Miyakogusa Predicted Gene
- Lj4g3v0151610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0151610.1 Non Chatacterized Hit- tr|I1PD89|I1PD89_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,23.08,1e-18,seg,NULL; PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; HCP-like,NULL,CUFF.46539.1
(409 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 3e-99
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 3e-55
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 206 2e-53
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 195 4e-50
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 4e-49
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 191 5e-49
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 8e-49
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 1e-48
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 8e-48
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 2e-47
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 2e-47
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 4e-47
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 3e-46
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 6e-46
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 1e-45
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 179 3e-45
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 6e-45
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 3e-44
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 6e-44
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 6e-44
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 175 6e-44
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 3e-43
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 3e-43
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 5e-43
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 7e-42
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 7e-41
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 9e-41
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 9e-41
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 163 2e-40
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 4e-40
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 5e-40
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 160 1e-39
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 159 4e-39
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 3e-38
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 4e-38
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 155 5e-38
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 154 1e-37
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 3e-37
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 1e-36
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 150 2e-36
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 3e-36
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 4e-34
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 9e-34
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 1e-33
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 1e-32
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 6e-30
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 128 6e-30
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 8e-30
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 126 3e-29
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 9e-29
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 9e-29
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 6e-28
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 120 2e-27
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 119 4e-27
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 119 4e-27
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 119 5e-27
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 115 7e-26
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 7e-25
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 108 8e-24
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 101 1e-21
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 100 3e-21
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 98 1e-20
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 96 6e-20
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 95 8e-20
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 93 3e-19
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 3e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 92 5e-19
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 90 3e-18
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 88 8e-18
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 8e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 88 9e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 87 1e-17
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 84 1e-16
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 84 2e-16
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 84 2e-16
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 84 2e-16
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 83 4e-16
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 81 1e-15
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 80 3e-15
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 80 4e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 78 1e-14
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 77 3e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 75 6e-14
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 2e-13
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 73 3e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 73 3e-13
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 72 5e-13
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 71 1e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 71 1e-12
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 70 2e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 70 2e-12
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 70 3e-12
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 68 1e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 67 2e-11
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 66 4e-11
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 63 3e-10
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 62 6e-10
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 61 1e-09
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 59 4e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 59 8e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 59 9e-09
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 58 1e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 56 4e-08
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 56 4e-08
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 53 4e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 52 9e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 52 1e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 50 4e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 358 bits (920), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/396 (45%), Positives = 261/396 (65%), Gaps = 5/396 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+++DGACKTG + AL+++ KM +M+GN V PN+V+YNS+INGFCK G L LAE + GDM
Sbjct: 258 MMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDM 317
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
VK+G + + RTY L+D Y R GS +E+LRLCDEM +GL N V+YNSI+YWL+ GD+
Sbjct: 318 VKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDI 377
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
E A VL DM K++ D+++ AI+ GLCRNGY+ EA++ QI + L+ED N L
Sbjct: 378 EGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTL 437
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+++ + GSM+ +GL D + T+IDG K G E+AL +Y+GMIKM++
Sbjct: 438 MHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNK 497
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL 313
NL IYNS +NGL K A+ +V+ + ++ D T+NTL++ +G ++EA +
Sbjct: 498 TSNLVIYNSIVNGLSKRGMAGAAEAVVNAM---EIKDIVTYNTLLNESLKTGNVEEADDI 554
Query: 314 TTEMKSLG--LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
++M+ S + VT+N +IN LCK G E+AKE++K M+ +G+ PD ITY TLIT F
Sbjct: 555 LSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
+K E+V+ LHDY+IL+GV P + Y +IV P L
Sbjct: 615 SKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 189/419 (45%), Gaps = 40/419 (9%)
Query: 25 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 84
+D KV K+M+ + N ++N +I FCK+ L A V M+K G P+V +
Sbjct: 199 IDRFWKVYKEMDSL---GYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVS 255
Query: 85 YATLIDGYARWGSLEESLRLCDEM-VERGLF--PNIVVYNSILYWLYRHGDMEEASKVLS 141
+ +IDG + G + +L+L +M + G F PN V YNS++ + G ++ A ++
Sbjct: 256 FNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRG 315
Query: 142 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 201
DM+ + ++ +Y L + R G EAL+L +++ L+ + N ++ ++
Sbjct: 316 DMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEG 375
Query: 202 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 261
M ++ + D +T+A V+ G C+ G ++A+ + + ++ +N
Sbjct: 376 DIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHN 435
Query: 262 SFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
+ ++ + A ++ + + L LDA +F TLI GY G+++ A + M +
Sbjct: 436 TLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKM 495
Query: 321 GLSANR-------------------------------VTYNTLINLLCKNGCDEEAKELM 349
++N VTYNTL+N K G EEA +++
Sbjct: 496 NKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDIL 555
Query: 350 KMMIMQGIRPDC--ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
M Q +T+ +I H K E+ + +M+ +GV+PD TY ++T F
Sbjct: 556 SKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 164/358 (45%), Gaps = 4/358 (1%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
++S++ + G A EV+ GF SV + ++ ++ EM
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
G N+ +N ++Y + + EA V M+ + P+ S+ ++ +G C+ G +
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 170 EALKLHNQ--ILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 226
AL+L + ++ + + +A + N ++N CK+ G M+ G+ + T
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
++D + G++++ALRL + M N IYNS + L + A +++ ++ +
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 287 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
+ +D T ++ G +G + EA ++ L + V +NTL++ ++ A
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 346 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+++ M++QG+ D I++ TLI + K+ E + ++D MI + Y++IV
Sbjct: 451 DQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIV 508
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 202/364 (55%), Gaps = 1/364 (0%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N SYN +I+ C+ G + A +L M G+ P V +Y+T+++GY R+G L++ +L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+ M +GL PN +Y SI+ L R + EA + S+MI + I PD Y L +G C+
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G + A K ++ D+ D + +++ C+ M +GL PD T
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+I+G CK G+ + A R++N MI+ PN+ Y + I+GLCK D A L+ E+ K
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 286 RKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
L + T+N++++G SG I+EA L E ++ GL+A+ VTY TL++ CK+G ++
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 345 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
A+E++K M+ +G++P +T+ L+ F E+ L ++M+ KG+ P+ T++++V
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 405 PFLL 408
+ +
Sbjct: 605 QYCI 608
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 198/390 (50%), Gaps = 39/390 (10%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+++G C+ G LD KV K + +M + PNS Y SII C+ L AEE +M+
Sbjct: 287 VVNGYCRFGELD---KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P Y TLIDG+ + G + + + EM R + P+++ Y +I+ + GDM
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA K+ +M K + PD ++ L G C+ G++ +A ++HN
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH----------------- 446
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
MI G P+V T T+IDG CK G+ + A L + M K+ Q
Sbjct: 447 ------------------MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PN+ YNS +NGLCK + + A LV E L D T+ TL+ Y SG++D+A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
EM GL VT+N L+N C +G E+ ++L+ M+ +GI P+ T+ +L+ +
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+++ + A++ M +GV PD KTY+ +V
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 107 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 166
E E G+ N+ YN +++++ + G ++EA +L M K PD SY+ + G CR G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 167 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 226
L + KL + + L +++ ++ +C+ MI +G+ PD
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
T+IDG CK G+ A + + M D P++ Y + I+G C++ A L E+ +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 287 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
L D+ TF LI+GY +G + +AF + M G S N VTY TLI+ LCK G + A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 346 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 405
EL+ M G++P+ TY +++ K + EE + L G+ D TY ++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 406 F 406
+
Sbjct: 536 Y 536
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 128/274 (46%), Gaps = 38/274 (13%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG CK G LD A +++ +M + + PN +YNSI+NG CK G + A +++G+
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKI---GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
AG TY TL+D Y + G ++++ + EM+ +GL P IV +N ++ HG +E
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+ K+L+ M+ K I P+ ++ L + C L A ++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK------------------ 620
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
M +RG+ PD T ++ G+CK N ++A L+ M
Sbjct: 621 -----------------DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
+++ Y+ I G K A+ + D++R+ L
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 35/292 (11%)
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE-ALKLHNQ 177
V++ L G + EA +V M++ + S + L ++ Y T A+ + +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 178 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 237
+ + + S NI+++++C+ M +G PDV + +TV++G C+ G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 238 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTL 297
+K +L M + +PN IY S I LC++ KL +A
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC---------------KLAEA------ 335
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 357
+EAF +EM G+ + V Y TLI+ CK G A + M + I
Sbjct: 336 ----------EEAF---SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 358 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
PD +TYT +I+ F + E L M KG+ PD T+ ++ + A
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 202/364 (55%), Gaps = 1/364 (0%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N SYN +I+ C+ G + A +L M G+ P V +Y+T+++GY R+G L++ +L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+ M +GL PN +Y SI+ L R + EA + S+MI + I PD Y L +G C+
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G + A K ++ D+ D + +++ C+ M +GL PD T
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+I+G CK G+ + A R++N MI+ PN+ Y + I+GLCK D A L+ E+ K
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 286 RKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
L + T+N++++G SG I+EA L E ++ GL+A+ VTY TL++ CK+G ++
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 345 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
A+E++K M+ +G++P +T+ L+ F E+ L ++M+ KG+ P+ T++++V
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 405 PFLL 408
+ +
Sbjct: 605 QYCI 608
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 198/390 (50%), Gaps = 39/390 (10%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+++G C+ G LD KV K + +M + PNS Y SII C+ L AEE +M+
Sbjct: 287 VVNGYCRFGELD---KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P Y TLIDG+ + G + + + EM R + P+++ Y +I+ + GDM
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA K+ +M K + PD ++ L G C+ G++ +A ++HN
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH----------------- 446
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
MI G P+V T T+IDG CK G+ + A L + M K+ Q
Sbjct: 447 ------------------MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PN+ YNS +NGLCK + + A LV E L D T+ TL+ Y SG++D+A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
EM GL VT+N L+N C +G E+ ++L+ M+ +GI P+ T+ +L+ +
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+++ + A++ M +GV PD KTY+ +V
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 107 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 166
E E G+ N+ YN +++++ + G ++EA +L M K PD SY+ + G CR G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 167 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 226
L + KL + + L +++ ++ +C+ MI +G+ PD
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
T+IDG CK G+ A + + M D P++ Y + I+G C++ A L E+ +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 287 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
L D+ TF LI+GY +G + +AF + M G S N VTY TLI+ LCK G + A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 346 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 405
EL+ M G++P+ TY +++ K + EE + L G+ D TY ++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 406 F 406
+
Sbjct: 536 Y 536
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 128/274 (46%), Gaps = 38/274 (13%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG CK G LD A +++ +M + + PN +YNSI+NG CK G + A +++G+
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKI---GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
AG TY TL+D Y + G ++++ + EM+ +GL P IV +N ++ HG +E
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+ K+L+ M+ K I P+ ++ L + C L A ++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK------------------ 620
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
M +RG+ PD T ++ G+CK N ++A L+ M
Sbjct: 621 -----------------DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
+++ Y+ I G K A+ + D++R+ L
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 35/292 (11%)
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE-ALKLHNQ 177
V++ L G + EA +V M++ + S + L ++ Y T A+ + +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 178 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 237
+ + + S NI+++++C+ M +G PDV + +TV++G C+ G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 238 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTL 297
+K +L M + +PN IY S I LC++ KL +A
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC---------------KLAEA------ 335
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 357
+EAF +EM G+ + V Y TLI+ CK G A + M + I
Sbjct: 336 ----------EEAF---SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 358 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
PD +TYT +I+ F + E L M KG+ PD T+ ++ + A
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 210/398 (52%), Gaps = 5/398 (1%)
Query: 8 GCIKEWVLLDGACKTG-SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 66
G + +LD ++ ++ A V K+M + V PN +YN +I GFC G + +A
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEM---LESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 67 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 126
+ M G P+V TY TLIDGY + +++ +L M +GL PN++ YN ++
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 127 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 186
L R G M+E S VL++M + D+ +Y L +G C+ G +AL +H ++L+ L
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 187 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 246
+ L++ +CK+ M RGL P+ T T++DG + G +A R+
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 247 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSG 305
M P++ YN+ ING C + A ++++++++ L D +++T++SG+ S
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 306 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 365
+DEA + EM G+ + +TY++LI C+ +EA +L + M+ G+ PD TYT
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 366 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
LI + + E+ + LH+ M+ KGV+PD TY ++
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 192/368 (52%), Gaps = 8/368 (2%)
Query: 6 SGGCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 61
+ GC+ V L+DG CK +D K+++ M L + PN +SYN +ING C++G
Sbjct: 233 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL---KGLEPNLISYNVVINGLCREG 289
Query: 62 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 121
+ VL +M + G+ TY TLI GY + G+ ++L + EM+ GL P+++ Y
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 122 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 181
S+++ + + G+M A + L M + +CP++ +Y L +G + GY+ EA ++ ++
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 182 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 241
+ N L+N C + M +GL PDV + +TV+ G C+ + ++A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 242 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISG 300
LR+ M++ +P+ Y+S I G C+ T A +L +E+ + L D T+ LI+
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 301 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 360
Y G +++A L EM G+ + VTY+ LIN L K EAK L+ + + P
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 361 CITYTTLI 368
+TY TLI
Sbjct: 590 DVTYHTLI 597
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 187/376 (49%), Gaps = 19/376 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G CK G+ AL VM L G + P+ ++Y S+I+ CK G + A E L M
Sbjct: 316 LIKGYCKEGNFHQAL-VMHAEMLRHG--LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G P+ RTY TL+DG+++ G + E+ R+ EM + G P++V YN+++ G ME
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A VL DM +K + PD SY+ + G CR+ + EAL++ ++++ + D + + L+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
C+ M+ GLPPD +T +I+ C G+ EKAL+L+N M++
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSN---------- 303
P++ Y+ INGL K + T AK L+ +L + + T++TLI SN
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 304 -----SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 358
G + EA + M + YN +I+ C+ G +A L K M+ G
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 359 PDCITYTTLITHFNKK 374
+T L+ +K+
Sbjct: 673 LHTVTVIALVKALHKE 688
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 172/356 (48%), Gaps = 37/356 (10%)
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG-DMEEASKVLSDMIDK 146
++ Y+R ++++L + G P ++ YN++L R ++ A V +M++
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 147 HICPDQYSYAILTEGLCRNGYLTEALKLHNQI-------------------LKFDLIEDA 187
+ P+ ++Y IL G C G + AL L +++ K I+D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 188 FSL----------------NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 231
F L N+++N +C+ M RG D T T+I G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 232 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-D 290
CK GN +AL ++ M++ P++ Y S I+ +CK + + A +D++R R L +
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 291 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 350
T+ TL+ G+S G ++EA+ + EM G S + VTYN LIN C G E+A +++
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 351 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
M +G+ PD ++Y+T+++ F + + +E + + M+ KG+ PD TY +++ F
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%)
Query: 52 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 111
S+I GFC KG + A++V M+ +P Y +I G+ R G + ++ L EMV+
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 112 GLFPNIVVYNSILYWLYRHGDMEEASKVL 140
G + V +++ L++ G + E + V+
Sbjct: 670 GFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 18/171 (10%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++ C G L+ AL++ N M V P+ V+Y+ +ING K+ A+ +L +
Sbjct: 526 LINAYCMEGDLEKALQLH---NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 75 KAGFEPSVRTYATLID---------------GYARWGSLEESLRLCDEMVERGLFPNIVV 119
PS TY TLI+ G+ G + E+ ++ + M+ + P+
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 120 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
YN +++ R GD+ +A + +M+ + L + L + G + E
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 198/375 (52%), Gaps = 3/375 (0%)
Query: 35 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 94
MN M G P +YN++ING CK G A+EV +M+++G P TY +L+ +
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 95 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 154
G + E+ ++ +M R + P++V ++S++ R G++++A + + + + PD
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 155 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
Y IL +G CR G ++ A+ L N++L+ D + N +L+ +CK M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
R L PD YT +IDG+CKLGN + A+ L+ M + + ++ YN+ ++G K+ D
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 275 VAKNL-VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 333
AK + D + K L +++ L++ + G + EAF + EM S + + N++I
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 334 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK--G 391
C++G + + ++ MI +G PDCI+Y TLI F ++ + + L M + G
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 392 VIPDQKTYDAIVTPF 406
++PD TY++I+ F
Sbjct: 653 LVPDVFTYNSILHGF 667
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 201/386 (52%), Gaps = 6/386 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL ACK G + KV M V P+ V ++S+++ F + G L A +
Sbjct: 346 LLMEACKKGDVVETEKVFSDMR---SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+AG P Y LI GY R G + ++ L +EM+++G ++V YN+IL+ L + +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA K+ ++M ++ + PD Y+ IL +G C+ G L A++L ++ + + D + N LL
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ K M+++ + P + + +++ C G+ +A R+++ MI + +
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P + I NS I G C+ + ++ ++++ + D ++NTLI G+ + +AFGL
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 314 TTEMKSL--GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+M+ GL + TYN++++ C+ +EA+ +++ MI +G+ PD TYT +I F
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQK 397
+ + E +HD M+ +G PD K
Sbjct: 703 VSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 182/381 (47%), Gaps = 4/381 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ + G ++LA V +++ + + V N + N ++N CK G + L +
Sbjct: 206 LIGSLVRIGWVELAWGVYQEI---SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P + TY TLI Y+ G +EE+ L + M +G P + YN+++ L +HG E
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A +V ++M+ + PD +Y L C+ G + E K+ + + D++ D + ++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +S S+ GL PD +I G C+ G A+ L N M++
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
++ YN+ ++GLCK A L +E+ +R L D+ T LI G+ G + A L
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+MK + + VTYNTL++ K G + AKE+ M+ + I P I+Y+ L+
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 374 KHHPEEVIALHDYMILKGVIP 394
K H E + D MI K + P
Sbjct: 563 KGHLAEAFRVWDEMISKNIKP 583
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 172/354 (48%), Gaps = 1/354 (0%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
N++I + G + LA V ++ ++G +V T +++ + G +E+ ++ E
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
+G++P+IV YN+++ G MEEA ++++ M K P Y+Y + GLC++G
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 230
A ++ ++L+ L D+ + LL CK M +R + PD+ ++++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 231 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE-LRKRKLL 289
+ GN +KAL +N + + P+ IY I G C+ VA NL +E L++ +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
D T+NT++ G + EA L EM L + T LI+ CK G + A EL
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 350 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ M + IR D +TY TL+ F K + + M+ K ++P +Y +V
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 159/362 (43%), Gaps = 1/362 (0%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N ++ +I + + L A E + GF S+ LI R G +E + +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
E+ G+ N+ N ++ L + G ME+ LS + +K + PD +Y L
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G + EA +L N + ++ N ++N +CK M+ GL PD T
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+++ CK G+ + ++++ M D P+L ++S ++ + + D A + +++
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 286 RKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
L+ D + LI GY G I A L EM G + + VTYNT+++ LCK E
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 345 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
A +L M + + PD T T LI K + + + L M K + D TY+ ++
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 405 PF 406
F
Sbjct: 524 GF 525
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L++ C G L A +V +M ++ P + NS+I G+C+ G E L M
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEM---ISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER--GLFPNIVVYNSILYWLYRHG 131
+ GF P +Y TLI G+ R ++ ++ L +M E GL P++ YNSIL+ R
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 180
M+EA VL MI++ + PD+ +Y + G LTEA ++H+++L+
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 9 CIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 68
CI L+ G + ++ A ++KKM G V P+ +YNSI++GFC++ + AE
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV-PDVFTYNSILHGFCRQNQMKEAEV 678
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN 116
VL M++ G P TY +I+G+ +L E+ R+ DEM++RG P+
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 198/377 (52%), Gaps = 1/377 (0%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
A + M ++ M P+ V+Y ++NG CK+G LA +L M + EP V Y T
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
+IDG ++ ++++L L EM +G+ PN+V Y+S++ L +G +AS++LSDMI++
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
I PD ++++ L + + G L EA KL+++++K + + + L+N C
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
M+++ PDV T T+I G CK E+ + ++ M + N YN I GL
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 268 CKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANR 326
+ D+A+ + E+ + + T+NTL+ G +G++++A + ++ +
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 327 VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDY 386
TYN +I +CK G E+ +L + ++G++PD + Y T+I+ F +K EE AL
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 387 MILKGVIPDQKTYDAIV 403
M G +P+ Y+ ++
Sbjct: 562 MKEDGTLPNSGCYNTLI 578
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 206/425 (48%), Gaps = 39/425 (9%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K D+ + + ++M + + N +Y+ +IN FC++ L LA VLG M+
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNL---GIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+EP++ T ++L++GY + E++ L D+M G PN V +N++++ L+ H
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ----------------- 177
EA ++ M+ K PD +Y ++ GLC+ G A L N+
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 178 --ILKFDLIEDAFSL----------------NILLNYICKSXXXXXXXXXXGSMITRGLP 219
+ K+ ++DA +L + L++ +C MI R +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PDV+T + +ID K G +A +LY+ M+K P++ Y+S ING C D AK +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 280 VDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
+ + K D T+NTLI G+ +++E + EM GL N VTYN LI L +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
G + A+E+ K M+ G+ P+ +TY TL+ K E+ + + +Y+ + P T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 399 YDAIV 403
Y+ ++
Sbjct: 504 YNIMI 508
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 184/350 (52%), Gaps = 4/350 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG CK +D AL + K+M + PN V+Y+S+I+ C G A +L DM+
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMET---KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ P V T++ LID + + G L E+ +L DEMV+R + P+IV Y+S++ H ++
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M+ KH PD +Y L +G C+ + E +++ ++ + L+ + + NIL+
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ ++ M++ G+PP++ T T++DG CK G EKA+ ++ + + +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P + YN I G+CK + +L L + + D +NT+ISG+ G +EA L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
EMK G N YNTLI ++G E + EL+K M G D T
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 1/312 (0%)
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
L++++ L EMV+ FP+I+ ++ +L + + + + M + I + Y+Y+I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L CR L AL + +++K + +L+ LLN C S M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
P+ T T+I G +A+ L + M+ QP+L Y +NGLCK TD+A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 278 NLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
NL++++ + KL +NT+I G +D+A L EM++ G+ N VTY++LI+ L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C G +A L+ MI + I PD T++ LI F K+ E L+D M+ + + P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 397 KTYDAIVTPFLL 408
TY +++ F +
Sbjct: 362 VTYSSLINGFCM 373
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 156/299 (52%), Gaps = 5/299 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+D K G L A K+ +M S+ P+ V+Y+S+INGFC L A+++ M
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEM---VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V P V TY TLI G+ ++ +EE + + EM +RGL N V YN ++ L++ GD
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A ++ +M+ + P+ +Y L +GLC+NG L +A+ + + + + ++ NI+
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +CK+ ++ +G+ PDV T+I G C+ G+ E+A L+ M +
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
PN YN+ I + + + L+ E+R DA+T L++ + G++D++F
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 167/342 (48%), Gaps = 1/342 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A + G+MVK+ PS+ ++ L+ A+ + + L ++M G+ N Y+ ++
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R + A VL M+ P+ + + L G C + ++EA+ L +Q+
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
+ + N L++ + M+ +G PD+ T V++G CK G+T+ A L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 304
N M + +P + IYN+ I+GLCK D A NL E+ + + + T+++LIS N
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G+ +A L ++M ++ + T++ LI+ K G EA++L M+ + I P +TY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
++LI F +E + ++M+ K PD TY+ ++ F
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 96/191 (50%), Gaps = 3/191 (1%)
Query: 7 GGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 66
G + +L+ G + G D+A ++ K+ M + V PN ++YN++++G CK G L A
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKE---MVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 67 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 126
V + ++ EP++ TY +I+G + G +E+ L + +G+ P++V YN+++
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 127 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 186
R G EEA + +M + P+ Y L R+G + +L ++ D
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Query: 187 AFSLNILLNYI 197
A ++ ++ N +
Sbjct: 606 ASTIGLVTNML 616
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 243 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYS 302
R ++G D + L+ NGL ++ D + ++ R F+ L+S +
Sbjct: 38 RAFSGKTSYDYREKLSR-----NGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIA 92
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
+ D L +M++LG+ N TY+ LIN C+ A ++ M+ G P+ +
Sbjct: 93 KMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIV 152
Query: 363 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
T ++L+ + E +AL D M + G P+ T++ ++ L
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 203/416 (48%), Gaps = 42/416 (10%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V++ G CK G ++ AL V+ +M SV P+ V+YN+I+ C G L A EVL M
Sbjct: 177 VMISGYCKAGEINNALSVLDRM------SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++ P V TY LI+ R + +++L DEM +RG P++V YN ++ + + G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 134 EEA-----------------------------------SKVLSDMIDKHICPDQYSYAIL 158
+EA K+L+DM+ K P ++ IL
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
LCR G L A+ + ++ + ++ S N LL+ CK M++RG
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
PD+ T T++ CK G E A+ + N + P L YN+ I+GL K T A
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 279 LVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
L+DE+R + L D T+++L+ G S G++DEA E + +G+ N VT+N+++ LC
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 393
K+ + A + + MI +G +P+ +YT LI + +E + L + + KG++
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 191/384 (49%), Gaps = 7/384 (1%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+TG L+ K ++ M + GN P+ + ++I GFC+ G A ++L + +G P
Sbjct: 114 RTGELEEGFKFLENM-VYHGN--VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
V TY +I GY + G + +L + D M + P++V YN+IL L G +++A +VL
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
M+ + PD +Y IL E CR+ + A+KL +++ D + N+L+N ICK
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M + G P+V T ++ C G A +L M++ P++ +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
N IN LC+ A ++++++ + ++ ++N L+ G+ ++D A M S
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
G + VTYNT++ LCK+G E+A E++ + +G P ITY T+I K +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 380 VIALHDYMILKGVIPDQKTYDAIV 403
I L D M K + PD TY ++V
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLV 491
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 183/405 (45%), Gaps = 18/405 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFC--------------K 59
VL+ A K S L + K L +G S + Y+S+ + F +
Sbjct: 55 VLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVR 114
Query: 60 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 119
G L + L +MV G P + TLI G+ R G ++ ++ + + G P+++
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 120 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 179
YN ++ + G++ A VL M + PD +Y + LC +G L +A+++ +++L
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 180 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 239
+ D D + IL+ C+ M RG PDV T +++G CK G +
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 240 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVAKNLVDELRKRKLLDATTFNTLI 298
+A++ N M QPN+ +N + +C D K L D LRK TFN LI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 358
+ G + A + +M G N ++YN L++ CK + A E ++ M+ +G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 359 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
PD +TY T++T K E+ + + + + KG P TY+ ++
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 21/338 (6%)
Query: 76 AGFEPSVRTYATLIDGYA------RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
+G + + TL GY+ + S+ S L D V N+ L + R
Sbjct: 66 SGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALED-----------VESNNHLRQMVR 114
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
G++EE K L +M+ PD L G CR G +A K+ + + D +
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
N++++ CK+ M + PDV T T++ C G ++A+ + + M+
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQID 308
+ D P++ Y I C+ + A L+DE+R R D T+N L++G G++D
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
EA +M S G N +T+N ++ +C G +A++L+ M+ +G P +T+ LI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+K I + + M G P+ +Y+ ++ F
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
Query: 6 SGGCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 61
S GC + V +L CK G ++ A++++ N ++ P ++YN++I+G K G
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEIL---NQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 62 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 121
A ++L +M +P TY++L+ G +R G ++E+++ E G+ PN V +N
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Query: 122 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 181
SI+ L + + A L MI++ P++ SY IL EGL G EAL+L N++
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Query: 182 DLIEDA 187
L++ +
Sbjct: 584 GLMKKS 589
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 197/364 (54%), Gaps = 1/364 (0%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+ V+Y ++NG CK+G + LA +L M + EP V Y T+ID + ++ ++L L
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL 278
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
EM +G+ PN+V YNS++ L +G +AS++LSDMI++ I P+ +++ L + +
Sbjct: 279 FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G L EA KL+++++K + D F+ + L+N C MI++ P+V T
Sbjct: 339 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 398
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
T+I G CK ++ + L+ M + N Y + I+G + D A+ + ++
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 285 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+L D T++ L+ G N+G+++ A + ++ + + TYN +I +CK G E
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ +L + ++G++P+ +TYTT+++ F +K EE AL M +G +PD TY+ ++
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 404 TPFL 407
L
Sbjct: 579 RAHL 582
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 195/390 (50%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K DL + + ++M + + N +Y+ +IN FC++ L LA VL M+
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNL---GISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+EP + T +L++G+ + +++ L +MVE G P+ +N++++ L+RH
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M+ K PD +Y I+ GLC+ G + AL L ++ + + N ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +C M +G+ P+V T ++I C G A RL + MI+
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PN+ +++ I+ K A+ L DE+ KR + D T+++LI+G+ ++DEA +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M S N VTYNTLI CK +E EL + M +G+ + +TYTTLI F +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + M+ GV+PD TY ++
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 180/356 (50%), Gaps = 4/356 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++++G CK G +DLAL ++KKM + P V YN+II+ C + A + +M
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKME---QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G P+V TY +LI +G ++ RL +M+ER + PN+V +++++ + G +
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA K+ +MI + I PD ++Y+ L G C + L EA + ++ D + + N L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ CK+ M RGL + T T+I G + + A ++ M+
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
P++ Y+ ++GLC + A + + L++ K+ D T+N +I G +G++++ +
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
L + G+ N VTY T+++ C+ G EEA L + M +G PD TY TLI
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 158/312 (50%), Gaps = 1/312 (0%)
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
L++++ L +MV+ FP+IV ++ +L + + + + M + I + Y+Y+I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L CR L+ AL + +++K D +LN LLN C G M+ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
PD +T T+I G + +A+ L + M+ QP+L Y +NGLCK D+A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 278 NLVDELRKRKLLDATT-FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+L+ ++ + K+ +NT+I N +++A L TEM + G+ N VTYN+LI L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C G +A L+ MI + I P+ +T++ LI F K+ E L+D MI + + PD
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 397 KTYDAIVTPFLL 408
TY +++ F +
Sbjct: 362 FTYSSLINGFCM 373
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 169/345 (48%), Gaps = 1/345 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A + GDMVK+ PS+ ++ L+ A+ + + L ++M G+ N+ Y+ ++
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R + A VL+ M+ PD + L G C +++A+ L Q+++
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D+F+ N L++ + + M+ +G PD+ T V++G CK G+ + AL L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 304
M + +P + IYN+ I+ LC + + A NL E+ + + + T+N+LI N
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G+ +A L ++M ++ N VT++ LI+ K G EA++L MI + I PD TY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
++LI F +E + + MI K P+ TY+ ++ F A
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 153/298 (51%), Gaps = 5/298 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D K G L A K+ +M S+ P+ +Y+S+INGFC L A+ + M+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEM---IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
P+V TY TLI G+ + ++E + L EM +RGL N V Y ++++ ++ + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A V M+ + PD +Y+IL +GLC NG + AL + + + + D ++ NI++
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+CK+ S+ +G+ P+V T T++ G C+ G E+A L+ M +
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
P+ YN+ I + + L+ E+R + + DA+T L++ + G++D++F
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKSF 625
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 1/253 (0%)
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 211
+Y Y ++ + L +A+ L ++K + LL+ I K
Sbjct: 46 RYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGE 105
Query: 212 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 271
M G+ ++YT + +I+ C+ AL + M+K+ +P++ NS +NG C
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 272 STDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
A +LV ++ + D+ TFNTLI G + EA L M G + VTY
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 331 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
++N LCK G + A L+K M I P + Y T+I + + + L M K
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 391 GVIPDQKTYDAIV 403
G+ P+ TY++++
Sbjct: 286 GIRPNVVTYNSLI 298
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 193/370 (52%), Gaps = 5/370 (1%)
Query: 42 SVW---PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 98
SVW P+ ++N +I C+ L A +L DM G P +T+ T++ GY G L
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDL 240
Query: 99 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH-ICPDQYSYAI 157
+ +LR+ ++MVE G + V N I++ + G +E+A + +M ++ PDQY++
Sbjct: 241 DGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L GLC+ G++ A+++ + +L+ D ++ N +++ +CK MITR
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
P+ T T+I CK E+A L + P++ +NS I GLC + VA
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L +E+R + D T+N LI + G++DEA + +M+ G + + +TYNTLI+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK EA+E+ M + G+ + +TY TLI K E+ L D MI++G PD+
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 397 KTYDAIVTPF 406
TY++++T F
Sbjct: 541 YTYNSLLTHF 550
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 201/391 (51%), Gaps = 4/391 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V++ G CK G ++ AL +++M+ G +P+ ++N+++NG CK G + A E++ M
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDG--FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++ G++P V TY ++I G + G ++E++ + D+M+ R PN V YN+++ L + +
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQV 381
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EEA+++ + K I PD ++ L +GLC A++L ++ D F+ N+L
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ +C M G V T T+IDG CK T +A +++ M
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFG 312
N YN+ I+GLCK + A L+D++ + + D T+N+L++ + G I +A
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
+ M S G + VTY TLI+ LCK G E A +L++ + M+GI Y +I
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLF 621
Query: 373 KKHHPEEVIALHDYMILKG-VIPDQKTYDAI 402
+K E I L M+ + PD +Y +
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 200/391 (51%), Gaps = 5/391 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G + G LD AL++ ++M + W N VS N I++GFCK+G + A + +M
Sbjct: 230 VMQGYIEEGDLDGALRIREQM--VEFGCSWSN-VSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 75 -KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ GF P T+ TL++G + G ++ ++ + D M++ G P++ YNS++ L + G++
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA +VL MI + P+ +Y L LC+ + EA +L + ++ D + N L
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +C + M ++G PD +T +ID C G ++AL + M
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
++ YN+ I+G CK T A+ + DE+ + ++ T+NTLI G S ++++A
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L +M G ++ TYN+L+ C+ G ++A ++++ M G PD +TY TLI+
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K E L + +KG+ Y+ ++
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 176/403 (43%), Gaps = 38/403 (9%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P Y I+ + G +++L DM + E T+ LI+ YA++ +E L +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 105 CDEMVER------------------------------------GLFPNIVVYNSILYWLY 128
D M++ G+ P++ +N ++ L
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
R + A +L DM + PD+ ++ + +G G L AL++ Q+++F
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
S+N++++ CK M + G PD YT T+++G CK G+ + A+ + +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQ 306
M++ P++ YNS I+GLCK+ A ++D++ R T T+NTLIS Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
++EA L + S G+ + T+N+LI LC A EL + M +G PD TY
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
LI K +E + + M L G TY+ ++ F A
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL C+ G + A +++ M T N P+ V+Y ++I+G CK G + +A ++L +
Sbjct: 546 LLTHFCRGGDIKKAADIVQAM---TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG-LFPNIVVYNSILYWLYR-HGD 132
G + Y +I G R E++ L EM+E+ P+ V Y + L G
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 180
+ EA L ++++K P+ S +L EGL +KL N +++
Sbjct: 663 IREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 710
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 197/374 (52%), Gaps = 1/374 (0%)
Query: 35 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 94
++ M P+ +Y +++NG CK+G + LA +L M K E V Y T+ID
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 95 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 154
+ ++ ++L L EM +G+ PN+V YNS++ L +G +AS++LSDMI++ I P+ +
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 155 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
++ L + + G L EA KL+++++K + D F+ + L+N C MI
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
++ P+V T T+I G CK E+ + L+ M + N YN+ I GL + D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 275 VAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 333
+A+ + ++ + D T++ L+ G G++++A + ++ + + TYN +I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 334 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 393
+CK G E+ +L + ++G++P+ I YTT+I+ F +K EE AL M G +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 394 PDQKTYDAIVTPFL 407
P+ TY+ ++ L
Sbjct: 568 PNSGTYNTLIRARL 581
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 207/426 (48%), Gaps = 41/426 (9%)
Query: 15 LLDGACKTGSLDLALKVMKKM-NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
LL K DL + + ++M NL ++ SYN +IN FC++ L LA VLG M
Sbjct: 86 LLSAIAKMNKFDLVISLGERMQNLRISYDLY----SYNILINCFCRRSQLPLALAVLGKM 141
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+K G+EP + T ++L++GY + E++ L D+M PN V +N++++ L+ H
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 201
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK------------- 180
EA ++ M+ + PD ++Y + GLC+ G + AL L ++ K
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 181 ------FDLIEDAFSL----------------NILLNYICKSXXXXXXXXXXGSMITRGL 218
+ + DA +L N L+ +C MI R +
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
P+V T + +ID K G +A +LY+ MIK P++ Y+S ING C D AK+
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 279 LVD-ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
+ + + K + T+NTLI G+ + +++E L EM GL N VTYNTLI L
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
+ G + A+++ K M+ G+ PD ITY+ L+ K E+ + + +Y+ + PD
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 398 TYDAIV 403
TY+ ++
Sbjct: 502 TYNIMI 507
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 189/387 (48%), Gaps = 33/387 (8%)
Query: 15 LLDGACKTGSLDLALKVMKKM-----------------------------NLMT---GNS 42
+++G CK G +DLAL ++KKM NL T
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 43 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 102
+ PN V+YNS+I C G A +L DM++ P+V T++ LID + + G L E+
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 103 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
+L DEM++R + P+I Y+S++ H ++EA + MI K P+ +Y L +G
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
C+ + E ++L ++ + L+ + + N L+ + ++ M++ G+PPD+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
T + ++DG CK G EKAL ++ + K +P++ YN I G+CK + +L
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 283 LRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
L + + + + T+ISG+ G +EA L EMK G N TYNTLI ++G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLI 368
+ EL+K M G D T + +I
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVI 612
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 150/310 (48%), Gaps = 1/310 (0%)
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
L++++ L EMV+ P+IV +N +L + + + + M + I D YSY I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L CR L AL + +++K D +L+ LLN C M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
P+ T T+I G +A+ L + M+ QP+L Y + +NGLCK D+A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+L+ ++ K K+ D + T+I N +++A L TEM + G+ N VTYN+LI L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C G +A L+ MI + I P+ +T++ LI F K+ E L+D MI + + PD
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 397 KTYDAIVTPF 406
TY +++ F
Sbjct: 361 FTYSSLINGF 370
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 156/298 (52%), Gaps = 5/298 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D K G L A K+ +M S+ P+ +Y+S+INGFC L A+ + M+
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEM---IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
P+V TY TLI G+ + +EE + L EM +RGL N V YN+++ L++ GD +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A K+ M+ + PD +Y+IL +GLC+ G L +AL + + K + D ++ NI++
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+CK+ S+ +G+ P+V T+I G C+ G E+A L+ M +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
PN YN+ I + + L+ E+R + DA+T + +I+ + G++++++
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD-GRLEKSY 624
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 164/342 (47%), Gaps = 1/342 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A ++ G+MV++ PS+ + L+ A+ + + L + M + ++ YN ++
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R + A VL M+ PD + + L G C ++EA+ L +Q+ +
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
+ + N L++ + M+ RG PD++T TV++G CK G+ + AL L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 304
M K + ++ IY + I+ LC + + A NL E+ + + + T+N+LI N
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G+ +A L ++M ++ N VT++ LI+ K G EA++L MI + I PD TY
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
++LI F +E + + MI K P+ TY+ ++ F
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 7 GGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 66
G + L+ G + G D+A K+ KK M + V P+ ++Y+ +++G CK G L A
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKK---MVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 67 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 126
V + K+ EP + TY +I+G + G +E+ L + +G+ PN+++Y +++
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 127 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 186
R G EEA + +M + P+ +Y L R+G + +L ++ + D
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604
Query: 187 AFSLNILLN 195
A ++++++N
Sbjct: 605 ASTISMVIN 613
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 205/389 (52%), Gaps = 9/389 (2%)
Query: 18 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 77
G CK ++ A K++ +M L+ G + P+ ++Y ++NG CK G + A+++ + K
Sbjct: 296 GLCKFDRINEAAKMVNRM-LIRGFA--PDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 350
Query: 78 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSILYWLYRHGDMEEA 136
P + + TLI G+ G L+++ + +MV G+ P++ YNS++Y ++ G + A
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 137 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 196
+VL DM +K P+ YSY IL +G C+ G + EA + N++ L + N L++
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 197 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 256
CK M +G PDVYT ++I G C++ + AL L MI N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 257 LTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 315
YN+ IN + A+ LV+E+ + LD T+N+LI G +G++D+A L
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
+M G + + ++ N LIN LC++G EEA E K M+++G PD +T+ +LI +
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAIVT 404
E+ + + + +G+ PD T++ +++
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 3/355 (0%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G G LD A V+ M +T + P+ +YNS+I G+ K+G + LA EVL DM
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDM--VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G +P+V +Y L+DG+ + G ++E+ + +EM GL PN V +N ++ + +
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ +M K PD Y++ L GLC + AL L ++ ++ + + N L+
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N + M+ +G P D T ++I G C+ G +KA L+ M++
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDEAFGL 313
P+ N INGLC+ + A E+ R D TFN+LI+G +G+I++ +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
++++ G+ + VT+NTL++ LCK G +A L+ I G P+ T++ L+
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 174/390 (44%), Gaps = 33/390 (8%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + P ++ ++ FC + A +L DM K G P+ Y TLI ++
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+ E+L+L +EM G P+ +N ++ L + + EA+K+++ M+ + PD +Y
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 158 LTEGLCRNGYLTEALKLHNQILK--------------------------------FDLIE 185
L GLC+ G + A L +I K + ++
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D + N L+ K M +G P+VY+ ++DG CKLG ++A +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNS 304
N M +PN +N I+ CK A + E+ RK D TFN+LISG
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
+I A L +M S G+ AN VTYNTLIN + G +EA++L+ M+ QG D ITY
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIP 394
+LI + ++ +L + M+ G P
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 145/269 (53%), Gaps = 3/269 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+DG CK G +D A V+ N M+ + + PN+V +N +I+ FCK+ + A E+ +M
Sbjct: 429 ILVDGFCKLGKIDEAYNVL---NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G +P V T+ +LI G ++ +L L +M+ G+ N V YN+++ R G++
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA K++++M+ + D+ +Y L +GLCR G + +A L ++L+ S NIL
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N +C+S M+ RG PD+ T ++I+G C+ G E L ++ +
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDE 282
P+ +N+ ++ LCK A L+DE
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 176/372 (47%), Gaps = 14/372 (3%)
Query: 42 SVWPNSVSYNSI----INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
S P SYN + ++G C K +A V DM+ P++ T+ ++ +
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++ +L L +M + G PN V+Y ++++ L + + EA ++L +M PD ++
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ GLC+ + EA K+ N++L D + L+N +CK + R
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK----IGRVDAAKDLFYRI 348
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMI-KMDEQPNLTIYNSFINGLCKMASTDVA 276
P++ T+I G G + A + + M+ P++ YNS I G K +A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 277 KNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
++ ++R + + ++ L+ G+ G+IDEA+ + EM + GL N V +N LI+
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
CK EA E+ + M +G +PD T+ +LI+ + + + L MI +GV+ +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 396 QKTYDAIVTPFL 407
TY+ ++ FL
Sbjct: 529 TVTYNTLINAFL 540
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 199/390 (51%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K DL + +KM ++ V N +YN +IN C++ L A +LG M+
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEIL---GVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+ PS+ T +L++G+ + E++ L D+MVE G P+ V + ++++ L++H
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M+ K PD +Y + GLC+ G AL L N++ K + D + ++
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK M +G+ PDV+T +++I C G A RL + M++
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PN+ +NS I+ K A+ L DE+ +R + + T+N+LI+G+ ++DEA +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
T M S + VTYNTLIN CK + EL + M +G+ + +TYTTLI F +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + M+ GV P+ TY+ ++
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 183/366 (50%), Gaps = 8/366 (2%)
Query: 8 GCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 63
GC + V +++G CK G DLAL ++ KM + + V Y+++I+ CK +
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKME---KGKIEADVVIYSTVIDSLCKYRHV 256
Query: 64 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 123
A + +M G P V TY++LI +G ++ RL +M+ER + PN+V +NS+
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 124 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
+ + G + EA K+ +MI + I P+ +Y L G C + L EA ++ ++ D
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
+ D + N L+N CK+ M RGL + T T+I G + + + A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYS 302
++ M+ PN+ YN+ ++GLCK + A + + L+K K+ D T+N + G
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
+G++++ + L + G+ + + YNT+I+ CK G EEA L M G PD
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 363 TYTTLI 368
TY TLI
Sbjct: 557 TYNTLI 562
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 190/371 (51%), Gaps = 1/371 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M P+ V+Y ++ING CK+G LA +L M K E V Y+T+ID ++
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++++L L EM +G+ P++ Y+S++ L +G +AS++LSDM+++ I P+ ++
