGCLVSV 177
AK G A +E+ + ++ E+ + A++ AC +G+ E + + RG +V
Sbjct: 226 AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAV 285
Query: 178 HAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTFNLAIYALCKECRVVEAITVIYR 237
N + + +I + +++ + NV T+ I L EA+ + R
Sbjct: 286 SLNNAVIDMYAKSGNITKALDVFECVNE----RNVVTWTTIIAGLATHGHGAEALAMFNR 341
Query: 238 MLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 297
M+K G PN V+F I+ G +DL ++ M G + PN Y +I+ +
Sbjct: 342 MVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG--IHPNIEHYGCMIDLLGR 399
Query: 298 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 357
G L A+EV+ M F+ + + +L+ LE R E+++ L PN
Sbjct: 400 AGKLREADEVIKSM---PFKANAAIWGSLLAASNVHHDLELGERALSELIK--LEPNNSG 454
Query: 358 YNSILYWLYRHGDMEEASKVLSDMI 382
+L LY + + S+++ +M+
Sbjct: 455 NYMLLANLYSNLGRWDESRMMRNMM 479
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 151/324 (46%), Gaps = 13/324 (4%)
Query: 286 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 345
VSYN+II G+ + G A ++ +M +P T ++++ ++ + + + +
Sbjct: 208 VSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGY 267
Query: 346 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 405
++ +G+ ++ + +S++ + +E++ +V S + C D S+ L G +NG
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL----YCRDGISWNSLVAGYVQNGR 323
Query: 406 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 465
EAL+L Q++ + A + + ++ G ++ G +++ +
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 383
Query: 466 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 525
++D K GN + A ++++ M +DE + + I G A +L +E++++
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDE----VSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 526 LL-DATTFNTLISGYSNSGQIDEAFGLTTEM-KSLGLSANRVTYNTLINLLCKNGCDEEA 583
+ + F +++ S+ G +DEA+G M K GL+ Y + +LL + G EEA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 584 KELMKMMIMQGIRPDCITYTTLIT 607
+ M ++ P ++TL++
Sbjct: 500 YNFISKMCVE---PTGSVWSTLLS 520
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 159/374 (42%), Gaps = 24/374 (6%)
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR--- 332
M + P+ + S++ L E V G +V+ G + + T L++ YA+
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLG 155
Query: 333 WGSLEESLRLCDEMVER---GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 389
GS + DEM +R ++ I+ + ++ +V M K D
Sbjct: 156 MGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF-----GIDSVRRVFEVMPRK----D 206
Query: 390 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 449
SY + G ++G +AL++ ++ DL D+F+L+ +L + G
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266
Query: 450 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 509
+I +G+ DVY ++++D K E + R+++ + D +NS + G +
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG----ISWNSLVAGYVQNG 322
Query: 510 STDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 568
+ A L ++ K+ A F+++I ++ + L + G +N +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 569 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 628
L+++ K G + A+++ M + D +++T +I H E ++L + M +
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVL----DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 629 GVIPDQKTYDAIVT 642
GV P+Q + A++T
Sbjct: 439 GVKPNQVAFVAVLT 452
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/341 (19%), Positives = 147/341 (43%), Gaps = 56/341 (16%)
Query: 224 KECRVVEAITVIYRML-KDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVW 282
K R+ ++ V R+ +DG +S+N ++ G + G + AL++ ++M V
Sbjct: 289 KSARIEDSERVFSRLYCRDG-----ISWNSLVAGYVQNGRYNEALRLFRQM---VTAKVK 340
Query: 283 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 342
P +V+++S+I L L +++ G +++ GF ++ + L+D Y++ G+++ + ++
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 343 CDEMVERGLFPNI---VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 399
D M N+ V + +I+ HG EA + +M + + P+Q ++ +
Sbjct: 401 FDRM-------NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA 453
Query: 400 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 459
G + EA N + K GL +
Sbjct: 454 CSHVGLVDEAWGYFNSMTK----------------------------------VYGLNQE 479
Query: 460 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 519
+ A V D + G E+A YN + KM +P +++++ ++ + ++A+ + +
Sbjct: 480 LEHYAAVADLLGRAGKLEEA---YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536
Query: 520 ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 560
++ + + + + Y+++G+ E L M+ GL
Sbjct: 537 KIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 208/505 (41%), Gaps = 74/505 (14%)
Query: 148 LVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFG 207
L+ A ++ G+ E V ++ R +++ WN+ ++ L ++ +D L++ M
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQR----NIYTWNSVVTGLTKLGFLDEADSLFRSMPE-- 114
Query: 208 HVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLAL 267