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + + G L EA KL +++++ + + + N L+N C M+++
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
PDV T T+I+G CK + L+ M + N Y + I+G + + D A+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+ ++ + + T+NTL+ G +G++++A + ++ + + TYN + +
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK G E+ +L + ++G++PD I Y T+I+ F KK EE L M G +PD
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 397 KTYDAIVTPFL 407
TY+ ++ L
Sbjct: 556 GTYNTLIRAHL 566
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 180/351 (51%), Gaps = 4/351 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++D CK +D AL + +M+ + P+ +Y+S+I+ C G A +L DM+
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMD---NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ P+V T+ +LID +A+ G L E+ +L DEM++R + PNIV YNS++ H ++
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ + M+ K PD +Y L G C+ + + ++L + + L+ + + L+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ ++ M++ G+ P++ T T++DG CK G EKA+ ++ + K +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P++ YN G+CK + +L L + + D +NT+ISG+ G +EA+ L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
+MK G + TYNTLI ++G + EL+K M D TY
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 152/301 (50%), Gaps = 11/301 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D K G L A K+ +M S+ PN V+YNS+INGFC L A+++ MV
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEM---IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
P V TY TLI+G+ + + + + L +M RGL N V Y ++++ ++ D +
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A V M+ + P+ +Y L +GLC+NG L +A+ + + K + D ++ NI+
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+CK+ S+ +G+ PDV T+I G CK G E+A L+ IKM E
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF---IKMKED 549
Query: 255 ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 310
P+ YN+ I + + L+ E+R + DA+T+ L++ + G++D+
Sbjct: 550 GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKG 608
Query: 311 F 311
F
Sbjct: 609 F 609
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 36/166 (21%)
Query: 274 DVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 332
D A +L E+ K R F+ L+S + + D +M+ LG+S N TYN +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 333 INLLCK------------------------------NG-CD----EEAKELMKMMIMQGI 357
IN LC+ NG C EA L+ M+ G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 358 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+PD +T+TTL+ + + E +AL + M++KG PD TY A++
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 194/392 (49%), Gaps = 7/392 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K DL + + ++M + + N +Y+ IN FC++ L LA +LG M+
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNL---GISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+ PS+ T +L++G+ + E++ L D+MVE G P+ V + ++++ L++H
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M+ K PD +Y + GLC+ G AL L N++ K + D N ++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK M T+G+ PDV+T +I C G A RL + M++ +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRK--LLDATTFNTLISGYSNSGQIDEAFG 312
P+L +N+ I+ K A+ L DE+ K K D +NTLI G+ +++E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 313 LTTEMKSLGLSANRVTYNTLIN-LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+ EM GL N VTY TLI+ CD A+ + K M+ G+ PD +TY L+
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCD-NAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ E + + +YM + + D TY ++
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 181/363 (49%), Gaps = 9/363 (2%)
Query: 8 GCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 63
GC + V +++G CK G DLAL ++ KM + + V YN+II+G CK +
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKME---KGKIEADVVIYNTIIDGLCKYKHM 266
Query: 64 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 123
A ++ M G +P V TY LI +G ++ RL +M+E+ + P++V +N++
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 124 LYWLYRHGDMEEASKVLSDMI-DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 182
+ + G + EA K+ +M+ KH PD +Y L +G C+ + E +++ ++ +
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 183 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 242
L+ + + L++ ++ M++ G+ PD+ T ++DG C GN E AL
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 243 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGY 301
++ M K D + ++ Y + I LCK + +L L + + + T+ T++SG+
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Query: 302 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 361
G +EA L EMK G N TYNTLI ++G + + EL+K M G D
Sbjct: 507 CRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA 566
Query: 362 ITY 364
T+
Sbjct: 567 STF 569
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 2/343 (0%)
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
+ GDMVK+ PS+ ++ L+ A+ + + L ++M G+ N+ Y+ + +
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
R + A +L M+ P + L G C ++EA+ L +Q+++ D
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ L++ + + M+ +G PD+ T VI+G CK G + AL L N M
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 307
K + ++ IYN+ I+GLCK D A +L +++ + + D T+N LIS N G+
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 308 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM-QGIRPDCITYTT 366
+A L ++M ++ + V +N LI+ K G EA++L M+ + PD + Y T
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
LI F K EE + + M +G++ + TY ++ F A
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 144/276 (52%), Gaps = 3/276 (1%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF-EPSVRTYATLIDGYARWG 96
M ++ P+ V +N++I+ F K+G L+ AE++ +MVK+ P V Y TLI G+ ++
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 97 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 156
+EE + + EM +RGL N V Y ++++ ++ D + A V M+ + PD +Y
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 157 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 216
IL +GLC NG + AL + + K D+ D + ++ +CK+ S+ +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
G+ P+V T T++ G C+ G E+A L+ M + PN YN+ I + +
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 277 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
L+ E+R DA+TF L++ + G++D++F
Sbjct: 551 AELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKSF 585
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 1/238 (0%)
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
L +A+ L ++K + LL+ I K M G+ ++YT +
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
I+ C+ AL + M+K+ P++ NS +NG C A LVD++ +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 288 LL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
D TF TL+ G + EA L M G + VTY +IN LCK G + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
L+ M I D + Y T+I K H ++ L + M KG+ PD TY+ +++
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 198/390 (50%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K D+ + + +KM + + +YN +IN FC++ + LA +LG M+
Sbjct: 91 LLSAIAKMKKFDVVISLGEKMQRL---EIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+EPS+ T ++L++GY + +++ L D+MVE G P+ + + ++++ L+ H
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M+ + P+ +Y ++ GLC+ G AL L N++ + D N ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK M T+G+ P+V T +++I C G A +L + MI+
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PNL +N+ I+ K A+ L D++ KR + D T+N+L++G+ ++D+A +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M S + VTYNTLI CK+ E+ EL + M +G+ D +TYTTLI
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + M+ GV PD TY ++
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 181/356 (50%), Gaps = 4/356 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V+++G CK G DLAL ++ KM + + V +N+II+ CK + A + +M
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKME---AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G P+V TY++LI +G ++ +L +M+E+ + PN+V +N+++ + G
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA K+ DMI + I PD ++Y L G C + L +A ++ ++ D D + N L
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ CKS M RGL D T T+I G G+ + A +++ M+
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
P++ Y+ ++GLC + A + D ++K ++ LD + T+I G +G++D+ +
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
L + G+ N VTYNT+I+ LC +EA L+K M G P+ TY TLI
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 185/371 (49%), Gaps = 1/371 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M PN V+Y ++NG CK+G LA +L M A E V + T+ID ++
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++++L L EM +G+ PN+V Y+S++ L +G +AS++LSDMI+K I P+ ++
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + + G EA KL++ ++K + D F+ N L+N C M+++
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
PDV T T+I G CK E L+ M + Y + I GL D A+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+ ++ + D T++ L+ G N+G++++A + M+ + + Y T+I +
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK G ++ +L + ++G++P+ +TY T+I+ K +E AL M G +P+
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 397 KTYDAIVTPFL 407
TY+ ++ L
Sbjct: 576 GTYNTLIRAHL 586
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 176/339 (51%), Gaps = 4/339 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++D CK +D AL + K+M + PN V+Y+S+I+ C G A ++L DM+
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMET---KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ P++ T+ LID + + G E+ +L D+M++R + P+I YNS++ H ++
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A ++ M+ K PD +Y L +G C++ + + +L ++ L+ D + L+
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ M++ G+PPD+ T + ++DG C G EKAL +++ M K + +
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
++ IY + I G+CK D +L L + + + T+NT+ISG + + EA+ L
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
+MK G N TYNTLI ++G + EL++ M
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 153/312 (49%), Gaps = 1/312 (0%)
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
L++++ L MV+ P+IV +N +L + + + + M I Y+Y I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L CR ++ AL L +++K +L+ LLN C M+ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
PD T T+I G +A+ L + M++ QPNL Y +NGLCK TD+A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
NL++++ K+ D FNT+I +D+A L EM++ G+ N VTY++LI+ L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C G +A +L+ MI + I P+ +T+ LI F K+ E L+D MI + + PD
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 397 KTYDAIVTPFLL 408
TY+++V F +
Sbjct: 366 FTYNSLVNGFCM 377
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 149/299 (49%), Gaps = 5/299 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+D K G ++ K + M S+ P+ +YNS++NGFC L A+++ M
Sbjct: 335 ALIDAFVKEGKF---VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V P V TY TLI G+ + +E+ L EM RGL + V Y +++ L+ GD
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A KV M+ + PD +Y+IL +GLC NG L +AL++ + + K ++ D + +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +CK+ S+ +G+ P+V T T+I G C ++A L M +
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
PN YN+ I + + L+ E+R + + DA+T L++ + G++D++F
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 629
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 169/368 (45%), Gaps = 1/368 (0%)
Query: 40 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 99
G + S Y I+ L A + G MVK+ PS+ + L+ A+ +
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
+ L ++M + + YN ++ R + A +L M+ P + + L
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
G C +++A+ L +Q+++ D + L++ + M+ RG
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
P++ T V++G CK G+T+ AL L N M + ++ I+N+ I+ LCK D A NL
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 280 VDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
E+ + + + T+++LIS + G+ +A L ++M ++ N VT+N LI+ K
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
G EA++L MI + I PD TY +L+ F ++ + ++M+ K PD T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 399 YDAIVTPF 406
Y+ ++ F
Sbjct: 403 YNTLIKGF 410
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 187/359 (52%), Gaps = 4/359 (1%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N ++N +IN CK+G L A+ LG M G +P++ TY TL+ G++ G +E + +
Sbjct: 224 NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLII 283
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
EM +G P++ YN IL W+ G AS+VL +M + + PD SY IL G N
Sbjct: 284 SEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNN 340
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G L A ++++K ++ ++ N L++ + + +G+ D T
Sbjct: 341 GDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+I+G C+ G+ +KA L++ M+ QP Y S I LC+ T A L +++
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460
Query: 286 RKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
+ + D NTL+ G+ G +D AF L EM + ++ + VTYN L+ LC G EE
Sbjct: 461 KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEE 520
Query: 345 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
A+ELM M +GI+PD I+Y TLI+ ++KK + + D M+ G P TY+A++
Sbjct: 521 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALL 579
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 175/332 (52%), Gaps = 4/332 (1%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M P+ +YN I++ C +G A EVL +M + G P +Y LI G + G
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
LE + DEMV++G+ P YN++++ L+ +E A ++ ++ +K I D +Y I
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L G C++G +A LH++++ + F+ L+ +C+ ++ +G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ PD+ T++DG+C +GN ++A L M M P+ YN + GLC + A+
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L+ E+++R + D ++NTLISGYS G AF + EM SLG + +TYN L+ L
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
KN E A+EL++ M +GI P+ ++ ++I
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 191/391 (48%), Gaps = 7/391 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++++ CK G L A + M + + P V+YN+++ GF +G + A ++ +M
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVF---GIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
GF+P ++TY ++ G E LR EM E GL P+ V YN ++ +GD+
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
E A +M+ + + P Y+Y L GL + A L +I + ++ D+ + NIL
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N C+ M+T G+ P +T ++I C+ T +A L+ ++
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
+P+L + N+ ++G C + + D A +L+ E+ + D T+N L+ G G+ +EA
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L EMK G+ + ++YNTLI+ K G + A + M+ G P +TY L+ +
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K E L M +G++P+ ++ +++
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 36/259 (13%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
+SV+YN +ING+C+ G A + +M+ G +P+ TY +LI R E+ L
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+++V +G+ P++V+ N+++ G+M+ A +L +M I PD +Y L GLC
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G EA +L G M RG+ PD +
Sbjct: 516 GKFEEAREL-----------------------------------MGEMKRRGIKPDHISY 540
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
T+I G K G+T+ A + + M+ + P L YN+ + GL K ++A+ L+ E++
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 286 RKLL-DATTFNTLISGYSN 303
++ + ++F ++I SN
Sbjct: 601 EGIVPNDSSFCSVIEAMSN 619
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L++G C+ G A + +M MT + + P +Y S+I C+K A+E+ +
Sbjct: 402 ILINGYCQHGDAKKAFALHDEM--MT-DGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V G +P + TL+DG+ G+++ + L EM + P+ V YN ++ L G
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EEA +++ +M + I PD SY L G + G A + +++L + N L
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 231
L + K+ M + G+ P+ + +VI+
Sbjct: 579 LKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAF 311
E + +++ + C++ D A ++++ T T N +++ S +I+ A+
Sbjct: 151 ETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAW 210
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+M + + +N T+N +IN+LCK G ++AK + +M + GI+P +TY TL+ F
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+ + E + M KG PD +TY+ I++
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 198/390 (50%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K DL + + +KM + + N +YN +IN FC++ + LA +LG M+
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRL---GISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+EPS+ T ++L++GY + +++ L D+MVE G P+ + + ++++ L+ H
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M+ + P+ +Y ++ GLC+ G + A L N++ + D N ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK M T+G+ P+V T +++I C G A +L + MI+
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PNL +N+ I+ K A+ L D++ KR + D T+N+LI+G+ ++D+A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M S + TYNTLI CK+ E+ EL + M +G+ D +TYTTLI
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + M+ GV PD TY ++
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 186/406 (45%), Gaps = 71/406 (17%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M PN V+Y ++NG CK+G + LA +L M A E V + T+ID ++
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++++L L EM +G+ PN+V Y+S++ L +G +AS++LSDMI+K I P+ ++
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + + G EA KLH+ MI R
Sbjct: 261 LIDAFVKEGKFVEAEKLHDD-----------------------------------MIKRS 285
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ PD++T ++I+G C +KA +++ M+ D P+L YN+ I G CK +
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L E+ R L+ D T+ TLI G + G D A + +M S G+ + +TY+ L++ L
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 337 CKNGCDEEAKELMKMM-----------------------------------IMQGIRPDC 361
C NG E+A E+ M ++G++P+
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
+TY T+I+ K +E AL M G +PD TY+ ++ L
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 181/356 (50%), Gaps = 4/356 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V+++G CK G +DLA ++ KM + + V +N+II+ CK + A + +M
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKME---AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G P+V TY++LI +G ++ +L +M+E+ + PN+V +N+++ + G
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA K+ DMI + I PD ++Y L G C + L +A ++ ++ D D + N L
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ CKS M RGL D T T+I G G+ + A +++ M+
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
P++ Y+ ++GLC + A + D ++K ++ LD + T+I G +G++D+ +
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
L + G+ N VTYNT+I+ LC +EA L+K M G PD TY TLI
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 176/339 (51%), Gaps = 4/339 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++D CK +D AL + K+M + PN V+Y+S+I+ C G A ++L DM+
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMET---KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ P++ T+ LID + + G E+ +L D+M++R + P+I YNS++ H ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A ++ M+ K PD +Y L +G C++ + + +L ++ L+ D + L+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ M++ G+PPD+ T + ++DG C G EKAL +++ M K + +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
++ IY + I G+CK D +L L + + + T+NT+ISG + + EA+ L
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
+MK G + TYNTLI ++G + EL++ M
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 146/302 (48%), Gaps = 1/302 (0%)
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 167
MV+ P+I +N +L + + + + M I + Y+Y IL CR
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
++ AL L +++K +L+ LLN C M+ G PD T T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
+I G +A+ L + M++ QPNL Y +NGLCK D+A NL++++ K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 288 L-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
+ D FNT+I +D+A L EM++ G+ N VTY++LI+ LC G +A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+L+ MI + I P+ +T+ LI F K+ E LHD MI + + PD TY++++ F
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 407 LL 408
+
Sbjct: 301 CM 302
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 1/335 (0%)
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
MVK+ PS+ + L+ A+ + + L ++M G+ N+ YN ++ R
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+ A +L M+ P + + L G C +++A+ L +Q+++ D +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L++ + M+ RG P++ T V++G CK G+ + A L N M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
+ ++ I+N+ I+ LCK D A NL E+ + + + T+++LIS + G+ +A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
L ++M ++ N VT+N LI+ K G EA++L MI + I PD TY +LI F
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
++ + ++M+ K PD TY+ ++ F
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 149/324 (45%), Gaps = 39/324 (12%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+D K G ++ K + M S+ P+ +YNS+INGFC L A+++ M
Sbjct: 260 ALIDAFVKEGKF---VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V P + TY TLI G+ + +E+ L EM RGL + V Y +++ L+ GD
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A KV M+ + PD +Y+IL +GLC NG L +AL+ +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE-------------------V 417
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+Y+ KS + D+Y T+I+G CK G + L+ +
Sbjct: 418 FDYMQKSE----------------IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDEAFG 312
+PN+ YN+ I+GLC A L+ ++++ L D+ T+NTLI + G +
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 313 LTTEMKSLGLSANRVTYNTLINLL 336
L EM+S + T + N+L
Sbjct: 522 LIREMRSCRFVGDASTIGLVANML 545
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 190/369 (51%), Gaps = 4/369 (1%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG- 96
M + PN ++N +IN CK G + A +V+ DM G P+V +Y TLIDGY + G
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 97 --SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 154
+ ++ + EMVE + PN+ +N ++ ++ ++ + KV +M+D+ + P+ S
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 155 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
Y L GLC G ++EA+ + ++++ + + + N L+N CK+ GS+
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
+G P +ID CKLG + L M + P++ YN I GLC+ + +
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 275 VAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
AK L D+L + L D TF+ L+ GY G+ +A L EM +GL +TYN ++
Sbjct: 454 AAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMK 513
Query: 335 LLCKNGCDEEAKEL-MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 393
CK G + A + +M + +R + +Y L+ +++K E+ L + M+ KG++
Sbjct: 514 GYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Query: 394 PDQKTYDAI 402
P++ TY+ +
Sbjct: 574 PNRITYEIV 582
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 193/387 (49%), Gaps = 25/387 (6%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG---LLLAEEVL 70
V+++ CKTG ++ A VM+ M + PN VSYN++I+G+CK GG + A+ VL
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVY---GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 71 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
+MV+ P++ T+ LIDG+ + +L S+++ EM+++ + PN++ YNS++ L
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
G + EA + M+ + P+ +Y L G C+N L EAL + + +
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
N+L++ CK M G+ PDV T +I G C+ GN E A +L++ +
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDE 309
P+L ++ + G C+ + A L+ E+ K L T+N ++ GY G +
Sbjct: 465 -KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 310 AFGLTTEM-KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
A + T+M K L N +YN L+ + G E+A L+ M+ +G+ P+ ITY
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY---- 579
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPD 395
E++ + M+ +G +PD
Sbjct: 580 ----------EIV--KEEMVDQGFVPD 594
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 184/396 (46%), Gaps = 7/396 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LDG + GS + +++ ++V NS+ + ++ + L E
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMC--DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSG 180
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G++ S + L+ + + + EM+ R + PN+ +N ++ L + G M
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCR---NGYLTEALKLHNQILKFDLIEDAFSLN 191
+A V+ DM P+ SY L +G C+ NG + +A + ++++ D+ + + N
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
IL++ K M+ + + P+V + ++I+G C G +A+ + + M+
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT-FNTLISGYSNSGQIDEA 310
QPNL YN+ ING CK A ++ ++ + + T +N LI Y G+ID+
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
F L EM+ G+ + TYN LI LC+NG E AK+L + +G+ PD +T+ L+
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEG 479
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ +K + L M G+ P TY+ ++ +
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 143/350 (40%), Gaps = 18/350 (5%)
Query: 68 EVLGDMVKAGFEPSV--RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
E+ ++ + +P + R Y+ L+ SLE + +L + + I S L
Sbjct: 69 ELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKI---RSFLD 125
Query: 126 WLYRHGDMEEASKVLS--DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
R+G + + M D ++C + +L N + + +
Sbjct: 126 GFVRNGSDHQVHSIFHAISMCD-NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGY 184
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
A S L+ + K MI R + P+V+T VI+ CK G KA
Sbjct: 185 KLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARD 244
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCKMA-------STDVAKNLVDELRKRKLLDATTFNT 296
+ M PN+ YN+ I+G CK+ + V K +V+ L TTFN
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNL---TTFNI 301
Query: 297 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
LI G+ + + + EM + N ++YN+LIN LC G EA + M+ G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 357 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
++P+ ITY LI F K +E + + + +G +P + Y+ ++ +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 200/426 (46%), Gaps = 41/426 (9%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G CK G + A M +M + P V+Y S++ G+C KG + A + +M
Sbjct: 443 LINGHCKFGDISAAEGFMAEM---INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G PS+ T+ TL+ G R G + ++++L +EM E + PN V YN ++ GDM
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLC------------------------------- 163
+A + L +M +K I PD YSY L GLC
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Query: 164 ----RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
R G L EAL + ++++ + D +L++ K M RGL
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK 679
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PD ++ID K G+ ++A +++ MI PN Y + INGLCK + A+ L
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 280 VDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL-GLSANRVTYNTLINLLC 337
+++ + + T+ + + G++D + L GL AN TYN LI C
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFC 798
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
+ G EEA EL+ MI G+ PDCITYTT+I +++ ++ I L + M KG+ PD+
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 398 TYDAIV 403
Y+ ++
Sbjct: 859 AYNTLI 864
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 186/386 (48%), Gaps = 4/386 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D CK A + +M + + PN V+Y+ +I+ FC++G L A LG+MV
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKI---GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G + SV Y +LI+G+ ++G + + EM+ + L P +V Y S++ G +
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A ++ +M K I P Y++ L GL R G + +A+KL N++ ++++ + + N+++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
C+ M +G+ PD Y+ +I G C G +A +G+ K + +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
N Y ++G C+ + A ++ E+ +R + LD + LI G FGL
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
EM GL + V Y ++I+ K G +EA + +MI +G P+ +TYT +I K
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTY 399
E L M +P+Q TY
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTY 755
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 188/391 (48%), Gaps = 4/391 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+DG CK + A+ + K + G + P+ V+Y +++ G CK + E++ +M
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDL---AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ F PS ++L++G + G +EE+L L +V+ G+ PN+ VYN+++ L +
Sbjct: 324 LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKF 383
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA + M + P+ +Y+IL + CR G L AL +++ L + N L
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N CK MI + L P V T +++ G C G KALRLY+ M
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
P++ + + ++GL + A L +E+ + + + T+N +I GY G + +AF
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
EM G+ + +Y LI+ LC G EAK + + + I YT L+ F
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
++ EE +++ M+ +GV D Y ++
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 189/390 (48%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL G K LA+++ N M + P+ Y +I C+ L A+E++ M
Sbjct: 198 LLHGLVKFRHFGLAMELF---NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHME 254
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G + ++ Y LIDG + + E++ + ++ + L P++V Y +++Y L + + E
Sbjct: 255 ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFE 314
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+++ +M+ P + + + L EGL + G + EAL L +++ F + + F N L+
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK M GL P+ T + +ID C+ G + AL M+ +
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
++ YNS ING CK A+ + E+ +KL T+ +L+ GY + G+I++A L
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
EM G++ + T+ TL++ L + G +A +L M ++P+ +TY +I + +
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + M KG++PD +Y ++
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 159/342 (46%), Gaps = 9/342 (2%)
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
+ K P VRT + L+ G ++ ++ L ++MV G+ P++ +Y ++ L D
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 133 MEEASKVLSDM----IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
+ A ++++ M D +I P Y +L +GLC+ + EA+ + + DL D
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVP----YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ L+ +CK M+ P +++++G K G E+AL L +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQI 307
+ PNL +YN+ I+ LCK A+ L D + K L + T++ LI + G++
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 308 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
D A EM GL + YN+LIN CK G A+ M MI + + P +TYT+L
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 368 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
+ + K + + L+ M KG+ P T+ +++ A
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 157/354 (44%), Gaps = 39/354 (11%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V+++G C+ G + A + +K+M T + P++ SY +I+G C G A+ + +
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEM---TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG--------------------- 112
K E + Y L+ G+ R G LEE+L +C EMV+RG
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 113 --------------LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
L P+ V+Y S++ + GD +EA + MI++ P++ +Y +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
GLC+ G++ EA L +++ + + + L+ + K + I +GL
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
+ T +I G C+ G E+A L MI P+ Y + IN LC+ A
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 279 LVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
L + + ++ + D +NTLI G +G++ +A L EM GL N T T
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 198/392 (50%), Gaps = 6/392 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G CK GSL A ++++ LM +V P+ +YN +ING C G + E++ M
Sbjct: 281 LVYGYCKLGSLKEAFQIVE---LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+P V TY TLIDG G E+ +L ++M G+ N V +N L WL + E
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 135 EASKVLSDMIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++ + +++D H PD +Y L + + G L+ AL++ ++ + + + +LN +
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
L+ +CK S RG D T T+I G + EKAL +++ M K+
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
P ++ +NS I GLC T++A DEL + LL D +TFN++I GY G++++AF
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
E + T N L+N LCK G E+A +I + D +TY T+I+ F
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFC 636
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
K +E L M KG+ PD+ TY++ ++
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 194/387 (50%), Gaps = 4/387 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL++G C G L+ AL ++++M ++ V P++V+YN+I+ KKG L +E+L DM
Sbjct: 209 VLVNGYCLEGKLEDALGMLERM--VSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G P+ TY L+ GY + GSL+E+ ++ + M + + P++ YN ++ L G M
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSM 326
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
E +++ M + PD +Y L +G G EA KL Q+ + + + NI
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNIS 386
Query: 194 LNYICKSXXXXXXXXXXGSMI-TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L ++CK ++ G PD+ T T+I K+G+ AL + M +
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK-LLDATTFNTLISGYSNSGQIDEAF 311
+ N N+ ++ LCK D A NL++ KR ++D T+ TLI G+ ++++A
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKAL 506
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+ EMK + ++ T+N+LI LC +G E A E + G+ PD T+ ++I +
Sbjct: 507 EMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKT 398
K+ E+ ++ I PD T
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKPDNYT 593
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 168/338 (49%), Gaps = 4/338 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+DG + G L+L+ K M M + V N V++N + CK+ + ++
Sbjct: 350 TLIDGCFELG---LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406
Query: 74 VKA-GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
V GF P + TY TLI Y + G L +L + EM ++G+ N + N+IL L +
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
++EA +L+ + D+ +Y L G R + +AL++ +++ K + + N
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L+ +C + GL PD T ++I G CK G EKA YN IK
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG 312
+P+ N +NGLCK T+ A N + L + + +D T+NT+IS + ++ EA+
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYD 646
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 350
L +EM+ GL +R TYN+ I+LL ++G E EL+K
Sbjct: 647 LLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 159/369 (43%), Gaps = 41/369 (11%)
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD---MEEA 136
PS + + Y G +L++ +M+ L PN++ N++L L R+ + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 137 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL-KLHNQILKFDLIEDAFSLNILLN 195
+V DM+ + + ++ +L G C G L +AL L + +F + D + N +L
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+ K M GL P+ T ++ G CKLG+ ++A ++ M + + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLT 314
+L YN INGLC S L+D ++ KL D T+NTLI G G EA L
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 315 TEMKSLGLSANRVT------------------------------------YNTLINLLCK 338
+M++ G+ AN+VT Y+TLI K
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
G A E+M+ M +GI+ + IT T++ K+ +E L + +G I D+ T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 399 YDAIVTPFL 407
Y ++ F
Sbjct: 489 YGTLIMGFF 497
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 200/390 (51%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K DL + + +KM + + N +YN +IN FC++ + LA +LG M+
Sbjct: 91 LLSAIAKMKKFDLVISLGEKMQRL---GISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+EPS+ T ++L++GY + +++ L D+MVE G P+ + + ++++ L+ H
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M+ + P+ +Y ++ GLC+ G + A L N++ + + + ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK M +G+ P+V T +++I C A RL + MI+
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PN+ +N+ I+ K A+ L DE+ KR + D T+++LI+G+ ++DEA +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M S N VTYNTLIN CK +E EL + M +G+ + +TYTTLI F +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + M+ GV P+ TY+ ++
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 185/370 (50%), Gaps = 36/370 (9%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M PN V+Y ++NG CK+G + LA +L M A E +V Y+T+ID ++
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+++L L EM +G+ PN++ Y+S++ L + +AS++LSDMI++ I P+ ++
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + + G L EA KL+++ MI R
Sbjct: 336 LIDAFVKEGKLVEAEKLYDE-----------------------------------MIKRS 360
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ PD++T +++I+G C ++A ++ MI D PN+ YN+ ING CK D
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 278 NLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L E+ +R L+ T T+ TLI G+ + D A + +M S G+ N +TYNTL++ L
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CKNG E+A + + + + P TY +I K E+ L + LKGV PD
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Query: 397 KTYDAIVTPF 406
Y+ +++ F
Sbjct: 541 IIYNTMISGF 550
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 162/341 (47%), Gaps = 33/341 (9%)
Query: 14 VLLDGACKTGSLDLALKVMKKM-----------------------------NLMT---GN 41
V+++G CK G +DLA ++ KM NL T
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 42 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 101
V PN ++Y+S+I+ C A +L DM++ P+V T+ LID + + G L E+
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
+L DEM++R + P+I Y+S++ H ++EA + MI K P+ +Y L G
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 162 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 221
C+ + E ++L ++ + L+ + + L++ ++ M++ G+ P+
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
+ T T++DG CK G EKA+ ++ + + +P + YN I G+CK + +L
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 282 ELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
L + + D +NT+ISG+ G +EA L +M+ G
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 169/371 (45%), Gaps = 1/371 (0%)
Query: 40 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 99
G + S Y I+ L A + G MVK+ PS+ + L+ A+ +
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
+ L ++M G+ N+ YN ++ R + A +L M+ P + + L
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
G C +++A+ L +Q+++ D + L++ + M+ RG
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
P++ T V++G CK G+ + A L N M + N+ IY++ I+ LCK D A NL
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 280 VDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
E+ + + + T+++LIS N + +A L ++M ++ N VT+N LI+ K
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
G EA++L MI + I PD TY++LI F +E + + MI K P+ T
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 399 YDAIVTPFLLA 409
Y+ ++ F A
Sbjct: 403 YNTLINGFCKA 413
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 7 GGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 66
G + L+ G + D A V K+M + V PN ++YN++++G CK G L A
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQM---VSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 67 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 126
V + ++ EP++ TY +I+G + G +E+ L + +G+ P++++YN+++
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 127 LYRHGDMEEASKVLSDMIDKHICPDQ 152
R G EEA + M + PD
Sbjct: 550 FCRKGLKEEADALFRKMREDGPLPDS 575
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 192/367 (52%), Gaps = 2/367 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + V PN +YN ++NG+CK G + A + + +V+AG +P TY +LI GY +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
L+ + ++ +EM +G N V Y +++ L ++EA + M D P +Y +
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + LC + +EAL L ++ + + + + +L++ +C G M+ +G
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
L P+V T +I+G CK G E A+ + M PN YN I G CK ++ A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAM 447
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+++++ +RK+L D T+N+LI G SG D A+ L + M GL ++ TY ++I+ L
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK+ EEA +L + +G+ P+ + YT LI + K +E + + M+ K +P+
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 397 KTYDAIV 403
T++A++
Sbjct: 568 LTFNALI 574
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 184/361 (50%), Gaps = 2/361 (0%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
YN+++N + G + ++V +M++ P++ TY +++GY + G++EE+ + ++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
E GL P+ Y S++ + D++ A KV ++M K ++ +Y L GLC +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 229
EA+ L ++ + + +L+ +C S M G+ P+++T +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 289
D C EKA L M++ PN+ YN+ ING CK + A ++V+ + RKL
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 290 DAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
T T+N LI GY S + +A G+ +M + + VTYN+LI+ C++G + A L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 349 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
+ +M +G+ PD TYT++I K EE L D + KGV P+ Y A++ +
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 409 A 409
A
Sbjct: 545 A 545
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 183/393 (46%), Gaps = 5/393 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G C+ LD A KV +M L N V+Y +I+G C + A ++ M
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPL---KGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
P+VRTY LI E+L L EM E G+ PNI Y ++ L E
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A ++L M++K + P+ +Y L G C+ G + +A+ + + L + + N L+
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
CKS M+ R + PDV T ++IDG C+ GN + A RL + M
Sbjct: 436 KGYCKSNVHKAMGVL-NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
P+ Y S I+ LCK + A +L D L ++ + + + LI GY +G++DEA +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+M S N +T+N LI+ LC +G +EA L + M+ G++P T T LI K
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ + M+ G PD TY + +
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 185/412 (44%), Gaps = 30/412 (7%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G CK+ K M +N M V P+ V+YNS+I+G C+ G A +L M
Sbjct: 434 LIKGYCKSN----VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G P TY ++ID + +EE+ L D + ++G+ PN+V+Y +++ + G ++
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA +L M+ K+ P+ ++ L GLC +G L EA L +++K L + IL+
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE- 253
+ + K M++ G PD +T T I C+ G + L + M KM E
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREG---RLLDAEDMMAKMREN 666
Query: 254 --QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLIS----------- 299
P+L Y+S I G + T+ A +++ +R + TF +LI
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK 726
Query: 300 -------GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
SN + D L +M ++ N +Y LI +C+ G A+++ M
Sbjct: 727 GSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 353 IM-QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+GI P + + L++ K E + D MI G +P ++ ++
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 163/375 (43%), Gaps = 23/375 (6%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+DG CK G +D A +++KM + PNS+++N++I+G C G L A + M
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKM---LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
VK G +P+V T LI + G + + +M+ G P+ Y + + R G +
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEG---LCRNGYLTEALKL-------HNQILKFDL 183
+A +++ M + + PD ++Y+ L +G L + + + LK +Q L
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 184 IEDAFSLNI--------LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 235
I+ + L + M+ + P+ + +I G C++
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 236 GNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKLLDATT 293
GN A ++++ M + + P+ ++N+ ++ CK+ + A +VD++ L +
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Query: 294 FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI 353
LI G G+ + + + G + + + +I+ + K G E EL +M
Sbjct: 834 CKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Query: 354 MQGIRPDCITYTTLI 368
G + TY+ LI
Sbjct: 894 KNGCKFSSQTYSLLI 908
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 124/280 (44%), Gaps = 26/280 (9%)
Query: 153 YSYAILTEGLCRNGYLTEALKLHNQILK-FDLIEDA---------------FSL------ 190
YSYA L L NGY+ K+ ++K D + DA F L
Sbjct: 124 YSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLII 183
Query: 191 ---NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
N LLN + + M+ + P++YT +++G CKLGN E+A + +
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKLLDATTFNTLISGYSNSGQ 306
+++ P+ Y S I G C+ D A + +E+ K + + LI G + +
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
IDEA L +MK TY LI LC + EA L+K M GI+P+ TYT
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
LI + E+ L M+ KG++P+ TY+A++ +
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 120/307 (39%), Gaps = 57/307 (18%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ K G D A ++M L +G P++ +Y + I +C++G LL AE+++ M
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQM-LSSGTK--PDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY--RHG 131
+ G P + TY++LI GY G + + M + G P+ + S++ L ++G
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYG 723
Query: 132 ----------------DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 175
+ + ++L M++ + P+ SY L G+C G L A K+
Sbjct: 724 KQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVF 783
Query: 176 NQILKFDLIEDA-FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV----------YT 224
+ + + + I + N LL+ CK MI G P + Y
Sbjct: 784 DHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYK 843
Query: 225 KAT-------------------------VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
K +IDG K G E L+N M K + +
Sbjct: 844 KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQT 903
Query: 260 YNSFING 266
Y+ I G
Sbjct: 904 YSLLIEG 910
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 206/388 (53%), Gaps = 12/388 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LL+ C+ L LAL + KM + G+ P+ V++ S++NGFC+ + A + M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKM-IKLGHE--PSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V G++P+V Y T+IDG + ++ +L L + M + G+ P++V YNS++ L G
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A++++S M + I PD +++ L + + G ++EA + + ++++ L D + ++L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +C G M+++G PDV T + +I+G CK E ++L+ M +
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-----DATTFNTLISGYSNSGQID 308
N Y I G C+ +VA +E+ +R + + T+N L+ G ++G+I+
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVA----EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+A + +M+ G+ A+ VTYN +I +CK G +A ++ + QG+ PD TYTT++
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQ 396
KK E AL M G++P++
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 198/390 (50%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K D+ + + ++M ++ + N + N ++N FC+ L LA LG M+
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQML---GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G EPS+ T+ +L++G+ R + ++L + D+MV G PN+V+YN+I+ L + ++
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A +L+ M I PD +Y L GLC +G ++A ++ + + K ++ D F+ N L+
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ K MI R L PD+ T + +I G C ++A ++ M+
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGL 313
P++ Y+ ING CK + L E+ +R ++ T T+ LI GY +G+++ A +
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M G+ N +TYN L++ LC NG E+A ++ M G+ D +TY +I K
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ ++ + +G++PD TY ++
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 1/304 (0%)
Query: 104 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 163
+C R + N Y +L R ++++ + M+ P ++ L +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 223
+ + L Q+ + + + NILLN C+ G MI G P +
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
T ++++G C+ AL +++ M+ M +PN+ IYN+ I+GLCK D A +L++ +
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 284 RKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
K + D T+N+LISG +SG+ +A + + M + + T+N LI+ K G
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
EA+E + MI + + PD +TY+ LI +E + +M+ KG PD TY +
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 403 VTPF 406
+ +
Sbjct: 333 INGY 336
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 149/341 (43%), Gaps = 7/341 (2%)
Query: 76 AGFEPSVRTYAT------LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
GF S R Y+ ++ R+ L++SL L MV+ P+I ++ +L + +
Sbjct: 34 CGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK 93
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
+ + M I + + IL CR L+ AL +++K +
Sbjct: 94 MKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVT 153
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
LLN C+ M+ G P+V T+IDG CK + AL L N M
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQID 308
K P++ YNS I+GLC A +V + KR++ D TFN LI G++
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
EA EM L + VTY+ LI LC +EA+E+ M+ +G PD +TY+ LI
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
+ K E + L M +GV+ + TY ++ + A
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 148/332 (44%), Gaps = 1/332 (0%)
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
MV+ PS+ ++ L+ ++ + + L ++M G+ N+ N +L R
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+ A L MI P ++ L G CR + +AL + +Q++ + N
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
+++ +CKS M G+ PDV T ++I G C G A R+ + M K +
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
P++ +N+ I+ K A+ +E+ +R L D T++ LI G ++DEA
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+ M S G + VTY+ LIN CK+ E +L M +G+ + +TYT LI +
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + M+ GV P+ TY+ ++
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 189/383 (49%), Gaps = 4/383 (1%)
Query: 22 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 81
+G D A KV +M + P+ S+ + FCK A +L +M G E +
Sbjct: 124 SGYFDQAHKVYMRMR---DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMN 180
Query: 82 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 141
V Y T++ G+ E L +M+ G+ + +N +L L + GD++E K+L
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 142 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 201
+I + + P+ ++Y + +GLC+ G L A+++ +++ D + N L+ +CK+
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Query: 202 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 261
G M+ GL PD YT T+I G CK G + A R+ + P+ Y
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYR 360
Query: 262 SFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
S I+GLC T+ A L +E L K + +NTLI G SN G I EA L EM
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Query: 321 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 380
GL T+N L+N LCK GC +A L+K+MI +G PD T+ LI ++ + E
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 381 IALHDYMILKGVIPDQKTYDAIV 403
+ + D M+ GV PD TY++++
Sbjct: 481 LEILDVMLDNGVDPDVYTYNSLL 503
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 192/395 (48%), Gaps = 5/395 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+ + G C+ G LD A++++ + P+ ++YN++I G CK AE LG M
Sbjct: 256 LFIQGLCQRGELDGAVRMV---GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V G EP TY TLI GY + G ++ + R+ + V G P+ Y S++ L G+
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A + ++ + K I P+ Y L +GL G + EA +L N++ + LI + + NIL
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N +CK MI++G PD++T +I G E AL + + M+
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 254 QPNLTIYNSFINGLCKMAS-TDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG 312
P++ YNS +NGLCK + DV + + K + TFN L+ ++DEA G
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM-KMMIMQGIRPDCITYTTLITHF 371
L EMK+ ++ + VT+ TLI+ CKNG + A L KM + TY +I F
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+K + L M+ + + PD TY +V F
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 194/385 (50%), Gaps = 4/385 (1%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
CKT AL+++ N M+ N V+Y +++ GF ++ E+ G M+ +G
Sbjct: 157 CKTSRPHAALRLL---NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS 213
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
+ T+ L+ + G ++E +L D++++RG+ PN+ YN + L + G+++ A ++
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
+ +I++ PD +Y L GLC+N EA +++ L D+++ N L+ CK
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
G + G PD +T ++IDG C G T +AL L+N + +PN+ +
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 318
YN+ I GL A L +E+ ++ L+ + TFN L++G G + +A GL M
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
S G + T+N LI+ E A E++ +M+ G+ PD TY +L+ K E
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 379 EVIALHDYMILKGVIPDQKTYDAIV 403
+V+ + M+ KG P+ T++ ++
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILL 538
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 197/418 (47%), Gaps = 40/418 (9%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G CK A + KM + P+S +YN++I G+CK G + LAE ++GD V
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKM---VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
GF P TY +LIDG G +L L +E + +G+ PN+++YN+++ L G +
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA+++ ++M +K + P+ ++ IL GLC+ G +++A L ++ D F+ NIL+
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ M+ G+ PDVYT ++++G CK E + Y M++
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PNL +N + LC+ D A L++E++ + + DA TF TLI G+ +G +D A+ L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 314 TTEMK-SLGLSANRVTYNTLI-----------------------------------NLLC 337
+M+ + +S++ TYN +I + C
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
K G + + M+ G P T +I + E + M+ KG++P+
Sbjct: 649 KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 178/376 (47%), Gaps = 14/376 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG C G + AL + N G + PN + YN++I G +G +L A ++ +M
Sbjct: 362 LIDGLCHEGETNRALALF---NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P V+T+ L++G + G + ++ L M+ +G FP+I +N +++ ME
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A ++L M+D + PD Y+Y L GLC+ + ++ + +++ + F+ NILL
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+C+ M + + PD T T+IDG CK G+ + A L+ KM+E
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR---KMEEA 595
Query: 255 PNLT----IYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 309
++ YN I+ + + +A+ L E+ R L D T+ ++ G+ +G ++
Sbjct: 596 YKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNL 655
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
+ EM G + T +IN LC EA ++ M+ +G+ P+ + I
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV---NTIC 712
Query: 370 HFNKKHHPEEVIALHD 385
+KK + L D
Sbjct: 713 DVDKKEVAAPKLVLED 728
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 186/413 (45%), Gaps = 38/413 (9%)
Query: 29 LKVMKKMNLMTGNSVWPNSVS-YNSIINGFCKKGGLLLAEEVLGDMVK-AGFEPSVRTYA 86
+K ++ N M + +++S Y S+I G EEVL DM + G Y
Sbjct: 21 MKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYV 80
Query: 87 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 146
+ Y R G ++E++ + + M P + YN+I+ L G ++A KV M D+
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 147 HICPDQYSYAILTEGLCRNGYLTEALKLHN----QILKFDLI----------EDAF---- 188
I PD YS+ I + C+ AL+L N Q + +++ E+ F
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 189 -----------------SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 231
+ N LL +CK +I RG+ P+++T I G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 232 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LD 290
C+ G + A+R+ +I+ +P++ YN+ I GLCK + A+ + ++ L D
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 291 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 350
+ T+NTLI+GY G + A + + G ++ TY +LI+ LC G A L
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 351 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ +GI+P+ I Y TLI + + E L + M KG+IP+ +T++ +V
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 4/277 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L++G CK G + A ++K +M +P+ ++N +I+G+ + + A E+L M
Sbjct: 431 ILVNGLCKMGCVSDADGLVK---VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G +P V TY +L++G + E+ + MVE+G PN+ +N +L L R+ +
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK-FDLIEDAFSLNI 192
+EA +L +M +K + PD ++ L +G C+NG L A L ++ + + + + NI
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNI 607
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
+++ + M+ R L PD YT ++DG CK GN + M++
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 289
P+LT IN LC A ++ + ++ L+
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 6/301 (1%)
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM---IDKHICPDQYSYAILTEGLCRNG 166
E G + Y S++ L +G E +VL DM + H+ Y A+ G R G
Sbjct: 33 EVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYG--RKG 90
Query: 167 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 226
+ EA+ + ++ +D FS N +++ + S M RG+ PDVY+
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
+ CK ALRL N M + N+ Y + + G + L ++
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS 210
Query: 287 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
+ L +TFN L+ G + E L ++ G+ N TYN I LC+ G + A
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 346 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 405
++ +I QG +PD ITY LI K +E M+ +G+ PD TY+ ++
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 406 F 406
+
Sbjct: 331 Y 331
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 187/366 (51%), Gaps = 8/366 (2%)
Query: 8 GCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 63
GC + V +++G CK G +DLAL ++KKM + + V YN+II+G CK +
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME---KGKIEADVVIYNTIIDGLCKYKHM 274
Query: 64 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 123
A + +M G P V TY++LI +G ++ RL +M+ER + PN+V ++++
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 124 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
+ + G + EA K+ +MI + I PD ++Y+ L G C + L EA + ++ D
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
+ + + L+ CK+ M RGL + T T+I G + + + A
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYS 302
++ M+ + PN+ YN ++GLCK A + + L++ + D T+N +I G
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
+G++++ + L + G+S N + YNT+I+ C+ G EEA L+K M G P+
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 363 TYTTLI 368
TY TLI
Sbjct: 575 TYNTLI 580
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 197/390 (50%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K +L + + ++M + + + +Y+ IN FC++ L LA VL M+
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTL---GISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+EP + T ++L++GY + +++ L D+MVE G P+ + ++++ L+ H
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M+ + PD +Y + GLC+ G + AL L ++ K + D N ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK M +G+ PDV+T +++I C G A RL + MI+
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PN+ +++ I+ K A+ L DE+ KR + D T+++LI+G+ ++DEA +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M S N VTY+TLI CK EE EL + M +G+ + +TYTTLI F +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + M+ GV P+ TY+ ++
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 199/392 (50%), Gaps = 6/392 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+ ++ C+ L LAL V+ KM + P+ V+ +S++NG+C + A ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKL---GYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ G++P T+ TLI G E++ L D+MV+RG P++V Y +++ L + GD+
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A +L M I D Y + +GLC+ ++ +AL L ++ + D F+ + L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ +C MI R + P+V T + +ID K G +A +LY+ MIK
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVD-ELRKRKLLDATTFNTLISGYSNSGQIDEAFG 312
P++ Y+S ING C D AK++ + + K + T++TLI G+ + +++E
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 313 LTTEMKSLGLSANRVTYNTLIN-LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
L EM GL N VTY TLI+ CD A+ + K M+ G+ P+ +TY L+
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCD-NAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K + + + +Y+ + PD TY+ ++
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 194/371 (52%), Gaps = 1/371 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M P+ V+Y +++NG CK+G + LA +L M K E V Y T+IDG ++
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++++L L EM +G+ P++ Y+S++ L +G +AS++LSDMI++ I P+ +++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + + G L EA KL+++++K + D F+ + L+N C MI++
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
P+V T +T+I G CK E+ + L+ M + N Y + I+G + D A+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+ ++ + + T+N L+ G +G++ +A + ++ + + TYN +I +
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK G E+ EL + ++G+ P+ I Y T+I+ F +K EE +L M G +P+
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 397 KTYDAIVTPFL 407
TY+ ++ L
Sbjct: 574 GTYNTLIRARL 584
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 178/350 (50%), Gaps = 4/350 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG CK +D AL + +M+ + P+ +Y+S+I+ C G A +L DM+
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMD---NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ P+V T++ LID + + G L E+ +L DEM++R + P+I Y+S++ H ++
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA + MI K P+ +Y+ L +G C+ + E ++L ++ + L+ + + L+
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ ++ M++ G+ P++ T ++DG CK G KA+ ++ + + +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P++ YN I G+CK + L L + + + +NT+ISG+ G +EA L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
+MK G N TYNTLI ++G E + EL+K M G D T
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 158/312 (50%), Gaps = 1/312 (0%)
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+++++ L +MV+ FP+IV +N +L + + E + M I D Y+Y+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
CR L+ AL + +++K D +L+ LLN C S M+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
PD +T T+I G +A+ L + M++ QP+L Y + +NGLCK D+A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+L+ ++ K K+ D +NT+I G +D+A L TEM + G+ + TY++LI+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C G +A L+ MI + I P+ +T++ LI F K+ E L+D MI + + PD
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 397 KTYDAIVTPFLL 408
TY +++ F +
Sbjct: 364 FTYSSLINGFCM 375
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 170/345 (49%), Gaps = 1/345 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A ++ GDMVK+ PS+ + L+ A+ E + L ++M G+ ++ Y+ +
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R + A VL+ M+ PD + + L G C + +++A+ L +Q+++
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D F+ L++ + M+ RG PD+ T TV++G CK G+ + AL L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 304
M K + ++ IYN+ I+GLCK D A NL E+ + + D T+++LIS N
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G+ +A L ++M ++ N VT++ LI+ K G EA++L MI + I PD TY
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
++LI F +E + + MI K P+ TY ++ F A
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 177/373 (47%), Gaps = 1/373 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + +P+ V +N +++ K L + M G + TY+ I+ + R
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
L +L + +M++ G P+IV +S+L + +A ++ M++ PD +++
Sbjct: 134 LSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTT 193
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L GL + +EA+ L +Q+++ D + ++N +CK M
Sbjct: 194 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ DV T+IDG CK + + AL L+ M +P++ Y+S I+ LC A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L+ ++ +RK+ + TF+ LI + G++ EA L EM + + TY++LIN
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C + +EAK + ++MI + P+ +TY+TLI F K EE + L M +G++ +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 397 KTYDAIVTPFLLA 409
TY ++ F A
Sbjct: 434 VTYTTLIHGFFQA 446
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 153/299 (51%), Gaps = 5/299 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+D K G L A K+ +M S+ P+ +Y+S+INGFC L A+ + M
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEM---IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ P+V TY+TLI G+ + +EE + L EM +RGL N V Y ++++ ++ D
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A V M+ + P+ +Y IL +GLC+NG L +A+ + + + + D ++ NI+
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +CK+ ++ +G+ P+V T+I G C+ G+ E+A L M +
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
PN YN+ I + + + L+ E+R DA+T L++ + G++D++F
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 627
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 213/459 (46%), Gaps = 77/459 (16%)
Query: 15 LLDGACKTGSLDLALKV---MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 71
+LD K G L+ K+ MK+ N+ + V+YN +INGF K G + A G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEF------SEVTYNILINGFSKNGKMEEARRFHG 297
Query: 72 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP---------------- 115
DM ++GF + ++ LI+GY + G +++ + DEM+ G++P
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 116 ---------------NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 160
++V YN++++ + G EAS + D+ I P +Y L +
Sbjct: 358 RIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 161 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 220
GLC +G L A +L ++ + D + L+ K+ M+ +G+ P
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ-PNLTIYNSFINGLCKMAST------ 273
D Y T G +LG+++KA RL+ M+ D P+LTIYN I+GLCK+ +
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 274 -----------------------------DVAKNLVDE-LRKRKLLDATTFNTLISGYSN 303
+A+NL DE LRKR T+ LI G++
Sbjct: 538 QRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK 597
Query: 304 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
+G++++AF +TEMK G+ N +T+N L+ +CK G +EA + M +GI P+ +
Sbjct: 598 AGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYS 657
Query: 364 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
YT LI+ EEV+ L+ M+ K + PD T+ A+
Sbjct: 658 YTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 152/327 (46%), Gaps = 38/327 (11%)
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M++ GF PSVR ++ + ++ + + M+E G+ P ++ +N++L ++ GD
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+E K+ +M ++I + +Y IL G +NG + EA + H
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH----------------- 296
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
G M G Y+ +I+G CK G + A + + M+
Sbjct: 297 ------------------GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG 312
P + YN +I LC D A+ L+ + D ++NTL+ GY G+ EA
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSM---AAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L ++++ + + VTYNTLI+ LC++G E A+ L + M Q I PD ITYTTL+ F
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTY 399
K + ++D M+ KG+ PD Y
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAY 482
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 167/375 (44%), Gaps = 41/375 (10%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A V M++ G P+V T+ T++D + G LE ++ EM R + + V YN ++
Sbjct: 222 ASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILIN 281
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
++G MEEA + DM YS+ L EG C+ G +A + +++L +
Sbjct: 282 GFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYP 341
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
+ NI + +C SM PDV + T++ G K+G +A L+
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLF 397
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 304
+ + D P++ YN+ I+GLC+ + + A+ L +E+ + + D T+ TL+ G+ +
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 305 GQI-----------------------------------DEAFGLTTEMKSLGLSANRVT- 328
G + D+AF L EM + A +T
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 329 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 388
YN I+ LCK G +A E + + G+ PD +TYTT+I + + + L+D M+
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 389 LKGVIPDQKTYDAIV 403
K + P TY ++
Sbjct: 578 RKRLYPSVITYFVLI 592
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V +DG CK G+L A++ +K+ + + P+ V+Y ++I G+ + G +A + +M
Sbjct: 520 VRIDGLCKVGNLVKAIEFQRKIFRV---GLVPDHVTYTTVIRGYLENGQFKMARNLYDEM 576
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++ PSV TY LI G+A+ G LE++ + EM +RG+ PN++ +N++LY + + G++
Sbjct: 577 LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI 636
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA + L M ++ I P++YSY +L C E +KL+ ++L ++ D ++ L
Sbjct: 637 DEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Query: 194 LNYICK 199
++ K
Sbjct: 697 FKHLEK 702
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 197/391 (50%), Gaps = 4/391 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L++G CK +D A +V+ +M P++V+YN +I C +G L LA +VL +
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMR---SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ +P+V TY LI+ G ++E+L+L DEM+ RGL P++ YN+I+ + + G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A +++ ++ K PD SY IL L G E KL ++ + + +IL
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +C+ M +GL PD Y+ +I C+ G + A+ MI
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
P++ YN+ + LCK D A + +L + +++++NT+ S +SG A
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
+ EM S G+ + +TYN++I+ LC+ G +EA EL+ M P +TY ++ F
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K H E+ I + + M+ G P++ TY ++
Sbjct: 520 KAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 192/391 (49%), Gaps = 13/391 (3%)
Query: 19 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 78
+C++G+ +L +++ M N P+ + +I GF + A V+ + K G
Sbjct: 99 SCRSGNYIESLHLLETMVRKGYN---PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG- 154
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
+P V Y LI+G+ + ++++ R+ D M + P+ V YN ++ L G ++ A K
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
VL+ ++ + P +Y IL E G + EALKL +++L L D F+ N ++ +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
K ++ +G PDV + ++ G E+ +L M PN+
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEM 317
Y+ I LC+ + A NL+ ++++ L DA +++ LI+ + G++D A M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 377
S G + V YNT++ LCKNG ++A E+ + G P+ +Y T+ +
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG-- 452
Query: 378 EEVIALHDYMILK----GVIPDQKTYDAIVT 404
+++ ALH MIL+ G+ PD+ TY+++++
Sbjct: 453 DKIRALH--MILEMMSNGIDPDEITYNSMIS 481
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 169/353 (47%), Gaps = 2/353 (0%)
Query: 53 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 112
I + C+ G + + +L MV+ G+ P V LI G+ ++ +++R+ E++E+
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153
Query: 113 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 172
P++ YN+++ + +++A++VL M K PD +Y I+ LC G L AL
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 173 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 232
K+ NQ+L + + IL+ M++RGL PD++T T+I G
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 233 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDA 291
CK G ++A + + +P++ YN + L + + L+ ++ K +
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 292 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 351
T++ LI+ G+I+EA L MK GL+ + +Y+ LI C+ G + A E ++
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 352 MIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
MI G PD + Y T++ K ++ + + + G P+ +Y+ + +
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 3/239 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ C+ G ++ A+ ++K LM + P++ SY+ +I FC++G L +A E L M
Sbjct: 338 ILITTLCRDGKIEEAMNLLK---LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G P + Y T++ + G +++L + ++ E G PN YN++ L+ GD
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A ++ +M+ I PD+ +Y + LCR G + EA +L + + + NI+
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L CK+ SM+ G P+ T +I+G G +A+ L N ++++D
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 7/185 (3%)
Query: 6 SGGCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 61
S GC+ + V +L CK G D AL++ K+ + PNS SYN++ + G
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV---GCSPNSSSYNTMFSALWSSG 452
Query: 62 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 121
+ A ++ +M+ G +P TY ++I R G ++E+ L +M P++V YN
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 122 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 181
+L + +E+A VL M+ P++ +Y +L EG+ GY EA++L N +++
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Query: 182 DLIED 186
D I +
Sbjct: 573 DAISE 577
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 186/356 (52%), Gaps = 4/356 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++++ C+ L A M K+ + P++V +N+++NG C + + A E++ M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKL---GYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ G +P++ T TL++G G + +++ L D MVE G PN V Y +L + + G
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A ++L M +++I D Y+I+ +GLC++G L A L N++ D + N L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ C + MI R + P+V T + +ID K G +A +L M++
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
PN YNS I+G CK + A +VD + + D TFN LI+GY + +ID+
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
L EM G+ AN VTYNTL+ C++G E AK+L + M+ + +RPD ++Y L+
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 185/355 (52%), Gaps = 4/355 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+L+ CK+G LA+++++KM ++ ++V Y+ II+G CK G L A + +M
Sbjct: 234 VLNVMCKSGQTALAMELLRKME---ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 290
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
GF+ + TY TLI G+ G ++ +L +M++R + PN+V ++ ++ + G +
Sbjct: 291 IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR 350
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++L +M+ + I P+ +Y L +G C+ L EA+++ + ++ D + NIL+
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N CK+ M RG+ + T T++ G C+ G E A +L+ M+ +
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
P++ Y ++GLC + A + ++ K K+ LD + +I G N+ ++D+A+ L
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+ G+ + YN +I+ LC+ +A L + M +G PD +TY LI
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 182/360 (50%), Gaps = 4/360 (1%)
Query: 10 IKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 69
+K +++DG CK GSLD A + +M + + ++YN++I GFC G ++
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEI---KGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 70 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
L DM+K P+V T++ LID + + G L E+ +L EM++RG+ PN + YNS++ +
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
+EEA +++ MI K PD ++ IL G C+ + + L+L ++ +I + +
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
N L+ C+S M++R + PD+ + ++DG C G EKAL ++ +
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
K + ++ IY I+G+C + D A +L L + + LDA +N +IS +
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+A L +M G + + +TYN LI + A EL++ M G D T +I
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 197/394 (50%), Gaps = 4/394 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G C G + A+ ++ +M + TG PN V+Y ++N CK G LA E+L M
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRM-VETG--FQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ + Y+ +IDG + GSL+ + L +EM +G +I+ YN+++ G +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+ +K+L DMI + I P+ ++++L + + G L EA +L ++++ + + + N L+
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ CK MI++G PD+ T +I+G CK + L L+ M
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
N YN+ + G C+ +VAK L E+ R++ D ++ L+ G ++G++++A +
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+++ + + Y +I+ +C ++A +L + ++G++ D Y +I+ +
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
K + L M +G PD+ TY+ ++ L
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTYNILIRAHL 589
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 180/370 (48%), Gaps = 1/370 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + P + +N + + K L + M G S+ T + +I+ + R
Sbjct: 79 MIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRK 138
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
L + ++++ G P+ V++N++L L + EA +++ M++ P +
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L GLC NG +++A+ L +++++ + + +LN +CKS M R
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ D + +IDG CK G+ + A L+N M + ++ YN+ I G C D
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L+ ++ KRK+ + TF+ LI + G++ EA L EM G++ N +TYN+LI+
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK EEA +++ +MI +G PD +T+ LI + K + ++ + L M L+GVI +
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 397 KTYDAIVTPF 406
TY+ +V F
Sbjct: 439 VTYNTLVQGF 448
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 171/342 (50%), Gaps = 1/342 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A ++ DM+++ P+V + L A+ E L LC +M +G+ +I + ++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R + A + ++ PD + L GLC ++EAL+L +++++
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
+LN L+N +C + M+ G P+ T V++ CK G T A+ L
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNS 304
M + + + + Y+ I+GLCK S D A NL +E+ + D T+NTLI G+ N+
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G+ D+ L +M +S N VT++ LI+ K G EA +L+K M+ +GI P+ ITY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+LI F K++ EE I + D MI KG PD T++ ++ +
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 1/309 (0%)
Query: 99 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
++++ L +M++ P ++ +N + + + E + M K I Y+ +I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
CR L+ A +I+K D N LLN +C M+ G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
P + T T+++G C G A+ L + M++ QPN Y +N +CK T +A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 279 LVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
L+ ++ +R + LDA ++ +I G G +D AF L EM+ G A+ +TYNTLI C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
G ++ +L++ MI + I P+ +T++ LI F K+ E L M+ +G+ P+
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 398 TYDAIVTPF 406
TY++++ F
Sbjct: 370 TYNSLIDGF 378
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 153/299 (51%), Gaps = 5/299 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+D K G L A +++K+M + PN+++YNS+I+GFCK+ L A +++ M
Sbjct: 338 VLIDSFVKEGKLREADQLLKEM---MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G +P + T+ LI+GY + +++ L L EM RG+ N V YN+++ + G +
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
E A K+ +M+ + + PD SY IL +GLC NG L +AL++ +I K + D I+
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ +C + S+ +G+ D +I C+ + KA L+ M +
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
P+ YN I A L++E++ D +T +I+ S SG++D++F
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS-SGELDKSF 632
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%)
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 315
NL+ + +GL + + D D ++ R L FN L S + + Q + L
Sbjct: 53 NLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCK 112
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
+M+S G++ + T + +IN C+ A M ++ G PD + + TL+ +
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
E + L D M+ G P T + +V L
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 191/368 (51%), Gaps = 1/368 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + PN V+YN++INGF +G +L+A ++L +M+ G P+ T+ LIDG+ G+
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+E+L++ M +GL P+ V Y +L L ++ + + A M +C + +Y
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ +GLC+NG+L EA+ L N++ K + D + + L+N CK + G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
L P+ +T+I C++G ++A+R+Y MI + +N + LCK A+
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 278 NLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+ + +L T +F+ LI+GY NSG+ +AF + EM +G TY +L+ L
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK G EA++ +K + D + Y TL+T K + + ++L M+ + ++PD
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688
Query: 397 KTYDAIVT 404
TY ++++
Sbjct: 689 YTYTSLIS 696
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 191/390 (48%), Gaps = 4/390 (1%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+ G + +L++ + M L N P+ + N+I+ K G + L +M+K P
Sbjct: 175 REGMIQDSLEIFRLMGLYGFN---PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICP 231
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
V T+ LI+ GS E+S L +M + G P IV YN++L+W + G + A ++L
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
M K + D +Y +L LCR+ + + L + K + + + N L+N
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 351
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M++ GL P+ T +IDG+ GN ++AL+++ M P+ Y
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
++GLCK A D+A+ +++ + + T+ +I G +G +DEA L EM
Sbjct: 412 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
G+ + VTY+ LIN CK G + AKE++ + G+ P+ I Y+TLI + + +E
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 380 VIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
I +++ MIL+G D T++ +VT A
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCKA 561
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 174/370 (47%), Gaps = 1/370 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + P+ ++N +IN C +G + ++ M K+G+ P++ TY T++ Y + G
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+ ++ L D M +G+ ++ YN +++ L R + + +L DM + I P++ +Y
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L G G + A +L N++L F L + + N L++ M +G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
L P + ++DG CK + A Y M + Y I+GLCK D A
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L++E+ K + D T++ LI+G+ G+ A + + +GLS N + Y+TLI
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C+ GC +EA + + MI++G D T+ L+T K E M G++P+
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 397 KTYDAIVTPF 406
++D ++ +
Sbjct: 584 VSFDCLINGY 593
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 187/427 (43%), Gaps = 40/427 (9%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VLLDG CK DLA +M N V ++Y +I+G CK G L A +L +M
Sbjct: 413 VLLDGLCKNAEFDLARGFYMRMKR---NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G +P + TY+ LI+G+ + G + + + + GL PN ++Y++++Y R G +
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA ++ MI + D +++ +L LC+ G + EA + + ++ + S + L
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG---------------------- 231
+N S M G P +T +++ G
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 649
Query: 232 -------------NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
CK GN KA+ L+ M++ P+ Y S I+GLC+ T +A
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 709
Query: 279 LVDELRKRK--LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
E R L + + + G +GQ +M +LG + + VT N +I+
Sbjct: 710 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 769
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
+ G E+ +L+ M Q P+ TY L+ ++K+ L+ +IL G++PD+
Sbjct: 770 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK 829
Query: 397 KTYDAIV 403
T ++V
Sbjct: 830 LTCHSLV 836
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 180/395 (45%), Gaps = 5/395 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+DG G+ ALK+ +M + P+ VSY +++G CK LA M
Sbjct: 378 ALIDGHISEGNFKEALKMFY---MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G TY +IDG + G L+E++ L +EM + G+ P+IV Y++++ + G
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A +++ + + P+ Y+ L CR G L EA++++ ++ D F+ N+L
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +CK+ M + G+ P+ + +I+G G KA +++ M K+
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFG 312
P Y S + GLCK A+ + L +D +NTL++ SG + +A
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 674
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG-IRPDCITYTTLITHF 371
L EM + + TY +LI+ LC+ G A K +G + P+ + YT +
Sbjct: 675 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 734
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
K + I + M G PD T +A++ +
Sbjct: 735 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 769
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 3/328 (0%)
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
PSV Y LI Y R G +++SL + M G P++ N+IL + + G+
Sbjct: 163 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
L +M+ + ICPD ++ IL LC G ++ L ++ K + N +L++ CK
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
M ++G+ DV T +I C+ K L M K PN
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 318
YN+ ING +A L++E+ L + TFN LI G+ + G EA + M+
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
+ GL+ + V+Y L++ LCKN + A+ M G+ ITYT +I K +
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 379 EVIALHDYMILKGVIPDQKTYDAIVTPF 406
E + L + M G+ PD TY A++ F
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGF 488
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 186/433 (42%), Gaps = 46/433 (10%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG----GLLLAEEV- 69
LL CK+G+L A+ + +M S+ P+S +Y S+I+G C+KG +L A+E
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEM---VQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 70 ---------------LGDMVKAG----------------FEPSVRTYATLIDGYARWGSL 98
+ M KAG P + T +IDGY+R G +
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 99 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
E++ L EM + PN+ YN +L+ + D+ + + +I I PD+ + L
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
G+C + L LK+ + + D ++ N+L++ C + M + G+
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895
Query: 219 PPDVYT---KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
D T +V++ N + + L + M K P Y INGLC++
Sbjct: 896 SLDKDTCDAMVSVLNRNHRFQESRMVL---HEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 276 AKNLVDELRKRKLLDATTFNT-LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
A + +E+ K+ + ++ + G+ DEA L M + L ++ TL++
Sbjct: 953 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 1012
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
L CKNG EA EL +M G++ D ++Y LIT K L++ M G +
Sbjct: 1013 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1072
Query: 395 DQKTYDAIVTPFL 407
+ TY A++ L
Sbjct: 1073 NATTYKALIRGLL 1085
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 203/395 (51%), Gaps = 15/395 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG C+ L+ A+ ++ + P+ VS+NSI++G+CK G + +A+ ++
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEW---KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G PSV ++ LI+G GS+ E+L L +M + G+ P+ V YN + + G +
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN--- 191
A +V+ DM+DK + PD +Y IL G C+ G + L +L D++ F LN
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL-----VLLKDMLSRGFELNSII 364
Query: 192 ---ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
++L+ +CK+ M GL PD+ + VI G CKLG + AL LY+ M
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQI 307
PN + + + GLC+ A++L+D L + LD +N +I GY+ SG I
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 308 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
+EA L + G++ + T+N+LI CK EA++++ ++ + G+ P ++YTTL
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 368 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
+ + + + + L M +G+ P TY I
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 203/449 (45%), Gaps = 55/449 (12%)
Query: 3 LIGSGGCIKEW--------VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII 54
L+ G ++W +LL + + +D +L ++KKM N ++ SYNS++
Sbjct: 110 LLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLN---VSTQSYNSVL 166
Query: 55 NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 114
F + + + D+ K + + TY+T++DG R LE+++ + +
Sbjct: 167 YHFRET-------DKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG 219
Query: 115 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 174
P++V +NSI+ + G ++ A ++ + P YS+ IL GLC G + EAL+L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 175 HNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 234
+ + K + D+ + NIL M+ +GL PDV T ++ G C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 235 LGN------------------------------------TEKALRLYNGMIKMDEQPNLT 258
LGN ++AL L+N M P+L
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 259 IYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM 317
Y+ I+GLCK+ D+A L DE+ KR L ++ T L+ G G + EA L +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 377
S G + + V YN +I+ K+GC EEA EL K++I GI P T+ +LI + K +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 378 EEVIALHDYMILKGVIPDQKTYDAIVTPF 406
E + D + L G+ P +Y ++ +
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 178/406 (43%), Gaps = 21/406 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTG---NSVWPNSVSYNSIINGFCKKGGLLLAEEVL 70
+LL G C+ G++D+ L ++K M L G NS+ P SV +++G CK G + A +
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDM-LSRGFELNSIIPCSV----MLSGLCKTGRIDEALSLF 386
Query: 71 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
M G P + Y+ +I G + G + +L L DEM ++ + PN + ++L L +
Sbjct: 387 NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
G + EA +L +I D Y I+ +G ++G + EAL+L +++ + +
Sbjct: 447 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
N L+ CK+ + GL P V + T++D GNT+ L M
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 566
Query: 251 MDEQPNLTIYNSFINGLCKMASTD----VAKNLVDELRKRKLLD---------ATTFNTL 297
P Y+ GLC+ + V + + E K+ L D T+NT+
Sbjct: 567 EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 626
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 357
I + AF MKS L A+ TYN LI+ LC G +A + + Q +
Sbjct: 627 IQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Query: 358 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
YTTLI K PE + L ++ +G + Y A++
Sbjct: 687 SLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 166/375 (44%), Gaps = 16/375 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V+L G CKTG +D AL + N M + + P+ V+Y+ +I+G CK G +A + +M
Sbjct: 368 VMLSGLCKTGRIDEALSLF---NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
P+ RT+ L+ G + G L E+ L D ++ G +IV+YN ++ + G +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EEA ++ +I+ I P ++ L G C+ + EA K+ + I + L S L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC---KLGNTEKALR------L 244
++ M G+PP T + + G C K N LR
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 245 YNGMIKMDEQ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISG 300
G+ M+ + P+ YN+ I LC++ A ++ ++ R L + T+N LI
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 301 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 360
G I +A ++ +S ++ Y TLI C G E A +L ++ +G
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724
Query: 361 CITYTTLITHFNKKH 375
Y+ +I ++H
Sbjct: 725 IRDYSAVINRLCRRH 739
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 204/391 (52%), Gaps = 4/391 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K D+ + + KKM ++ + + ++N +IN FC + LA +LG M+
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVL---GIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+EP T +L++G+ R + +++ L D+MVE G P+IV YN+I+ L + +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A ++ K I P+ +Y L GLC + ++A +L + ++K + + + + LL
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ K+ M+ + PD+ T +++I+G C ++A ++++ M+
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGL 313
++ YN+ ING CK + L E+ +R L+ T T+NTLI G+ +G +D+A
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
++M G+S + TYN L+ LC NG E+A + + M + + D +TYTT+I K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
EE +L + LKG+ PD TY +++
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 201/386 (52%), Gaps = 4/386 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++++ C + LAL ++ KM L G P+ V+ S++NGFC++ + A ++ M
Sbjct: 125 IVINCFCCCFQVSLALSILGKM-LKLGYE--PDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ G++P + Y +ID + + ++ E+ +G+ PN+V Y +++ L
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A+++LSDMI K I P+ +Y+ L + +NG + EA +L ++++ + D + + L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N +C M+++G DV + T+I+G CK E ++L+ M +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
N YN+ I G + D A+ ++ + D T+N L+ G ++G++++A
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
+ +M+ + + VTY T+I +CK G EEA L + ++G++PD +TYTT+++
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKT 398
K EV AL+ M +G++ + T
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 151/313 (48%), Gaps = 1/313 (0%)
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
L +++ L +MV+ FP+IV +N +L + + + + M I D Y++ I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ C ++ AL + ++LK D ++ L+N C+ M+ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVA 276
PD+ +ID CK A + + + +PN+ Y + +NGLC + +D A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 277 KNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+ L D ++K+ + T++ L+ + +G++ EA L EM + + + VTY++LIN L
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C + +EA ++ +M+ +G D ++Y TLI F K E+ + L M +G++ +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 397 KTYDAIVTPFLLA 409
TY+ ++ F A
Sbjct: 366 VTYNTLIQGFFQA 378
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 160/339 (47%), Gaps = 1/339 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A ++ DMVK+ PS+ + L+ + + + L +M G+ ++ +N ++
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
+ A +L M+ PD+ + L G CR +++A+ L +++++
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D + N +++ +CK+ + +G+ P+V T +++G C A RL
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNS 304
+ MIK PN+ Y++ ++ K AK L +E+ + + D T+++LI+G
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
+IDEA + M S G A+ V+YNTLIN CK E+ +L + M +G+ + +TY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
TLI F + ++ M G+ PD TY+ ++
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 1/252 (0%)
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L++ R+ L +A+ L + ++K N LL+ I K M G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ D+YT VI+ C AL + M+K+ +P+ S +NG C+ A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+LVD++ + D +N +I + ++++AF E++ G+ N VTY L+N L
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C + +A L+ MI + I P+ ITY+ L+ F K E L + M+ + PD
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 397 KTYDAIVTPFLL 408
TY +++ L
Sbjct: 296 VTYSSLINGLCL 307
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 3 LIGSGGCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFC 58
L+ S GC+ + V L++G CK ++ +K+ ++M + + N+V+YN++I GF
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM---SQRGLVSNTVTYNTLIQGFF 376
Query: 59 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 118
+ G + A+E M G P + TY L+ G G LE++L + ++M +R + +IV
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
Y +++ + + G +EEA + + K + PD +Y + GLC G L E L+ ++
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 179 LKFDLIEDAFSLN 191
+ L+++ +L+
Sbjct: 497 KQEGLMKNDCTLS 509
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 203/395 (51%), Gaps = 15/395 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG C+ L+ A+ ++ + P+ VS+NSI++G+CK G + +A+ ++
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEW---KDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G PSV ++ LI+G GS+ E+L L +M + G+ P+ V YN + + G +
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN--- 191
A +V+ DM+DK + PD +Y IL G C+ G + L +L D++ F LN
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL-----VLLKDMLSRGFELNSII 364
Query: 192 ---ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
++L+ +CK+ M GL PD+ + VI G CKLG + AL LY+ M
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQI 307
PN + + + GLC+ A++L+D L + LD +N +I GY+ SG I
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 308 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
+EA L + G++ + T+N+LI CK EA++++ ++ + G+ P ++YTTL
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 368 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
+ + + + + L M +G+ P TY I
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 203/449 (45%), Gaps = 55/449 (12%)
Query: 3 LIGSGGCIKEW--------VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII 54
L+ G ++W +LL + + +D +L ++KKM N ++ SYNS++
Sbjct: 110 LLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLN---VSTQSYNSVL 166
Query: 55 NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF 114
F + + + D+ K + + TY+T++DG R LE+++ + +
Sbjct: 167 YHFRET-------DKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG 219
Query: 115 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 174
P++V +NSI+ + G ++ A ++ + P YS+ IL GLC G + EAL+L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 175 HNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 234
+ + K + D+ + NIL M+ +GL PDV T ++ G C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 235 LGN------------------------------------TEKALRLYNGMIKMDEQPNLT 258
LGN ++AL L+N M P+L
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 259 IYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM 317
Y+ I+GLCK+ D+A L DE+ KR L ++ T L+ G G + EA L +
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 377
S G + + V YN +I+ K+GC EEA EL K++I GI P T+ +LI + K +
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 378 EEVIALHDYMILKGVIPDQKTYDAIVTPF 406
E + D + L G+ P +Y ++ +
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 178/406 (43%), Gaps = 21/406 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTG---NSVWPNSVSYNSIINGFCKKGGLLLAEEVL 70
+LL G C+ G++D+ L ++K M L G NS+ P SV +++G CK G + A +
Sbjct: 332 ILLCGQCQLGNIDMGLVLLKDM-LSRGFELNSIIPCSV----MLSGLCKTGRIDEALSLF 386
Query: 71 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
M G P + Y+ +I G + G + +L L DEM ++ + PN + ++L L +
Sbjct: 387 NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
G + EA +L +I D Y I+ +G ++G + EAL+L +++ + +
Sbjct: 447 GMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATF 506
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
N L+ CK+ + GL P V + T++D GNT+ L M
Sbjct: 507 NSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 566
Query: 251 MDEQPNLTIYNSFINGLCKMASTD----VAKNLVDELRKRKLLD---------ATTFNTL 297
P Y+ GLC+ + V + + E K+ L D T+NT+
Sbjct: 567 EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTI 626
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 357
I + AF MKS L A+ TYN LI+ LC G +A + + Q +
Sbjct: 627 IQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Query: 358 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
YTTLI K PE + L ++ +G + Y A++
Sbjct: 687 SLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 166/375 (44%), Gaps = 16/375 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V+L G CKTG +D AL + N M + + P+ V+Y+ +I+G CK G +A + +M
Sbjct: 368 VMLSGLCKTGRIDEALSLF---NQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
P+ RT+ L+ G + G L E+ L D ++ G +IV+YN ++ + G +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EEA ++ +I+ I P ++ L G C+ + EA K+ + I + L S L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC---KLGNTEKALR------L 244
++ M G+PP T + + G C K N LR
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 245 YNGMIKMDEQ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISG 300
G+ M+ + P+ YN+ I LC++ A ++ ++ R L + T+N LI
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 301 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 360
G I +A ++ +S ++ Y TLI C G E A +L ++ +G
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724
Query: 361 CITYTTLITHFNKKH 375
Y+ +I ++H
Sbjct: 725 IRDYSAVINRLCRRH 739
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 203/426 (47%), Gaps = 39/426 (9%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++++ C+ L LA M K+ + P++V+++++ING C +G + A E++ M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKL---GYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ G +P++ T L++G G + +++ L D MVE G PN V Y +L + + G
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A ++L M ++ I D Y+I+ +GLC++G L A L N++ D L
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ C + MI R + PDV + +ID K G +A L+ MI+
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
P+ Y S I+G CK D A +++D + + + TFN LI+GY + ID+
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L +M G+ A+ VTYNTLI C+ G E AKEL + M+ + +RPD ++Y L+
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 373 KKHHPEEV---------------IALHDYMI--------------------LKGVIPDQK 397
PE+ I +++ +I LKGV PD K
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 398 TYDAIV 403
TY+ ++
Sbjct: 529 TYNIMI 534
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 195/394 (49%), Gaps = 4/394 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G C G + A+ ++ +M + TG PN V+Y ++ CK G LA E+L M
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRM-VETG--FQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ + Y+ +IDG + GSL+ + L +EM +G +I++Y +++ G +
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+ +K+L DMI + I PD +++ L + + G L EA +LH ++++ + D + L+
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ CK M+++G P++ T +I+G CK + L L+ M
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
+ YN+ I G C++ +VAK L E+ R++ D ++ L+ G ++G+ ++A +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+++ + + YN +I+ +C ++A +L + ++G++PD TY +I K
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
K E L M G P+ TY+ ++ L
Sbjct: 540 KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 177/360 (49%), Gaps = 4/360 (1%)
Query: 10 IKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 69
+K +++DG CK GSLD A + +M + + + Y ++I GFC G ++
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEI---KGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 70 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
L DM+K P V ++ LID + + G L E+ L EM++RG+ P+ V Y S++ +
Sbjct: 305 LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
+++A+ +L M+ K P+ ++ IL G C+ + + L+L ++ ++ D +
Sbjct: 365 ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT 424
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
N L+ C+ M++R + PD+ + ++DG C G EKAL ++ +
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQID 308
K + ++ IYN I+G+C + D A +L L + + D T+N +I G G +
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
EA L +M+ G S N TYN LI G ++ +L++ + G D T ++
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 180/387 (46%), Gaps = 39/387 (10%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+T DL L + K+M L + N + + +IN C+ L LA +G ++K G+EP
Sbjct: 84 RTKQYDLVLDLCKQMEL---KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEP 140
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
T++TLI+G G + E+L L D MVE G P ++ N+
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNA------------------ 182
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
L GLC NG +++A+ L +++++ + + +L +CKS
Sbjct: 183 -----------------LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M R + D + +IDG CK G+ + A L+N M + ++ IY
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
+ I G C D L+ ++ KRK+ D F+ LI + G++ EA L EM
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
G+S + VTY +LI+ CK ++A ++ +M+ +G P+ T+ LI + K + ++
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 380 VIALHDYMILKGVIPDQKTYDAIVTPF 406
+ L M L+GV+ D TY+ ++ F
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGF 432
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 169/345 (48%), Gaps = 1/345 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A ++ +M ++ P + ++ L AR + L LC +M +G+ N+ + ++
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R + A + +I PD +++ L GLC G ++EAL+L +++++
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
+LN L+N +C + M+ G P+ T V+ CK G T A+ L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNS 304
M + + + Y+ I+GLCK S D A NL +E+ + D + TLI G+ +
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G+ D+ L +M ++ + V ++ LI+ K G EA+EL K MI +GI PD +TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
T+LI F K++ ++ + D M+ KG P+ +T++ ++ + A
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 155/298 (52%), Gaps = 5/298 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D K G L A ++ K+M + P++V+Y S+I+GFCK+ L A +L MV
Sbjct: 323 LIDCFVKEGKLREAEELHKEM---IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G P++RT+ LI+GY + +++ L L +M RG+ + V YN+++ G +E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A ++ +M+ + + PD SY IL +GLC NG +AL++ +I K + D NI++
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +C + S+ +G+ PDV T +I G CK G+ +A L+ M +
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
PN YN I + L++E+++ +DA+T ++ S+ G++ ++F
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLKKSF 616
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 15/338 (4%)
Query: 83 RTYATLIDGYARWGSLEESLR-------------LCDEMVERGLFPNIVVYNSILYWLYR 129
R ++++ DG + S E LR L EM P ++ ++ + + R
Sbjct: 26 RVFSSVSDGKGKV-SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVAR 84
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
+ + M K I + Y+ +I+ CR L+ A +I+K D +
Sbjct: 85 TKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVT 144
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
+ L+N +C M+ G P + T +++G C G A+ L + M+
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
+ QPN Y + +CK T +A L+ ++ +RK+ LDA ++ +I G G +D
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
AF L EM+ G A+ + Y TLI C G ++ +L++ MI + I PD + ++ LI
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
F K+ E LH MI +G+ PD TY +++ F
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 180/349 (51%), Gaps = 4/349 (1%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+T +L L K++ L N + N + N +IN FC+ A VLG ++K G+EP
Sbjct: 100 RTKQFNLVLDFCKQLEL---NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
T+ TLI G G + E++ L D MVE G P++V YNSI+ + R GD A +L
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
M ++++ D ++Y+ + + LCR+G + A+ L ++ + + N L+ +CK+
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M++R + P+V T ++D K G ++A LY MI PN+ Y
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
N+ ++G C A N++D + + K D TF +LI GY ++D+ + +
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
GL AN VTY+ L+ C++G + A+EL + M+ G+ PD +TY L+
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 184/371 (49%), Gaps = 1/371 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M N P+ V+YNSI+NG C+ G LA ++L M + + V TY+T+ID R G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++ ++ L EM +G+ ++V YNS++ L + G + + +L DM+ + I P+ ++ +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + + G L EA +L+ +++ + + + N L++ C M+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
PD+ T ++I G C + + ++++ + K N Y+ + G C+ +A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L E+ +L D T+ L+ G ++G++++A + +++ + V Y T+I +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK G E+A L + +G++P+ +TYT +I+ KK E L M G P+
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 397 KTYDAIVTPFL 407
TY+ ++ L
Sbjct: 544 CTYNTLIRAHL 554
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 172/347 (49%), Gaps = 4/347 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++D C+ G +D A+ + K+M + + V+YNS++ G CK G +L DMV
Sbjct: 234 IIDSLCRDGCIDAAISLFKEME---TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
P+V T+ L+D + + G L+E+ L EM+ RG+ PNI+ YN+++ +
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA+ +L M+ PD ++ L +G C + + +K+ I K L+ +A + +IL+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
C+S M++ G+ PDV T ++DG C G EKAL ++ + K
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
+ +Y + I G+CK + A NL L + + + T+ +ISG G + EA L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 360
+M+ G + N TYNTLI ++G + +L++ M G D
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 163/342 (47%), Gaps = 1/342 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A + +M+++ PS+ ++ AR L C ++ G+ NI N ++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R A VL ++ PD ++ L +GL G ++EA+ L +++++
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D + N ++N IC+S M R + DV+T +T+ID C+ G + A+ L+
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 304
M + ++ YNS + GLCK + L+ ++ R+++ + TFN L+ +
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G++ EA L EM + G+S N +TYNTL++ C EA ++ +M+ PD +T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
T+LI + ++ + + + +G++ + TY +V F
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 138/276 (50%), Gaps = 1/276 (0%)
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++A + +MI P ++ + R L Q+ + + ++LNI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N C+ G ++ G PD T T+I G G +A+ L + M++
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
QP++ YNS +NG+C+ T +A +L+ ++ +R + D T++T+I G ID A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L EM++ G+ ++ VTYN+L+ LCK G + L+K M+ + I P+ IT+ L+ F
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
K+ +E L+ MI +G+ P+ TY+ ++ + +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G C++G + LA ++ ++M + V P+ ++Y +++G C G L A E+ D+
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEM---VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K+ + + Y T+I+G + G +E++ L + +G+ PN++ Y ++ L + G +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA+ +L M + P+ +Y L R+G LT + KL ++ DA S+ ++
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584
Query: 194 LNYI 197
++ +
Sbjct: 585 IDML 588
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%)
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 315
N+ +G+ + D + +R R L F+ S + + Q +
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
+++ G++ N T N +IN C+ A ++ ++ G PD T+ TLI +
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAIV 403
E + L D M+ G PD TY++IV
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIV 200
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 197/391 (50%), Gaps = 4/391 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++++ C+ L LA M K+ + PN+++++++ING C +G + A E++ M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKL---GYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ G +P + T TL++G G E++ L D+MVE G PN V Y +L + + G
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A ++L M +++I D Y+I+ +GLC++G L A L N++ + + + NIL
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ C + MI R + P+V T + +ID K G +A L+ MI
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
P+ Y S I+G CK D A +VD + + + TFN LI+GY + +ID+
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L +M G+ A+ VTYNTLI C+ G AKEL + M+ + + P+ +TY L+
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
E+ + + + + + D Y+ I+
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 193/394 (48%), Gaps = 4/394 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G C +G A+ ++ KM PN+V+Y ++N CK G LA E+L M
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKM---VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ + Y+ +IDG + GSL+ + L +EM +G+ NI+ YN ++ G +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+ +K+L DMI + I P+ ++++L + + G L EA +LH +++ + D + L+
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ CK M+++G P++ T +I+G CK + L L+ M
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
+ YN+ I G C++ +VAK L E+ RK+ + T+ L+ G ++G+ ++A +
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+++ + + YN +I+ +C ++A +L + ++G++P TY +I K
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 555
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
K E L M G PD TY+ ++ L
Sbjct: 556 KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 183/360 (50%), Gaps = 4/360 (1%)
Query: 10 IKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 69
+K +++DG CK GSLD A + +M + + N ++YN +I GFC G ++
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEM---KGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 70 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
L DM+K P+V T++ LID + + G L E+ L EM+ RG+ P+ + Y S++ +
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
+++A++++ M+ K P+ ++ IL G C+ + + L+L ++ ++ D +
Sbjct: 381 ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
N L+ C+ M++R +PP++ T ++DG C G +EKAL ++ +
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQID 308
K + ++ IYN I+G+C + D A +L L + + T+N +I G G +
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
EA L +M+ G + + TYN LI +G ++ +L++ + G D T +I
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 178/345 (51%), Gaps = 1/345 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A ++ DM+ + P+V ++ L A+ + L LC +M +G+ N+ + ++
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R + A + +I P+ +++ L GLC G ++EAL+L +++++
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D ++N L+N +C S M+ G P+ T V++ CK G T A+ L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNS 304
M + + + + Y+ I+GLCK S D A NL +E+ + + + T+N LI G+ N+
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G+ D+ L +M ++ N VT++ LI+ K G EA+EL K MI +GI PD ITY
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
T+LI F K++H ++ + D M+ KG P+ +T++ ++ + A
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 180/393 (45%), Gaps = 39/393 (9%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L KT DL L + K+M L + N + + +IN FC+ L LA +G ++
Sbjct: 94 LFSAIAKTKQYDLVLALCKQMEL---KGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+E PN + +++++ L G +
Sbjct: 151 KLGYE-----------------------------------PNTITFSTLINGLCLEGRVS 175
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA +++ M++ PD + L GLC +G EA+ L ++++++ +A + +L
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N +CKS M R + D + +IDG CK G+ + A L+N M
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
N+ YN I G C D L+ ++ KRK+ + TF+ LI + G++ EA L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
EM G++ + +TY +LI+ CK ++A +++ +M+ +G P+ T+ LI + K
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ ++ + L M L+GV+ D TY+ ++ F
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 155/299 (51%), Gaps = 5/299 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+D K G L A ++ K+M + P++++Y S+I+GFCK+ L A +++ M
Sbjct: 338 VLIDSFVKEGKLREAEELHKEM---IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V G +P++RT+ LI+GY + +++ L L +M RG+ + V YN+++ G +
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A ++ +M+ + + P+ +Y IL +GLC NG +AL++ +I K + D NI+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ +C + S+ +G+ P V T +I G CK G +A L+ M +
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
P+ YN I + L++EL++ +DA+T +I S+ G++ ++F
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD-GRLKKSF 632
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 141/309 (45%), Gaps = 36/309 (11%)
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++A + DMI P ++ L + + L L Q+ + + ++L+I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N C+ G +I G P+ T +T+I+G C G +AL L + M++M
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 254 QPNLTIYNSFINGL-----------------------------------CKMASTDVAKN 278
+P+L N+ +NGL CK T +A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 279 LVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
L+ ++ +R + LDA ++ +I G G +D AF L EM+ G++ N +TYN LI C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
G ++ +L++ MI + I P+ +T++ LI F K+ E LH MI +G+ PD
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 398 TYDAIVTPF 406
TY +++ F
Sbjct: 370 TYTSLIDGF 378
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%)
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 315
NL+ +GL + + D D + R L F+ L S + + Q D L
Sbjct: 53 NLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCK 112
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
+M+ G++ N T + +IN C+ A M +I G P+ IT++TLI +
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
E + L D M+ G PD T + +V L+
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 192/375 (51%), Gaps = 1/375 (0%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
K ++ N M + ++P+ YN +I+G CK + AE++ +M+ PS+ TY TLI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 149
DGY + G+ E+S ++ + M + P+++ +N++L L++ G +E+A VL +M D
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 150 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 209
PD ++++IL +G N AL ++ + + +A++ +ILLN +CK
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 210 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
G + +GL P+ T+IDG C+ G+ A M K +P+ YN I C+
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 270 MASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 328
+ + A+ V++++ + + + T+N LI GY + D+ F + EM+ G N V+
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 329 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 388
Y TLIN LCK EA+ + + M +G+ P Y LI K E+ M+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 389 LKGVIPDQKTYDAIV 403
KG+ + TY+ ++
Sbjct: 557 KKGIELNLVTYNTLI 571
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 184/392 (46%), Gaps = 10/392 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L DG + AL V + + V N+ + + ++N CK+G + AEE+LG
Sbjct: 324 ILFDGYSSNEKAEAALGVYETA---VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G P+ Y T+IDGY R G L + + M ++G+ P+ + YN ++ G+M
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
E A K ++ M K + P +Y IL G R + + ++ + + S L
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N +CK M RG+ P V +IDG C G E A R M+K
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
+ NL YN+ I+GL A++L+ E+ ++ L D T+N+LISGY +G +
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPDCITYTTLITHF 371
L EMK G+ TY+ LI+L C +E EL + + + ++PD + Y ++ +
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLISL-----CTKEGIELTERLFGEMSLKPDLLVYNGVLHCY 675
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
E+ L MI K + D+ TY++++
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 182/375 (48%), Gaps = 19/375 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG C+ G L + K+ M + P+ ++YN +I FC+ G + AE+ + M
Sbjct: 395 MIDGYCRKGDL---VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G PSV TY LI GY R ++ + EM + G PN+V Y +++ L + +
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA V DM D+ + P Y +L +G C G + +A + ++LK + + + N L+
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ + + + +GL PDV+T ++I G GN ++ + LY M + +
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLT 314
P L Y+ I+ LC ++ + L E+ + D +N ++ Y+ G +++AF L
Sbjct: 632 PTLKTYHLLIS-LCTKEGIELTERLFGEMSLKP--DLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 315 TEM--KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
+M KS+GL ++ TYN+LI K G E + L+ M + + P+ TY ++
Sbjct: 689 KQMIEKSIGL--DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV---- 742
Query: 373 KKHHPEEVIALHDYM 387
K H E + DYM
Sbjct: 743 -KGHCE----VKDYM 752
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 163/354 (46%), Gaps = 9/354 (2%)
Query: 1 MTLIGSGGCIKEW-VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 59
M L G ++ + +L+ G + D ++K+M N PN VSY ++IN CK
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME---DNGTMPNVVSYGTLINCLCK 506
Query: 60 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 119
LL A+ V DM G P VR Y LIDG G +E++ R EM+++G+ N+V
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 120 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 179
YN+++ L G + EA +L ++ K + PD ++Y L G G + + L+ + +
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE-M 625
Query: 180 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 239
K I+ LL +C G M L PD+ V+ G+ E
Sbjct: 626 KRSGIKPTLKTYHLLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDME 682
Query: 240 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLI 298
KA L MI+ + T YNS I G K+ ++L+DE+ R++ +A T+N ++
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
G+ A+ EM+ G + N L++ L + +EA+ ++ M
Sbjct: 743 KGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 166/363 (45%), Gaps = 3/363 (0%)
Query: 43 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 102
++P+S S +++ K + V +++++ F PS Y I + + + L
Sbjct: 140 IYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL 199
Query: 103 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
L + M ++P++ +YN ++ L + M +A ++ +M+ + + P +Y L +G
Sbjct: 200 ELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGY 259
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAF-SLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 221
C+ G ++ K+ + +K D IE + + N LL + K+ M G PD
Sbjct: 260 CKAGNPEKSFKVRER-MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV- 280
+T + + DG E AL +Y + + N + +N LCK + A+ ++
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 281 DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
E+ K + + +NT+I GY G + A M+ G+ + + YN LI C+ G
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 400
E A++ + M ++G+ P TY LI + +K+ ++ + M G +P+ +Y
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 401 AIV 403
++
Sbjct: 499 TLI 501
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 142/296 (47%), Gaps = 1/296 (0%)
Query: 112 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 171
G++P+ +L L + V ++++ P ++ Y + + + +
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 172 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 231
L+L N++ + F N+L++ +CK M+ R L P + T T+IDG
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 232 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-D 290
CK GN EK+ ++ M +P+L +N+ + GL K + A+N++ E++ + D
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 291 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 350
A TF+ L GYS++ + + A G+ G+ N T + L+N LCK G E+A+E++
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 351 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ +G+ P+ + Y T+I + +K + M +G+ PD Y+ ++ F
Sbjct: 379 REMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 153 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 212
+SY +L+ L + ++EA L + + + SL +LL+++ K+ +
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
++ P + I KL + K L L+N M P++ IYN I+GLCK
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 273 TDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
+ A+ L DE+ R+LL + T+NTLI GY +G +++F + MK+ + + +T+NT
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
L+ L K G E+A+ ++K M G PD T++ L ++ E + +++ + G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 392 V 392
V
Sbjct: 350 V 350
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 133/311 (42%), Gaps = 69/311 (22%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+DG C G ++ A + K+M L G + N V+YN++I+G G L AE++L ++
Sbjct: 534 MLIDGCCSKGKIEDAFRFSKEM-LKKG--IELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG--------------------- 112
+ G +P V TY +LI GY G+++ + L +EM G
Sbjct: 591 SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIE 650
Query: 113 ----------LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
L P+++VYN +L+ HGDME+A + MI+K I D+ +Y L G
Sbjct: 651 LTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
+ G L E L ++ M R + P+
Sbjct: 711 LKVGKLCEVRSLIDE-----------------------------------MNAREMEPEA 735
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
T ++ G+C++ + A Y M + ++ I N ++GL + + A+ ++ E
Sbjct: 736 DTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISE 795
Query: 283 LRKRKLLDATT 293
+ R L D T
Sbjct: 796 MNGRMLGDVTV 806
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 192/397 (48%), Gaps = 10/397 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G C G +++ K+++ G PN V YN+II G+CK G + A V ++