+ T+N + + R EA+ M K+G N SF ++ AC L
Sbjct: 115 --RDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL-SACS------GL 165
Query: 268 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 327
M K V +S+I K+ F V + L+
Sbjct: 166 NDMNK------------GVQVHSLI-------------------AKSPFLSDVYIGSALV 194
Query: 328 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 387
D Y++ G++ ++ R+ DEM +R N+V +NS++ ++G EA V M++ +
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDR----NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 388 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFD-LIEDAFSLNILLNYICKSXXXXXXXX 446
PD+ + A + + ++H +++K D L D N ++ K
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 447 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 506
SM R +V + ++I G +T KA RL KM E+ N+ +N+ I G
Sbjct: 311 IFDSMPIR----NVIAETSMISGYAMAAST-KAARLM--FTKMAER-NVVSWNALIAGYT 362
Query: 507 KMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSL------- 558
+ + A +L L++ + +F ++ ++ ++ G+ + L
Sbjct: 363 QNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELH--LGMQAHVHVLKHGFKFQ 420
Query: 559 -GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 617
G + N+LI++ K GC EE + + M+ + DC+++ +I F + + E
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER----DCVSWNAMIIGFAQNGYGNE 476
Query: 618 VIALHDYMILKGVIPDQKTYDAIVT 642
+ L M+ G PD T +++
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLS 501
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 97/469 (20%), Positives = 198/469 (42%), Gaps = 60/469 (12%)
Query: 145 FDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMG 204
F +++ AC+ + V + L V+ + + + +++ R++ MG
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 205 SFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLD 264
NV ++N I + VEA+ V ML+ P+ V+ +I AC + S
Sbjct: 215 D----RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI-SACASLS-- 267
Query: 265 LALKVMKKMN--LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP--SV 320
A+KV ++++ ++ + + + + N+ ++ + K + A + M P +V
Sbjct: 268 -AIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM------PIRNV 320
Query: 321 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 380
++I GYA S + + + +M ER N+V +N+++ ++G+ EEA +
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAER----NVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 381 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 440
+ + +CP YS+A + + L ++ H +LK
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKH--------------------- 415
Query: 441 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 500
G G D++ ++ID K G E+ ++ M++ D +N+
Sbjct: 416 --------GFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD----CVSWNA 463
Query: 501 FINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM-KSL 558
I G + + A L E L + D T ++S ++G ++E + M +
Sbjct: 464 MIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDF 523
Query: 559 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 607
G++ R Y +++LL + G EEAK +++ M MQ PD + + +L+
Sbjct: 524 GVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ---PDSVIWGSLLA 569
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 139/312 (44%), Gaps = 32/312 (10%)
Query: 307 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 366
V ++K+GF + LID Y++ GSLE+ ++ D+M +R NI +NS++ L
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR----NIYTWNSVVTGLT 97
Query: 367 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 426
+ G ++EA + M ++ DQ ++ + G ++ EAL + K + + +
Sbjct: 98 KLGFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEY 153
Query: 427 SLNILLNYICKSXXXXXXXXXXGSMITRG-LPPDVYTKATVIDGNCKLGNTEKALRLYNG 485
S +L+ C S+I + DVY + ++D K GN A R+++
Sbjct: 154 SFASVLS-ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 486 MIKMDEQPNLTIYNSFI-----NGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYS 540
M N+ +NS I NG + + DV + + L R D T ++IS +
Sbjct: 213 M----GDRNVVSWNSLITCFEQNGPA-VEALDVFQMM---LESRVEPDEVTLASVISACA 264
Query: 541 NSGQI---DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 597
+ I E G +K+ L + + N +++ K +EA+ + M ++ +
Sbjct: 265 SLSAIKVGQEVHGRV--VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV-- 320
Query: 598 DCITYTTLITHF 609
I T++I+ +
Sbjct: 321 --IAETSMISGY 330
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 119/273 (43%), Gaps = 3/273 (1%)
Query: 143 AVFDALVRACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKG 202
+++ + + + G A +V+ E++ +G S ++ + E ++ +L+K
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 203 MGSFGHVENVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGS 262
G +++ + +E + + V+ M K I++G K
Sbjct: 309 AGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG 368
Query: 263 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 322
A+KV + V+Y IN +C+ AE + +MVK GF+ V
Sbjct: 369 FAEAVKVYE---WAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVA 425
Query: 323 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 382
Y+ ++D Y + L +++RL +M +RG PNI +YNS++ R D+ A K+ +M
Sbjct: 426 YSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMK 485
Query: 383 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 415
+ PD+ SY + R+ L ++L+ +
Sbjct: 486 RAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 133/320 (41%), Gaps = 1/320 (0%)
Query: 288 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
Y + + K G A EVL +M G S Y+ LI +A + + +L E
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+ L + + ++ R G+ME +V++ M + + G +
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFA 370
Query: 408 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 467
EA+K++ +K + + I +N C+ M+ +G V + ++
Sbjct: 371 EAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 468 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 527
D K A+RL M + +PN+ IYNS I+ + A+ + E+++ K+L
Sbjct: 431 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVL 490
Query: 528 -DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 586
D ++ ++IS Y+ S +++ L E + +R ++ + K +E L
Sbjct: 491 PDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRL 550
Query: 587 MKMMIMQGIRPDCITYTTLI 606
++ M ++G R D Y++ +
Sbjct: 551 LQDMKVEGTRLDARLYSSAL 570
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 140/324 (43%), Gaps = 8/324 (2%)
Query: 315 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF----PNIVVYNSILYWLYRHGD 370
G EPS Y +++ + + G + + L E + L + +Y + L + G
Sbjct: 204 GVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGR 263
Query: 371 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA-FSLN 429
EA +VL +M DK I Y++L + KL + L++D L
Sbjct: 264 AFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLK 323
Query: 430 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 489
++L Y+ + +M L +++G K +A+++Y +K
Sbjct: 324 VVLMYV-REGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKE 382
Query: 490 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD-ATTFNTLISGYSNSGQIDEA 548
+ + Y IN C++ + A+ L DE+ K+ ++ ++ Y + ++ +A
Sbjct: 383 ECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDA 442
Query: 549 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 608
L +MK G N YN+LI++ + A+++ K M + PD ++YT++I+
Sbjct: 443 VRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISA 502
Query: 609 FNKKHHPEEVIALH-DYMILKGVI 631
+N+ E + L+ ++ + +G I
Sbjct: 503 YNRSKELERCVELYQEFRMNRGKI 526
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 164/387 (42%), Gaps = 22/387 (5%)
Query: 246 NVVSFNMIIDGACKTGSLDLALKVMKKMNLMTGNSVWP-NSVSYNSIINGFCKKGGLLLA 304
++ S+N+++ C G +DLA + K+ M + + ++ +Y +II F A
Sbjct: 334 DMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWA 393
Query: 305 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 364
+V DM G P+ T+++LI A G +E++ L +EM+ G PN +N +L+
Sbjct: 394 LKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHA 453
Query: 365 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG-------LCRNGYLTEALKLHNQIL 417
+ A ++ + Y+ I+++G L NG + + N
Sbjct: 454 CVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPY 513
Query: 418 -----KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 472
+F + NILL C + M + GL P+ T +T+ID
Sbjct: 514 IQASKRFCFKPTTATYNILLK-ACGT-DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGG 571
Query: 473 LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATT 531
G+ E A+R+ M +P++ Y + I + +A +L +E+R+ ++ + T
Sbjct: 572 SGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVT 631
Query: 532 FNTLISGYSNSG---QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 588
+NTL+ S G ++ + + +M++ G N LI C+ E + K
Sbjct: 632 YNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGVIQENGQSQDK 691
Query: 589 MMIMQGI---RPDCITYTTLITHFNKK 612
+ +G RP + + TH ++
Sbjct: 692 ISDQEGDNAGRPVSLLIEKVATHMQER 718
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 168/404 (41%), Gaps = 58/404 (14%)
Query: 291 IINGFCKKGGL---LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 347
II+GF KKG + + A E ++ P++ T+ID G +S + ++++
Sbjct: 238 IIHGFGKKGDMVSVMTAYEACKQILDT---PNMYICRTMIDVCGLCGDYVKSRYIYEDLL 294
Query: 348 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 407
+ + PNI V NS++ D+ KV +M + D SY IL + C G +
Sbjct: 295 KENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVD 352
Query: 408 EALKLHNQILKFD----LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 463
A ++ + + + L DAF+ ++ + M + G+ P+ +T
Sbjct: 353 LAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTW 412
Query: 464 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD----------- 512
+++I G E+A L+ M+ +PN +N ++ + D