Sbjct: 210 ILVKGMCNEGKVEVGRKLIEGR---WGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKEL 266
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
GF P++ T+ T+I+G+ + G S RL E+ ERGL ++ N+I+ YRHG
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ ++ + +I PD +Y IL LC+ G A+ ++ K LI + S L
Sbjct: 327 VDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPL 386
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ CKS M RG PD+ T +I G G+ + A+ + +I
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA-- 310
P+ IYN ++GLCK AK L E+ R +L DA + TLI G+ SG DEA
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 311 -FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
F L+ E G+ + V +N +I C++G +EA M M + + PD TY+T+I
Sbjct: 507 VFSLSVEK---GVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ K+ I + YM P+ TY +++ F
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 182/409 (44%), Gaps = 54/409 (13%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L++ CK G ++A+ + + + + PN++SY +I +CK +A ++L M
Sbjct: 350 ILINRLCKEGKKEVAVGFLDEA---SKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G +P + TY LI G G +++++ + ++++RG+ P+ +YN ++ L + G
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A + S+M+D++I PD Y YA L +G R+G EA K+ + ++ + D N +
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ C+S M L PD +T +T+IDG K + A++++ M K
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL------------------------ 289
+PN+ Y S ING C +A+ E++ R L+
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646
Query: 290 -------------DATTFNTLISGY--------------SNSGQIDEAFGLTTEMKSLGL 322
+ TFN L+ G+ SN GQ MKS G
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGW 706
Query: 323 SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
S + YN+ + LC +G + A M+ +G PD +++ ++ F
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 181/395 (45%), Gaps = 7/395 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+L ++GSL A+++ + + +SV P+ ++ NS+++ K L A +V +M
Sbjct: 140 VLHAYAESGSLSKAVEIYDYV-VELYDSV-PDVIACNSLLSLLVKSRRLGDARKVYDEMC 197
Query: 75 KAGFEPSVRTYAT--LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
G SV Y+T L+ G G +E +L + +G PNIV YN+I+ + GD
Sbjct: 198 DRG--DSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGD 255
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+E A V ++ K P ++ + G C+ G + +L +++ + L + LN
Sbjct: 256 IENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNN 315
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
+++ + G +I PDV T +I+ CK G E A+ + K
Sbjct: 316 IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKG 375
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
PN Y I CK D+A L+ ++ +R D T+ LI G SG +D+A
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+ ++ G+S + YN L++ LCK G AK L M+ + I PD Y TLI F
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ +E + + KGV D ++A++ F
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGF 530
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 186/394 (47%), Gaps = 4/394 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K+ L A KV +M G+SV ++ S ++ G C +G + + +++
Sbjct: 176 LLSLLVKSRRLGDARKVYDEM-CDRGDSV--DNYSTCILVKGMCNEGKVEVGRKLIEGRW 232
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G P++ Y T+I GY + G +E + + E+ +G P + + +++ + GD
Sbjct: 233 GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+ ++LS++ ++ + + + + R+GY + + I+ D D + NIL+
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N +CK +GL P+ + A +I CK + A +L M + +
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
P++ Y I+GL D A N+ +L R + DA +N L+SG +G+ A L
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+EM + + Y TLI+ ++G +EA+++ + + +G++ D + + +I F +
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
+E +A + M + ++PD+ TY I+ ++
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 18/241 (7%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G C++G LD AL M +MN + P+ +Y++II+G+ K+ + A ++ M
Sbjct: 526 MIKGFCRSGMLDEALACMNRMN---EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD-M 133
K +P+V TY +LI+G+ G + + EM R L PN+V Y +++ L + +
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCR--------------NGYLTEALKLHNQIL 179
E+A M+ P++ ++ L +G + +G + + +++
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702
Query: 180 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 239
+ A + N L +C M+ +G PD + A ++ G C +GN++
Sbjct: 703 SDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSK 762
Query: 240 K 240
+
Sbjct: 763 Q 763
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 18/280 (6%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG ++G D A KV +L V + V +N++I GFC+ G L A + M
Sbjct: 491 LIDGFIRSGDFDEARKVF---SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ P TY+T+IDGY + + ++++ M + PN+V Y S++ GD +
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCR-NGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A + +M + + P+ +Y L L + + L +A+ ++ + + + N L
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667
Query: 194 LNYICKSXXXXXXXXXXGS--------------MITRGLPPDVYTKATVIDGNCKLGNTE 239
L K GS M + G + + C G +
Sbjct: 668 LQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVK 727
Query: 240 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
A + M+K P+ + + ++G C + ++ +N+
Sbjct: 728 TACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 190/397 (47%), Gaps = 4/397 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+ C G +D A + +M PN +Y +I+G C+ G + A V M
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEM---IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
VK PSV TY LI+GY + G + + L M +R PN+ +N ++ L R G
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A +L M+D + PD SY +L +GLCR G++ A KL + + FD+ D + +
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N CK G M+ +G+ D T T+IDG CK+G T AL + ++KM
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFG 312
N ++ L K ++ ++ K L+ + T+ TL+ G SG I +F
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
+ MK G N Y +IN LC+ G EEA++L+ M G+ P+ +TYT ++ +
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
+ + M+ +G + + Y +++ F+L+
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLS 699
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 191/429 (44%), Gaps = 38/429 (8%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL G C+ +L ALKV M+ + PNSVSY+ +I+G C+ G L A + M
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEV--TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G +PS RTY LI G ++++ L DEM+ RG PN+ Y ++ L R G +E
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA+ V M+ I P +Y L G C++G + A +L + K + + N L+
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+C+ M+ GL PD+ + +IDG C+ G+ A +L + M D +
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVD-ELRKRKLLDATTFNTLISGYSNSG-------- 305
P+ + + IN CK DVA + LRK LD T TLI G G
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 306 ---------------------------QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
++ E + ++ LGL + VTY TL++ L +
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIR 593
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
+G + ++++M + G P+ YT +I + EE L M GV P+ T
Sbjct: 594 SGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 399 YDAIVTPFL 407
Y +V ++
Sbjct: 654 YTVMVKGYV 662
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 185/387 (47%), Gaps = 41/387 (10%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+DG C+ G ++ A V +KM + ++P+ ++YN++ING+CK G ++ A E+L M
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKM---VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K +P+VRT+ L++G R G +++ L M++ GL P+IV YN ++ L R G M
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 134 EEASKVLSDM-----------------------------------IDKHICPDQYSYAIL 158
A K+LS M + K I D+ + L
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
+G+C+ G +AL + ++K ++ SLN++L+ + K G + GL
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
P V T T++DG + G+ + R+ M PN+ Y INGLC+ + A+
Sbjct: 578 VPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637
Query: 279 LVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN--L 335
L+ ++ + + T+ ++ GY N+G++D A M G N Y++L+ +
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCI 362
L + G D + + + ++ P+CI
Sbjct: 698 LSQKGIDNSEESTVSDIALRETDPECI 724
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 163/355 (45%), Gaps = 2/355 (0%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N Y+S++ K LA M GF + Y T+++ + G E +
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCR 164
++++ G + + S+L R ++ +A KV M + C P+ SY+IL GLC
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G L EA L +Q+ + + +L+ +C MI RG P+V+T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+IDG C+ G E+A + M+K P++ YN+ ING CK A L+ +
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 285 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
KR + TFN L+ G G+ +A L M GLS + V+YN LI+ LC+ G
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
A +L+ M I PDC+T+T +I F K+ + A M+ KG+ D+ T
Sbjct: 459 TAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 159/348 (45%), Gaps = 2/348 (0%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
LDL M + + Y +I+N CK G AE + ++K GF
Sbjct: 171 AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDS 230
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMV-ERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 141
+L+ G+ R +L ++L++ D M E PN V Y+ +++ L G +EEA +
Sbjct: 231 HIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKD 290
Query: 142 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 201
M +K P +Y +L + LC G + +A L ++++ + + +L++ +C+
Sbjct: 291 QMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDG 350
Query: 202 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 261
M+ + P V T +I+G CK G A L M K +PN+ +N
Sbjct: 351 KIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFN 410
Query: 262 SFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
+ GLC++ A +L+ + L D ++N LI G G ++ A+ L + M
Sbjct: 411 ELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF 470
Query: 321 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+ + +T+ +IN CK G + A + +M+ +GI D +T TTLI
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 173/386 (44%), Gaps = 43/386 (11%)
Query: 15 LLDGACKTGSLDLALKVMK---KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV-- 69
L+DG CK G AL +++ KM ++T P+S+ N I++ K G + EE+
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILT----TPHSL--NVILDMLSK--GCKVKEELAM 568
Query: 70 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
LG + K G PSV TY TL+DG R G + S R+ + M G PN+ Y I+ L +
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
G +EEA K+LS M D + P+ +Y ++ +G NG L AL+ ++E +
Sbjct: 629 FGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA-----MVERGYE 683
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
LN + I S G D ++TV D + E N +I
Sbjct: 684 LN---DRIYSSLLQGFVLSQKGI--------DNSEESTVSD----IALRETDPECINELI 728
Query: 250 KMDEQ-----PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNS 304
+ EQ L I+ + LCK TD + +LV + +R + + ++ Y +
Sbjct: 729 SVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSK 786
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL-MKMMIMQGI--RPDC 361
+ + L T + G + ++ +I L K G E A+EL M+++ G+ +
Sbjct: 787 KKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGV 846
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYM 387
+TY + ++ EVI L D +
Sbjct: 847 LTYVECLMEGDETGDCSEVIDLVDQL 872
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 197/405 (48%), Gaps = 21/405 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFC--------------- 58
+L+ C L +L K+ T P+ V++N++++G C
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKL---TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 59 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 118
+ G L A + MV+ G P V T+ TLI+G G + E+ L ++MV +GL ++V
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
Y +I+ + + GD + A +LS M + HI PD Y+ + + LC++G+ ++A L +++
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 179 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 238
L+ + + F+ N +++ C MI R + PDV T +I + K G
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 298
+A +L + M+ P+ YNS I G CK D AK++ D + D TFNT+I
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP---DVVTFNTII 439
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 358
Y + ++DE L E+ GL AN TYNTLI+ C+ A++L + MI G+
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 359 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
PD IT L+ F + EE + L + + + + D Y+ I+
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 194/379 (51%), Gaps = 5/379 (1%)
Query: 29 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 88
L+ + + M + P +++N++ING C +G +L A ++ MV G V TY T+
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 89 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 148
++G + G + +L L +M E + P++V+Y++I+ L + G +A + S+M++K I
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 149 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 208
P+ ++Y + +G C G ++A +L +++ ++ D + N L++ K
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 209 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 268
M+ R + PD T ++I G CK + A +++ M P++ +N+ I+ C
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYC 443
Query: 269 KMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 327
+ D L+ E+ +R L+ + TT+NTLI G+ ++ A L EM S G+ + +
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 328 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
T N L+ C+N EEA EL +++ M I D + Y +I K +E L +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 388 ILKGVIPDQKTYDAIVTPF 406
+ GV PD +TY+ +++ F
Sbjct: 564 PIHGVEPDVQTYNVMISGF 582
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 191/396 (48%), Gaps = 8/396 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G C G + L+ +N M G + + V+Y +I+NG CK G A +L M
Sbjct: 232 LINGLCLEGRV---LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ +P V Y+ +ID + G ++ L EM+E+G+ PN+ YN ++ G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A ++L DMI++ I PD ++ L + G L EA KL +++L + D + N ++
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
CK M + PDV T T+ID C+ ++ ++L + +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
N T YN+ I+G C++ + + A++L E+ + D T N L+ G+ + +++EA L
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
++ + + V YN +I+ +CK +EA +L + + G+ PD TY +I+ F
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
K + L M G PD TY+ ++ L A
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 174/371 (46%), Gaps = 43/371 (11%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++D CK G A + +M L G + PN +YN +I+GFC G A+ +L DM+
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEM-LEKG--IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ P V T+ LI + G L E+ +LCDEM+ R +FP+ V YNS++Y +H +
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A M D PD ++ + + CR + E ++L +I + L+ + + N L+
Sbjct: 419 DAKH----MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY--------- 245
+ C+ MI+ G+ PD T ++ G C+ E+AL L+
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 246 ----------NGMIK---MDE-------------QPNLTIYNSFINGLCKMASTDVAKNL 279
+GM K +DE +P++ YN I+G C ++ A L
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 280 VDELRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
+++ D +T+NTLI G +G+ID++ L +EM+S G S + T + +L+
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITD 654
Query: 339 NGCDEEAKELM 349
D+ +++
Sbjct: 655 GRLDKSFSDML 665
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M R +P ++Y+ +I C +L + + K+ QP++ +N+ ++GLC
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 273 TDVAKNLVDELRKRKLLDAT----------------TFNTLISGYSNSGQIDEAFGLTTE 316
A L + + L+A TFNTLI+G G++ EA L +
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
M GL + VTY T++N +CK G + A L+ M I+PD + Y+ +I K H
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 377 PEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ L M+ KG+ P+ TY+ ++ F
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 188/366 (51%), Gaps = 11/366 (3%)
Query: 8 GCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 63
GC + V +++G CK G +DLAL ++ KM + N V +N+II+ CK +
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME---AARIKANVVIFNTIIDSLCKYRHV 274
Query: 64 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 123
+A ++ +M G P+V TY +LI+ +G ++ RL M+E+ + PN+V +N++
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 124 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
+ ++ G + EA K+ +MI + I PD +Y +L G C + L EA ++ ++ D
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
+ + + N L+N CK M RGL + T T+I G + G+ + A
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYS 302
++ M+ ++ Y+ ++GLC D A + L+K ++ L+ +NT+I G
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
+G++ EA+ L SL + + VTYNT+I+ LC +EA +L + M G P+
Sbjct: 515 KAGKVGEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSG 571
Query: 363 TYTTLI 368
TY TLI
Sbjct: 572 TYNTLI 577
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 193/390 (49%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K +L + + ++M + + + +Y+ IN FC++ L LA VL M+
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTL---GISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+EP + T ++L++GY + +++ L D+MVE G P+ + ++++ L+ H
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M+ + PD +Y + GLC+ G + AL L N++ + + N ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK M T+G+ P+V T ++I+ C G A RL + M++
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PN+ +N+ I+ K A+ L +E+ +R + D T+N LI+G+ ++DEA +
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M S N TYNTLIN CK E+ EL + M +G+ + +TYTT+I F +
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + M+ V D TY ++
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 186/367 (50%), Gaps = 4/367 (1%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M P+ V+Y +++NG CK+G + LA +L M A + +V + T+ID ++
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+E ++ L EM +G+ PN+V YNS++ L +G +AS++LS+M++K I P+ ++
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + + G L EA KLH ++++ + D + N+L+N C M+++
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
P++ T T+I+G CK E + L+ M + N Y + I G + D A+
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+ ++ ++ D T++ L+ G + G++D A + ++ + N YNT+I +
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK G EA +L + I+PD +TY T+I+ K +E L M G +P+
Sbjct: 514 CKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Query: 397 KTYDAIV 403
TY+ ++
Sbjct: 571 GTYNTLI 577
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 172/342 (50%), Gaps = 1/342 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A ++ GDMVK+ PS+ + L+ A+ E + L ++M G+ ++ Y+ +
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R + A VL+ M+ PD + + L G C + +++A+ L +Q+++
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D F+ L++ + M+ RG PD+ T TV++G CK G+ + AL L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 304
N M + N+ I+N+ I+ LCK +VA +L E+ + + + T+N+LI+ N
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G+ +A L + M ++ N VT+N LI+ K G EA++L + MI + I PD ITY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
LI F + +E + +M+ K +P+ +TY+ ++ F
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 157/312 (50%), Gaps = 1/312 (0%)
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+++++ L +MV+ FP+IV +N +L + + E + M I D Y+Y+I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
CR L+ AL + +++K D +L+ LLN C S M+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
PD +T T+I G +A+ L + M++ QP+L Y + +NGLCK D+A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
NL++++ ++ + FNT+I ++ A L TEM++ G+ N VTYN+LIN L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C G +A L+ M+ + I P+ +T+ LI F K+ E LH+ MI + + PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 397 KTYDAIVTPFLL 408
TY+ ++ F +
Sbjct: 364 ITYNLLINGFCM 375
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 150/298 (50%), Gaps = 8/298 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D K G L A K+ ++M S+ P++++YN +INGFC L A+++ MV
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEM---IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
P+++TY TLI+G+ + +E+ + L EM +RGL N V Y +I+ ++ GD +
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A V M+ + D +Y+IL GLC G L AL + + K ++ + F N ++
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+CK+ S+ + PDV T T+I G C ++A L+ M +
Sbjct: 511 EGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
PN YN+ I + + L+ E+R + DA+T +L++ + G++D++F
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LL G C G LD AL + K + + + N YN++I G CK G + A ++ +
Sbjct: 473 ILLHGLCSYGKLDTALVIFK---YLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+P V TY T+I G L+E+ L +M E G PN YN+++ R D
Sbjct: 530 ---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDR 586
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGL 162
+++++ +M D + +++T L
Sbjct: 587 AASAELIKEMRSSGFVGDASTISLVTNML 615
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 201/381 (52%), Gaps = 5/381 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++++ C+ +AL V+ KM + G P+ V+ +S+INGFC+ + A +++ M
Sbjct: 109 IVINCLCRCSRFVIALSVVGKM-MKFGYE--PDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ GF P V Y T+IDG + G + +++ L D M G+ + V YNS++ L G
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A++++ DM+ + I P+ ++ + + + G +EA+KL+ ++ + + D F+ N L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N +C M+T+G PDV T T+I+G CK ++ +L+ M +
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL 313
+ YN+ I G + D A+ + + R + T++ L+ G + ++++A L
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP--NIRTYSILLYGLCMNWRVEKALVL 403
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M+ + + TYN +I+ +CK G E+A +L + + +G++PD ++YTT+I+ F +
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Query: 374 KHHPEEVIALHDYMILKGVIP 394
K ++ L+ M G++P
Sbjct: 464 KRQWDKSDLLYRKMQEDGLLP 484
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 188/391 (48%), Gaps = 44/391 (11%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLM-TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L K+ + DL + + M + G+ ++ SYN +IN C+ ++A V+G M
Sbjct: 75 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLY----SYNIVINCLCRCSRFVIALSVVGKM 130
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+K G+EP V T ++LI+G+ + + +++ L +M E G P++V+YN+I+
Sbjct: 131 MKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII--------- 181
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+G C+ G + +A++L +++ + + DA + N L
Sbjct: 182 --------------------------DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +C S M+ R + P+V T VID K G +A++LY M +
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV 275
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
P++ YNS INGLC D AK ++D + + L D T+NTLI+G+ S ++DE
Sbjct: 276 DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L EM GL + +TYNT+I + G + A+E+ M RP+ TY+ L+
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLC 392
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
E+ + L + M + D TY+ ++
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 155/314 (49%), Gaps = 1/314 (0%)
Query: 97 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 156
+LEE + L +M++ P+IV ++ +L + + + + + M I D YSY
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 157 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 216
I+ LCR AL + +++KF D +++ L+N C+ M
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDV 275
G PDV T+IDG+CK+G A+ L++ M + + + YNS + GLC +D
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 276 AKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
A+ + D + + + + TF +I + G+ EA L EM + + TYN+LIN
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
LC +G +EAK+++ +M+ +G PD +TY TLI F K +E L M +G++ D
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 396 QKTYDAIVTPFLLA 409
TY+ I+ + A
Sbjct: 349 TITYNTIIQGYFQA 362
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 195/394 (49%), Gaps = 41/394 (10%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G CK L AL + KM G S PNSV+++ +I F K G + A E M
Sbjct: 345 LITGHCKNNDLVSALVLFDKME-KEGPS--PNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G PSV T+I G+ + EE+L+L DE E GL N+ V N+IL WL + G +
Sbjct: 402 VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTD 460
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA+++LS M + I P+ SY + G CR + DL FS
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNM-------------DLARIVFS----- 502
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+++ +GL P+ YT + +IDG + + + AL + N M + +
Sbjct: 503 -----------------NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDEL--RKRKLLDATTFNTLISGYSNSGQIDEAFG 312
N +Y + INGLCK+ T A+ L+ + KR + ++N++I G+ G++D A
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
EM G+S N +TY +L+N LCKN ++A E+ M +G++ D Y LI F
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
K+ + E AL ++ +G+ P Q Y+++++ F
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 200/392 (51%), Gaps = 5/392 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+L CK G D A +++ KM + PN VSYN+++ G C++ + LA V +++
Sbjct: 449 ILSWLCKQGKTDEATELLSKME---SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL 505
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G +P+ TY+ LIDG R + +L + + M + N VVY +I+ L + G
Sbjct: 506 EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565
Query: 135 EASKVLSDMID-KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A ++L++MI+ K +C SY + +G + G + A+ + ++ + + + L
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N +CK+ M +G+ D+ +IDG CK N E A L++ +++
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
P+ IYNS I+G + + A +L ++ K L D T+ TLI G G + A
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L TEM+++GL + + Y ++N L K G + ++ + M + P+ + Y +I
Sbjct: 746 LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
++ + +E LHD M+ KG++PD T+D +V+
Sbjct: 806 REGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 191/392 (48%), Gaps = 6/392 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL++ K G ++ AL+ KKM ++ + P+ ++II G+ K A ++ +
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKMEVL---GLTPSVFHVHTIIQGWLKGQKHEEALKLFDES 435
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G +V T++ + G +E+ L +M RG+ PN+V YN+++ R +M
Sbjct: 436 FETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNM 494
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A V S++++K + P+ Y+Y+IL +G RN AL++ N + ++ + +
Sbjct: 495 DLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTI 554
Query: 194 LNYICKSXXXXXXXXXXGSMI-TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
+N +CK +MI + L + ++IDG K G + A+ Y M
Sbjct: 555 INGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG 614
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
PN+ Y S +NGLCK D A + DE++ + + LD + LI G+ ++ A
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
L +E+ GL+ ++ YN+LI+ G A +L K M+ G+R D TYTTLI
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K + L+ M G++PD+ Y IV
Sbjct: 735 LKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 147/287 (51%), Gaps = 3/287 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+++G CK G A +++ N++ + + +SYNSII+GF K+G + A +M
Sbjct: 554 IINGLCKVGQTSKARELLA--NMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G P+V TY +L++G + ++++L + DEM +G+ +I Y +++ + +ME
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME 671
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
AS + S+++++ + P Q Y L G G + AL L+ ++LK L D + L+
Sbjct: 672 SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ + K M GL PD +++G K G K ++++ M K +
Sbjct: 732 DGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISG 300
PN+ IYN+ I G + + D A L DE+ + +L D TF+ L+SG
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 175/390 (44%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL+ K D A+ ++ N M V P N ++ ++ L A+E+ MV
Sbjct: 169 LLNAYSKDRQTDHAVDIV---NQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G + T L+ R E+L + +ERG P+ ++Y+ + + D+
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLA 285
Query: 135 EASKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A+ +L +M +K +C P Q +Y + + G + +A++L +++L + + + L
Sbjct: 286 MANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ CK+ M G P+ T + +I+ K G EKAL Y M +
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL 313
P++ ++ I G K + A L DE + L + NT++S G+ DEA L
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATEL 465
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
++M+S G+ N V+YN ++ C+ + A+ + ++ +G++P+ TY+ LI +
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR 525
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
H + + + ++M + + Y I+
Sbjct: 526 NHDEQNALEVVNHMTSSNIEVNGVVYQTII 555
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 157/363 (43%), Gaps = 36/363 (9%)
Query: 77 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 136
GFE + R + L++ Y++ + ++ + ++M+E + P N L L + + EA
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 137 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 196
++ S M+ + D + +L R EAL++ ++ ++ D+ ++ +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 197 ICKSXXXXXXXXXXGSMITRGL-PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
CK+ M + L P T +VI + K GN + A+RL + M+
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDEAFGLT 314
N+ S I G CK A L D++ K ++ TF+ LI + +G++++A
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 315 TEMKSLGLS----------------------------------ANRVTYNTLINLLCKNG 340
+M+ LGL+ AN NT+++ LCK G
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQG 457
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 400
+EA EL+ M +GI P+ ++Y ++ ++ + + + ++ KG+ P+ TY
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 401 AIV 403
++
Sbjct: 518 ILI 520
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G G++ AL + KKM + + + +Y ++I+G K G L+LA E+ +M
Sbjct: 695 LISGFRNLGNMVAALDLYKKM---LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G P Y +++G ++ G + +++ +EM + + PN+++YN+++ YR G+++
Sbjct: 752 AVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLD 811
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
EA ++ +M+DK I PD ++ IL G N
Sbjct: 812 EAFRLHDEMLDKGILPDGATFDILVSGQVGN 842
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Query: 270 MASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 328
MAS V+K LVD + +++ FN L++ YS Q D A + +M L +
Sbjct: 142 MASVLVSK-LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPY 200
Query: 329 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 388
N ++ L + EAKEL M+ G+ D +T L+ ++ P E + + I
Sbjct: 201 VNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAI 260
Query: 389 LKGVIPDQKTYDAIV 403
+G PD Y V
Sbjct: 261 ERGAEPDSLLYSLAV 275
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 197/405 (48%), Gaps = 21/405 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFC--------------- 58
+L+ C L +L K+ T P+ V++N++++G C
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKL---TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 59 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 118
+ G L A + MV+ G P V T+ TLI+G G + E+ L ++MV +GL ++V
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
Y +I+ + + GD + A +LS M + HI PD Y+ + + LC++G+ ++A L +++
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 179 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 238
L+ + + F+ N +++ C MI R + PDV T +I + K G
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 298
+A +L + M+ P+ YNS I G CK D AK++ D + D TFNT+I
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP---DVVTFNTII 439
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 358
Y + ++DE L E+ GL AN TYNTLI+ C+ A++L + MI G+
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 359 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
PD IT L+ F + EE + L + + + + D Y+ I+
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 188/363 (51%), Gaps = 5/363 (1%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P +++N++ING C +G +L A ++ MV G V TY T+++G + G + +L L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
+M E + P++V+Y++I+ L + G +A + S+M++K I P+ ++Y + +G C
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G ++A +L +++ ++ D + N L++ K M+ R + PD T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
++I G CK + A +++ M P++ +N+ I+ C+ D L+ E+
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 285 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+R L+ + TT+NTLI G+ ++ A L EM S G+ + +T N L+ C+N E
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
EA EL +++ M I D + Y +I K +E L + + GV PD +TY+ ++
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 404 TPF 406
+ F
Sbjct: 580 SGF 582
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 191/396 (48%), Gaps = 8/396 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G C G + L+ +N M G + + V+Y +I+NG CK G A +L M
Sbjct: 232 LINGLCLEGRV---LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ +P V Y+ +ID + G ++ L EM+E+G+ PN+ YN ++ G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A ++L DMI++ I PD ++ L + G L EA KL +++L + D + N ++
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
CK M + PDV T T+ID C+ ++ ++L + +
Sbjct: 409 YGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
N T YN+ I+G C++ + + A++L E+ + D T N L+ G+ + +++EA L
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
++ + + V YN +I+ +CK +EA +L + + G+ PD TY +I+ F
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
K + L M G PD TY+ ++ L A
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 173/370 (46%), Gaps = 44/370 (11%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++D CK G A + +M L G + PN +YN +I+GFC G A+ +L DM
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEM-LEKG--IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++ P V T+ LI + G L E+ +LCDEM+ R +FP+ V YNS++Y +H
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++A M D PD ++ + + CR + E ++L +I + L+ + + N L
Sbjct: 418 DDAKH----MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY-------- 245
++ C+ MI+ G+ PD T ++ G C+ E+AL L+
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 246 -----------NGMIK---MDE-------------QPNLTIYNSFINGLCKMASTDVAKN 278
+GM K +DE +P++ YN I+G C ++ A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 279 LVDELRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
L +++ D +T+NTLI G +G+ID++ L +EM+S G S + T ++C
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653
Query: 338 KNGCDEEAKE 347
+ DEE E
Sbjct: 654 RVS-DEEIIE 662
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M R +P ++Y+ +I C +L + + K+ QP++ +N+ ++GLC
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 273 TDVAKNLVDELRKRKLLDAT----------------TFNTLISGYSNSGQIDEAFGLTTE 316
A L + + L+A TFNTLI+G G++ EA L +
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
M GL + VTY T++N +CK G + A L+ M I+PD + Y+ +I K H
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 377 PEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ L M+ KG+ P+ TY+ ++ F
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 203/427 (47%), Gaps = 36/427 (8%)
Query: 13 W-VLLDGACKTGSLDLALKVMKKMNLM-----------------------TGNSVW---- 44
W +L+D CK G +D A+ +K+M M G +++
Sbjct: 215 WGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL 274
Query: 45 -----PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 99
P +++YN++I GFCK G L A E+ M++ G P+V TY LIDG G +
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
E+L+L + M+E+ PN V YN I+ L + G + +A +++ M + PD +Y IL
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIED--AFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
GLC G L EA KL +LK D S N L++ +CK ++ +
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
D T +++ K G+ KA+ L+ + N Y + I+G CK +VAK
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 278 NLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L+ ++R +L + +N L+S G +D+A+ L EM+ + V++N +I+
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
K G + A+ L+ M G+ PD TY+ LI F K + +E I+ D M+ G PD
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Query: 397 KTYDAIV 403
D+++
Sbjct: 635 HICDSVL 641
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 195/398 (48%), Gaps = 6/398 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G C+ L+ AL++ N M G+ + V++ +I+ FCK G + A L +M
Sbjct: 183 VIRGFCEGKELEKALELA---NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G E + Y +LI G+ G L+ L DE++ERG P + YN+++ + G ++
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EAS++ MI++ + P+ Y+Y L +GLC G EAL+L N +++ D +A + NI++
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE- 253
N +CK M R PD T ++ G C G+ ++A +L M+K
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Query: 254 -QPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAF 311
P++ YN+ I+GLCK A ++ D L K D T N L++ +G +++A
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
L ++ + N TY +I+ CK G AK L+ M + ++P Y L++
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
K+ ++ L + M PD +++ ++ L A
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 175/387 (45%), Gaps = 6/387 (1%)
Query: 26 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 85
+LA +KM + N VS + ++ + + A VL M+K GF +V +
Sbjct: 89 ELAFSFYRKM---LETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNH 145
Query: 86 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 145
L+ G R +++ L EM L P++ YN+++ ++E+A ++ ++M
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 146 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 205
++ IL + C+ G + EA+ ++ L D L+ C
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 206 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 265
++ RG P T T+I G CKLG ++A ++ MI+ +PN+ Y I+
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 266 GLCKMASTDVAKNLVD-ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 324
GLC + T A L++ + K + +A T+N +I+ G + +A + MK
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 325 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQG--IRPDCITYTTLITHFNKKHHPEEVIA 382
+ +TYN L+ LC G +EA +L+ +M+ PD I+Y LI K++ + +
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 383 LHDYMILKGVIPDQKTYDAIVTPFLLA 409
++D ++ K D+ T + ++ L A
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKA 472
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 121/242 (50%), Gaps = 4/242 (1%)
Query: 4 IGSGGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 63
+G+G + +LL+ K G ++ A+++ K++ + + + NS +Y ++I+GFCK G L
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQI---SDSKIVRNSDTYTAMIDGFCKTGML 510
Query: 64 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 123
+A+ +L M + +PSV Y L+ + GSL+++ RL +EM FP++V +N +
Sbjct: 511 NVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIM 570
Query: 124 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
+ + GD++ A +L M + PD ++Y+ L + GYL EA+ ++++
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC-KLGNTEKAL 242
DA + +L Y ++ + + D TV+D C N + A
Sbjct: 631 EPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAK 690
Query: 243 RL 244
RL
Sbjct: 691 RL 692
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 126/270 (46%), Gaps = 1/270 (0%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LL G C G LD A K++ M L + P+ +SYN++I+G CK+ L A ++ +
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLM-LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ T L++ + G + +++ L ++ + + N Y +++ + G +
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML 510
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A +L M + P + Y L LC+ G L +A +L ++ + + D S NI+
Sbjct: 511 NVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIM 570
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ K+ M GL PD++T + +I+ KLG ++A+ ++ M+
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
+P+ I +S + TD LV +L
Sbjct: 631 EPDAHICDSVLKYCISQGETDKLTELVKKL 660
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 203/426 (47%), Gaps = 41/426 (9%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL K DL + +KM ++ + N +YN +IN FC+ L LA +LG M+
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEIL---GISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+EP + T +L++G+ + +++ L D+MVE G P+ V + ++++ L+ H
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ----------------- 177
EA ++ M+ + PD +Y + GLC+ G AL L N+
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 178 --ILKFDLIEDAFSL----------------NILLNYICKSXXXXXXXXXXGSMITRGLP 219
+ K+ +DA +L + L++ +C MI R +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
P++ T + +ID K G KA +LY MIK PN+ Y+S ING C + AK +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 280 VD-ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN-LLC 337
++ +RK L + T+NTLI+G+ + ++D+ L EM GL N VTY TLI+
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
CD A+ + K M+ G+ P+ +TY L+ K + + + +Y+ + PD
Sbjct: 441 ARDCD-NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Query: 398 TYDAIV 403
TY+ ++
Sbjct: 500 TYNIMI 505
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 156/339 (46%), Gaps = 71/339 (20%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M P+ V+Y +++NG CK+G LA +L M A E +V Y+T+ID ++
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+++L L EM +G+ PN++ Y+S++ L +G +AS++LSDMI++ I P+ +++
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + + G L +A KL+ + MI R
Sbjct: 329 LIDAFVKKGKLVKAEKLYEE-----------------------------------MIKRS 353
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ P+++T +++I+G C L +A ++ MI+ D PN+ YN+ ING CK D
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 278 NLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL---- 332
L E+ +R L+ T T+ TLI G+ + D A + +M S+G+ N +TYN L
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 333 -------------------------------INLLCKNG 340
I +CK G
Sbjct: 474 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 183/391 (46%), Gaps = 2/391 (0%)
Query: 21 KTGSLDLALK-VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
+TG D+ L + +M + +P+ + ++ +++ K L M G
Sbjct: 51 RTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGIS 110
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
++ TY LI+ + R L +L L +M++ G P+IV NS+L + +A +
Sbjct: 111 HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
+ M++ PD ++ L GL + +EA+ L +++++ D + ++N +CK
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK 230
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
M + +V +TVID CK + + AL L+ M +PN+
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
Y+S I+ LC A L+ ++ +RK+ + TF+ LI + G++ +A L EM
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
+ N TY++LIN C EAK+++++MI + P+ +TY TLI F K +
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 379 EVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
+ + L M +G++ + TY ++ F A
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 142/298 (47%), Gaps = 36/298 (12%)
Query: 8 GCIKEWV----LLDGACKTGSLDLALKVMKKM---------------------------- 35
GC + V +++G CK G DLAL ++ KM
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 36 -NLMT---GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 91
NL T V PN ++Y+S+I+ C G A +L DM++ P++ T++ LID
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 92 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 151
+ + G L ++ +L +EM++R + PNI Y+S++ + EA ++L MI K P+
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 211
+Y L G C+ + + ++L ++ + L+ + + L++ ++
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 212 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
M++ G+ P++ T ++DG CK G KA+ ++ + + +P++ YN I G+CK
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D K G L A K+ ++M S+ PN +Y+S+INGFC L A+++L M+
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEM---IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ P+V TY TLI+G+ + +++ + L EM +RGL N V Y ++++ ++ D +
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A V M+ + P+ +Y IL +GLC+NG L +A+ + + + + D ++ NI++
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 195 NYICKS 200
+CK+
Sbjct: 506 EGMCKA 511
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G C L A ++++ LM PN V+YN++INGFCK + E+ +M
Sbjct: 364 LINGFCMLDRLGEAKQMLE---LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G + TY TLI G+ + + + + +MV G+ PNI+ YN +L L ++G +
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLA 480
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNG 166
+A V + + PD Y+Y I+ EG+C+ G
Sbjct: 481 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 197/394 (50%), Gaps = 4/394 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G C G + AL ++ +M P+ V+Y ++N CK G LA ++ M
Sbjct: 181 LINGLCLKGRVSEALVLIDRM---VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME 237
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ + SV Y+ +ID + GS +++L L +EM +G+ ++V Y+S++ L G +
Sbjct: 238 ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWD 297
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+ +K+L +MI ++I PD +++ L + + G L EA +L+N+++ + D + N L+
Sbjct: 298 DGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ CK M+++G PD+ T + +I+ CK + +RL+ +
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGL 313
PN YN+ + G C+ + AK L E+ R + + T+ L+ G ++G++++A +
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 477
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+M+ ++ YN +I+ +C ++A L + +G++PD +TY +I K
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
K E L M G PD TY+ ++ L
Sbjct: 538 KGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHL 571
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 187/393 (47%), Gaps = 39/393 (9%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L +T DL L K M L N + + + +IN +C+K LL A VLG
Sbjct: 76 LCSAVARTKQYDLVLGFCKGMEL---NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G+EP T++TL++G+ G + E++ L D MVE P++V ++++ L G +
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M++ PD+ +Y + LC++G N L DL
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG---------NSALALDLFR--------- 234
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
M R + V + VID CK G+ + AL L+N M +
Sbjct: 235 -----------------KMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
++ Y+S I GLC D ++ E+ R ++ D TF+ LI + G++ EA L
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
EM + G++ + +TYN+LI+ CK C EA ++ +M+ +G PD +TY+ LI + K
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
++ + L + KG+IP+ TY+ +V F
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 168/325 (51%), Gaps = 1/325 (0%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+++++++++NGFC +G + A ++ MV+ P + T +TLI+G G + E+L L
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
D MVE G P+ V Y +L L + G+ A + M +++I Y+I+ + LC+
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
+G +AL L N++ + D + + L+ +C MI R + PDV T
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+ +ID K G +A LYN MI P+ YNS I+G CK A + D +
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 285 KRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+ D T++ LI+ Y + ++D+ L E+ S GL N +TYNTL+ C++G
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 344 EAKELMKMMIMQGIRPDCITYTTLI 368
AKEL + M+ +G+ P +TY L+
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILL 462
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 171/376 (45%), Gaps = 39/376 (10%)
Query: 10 IKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 69
++ +++D CK GS D AL + +M + + + V+Y+S+I G C G ++
Sbjct: 246 VQYSIVIDSLCKDGSFDDALSLFNEMEM---KGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 70 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
L +M+ P V T++ LID + + G L E+ L +EM+ RG+ P+ + YNS++ +
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
+ EA+++ M+ K PD +Y+IL C+ + + ++L +I LI + +
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
N L+ C+S M++RG+PP V T ++DG C G KAL ++ M
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQID 308
K + IYN I+G+C + D A +L L + + D T+N +I G G +
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 309 EA-----------------------------------FGLTTEMKSLGLSANRVTYNTLI 333
EA L EMK G SA+ T +I
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Query: 334 NLLCKNGCDEEAKELM 349
++L D+ +++
Sbjct: 603 DMLSDRRLDKSFLDML 618
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 163/345 (47%), Gaps = 1/345 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A ++ M+++ P+ + L AR + L C M G+ ++ ++
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R + A VL PD +++ L G C G ++EA+ L +++++
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D +++ L+N +C M+ G PD T V++ CK GN+ AL L+
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNS 304
M + + + ++ Y+ I+ LCK S D A +L +E+ + + D T+++LI G N
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G+ D+ + EM + + VT++ LI++ K G EAKEL MI +GI PD ITY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
+LI F K++ E + D M+ KG PD TY ++ + A
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 9/247 (3%)
Query: 164 RNGYL----TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
RNG + +A+ L +++ + N L + + ++ M G+
Sbjct: 43 RNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 102
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
D+YT +I+ C+ A + K+ +P+ +++ +NG C A L
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162
Query: 280 VD---ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
VD E+++R D T +TLI+G G++ EA L M G + VTY ++N L
Sbjct: 163 VDRMVEMKQRP--DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK+G A +L + M + I+ + Y+ +I K ++ ++L + M +KG+ D
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 397 KTYDAIV 403
TY +++
Sbjct: 281 VTYSSLI 287
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 181/363 (49%), Gaps = 11/363 (3%)
Query: 13 WVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 72
W+ D CK+G L LALK + M +++ PN V++ +I+G+CK G L +A + +
Sbjct: 169 WI--DTFCKSGELQLALK---SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M + +V TY LIDG+ + G ++ + + MVE + PN +VY +I+ ++ GD
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+ A K L+ M+++ + D +Y ++ GLC NG L EA ++ + K DL+ D
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
++N KS +I RG PDV +T+IDG K G +A+ +
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CI 398
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
E+ N +Y I+ LCK + L ++ + L+ D + + I+G G + +AF
Sbjct: 399 EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
L T M GL + + Y TLI L G EA+++ M+ GI PD + LI +
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Query: 372 NKK 374
K+
Sbjct: 519 EKE 521
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 171/357 (47%), Gaps = 11/357 (3%)
Query: 32 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 91
+K + + P+ S+NS+++ CK G + AE+++ M + G EP V +Y +LIDG
Sbjct: 41 LKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDG 100
Query: 92 YARWGSLE------ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 145
+ R G + ESLR + + P+IV +NS+ + ++E + M+
Sbjct: 101 HCRNGDIRSASLVLESLRASHGFICK---PDIVSFNSLFNGFSKMKMLDEVFVYMGVML- 156
Query: 146 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 205
K P+ +Y+ + C++G L ALK + + + L + + L++ CK+
Sbjct: 157 KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEV 216
Query: 206 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 265
M + +V T +IDG CK G ++A +Y+ M++ +PN +Y + I+
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Query: 266 GLCKMASTDVA-KNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 324
G + +D A K L L + LD T + +ISG +G++ EA + +M+ L
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 325 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
+ V + T++N K+G + A + +I +G PD + +T+I K E I
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 172/370 (46%), Gaps = 5/370 (1%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
+ ++ ++ + +S P+ + N I+ +L+ + L +V G+ P ++ +++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH-- 147
+ G ++ + + M G P+++ YNS++ R+GD+ AS VL + H
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 148 IC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 206
IC PD S+ L G + L E +LK + + + ++ CKS
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLA 182
Query: 207 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 266
SM L P+V T +IDG CK G+ E A+ LY M ++ N+ Y + I+G
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 267 LCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 325
CK A+ + + + ++ ++ + T+I G+ G D A +M + G+ +
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 385
Y +I+ LC NG +EA E+++ M + PD + +TT++ + K + + ++
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362
Query: 386 YMILKGVIPD 395
+I +G PD
Sbjct: 363 KLIERGFEPD 372
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 148/344 (43%), Gaps = 68/344 (19%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG CK G L++A+ + K+M + + N V+Y ++I+GFCKKG + AEE+ MV
Sbjct: 204 LIDGYCKAGDLEVAVSLYKEMRRV---RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Query: 75 KAGFEPSVRTYATLIDGYARWG-----------------------------------SLE 99
+ EP+ Y T+IDG+ + G L+
Sbjct: 261 EDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK 320
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS----- 154
E+ + ++M + L P++V++ +++ ++ G M+ A + +I++ PD +
Sbjct: 321 EATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI 380
Query: 155 -------------------------YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
Y +L + LC+ G E +L ++I + L+ D F
Sbjct: 381 DGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFM 440
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
+ +CK M+ GL D+ T+I G G +A ++++ M+
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEML 500
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT 293
P+ +++ I K + A +L+ ++++R L+ A +
Sbjct: 501 NSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 143/311 (45%), Gaps = 5/311 (1%)
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+ E+L+ + + P+ N ++ L + K L+ ++ + P + S+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM-ITR 216
+ +C+ G + A + + + +F D S N L++ C++ S+ +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 217 GL--PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
G PD+ + ++ +G K+ ++ +Y G++ PN+ Y+++I+ CK
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 275 VAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 333
+A +++ L + TF LI GY +G ++ A L EM+ + +S N VTY LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 334 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 393
+ CK G + A+E+ M+ + P+ + YTT+I F ++ + + M+ +G+
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 394 PDQKTYDAIVT 404
D Y I++
Sbjct: 301 LDITAYGVIIS 311
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 10/229 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V++ G C G L A ++++ M + + P+ V + +++N + K G + A + +
Sbjct: 308 VIISGLCGNGKLKEATEIVEDME---KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESL-RLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
++ GFEP V +T+IDG A+ G L E++ C E N V+Y ++ L + GD
Sbjct: 365 IERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA------NDVMYTVLIDALCKEGD 418
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
E ++ S + + + PD++ Y GLC+ G L +A KL ++++ L+ D +
Sbjct: 419 FIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTT 478
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 241
L+ + M+ G+ PD +I K GN A
Sbjct: 479 LIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 5/243 (2%)
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
+ EAL+ +++ K + D F+ N ++ + S +++RG P + +
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
V+ CKLG + A + + M + +P++ YNS I+G C+ A +++ LR
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 288 LL----DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
D +FN+L +G+S +DE F M S N VTY+T I+ CK+G +
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQ 180
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
A + M + P+ +T+T LI + K E ++L+ M + + TY A++
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 404 TPF 406
F
Sbjct: 241 DGF 243
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 3/130 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+D CK G ++V + + ++ + P+ Y S I G CK+G L+ A ++ M
Sbjct: 408 VLIDALCKEGDF---IEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ G + Y TLI G A G + E+ ++ DEM+ G+ P+ V++ ++ + G+M
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNM 524
Query: 134 EEASKVLSDM 143
AS +L DM
Sbjct: 525 AAASDLLLDM 534
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 166/344 (48%), Gaps = 36/344 (10%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
PN V++ ++INGFCK+G + A ++ M + G EP + Y+TLIDGY + G L +L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
+ + +G+ ++VV++S + + GD+ AS V M+ + I P+ +Y IL +GLC+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
+G + EA ++ QILK RG+ P + T
Sbjct: 404 DGRIYEAFGMYGQILK-----------------------------------RGMEPSIVT 428
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL-VDEL 283
+++IDG CK GN LY MIKM P++ IY ++GL K A V L
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 284 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+ L+ FN+LI G+ + DEA + M G+ + T+ T++ + G E
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE 548
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
EA L M G+ PD + Y TLI F K P + L D M
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 186/418 (44%), Gaps = 39/418 (9%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G C+ G + A + ++ + P+ V+Y+S+I+GFCK G L + DM
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQI---LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+K G+ P V Y L+DG ++ G + ++R +M+ + + N+VV+NS++ R
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA KV M I PD ++ + G L EAL L ++ K L DA + L
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ CK M + D+ VI K E A + +N +I+
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELR----------------------------- 284
+P++ YN+ I G C + D A+ + + L+
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 285 -------KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
K +A T+ L+ +S S I+ +F L EM+ G+S + V+Y+ +I+ LC
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
K G +EA + I + PD + Y LI + K E L+++M+ GV PD
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 190/428 (44%), Gaps = 39/428 (9%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL---- 70
L++G CK G +D A + K +M + P+ ++Y+++I+G+ K G L + ++
Sbjct: 292 LINGFCKRGEMDRAFDLFK---VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 71 ---------------------GDMVKA----------GFEPSVRTYATLIDGYARWGSLE 99
GD+ A G P+V TY LI G + G +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
E+ + ++++RG+ P+IV Y+S++ + G++ + DMI PD Y +L
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
+GL + G + A++ ++L + + N L++ C+ M G+
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PDV T TV+ + G E+AL L+ M KM +P+ Y + I+ CK + L
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 280 VDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
D +++ K+ D N +I +I++A + + + VTYNT+I C
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
+EA+ + +++ + P+ +T T LI K + + I + M KG P+ T
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 399 YDAIVTPF 406
Y ++ F
Sbjct: 709 YGCLMDWF 716
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 164/359 (45%), Gaps = 35/359 (9%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
VS N ++ G + +A +L ++ G P+V T+ TLI+G+ + G ++ + L
Sbjct: 253 VSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 167
M +RG+ P+++ Y++++ ++ G + K+ S + K + D ++ + ++G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
L A ++ ++L + + + IL+ +C+ G ++ RG+ P + T ++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
+IDG CK GN LY MIKM P++ IY ++GL
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL-------------------- 471
Query: 288 LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
S G + A + +M + N V +N+LI+ C+ +EA +
Sbjct: 472 --------------SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 348 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ ++M + GI+PD T+TT++ + EE + L M G+ PD Y ++ F
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 18 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 77
G C LD A ++ + L+ PN+V+ +I+ CK + A + M + G
Sbjct: 645 GYCSLRRLDEAERIFE---LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 78 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 137
+P+ TY L+D +++ +E S +L +EM E+G+ P+IV Y+ I+ L + G ++EA+
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 761
Query: 138 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF-----DLIEDAFS 189
+ ID + PD +YAIL G C+ G L EA L+ +L+ DL++ A S
Sbjct: 762 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALS 818
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 2/195 (1%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
++ RG + + V+ G + E A RL + ++ PN+ + + ING CK
Sbjct: 243 VMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 273 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
D A +L + +R + D ++TLI GY +G + L ++ G+ + V +++
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
I++ K+G A + K M+ QGI P+ +TYT LI + E ++ ++ +G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 392 VIPDQKTYDAIVTPF 406
+ P TY +++ F
Sbjct: 422 MEPSIVTYSSLIDGF 436
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 178/359 (49%), Gaps = 5/359 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL+G C+ A+ ++ M+ G PN V YN++ING CK L A EV M
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMD---GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 211
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G TY TLI G + G ++ RL +MV+R + PN++ + +++ + G++
Sbjct: 212 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA + +MI + + P+ ++Y L G C +G L +A + + ++ D + N L+
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
CKS M +GL D +T T+I G C+ G A +++N M+
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
P++ YN ++ LC + A +V++L+K ++ +D T+N +I G + ++ EA+ L
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY-TTLITHF 371
+ G+ + + Y T+I+ LC+ G EA +L + M G P Y TL H+
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 193/386 (50%), Gaps = 6/386 (1%)
Query: 21 KTGSLDLALKVMKKM-NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
K D+ + + KM NL + ++ S+ +I+ FC+ L LA +LG M+K GF
Sbjct: 91 KMNKFDIVIYLYHKMENLGISHDLY----SFTILIHCFCRCSRLSLALALLGKMMKLGFR 146
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
PS+ T +L++G+ + +E++ L D M G PN+V+YN+++ L ++ D+ A +V
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
M K I D +Y L GL +G T+A +L ++K + + L++ K
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
MI R + P+V+T ++I+G C G A +++ M+ P++
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 318
YN+ I G CK + L E+ + L+ DA T+NTLI GY +G+++ A + M
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
G+S + VTYN L++ LC NG E+A +++ + + D ITY +I + +
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
Query: 379 EVIALHDYMILKGVIPDQKTYDAIVT 404
E L + KGV PD Y +++
Sbjct: 447 EAWCLFRSLTRKGVKPDAIAYITMIS 472
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 166/369 (44%), Gaps = 10/369 (2%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV------RTYATLIDGYARWGSLEES 101
++++S + GF ++ LLL G+ + S Y + +++
Sbjct: 7 IAFSSSVKGFVRRHYLLLER---GNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDA 63
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
L EM++ P+IV + +L + + + + M + I D YS+ IL
Sbjct: 64 FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHC 123
Query: 162 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 221
CR L+ AL L +++K +L LLN C+ SM G P+
Sbjct: 124 FCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN 183
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVAKNLV 280
V TVI+G CK + AL ++ M K + + YN+ I+GL TD A+ L
Sbjct: 184 VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR 243
Query: 281 DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
D ++++ + F LI + G + EA L EM + N TYN+LIN C +G
Sbjct: 244 DMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG 303
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 400
C +AK + +M+ +G PD +TY TLIT F K E+ + L M +G++ D TY+
Sbjct: 304 CLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYN 363
Query: 401 AIVTPFLLA 409
++ + A
Sbjct: 364 TLIHGYCQA 372
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 152/339 (44%), Gaps = 1/339 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A + +M+++ PS+ + ++ A+ + + L +M G+ ++ + +++
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
R + A +L M+ P + L G C+ EA+ L + + F +
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
+ N ++N +CK+ M +G+ D T T+I G G A RL
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 304
M+K PN+ + + I+ K + A+NL E+ +R ++ + T+N+LI+G+
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G + +A + M S G + VTYNTLI CK+ E+ +L M QG+ D TY
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
TLI + + + + M+ GV PD TY+ ++
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 183/366 (50%), Gaps = 7/366 (1%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGD---MVKAGFEPSVRTYATLIDGYARWGSLEES 101
P+S + SI+NG ++ + V D M+ G P V Y L + G +
Sbjct: 162 PDSKACLSILNGLVRRRRF---DSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKK 218
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
+L DEM G+ PN+ +Y + L R MEEA K+ M + P+ Y+Y+ + +G
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDG 278
Query: 162 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 221
C+ G + +A L+ +IL +L+ + L++ CK+ M+ G+ P+
Sbjct: 279 YCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
+Y +I G+CK GN +A+ L + M ++ P++ Y INGLC A L
Sbjct: 339 LYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Query: 282 ELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
+++ ++ ++ T+N+LI GY +++A L +EM + G+ N +T++TLI+ C
Sbjct: 399 KMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR 458
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 400
+ A L M ++GI PD +TYT LI K+ + +E + L+ M+ G+ P+ T+
Sbjct: 459 DIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFA 518
Query: 401 AIVTPF 406
+V F
Sbjct: 519 CLVDGF 524
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 183/377 (48%), Gaps = 4/377 (1%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C+ ++ A K+ + LM + V PN +Y+++I+G+CK G + A + +++ A
Sbjct: 245 CRDNKMEEAEKMFE---LMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELL 301
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P+V + TL+DG+ + L + L MV+ G+ PN+ VYN +++ + G+M EA +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
LS+M ++ PD ++Y IL GLC + EA +L ++ + + + N L++ CK
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
M G+ P++ T +T+IDG C + + + A+ LY M P++
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 318
Y + I+ K A+ A L ++ + + + TF L+ G+ G++ A E
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
N V + LI LC+NG A M GI PD +Y +++ ++
Sbjct: 542 QQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRIT 601
Query: 379 EVIALHDYMILKGVIPD 395
+ + L MI G++P+
Sbjct: 602 DTMMLQCDMIKTGILPN 618
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 168/347 (48%), Gaps = 4/347 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG CKTG++ A + K++ + + PN V + ++++GFCK L+ A + MV
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVA---ELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G +P++ Y LI G+ + G++ E++ L EM L P++ Y ++ L +
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA+++ M ++ I P +Y L G C+ + +AL L +++ + + + + L+
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ C M +G+ PDV T +ID + K N ++ALRLY+ M++
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGL 313
PN + ++G K VA + E ++R + F LI G +G I A
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 360
++M+S G++ + +Y +++ + + L MI GI P+
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 132/246 (53%), Gaps = 3/246 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L++G C + A ++ +KM ++P+S +YNS+I+G+CK+ + A ++ +M
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMK---NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+G EP++ T++TLIDGY ++ ++ L EM +G+ P++V Y +++ ++ +M
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA ++ SDM++ I P+ +++A L +G + G L+ A+ + + + + L
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +C++ M + G+ PD+ + +++ G+ + + L MIK
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Query: 254 QPNLTI 259
PNL +
Sbjct: 616 LPNLLV 621
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG C + A+ + +M T + P+ V+Y ++I+ K+ + A + DM+
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEM---TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+AG P+ T+A L+DG+ + G L ++ E ++ N V + ++ L ++G +
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYIL 566
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
AS+ SDM I PD SY + +G + +T+ + +L+ D+I+ N+L+
Sbjct: 567 RASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM-----MLQCDMIKTGILPNLLV 621
Query: 195 N 195
N
Sbjct: 622 N 622
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG K G L +A+ ++ N S W N V + +I G C+ G +L A DM
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENN--QQRSCW-NHVGFTCLIEGLCQNGYILRASRFFSDMR 576
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
G P + +Y +++ G+ + + +++ L +M++ G+ PN++V N +L Y+
Sbjct: 577 SCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV-NQLLARFYQ 630
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 201/454 (44%), Gaps = 75/454 (16%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
K G +D ALKV ++M PN +YN +I+ C+ G L A E+ M KAG P
Sbjct: 355 KMGKVDEALKVFEEMK----KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Query: 81 SVRT-----------------------------------YATLIDGYARWGSLEESLRLC 105
+VRT + +LIDG + G ++++ ++
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID-------------------- 145
++M++ N +VY S++ + HG E+ K+ DMI+
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 146 ---------------KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
+ PD SY+IL GL + G+ E +L + + + D +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
NI+++ CK M T+G P V T +VIDG K+ ++A L+
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 309
+ N+ IY+S I+G K+ D A +++EL ++ L + T+N+L+ + +I+E
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
A MK L + N+VTY LIN LCK +A + M QG++P I+YTT+I+
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K + E AL D G +PD Y+A++
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 194/429 (45%), Gaps = 40/429 (9%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V +D K G +D+A K ++ N + P+ V+Y S+I CK L A E+ +
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIE---ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K P Y T+I GY G +E+ L + +G P+++ YN IL L + G +
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA KV +M K P+ +Y IL + LCR G L A +L + + K L + ++NI+
Sbjct: 360 DEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ +CKS M + PD T ++IDG K+G + A ++Y M+ D
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 254 Q-----------------------------------PNLTIYNSFINGLCKMASTDVAKN 278
+ P+L + N++++ + K + +
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 279 LVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
+ +E++ R+ + DA +++ LI G +G +E + L MK G + YN +I+ C
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
K G +A +L++ M +G P +TY ++I K +E L + K + +
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 398 TYDAIVTPF 406
Y +++ F
Sbjct: 659 IYSSLIDGF 667
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 144/301 (47%), Gaps = 36/301 (11%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
++ +YN +I+GFCK G + A ++L +M GFEP+V TY ++IDG A+ L+E+ L
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+E + + N+V+Y+S++ + G ++EA +L +++ K + P+ Y++ L + L +
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
+ EAL +C SM P+ T
Sbjct: 706 EEINEAL------------------------VC-----------FQSMKELKCTPNQVTY 730
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+I+G CK+ KA + M K +P+ Y + I+GL K + A L D +
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 286 RK-LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
+ D+ +N +I G SN + +AF L E + GL + T L++ L KN C E+
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQ 850
Query: 345 A 345
A
Sbjct: 851 A 851
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 165/385 (42%), Gaps = 5/385 (1%)
Query: 26 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 85
D+ L + ++M + P + ++I GF K+G + A +L +M + + + Y
Sbjct: 185 DMMLTLFQQMQEL---GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241
Query: 86 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 145
ID + + G ++ + + E+ GL P+ V Y S++ L + ++EA ++ +
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 146 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 205
P Y+Y + G G EA L + I + N +L + K
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 206 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 265
M + P++ T +ID C+ G + A L + M K PN+ N ++
Sbjct: 362 ALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 266 GLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 324
LCK D A + +E+ + D TF +LI G G++D+A+ + +M
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 325 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 384
N + Y +LI +G E+ ++ K MI Q PD T + K PE+ A+
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 385 DYMILKGVIPDQKTYDAIVTPFLLA 409
+ + + +PD ++Y ++ + A
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKA 565
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 172/408 (42%), Gaps = 39/408 (9%)
Query: 1 MTLIGSGGCIKEWV-LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 59
M++ G G + + ++ G K L V++ +M P +Y ++I F
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ---MMRKFKFRPAFSAYTTLIGAFSA 180
Query: 60 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 119
+ + M + G+EP+V + TLI G+A+ G ++ +L L DEM L +IV+
Sbjct: 181 VNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVL 240
Query: 120 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 179
YN + + G ++ A K ++ + PD+ +Y + LC+ L EA+++ +
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 180 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 239
K + P Y T+I G G +
Sbjct: 301 KNRRV-----------------------------------PCTYAYNTMIMGYGSAGKFD 325
Query: 240 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLIS 299
+A L P++ YN + L KM D A + +E++K + +T+N LI
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILID 385
Query: 300 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
+G++D AF L M+ GL N T N +++ LCK+ +EA + + M + P
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP 445
Query: 360 DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
D IT+ +LI K ++ +++ M+ + Y +++ F
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 179/398 (44%), Gaps = 15/398 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G K G +D AL ++ +M +S+ + V YN I+ F K G + +A + ++
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMK---SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G +P TY ++I + L+E++ + + + + P YN+++ G +
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA +L K P +Y + L + G + EALK+ ++ K D + + NIL+
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILI 384
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +C++ SM GL P+V T ++D CK ++A ++ M
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD------ATTFNTLISGYSNSGQID 308
P+ + S I+GL K+ D A + + K+LD + + +LI + N G+ +
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYE-----KMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+ + +M + S + NT ++ + K G E+ + + + + + PD +Y+ LI
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
K E L M +G + D + Y+ ++ F
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 153/358 (42%), Gaps = 6/358 (1%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
SYNS++ + +++LG+M AGF PSV T ++ G + L E + M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 109 VERGLFPNIVVYNSIL--YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 166
+ P Y +++ + H DM + M + P + + L G + G
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDM--MLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 167 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 226
+ AL L +++ L D N+ ++ K + GL PD T
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-K 285
++I CK ++A+ ++ + K P YN+ I G D A +L++ R K
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 286 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
+ +N +++ G++DEA + EMK + N TYN LI++LC+ G + A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 346 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
EL M G+ P+ T ++ K +E A+ + M K PD+ T+ +++
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 199/395 (50%), Gaps = 14/395 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+ CK G L A+ +L+ + ++V+YN++I+G C+ G A + L +M
Sbjct: 134 VLIHSFCKVGRLSFAI------SLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 187
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
VK G P +Y TLIDG+ + G+ + L DE+ E N++ + +L Y +
Sbjct: 188 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITHTILLSSYYNLHAI 243
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EEA + DM+ PD +++ + LC+ G + E L ++ + + + + L
Sbjct: 244 EEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTL 300
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ + K+ M+ RG+P D+ ++DG K G+ +A + + +++ ++
Sbjct: 301 VDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQ 360
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
PN+ Y + ++GLCK A+ ++ ++ ++ ++ + T++++I+GY G ++EA
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVS 420
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L +M+ + N TY T+I+ L K G +E A EL K M + G+ + L+ H
Sbjct: 421 LLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLK 480
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
+ +EV L M+ KGV DQ Y +++ F
Sbjct: 481 RIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFF 515
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 205/463 (44%), Gaps = 75/463 (16%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG CK G L A ++ +M SV PN V+Y+S+ING+ KKG L A +L M
Sbjct: 370 LVDGLCKAGDLSSAEFIITQM---LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
P+ TY T+IDG + G E ++ L EM G+ N + ++++ L R G ++
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 486
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
E ++ DM+ K + DQ +Y L + + G AL ++ + + D S N+L+
Sbjct: 487 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 546
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYT-----------------------------K 225
+ + K G M +G+ PD+ T K
Sbjct: 547 SGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 605
Query: 226 ATVIDGN------CKLGNTEKALRLYNGMIKMDEQPNLT--------------------- 258
+++ N C+ G E+A+ + N M+ M+ PNLT
Sbjct: 606 PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKT 665
Query: 259 --------------IYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSN 303
+YN+ I LCK+ T A ++ ++ R + D TFN+L+ GY
Sbjct: 666 HETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFV 725
Query: 304 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
+ +A + M G+S N TYNT+I L G +E + + M +G+RPD T
Sbjct: 726 GSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFT 785
Query: 364 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
Y LI+ K + + + ++ MI G++P TY+ +++ F
Sbjct: 786 YNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 175/360 (48%), Gaps = 2/360 (0%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+ V+++SIIN CK G +L +L +M + P+ TY TL+D + +L L
Sbjct: 257 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALAL 316
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
+MV RG+ ++VVY ++ L++ GD+ EA K +++ + P+ +Y L +GLC+
Sbjct: 317 YSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCK 376
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G L+ A + Q+L+ +I + + + ++N K M + + P+ +T
Sbjct: 377 AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFT 436
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV-DEL 283
TVIDG K G E A+ L M + + N I ++ +N L ++ K LV D +
Sbjct: 437 YGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMV 496
Query: 284 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
K LD + +LI + G + A EM+ G+ + V+YN LI+ + K G
Sbjct: 497 SKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG-KV 555
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
A K M +GI PD T+ ++ K+ E ++ L D M G+ P + + +V
Sbjct: 556 GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVV 615
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 158/333 (47%), Gaps = 3/333 (0%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
VSYN +I+G K G + A+ M + G EP + T+ +++ + G E L+L D+
Sbjct: 540 VSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDK 598
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 167
M G+ P+++ N ++ L +G MEEA +L+ M+ I P+ +Y I + ++
Sbjct: 599 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 658
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
K H +L + + N L+ +CK G M RG PD T +
Sbjct: 659 ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 718
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
++ G + KAL Y+ M++ PN+ YN+ I GL + E++ R
Sbjct: 719 LMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 778
Query: 288 LL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
+ D T+N LISG + G + + + EM + GL TYN LI+ G +A+
Sbjct: 779 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 838
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKK-HHPE 378
EL+K M +G+ P+ TY T+I+ K HP+
Sbjct: 839 ELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPD 871
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 171/402 (42%), Gaps = 49/402 (12%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS---------VRTYATLIDGYARWG 96
N S++SI K+ + +EE + + F+P V + TL Y
Sbjct: 18 NCRSFSSI-----KRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCE 72
Query: 97 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM-EEASKVLSDMIDKHICPDQYSY 155
L + R M G+ P+ ++NS+++ +G + ++ S + S MI + PD ++
Sbjct: 73 RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFAL 132
Query: 156 AILTEGLCRNGYLTEALK-LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
+L C+ G L+ A+ L N+++ D + + N +++ +C+ M+
Sbjct: 133 NVLIHSFCKVGRLSFAISLLRNRVISIDTV----TYNTVISGLCEHGLADEAYQFLSEMV 188
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRL----------------------------YN 246
G+ PD + T+IDG CK+GN +A L Y
Sbjct: 189 KMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYR 248
Query: 247 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSG 305
M+ P++ ++S IN LCK L+ E+ + + + T+ TL+ +
Sbjct: 249 DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKAN 308
Query: 306 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 365
A L ++M G+ + V Y L++ L K G EA++ KM++ P+ +TYT
Sbjct: 309 IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 366 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
L+ K + M+ K VIP+ TY +++ ++
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 136/288 (47%), Gaps = 4/288 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++++ K G + LK+ KM + P+ +S N ++ C+ G + A +L M
Sbjct: 578 IMMNSQRKQGDSEGILKLWDKMK---SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQM 634
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ P++ TY +D ++ + + + ++ G+ + VYN+++ L + G
Sbjct: 635 MLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMT 694
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++A+ V+ DM + PD ++ L G ++ +AL ++ +++ + + + N +
Sbjct: 695 KKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTI 754
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ + + M +RG+ PD +T +I G K+GN + ++ +Y MI
Sbjct: 755 IRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGL 814
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISG 300
P + YN I+ + A+ L+ E+ KR + + +T+ T+ISG
Sbjct: 815 VPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 191/401 (47%), Gaps = 15/401 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G K +D A + +M N + PN+ +Y + I+G+ + A++ + +M
Sbjct: 493 LIIGLSKAKRMDEARSFLVEM---VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P+ LI+ Y + G + E+ MV++G+ + Y ++ L+++ ++
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A ++ +M K I PD +SY +L G + G + +A + +++++ L + N+LL
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
C+S M +GL P+ T T+IDG CK G+ +A RL++ M
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLT 314
P+ +Y + ++G C++ + A + +K FN LI+ G+ + L
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE----LK 785
Query: 315 TEMKSLGLSA--------NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
TE+ + + N VTYN +I+ LCK G E AKEL M + P ITYT+
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
L+ ++K E+ + D I G+ PD Y I+ FL
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFL 886
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 163/325 (50%), Gaps = 4/325 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G C +G LD A ++K+M + PN V Y ++I F + A VL +M
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEM---IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P + Y +LI G ++ ++E+ EMVE GL PN Y + + +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A K + +M + + P++ L C+ G + EA + ++ ++ DA + +L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N + K+ M +G+ PDV++ +I+G KLGN +KA +++ M++
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
PN+ IYN + G C+ + AK L+DE+ + L +A T+ T+I GY SG + EAF L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 314 TTEMKSLGLSANRVTYNTLINLLCK 338
EMK GL + Y TL++ C+
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 194/458 (42%), Gaps = 68/458 (14%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNL--------------------------------MTGN 41
VL+DG CK L+ A ++ +M+ M +
Sbjct: 282 VLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341
Query: 42 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR------- 94
+ Y+ I K+G + A+ + M+ +G P + YA+LI+GY R
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 95 ----------------------------WGSLEESLRLCDEMVERGLFPNIVVYNSILYW 126
G L+ + + EM+ G PN+V+Y +++
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 127 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED 186
++ +A +VL +M ++ I PD + Y L GL + + EA ++++ L +
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 187 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 246
AF+ ++ ++ M G+ P+ +I+ CK G +A Y
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 247 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSG 305
M+ + Y +NGL K D A+ + E+R + + D ++ LI+G+S G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 306 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 365
+ +A + EM GL+ N + YN L+ C++G E+AKEL+ M ++G+ P+ +TY
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 366 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
T+I + K E L D M LKG++PD Y +V
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 179/389 (46%), Gaps = 10/389 (2%)
Query: 22 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 81
T ++D ALK+ + M + P +Y+ +I+G CK L A+ +L +M G
Sbjct: 255 TLNVDGALKLKESM---ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 82 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 141
TY+ LIDG + + + + L EMV G+ +Y+ + + + G ME+A +
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371
Query: 142 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 201
MI + P +YA L EG CR + + +L ++ K +++ ++ ++ +C S
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431
Query: 202 XXXXXXXXXGSMITRGLPPDVYTKATVID---GNCKLGNTEKALRLYNGMIKMDEQPNLT 258
MI G P+V T+I N + G+ A+R+ M + P++
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD---AMRVLKEMKEQGIAPDIF 488
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEM 317
YNS I GL K D A++ + E+ + L +A T+ ISGY + + A EM
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 377
+ G+ N+V LIN CK G EA + M+ QGI D TYT L+ K
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 378 EEVIALHDYMILKGVIPDQKTYDAIVTPF 406
++ + M KG+ PD +Y ++ F
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 164/368 (44%), Gaps = 47/368 (12%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL++G K +D A ++ ++M G + P+ SY +INGF K G + A + +M
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMR---GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ G P+V Y L+ G+ R G +E++ L DEM +GL PN V Y +I+ + GD+
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL------------------KLH 175
EA ++ +M K + PD + Y L +G CR + A+ L
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALI 773
Query: 176 NQILKFDLIE--------------DAF------SLNILLNYICKSXXXXXXXXXXGSMIT 215
N + KF E D F + NI+++Y+CK M
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 216 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
L P V T ++++G K+G + +++ I +P+ +Y+ IN K T
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 276 AKNLVDELRKRKLLD------ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 329
A LVD++ + +D +T L+SG++ G+++ A + M L + T
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953
Query: 330 NTLINLLC 337
LIN C
Sbjct: 954 IELINESC 961
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 185/432 (42%), Gaps = 46/432 (10%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSII--------------------NGFCK 59
C GS + AL V+++M + N WP + ++SI+ +G+
Sbjct: 108 CNFGSFEKALSVVERM--IERN--WPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIA 163
Query: 60 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 119
KG + A V + P + L+D RW L+ + MVER + ++
Sbjct: 164 KGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKT 223
Query: 120 YNSILYWLYRHGDMEEASKVL---------------------SDMIDKHICPDQYSYAIL 158
Y+ ++ R G+++ VL MI K + P +Y+Y +L
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
+GLC+ L +A L ++ + D + ++L++ + K M++ G+
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
Y I K G EKA L++GMI P Y S I G C+ +
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403
Query: 279 LVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
L+ E++KR + + T+ T++ G +SG +D A+ + EM + G N V Y TLI
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
+N +A ++K M QGI PD Y +LI +K +E + M+ G+ P+
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523
Query: 398 TYDAIVTPFLLA 409
TY A ++ ++ A
Sbjct: 524 TYGAFISGYIEA 535
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 151/347 (43%), Gaps = 38/347 (10%)
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
E + +++ L +GS E++L + + M+ER +P V++SI+ +
Sbjct: 94 EQKLDSFSFLALDLCNFGSFEKALSVVERMIERN-WPVAEVWSSIV-------------R 139
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
+ + K D + IL +G GY+ EA+ + + + +L+ +LL+ +
Sbjct: 140 CSQEFVGKS--DDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN----------TEKALRL---- 244
+ M+ R + DV T +I +C+ GN TEK R
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLN 257
Query: 245 YNGMIKMDEQ-------PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNT 296
+G +K+ E P Y+ I+GLCK+ + AK+L+ E+ + LD T++
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 297 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
LI G D A GL EM S G++ Y+ I ++ K G E+AK L MI G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 357 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ P Y +LI + ++ + + L M + ++ TY +V
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVW---PNSVSYNSIINGFCKKGGLLLAEEVLG 71
L++ K G +L +V+ + LM G+ PN V+YN +I+ CK+G L A+E+
Sbjct: 772 LINWVFKFGKTELKTEVLNR--LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 72 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
M A P+V TY +L++GY + G E + DE + G+ P+ ++Y+ I+ + G
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAI-----LTEGLCRNGYLTEALKLHNQILKFDLIED 186
+A ++ M K+ D +I L G + G + A K+ +++ I D
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 187 AFSLNILLNYICKS 200
+ ++ L+N C S
Sbjct: 950 SATVIELINESCIS 963
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 188/390 (48%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D + GSL+ A+++ +LM + S +YN++I G+CK G AE +L +M+
Sbjct: 371 LIDSFIEAGSLNKAIEIK---DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
GF + ++ ++I + +LR EM+ R + P + +++ L +HG
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A ++ ++K D + L GLC G L EA ++ +IL + D S N L+
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ C M+ RGL PD YT + +I G + E+A++ ++ +
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT-FNTLISGYSNSGQIDEAFGL 313
P++ Y+ I+G CK T+ + DE+ + + T +N LI Y SG++ A L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+MK G+S N TY +LI + EEAK L + M M+G+ P+ YT LI + K
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+V L M K V P++ TY ++
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 182/392 (46%), Gaps = 4/392 (1%)
Query: 16 LDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 75
++ CK G ++ A+K+ KM V PN V++N++I+G G A MV+
Sbjct: 267 INAFCKGGKVEEAVKLFSKME---EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 76 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
G EP++ TY+ L+ G R + ++ + EM ++G PN++VYN+++ G + +
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
A ++ M+ K + +Y L +G C+NG A +L ++L + S ++
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+C G M+ R + P T+I G CK G KAL L+ +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRK-LLDATTFNTLISGYSNSGQIDEAFGLT 314
+ N+ ++GLC+ D A + E+ R ++D ++NTLISG ++DEAF
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 374
EM GL + TY+ LI L EEA + G+ PD TY+ +I K
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 375 HHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
EE D M+ K V P+ Y+ ++ +
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 1/362 (0%)
Query: 43 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 102
V P+ + + IN FCK G + A ++ M +AG P+V T+ T+IDG G +E+
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 103 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
++MVERG+ P ++ Y+ ++ L R + +A VL +M K P+ Y L +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
G L +A+++ + ++ L + + N L+ CK+ M++ G +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL-VD 281
+ +VI C + ALR M+ + P + + I+GLCK A L
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 282 ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
L K ++D T N L+ G +G++DEAF + E+ G +RV+YNTLI+ C
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 401
+EA + M+ +G++PD TY+ LI + EE I D G++PD TY
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 402 IV 403
++
Sbjct: 616 MI 617
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 176/385 (45%), Gaps = 14/385 (3%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C D AL+ + +M L ++ P ++I+G CK G A E+ + GF
Sbjct: 446 CSHLMFDSALRFVGEMLL---RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
RT L+ G G L+E+ R+ E++ RG + V YN+++ ++EA
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
L +M+ + + PD Y+Y+IL GL + EA++ + + ++ D ++ +++++ CK
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
+ M+++ + P+ +I C+ G AL L M PN
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
Y S I G+ ++ + AK L +E+R L + + LI GY GQ+ + L EM
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 742
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
S + N++TY +I ++G EA L+ M +GI PD ITY I + K+
Sbjct: 743 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
Query: 379 EVIALHDYMILKGVIPDQKTYDAIV 403
E KG D++ Y AI+
Sbjct: 803 EA--------FKG--SDEENYAAII 817
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 181/390 (46%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG G D A +KM + P ++Y+ ++ G + + A VL +M
Sbjct: 301 VIDGLGMCGRYDEAFMFKEKM---VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 357
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K GF P+V Y LID + GSL +++ + D MV +GL YN+++ ++G +
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD 417
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A ++L +M+ +Q S+ + LC + AL+ ++L ++ L L+
Sbjct: 418 NAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 477
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK + +G D T ++ G C+ G ++A R+ ++
Sbjct: 478 SGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
+ YN+ I+G C D A +DE+ KR L D T++ LI G N +++EA
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+ K G+ + TY+ +I+ CK EE +E M+ + ++P+ + Y LI + +
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ L + M KG+ P+ TY +++
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 142/304 (46%), Gaps = 4/304 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
LL G C+ G LD A ++ K++ G + VSYN++I+G C K L A L +M
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEI---LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
VK G +P TY+ LI G +EE+++ D+ G+ P++ Y+ ++ +
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EE + +M+ K++ P+ Y L CR+G L+ AL+L + + ++ + L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ + M GL P+V+ +IDG KLG K L M +
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
PN Y I G + + A L++E+R++ ++ D+ T+ I GY G + EAF
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Query: 313 LTTE 316
+ E
Sbjct: 807 GSDE 810
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%)
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
D F T I+ + G+++EA L ++M+ G++ N VT+NT+I+ L G +EA
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 350 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
+ M+ +G+ P ITY+ L+ + + + M KG P+ Y+ ++ F+ A
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 188/390 (48%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D + GSL+ A+++ +LM + S +YN++I G+CK G AE +L +M+
Sbjct: 371 LIDSFIEAGSLNKAIEIK---DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
GF + ++ ++I + +LR EM+ R + P + +++ L +HG
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A ++ ++K D + L GLC G L EA ++ +IL + D S N L+
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ C M+ RGL PD YT + +I G + E+A++ ++ +
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT-FNTLISGYSNSGQIDEAFGL 313
P++ Y+ I+G CK T+ + DE+ + + T +N LI Y SG++ A L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+MK G+S N TY +LI + EEAK L + M M+G+ P+ YT LI + K
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+V L M K V P++ TY ++
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 182/392 (46%), Gaps = 4/392 (1%)
Query: 16 LDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 75
++ CK G ++ A+K+ KM V PN V++N++I+G G A MV+
Sbjct: 267 INAFCKGGKVEEAVKLFSKME---EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 76 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
G EP++ TY+ L+ G R + ++ + EM ++G PN++VYN+++ G + +
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
A ++ M+ K + +Y L +G C+NG A +L ++L + S ++
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+C G M+ R + P T+I G CK G KAL L+ +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRK-LLDATTFNTLISGYSNSGQIDEAFGLT 314
+ N+ ++GLC+ D A + E+ R ++D ++NTLISG ++DEAF
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 374
EM GL + TY+ LI L EEA + G+ PD TY+ +I K
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 375 HHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
EE D M+ K V P+ Y+ ++ +
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 1/362 (0%)
Query: 43 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 102
V P+ + + IN FCK G + A ++ M +AG P+V T+ T+IDG G +E+
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 103 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
++MVERG+ P ++ Y+ ++ L R + +A VL +M K P+ Y L +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
G L +A+++ + ++ L + + N L+ CK+ M++ G +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL-VD 281
+ +VI C + ALR M+ + P + + I+GLCK A L
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 282 ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
L K ++D T N L+ G +G++DEAF + E+ G +RV+YNTLI+ C
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 401
+EA + M+ +G++PD TY+ LI + EE I D G++PD TY
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 402 IV 403
++
Sbjct: 616 MI 617
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 176/385 (45%), Gaps = 14/385 (3%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C D AL+ + +M L ++ P ++I+G CK G A E+ + GF
Sbjct: 446 CSHLMFDSALRFVGEMLL---RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
RT L+ G G L+E+ R+ E++ RG + V YN+++ ++EA
Sbjct: 503 VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
L +M+ + + PD Y+Y+IL GL + EA++ + + ++ D ++ +++++ CK
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
+ M+++ + P+ +I C+ G AL L M PN
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
Y S I G+ ++ + AK L +E+R L + + LI GY GQ+ + L EM
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 742
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
S + N++TY +I ++G EA L+ M +GI PD ITY I + K+
Sbjct: 743 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 802
Query: 379 EVIALHDYMILKGVIPDQKTYDAIV 403
E KG D++ Y AI+
Sbjct: 803 EA--------FKG--SDEENYAAII 817
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 181/390 (46%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG G D A +KM + P ++Y+ ++ G + + A VL +M
Sbjct: 301 VIDGLGMCGRYDEAFMFKEKM---VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 357
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K GF P+V Y LID + GSL +++ + D MV +GL YN+++ ++G +
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD 417
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A ++L +M+ +Q S+ + LC + AL+ ++L ++ L L+
Sbjct: 418 NAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 477
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK + +G D T ++ G C+ G ++A R+ ++
Sbjct: 478 SGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
+ YN+ I+G C D A +DE+ KR L D T++ LI G N +++EA
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+ K G+ + TY+ +I+ CK EE +E M+ + ++P+ + Y LI + +
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 657
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ L + M KG+ P+ TY +++
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLI 687
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 142/304 (46%), Gaps = 4/304 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
LL G C+ G LD A ++ K++ G + VSYN++I+G C K L A L +M
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEI---LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
VK G +P TY+ LI G +EE+++ D+ G+ P++ Y+ ++ +
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EE + +M+ K++ P+ Y L CR+G L+ AL+L + + ++ + L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ + M GL P+V+ +IDG KLG K L M +
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
PN Y I G + + A L++E+R++ ++ D+ T+ I GY G + EAF
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Query: 313 LTTE 316
+ E
Sbjct: 807 GSDE 810
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%)
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
D F T I+ + G+++EA L ++M+ G++ N VT+NT+I+ L G +EA
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 350 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
+ M+ +G+ P ITY+ L+ + + + M KG P+ Y+ ++ F+ A
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 196/388 (50%), Gaps = 4/388 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ C+ L AL V+ KM + P+ V++ S+++GFC + A ++ M
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKL---GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
VK+G+EP+V Y TLIDG + G L +L L +EM ++GL ++V YN++L L G
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A+++L DM+ + I PD ++ L + + G L EA +L+ ++++ + + + N +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N +C M ++G P+V T T+I G CK ++ ++L+ M
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
++ YN+ I+G C++ VA ++ + R++ D T L+ G +G+I+ A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
+M+ V YN +I+ LCK E+A EL + ++G++PD TYT +I
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYD 400
K E L M +G+I D
Sbjct: 468 KNGPRREADELIRRMKEEGIICQMNAED 495
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 170/391 (43%), Gaps = 71/391 (18%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
S+ +I+ FC+ L A VLG M+K G+EPS+ T+ +L+ G+ + ++ L M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 109 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 168
V+ G PN+VVYN+ L +GLC+NG L
Sbjct: 168 VKSGYEPNVVVYNT-----------------------------------LIDGLCKNGEL 192
Query: 169 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
AL+L N++ K L D + N LL +C S M+ R + PDV T +
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
ID K GN ++A LY MI+ PN YNS INGLC AK D + +
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 289 L-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
+ T+NTLISG+ +DE L M G +A+ TYNTLI+ C+ G A +
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 348 LMKMMIMQGIRPDCITYTTL-------------ITHFNKKHHPEEVIALHDYMIL----- 389
+ M+ + + PD IT+ L + F+ E+ I + Y I+
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Query: 390 -----------------KGVIPDQKTYDAIV 403
+GV PD +TY ++
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 1/275 (0%)
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
E+A + +M+ P + L + ++ + + D +S I
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L++ C+ G M+ G P + T +++ G C + A L M+K
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
+PN+ +YN+ I+GLCK ++A L++E+ K+ L D T+NTL++G SG+ +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+ +M ++ + VT+ LI++ K G +EA+EL K MI + P+ +TY ++I
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ D M KG P+ TY+ +++ F
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 143/329 (43%), Gaps = 1/329 (0%)
Query: 72 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
+MV + PS+ + L+ A E + +M G+ ++ + +++ R
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS 120
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
+ A VL M+ P ++ L G C + +A L ++K + N
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN 180
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
L++ +CK+ M +GL DV T T++ G C G A R+ M+K
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA 310
P++ + + I+ K + D A+ L E+ + + + T+N++I+G G++ +A
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
M S G N VTYNTLI+ CK +E +L + M +G D TY TLI
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQKTY 399
+ + + + +M+ + V PD T+
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITH 389
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 188/372 (50%), Gaps = 8/372 (2%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKG----GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 93
M V P+ + + ++N +C+ G ++ A+E + G E +V TY +LI+GYA
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSL---GLELNVVTYNSLINGYA 272
Query: 94 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 153
G +E R+ M ERG+ N+V Y S++ + G MEEA V + +K + DQ+
Sbjct: 273 MIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQH 332
Query: 154 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 213
Y +L +G CR G + +A+++H+ +++ + + N L+N CKS M
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 214 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 273
L PD +T T++DG C+ G ++AL+L + M + + P + YN + G ++ +
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 274 DVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 332
+L + KR + D + +TL+ G +EA L + + GL + +T N +
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 333 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 392
I+ LCK EAKE++ + + +P TY L + K + +E A+ +YM KG+
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 393 IPDQKTYDAIVT 404
P + Y+ +++
Sbjct: 573 FPTIEMYNTLIS 584
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 189/379 (49%), Gaps = 4/379 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G G ++ +V++ LM+ V N V+Y S+I G+CKKG + AE V +
Sbjct: 267 LINGYAMIGDVEGMTRVLR---LMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ Y L+DGY R G + +++R+ D M+E G+ N + NS++ + G +
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ S M D + PD ++Y L +G CR GY+ EALKL +Q+ + +++ + NILL
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ M+ RG+ D + +T+++ KLG+ +A++L+ ++
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGL 313
+ N I+GLCKM + AK ++D + + A T+ L GY G + EAF +
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M+ G+ YNTLI+ K + +L+ + +G+ P TY LIT +
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 374 KHHPEEVIALHDYMILKGV 392
++ A MI KG+
Sbjct: 624 IGMIDKAYATCFEMIEKGI 642
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 191/389 (49%), Gaps = 18/389 (4%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL+ K G + A+K+ + + + ++++ N +I+G CK + A+E+L ++
Sbjct: 477 LLEALFKLGDFNEAMKLWENV---LARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN 533
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+P+V+TY L GY + G+L+E+ + + M +G+FP I +YN+++ +++ +
Sbjct: 534 IFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN 593
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI-L 193
+ + ++ ++ + + P +Y L G C G + +A F++IE +LN+ +
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATC-----FEMIEKGITLNVNI 648
Query: 194 LNYICKSXXXXXXXXXXGSMITRG-----LPPDVYTKATVIDGNCK--LGNTEKALRLYN 246
+ I S ++ + L P + ++ + L + A + N
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVEN 708
Query: 247 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL--RKRKLLDATTFNTLISGYSNS 304
K PN +YN I GLCK + A+ L +L R + D T+ LI G + +
Sbjct: 709 STPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIA 768
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G I++AF L EM G+ N VTYN LI LCK G + A+ L+ + +GI P+ ITY
Sbjct: 769 GDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITY 828
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVI 393
TLI K + E + L + MI KG++
Sbjct: 829 NTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 207/509 (40%), Gaps = 131/509 (25%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+DG C+TG + A++V M + V N+ NS+ING+CK G L+ AE++ M
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEI---GVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN------------ 121
+P TY TL+DGY R G ++E+L+LCD+M ++ + P ++ YN
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 122 -----------------------SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
++L L++ GD EA K+ +++ + + D + ++
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 159 TEGLCRNGYLTEALKLHNQI-------------------LKFDLIEDAFSL--------- 190
GLC+ + EA ++ + + K +++AF++
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 191 -------NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
N L++ K + RGL P V T +I G C +G +KA
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSN 303
MI+ N+ I + N L ++ D A L+ +K++D F+ L+ GY +
Sbjct: 633 TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLL-----QKIVD---FDLLLPGYQS 684
Query: 304 SGQIDEAFGLTTEMKSLGLS-------------ANRVTYNTLINLLCKNGCDEEAKELMK 350
+ EA TT +K+ ++ N + YN I LCK G E+A++L
Sbjct: 685 LKEFLEA-SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFS 743
Query: 351 ------------------------------------MMIMQGIRPDCITYTTLITHFNKK 374
M ++GI P+ +TY LI K
Sbjct: 744 DLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKL 803
Query: 375 HHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + L + KG+ P+ TY+ ++
Sbjct: 804 GNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 12/351 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V++ G CK ++ A +++ +N+ P +Y ++ +G+ K G L A V M
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIFRCK---PAVQTYQALSHGYYKVGNLKEAFAVKEYM 567
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G P++ Y TLI G ++ L + L E+ RGL P + Y +++ G +
Sbjct: 568 ERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMI 627
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++A +MI+K I + + + L R + EA L +I+ FDL+ + L
Sbjct: 628 DKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ--SL 685
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLP-----PDVYTKATVIDGNCKLGNTEKALRLYNGM 248
++ S + P P+ I G CK G E A +L++ +
Sbjct: 686 KEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745
Query: 249 IKMDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 306
+ D P+ Y I+G + A L DE+ + ++ + T+N LI G G
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 357
+D A L ++ G++ N +TYNTLI+ L K+G EA L + MI +G+
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 159/343 (46%), Gaps = 41/343 (11%)
Query: 69 VLGDMVKA----GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 124
V G++V+ F P+V + ++ YA G ++ +L + D M G P+++ NS+L
Sbjct: 140 VWGELVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLL 197
Query: 125 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 184
L R G+ A V MI + PD ++ +I+ CR+G + +A+
Sbjct: 198 SNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAK-------- 249
Query: 185 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 244
E SL GL +V T ++I+G +G+ E R+
Sbjct: 250 ETESSL--------------------------GLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSN 303
M + N+ Y S I G CK + A+++ + L+++KL+ D + L+ GY
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 304 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
+GQI +A + M +G+ N N+LIN CK+G EA+++ M ++PD T
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 364 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
Y TL+ + + + +E + L D M K V+P TY+ ++ +
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 53/334 (15%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L G K G+L A V + M ++P YN++I+G K L +++ ++
Sbjct: 547 LSHGYYKVGNLKEAFAVKE---YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR 603
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G P+V TY LI G+ G ++++ C EM+E+G+ N+ + + I L+R ++
Sbjct: 604 ARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKID 663
Query: 135 EASKVLSDMID--------------------------------------KHICPDQYSYA 156
EA +L ++D K + P+ Y
Sbjct: 664 EACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYN 723
Query: 157 ILTEGLCRNGYLTEALKLHNQILKFD-LIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 215
+ GLC+ G L +A KL + +L D I D ++ IL++ + M
Sbjct: 724 VAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMAL 783
Query: 216 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
+G+ P++ T +I G CKLGN ++A RL + + + PN YN+ I+GL K
Sbjct: 784 KGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK------ 837
Query: 276 AKNLVDELR-KRKLLDATTFNTLISGYSNSGQID 308
+ N+ + +R K K+++ L+ G G +D
Sbjct: 838 SGNVAEAMRLKEKMIE----KGLVRGSDKQGDVD 867
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 178/360 (49%), Gaps = 6/360 (1%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N +N ++N FCK+G + A++V ++ K +P+V ++ TLI+GY + G+L+E RL
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+M + P++ Y++++ L + M+ A + +M + + P+ + L G RN
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G + + + ++L L D N L+N CK+ MI RGL PD T
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST-DVAKNLVDELR 284
T+IDG C+ G+ E AL + M + + + +++ + G+CK D + L + LR
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 285 KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
D T+ ++ + G F L EM+S G + VTYN L+N LCK G +
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 345 AKELMKMMIMQGIRPDCITYTTLIT-HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
A L+ M+ G+ PD ITY TL+ H + + I + G++ D +Y +IV
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI----GIVADLASYKSIV 594
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 1/330 (0%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K F+ +R L+D + E+++ G N+ V+N ++ + G++
Sbjct: 198 KHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNIS 257
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A KV ++ + + P S+ L G C+ G L E +L +Q+ K D F+ + L+
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N +CK M RGL P+ T+I G+ + G + Y M+ Q
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P++ +YN+ +NG CK A+N+VD + +R L D T+ TLI G+ G ++ A +
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
EM G+ +RV ++ L+ +CK G +A+ ++ M+ GI+PD +TYT ++ F K
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K + L M G +P TY+ ++
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 166/333 (49%), Gaps = 7/333 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G CK G+LD ++ +M + P+ +Y+++IN CK+ + A + +M
Sbjct: 281 LINGYCKVGNLDEGFRLKHQME---KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC 337
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G P+ + TLI G++R G ++ +M+ +GL P+IV+YN+++ ++GD+
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A ++ MI + + PD+ +Y L +G CR G + AL++ ++ + + D + L+
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+CK M+ G+ PD T ++D CK G+ + +L M
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P++ YN +NGLCK+ A L+D + ++ D T+NTL+ G+ + +
Sbjct: 518 PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY-- 575
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
+ +G+ A+ +Y +++N L + D +
Sbjct: 576 -IQKPEIGIVADLASYKSIVNELDRASKDHRNR 607
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 166/333 (49%), Gaps = 1/333 (0%)
Query: 72 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
+++ AGF +V + L++ + + G++ ++ ++ DE+ +R L P +V +N+++ + G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
+++E ++ M PD ++Y+ L LC+ + A L +++ K LI +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
L++ ++ M+++GL PD+ T+++G CK G+ A + +GMI+
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA 310
+P+ Y + I+G C+ + A + E+ + + LD F+ L+ G G++ +A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
EM G+ + VTY +++ CK G + +L+K M G P +TY L+
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K + L D M+ GV+PD TY+ ++
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
G P +VY +++ CK GN A ++++ + K QP + +N+ ING CK+ + D
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 277 KNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
L ++ K R D T++ LI+ ++D A GL EM GL N V + TLI+
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
+NG + KE + M+ +G++PD + Y TL+ F K + D MI +G+ PD
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 396 QKTYDAIVTPF 406
+ TY ++ F
Sbjct: 415 KITYTTLIDGF 425
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 177/366 (48%), Gaps = 4/366 (1%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G L+ A++ KM V+P + S N +++ F K G + DM+ AG P+V
Sbjct: 206 GMLEEAIQCFSKMKRF---RVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTV 262
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
TY +ID + G +E + L +EM RGL P+ V YNS++ + G +++ +
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M D PD +Y L C+ G L L+ + ++ L + S + L++ CK
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
M GL P+ YT ++ID NCK+GN A RL N M+++ + N+ Y +
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
I+GLC A+ L ++ ++ + ++N LI G+ + +D A L E+K G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
+ + + Y T I LC E AK +M M GI+ + + YTTL+ + K +P E +
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 382 ALHDYM 387
L D M
Sbjct: 563 HLLDEM 568
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 189/391 (48%), Gaps = 40/391 (10%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG K G LD + ++M M P+ ++YN++IN FCK G L + E +M
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCE---PDVITYNALINCFCKFGKLPIGLEFYREMK 359
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G +P+V +Y+TL+D + + G ++++++ +M GL PN
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN------------------ 401
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+Y+Y L + C+ G L++A +L N++L+ + + + L+
Sbjct: 402 -----------------EYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +C + G M T G+ P++ + +I G K N ++AL L N + +
Sbjct: 445 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK 504
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
P+L +Y +FI GLC + + AK +++E+++ + ++ + TL+ Y SG E L
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPDCITYTTLITHFN 372
EMK L + VT+ LI+ LCKN +A + + G++ + +T +I
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K + E L + M+ KG++PD+ Y +++
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 204/455 (44%), Gaps = 75/455 (16%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+++D CK G ++ A + ++M + P++V+YNS+I+GF K G L +M
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKF---RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
EP V TY LI+ + ++G L L EM GL PN+V Y++++ + G M
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++A K DM + P++Y+Y L + C+ G L++A +L N++L+ + + + L
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ +C + G M T G+ P++ + +I G K N ++AL L N +
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
+P+L +Y +FI GLC + + AK +++E+++ + ++ + TL+ Y SG E
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 313 LTTEMKSL------------------------------------GLSANRVTYNTLINLL 336
L EMK L GL AN + +I+ L
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 337 CKNGCDEEAKELMKMMIMQGIRPD-----------------------------------C 361
CK+ E A L + M+ +G+ PD
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
+ YT+L+ + + ++ + + MI +G+ PD+
Sbjct: 684 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 189/415 (45%), Gaps = 48/415 (11%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++ CK G L + L+ ++M GN + PN VSY+++++ FCK+G + A + DM
Sbjct: 338 LINCFCKFGKLPIGLEFYREMK---GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P+ TY +LID + G+L ++ RL +EM++ G+ N+V Y +++ L M+
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M + P+ SY L G + + AL+L N++ + D +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD-- 252
+C M G+ + T++D K GN + L L + M ++D
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 253 ----------------------------------EQPNLTIYNSFINGLCKMASTDVAKN 278
Q N I+ + I+GLCK + A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 279 LVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
L +++ ++ L+ D T + +L+ G G + EA L +M +G+ + + Y +L+ L
Sbjct: 635 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 694
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP----EEVIALHDYMI 388
++A+ ++ MI +GI PD + +++ KKH+ +E + L Y++
Sbjct: 695 HCNQLQKARSFLEEMIGEGIHPDEVLCISVL----KKHYELGCIDEAVELQSYLM 745
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 1/296 (0%)
Query: 115 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 174
P V++++ L G +EEA + S M + P S L + G + +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 175 HNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 234
++ F+ NI+++ +CK M RGL PD T ++IDG K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 235 LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATT 293
+G + + + M M +P++ YN+ IN CK + E++ L + +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 294 FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI 353