Sbjct: 413 SSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKG 472
Query: 513 -------VAKNLVDELRKRK--LLDATTFNTLISGYSNSGQIDEA----FGLTT------ 553
A ++V + R +L +L++ SNS I + F TT
Sbjct: 473 SSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNIL 532
Query: 554 ----------------EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 597
EMKSLGLS N++T++TLI++ +G E A +++ M G RP
Sbjct: 533 LKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRP 592
Query: 598 DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 641
D + YTT I + + +L + M + P+ TY+ ++
Sbjct: 593 DVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLL 636
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 130/313 (41%), Gaps = 43/313 (13%)
Query: 96 CTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVRACTQV 155
CT+++V +++ + AL + ++ + G+ P H + +L+ AC
Sbjct: 378 CTIIKVFADAKMWKWALKV-KDDMKSVGVTP-----------NTH---TWSSLISACANA 422
Query: 156 GATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVENVNTF 215
G E A + E+ GC + +N L VE DR +RL++ ++
Sbjct: 423 GLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKG-------SSV 475
Query: 216 NLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMKKMNL 275
N ++YA + V + T +LK+ ++V+ N S ++ K+
Sbjct: 476 NESLYA---DDIVSKGRTSSPNILKNNGPGSLVNRN----------SNSPYIQASKRFCF 522
Query: 276 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 335
P + +YN ++ C +E++ +M G P+ T++TLID G
Sbjct: 523 K------PTTATYNILLKA-CGTD-YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGD 574
Query: 336 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 395
+E ++R+ M G P++V Y + + + ++ A + +M I P+ +Y
Sbjct: 575 VEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNT 634
Query: 396 LTEGLCRNGYLTE 408
L + + G L E
Sbjct: 635 LLKARSKYGSLLE 647
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 159/362 (43%), Gaps = 49/362 (13%)
Query: 212 VNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVMK 271
+ +F+ IYAL K ++I V RM G P+ + ++ K + A KV K
Sbjct: 81 IYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD----SHVLPNLFKVCAELSAFKVGK 136
Query: 272 KMNLMTGNSVWP-NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
+++ ++ S ++ S+ + + + G + A +V M + V T + L+ Y
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS----DKDVVTCSALLCAY 192
Query: 331 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 390
AR G LEE +R+ EM G+ NIV +N IL R G +EA + + CPDQ
Sbjct: 193 ARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252
Query: 391 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 450
+ + + + + L +H ++K L++D ++ ++
Sbjct: 253 VTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI------------------ 294
Query: 451 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 510
D+Y K+ G+ + L+N M+ + N++I GL +
Sbjct: 295 --------DMYGKS---------GHVYGIISLFNQFEMMEA----GVCNAYITGLSRNGL 333
Query: 511 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 569
D A + + +++ + L+ ++ ++I+G + +G+ EA L EM+ G+ N VT +
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 570 LI 571
++
Sbjct: 394 ML 395
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 99/520 (19%), Positives = 218/520 (41%), Gaps = 39/520 (7%)
Query: 91 SLHSSCTLLQVLVNSRWFTEALSLMRNLIAKEGIAPLELLEALMDESYQHCPAVFDALVR 150
+++S +L+ L ++ FT+++ + + + L+ +S+ V L +
Sbjct: 80 TIYSFSSLIYALTKAKLFTQSIGVFSRMFS----------HGLIPDSH-----VLPNLFK 124
Query: 151 ACTQVGATEGAYDVICELRTRGCLVSVHAWNNFLSHLVEVNDIDRFWRLYKGMGSFGHVE 210
C ++ A + + C G + + + + +++ M +
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD----K 180
Query: 211 NVNTFNLAIYALCKECRVVEAITVIYRMLKDGTFPNVVSFNMIIDGACKTGSLDLALKVM 270
+V T + + A ++ + E + ++ M G N+VS+N I+ G ++G A+ +
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 271 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 330
+K++ + P+ V+ +S++ L + + G ++K G + +ID Y
Sbjct: 241 QKIHHL---GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMY 297
Query: 331 ARWGSLEESLRLCD--EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 388
+ G + + L + EM+E G V N+ + L R+G +++A ++ ++ +
Sbjct: 298 GKSGHVYGIISLFNQFEMMEAG------VCNAYITGLSRNGLVDKALEMFELFKEQTMEL 351
Query: 389 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 448
+ S+ + G +NG EAL+L ++ + + ++ +L
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTH 411
Query: 449 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 508
G + L +V+ + +ID K G + ++N M NL +NS +NG
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM----PTKNLVCWNSLMNGFSMH 467
Query: 509 ASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEM-KSLGLSANRVT 566
++ + L + +L D +F +L+S G DE + M + G+
Sbjct: 468 GKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEH 527
Query: 567 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 606
Y+ ++NLL + G +EA +L+K M + PD + L+
Sbjct: 528 YSCMVNLLGRAGKLQEAYDLIKEMPFE---PDSCVWGALL 564