++TL+ + G + +A +M+ +GL N TY +LI+ CK G +A L M+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 354 MQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
G+ + +TYT LI +E L M GVIP+ +Y+A++ F+ A
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 90/171 (52%), Gaps = 2/171 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+DG CK + A+ +++ G + N+ + ++I+G CK + A + M
Sbjct: 582 VLIDGLCKNKLVSKAVDYFNRISNDFG--LQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ G P Y +L+DG + G++ E+L L D+M E G+ +++ Y S+++ L +
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQL 699
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 184
++A L +MI + I PD+ + + G + EA++L + ++K L+
Sbjct: 700 QKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 197/395 (49%), Gaps = 12/395 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++++G C+ G ++ + K++K+ ++ + P + +YN+IIN + K+ E VL M
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSV---KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G + TY L++ + G + ++ +L DEM ERG+ ++ VY S++ W R G+M
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A + ++ +K + P Y+Y L +G+C+ G + A L N++ + N L
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA----LRLYNGMI 249
++ C+ M +G DV+T T+ +L ++A R+ G +
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQID 308
K+ + Y + I+ CK + + AK L E+ + + +A T+N +I Y G+I
Sbjct: 466 KL----STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
EA L M++ G+ + TY +LI+ C +EA L M ++G+ + +TYT +I
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ +K +E L+D M KG D K Y A++
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 164/346 (47%), Gaps = 1/346 (0%)
Query: 59 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 118
K+ + L E+ MV +G + +V + +++G R G +E+S +L E +G+ P
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
YN+I+ + D VL M + ++ +Y +L E +NG +++A KL +++
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 179 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 238
+ + D L+++ C+ + +GL P YT +IDG CK+G
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTL 297
A L N M ++N+ I+G C+ D A + D + ++ D T NT+
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 357
S ++ + DEA M G+ + V+Y LI++ CK G EEAK L M +G+
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 358 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+P+ ITY +I + K+ +E L M G+ PD TY +++
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG CK G + A +M N M V V +N++I+G+C+KG + A + M
Sbjct: 370 LIDGVCKVGEMGAAEILM---NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF+ V T T+ + R +E+ + M+E G+ + V Y +++ + G++E
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ +M K + P+ +Y ++ C+ G + EA KL + + D+++ L+
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ C + M +GL + T +I G K G +++A LY+ M +
Sbjct: 547 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYT 606
Query: 255 PNLTIYNSFINGL 267
+ +Y + I +
Sbjct: 607 IDNKVYTALIGSM 619
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 137/321 (42%), Gaps = 46/321 (14%)
Query: 92 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 151
Y G EE LR+ D MV++GL + L + ++ ++ M+D +
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 211
YS I+ EGLCR G + ++ KL + FS+
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKE----------FSV--------------------- 252
Query: 212 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL---- 267
+G+ P+ YT T+I+ K ++ G++K+ ++ + +YN L
Sbjct: 253 ----KGIKPEAYTYNTIINAYVK----QRDFSGVEGVLKVMKKDGV-VYNKVTYTLLMEL 303
Query: 268 -CKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 325
K A+ L DE+R+R + D + +LIS G + AF L E+ GLS +
Sbjct: 304 SVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS 363
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 385
TY LI+ +CK G A+ LM M +G+ + + TLI + +K +E ++D
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 386 YMILKGVIPDQKTYDAIVTPF 406
M KG D T + I + F
Sbjct: 424 VMEQKGFQADVFTCNTIASCF 444
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 179/358 (50%), Gaps = 7/358 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL+ K D+ + + + +M V + + N ++N FC+ LA LG M+
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIM---GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K GFEP + T+ +LI+G+ +EE++ + ++MVE G+ P++V+Y +I+ L ++G +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A + M + I PD Y L GLC +G +A L + K + D + N L+
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ K MI + P+++T ++I+G C G ++A +++ M
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGL 313
P++ Y S ING CK D A + E+ ++ L T T+ TLI G+ G+ + A +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEA---KELMKMMIMQGIRPDCITYTTLI 368
+ M S G+ N TYN L++ LC NG ++A E M+ M G+ P+ TY L+
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 142/311 (45%), Gaps = 1/311 (0%)
Query: 97 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 156
E+L L MVE P+I+ + +L + + + + + + D Y+
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 157 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 216
+L C++ A +++K D + L+N C M+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
G+ PDV T+ID CK G+ AL L++ M +P++ +Y S +NGLC A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 277 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
+L+ + KRK+ D TFN LI + G+ +A L EM + ++ N TY +LIN
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
C GC +EA+++ +M +G PD + YT+LI F K ++ + + M KG+ +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 396 QKTYDAIVTPF 406
TY ++ F
Sbjct: 352 TITYTTLIQGF 362
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 152/348 (43%), Gaps = 42/348 (12%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++D CK G ++ AL + +M + P+ V Y S++NG C G A+ +L M
Sbjct: 183 IIDSLCKNGHVNYALSLFDQME---NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K +P V T+ LID + + G ++ L +EM+ + PNI Y S++ G ++
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M K PD +Y L G C+ + +A+K+ ++ + L + + L+
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ M++RG+PP++ T ++ C G +KAL ++ M K +
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 255 ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL----------------------- 288
PN+ YN ++GLC + A + +++RKR++
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 289 -------------LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 323
+ T+ T+ISG G EA L +MK G+S
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 122/274 (44%), Gaps = 34/274 (12%)
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA + + M++ P + L + + + L + + + D ++ N+L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N C+S G M+ G PD+ T ++I+G C E+A+ + N M++M +
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLT 314
P++ +Y + I+ LCK +G ++ A L
Sbjct: 175 PDVVMYTTIIDSLCK----------------------------------NGHVNYALSLF 200
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 374
+M++ G+ + V Y +L+N LC +G +A L++ M + I+PD IT+ LI F K+
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 375 HHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
+ L++ MI + P+ TY +++ F +
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VLL C G + AL + + M + V PN +YN +++G C G L A V DM
Sbjct: 392 VLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K + + TY +I G + G ++ ++ L + +G+ PN+V Y +++ L+R G
Sbjct: 452 RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLK 511
Query: 134 EEASKVLSDM 143
EA + M
Sbjct: 512 HEAHVLFRKM 521
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 179/356 (50%), Gaps = 1/356 (0%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+ V++ S++NG+C + A + ++ GF+P+V TY TLI + L ++ L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
++M G PN+V YN+++ L G +A+ +L DM+ + I P+ ++ L + +
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G L EA +L+N +++ + D F+ L+N +C M G P+
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
T+I G CK E ++++ M + N Y I G C + DVA+ + +++
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 285 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
R+ D T+N L+ G +G++++A + M+ + N VTY +I +CK G E
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 399
+A +L + +G++P+ ITYTT+I+ F ++ E +L M G +P++ Y
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 156/316 (49%), Gaps = 4/316 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ CK L+ A+++ N M N PN V+YN+++ G C+ G A +L DM+
Sbjct: 194 LIRCLCKNRHLNHAVELF---NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K EP+V T+ LID + + G L E+ L + M++ ++P++ Y S++ L +G ++
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ M P++ Y L G C++ + + +K+ ++ + ++ + + +L+
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
C M +R PPD+ T ++DG C G EKAL ++ M K +
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
N+ Y I G+CK+ + A +L L + + + T+ T+ISG+ G I EA L
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490
Query: 314 TTEMKSLGLSANRVTY 329
+MK G N Y
Sbjct: 491 FKKMKEDGFLPNESVY 506
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 151/339 (44%), Gaps = 1/339 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A ++ MV + PS+ + L+ A+ + + L ++M G+ P + N +++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
+ AS L M+ PD ++ L G C + +A+ L +QIL
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
+ + L+ +CK+ M T G P+V T ++ G C++G A L
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 304
M+K +PN+ + + I+ K+ AK L + + + + D T+ +LI+G
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G +DEA + M+ G N V Y TLI+ CK+ E+ ++ M +G+ + ITY
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
T LI + P+ + + M + PD +TY+ ++
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 36/257 (14%)
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ NI+++ +C S G M+ G PD+ T ++++G C E A+ L++ +
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 249 IKM-----------------------------------DEQPNLTIYNSFINGLCKMAS- 272
+ M +PN+ YN+ + GLC++
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 273 TDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 332
D A L D +++R + TF LI + G++ EA L M + + + TY +L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 333 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 392
IN LC G +EA+++ +M G P+ + YTTLI F K E+ + + M KGV
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 393 IPDQKTYDAIVTPFLLA 409
+ + TY ++ + L
Sbjct: 360 VANTITYTVLIQGYCLV 376
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 2/248 (0%)
Query: 157 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 216
IL GL N +AL L +++ + LL+ I K M
Sbjct: 54 ILRNGL-HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
G+PP + T V+ C +A M+K+ +P+L + S +NG C + A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 277 KNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
L D++ + T+ TLI + ++ A L +M + G N VTYN L+
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
LC+ G +A L++ M+ + I P+ IT+T LI F K E L++ MI V PD
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 396 QKTYDAIV 403
TY +++
Sbjct: 293 VFTYGSLI 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+ G C G D+A +V N M+ P+ +YN +++G C G + A + M
Sbjct: 368 VLIQGYCLVGRPDVAQEV---FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K + ++ TY +I G + G +E++ L + +G+ PN++ Y +++ R G +
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 134 EEASKVLSDMIDKHICPDQYSY 155
EA + M + P++ Y
Sbjct: 485 HEADSLFKKMKEDGFLPNESVY 506
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 40/347 (11%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M P+ V++ +++NG C +G +L A ++ MV+ G +P Y T+I+G + G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
E +L L +M E + ++V+YN+I+ L + G A + ++M DK I PD +Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ + CR+G T+A Q+L+ MI R
Sbjct: 117 MIDSFCRSGRWTDA----EQLLR-------------------------------DMIERQ 141
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ PDV T + +I+ K G +A +Y M++ P YNS I+G CK + AK
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
++D + + D TF+TLI+GY + ++D + EM G+ AN VTY TLI+
Sbjct: 202 RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 383
C+ G + A++L+ +MI G+ P+ IT+ +++ K + A+
Sbjct: 262 CQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 137/273 (50%), Gaps = 3/273 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+++G CK G + AL ++ KM + + V YN+II+ CK G + A+ + +M
Sbjct: 47 IINGLCKMGDTESALNLLSKME---ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G P V TY+ +ID + R G ++ +L +M+ER + P++V +++++ L + G +
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ DM+ + I P +Y + +G C+ L +A ++ + + D + + L+
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N CK+ M RG+ + T T+I G C++G+ + A L N MI
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
PN + S + LC A ++++L+K +
Sbjct: 284 PNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 154/316 (48%), Gaps = 12/316 (3%)
Query: 8 GCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 63
GC + V L++G C G + AL ++ +M V Y +IING CK G
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRM-------VEEGHQPYGTIINGLCKMGDT 57
Query: 64 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 123
A +L M + + V Y +ID + G + L EM ++G+FP+++ Y+ +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 124 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
+ R G +A ++L DMI++ I PD +++ L L + G ++EA +++ +L+ +
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
+ N +++ CK SM ++ PDV T +T+I+G CK + +
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYS 302
++ M + N Y + I+G C++ D A++L++ + + + TF ++++
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Query: 303 NSGQIDEAFGLTTEMK 318
+ ++ +AF + +++
Sbjct: 298 SKKELRKAFAILEDLQ 313
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 153/335 (45%), Gaps = 40/335 (11%)
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
MV+ G P V T+ TL++G G + ++L L D MVE G P Y +I+ L + GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
E A +LS M + HI Y + + LC++G+ A L +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTE--------------- 101
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
M +G+ PDV T + +ID C+ G A +L MI+
Sbjct: 102 --------------------MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAF 311
P++ +++ IN L K A+ + ++ +R + T T+N++I G+ ++++A
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+ M S S + VT++TLIN CK + E+ M +GI + +TYTTLI F
Sbjct: 202 RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ + L + MI GV P+ T+ +++
Sbjct: 262 CQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 110/225 (48%), Gaps = 5/225 (2%)
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D + L+N +C M+ G P T+I+G CK+G+TE AL L
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNS 304
+ M + + ++ IYN+ I+ LCK A+NL E+ + + D T++ +I + S
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
G+ +A L +M ++ + VT++ LIN L K G EA+E+ M+ +GI P ITY
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
++I F K+ + + D M K PD T+ ++ + A
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 192/399 (48%), Gaps = 8/399 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G CK A ++M++M + PN +SY+++IN C G + LA L M+
Sbjct: 252 LINGLCKEHDYKGAFELMREM---VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSILYWLYRHGDM 133
K G P++ T ++L+ G G+ ++L L ++M+ GL PN+V YN+++ HG++
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A V S M + P+ +Y L G + G L A+ + N++L + +
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNM 428
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +C+ M P V T I G C G + A +++ M +
Sbjct: 429 VEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Query: 254 -QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
PN+ YN ++GL K + A L E+ R + ++T+NTL+ G N+G A
Sbjct: 489 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIAL 548
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI--MQGIRPDCITYTTLIT 369
L +M G S + +T N +I CK G E A +++ ++ + RPD I+YT +I
Sbjct: 549 QLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIW 608
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
+ + E+ + L + MI G++P T+ ++ F+L
Sbjct: 609 GLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFIL 647
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 195/396 (49%), Gaps = 11/396 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VLL CK +D A K++ +M + P++VSY ++I+ C+ G L +E G
Sbjct: 186 VLLKALCKNNKVDGAKKLLVEM---SNKGCCPDAVSYTTVISSMCEVG---LVKE--GRE 237
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ FEP V Y LI+G + + + L EMVE+G+ PN++ Y++++ L G +
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK-FDLIEDAFSLNI 192
E A L+ M+ + P+ Y+ + L +G G +AL L NQ+++ F L + + N
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L+ C M G P++ T ++I+G K G+ + A+ ++N M+
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAF 311
PN+ +Y + + LC+ + A++L++ + K + TFN I G ++G++D A
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 312 GLTTEMKSLG-LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
+ +M+ N VTYN L++ L K EEA L + + M+G+ TY TL+
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
P + L M++ G PD+ T + I+ +
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 168/356 (47%), Gaps = 7/356 (1%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
+ S+I+ + + G A E+ + + G +PSV+ Y ++D ++ + +M
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
G PN+ YN +L L ++ ++ A K+L +M +K CPD SY + +C G +
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 229
E +L +F+ + + N L+N +CK M+ +G+ P+V + +T+I
Sbjct: 234 EGRELAE---RFEPVVSVY--NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 289
+ C G E A M+K PN+ +S + G +T A +L +++ + L
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL 348
Query: 290 --DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
+ +NTL+ G+ + G I +A + + M+ +G S N TY +LIN K G + A
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVY 408
Query: 348 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ M+ G P+ + YT ++ + +E +L + M + P T++A +
Sbjct: 409 IWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 185/366 (50%), Gaps = 4/366 (1%)
Query: 42 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 101
++ PN +S+N +I CK + A EV M + P TY TL+DG + ++E+
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
+ L DEM G P+ V+YN ++ L + GD+ +K++ +M K P++ +Y L G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 162 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 221
LC G L +A+ L +++ I + + L+N + K SM RG +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
+ + +I G K G E+A+ L+ M + +PN+ +Y+ ++GLC+ + AK +++
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 282 ELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
+ L +A T+++L+ G+ +G +EA + EM G S N+ Y+ LI+ LC G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK---GVIPDQK 397
+EA + M+ GI+PD + Y+++I + + L+ M+ + PD
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 398 TYDAIV 403
TY+ ++
Sbjct: 542 TYNILL 547
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 171/346 (49%), Gaps = 9/346 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+DG CK G L K++ M L PN V+YN++I+G C KG L A +L M
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFL---KGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V + P+ TY TLI+G + +++RL M ERG N +Y+ ++ L++ G
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EEA + M +K P+ Y++L +GLCR G EA ++ N+++ + +A++ + L
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ K+ M G + + + +IDG C +G ++A+ +++ M+ +
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDEL----RKRKLLDATTFNTLISGYSNSGQIDE 309
+P+ Y+S I GLC + S D A L E+ + D T+N L+ G I
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISR 558
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCK--NGCDEEAKELMKMMI 353
A L M G + +T NT +N L + N CD+ L ++++
Sbjct: 559 AVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 155/360 (43%), Gaps = 40/360 (11%)
Query: 49 SYNSIINGFCKKG----GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
S+NS++N +G GL + V+ + P+ ++ +I + ++ ++ +
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
M ER P+ Y +++ L + ++EA +L +M + P Y +L +GLC+
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G LT KL + +M +G P+ T
Sbjct: 270 KGDLTRVTKLVD-----------------------------------NMFLKGCVPNEVT 294
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
T+I G C G +KA+ L M+ PN Y + INGL K A L+ +
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 285 KRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+R L+ ++ LISG G+ +EA L +M G N V Y+ L++ LC+ G
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
EAKE++ MI G P+ TY++L+ F K EE + + M G ++ Y ++
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 168/365 (46%), Gaps = 6/365 (1%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
+ +S+I + G E++L + R++ + Y + ++++ L M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 109 V-ERGLFPNIVVYNSILYWLYR----HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 163
V E ++ +NS+L + H +E V++ ++ +I P+ S+ ++ + LC
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 223
+ ++ A+++ + + + D ++ L++ +CK M + G P
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
+IDG CK G+ + +L + M PN YN+ I+GLC D A +L++ +
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 284 RKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
K + + T+ TLI+G + +A L + M+ G N+ Y+ LI+ L K G
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
EEA L + M +G +P+ + Y+ L+ ++ P E + + MI G +P+ TY ++
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 403 VTPFL 407
+ F
Sbjct: 439 MKGFF 443
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 2/356 (0%)
Query: 53 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 112
++ F + G L A ++ DM G PS T +++ G +E + + DEM RG
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 113 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 172
+ P+ Y ++ +R G ++EA + L+ MI + PD + ++ LC NG + A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 173 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 232
+++ + + L++ +CK M+ G P+VYT +IDG
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 233 CKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-D 290
CK G TEKA RL+ +++ D +PN+ Y S I G CK + A+ L ++++ L +
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 291 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 350
T+ TLI+G+ +G A+ L M G N TYN I+ LCK EA EL+
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 351 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
G+ D +TYT LI K++ + +A M G D + + ++ F
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 191/392 (48%), Gaps = 5/392 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+L+ A + G ++ A V +M++ V P+S SY ++ G + G + A+ L M+
Sbjct: 188 VLEIAVELGLIEYAENVFDEMSV---RGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMI 244
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF P T ++ G + ++ +M++ G PN++ + S++ L + G ++
Sbjct: 245 QRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIK 304
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNIL 193
+A ++L +M+ P+ Y++ L +GLC+ G+ +A +L ++++ D + + + +
Sbjct: 305 QAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSM 364
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ CK M +GL P+V T T+I+G+CK G+ +A L N M
Sbjct: 365 IGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGF 424
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
PN+ YN+ I+ LCK + A L+++ L D T+ LI I++A
Sbjct: 425 MPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALA 484
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
M G A+ N LI C+ +E++ L ++++ G+ P TYT++I+ +
Sbjct: 485 FFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYC 544
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
K+ + + M G +PD TY ++++
Sbjct: 545 KEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 176/372 (47%), Gaps = 5/372 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++L C+ G ++ A+ +KM + PN +++ S+I+G CKKG + A E+L +M
Sbjct: 257 LILTALCENGLVNRAIWYFRKMIDL---GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF-PNIVVYNSILYWLYRHGD 132
V+ G++P+V T+ LIDG + G E++ RL ++V + PN+ Y S++ +
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+ A + S M ++ + P+ +Y L G C+ G A +L N + + + ++ N
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
++ +CK + GL D T +I CK + +AL + M K
Sbjct: 434 AIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTG 493
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAF 311
+ ++ + N I C+ ++ L + L+ T+ ++IS Y G ID A
Sbjct: 494 FEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLAL 553
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
MK G + TY +LI+ LCK +EA +L + MI +G+ P +T TL +
Sbjct: 554 KYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEY 613
Query: 372 NKKHHPEEVIAL 383
K++ + L
Sbjct: 614 CKRNDSANAMIL 625
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 126/293 (43%), Gaps = 7/293 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G CK GS A ++M NLM PN +YN+ I+ CKK A E+L
Sbjct: 399 LINGHCKAGSFGRAYELM---NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G E TY LI + + ++L M + G ++ + N ++ R M+
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
E+ ++ ++ + P + +Y + C+ G + ALK + + + + D+F+ L+
Sbjct: 516 ESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLI 575
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK +MI RGL P T+ T+ CK ++ A+ L + +D++
Sbjct: 576 SGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL---LEPLDKK 632
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQ 306
+ + + LC VA + L K D T + S SG+
Sbjct: 633 LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 685
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 182/374 (48%), Gaps = 4/374 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D C+ L LAL + KM + P+ V++ S++NGFC A ++ +V
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKL---GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G+EP+V Y T+ID G + +L + M + G+ P++V YNS++ L+ G
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
++++LSDM+ I PD +++ L + + G L EA K +N++++ + + + N L+
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N +C ++++G P+ T T+I+G CK + +++ M +
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
+ YN+ G C+ A+ ++ + + D TFN L+ G + G+I +A
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+++ +TYN +I LCK E+A L + ++G+ PD ITY T++ +
Sbjct: 417 LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
Query: 374 KHHPEEVIALHDYM 387
K E L+ M
Sbjct: 477 KRLWREAHELYRKM 490
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 175/356 (49%), Gaps = 9/356 (2%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
S+ ++I+ FC+ L LA LG M+K GFEPS+ T+ +L++G+ E++ L D++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 109 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 168
V G PN+V+YN+I+ L G + A VL M I PD +Y L L +G
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 169 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
+ ++ + +++ + D + + L++ K MI R + P++ T ++
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
I+G C G ++A ++ N ++ PN YN+ ING CK D ++ + + +
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 289 -LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA-- 345
D T+NTL GY +G+ A + M S G+ + T+N L++ LC +G +A
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 346 --KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 399
++L K + GI ITY +I K E+ L + LKGV PD TY
Sbjct: 416 RLEDLQKSKTVVGI----ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 153/305 (50%), Gaps = 4/305 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++D C+ G ++ AL V+K M M + P+ V+YNS+I G ++ +L DM+
Sbjct: 190 IIDSLCEKGQVNTALDVLKHMKKM---GIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P V T++ LID Y + G L E+ + +EM++R + PNIV YNS++ L HG ++
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA KVL+ ++ K P+ +Y L G C+ + + +K+ + + + D F+ N L
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
C++ G M++ G+ PD+YT ++DG C G KAL + K
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
+ YN I GLCK + A L L + + D T+ T++ G EA L
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Query: 314 TTEMK 318
+M+
Sbjct: 487 YRKMQ 491
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 143/313 (45%), Gaps = 1/313 (0%)
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++L L +M E P+IV ++ +L + + E + + I D YS+
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + CR L+ AL +++K + L+N C ++ G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV-A 276
P+V T+ID C+ G AL + M KM +P++ YNS I L + V A
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 277 KNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+ L D +R D TF+ LI Y GQ+ EA EM ++ N VTYN+LIN L
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C +G +EAK+++ +++ +G P+ +TY TLI + K ++ + + M GV D
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 397 KTYDAIVTPFLLA 409
TY+ + + A
Sbjct: 360 FTYNTLYQGYCQA 372
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 145/359 (40%), Gaps = 49/359 (13%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
+S+ +N + FC DM ++ PS+ ++ L+ A+ E + L
Sbjct: 56 HSIKFNDALTLFC-------------DMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLF 102
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+ G+ ++ + +++ R + A L M+ P ++ L G C
Sbjct: 103 RHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 162
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
EA+ L +QI+ + N +++ +C+ M G+ PDV T
Sbjct: 163 NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY 222
Query: 226 -----------------------------------ATVIDGNCKLGNTEKALRLYNGMIK 250
+ +ID K G +A + YN MI+
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQ 282
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 309
PN+ YNS INGLC D AK +++ L + +A T+NTLI+GY + ++D+
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+ M G+ + TYNTL C+ G A++++ M+ G+ PD T+ L+
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 188/382 (49%), Gaps = 4/382 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G C+ G ++ + ++ ++ T PN V Y ++I+G CKKG + A+++ +M
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIEL---TEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G + RTY LI+G + G ++ + ++M E G+FPN+ YN ++ L + G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++A +V +M ++ + + +Y L GLCR L EA K+ +Q+ + + + N L
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ C + +RGL P + T ++ G C+ G+T A ++ M +
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
+P+ Y I+ + + + A L + + L+ D T++ LI G+ GQ++EA
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L M N V YNT+I CK G A +L+K M + + P+ +Y +I
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Query: 373 KKHHPEEVIALHDYMILKGVIP 394
K+ +E L + MI G+ P
Sbjct: 525 KERKSKEAERLVEKMIDSGIDP 546
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 178/356 (50%), Gaps = 1/356 (0%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
S+ +I G C+ G + + ++L ++ + GF P+V Y TLIDG + G +E++ L EM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 109 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 168
+ GL N Y ++ L+++G ++ ++ M + + P+ Y+Y + LC++G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 169 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
+A ++ +++ + + + + N L+ +C+ M + G+ P++ T T+
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
IDG C +G KAL L + P+L YN ++G C+ T A +V E+ +R +
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 289 LDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
+ T+ LI ++ S +++A L M+ LGL + TY+ LI+ C G EA
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 348 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
L K M+ + P+ + Y T+I + K+ + L M K + P+ +Y ++
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 177/392 (45%), Gaps = 70/392 (17%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS---------------------------- 81
Y IIN + + L L+ +MV GF P
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 82 ------VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
V ++ LI G G +E+S L E+ E G PN+V+Y +++ + G++E+
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
A + +M + ++ +Y +L GL +NG + +++ +
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK------------------ 258
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
M G+ P++YT V++ CK G T+ A ++++ M +
Sbjct: 259 -----------------MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLT 314
N+ YN+ I GLC+ + A +VD+++ + + T+NTLI G+ G++ +A L
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 374
++KS GLS + VTYN L++ C+ G A +++K M +GI+P +TYT LI F +
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 375 HHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ E+ I L M G++PD TY ++ F
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 172/363 (47%), Gaps = 5/363 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG CK G ++ A + +M + + N +Y +ING K G E+ M
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKL---GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P++ TY +++ + G +++ ++ DEM ERG+ NIV YN+++ L R +
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA+KV+ M I P+ +Y L +G C G L +AL L + L + NIL+
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ C+ M RG+ P T +ID + N EKA++L M ++
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
P++ Y+ I+G C + A L + ++ + +NT+I GY G A L
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
EM+ L+ N +Y +I +LCK +EA+ L++ MI GI P + +LI+
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS-TSILSLISRAKN 559
Query: 374 KHH 376
H
Sbjct: 560 DSH 562
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 151/293 (51%), Gaps = 3/293 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+++ CK G A +V +M V N V+YN++I G C++ L A +V+ M
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMR---ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G P++ TY TLIDG+ G L ++L LC ++ RGL P++V YN ++ R GD
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A+K++ +M ++ I P + +Y IL + R+ + +A++L + + L+ D + ++L+
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ C SM+ + P+ T+I G CK G++ +AL+L M + +
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQI 307
PN+ Y I LCK + A+ LV+++ + +T+ +LIS N +
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHV 563
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 170/366 (46%), Gaps = 42/366 (11%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
PN V++ ++INGFCK+G + A ++ M + G EP + Y+TLIDGY + G L +L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
+ + +G+ ++VV++S + + GD+ AS V M+ + I P+ +Y IL +GLC+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
+G + EA ++ QILK RG+ P + T
Sbjct: 404 DGRIYEAFGMYGQILK-----------------------------------RGMEPSIVT 428
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL-VDEL 283
+++IDG CK GN LY MIKM P++ IY ++GL K A V L
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 284 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL------LC 337
+ L+ FN+LI G+ + DEA + M G+ + T+ T++ + C
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFC 548
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
K+ +L +M I D +I K H E+ + +I + PD
Sbjct: 549 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 608
Query: 398 TYDAIV 403
TY+ ++
Sbjct: 609 TYNTMI 614
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 193/422 (45%), Gaps = 45/422 (10%)
Query: 16 LDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 75
+D K+G L A V K+M L G S PN V+Y +I G C+ G + A + G ++K
Sbjct: 363 IDVYVKSGDLATASVVYKRM-LCQGIS--PNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 76 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
G EPS+ TY++LIDG+ + G+L L ++M++ G P++V+Y ++ L + G M
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN---------------QILK 180
A + M+ + I + + L +G CR EALK+ +++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 181 FDLIEDAFS--------------------------LNILLNYICKSXXXXXXXXXXGSMI 214
++EDAF N++++ + K ++I
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
+ PD+ T T+I G C L ++A R++ + PN I+ LCK D
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 659
Query: 275 VAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 333
A + + K +A T+ L+ +S S I+ +F L EM+ G+S + V+Y+ +I
Sbjct: 660 GAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719
Query: 334 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 393
+ LCK G +EA + I + PD + Y LI + K E L+++M+ GV
Sbjct: 720 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Query: 394 PD 395
PD
Sbjct: 780 PD 781
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 193/431 (44%), Gaps = 45/431 (10%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G CK G +D A + K +M + P+ ++Y+++I+G+ K G L + ++ +
Sbjct: 292 LINGFCKRGEMDRAFDLFK---VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G + V +++ ID Y + G L + + M+ +G+ PN+V Y ++ L + G +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA + ++ + + P +Y+ L +G C+ G L L+ ++K D +L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ + K M+ + + +V ++IDG C+L ++AL+++ M +
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 255 PNLTIYNSFI------NGLCKMASTDVAKNLVDELRKRKL-------------------- 288
P++ + + + + CK + L D +++ K+
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 588
Query: 289 ----------------LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 332
D T+NT+I GY + ++DEA + +K N VT L
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 648
Query: 333 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 392
I++LCKN + A + +M +G +P+ +TY L+ F+K E L + M KG+
Sbjct: 649 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708
Query: 393 IPDQKTYDAIV 403
P +Y I+
Sbjct: 709 SPSIVSYSIII 719
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 150/326 (46%), Gaps = 10/326 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+DG K G L L M+ M G S+ N V +NS+I+G+C+ A +V M
Sbjct: 466 VLVDGLSKQG---LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 74 VKAGFEPSVRTYATLI------DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 127
G +P V T+ T++ D + + L+L D M + +I V N +++ L
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 128 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 187
++ +E+ASK +++I+ + PD +Y + G C L EA ++ + +
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 188 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
+L IL++ +CK+ M +G P+ T ++D K + E + +L+
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 306
M + P++ Y+ I+GLCK D A N+ + KLL D + LI GY G+
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTL 332
+ EA L M G+ + + L
Sbjct: 763 LVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 18 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 77
G C LD A ++ + L+ PN+V+ +I+ CK + A + M + G
Sbjct: 616 GYCSLRRLDEAERIFE---LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Query: 78 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 137
+P+ TY L+D +++ +E S +L +EM E+G+ P+IV Y+ I+ L + G ++EA+
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732
Query: 138 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF-----DLIEDAFS 189
+ ID + PD +YAIL G C+ G L EA L+ +L+ DL++ A S
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALS 789
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 2/195 (1%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
++ RG + + V+ G + E A RL + ++ PN+ + + ING CK
Sbjct: 243 VMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 273 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
D A +L + +R + D ++TLI GY +G + L ++ G+ + V +++
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
I++ K+G A + K M+ QGI P+ +TYT LI + E ++ ++ +G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 392 VIPDQKTYDAIVTPF 406
+ P TY +++ F
Sbjct: 422 MEPSIVTYSSLIDGF 436
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 178/345 (51%), Gaps = 16/345 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G C+ GS D A K+ +M +GN +P+SV++N++++GFCK G ++ A E+L
Sbjct: 238 ILISGLCQRGSADDARKLFYEMQ-TSGN--YPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K GF +R Y++LIDG R ++ L M+++ + P+I++Y ++ L + G +
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
E+A K+LS M K I PD Y Y + + LC G L E L ++ + + DA + IL
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM----- 248
+ +C++ + G P V T +IDG CK G ++A L + M
Sbjct: 415 ICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRP 474
Query: 249 ----IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNS 304
+++ N + +G A D+A + D D ++N LI+G+ +
Sbjct: 475 ASLFLRLSHSGNRSFDTMVESGSILKAYRDLA-HFADTGSSP---DIVSYNVLINGFCRA 530
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
G ID A L ++ GLS + VTYNTLIN L + G +EEA +L
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 189/431 (43%), Gaps = 44/431 (10%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG-GLLLAEEVLGD 72
VL+ K G +A K ++ M P+ +YN I+ ++ +LA V +
Sbjct: 132 VLISAYAKMG---MAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNE 188
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M+K P++ T+ L+DG + G ++ ++ D+M RG+ PN V Y ++ L + G
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
++A K+ +M PD ++ L +G C+ G + EA +L K + +
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L++ + ++ +M+ + + PD+ +I G K G E AL+L + M
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAF 311
P+ YN+ I LC + ++L E+ + DA T LI +G + EA
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM------------------- 352
+ TE++ G S + T+N LI+ LCK+G +EA+ L+ M
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRS 488
Query: 353 ---------IMQGIR-----------PDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 392
I++ R PD ++Y LI F + + + L + + LKG+
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 393 IPDQKTYDAIV 403
PD TY+ ++
Sbjct: 549 SPDSVTYNTLI 559
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 156/360 (43%), Gaps = 10/360 (2%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
+ +I+ + G L + L ++ G + LI YA+ G E+++ M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEE-----ASKVLSDMIDKHICPDQYSYAILTEGLCR 164
E P++ YN IL + R EE A V ++M+ + P+ Y++ IL +GL +
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G ++A K+ + + + + + IL++ +C+ M T G PD
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
++DG CKLG +A L K L Y+S I+GL + A L +
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 285 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
K+ + D + LI G S +G+I++A L + M S G+S + YN +I LC G E
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
E + L M PD T+T LI + E + + G P T++A++
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 42/300 (14%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPN-SVSYNSIINGFCKKGGLLLAEEVLGD 72
L+DG CK+G L A ++ KM + S++ S S N + + G +L A L
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAH 507
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
G P + +Y LI+G+ R G ++ +L+L + + +GL P+ V YN+++ L+R G
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL-KFDLIEDAFSLN 191
EEA K+ D P Y +++T CR + A L + L K ++D
Sbjct: 568 EEEAFKLFYAKDDFRHSPAVYR-SLMTWS-CRKRKVLVAFNLWMKYLKKISCLDD----- 620
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
A I+ K G TE+ALR +
Sbjct: 621 --------------------------------ETANEIEQCFKEGETERALRRLIELDTR 648
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 310
++ L Y ++ GLC+ A + LR++K+L + LI G Q+D A
Sbjct: 649 KDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAA 708
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 179/358 (50%), Gaps = 2/358 (0%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
+++I+ + G + +A+ + G+ +V ++ LI Y R G EE++ + + M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 111 RGLFPNIVVYNSILYWLYRHG-DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
GL PN+V YN+++ + G + ++ +K +M + PD+ ++ L R G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 229
A L +++ + +D FS N LL+ ICK M + + P+V + +TVI
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 289
DG K G ++AL L+ M + + YN+ ++ K+ ++ A +++ E+ +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 290 -DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
D T+N L+ GY G+ DE + TEMK + N +TY+TLI+ K G +EA E+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 349 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ G+R D + Y+ LI K ++L D M +G+ P+ TY++I+ F
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 164/362 (45%), Gaps = 40/362 (11%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE--EVLG 71
L+ ++G + A+ V N M + PN V+YN++I+ C KGG+ + +
Sbjct: 273 ALISAYGRSGLHEEAISVF---NSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFD 328
Query: 72 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
+M + G +P T+ +L+ +R G E + L DEM R + ++ YN++L + + G
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
M+ A ++L+ M K I P+ SY+ + +G + G EAL L ++ + D S N
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
LL+ K M + G+ DV T ++ G K G ++ +++ M +
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAF 311
PNL Y +TLI GYS G EA
Sbjct: 509 HVLPNLLTY----------------------------------STLIDGYSKGGLYKEAM 534
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+ E KS GL A+ V Y+ LI+ LCKNG A L+ M +GI P+ +TY ++I F
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 372 NK 373
+
Sbjct: 595 GR 596
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 154/340 (45%), Gaps = 22/340 (6%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
LLD CK G +DLA +++ +M + + PN VSY+++I+GF K G A + G+M
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPV---KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G +Y TL+ Y + G EE+L + EM G+ ++V YN++L + G
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+E KV ++M +H+ P+ +Y+ L +G + G EA+++ + L D + L
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ +CK+ M G+ P+V T ++ID + +++ NG
Sbjct: 556 IDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG------ 609
Query: 254 QPNLTIYNSFINGLCKMASTDVAK---NLVDELRKRKLLDATTFNTLISGYSNSGQIDEA 310
+L +S ++ L + V + L E R D G I E
Sbjct: 610 -GSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCE------EGMQELSCILEV 662
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 350
F +M L + N VT++ ++N + E+A L++
Sbjct: 663 F---RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLE 699
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 21/352 (5%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C G L A + + + MT + + SYN++++ CK G + LA E+L M
Sbjct: 349 CSRGGLWEAARNL--FDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM 406
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P+V +Y+T+IDG+A+ G +E+L L EM G+ + V YN++L + G EEA +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
L +M I D +Y L G + G E K+ ++ + ++ + + + L++ K
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
+ GL DV + +ID CK G A+ L + M K PN+
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG-LTTEMK 318
YNS I+ + A+ D + + + ++ + L N ++ + FG LTTE
Sbjct: 587 YNSIIDAFGRSATMDRSADYSNG--GSLPFSSSALSALTETEGN--RVIQLFGQLTTE-- 640
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEA--KELMKMMIMQGIRPDCITYTTLI 368
S NR T + C+ G E + E+ + M I+P+ +T++ ++
Sbjct: 641 ----SNNRTTKD------CEEGMQELSCILEVFRKMHQLEIKPNVVTFSAIL 682
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 178/362 (49%), Gaps = 18/362 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+ L G + G A V+K+M T + P+ SYN +++G CK G L A+ ++G M
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQM---TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G P TY L+ GY G ++ + L EM+ PN N +L+ L++ G +
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA ++L M +K D + I+ +GLC +G L +A+ +I+K + + +L L
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI----EIVKGMRVHGSAALGNL 503
Query: 194 LN-YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
N YI S+I PD+ T +T+++G CK G +A L+ M+
Sbjct: 504 GNSYI---------GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAF 311
QP+ YN FI+ CK A ++ ++ K+ + T+N+LI G QI E
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
GL EMK G+S N TYNT I LC+ E+A L+ M+ + I P+ ++ LI F
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Query: 372 NK 373
K
Sbjct: 675 CK 676
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 189/412 (45%), Gaps = 25/412 (6%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSV-WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 78
CK G + A ++ M L + PNS++YN ++ GFCK G L A+ + + +
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
S+++Y + G R G E+ + +M ++G+ P+I YN ++ L + G + +A
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
++ M +CPD +Y L G C G + A L ++++ + + +A++ NILL+ +
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM---------- 248
K M +G D T ++DG C G +KA+ + GM
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502
Query: 249 -------------IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTF 294
I+ + P+L Y++ +NGLCK AKNL E+ KL D+ +
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 295 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 354
N I + G+I AF + +M+ G + TYN+LI L E LM M
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 355 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+GI P+ TY T I + + E+ L D M+ K + P+ ++ ++ F
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 189/459 (41%), Gaps = 98/459 (21%)
Query: 43 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 102
+ P + ++N +I C + A E+ +M + G +P+ T+ L+ GY + G ++ L
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 103 RLCDEMVERGLFPNIVVYNSILYWLYRHG---DME------------------------- 134
L + M G+ PN V+YN+I+ R G D E
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL 262
Query: 135 -------EASKVLSDM-IDKHIC---PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
+AS++ SDM +D+++ P+ +Y ++ +G C+ G L +A L I + D
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
+ S NI L + + M +G+ P +Y+ ++DG CKLG A
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK------------------ 285
+ M + P+ Y ++G C + D AK+L+ E+ +
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 286 ------------RKL------LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA--- 324
RK+ LD T N ++ G SG++D+A + M+ G +A
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502
Query: 325 --------------------NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
+ +TY+TL+N LCK G EAK L M+ + ++PD + Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
I HF K+ + M KG +TY++++
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 157/335 (46%), Gaps = 10/335 (2%)
Query: 73 MVKAGF---EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
+V++ F +PSV Y L++ + +E L +MV G+ P +N ++ L
Sbjct: 100 LVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD 159
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
++ A ++ +M +K P+++++ IL G C+ G + L+L N + F ++ +
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
N +++ C+ M GL PD+ T + I CK G A R+++ M
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM- 278
Query: 250 KMDE-----QPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSN 303
++DE +PN YN + G CK+ + AK L + +R+ L ++N + G
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338
Query: 304 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
G+ EA + +M G+ + +YN L++ LCK G +AK ++ +M G+ PD +T
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 364 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
Y L+ + + +L M+ +P+ T
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 126/301 (41%), Gaps = 56/301 (18%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL+G CK G A + +M G + P+SV+YN I+ FCK+G + A VL DM
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEM---MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G S+ TY +LI G + E L DEM E+G+ PNI YN+ + +L +E
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCR------------------------------ 164
+A+ +L +M+ K+I P+ +S+ L E C+
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFN 706
Query: 165 ----NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 220
G L +A +L +L F L+ +CK MI RG
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 280
D VIDG K+GN ++A NSF + + +MAS N V
Sbjct: 767 DPAALMPVIDGLGKMGNKKEA-------------------NSFADKMMEMASVGEVANKV 807
Query: 281 D 281
D
Sbjct: 808 D 808
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 187/450 (41%), Gaps = 68/450 (15%)
Query: 1 MTLIGSGGCIKEW-VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 59
MT G G I + +L+DG CK G L A ++ LM N V P++V+Y +++G+C
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV---GLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 60 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 119
G + A+ +L +M++ P+ T L+ + G + E+ L +M E+G + V
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 120 YNSILYWLYRHGDMEEASKVLSDM-----------------------IDKHICPDQYSYA 156
N I+ L G++++A +++ M I+ + PD +Y+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 157 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 216
L GLC+ G EA L +++ L D+ + NI +++ CK M +
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ---PNLTIYNSFINGLCKMAST 273
G + T ++I G LG + ++ M +M E+ PN+ YN+ I LC+
Sbjct: 589 GCHKSLETYNSLILG---LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 274 DVAKNLVDELRKRKLL-DATTFNTLISGYSN----------------------------- 303
+ A NL+DE+ ++ + + +F LI +
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMF 705
Query: 304 -----SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 358
+GQ+ +A L + G Y L+ LCK E A ++ MI +G
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYG 765
Query: 359 PDCITYTTLITHFNKKHHPEEVIALHDYMI 388
D +I K + +E + D M+
Sbjct: 766 FDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 146/343 (42%), Gaps = 27/343 (7%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNL--------------------MTGNSVWPNSVSYNSI 53
+++DG C +G LD A++++K M + + N+ P+ ++Y+++
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530
Query: 54 INGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL 113
+NG CK G A+ + +M+ +P Y I + + G + + R+ +M ++G
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 114 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 173
++ YNS++ L + E ++ +M +K I P+ +Y + LC + +A
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 174 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGN 232
L +++++ ++ + FS L+ CK + ++ G +Y+ + +
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYS--LMFNEL 708
Query: 233 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDA 291
G KA L ++ + +Y + LCK +VA ++ ++ R D
Sbjct: 709 LAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDP 768
Query: 292 TTFNTLISGYSNSGQIDEAFGLT---TEMKSLGLSANRVTYNT 331
+I G G EA EM S+G AN+V N
Sbjct: 769 AALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNA 811
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEA 310
+ +P++ +YN + K + L ++ + T TFN LI +S +D A
Sbjct: 107 ENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAA 166
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
L EM G N T+ L+ CK G ++ EL+ M G+ P+ + Y T+++
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSS 226
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
F ++ ++ + + M +G++PD T+++ ++
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%)
Query: 294 FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI 353
+N L+ +++ L +M G++ T+N LI LC + C + A+EL M
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 354 MQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+G +P+ T+ L+ + K ++ + L + M GV+P++ Y+ IV+ F
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 199/398 (50%), Gaps = 8/398 (2%)
Query: 9 CIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 68
C K ++L CK G +D A +K +M + PN V YN+++ C+ + LA
Sbjct: 452 CNKIFLLF---CKQGKVDAATSFLK---MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS 505
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
+ +M++ G EP+ TY+ LIDG+ + + + + ++M N V+YN+I+ L
Sbjct: 506 IFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLC 565
Query: 129 RHGDMEEASKVLSDMI-DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 187
+ G +A ++L ++I +K SY + +G + G A++ + ++ + +
Sbjct: 566 KVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNV 625
Query: 188 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
+ L+N CKS M + L D+ +IDG CK + + A L++
Sbjct: 626 VTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSE 685
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQ 306
+ ++ PN+++YNS I+G + D A +L ++ + D T+ T+I G G
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
I+ A L +E+ LG+ + + + L+N L K G +A ++++ M + + P+ + Y+T
Sbjct: 746 INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYST 805
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+I +++ + E LHD M+ KG++ D ++ +V+
Sbjct: 806 VIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 195/428 (45%), Gaps = 40/428 (9%)
Query: 16 LDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 75
+ ACKT L +AL ++++M G V + +Y S+I F K+G + A V+ +MV
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLG--VPASQETYTSVIVAFVKEGNMEEAVRVMDEMVG 338
Query: 76 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
G SV +L++GY + L ++L L + M E GL P+ V+++ ++ W ++ +ME+
Sbjct: 339 FGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEK 398
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK--------------- 180
A + M I P + +G + AL++ N +
Sbjct: 399 AIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL 458
Query: 181 -------------FDLIED-------AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 220
++E F N++L + C+ M+ +GL P
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH-CRMKNMDLARSIFSEMLEKGLEP 517
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 280
+ +T + +IDG K + + A + N M + + N IYN+ INGLCK+ T AK ++
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 281 DEL--RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
L KR + T++N++I G+ G D A EM G S N VT+ +LIN CK
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCK 637
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
+ + A E+ M ++ D Y LI F KK+ + L + G++P+
Sbjct: 638 SNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSV 697
Query: 399 YDAIVTPF 406
Y+++++ F
Sbjct: 698 YNSLISGF 705
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 133/261 (50%), Gaps = 3/261 (1%)
Query: 6 SGGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 65
S C ++DG K G D A++ ++M + N PN V++ S+INGFCK + L
Sbjct: 587 SMSCTSYNSIIDGFVKVGDTDSAVETYREM---SENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A E+ +M + + Y LIDG+ + ++ + L E+ E GL PN+ VYNS++
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
G M+ A + M++ I D ++Y + +GL ++G + A L++++L ++
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D +L+N + K M + + P+V +TVI G+ + GN +A RL+
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLH 823
Query: 246 NGMIKMDEQPNLTIYNSFING 266
+ M++ + T++N ++G
Sbjct: 824 DEMLEKGIVHDDTVFNLLVSG 844
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 155/369 (42%), Gaps = 36/369 (9%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GFE + R + L++ Y R ++ ++ MV+R + P + N++L L R ++
Sbjct: 162 RFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLID 221
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA ++ + M+ + D + +L R EA+K+ +++ D ++ +
Sbjct: 222 EAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAV 281
Query: 195 NYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
CK+ M + G+P T +VI K GN E+A+R+ + M+
Sbjct: 282 QAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGI 341
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
++ S +NG CK A +L + + + L D F+ ++ + + ++++A
Sbjct: 342 PMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIE 401
Query: 313 LTTEMKSLGLSANRVTYNTLIN----------------------------------LLCK 338
MKS+ ++ + V +T+I L CK
Sbjct: 402 FYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCK 461
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
G + A +KMM +GI P+ + Y ++ + + + ++ M+ KG+ P+ T
Sbjct: 462 QGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFT 521
Query: 399 YDAIVTPFL 407
Y ++ F
Sbjct: 522 YSILIDGFF 530
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 163/390 (41%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL+ + +D A+ LM V P N++++ + + A+E+ MV
Sbjct: 175 LLNAYIRNKRMDYAVDCF---GLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G T L+ R EE++++ ++ RG P+ ++++ + + D+
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLV 291
Query: 135 EASKVLSDMIDKHICP-DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A +L +M K P Q +Y + + G + EA+++ ++++ F + + L
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N CK M GL PD + +++ CK EKA+ Y M +
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL 313
P+ + ++ I G K S + A + ++ + + N + + G++D A
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSF 471
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M+ G+ N V YN ++ C+ + A+ + M+ +G+ P+ TY+ LI F K
Sbjct: 472 LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFK 531
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + + M ++ Y+ I+
Sbjct: 532 NKDEQNAWDVINQMNASNFEANEVIYNTII 561
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 178/387 (45%), Gaps = 4/387 (1%)
Query: 18 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 77
G K+G AL+++ M TG S + + SII+ G L AE + ++ ++G
Sbjct: 278 GFAKSGDPSKALQLLG-MAQATGLSA--KTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 78 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 137
+P R Y L+ GY + G L+++ + EM +RG+ P+ Y+ ++ G E A
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 138 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 197
VL +M + P+ + ++ L G G + ++ ++ + D N++++
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Query: 198 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 257
K M++ G+ PD T T+ID +CK G A ++ M + P
Sbjct: 455 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 258 TIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTE 316
T YN IN D K L+ +++ + +L + T TL+ Y SG+ ++A E
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
MKS+GL + YN LIN + G E+A ++M G++P + +LI F +
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 634
Query: 377 PEEVIALHDYMILKGVIPDQKTYDAIV 403
E A+ YM GV PD TY ++
Sbjct: 635 DAEAFAVLQYMKENGVKPDVVTYTTLM 661
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 153/352 (43%), Gaps = 36/352 (10%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P + +YN+++ G+ K G L AE ++ +M K G P TY+ LID Y G E + +
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV 396
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI------- 157
EM + PN V++ +L G+ ++ +VL +M + PD+ Y +
Sbjct: 397 LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Query: 158 --------------LTEGL--------------CRNGYLTEALKLHNQILKFDLIEDAFS 189
L+EG+ C++G A ++ + + + A +
Sbjct: 457 FNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT 516
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
NI++N G M ++G+ P+V T T++D K G A+ M
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQID 308
+ +P+ T+YN+ IN + ++ A N + L + N+LI+ + +
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 360
EAF + MK G+ + VTY TL+ L + ++ + + MIM G +PD
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 152/359 (42%), Gaps = 3/359 (0%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES--LRLC 105
++YN++I + + A ++ M + G++ Y+ +I R ++ LRL
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
E+ L ++ + N I+ + GD +A ++L + + + L +
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G EA L ++ + + + N LL K+ M RG+ PD +T
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+ +ID G E A + M D QPN +++ + G ++ E++
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 286 RKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
+ D +N +I + +D A M S G+ +RVT+NTLI+ CK+G
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 345 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
A+E+ + M +G P TY +I + + +++ L M +G++P+ T+ +V
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 153/362 (42%), Gaps = 47/362 (12%)
Query: 85 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 144
Y+ LI R L E+ L + L P + YN+++ R+ D+E+A +++ M
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQKQT---LTP--LTYNALIGACARNNDIEKALNLIAKMR 224
Query: 145 DKHICPDQYSYAILTEGLCRNGYLTEA--LKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
D +Y+++ + L R+ + L+L+ +I + L D +N ++ KS
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
G GL T ++I G T +A L+ + + +P YN+
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 263 FINGLCKMASTDVAKNLVDELRKRK----------LLDAT-------------------- 292
+ G K A+++V E+ KR L+DA
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 293 ------TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
F+ L++G+ + G+ + F + EMKS+G+ +R YN +I+ K C + A
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA--LHDYMILKGVIPDQKTYDAIVT 404
M+ +GI PD +T+ TLI K H ++A + + M +G +P TY+ ++
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCK--HGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 405 PF 406
+
Sbjct: 523 SY 524
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 231 GNCKLGN-TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK--NLVDELRKRK 287
G C N EKAL L M + Q + Y+ I L + D L E+ + K
Sbjct: 205 GACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDK 264
Query: 288 L-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
L LD N +I G++ SG +A L ++ GLSA T ++I+ L +G EA+
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
L + + GI+P Y L+ + K ++ ++ M +GV PD+ TY ++ +
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 407 LLA 409
+ A
Sbjct: 385 VNA 387
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D K+G + A++ +++M + + P+S YN++IN + ++G A M
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSV---GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G +PS+ +LI+ + E+ + M E G+ P++V Y +++ L R +
Sbjct: 612 SDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQ 671
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 173
+ V +MI PD+ + ++L L Y+ + L+
Sbjct: 672 KVPVVYEEMIMSGCKPDRKARSMLRSAL---RYMKQTLR 707
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 186/391 (47%), Gaps = 7/391 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+D + +++ALK+ K++ ++P+ S++ + GL LA E + M
Sbjct: 206 ILIDCCIRERKVNMALKLTYKVDQF---GIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G + + I Y G ++ L M G+ P+IV + + L + G +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA+ VL + I D S + + +G C+ G EA+KL I F L + F +
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSF 379
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
L+ IC + + GL PD T+IDG C LG T+KA + + ++K
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
P+LT I + S A+++ ++ L LD T+N L+ GY + Q+++ F
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L EM+S G+S + TYN LI+ + G +EA E++ +I +G P + +T +I F+
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K+ +E L YM + PD T A++
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 171/385 (44%), Gaps = 7/385 (1%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C G D +++ M + P+ V++ I+ CK G L A VL + G
Sbjct: 282 CSDGYFDKGWELLMGMK---HYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGIS 338
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
+ +++IDG+ + G EE+++L R PNI VY+S L + GDM AS +
Sbjct: 339 QDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTI 395
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
++ + + PD Y + +G C G +A + +LK + IL+ +
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
+M T GL DV T ++ G K K L + M P++
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMK 318
YN I+ + D A ++ EL +R + +T F +I G+S G EAF L M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
L + + VT + L++ CK E+A L ++ G++PD + Y TLI + E
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 379 EVIALHDYMILKGVIPDQKTYDAIV 403
+ L M+ +G++P++ T+ A+V
Sbjct: 636 KACELIGLMVQRGMLPNESTHHALV 660
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 5/260 (1%)
Query: 9 CIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK-GGLLLAE 67
C+ ++DG C G D A + + L +GN P S++ ++I+ G C + G + AE
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGAL-LKSGN---PPSLTTSTILIGACSRFGSISDAE 463
Query: 68 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 127
V +M G + V TY L+ GY + L + L DEM G+ P++ YN +++ +
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 128 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 187
G ++EA++++S++I + P ++ + G + G EA L + + D
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 188 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
+ + LL+ CK+ ++ GL PDV T+I G C +G+ EKA L
Sbjct: 584 VTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGL 643
Query: 248 MIKMDEQPNLTIYNSFINGL 267
M++ PN + +++ + GL
Sbjct: 644 MVQRGMLPNESTHHALVLGL 663
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 144/319 (45%), Gaps = 7/319 (2%)
Query: 16 LDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 75
+DG CK G + A+K++ L PN Y+S ++ C G +L A + ++ +
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLR------PNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 76 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
G P Y T+IDGY G +++ + +++ G P++ ++ R G + +
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISD 461
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
A V +M + + D +Y L G + L + +L +++ + D + NIL++
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+ +I RG P VI G K G+ ++A L+ M + +P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLT 314
++ ++ ++G CK + A L ++L L D +NTLI GY + G I++A L
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 315 TEMKSLGLSANRVTYNTLI 333
M G+ N T++ L+
Sbjct: 642 GLMVQRGMLPNESTHHALV 660
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 156/359 (43%), Gaps = 39/359 (10%)
Query: 84 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 143
++ LID R + +L+L ++ + G+FP+ V S+L + R +E A + + M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 144 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 203
+ + + ++ C +GY + +L + + + D + + ++ +CK+
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 204 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 263
+ G+ D + ++VIDG CK+G E+A++L + +PN+ +Y+SF
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSF 379
Query: 264 INGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF----------- 311
++ +C A + E+ + LL D + T+I GY N G+ D+AF
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 312 --GLTTE----------------------MKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
LTT MK+ GL + VTYN L++ K + E
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 348 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
L+ M GI PD TY LI + + +E + +I +G +P + ++ F
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 186/391 (47%), Gaps = 7/391 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+D + +++ALK+ K++ ++P+ S++ + GL LA E + M
Sbjct: 206 ILIDCCIRERKVNMALKLTYKVDQF---GIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G + + I Y G ++ L M G+ P+IV + + L + G +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA+ VL + I D S + + +G C+ G EA+KL I F L + F +
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL---IHSFRLRPNIFVYSSF 379
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
L+ IC + + GL PD T+IDG C LG T+KA + + ++K
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
P+LT I + S A+++ ++ L LD T+N L+ GY + Q+++ F
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L EM+S G+S + TYN LI+ + G +EA E++ +I +G P + +T +I F+
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K+ +E L YM + PD T A++
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 171/385 (44%), Gaps = 7/385 (1%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C G D +++ M + P+ V++ I+ CK G L A VL + G
Sbjct: 282 CSDGYFDKGWELLMGMK---HYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGIS 338
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
+ +++IDG+ + G EE+++L R PNI VY+S L + GDM AS +
Sbjct: 339 QDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTI 395
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
++ + + PD Y + +G C G +A + +LK + IL+ +
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
+M T GL DV T ++ G K K L + M P++
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMK 318
YN I+ + D A ++ EL +R + +T F +I G+S G EAF L M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
L + + VT + L++ CK E+A L ++ G++PD + Y TLI + E
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 379 EVIALHDYMILKGVIPDQKTYDAIV 403
+ L M+ +G++P++ T+ A+V
Sbjct: 636 KACELIGLMVQRGMLPNESTHHALV 660
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 5/260 (1%)
Query: 9 CIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK-GGLLLAE 67
C+ ++DG C G D A + + L +GN P S++ ++I+ G C + G + AE
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGAL-LKSGN---PPSLTTSTILIGACSRFGSISDAE 463
Query: 68 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 127
V +M G + V TY L+ GY + L + L DEM G+ P++ YN +++ +
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 128 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 187
G ++EA++++S++I + P ++ + G + G EA L + + D
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 188 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
+ + LL+ CK+ ++ GL PDV T+I G C +G+ EKA L
Sbjct: 584 VTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGL 643
Query: 248 MIKMDEQPNLTIYNSFINGL 267
M++ PN + +++ + GL
Sbjct: 644 MVQRGMLPNESTHHALVLGL 663
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 144/319 (45%), Gaps = 7/319 (2%)
Query: 16 LDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 75
+DG CK G + A+K++ L PN Y+S ++ C G +L A + ++ +
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFRLR------PNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 76 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
G P Y T+IDGY G +++ + +++ G P++ ++ R G + +
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISD 461
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
A V +M + + D +Y L G + L + +L +++ + D + NIL++
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+ +I RG P VI G K G+ ++A L+ M + +P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLT 314
++ ++ ++G CK + A L ++L L D +NTLI GY + G I++A L
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 315 TEMKSLGLSANRVTYNTLI 333
M G+ N T++ L+
Sbjct: 642 GLMVQRGMLPNESTHHALV 660
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 156/359 (43%), Gaps = 39/359 (10%)
Query: 84 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 143
++ LID R + +L+L ++ + G+FP+ V S+L + R +E A + + M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 144 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 203
+ + + ++ C +GY + +L + + + D + + ++ +CK+
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 204 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 263
+ G+ D + ++VIDG CK+G E+A++L + +PN+ +Y+SF
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSF 379
Query: 264 INGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF----------- 311
++ +C A + E+ + LL D + T+I GY N G+ D+AF
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 312 --GLTTE----------------------MKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
LTT MK+ GL + VTYN L++ K + E
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 348 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
L+ M GI PD TY LI + + +E + +I +G +P + ++ F
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 192/399 (48%), Gaps = 12/399 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMN---LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 70
+L++ CK+ +D AL+V +KM GN + +S+ +N++I+G CK G L AEE+L
Sbjct: 334 ILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 71 GDM-VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
M ++ P+ TY LIDGY R G LE + + M E + PN+V N+I+ + R
Sbjct: 394 VRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
H + A DM + + + +Y L C + +A+ + ++L+ DA
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
L++ +C+ + G D+ +I C NTEK + M
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
K ++P+ YN+ I+ K + + +++++R+ L TT+ +I Y + G++D
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 309 EAFGLTTEMKSLGLSA----NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
EA L K +GL + N V YN LIN K G +A L + M M+ +RP+ TY
Sbjct: 634 EALKL---FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
L N+K E ++ L D M+ + P+Q T + ++
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 174/395 (44%), Gaps = 14/395 (3%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G L K++ ++ + + V PNSV I+ CK A ++L D++K
Sbjct: 235 GRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEA 294
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+ L+ R + L +M E + P++V ++ L + ++EA +V
Sbjct: 295 PPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEK 354
Query: 143 MIDKH------ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE----DAFSLNI 192
M K I D + L +GLC+ G L EA +L +++ L E +A + N
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL---LVRMKLEERCAPNAVTYNC 411
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L++ C++ M + P+V T T++ G C+ A+ + M K
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
+ N+ Y + I+ C +++ + A +++ + DA + LISG + +A
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+ ++K G S + + YN LI L C E+ E++ M +G +PD ITY TLI+ F
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
K E V + + M G+ P TY A++ +
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 166/379 (43%), Gaps = 24/379 (6%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMV-KAGFEPSVRTYATLIDGYARWGSL---EES 101
NS N +++ + G + A +VL +M+ K P R A ++ G L E+
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKI 243
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
+ L G+ PN V + L ++ A +LSD++ + + L
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 162 LCRNGYLTEALKLHNQILKFDLIE---DAFSLNILLNYICKSXXXXXXXXXXGSMITRG- 217
L RN ++ ++++ +LK D ++ D +L IL+N +CKS M RG
Sbjct: 304 LGRNMDIS---RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM--RGK 358
Query: 218 -------LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ--PNLTIYNSFINGLC 268
+ D T+IDG CK+G ++A L M K++E+ PN YN I+G C
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM-KLEERCAPNAVTYNCLIDGYC 417
Query: 269 KMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 327
+ + AK +V +++ ++ + T NT++ G ++ A +M+ G+ N V
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 328 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
TY TLI+ C E+A + M+ G PD Y LI+ + + I + + +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 388 ILKGVIPDQKTYDAIVTPF 406
G D Y+ ++ F
Sbjct: 538 KEGGFSLDLLAYNMLIGLF 556
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 195/447 (43%), Gaps = 61/447 (13%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL------LAEE 68
L+ C +G A K++KKM + G+ P V YN +I C L LAE+
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKM-VKCGH--MPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
+M+ AG + ++ G E++ + EM+ +G P+ Y+ +L +L
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
ME A + +M + D Y+Y I+ + C+ G + +A K N++ + +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ L++ K+ +M++ G P++ T + +IDG+CK G EKA +++ M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 249 --------IKM--------DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDA 291
+ M E+PN+ Y + ++G CK + A+ L+D + +
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Query: 292 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL---------------- 335
++ LI G G++DEA + TEM G A TY++LI+
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 336 -------------------LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
LCK G +EA +LM+MM +G +P+ +TYT +I F
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 377 PEEVIALHDYMILKGVIPDQKTYDAIV 403
E + L + M KGV P+ TY ++
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLI 821
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 178/418 (42%), Gaps = 57/418 (13%)
Query: 6 SGGCIKEWV----LLDGACKTGSLDLALKVMKKM-------------NLMTGNSVWPNSV 48
S GC+ V L+DG CK G ++ A ++ ++M NS PN V
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
+Y ++++GFCK + A ++L M G EP+ Y LIDG + G L+E+ + EM
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 109 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 168
E G + Y+S++ ++ + ASKVLS M++ P+ Y + +GLC+ G
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 169 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
EA KL M +G P+V T +
Sbjct: 761 DEAYKLMQM-----------------------------------MEEKGCQPNVVTYTAM 785
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
IDG +G E L L M PN Y I+ CK + DVA NL++E+++
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845
Query: 289 LDATT-FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
T + +I G++ + E+ GL E+ + Y LI+ L K E A
Sbjct: 846 PTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALR 903
Query: 348 LM-KMMIMQGIRPD-CITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
L+ ++ D TY +LI + E L M KGVIP+ +++ +++
Sbjct: 904 LLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 176/407 (43%), Gaps = 29/407 (7%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
CK G AL +++ N + P++V Y +I+G C+ A + L M
Sbjct: 281 CKVGKWREALTLVETENFV------PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 334
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P+V TY+TL+ G L R+ + M+ G +P+ ++NS+++ GD A K+
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRN------GYLTEALKLHNQILKFDLIEDAFSLNIL 193
L M+ P Y IL +C + L A K ++++L ++ + +++
Sbjct: 395 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+C + MI +G PD T + V++ C E A L+ M +
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 514
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
++ Y ++ CK + A+ +E+R+ + T+ LI Y + ++ A
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ----------------G 356
L M S G N VTY+ LI+ CK G E+A ++ + M
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 357 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
RP+ +TY L+ F K H EE L D M ++G P+Q YDA++
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 145/366 (39%), Gaps = 10/366 (2%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
N ++ C+ G +A E LG + F PS TY LI + + L+ + + EM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
L + Y L + G EA L+ + ++ PD Y L GLC E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 230
A+ N++ + + + + LL M+ G P +++
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 231 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST------DVAKNLVDE-L 283
C G+ A +L M+K P +YN I +C + D+A+ E L
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 284 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+L+ ++ ++G+ ++AF + EM G + TY+ ++N LC E
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
A L + M G+ D TYT ++ F K E+ + M G P+ TY A++
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Query: 404 TPFLLA 409
+L A
Sbjct: 561 HAYLKA 566
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 204/457 (44%), Gaps = 77/457 (16%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
K G +D A+K++ +M N P+ + NS+IN K + A ++ M + +P
Sbjct: 515 KVGEIDEAIKLLSEM---MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
+V TY TL+ G + G ++E++ L + MV++G PN + +N++ L ++ ++ A K+L
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ------------------ILKFD 182
M+D PD ++Y + GL +NG + EA+ +Q ++K
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAS 691
Query: 183 LIEDAFSLNILLNYICKSXXXXXX-XXXXGSMITR-GLPPDV-YTKATVIDG-------- 231
LIEDA+ + Y C GS++ G+ V +++ V +G
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 751
Query: 232 -------NCKLGNTEKALRLYNGMIK-MDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
+CK N A L+ K + QP L YN I GL + ++A+++ ++
Sbjct: 752 LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 811
Query: 284 RKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN------------ 330
+ + D T+N L+ Y SG+IDE F L EM + AN +T+N
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 331 ------------------------TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
LI+ L K+G EAK+L + M+ G RP+C Y
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
LI F K + AL M+ +GV PD KTY +V
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 181/384 (47%), Gaps = 4/384 (1%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+ G ++ A +++K+M+ P+ V+Y +I+ C L A+EV M +P
Sbjct: 270 RAGKINEAYEILKRMD---DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
TY TL+D ++ L+ + EM + G P++V + ++ L + G+ EA L
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
M D+ I P+ ++Y L GL R L +AL+L + + A++ + ++Y KS
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M T+G+ P++ + K G +A +++ G+ + P+ Y
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
N + K+ D A L+ E+ + D N+LI+ + ++DEA+ + MK
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
+ L VTYNTL+ L KNG +EA EL + M+ +G P+ IT+ TL K
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 380 VIALHDYMILKGVIPDQKTYDAIV 403
+ + M+ G +PD TY+ I+
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTII 650
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 185/386 (47%), Gaps = 11/386 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+D C LD A +V +KM TG P+ V+Y ++++ F L ++ +M
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMK--TGRH-KPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G P V T+ L+D + G+ E+ D M ++G+ PN+ YN+++ L R +
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++A ++ +M + P Y+Y + + ++G AL+ ++ + + + N
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
L + K+ + GL PD T ++ K+G ++A++L + M++
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD-ATTFNTLISGYSNSGQIDEAFG 312
+P++ + NS IN L K D A + +++ KL T+NTL++G +G+I EA
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDE---EAKELMKMMIMQGIRPDCITYTTLIT 369
L M G N +T+NTL + LCKN DE K L KMM M G PD TY T+I
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKN--DEVTLALKMLFKMMDM-GCVPDVFTYNTIIF 651
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPD 395
K +E + M K V PD
Sbjct: 652 GLVKNGQVKEAMCFFHQM-KKLVYPD 676
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 167/352 (47%), Gaps = 5/352 (1%)
Query: 19 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 78
+CK ++ A + +K G V P +YN +I G + + +A++V + G
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLG--VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
P V TY L+D Y + G ++E L EM N + +N ++ L + G++++A
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 139 VLSD-MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 197
+ D M D+ P +Y L +GL ++G L EA +L +L + + NIL+N
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 198 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 257
K+ M+ G+ PD+ T + ++D C +G ++ L + + + P++
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 258 TIYNSFINGLCKMASTDVAKNLVDELRKRKLL--DATTFNTLISGYSNSGQIDEAFGLTT 315
YN INGL K + A L +E++ + + D T+N+LI +G ++EA +
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
E++ GL N T+N LI +G E A + + M+ G P+ TY L
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 157/351 (44%), Gaps = 1/351 (0%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N+ SYN +I+ K A EV M+ GF PS++TY++L+ G + ++ + L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
EM GL PN+ + + L R G + EA ++L M D+ PD +Y +L + LC
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
L A ++ ++ D + LL+ + M G PDV T
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
++D CK GN +A + M PNL YN+ I GL ++ D A L +
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 286 RKLLD-ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
+ A T+ I Y SG A +MK+ G++ N V N + L K G D E
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 345 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
AK++ + G+ PD +TY ++ ++K +E I L M+ G PD
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 179/412 (43%), Gaps = 41/412 (9%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
A++V ++M L P+ +Y+S++ G K+ + +L +M G +P+V T+
Sbjct: 207 AMEVYRRMIL---EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI 263
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY------------------R 129
I R G + E+ + M + G P++V Y ++ L R
Sbjct: 264 CIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 130 HG-----------------DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 172
H D++ + S+M PD ++ IL + LC+ G EA
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 173 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 232
+ + ++ + + N L+ + + G+M + G+ P YT ID
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 233 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DA 291
K G++ AL + M PN+ N+ + L K AK + L+ L+ D+
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 292 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK-NGCDEEAKELMK 350
T+N ++ YS G+IDEA L +EM G + + N+LIN L K + DE K M+
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 351 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
M M+ ++P +TY TL+ K +E I L + M+ KG P+ T++ +
Sbjct: 564 MKEMK-LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 43/337 (12%)
Query: 4 IGSGGCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 59
+ S GCI + LLD K+G +D ++ K+M + + N++++N +I+G K
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM---STHECEANTITHNIVISGLVK 867
Query: 60 KGGLLLAEEVLGD-MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 118
G + A ++ D M F P+ TY LIDG ++ G L E+ +L + M++ G PN
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
+YN ++ + G+ + A + M+ + + PD +Y++L + LC G + E L ++
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 179 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT-RGLPPDVYTKATVIDGNCKLGN 237
+ L D N+++N + KS M T RG+ PD+YT ++I G
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 238 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTL 297
E+A ++YN + + +PN+ TFN L
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVF----------------------------------TFNAL 1073
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
I GYS SG+ + A+ + M + G S N TY L N
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 185/408 (45%), Gaps = 30/408 (7%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V +D K+G AL+ +KM + PN V+ N+ + K G A+++ +
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKT---KGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G P TY ++ Y++ G ++E+++L EM+E G P+++V NS++ LY+ +
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA K+ M + + P +Y L GL +NG + EA++L +++ + + N L
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +CK+ M+ G PDV+T T+I G K G ++A+ ++ M K+
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-- 672
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNT-----------LISGYS 302
+Y F+ LC + V +L+++ K++ +N LI
Sbjct: 673 -----VYPDFVT-LCTLLPGVVKASLIED--AYKIITNFLYNCADQPANLFWEDLIGSIL 724
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVT-YNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPD 360
ID A + + + G+ + + +I CK+ A+ L + G++P
Sbjct: 725 AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784
Query: 361 CITYTTLITHFNKKHHPEEVIALHDYMILK--GVIPDQKTYDAIVTPF 406
TY LI + E IA ++ +K G IPD TY+ ++ +
Sbjct: 785 LPTYNLLIGGLLEADMIE--IAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 179/435 (41%), Gaps = 43/435 (9%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+D CK G+ A + ++M + PN +YN++I G + L A E+ G+M
Sbjct: 368 ILVDALCKAGNFGEAFDTL---DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG-- 131
G +P+ TY ID Y + G +L ++M +G+ PNIV N+ LY L + G
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 132 ---------------------------------DMEEASKVLSDMIDKHICPDQYSYAIL 158
+++EA K+LS+M++ PD L
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
L + + EA K+ ++ + L + N LL + K+ M+ +G
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
PP+ T T+ D CK AL++ M+ M P++ YN+ I GL K A
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664
Query: 279 LVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM--KSLGLSANRVTYNTLINLL 336
+++K D T TL+ G + I++A+ + T AN + + ++L
Sbjct: 665 FFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSIL 724
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH--PEEVIALHDYMILKGVIP 394
+ G D A + ++ GI D + I ++ KH+ + GV P
Sbjct: 725 AEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 783
Query: 395 DQKTYDAIVTPFLLA 409
TY+ ++ L A
Sbjct: 784 KLPTYNLLIGGLLEA 798
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 186/465 (40%), Gaps = 80/465 (17%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL G K G + A+++ + M PN++++N++ + CK + LA ++L M+
Sbjct: 579 LLAGLGKNGKIQEAIELFEGM---VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER---------GLFPNIV------- 118
G P V TY T+I G + G ++E++ +M + L P +V
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIED 695
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPD------QYSYAILTEGLCRNG--YLTE 170
Y I +LY D + A+ D+I + +S ++ G+CR+G L
Sbjct: 696 AYKIITNFLYNCAD-QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754
Query: 171 ALKL---HNQI------------------------------LKFDLIE------------ 185
++ HN + L+ D+IE
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 186 ----DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 241
D + N LL+ KS M T + T VI G K GN + A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 242 LRLY-NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLIS 299
L LY + M D P Y I+GL K AK L + + + +N LI+
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 300 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
G+ +G+ D A L M G+ + TY+ L++ LC G +E K + G+ P
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 360 DCITYTTLITHFNKKHHPEEVIALHDYM-ILKGVIPDQKTYDAIV 403
D + Y +I K H EE + L + M +G+ PD TY++++
Sbjct: 995 DVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 163/370 (44%), Gaps = 1/370 (0%)
Query: 35 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 94
+LM + ++ +Y +I KGGL A L M + GF + +Y LI +
Sbjct: 141 FDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLK 200
Query: 95 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 154
E++ + M+ G P++ Y+S++ L + D++ +L +M + P+ Y+
Sbjct: 201 SRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT 260
Query: 155 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
+ I L R G + EA ++ ++ D + +L++ +C + M
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
T PD T T++D + + + ++ M K P++ + ++ LCK +
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 275 VAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 333
A + +D +R + +L + T+NTLI G ++D+A L M+SLG+ TY I
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 334 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 393
+ K+G A E + M +GI P+ + + K E + + G++
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 394 PDQKTYDAIV 403
PD TY+ ++
Sbjct: 501 PDSVTYNMMM 510
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 140/339 (41%), Gaps = 2/339 (0%)
Query: 71 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSILYWLYR 129
G M++ +P + + + G + + S + L N +L L
Sbjct: 71 GSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRV 130
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
G +EE + V M + I D +Y + + L G L +A ++ +F + +A+S
Sbjct: 131 DGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYS 190
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
N L++ + KS MI G P + T ++++ G K + + + L M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
+ +PN+ + I L + + A ++ + D T+ LI + ++D
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
A + +MK+ +RVTY TL++ N + K+ M G PD +T+T L+
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
K + E D M +G++P+ TY+ ++ L
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 159/330 (48%), Gaps = 1/330 (0%)
Query: 77 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 136
G P++ T L+ + +E + ++ DE+ GL PN+V Y +IL GDME A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 137 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 196
+VL +M+D+ PD +Y +L +G C+ G +EA + + + K ++ + + +++
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 197 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 256
+CK M+ R PD VID C+ ++A L+ M+K + P+
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 257 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTE 316
+ ++ I+ LCK A+ L DE K + T+NTLI+G G++ EA L +
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
M N TYN LI L KNG +E +++ M+ G P+ T+ L K
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Query: 377 PEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
E+ + + ++ G + D+++++ + F
Sbjct: 486 EEDAMKIVSMAVMNGKV-DKESWELFLKKF 514
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 158/315 (50%), Gaps = 2/315 (0%)
Query: 43 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 102
+ PN + N ++ CKK + A +VL ++ G P++ TY T++ GY G +E +
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 103 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
R+ +EM++RG +P+ Y ++ + G EA+ V+ DM I P++ +Y ++ L
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
C+ EA + +++L+ + D+ +++ +C+ M+ PD
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
+T+I CK G +A +L++ K P+L YN+ I G+C+ A L D+
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 283 LRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
+ +RK +A T+N LI G S +G + E + EM +G N+ T+ L L K G
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Query: 342 DEEAKELMKMMIMQG 356
+E+A +++ M +M G
Sbjct: 486 EEDAMKIVSMAVMNG 500
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 4/231 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+DG CK G A VM M N + PN V+Y +I CK+ A + +M
Sbjct: 266 VLMDGYCKLGRFSEAATVMDDME---KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++ F P +ID ++E+ L +M++ P+ + +++++WL + G +
Sbjct: 323 LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRV 382
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA K L D +K P +Y L G+C G LTEA +L + + + +AF+ N+L
Sbjct: 383 TEARK-LFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 244
+ + K+ M+ G P+ T + +G KLG E A+++
Sbjct: 442 IEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 159/404 (39%), Gaps = 48/404 (11%)
Query: 44 WPNSVSYNSIINGFCKKGGLLLAEEVL--GDMVKAGFEPSVRTYATLIDGYARWGSLEES 101
WP + +++ ++ + LA ++ GF + TY +++ +R + +
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPV 102
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRH----GDMEEASKVLSDMIDKHICPDQYSYAI 157
L ++ R +P I ++ L R+ G E + ++ + D + S
Sbjct: 103 ESLMADL--RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNT 160
Query: 158 LTEGLCRNGY--LTEALKLHNQILKFDLIEDAFSLNILLNYICKSX-------------- 201
L L +N L A+ N F + + F+ N+L+ +CK
Sbjct: 161 LLNVLIQNQRFDLVHAM-FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPS 219
Query: 202 ---------------------XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 240
M+ RG PD T ++DG CKLG +
Sbjct: 220 MGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSE 279
Query: 241 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLIS 299
A + + M K + +PN Y I LCK + A+N+ DE+ +R + D++ +I
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 300 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
++DEA GL +M + +TLI+ LCK G EA++L +G P
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD-EFEKGSIP 398
Query: 360 DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+TY TLI +K E L D M + P+ TY+ ++
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLI 442
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 183/386 (47%), Gaps = 6/386 (1%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+ G L ALKV+ LM V PN + N+ I+ F + L A L M G P
Sbjct: 254 RAGQLRDALKVL---TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVP 310
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
+V TY +I GY +EE++ L ++M +G P+ V Y +I+ +L + + E ++
Sbjct: 311 NVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 370
Query: 141 SDMIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
M +H + PDQ +Y L L ++ + EAL + D + +++ +CK
Sbjct: 371 KKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCK 430
Query: 200 SXXXXXXXXXXGSMITRG-LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
M+++G PPDV T V++G C+LG +KA +L M +PN
Sbjct: 431 EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTV 490
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEM 317
Y + +NG+C+ + A+ +++ + ++ T++ ++ G G++ EA + EM
Sbjct: 491 SYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREM 550
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 377
G V N L+ LC++G EA++ M+ + +G + + +TT+I F +
Sbjct: 551 VLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDEL 610
Query: 378 EEVIALHDYMILKGVIPDQKTYDAIV 403
+ +++ D M L D TY +V
Sbjct: 611 DAALSVLDDMYLINKHADVFTYTTLV 636
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 188/411 (45%), Gaps = 41/411 (9%)
Query: 16 LDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 75
+D + L+ AL+ +++M ++ + PN V+YN +I G+C + A E+L DM
Sbjct: 284 IDVFVRANRLEKALRFLERMQVV---GIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS 340
Query: 76 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV-ERGLFPNIVVYNSILYWLYRHGDME 134
G P +Y T++ + + E L +M E GL P+ V YN++++ L +H +
Sbjct: 341 KGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHAD 400
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL-KFDLIEDAFSLNIL 193
EA L D +K D+ Y+ + LC+ G ++EA L N++L K D + +
Sbjct: 401 EALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 460
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N C+ M T G P+ + +++G C+ G + +A + N +
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 520
Query: 254 QPNLTIYNSFINGL-----------------------------------CKMASTDVAKN 278
PN Y+ ++GL C+ T A+
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 279 LVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
++E L K ++ F T+I G+ + ++D A + +M + A+ TY TL++ L
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 388
K G EA ELMK M+ +GI P +TY T+I + + ++++A+ + MI
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 166/359 (46%), Gaps = 10/359 (2%)
Query: 3 LIGSGGCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFC 58
++ G C + V +++G C+ G +D A K+++ +M + PN+VSY +++NG C
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ---VMHTHGHKPNTVSYTALLNGMC 500
Query: 59 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 118
+ G L A E++ + + P+ TY+ ++ G R G L E+ + EMV +G FP V
Sbjct: 501 RTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 560
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
N +L L R G EA K + + ++K + ++ + G C+N L AL + + +
Sbjct: 561 EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Query: 179 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 238
+ D F+ L++ + K M+ +G+ P T TVI C++G
Sbjct: 621 YLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKV 680
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNTL 297
+ + + MI Q TIYN I LC + + A L+ + LR DA T L
Sbjct: 681 DDLVAILEKMI--SRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYAL 738
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
+ GY G A+ + M + L + L L G +EA +LM ++ +G
Sbjct: 739 MEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 161/360 (44%), Gaps = 36/360 (10%)
Query: 37 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 96
LM ++ +++ ++ + + G L A +VL M +AG EP++ T ID + R
Sbjct: 232 LMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRAN 291
Query: 97 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 156
LE++LR + M G+ PN+V YN ++ +EEA ++L DM K PD+ SY
Sbjct: 292 RLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYY 351
Query: 157 ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 216
+ LC+ + E L ++ K
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAK----------------------------------EH 377
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
GL PD T T+I K + ++AL + + + Y++ ++ LCK A
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEA 437
Query: 277 KNLVDELRKRKLL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
K+L++E+ + D T+ +++G+ G++D+A L M + G N V+Y L+N
Sbjct: 438 KDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
+C+ G EA+E+M M P+ ITY+ ++ ++ E + M+LKG P
Sbjct: 498 GMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 557
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 176/367 (47%), Gaps = 8/367 (2%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF-EPSVRTYATLIDGYARWGSLEESLRL 104
+ + Y++I++ CK+G + A++++ +M+ G P V TY +++G+ R G ++++ +L
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI-CPDQYSYAILTEGLC 163
M G PN V Y ++L + R G EA +++ +M ++H P+ +Y+++ GL
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM-NMSEEHWWSPNSITYSVIMHGLR 535
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 223
R G L+EA + +++ +N+LL +C+ + +G +V
Sbjct: 536 REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVV 595
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
TVI G C+ + AL + + M +++ ++ Y + ++ L K A L+ ++
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKM 655
Query: 284 RKRKLLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
K +D T T+ T+I Y G++D+ + +M + R YN +I LC G
Sbjct: 656 -LHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM--ISRQKCRTIYNQVIEKLCVLGK 712
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 401
EEA L+ ++ R D T L+ + KK P + M + +IPD K +
Sbjct: 713 LEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEK 772
Query: 402 IVTPFLL 408
+ +L
Sbjct: 773 LSKRLVL 779
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEM 317
+Y S + L K ++ ++ +++R + F+ ++ YS +GQ+ +A + T M
Sbjct: 209 VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLM 268
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 377
+ G+ N + NT I++ + E+A ++ M + GI P+ +TY +I + H
Sbjct: 269 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRV 328
Query: 378 EEVIALHDYMILKGVIPDQKTYDAIV 403
EE I L + M KG +PD+ +Y I+
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIM 354
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 183/394 (46%), Gaps = 5/394 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VLL+ K D K+ KKM + V N YN +++ K G AE++L +M
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKL---GVVANIHVYNVLVHACSKSGDPEKAEKLLSEM 229
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G P + TY TLI Y + E+L + D M G+ PNIV YNS ++ R G M
Sbjct: 230 EEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRM 289
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA+++ ++ D + + +Y L +G CR + EAL+L + + N +
Sbjct: 290 REATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSI 348
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
L +C+ M + + PD T T+I+ CK+ + A+++ MI+
Sbjct: 349 LRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL 408
Query: 254 QPNLTIYNSFINGLCKMASTDVAK-NLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG 312
+ ++ Y + I+G CK+ + AK L + K T++ L+ G+ N + DE
Sbjct: 409 KLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITK 468
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L E + GL A+ Y LI +CK + AK L + M +G+ D + +TT+ +
Sbjct: 469 LLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYW 528
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ E AL D M + ++ + K Y +I +
Sbjct: 529 RTGKVTEASALFDVMYNRRLMVNLKLYKSISASY 562
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 179/375 (47%), Gaps = 12/375 (3%)
Query: 36 NLMTGNSVWPNSVSY-NSIINGFCKKGGLLLAEEVLGDMVKA-GFEPSVRTYATLIDGYA 93
+L+ G S P VS+ S + + K G++ V+ + +++ G +P ++ L++
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179
Query: 94 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 153
+ + ++ +MV+ G+ NI VYN +++ + GD E+A K+LS+M +K + PD +
Sbjct: 180 KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239
Query: 154 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 213
+Y L C+ EAL + +++ + + + + N ++ + +
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSRE-----GRMREATR 294
Query: 214 ITRGLPPDV----YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
+ R + DV T T+IDG C++ + ++ALRL M P + YNS + LC+
Sbjct: 295 LFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCE 354
Query: 270 MASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 328
A L+ E+ +K+ D T NTLI+ Y + A + +M GL + +
Sbjct: 355 DGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYS 414
Query: 329 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 388
Y LI+ CK E AKE + MI +G P TY+ L+ F ++ +E+ L +
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFE 474
Query: 389 LKGVIPDQKTYDAIV 403
+G+ D Y ++
Sbjct: 475 KRGLCADVALYRGLI 489
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%)
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
V++ ++ + + G + ++ V + + P + +L L + K+ ++
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 179 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 238
+K ++ + N+L++ KS M +G+ PD++T T+I CK
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 298
+AL + + M + PN+ YNSFI+G + A L E++ + T+ TLI
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLI 314
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 358
GY IDEA L M+S G S VTYN+++ LC++G EA L+ M + I
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 359 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
PD IT TLI + K + + MI G+ D +Y A++ F
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGF 422
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 191/399 (47%), Gaps = 12/399 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMN---LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 70
+L++ CK+ +D AL+V ++M GN + +S+ +N++I+G CK G L AEE+L
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 71 GDM-VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
M ++ P+ TY LIDGY R G LE + + M E + PN+V N+I+ + R
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
H + A DM + + + +Y L C + +A+ + ++L+ DA
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
L++ +C+ + G D+ +I C N EK + M
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
K ++P+ YN+ I+ K + + +++++R+ L TT+ +I Y + G++D
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 309 EAFGLTTEMKSLGLSA----NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
EA L K +GL + N V YN LIN K G +A L + M M+ +RP+ TY
Sbjct: 634 EALKL---FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
L N+K E ++ L D M+ + P+Q T + ++
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 170/375 (45%), Gaps = 7/375 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG CK G L A +++ +M L PN+V+YN +I+G+C+ G L A+EV+ M
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKL--EERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ +P+V T T++ G R L ++ +M + G+ N+V Y ++++ ++E
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A M++ PD Y L GLC+ +A+++ ++ + D + N+L+
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI 553
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
C M G PD T T+I K + E R+ M +
Sbjct: 554 GLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLD 613
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT--FNTLISGYSNSGQIDEAFG 312
P +T Y + I+ C + D A L ++ ++ T +N LI+ +S G +A
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L EMK + N TYN L L + E +LM M+ Q P+ IT L+ +
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Query: 373 KKHHPEEVIALHDYM 387
+E++ L +M
Sbjct: 734 GS---DELVKLRKFM 745
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 172/385 (44%), Gaps = 8/385 (2%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
K++ ++ + + V PNSV I+ CK A ++L D++K + L+
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH-- 147
R + L +M E + P++V ++ L + ++EA +V M K
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD 361
Query: 148 ----ICPDQYSYAILTEGLCRNGYLTEALKLHNQI-LKFDLIEDAFSLNILLNYICKSXX 202
I D + L +GLC+ G L EA +L ++ L+ + +A + N L++ C++
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGK 421
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
M + P+V T T++ G C+ A+ + M K + N+ Y +
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
I+ C +++ + A +++ + DA + LISG + +A + ++K G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
S + + YN LI L C E+ E++ M +G +PD ITY TLI+ F K E V
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 382 ALHDYMILKGVIPDQKTYDAIVTPF 406
+ + M G+ P TY A++ +
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAY 626
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 166/379 (43%), Gaps = 24/379 (6%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMV-KAGFEPSVRTYATLIDGYA---RWGSLEES 101
NS N +++ + G + A +VL +M+ K P R A ++ R + E+
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKI 243
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
+ L G+ PN V + L ++ A +LSD++ + + L
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 162 LCRNGYLTEALKLHNQILKFDLIE---DAFSLNILLNYICKSXXXXXXXXXXGSMITRG- 217
L RN ++ ++++ +LK D ++ D +L IL+N +CKS M RG
Sbjct: 304 LGRNMDIS---RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGK 358
Query: 218 -------LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ--PNLTIYNSFINGLC 268
+ D T+IDG CK+G ++A L M K++E+ PN YN I+G C
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM-KLEERCVPNAVTYNCLIDGYC 417
Query: 269 KMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 327
+ + AK +V +++ ++ + T NT++ G ++ A +M+ G+ N V
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 328 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
TY TLI+ C E+A + M+ G PD Y LI+ + + I + + +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 388 ILKGVIPDQKTYDAIVTPF 406
G D Y+ ++ F
Sbjct: 538 KEGGFSLDLLAYNMLIGLF 556
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 186/394 (47%), Gaps = 52/394 (13%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G CK G +LAL + + + + PN V+Y ++++ C+ G + +++ +
Sbjct: 177 VISGFCKIGKPELALGFFE--SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
GFE Y+ I GY + G+L ++L EMVE+G+ ++V Y+ ++ L + G++E
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA +L MI + + P+ +Y + GLC+ G L EA L N+IL + D F L+
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ IC+ G M RG+ P + T TVI+G C G +A + G++
Sbjct: 355 DGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV----- 409
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-------------------------- 288
++ Y++ ++ K+ + D V E+R+R L
Sbjct: 410 GDVITYSTLLDSYIKVQNIDA----VLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGE 465
Query: 289 --------------LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
D T+ T+I GY +GQI+EA + E++ +SA V YN +I+
Sbjct: 466 ADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIID 524
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
LCK G + A E++ + +G+ D T TL+
Sbjct: 525 ALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLL 558
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 196/427 (45%), Gaps = 44/427 (10%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+DG C+ G+L+ A ++ M + P+ ++YN++ING C G + A+EV
Sbjct: 353 LIDGICRKGNLNRAFSMLGDME---QRGIQPSILTYNTVINGLCMAGRVSEADEV----- 404
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G V TY+TL+D Y + +++ L + +E + ++V+ N +L G
Sbjct: 405 SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYG 464
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA + M + + PD +YA + +G C+ G + EAL++ N++ K + A N ++
Sbjct: 465 EADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSS-VSAAVCYNRII 523
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK + +GL D++T T++ G + L L G+ +++
Sbjct: 524 DALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSD 583
Query: 255 PNLTIYNSFINGLCKMASTDVA---------------------KNLVDELRKRKL----- 288
L + N I LCK S + A K LVD LR
Sbjct: 584 VCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVV 643
Query: 289 ---------LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
+D + +I+G G + +A L + KS G++ N +TYN+LIN LC+
Sbjct: 644 NAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQ 703
Query: 340 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 399
GC EA L + G+ P +TY LI + K+ + L D M+ KG++P+ Y
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIY 763
Query: 400 DAIVTPF 406
++IV +
Sbjct: 764 NSIVDGY 770
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 179/381 (46%), Gaps = 27/381 (7%)
Query: 42 SVWPNSVSYNSIINGFC-----KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 96
S++P + +S+I+GF GLL+ + L + G PS T+ +LI + G
Sbjct: 92 SIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRN---HGAFPSSLTFCSLIYRFVEKG 148
Query: 97 SLEESLRLCDEMVERGL---FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI-CPDQ 152
++ ++ + + M + + F N V ++++ + G E A +D + P+
Sbjct: 149 EMDNAIEVLEMMTNKNVNYPFDNFVC-SAVISGFCKIGKPELALGFFESAVDSGVLVPNL 207
Query: 153 YSYAILTEGLCRNGYLTEAL----KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 208
+Y L LC+ G + E +L ++ +FD + F N + Y K
Sbjct: 208 VTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCV---FYSNWIHGYF-KGGALVDALM 263
Query: 209 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 268
M+ +G+ DV + + +IDG K GN E+AL L MIK +PNL Y + I GLC
Sbjct: 264 QDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC 323
Query: 269 KMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 327
KM + A L + + + +D + TLI G G ++ AF + +M+ G+ + +
Sbjct: 324 KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSIL 383
Query: 328 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
TYNT+IN LC G EA E+ K G+ D ITY+TL+ + K + + V+ +
Sbjct: 384 TYNTVINGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRF 438
Query: 388 ILKGVIPDQKTYDAIVTPFLL 408
+ + D + ++ FLL
Sbjct: 439 LEAKIPMDLVMCNILLKAFLL 459
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 165/376 (43%), Gaps = 39/376 (10%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G CKTG ++ AL++ ++ S +V YN II+ CKKG L A EVL ++
Sbjct: 488 MIKGYCKTGQIEEALEMFNELR----KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELW 543
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G + T TL+ G + L L + + + + N + L + G E
Sbjct: 544 EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFE 603
Query: 135 EA-----------------SKVLSDMIDKHICPDQY-----------------SYAILTE 160
A S +L ++D D Y Y I+
Sbjct: 604 AAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIIN 663
Query: 161 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 220
GLC+ G+L +AL L + + + + N L+N +C+ S+ GL P
Sbjct: 664 GLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 723
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 280
T +ID CK G A +L + M+ PN+ IYNS ++G CK+ T+ A +V
Sbjct: 724 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV 783
Query: 281 D-ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
++ R DA T +++I GY G ++EA + TE K +SA+ + LI C
Sbjct: 784 SRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTK 843
Query: 340 GCDEEAKELMKMMIMQ 355
G EEA+ L++ M++
Sbjct: 844 GRMEEARGLLREMLVS 859
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 165/386 (42%), Gaps = 42/386 (10%)
Query: 38 MTGNSVWPNSVSY-------------------------------------NSIINGFCKK 60
+ + +P+S+++ +++I+GFCK
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 61 GGLLLAEEVLGDMVKAG-FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 119
G LA V +G P++ TY TL+ + G ++E L + + G + V
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 120 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 179
Y++ ++ ++ G + +A +M++K + D SY+IL +GL + G + EAL L +++
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 180 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 239
K + + + ++ +CK +++ G+ D + T+IDG C+ GN
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN 364
Query: 240 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLIS 299
+A + M + QP++ YN+ INGLC A DE+ K + D T++TL+
Sbjct: 365 RAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVSKGVVGDVITYSTLLD 420
Query: 300 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
Y ID + + + V N L+ G EA L + M + P
Sbjct: 421 SYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTP 480
Query: 360 DCITYTTLITHFNKKHHPEEVIALHD 385
D TY T+I + K EE + + +
Sbjct: 481 DTATYATMIKGYCKTGQIEEALEMFN 506
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 185/410 (45%), Gaps = 24/410 (5%)
Query: 7 GGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA 66
G I LLD K ++D L++ ++ + + V N ++ F G A
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRF---LEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 67 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 126
+ + M + P TYAT+I GY + G +EE+L + +E+ + V YN I+
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDA 525
Query: 127 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY------LTEALKLHNQILK 180
L + G ++ A++VL ++ +K + D ++ L + NG L L+ N +
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVC 585
Query: 181 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP---PDVYTKATVIDGNCKLGN 237
++ DA L +CK M +GL P K T++D L +
Sbjct: 586 LGMLNDAILL------LCKRGSFEAAIEVYMIMRRKGLTVTFPSTILK-TLVD---NLRS 635
Query: 238 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNT 296
+ L + N ++ Y INGLCK A NL + R + L+ T+N+
Sbjct: 636 LDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNS 695
Query: 297 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
LI+G G + EA L ++++GL + VTY LI+ LCK G +A++L+ M+ +G
Sbjct: 696 LINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKG 755
Query: 357 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ P+ I Y +++ + K E+ + + ++ V PD T +++ +
Sbjct: 756 LVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGY 805
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 3/197 (1%)
Query: 2 TLIGSGGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG 61
T + S I ++++G CK G L +K + + V N+++YNS+ING C++G
Sbjct: 648 TTLSSMDVIDYTIIINGLCKEGFL---VKALNLCSFAKSRGVTLNTITYNSLINGLCQQG 704
Query: 62 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 121
L+ A + + G PS TY LID + G ++ +L D MV +GL PNI++YN
Sbjct: 705 CLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYN 764
Query: 122 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 181
SI+ + G E+A +V+S + + PD ++ + + +G C+ G + EAL + +
Sbjct: 765 SIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDK 824
Query: 182 DLIEDAFSLNILLNYIC 198
++ D F L+ C
Sbjct: 825 NISADFFGFLFLIKGFC 841
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 168/366 (45%), Gaps = 17/366 (4%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G D + M +M+L P++ +Y ++I G+CK G + A E+ ++ K+ +V
Sbjct: 464 GEADALYRAMPEMDLT------PDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV 517
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS- 141
Y +ID + G L+ + + E+ E+GL+ +I ++L+ ++ +G + ++
Sbjct: 518 -CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYG 576
Query: 142 -DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI--C 198
+ ++ +C + AIL LC+ G A++++ I++ + F IL +
Sbjct: 577 LEQLNSDVCLGMLNDAILL--LCKRGSFEAAIEVY-MIMRRKGLTVTFPSTILKTLVDNL 633
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
+S G + DV +I+G CK G KAL L + N
Sbjct: 634 RSLDAYLLVVNAGETTLSSM--DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTI 691
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEM 317
YNS INGLC+ A L D L L+ + T+ LI G +A L M
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 377
S GL N + YN++++ CK G E+A ++ +M + PD T +++I + KK
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDM 811
Query: 378 EEVIAL 383
EE +++
Sbjct: 812 EEALSV 817
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 37/228 (16%)
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAK 277
P D + + VI G CK+G E AL + + PNL Y + ++ LC++ D +
Sbjct: 168 PFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVR 227
Query: 278 NLVDEL------------------------------RKRKLL------DATTFNTLISGY 301
+LV L + R+++ D +++ LI G
Sbjct: 228 DLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGL 287
Query: 302 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 361
S G ++EA GL +M G+ N +TY +I LCK G EEA L ++ GI D
Sbjct: 288 SKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDE 347
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
Y TLI +K + ++ M +G+ P TY+ ++ +A
Sbjct: 348 FLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 11/247 (4%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
+ Y IING CK+G L+ A + G + TY +LI+G + G L E+LRL D
Sbjct: 656 IDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDS 715
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 167
+ GL P+ V Y ++ L + G +A K+L M+ K + P+ Y + +G C+ G
Sbjct: 716 LENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQ 775
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
+A+++ ++ + + DAF+++ ++ CK + + D +
Sbjct: 776 TEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 835
Query: 228 VIDGNCKLGNTEKALRLYNGM------IKMDEQPNLTIYNS-----FINGLCKMASTDVA 276
+I G C G E+A L M +K+ + + + S F+ LC+ A
Sbjct: 836 LIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQA 895
Query: 277 KNLVDEL 283
++DE+
Sbjct: 896 IKILDEI 902
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 169/357 (47%), Gaps = 6/357 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL CK L A++V++ LM + + P++ +Y ++N CK+G + A +++ M
Sbjct: 112 LLYDLCKANRLKKAIRVIE---LMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKME 168
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G+ + TY L+ G GSL +SL+ + ++++GL PN Y+ +L Y+ +
Sbjct: 169 DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTD 228
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA K+L ++I K P+ SY +L G C+ G +A+ L ++ + S NILL
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+C M P V T +I+ G TE+AL++ M K + Q
Sbjct: 289 RCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQ 348
Query: 255 PNLTI--YNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
+T YN I LCK D+ +DE+ R+ + T+N + S ++ ++ EAF
Sbjct: 349 FRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAF 408
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+ + + Y ++I LC+ G A +L+ M G PD TY+ LI
Sbjct: 409 YIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALI 465
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 3/330 (0%)
Query: 76 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
+ ++P + + + D + +L +S + +V G PN+ +LY L + +++
Sbjct: 65 SSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKK 124
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
A +V+ M+ I PD +Y L LC+ G + A++L ++ + + N L+
Sbjct: 125 AIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVR 184
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+C ++ +GL P+ +T + +++ K T++A++L + +I +P
Sbjct: 185 GLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP 244
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLT 314
NL YN + G CK TD A L EL + + ++N L+ G+ +EA L
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM--QGIRPDCITYTTLITHFN 372
EM + + VTYN LIN L +G E+A +++K M R +Y +I
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLC 364
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
K+ + V+ D MI + P++ TY+AI
Sbjct: 365 KEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 165/376 (43%), Gaps = 14/376 (3%)
Query: 36 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 95
+L+TG PN ++ CK L A V+ MV +G P Y L++ +
Sbjct: 96 SLVTGGH-KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKR 154
Query: 96 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 155
G++ +++L ++M + G N V YN+++ L G + ++ + + ++ K + P+ ++Y
Sbjct: 155 GNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTY 214
Query: 156 AILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 215
+ L E + EA+KL ++I+ + S N+LL CK +
Sbjct: 215 SFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPA 274
Query: 216 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
+G +V + ++ C G E+A L M D P++ YN IN L T+
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 276 AKNLVDELRK---RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 332
A ++ E+ K + + AT++N +I+ G++D EM N TYN +
Sbjct: 335 ALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Query: 333 INLLCKNGCDEEAKELMKMMIMQGI--RPDCIT---YTTLITHFNKKHHPEEVIALHDYM 387
+L C+ +K I+Q + + C T Y ++IT +K + L M
Sbjct: 395 GSL-----CEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEM 449
Query: 388 ILKGVIPDQKTYDAIV 403
G PD TY A++
Sbjct: 450 TRCGFDPDAHTYSALI 465
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 182/402 (45%), Gaps = 14/402 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+ G C GSL+ +L+ ++++ + PN+ +Y+ ++ K+ G A ++L ++
Sbjct: 181 ALVRGLCMLGSLNQSLQFVERL---MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G EP++ +Y L+ G+ + G ++++ L E+ +G N+V YN +L L G
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK--FDLIEDAFSLN 191
EEA+ +L++M P +Y IL L +G +AL++ ++ K A S N
Sbjct: 298 EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYN 357
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK---ATVIDGNCKLGNTEKALRLYNGM 248
++ +CK MI R P+ T ++ + N K+ ++A + +
Sbjct: 358 PVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKV---QEAFYIIQSL 414
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQI 307
+ Y S I LC+ +T A L+ E+ + DA T++ LI G G
Sbjct: 415 SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Query: 308 DEAFGLTTEMK-SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
A + + M+ S +N +I LCK + A E+ +MM+ + P+ TY
Sbjct: 475 TGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAI 534
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
L+ + E + D + L+ VI Q D IV F L
Sbjct: 535 LVEGIAHEDELELAKEVLDELRLRKVI-GQNAVDRIVMQFNL 575
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 142/302 (47%), Gaps = 5/302 (1%)
Query: 70 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
L +V G +P+V L+ + L++++R+ + MV G+ P+ Y ++ L +
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
G++ A +++ M D + +Y L GLC G L ++L+ ++++ L +AF+
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
+ LL K +I +G P++ + ++ G CK G T+ A+ L+ +
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKLLDATTFNTLISGYSNSGQID 308
+ N+ YN + LC + A +L+ E+ + T+N LI+ + G+ +
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 309 EAFGLTTEMKSLGLSANRVT---YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 365
+A + EM S G RVT YN +I LCK G + + + MI + +P+ TY
Sbjct: 334 QALQVLKEM-SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN 392
Query: 366 TL 367
+
Sbjct: 393 AI 394
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 34/195 (17%)
Query: 212 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 271
S++T G P+V ++ CK +KA+R+ M+ P+ + Y +N LCK
Sbjct: 96 SLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK-- 153
Query: 272 STDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
G + A L +M+ G +N VTYN
Sbjct: 154 --------------------------------RGNVGYAMQLVEKMEDHGYPSNTVTYNA 181
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
L+ LC G ++ + ++ ++ +G+ P+ TY+ L+ K+ +E + L D +I+KG
Sbjct: 182 LVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
Query: 392 VIPDQKTYDAIVTPF 406
P+ +Y+ ++T F
Sbjct: 242 GEPNLVSYNVLLTGF 256
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 188/394 (47%), Gaps = 11/394 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+ G CK DL ++ M + P+ ++N ++ C++ + A + MV
Sbjct: 85 FISGLCKVKKFDLIDALLSDMETL---GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G EP V +Y LI+G R G + +++ + + M+ G+ P+ +++ L ++
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 135 EASKVLSDMI-DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A +++++ I + Y L G C+ G + +A L + + K D + N+L
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
LNY + M+ G+ D Y+ ++ +C++ + +K YN M+K E
Sbjct: 262 LNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC---YNFMVKEME 318
Query: 254 QP---NLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 309
++ Y++ I C+ ++T A L +E+R++ + ++ T+ +LI + G
Sbjct: 319 PRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSV 378
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
A L +M LGLS +R+ Y T+++ LCK+G ++A + MI I PD I+Y +LI+
Sbjct: 379 AKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLIS 438
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ E I L + M K PD+ T+ I+
Sbjct: 439 GLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 180/386 (46%), Gaps = 5/386 (1%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+ +LA + M M G S+ P +Y+ I+G CK L + +L DM GF P
Sbjct: 56 RESRFELAEAIYWDMKPM-GFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIP 112
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
+ + +D R + +++ MV+RG P++V Y ++ L+R G + +A ++
Sbjct: 113 DIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIW 172
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNILLNYICK 199
+ MI + PD + A L GLC + A ++ + +K ++ N L++ CK
Sbjct: 173 NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
+ M G PD+ T +++ ++A + M++ Q +
Sbjct: 233 AGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYS 292
Query: 260 YNSFINGLCKMASTDVAKN-LVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
YN + C+++ D N +V E+ R D +++TLI + + +A+ L EM+
Sbjct: 293 YNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMR 352
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
G+ N VTY +LI + G AK+L+ M G+ PD I YTT++ H K + +
Sbjct: 353 QKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Query: 379 EVIALHDYMILKGVIPDQKTYDAIVT 404
+ + + MI + PD +Y+++++
Sbjct: 413 KAYGVFNDMIEHEITPDAISYNSLIS 438
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 11/333 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G C +DLA +++ + + V ++V YN++I+GFCK G + AE + M
Sbjct: 190 LVVGLCHARKVDLAYEMVAEE--IKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G EP + TY L++ Y L+ + + EMV G+ + YN +L RH +
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLK---RHCRVS 304
Query: 135 EASKVLSDMIDKHICP----DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
K + M+ K + P D SY+ L E CR +A +L ++ + ++ + +
Sbjct: 305 HPDKCYNFMV-KEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY 363
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
L+ + M GL PD T++D CK GN +KA ++N MI+
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 309
+ P+ YNS I+GLC+ A L ++++ ++ D TF +I G ++
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSA 483
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
A+ + +M G + +R +TLI C D
Sbjct: 484 AYKVWDQMMDKGFTLDRDVSDTLIKASCSMSAD 516
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 173/357 (48%), Gaps = 5/357 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L++G + G + A+++ N M + V P++ + +++ G C + LA E++ +
Sbjct: 154 ILINGLFRAGKVTDAVEIW---NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEE 210
Query: 74 VK-AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
+K A + S Y LI G+ + G +E++ L M + G P++V YN +L + Y +
Sbjct: 211 IKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNM 270
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
++ A V+++M+ I D YSY L + CR + + + ++ D S +
Sbjct: 271 LKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYST 330
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L+ C++ M +G+ +V T ++I + GN+ A +L + M ++
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
P+ Y + ++ LCK + D A + +++ + ++ DA ++N+LISG SG++ EA
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAI 450
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
L +MK + +T+ +I L + A ++ M+ +G D TLI
Sbjct: 451 KLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 183/384 (47%), Gaps = 12/384 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMN---LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 70
+L++ CK+ +D AL+V ++M GN + +S+ +N++I+G CK G L AEE+L
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 71 GDM-VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
M ++ P+ TY LIDGY R G LE + + M E + PN+V N+I+ + R
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
H + A DM + + + +Y L C + +A+ + ++L+ DA
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
L++ +C+ + G D+ +I C N EK + M
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
K ++P+ YN+ I+ K + + +++++R+ L TT+ +I Y + G++D
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 309 EAFGLTTEMKSLGLSA----NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
EA L K +GL + N V YN LIN K G +A L + M M+ +RP+ TY
Sbjct: 634 EALKL---FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 365 TTLITHFNKKHHPEEVIALHDYMI 388
L N+K E ++ L D M+
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMV 714
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 172/385 (44%), Gaps = 8/385 (2%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
K++ ++ + + V PNSV I+ CK A ++L D++K + L+
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH-- 147
R + L +M E + P++V ++ L + ++EA +V M K
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD 361
Query: 148 ----ICPDQYSYAILTEGLCRNGYLTEALKLHNQI-LKFDLIEDAFSLNILLNYICKSXX 202
I D + L +GLC+ G L EA +L ++ L+ + +A + N L++ C++
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGK 421
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
M + P+V T T++ G C+ A+ + M K + N+ Y +
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
I+ C +++ + A +++ + DA + LISG + +A + ++K G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
S + + YN LI L C E+ E++ M +G +PD ITY TLI+ F K E V
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 382 ALHDYMILKGVIPDQKTYDAIVTPF 406
+ + M G+ P TY A++ +
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAY 626
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 170/373 (45%), Gaps = 17/373 (4%)
Query: 43 VWPNSVSYNSIINGFCKKGGLLLAEEVL----------GDMVKAGFEPSVRTYATLIDGY 92
+ P+ V+ +IN CK + A EV G+++KA S+ + TLIDG
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKAD---SIH-FNTLIDGL 380
Query: 93 ARWGSLEESLRLCDEM-VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 151
+ G L+E+ L M +E PN V YN ++ R G +E A +V+S M + I P+
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 211
+ + G+CR+ L A+ + K + + + L++ C
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYE 500
Query: 212 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC-KM 270
M+ G PD +I G C++ A+R+ + + +L YN I C K
Sbjct: 501 KMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 271 ASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
+ V + L D ++ K D+ T+NTLIS + + + +M+ GL TY
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 331 TLINLLCKNGCDEEAKELMK-MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 389
+I+ C G +EA +L K M + + P+ + Y LI F+K + + ++L + M +
Sbjct: 621 AVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 390 KGVIPDQKTYDAI 402
K V P+ +TY+A+
Sbjct: 681 KMVRPNVETYNAL 693
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 166/379 (43%), Gaps = 24/379 (6%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMV-KAGFEPSVRTYATLIDGYA---RWGSLEES 101
NS N +++ + G + A +VL +M+ K P R A ++ R + E+
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKI 243
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
+ L G+ PN V + L ++ A +LSD++ + + L
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 162 LCRNGYLTEALKLHNQILKFDLIE---DAFSLNILLNYICKSXXXXXXXXXXGSMITRG- 217
L RN ++ ++++ +LK D ++ D +L IL+N +CKS M RG
Sbjct: 304 LGRNMDIS---RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGK 358
Query: 218 -------LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ--PNLTIYNSFINGLC 268
+ D T+IDG CK+G ++A L M K++E+ PN YN I+G C
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM-KLEERCVPNAVTYNCLIDGYC 417
Query: 269 KMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 327
+ + AK +V +++ ++ + T NT++ G ++ A +M+ G+ N V
Sbjct: 418 RAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVV 477
Query: 328 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
TY TLI+ C E+A + M+ G PD Y LI+ + + I + + +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 388 ILKGVIPDQKTYDAIVTPF 406
G D Y+ ++ F
Sbjct: 538 KEGGFSLDLLAYNMLIGLF 556
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
A KV + + M P+S++YN++I+ F K E ++ M + G +P+V TY
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 88 LIDGYARWGSLEESLRLCDEM-VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 146
+ID Y G L+E+L+L +M + + PN V+YN ++ + G+ +A + +M K
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 147 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 180
+ P+ +Y L + L LKL +++++
Sbjct: 682 MVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 180/390 (46%), Gaps = 4/390 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G + LD A+ +++ M +M+G P++++YN II CKKG + A +L DM
Sbjct: 145 LVRGLARIDQLDKAMCILRVM-VMSGGV--PDTITYNMIIGNLCKKGHIRTALVLLEDMS 201
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+G P V TY T+I +G+ E+++R + ++ G P ++ Y ++ + R+
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA 261
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A +VL DM + PD +Y L CR G L E + IL L + + N LL
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +C M P V T +I+G CK +A+ + M++
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGL 313
P++ YN+ + + K D A L+ L+ T+N++I G + G + +A L
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+M G+ + +T +LI C+ EEA +++K +G TY +I K
Sbjct: 442 YHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCK 501
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K E I + + M+ G PD+ Y AIV
Sbjct: 502 KKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 173/366 (47%), Gaps = 4/366 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+L C G L A K+++ +M ++ P+ S ++++ G + L A +L MV
Sbjct: 110 ILHNLCSNGKLTDACKLVE---VMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMV 166
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+G P TY +I + G + +L L ++M G P+++ YN+++ ++ +G+ E
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A + D + P +Y +L E +CR A+++ + D + N L+
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
NY C+ +++ GL + T T++ C ++ + N M +
Sbjct: 287 NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC 346
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P + YN INGLCK A + ++ ++K L D T+NT++ S G +D+A L
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+K+ +TYN++I+ L K G ++A EL M+ GI PD IT +LI F +
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
Query: 374 KHHPEE 379
+ EE
Sbjct: 467 ANLVEE 472
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 171/388 (44%), Gaps = 2/388 (0%)
Query: 24 SLDLALKVMKKMNLMTGNSVWPN-SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
+L +K MK+ L + + N + N I++ C G L A +++ M + P
Sbjct: 80 NLRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHF 139
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+ + L+ G AR L++++ + MV G P+ + YN I+ L + G + A +L D
Sbjct: 140 PSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLED 199
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M PD +Y + + G +A++ L+ + +L+ +C+
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
M G PD+ T ++++ NC+ GN E+ + ++ + N YN+
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
++ LC D + +++ + + T+N LI+G + + A +M
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
+ VTYNT++ + K G ++A EL+ ++ P ITY ++I KK ++ +
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439
Query: 382 ALHDYMILKGVIPDQKTYDAIVTPFLLA 409
L+ M+ G+ PD T +++ F A
Sbjct: 440 ELYHQMLDAGIFPDDITRRSLIYGFCRA 467
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 130/268 (48%), Gaps = 7/268 (2%)
Query: 8 GCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 63
GC + V L++ C+ G+L+ V++ + + + N+V+YN++++ C
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI---LSHGLELNTVTYNTLLHSLCSHEYW 330
Query: 64 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 123
EE+L M + + P+V TY LI+G + L ++ +M+E+ P+IV YN++
Sbjct: 331 DEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTV 390
Query: 124 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
L + + G +++A ++L + + P +Y + +GL + G + +AL+L++Q+L +
Sbjct: 391 LGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI 450
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
D + L+ C++ RG T VI G CK E A+
Sbjct: 451 FPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIE 510
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCKMA 271
+ M+ +P+ TIY + + G+ +M
Sbjct: 511 VVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+L K G +D A++++ L+ P ++YNS+I+G KKG + A E+ M+
Sbjct: 390 VLGAMSKEGMVDDAIELL---GLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQML 446
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
AG P T +LI G+ R +EE+ ++ E RG Y ++ L + ++E
Sbjct: 447 DAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIE 506
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 172
A +V+ M+ PD+ Y + +G+ G +EA+
Sbjct: 507 MAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 177/394 (44%), Gaps = 4/394 (1%)
Query: 14 VLLDGACKTGSLDLALKVMK-KMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 72
L G DLAL+ M S+ NSV II+ K+G + A +
Sbjct: 140 AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSV-VAIIISMLGKEGRVSSAANMFNG 198
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG- 131
+ + GF V +Y +LI +A G E++ + +M E G P ++ YN IL + G
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
+ + ++ M I PD Y+Y L R EA ++ ++ D + N
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
LL+ KS M+ G P + T ++I + G ++A+ L N M +
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA 310
+P++ Y + ++G + + A ++ +E+R + TFN I Y N G+ E
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
+ E+ GLS + VT+NTL+ + +NG D E + K M G P+ T+ TLI+
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+++ E+ + ++ M+ GV PD TY+ ++
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 187/388 (48%), Gaps = 9/388 (2%)
Query: 20 CKTGSLDL-ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 78
CK GSL A +V ++M G S + V+YN++++ + K A +VL +MV GF
Sbjct: 289 CKRGSLHQEAAQVFEEMK-AAGFSY--DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
PS+ TY +LI YAR G L+E++ L ++M E+G P++ Y ++L R G +E A
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
+ +M + P+ ++ + G TE +K+ ++I L D + N LL
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
++ M G P+ T T+I + G+ E+A+ +Y M+ P+L+
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEM 317
YN+ + L + + ++ ++ E+ R + T+ +L+ Y+N +I L E+
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 318 KSLGLSANRVTYNTLINLLCKNGCD--EEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
S + V TL+ L+C CD EA+ + +G PD T ++++ + ++
Sbjct: 586 YSGVIEPRAVLLKTLV-LVCSK-CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + DYM +G P TY++++
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 180/382 (47%), Gaps = 39/382 (10%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G +K+ ++N+ + P+ V++N+++ F + G V +M +AGF P
Sbjct: 433 GKFTEMMKIFDEINVC---GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 489
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
T+ TLI Y+R GS E+++ + M++ G+ P++ YN++L L R G E++ KVL++
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M D P++ +Y L NG E +H+ L E+ +S
Sbjct: 550 MEDGRCKPNELTYCSLLHAYA-NG--KEIGLMHS------LAEEVYS------------- 587
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
G + R + + ++ C L +A R ++ + + P++T NS
Sbjct: 588 --------GVIEPRAV---LLKTLVLVCSKCDL--LPEAERAFSELKERGFSPDITTLNS 634
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
++ + A ++D +++R + T+N+L+ +S S ++ + E+ + G
Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
+ + ++YNT+I C+N +A + M GI PD ITY T I + EE I
Sbjct: 695 IKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754
Query: 382 ALHDYMILKGVIPDQKTYDAIV 403
+ YMI G P+Q TY++IV
Sbjct: 755 GVVRYMIKHGCRPNQNTYNSIV 776
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 58 CKKGGLLL-AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN 116
C K LL AE ++ + GF P + T +++ Y R + ++ + D M ERG P+
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 117 IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN 176
+ YNS++Y R D ++ ++L +++ K I PD SY + CRN + +A ++ +
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 177 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 236
+ M G+ PDV T T I
Sbjct: 724 E-----------------------------------MRNSGIVPDVITYNTFIGSYAADS 748
Query: 237 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
E+A+ + MIK +PN YNS ++G CK+ D AK V++LR
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 2/195 (1%)
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST-DV 275
G DVY+ ++I G +A+ ++ M + +P L YN +N KM + +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 276 AKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
+LV++++ + DA T+NTLI+ EA + EMK+ G S ++VTYN L++
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
+ K+ +EA +++ M++ G P +TY +LI+ + + +E + L + M KG P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 395 DQKTYDAIVTPFLLA 409
D TY +++ F A
Sbjct: 383 DVFTYTTLLSGFERA 397
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 137/314 (43%), Gaps = 4/314 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+ + GS + A+ V ++M L G V P+ +YN+++ + G +E+VL +M
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRM-LDAG--VTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+P+ TY +L+ YA + L +E+ + P V+ +++ + +
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA + S++ ++ PD + + R + +A + + + + + N L
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +S ++ +G+ PD+ + TVI C+ A R+++ M
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
P++ YN+FI + + A +V + K + T+N+++ GY + DEA
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790
Query: 313 LTTEMKSLGLSANR 326
++++L A +
Sbjct: 791 FVEDLRNLDPHAPK 804
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 175/391 (44%), Gaps = 40/391 (10%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
K G ++ L V +KM N + P +YN ++NG + AE V M +P
Sbjct: 199 KLGMVEELLWVWRKMK---ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKP 255
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
+ TY T+I GY + G ++++ +M RG + + Y +++ Y D +
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+M +K I ++++++ GLC+ G L E +
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE------------------------ 351
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
+MI +G P+V +IDG K G+ E A+RL + MI +P++ Y
Sbjct: 352 -----------NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 400
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
+ +NGLCK + A + R L +++ +++LI G +G++DEA L EM
Sbjct: 401 SVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSE 460
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPDCITYTTLITHFNKKHHPE 378
G + + YN LI+ K+ +EA L K M + G TYT L++ K+H E
Sbjct: 461 KGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNE 520
Query: 379 EVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
E + L D MI KG+ P + A+ T L+
Sbjct: 521 EALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 3/318 (0%)
Query: 40 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 99
G V P++ S +I G CK+G L V +M++ G +P+V Y LIDGYA+ GS+E
Sbjct: 322 GIQVPPHAFSL--VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
+++RL M++ G P++V Y+ ++ L ++G +EEA + + Y+ L
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLI 439
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GL 218
+GL + G + EA +L ++ + D++ N L++ K M G
Sbjct: 440 DGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGC 499
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
VYT ++ G K E+AL+L++ MI P + + GLC A
Sbjct: 500 DQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACK 559
Query: 279 LVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
++DEL ++ +I+ +G+I EA L + G +IN L K
Sbjct: 560 ILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRK 619
Query: 339 NGCDEEAKELMKMMIMQG 356
G + A +LM I G
Sbjct: 620 VGKADLAMKLMHSKIGIG 637
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 165/399 (41%), Gaps = 30/399 (7%)
Query: 31 VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG------------- 77
V + +NL+ G S S S ++GFC+K + L+ + ++K+
Sbjct: 86 VSQILNLLDG------SASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFF 139
Query: 78 --------FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP-NIVVYNSILYWLY 128
+ ++ Y +L+D A ++ +R +++ FP + N+++
Sbjct: 140 CWSRKQKKYTHNLECYVSLVDVLALAKDVDR-IRFVSSEIKKFEFPMTVSAANALIKSFG 198
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
+ G +EE V M + I P Y+Y L GL ++ A ++ + + D
Sbjct: 199 KLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIV 258
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ N ++ CK+ M TRG D T T+I + + LY M
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQI 307
+ Q ++ I GLCK + + + + RK + + LI GY+ SG +
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 308 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
++A L M G + VTY+ ++N LCKNG EEA + G+ + + Y++L
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSL 438
Query: 368 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
I K +E L + M KG D Y+A++ F
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 7/269 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+DG K+GS++ A++++ + M P+ V+Y+ ++NG CK G + A +
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHR---MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 423
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G + Y++LIDG + G ++E+ RL +EM E+G + YN+++ +H +
Sbjct: 424 RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKV 483
Query: 134 EEASKVLSDMIDKHICPDQ--YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
+EA + M ++ C DQ Y+Y IL G+ + EALKL + ++ + A
Sbjct: 484 DEAIALFKRMEEEEGC-DQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFR 542
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
L +C S + G+ D + +I+ CK G ++A +L +G+ +
Sbjct: 543 ALSTGLCLSGKVARACKILDELAPMGVILDAACE-DMINTLCKAGRIKEACKLADGITER 601
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLV 280
+ I IN L K+ D+A L+
Sbjct: 602 GREVPGRIRTVMINALRKVGKADLAMKLM 630
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 175/381 (45%), Gaps = 10/381 (2%)
Query: 6 SGGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL-- 63
S C+ L+ G C ++D AL + MN + PN V+ N I++ C+KG +
Sbjct: 188 SPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKY---GIRPNRVTCNIIVHALCQKGVIGN 244
Query: 64 ---LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 120
L EE+L D +A + L+D + G++ ++L + EM ++ + + VVY
Sbjct: 245 NNKKLLEEIL-DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 121 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 180
N I+ L G+M A + DM+ + + PD ++Y L LC+ G EA LH +
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 181 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 240
+ D S +++ +C SM+ L P+V VIDG + G+T
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 241 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLIS 299
AL + N M+ +PN+ N+ I+G K A + +E+R K+ D TT+N L+
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 300 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
G + AF L EM G + +TY L+ LC G ++A+ L+ + GI
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Query: 360 DCITYTTLITHFNKKHHPEEV 380
D + + L + + P E
Sbjct: 544 DHVPFLILAKKYTRLQRPGEA 564
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 195/429 (45%), Gaps = 50/429 (11%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C G LD AL + KKM + +G V P +++N ++NG CK G + A+ ++ +M + G
Sbjct: 132 CLQGKLDAALWLRKKM-IYSG--VIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPS 188
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL------------ 127
P+ +Y TLI G +++++L L + M + G+ PN V N I++ L
Sbjct: 189 PNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 128 ---------------------------YRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 160
+++G++ +A +V +M K++ D Y ++
Sbjct: 249 LLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR 308
Query: 161 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 220
GLC +G + A ++K + D F+ N L++ +CK G+M G+ P
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 280
D + +I G C G+ +A M+K P + ++N I+G + T A +++
Sbjct: 369 DQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVL 428
Query: 281 DELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
+ + + + T N LI GY G++ +A+ + EM+S + + TYN L+ C
Sbjct: 429 NLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTL 488
Query: 340 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 399
G A +L M+ +G +PD ITYT L+ K ++ +L + G+ D
Sbjct: 489 GHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDH--- 545
Query: 400 DAIVTPFLL 408
PFL+
Sbjct: 546 ----VPFLI 550
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 144/299 (48%), Gaps = 4/299 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+D K G++ AL+V K+M + +V +SV YN II G C G ++ A + DM
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEM---SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
VK G P V TY TLI + G +E+ L M G+ P+ + Y I+ L HGD+
Sbjct: 327 VKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDV 386
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A++ L M+ + P+ + ++ +G R G + AL + N +L + + + ++ N L
Sbjct: 387 NRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNAL 446
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ K M + + PD T ++ C LG+ A +LY+ M++
Sbjct: 447 IHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGC 506
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
QP++ Y + GLC A++L+ ++ + +D F L Y+ + EA+
Sbjct: 507 QPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 166/394 (42%), Gaps = 40/394 (10%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
++SI+ C +G L A + M+ +G P + T+ L++G + G +E++ L EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC------ 163
E G PN V YN+++ L ++++A + + M I P++ + I+ LC
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 164 ---------------------------------RNGYLTEALKLHNQILKFDLIEDAFSL 190
+NG + +AL++ ++ + ++ D+
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
N+++ +C S M+ RG+ PDV+T T+I CK G ++A L+ M
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 309
P+ Y I GLC + A + + K LL + +N +I GY G
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
A + M S G+ N T N LI+ K G +A + M I PD TY L+
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
H L+D M+ +G PD TY +V
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELV 517
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 163/335 (48%), Gaps = 5/335 (1%)
Query: 78 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 137
++ + +++++ G L+ +L L +M+ G+ P ++ +N +L L + G +E+A
Sbjct: 117 YDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKAD 176
Query: 138 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 197
++ +M + P+ SY L +GLC + +AL L N + K+ + + + NI+++ +
Sbjct: 177 GLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHAL 236
Query: 198 CKSXXXXXXXXXXGSMI----TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
C+ I P D+ ++D K GN +AL ++ M + +
Sbjct: 237 CQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNV 296
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
+ +YN I GLC + A + ++ KR + D T+NTLIS G+ DEA
Sbjct: 297 PADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACD 356
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L M++ G++ ++++Y +I LC +G A E + M+ + P+ + + +I +
Sbjct: 357 LHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYG 416
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
+ +++ + M+ GV P+ T +A++ ++
Sbjct: 417 RYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV 451
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 104/268 (38%), Gaps = 42/268 (15%)
Query: 181 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD--VYTKATVIDGNCKLGNT 238
+D ED ++ +L+YI KS T+ D + ++++ C G
Sbjct: 78 YDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKL 137
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTL 297
+ AL L MI P L +N +NGLCK + A LV E+R+ + ++NTL
Sbjct: 138 DAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTL 197
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC-------------------- 337
I G + +D+A L M G+ NRVT N +++ LC
Sbjct: 198 IKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSS 257
Query: 338 -------------------KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
KNG +A E+ K M + + D + Y +I +
Sbjct: 258 QANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMV 317
Query: 379 EVIALHDYMILKGVIPDQKTYDAIVTPF 406
M+ +GV PD TY+ +++
Sbjct: 318 AAYGFMCDMVKRGVNPDVFTYNTLISAL 345
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 175/364 (48%), Gaps = 1/364 (0%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P V+Y +IN + K G + A EV M + G + +++TY+ +I+G+ + + +
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
++MV+ G+ P++++YN+I+ G+M+ A + + +M P ++ + G +
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
+G + +L++ + + + + + N L+N + + M G+ + +T
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
++ G +G+T KA + + ++ Y + + CK A + E+
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 285 KRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
R + ++ +N LI G++ G + EA L +MK G+ + TY + I+ K G
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
A + ++ M G++P+ TYTTLI + + PE+ ++ ++ M G+ PD+ Y ++
Sbjct: 782 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Query: 404 TPFL 407
T L
Sbjct: 842 TSLL 845
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 144/309 (46%), Gaps = 1/309 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + P+ + YN+II+ FC G + A + + +M K P+ RT+ +I GYA+ G
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+ SL + D M G P + +N ++ L ME+A ++L +M + ++++Y
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ +G G +A + ++ L D F+ LL CKS M R
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+P + + +IDG + G+ +A L M K +P++ Y SFI+ K + A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
++E+ + + T+ TLI G++ + ++A EMK++G+ ++ Y+ L+ L
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Query: 337 CKNGCDEEA 345
EA
Sbjct: 845 LSRASIAEA 853
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 154/352 (43%), Gaps = 4/352 (1%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+ G + A + ++M + P S Y S+I+ + + A + M + G E
Sbjct: 321 RRGDMHRARETFERMR---ARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEM 377
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
S+ TY+ ++ G+++ G E + DE N +Y I+Y + +ME A ++
Sbjct: 378 SLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 437
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+M ++ I Y + +G + L + ++ + + L+N K
Sbjct: 438 REMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKV 497
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M G+ ++ T + +I+G KL + A ++ M+K +P++ +Y
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILY 557
Query: 261 NSFINGLCKMASTDVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
N+ I+ C M + D A V E++K R TF +I GY+ SG + + + M+
Sbjct: 558 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
G T+N LIN L + E+A E++ M + G+ + TYT ++ +
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 158/395 (40%), Gaps = 71/395 (17%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N+ Y II C+ + AE ++ +M + G + + Y T++DGY ++ L +
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+ E G P +V Y ++ + G + +A +V M ++ + + +Y+++ G
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF--- 529
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
+KL + F + ED M+ G+ PDV
Sbjct: 530 ------VKLKDWANAFAVFED--------------------------MVKEGMKPDVILY 557
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQ------------------------------- 254
+I C +GN ++A++ M K+ +
Sbjct: 558 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 255 ----PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 309
P + +N INGL + + A ++DE+ + + T+ ++ GY++ G +
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 677
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
AF T +++ GL + TY L+ CK+G + A + K M + I + Y LI
Sbjct: 678 AFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILID 737
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+ ++ E L M +GV PD TY + ++
Sbjct: 738 GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 145/364 (39%), Gaps = 36/364 (9%)
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
+PS + ++ Y R G + + + M RG+ P +Y S+++ DM+EA
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNG-------YLTEALKLHN--------------- 176
+ M ++ I +Y+++ G + G + EA ++H
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 177 --------QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-----GLPPDVY 223
+ L ++ E+ I + + G ++ + G P V
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
T +I+ K+G KAL + M + + NL Y+ ING K+ A + +++
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 284 RKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
K + D +N +IS + G +D A EM+ L T+ +I+ K+G
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
+ E+ MM G P T+ LI +K E+ + + D M L GV ++ TY I
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Query: 403 VTPF 406
+ +
Sbjct: 666 MQGY 669
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 38/258 (14%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G + ++ A++++ +M L V N +Y I+ G+ G A E +
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLA---GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G + + TY L+ + G ++ +L + EM R + N VYN ++ R GD+
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA+ ++ M + + PD ++Y + G + A + IE+ +L
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQ---------TIEEMEAL---- 793
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
G+ P++ T T+I G + EKAL Y M M +
Sbjct: 794 ----------------------GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 255 PNLTIYNSFINGLCKMAS 272
P+ +Y+ + L AS
Sbjct: 832 PDKAVYHCLLTSLLSRAS 849
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 85/196 (43%), Gaps = 1/196 (0%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M RG+ P ++I + ++AL M + + +L Y+ + G K
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 273 TDVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
+ A DE ++ K L+A+ + +I + + ++ A L EM+ G+ A Y+T
Sbjct: 395 AEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHT 454
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
+++ +++ + K + G P +TY LI + K + + + M +G
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 392 VIPDQKTYDAIVTPFL 407
V + KTY ++ F+
Sbjct: 515 VKHNLKTYSMMINGFV 530
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 149/302 (49%), Gaps = 2/302 (0%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
++N +I G C G A E+LG M G EP + TY TLI G+ + L ++ + ++
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 109 VERGLF-PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 167
+ P++V Y S++ + G M EAS +L DM+ I P ++ +L +G + G
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
+ A ++ +++ F D + L++ C+ M RG+ P+ +T +
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
+I+ C KA L + D P +YN I+G CK + A +V+E+ K+K
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 288 L-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
D TF LI G+ G++ EA + +M ++G S +++T ++L++ L K G +EA
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 347 EL 348
L
Sbjct: 508 HL 509
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 192/428 (44%), Gaps = 44/428 (10%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA------- 66
+L CK G DLA ++ + M + V PN+ +++ F +KG L A
Sbjct: 108 LLTRSLCKAGLHDLAGQMFE---CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 67 ----------EEVLGDMVKAG--------FEPSVR--------TYATLIDGYARWGSLEE 100
+L +VK F+ +R T+ LI G G E+
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 101 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILT 159
+L L M G P+IV YN+++ + ++ +AS++ D+ +C PD +Y +
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
G C+ G + EA L + +L+ + + N+L++ K+ G MI+ G
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PDV T ++IDG C++G + RL+ M PN Y+ IN LC A+ L
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 280 VDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
+ +L + ++ +N +I G+ +G+++EA + EM+ +++T+ LI C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG----VIP 394
G EA + M+ G PD IT ++L++ K +E L+ + KG V+P
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ-IARKGQSNNVVP 523
Query: 395 -DQKTYDA 401
+ KT +A
Sbjct: 524 LETKTANA 531
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 164/378 (43%), Gaps = 16/378 (4%)
Query: 32 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 91
+ L +S W +YN + CK G LA ++ M G P+ R L+
Sbjct: 92 FSRFKLNIRHSFW----TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 92 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 151
+A G L + L + E + +V NS+L L + +E+A K+ + + C D
Sbjct: 148 FAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND 205
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 211
++ IL GLC G +AL+L + F D + N L+ CKS
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 212 SMITRGL-PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 270
+ + + PDV T ++I G CK G +A L + M+++ P +N ++G K
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 271 ASTDVAKNLVDELRKRKLL-----DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 325
A +E+R + + D TF +LI GY GQ+ + F L EM + G+ N
Sbjct: 326 GEMLTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 385
TY+ LIN LC +A+EL+ + + I P Y +I F K E + +
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 386 YMILKGVIPDQKTYDAIV 403
M K PD+ T+ ++
Sbjct: 442 EMEKKKCKPDKITFTILI 459
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 149/302 (49%), Gaps = 2/302 (0%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
++N +I G C G A E+LG M G EP + TY TLI G+ + L ++ + ++
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 109 VERGLF-PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 167
+ P++V Y S++ + G M EAS +L DM+ I P ++ +L +G + G
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
+ A ++ +++ F D + L++ C+ M RG+ P+ +T +
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
+I+ C KA L + D P +YN I+G CK + A +V+E+ K+K
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 288 L-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
D TF LI G+ G++ EA + +M ++G S +++T ++L++ L K G +EA
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 347 EL 348
L
Sbjct: 508 HL 509
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 192/428 (44%), Gaps = 44/428 (10%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLA------- 66
+L CK G DLA ++ + M + V PN+ +++ F +KG L A
Sbjct: 108 LLTRSLCKAGLHDLAGQMFE---CMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 67 ----------EEVLGDMVKAG--------FEPSVR--------TYATLIDGYARWGSLEE 100
+L +VK F+ +R T+ LI G G E+
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 101 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILT 159
+L L M G P+IV YN+++ + ++ +AS++ D+ +C PD +Y +
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
G C+ G + EA L + +L+ + + N+L++ K+ G MI+ G
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PDV T ++IDG C++G + RL+ M PN Y+ IN LC A+ L
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 280 VDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
+ +L + ++ +N +I G+ +G+++EA + EM+ +++T+ LI C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG----VIP 394
G EA + M+ G PD IT ++L++ K +E L+ + KG V+P
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ-IARKGQSNNVVP 523
Query: 395 -DQKTYDA 401
+ KT +A
Sbjct: 524 LETKTANA 531
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 164/378 (43%), Gaps = 16/378 (4%)
Query: 32 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 91
+ L +S W +YN + CK G LA ++ M G P+ R L+
Sbjct: 92 FSRFKLNIRHSFW----TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 92 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 151
+A G L + L + E + +V NS+L L + +E+A K+ + + C D
Sbjct: 148 FAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND 205
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 211
++ IL GLC G +AL+L + F D + N L+ CKS
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 212 SMITRGL-PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 270
+ + + PDV T ++I G CK G +A L + M+++ P +N ++G K
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 271 ASTDVAKNLVDELRKRKLL-----DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 325
A +E+R + + D TF +LI GY GQ+ + F L EM + G+ N
Sbjct: 326 GEMLTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 385
TY+ LIN LC +A+EL+ + + I P Y +I F K E + +
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 386 YMILKGVIPDQKTYDAIV 403
M K PD+ T+ ++
Sbjct: 442 EMEKKKCKPDKITFTILI 459
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 167/361 (46%), Gaps = 10/361 (2%)
Query: 52 SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER 111
SI G+ + + V M +PS + Y T++ L + + M E
Sbjct: 91 SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREI 150
Query: 112 GLFPNIVVYNSILYWLYRH-GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
GL P + N ++ L R+ G ++ K+ +M + PD Y+Y L GLCR G + E
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 230
A KL ++++ D + L+N +C S M ++G+ P+V+T ++++D
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 231 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL- 289
G CK G + +A+ L+ M+ +PN+ Y + I GLCK A L+D + + L
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT-------LINLLCKNGCD 342
DA + +ISG+ + EA EM G++ NR+T+N ++ LC N
Sbjct: 331 DAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YP 389
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
A L M +GI + T +L+ KK ++ + L D ++ G IP + T+ +
Sbjct: 390 SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Query: 403 V 403
+
Sbjct: 450 I 450
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 166/356 (46%), Gaps = 48/356 (13%)
Query: 24 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE-EVLGDMVKAGFEPSV 82
L+LA K K M + + P S N +I C+ G + A ++ +M K G +P
Sbjct: 136 QLNLAFKFYKNMREI---GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDS 192
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
TY TLI G R+G ++E+ +L EMVE+ P +V Y S++ L +++EA + L +
Sbjct: 193 YTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEE 252
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M K I P+ ++Y+ L +GLC++G +A++L F++
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL------FEM------------------- 287
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
M+ RG P++ T T+I G CK ++A+ L + M +P+ +Y
Sbjct: 288 ----------MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 263 FINGLCKMASTDVAKNLVDEL--------RKRKLLDATTFNTLISGYSNSGQIDEAFGLT 314
I+G C ++ A N +DE+ R + T N ++ G + AF L
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLY 396
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
M+S G+S T +L+ LCK G ++A +L+ ++ G P T+ LI H
Sbjct: 397 LSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGH 452
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 146/305 (47%), Gaps = 6/305 (1%)
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYR-HGDME---EASKVLSDMIDKHICPDQYSYAI 157
+ ++++ R N VV IL + R +G + ++ +V M D P Q +Y
Sbjct: 67 FKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVT 126
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG-SMITR 216
+ L L A K + + + L SLN+L+ +C++ M R
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
G PD YT T+I G C+ G ++A +L+ M++ D P + Y S INGLC + D A
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 277 KNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
++E++ + + + T+++L+ G G+ +A L M + G N VTY TLI
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
LCK +EA EL+ M +QG++PD Y +I+ F E D MIL G+ P+
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Query: 396 QKTYD 400
+ T++
Sbjct: 367 RLTWN 371
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
Query: 217 GLPPDVYTKATVIDGNCK-LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
GLPP V + +I C+ G + L+++ M K P+ Y + I+GLC+ D
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 276 AKNLVDELRKRKLLD-ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
AK L E+ ++ T+ +LI+G S +DEA EMKS G+ N TY++L++
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
LCK+G +A EL +MM+ +G RP+ +TYTTLIT K+ +E + L D M L+G+ P
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 395 DQKTYDAIVTPF 406
D Y +++ F
Sbjct: 331 DAGLYGKVISGF 342
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 181/394 (45%), Gaps = 11/394 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+++ G K G +D LK+ ++M N + +Y+S+I+G C G + AE V ++
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMK---QNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ V TY T++ G+ R G ++ESL L ++E NIV YN ++ L +G +
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKI 375
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA+ + M K D+ +Y I GLC NGY+ +AL + ++ D ++ +
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG---NCKLGNTEKALRLYNGMIK 250
++ +CK M G+ + + +I G + +LG LR M K
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR---EMGK 492
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 309
+P + YN I GLCK A V E+ + D T++ L+ G +ID
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
A L + GL + + +N LI+ LC G ++A +M M + + +TY TL+
Sbjct: 553 ALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLME 612
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
F K + YM G+ PD +Y+ I+
Sbjct: 613 GFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 179/379 (47%), Gaps = 3/379 (0%)
Query: 26 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 85
D AL V K+M + G P SYN+++N F + + E + AG P+++TY
Sbjct: 95 DQALDVFKRMREIFGCE--PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTY 152
Query: 86 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 145
LI + E++ D M + G P++ Y++++ L + G +++A ++ +M +
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 146 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK-FDLIEDAFSLNILLNYICKSXXXX 204
+ + PD Y IL +G + A++L +++L+ + + + NI+++ + K
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVD 272
Query: 205 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 264
M D+YT +++I G C GN +KA ++N + + ++ YN+ +
Sbjct: 273 DCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332
Query: 265 NGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 324
G C+ + L + + ++ ++N LI G +G+IDEA + M + G +A
Sbjct: 333 GGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 325 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 384
++ TY I+ LC NG +A +M+ + G D Y ++I KK EE L
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 385 DYMILKGVIPDQKTYDAIV 403
M GV + +A++
Sbjct: 453 KEMSKHGVELNSHVCNALI 471
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 140/291 (48%), Gaps = 4/291 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+ + G C G ++ AL VM+++ G+ + +Y SII+ CKK L A ++ +M
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGH---LDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G E + LI G R L E+ EM + G P +V YN ++ L + G
Sbjct: 456 SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKF 515
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EAS + +M++ PD +Y+IL GLCR+ + AL+L +Q L+ L D NIL
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ +C +M R ++ T T+++G K+G++ +A ++ M KM
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSN 303
QP++ YN+ + GLC A D+ R + T+N L+ N
Sbjct: 636 QPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 160/355 (45%), Gaps = 5/355 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+L G C+ G + +L++ + M NSV N VSYN +I G + G + A + M
Sbjct: 331 MLGGFCRCGKIKESLELWRIME--HKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G+ TY I G G + ++L + E+ G ++ Y SI+ L + +E
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EAS ++ +M + + + L GL R+ L EA ++ K S NIL+
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI 506
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+CK+ M+ G PD+ T + ++ G C+ + AL L++ ++ +
Sbjct: 507 CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
++ ++N I+GLC + D A ++ + R + T+NTL+ G+ G + A +
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVI 626
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
M +GL + ++YNT++ LC A E GI P T+ L+
Sbjct: 627 WGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%)
Query: 293 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
++NTL++ + + Q + L ++ G++ N TYN LI + CK E+A+ + M
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 353 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
+G +PD +Y+T+I K ++ + L D M +GV PD Y+ ++ FL
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 198/452 (43%), Gaps = 48/452 (10%)
Query: 3 LIGSG---GCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 59
++G G C+ ++L CK +D+ L+ ++K +++ + V YN + K
Sbjct: 344 MLGKGLKVNCVIVSLILQCYCK---MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSK 400
Query: 60 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 119
G + A E+L +M G P V Y TLIDGY G + ++L L DEM+ G+ P+++
Sbjct: 401 LGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 120 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI- 178
YN ++ L R+G EE ++ M + P+ + +++ EGLC + EA + +
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE 520
Query: 179 --------------LKFDLIEDAFSLNILLNY-------------ICKSXXXXXXXXXXG 211
+ L + A+ + L Y +C
Sbjct: 521 QKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLK 580
Query: 212 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 271
M + P +I CKL N +A L++ M++ P+L Y I+ C++
Sbjct: 581 KMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLN 640
Query: 272 STDVAKNLVDELRKRKLL-DATTFNTLISGY-----------SNSGQI--DEAFGLTTEM 317
A++L +++++R + D T+ L+ Y S G++ +A + E
Sbjct: 641 ELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREF 700
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 377
+ G+ + V Y LI+ CK E+A EL MI G+ PD + YTTLI+ + +K +
Sbjct: 701 SAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYI 760
Query: 378 EEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
+ + L + K IP + A+ + L A
Sbjct: 761 DMAVTLVTELSKKYNIPSESFEAAVKSAALKA 792
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 177/409 (43%), Gaps = 12/409 (2%)
Query: 1 MTLIGSGGCIKEWVLLDGACKTGSLDLALKVMKKM---NLMTGNSVWPNSVSYNSIINGF 57
M LI + ++G C TG + A+ ++ ++ + G+ + ++ GF
Sbjct: 237 MLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDL---RAVLGMVVRGF 293
Query: 58 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 117
C + + AE V+ +M + GF V +ID Y + +L E+L D+M+ +GL N
Sbjct: 294 CNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 118 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 177
V+ + IL + EA + + D +I D+ Y + + L + G + EA +L +
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 178 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 237
+ ++ D + L++ C MI G+ PD+ T ++ G + G+
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 238 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTL 297
E+ L +Y M +PN + I GLC A++ L ++ + +F
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASF--- 530
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 357
+ GY +G +A+ ++ + Y L LC G E+A +++K M +
Sbjct: 531 VKGYCEAGLSKKAYKAFVRLE---YPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRV 587
Query: 358 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
P +I F K ++ E L D M+ +G+IPD TY ++ +
Sbjct: 588 EPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTY 636
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 151/360 (41%), Gaps = 39/360 (10%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
N ++N + G + + + + + G + TYA ++ R G+LEE+ L ++E
Sbjct: 185 NFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML---LIE 241
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
++ Y + + L G+ E+A ++ ++ID+ A+L G+ G+ E
Sbjct: 242 N---ESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVL--GMVVRGFCNE 296
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 230
+ + ++ E F L DVY VID
Sbjct: 297 MKMKAAESVIIEMEEIGFGL------------------------------DVYACLAVID 326
Query: 231 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-L 289
CK N +AL + M+ + N I + + CKM A E R + L
Sbjct: 327 RYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFL 386
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
D +N S G+++EAF L EMK G+ + + Y TLI+ C G +A +L+
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 350 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
MI G+ PD ITY L++ + H EEV+ +++ M +G P+ T I+ A
Sbjct: 447 DEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFA 506
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 142/332 (42%), Gaps = 20/332 (6%)
Query: 82 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 141
+R L+ Y G +E+ + + +I N ++ + G + +
Sbjct: 146 IRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFK 205
Query: 142 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIED--AFSLNILLNYICK 199
+ +C ++Y+YAI+ + LCR G L EA L LIE+ F +N +C
Sbjct: 206 QLKQLGLCANEYTYAIVVKALCRKGNLEEAAML--------LIENESVFGYKTFINGLCV 257
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKAT---VIDGNCKLGNTEKALRLYNGMIKMDEQP- 255
+ +I R +A V+ G C N K + +I+M+E
Sbjct: 258 TGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFC---NEMKMKAAESVIIEMEEIGF 314
Query: 256 NLTIYN--SFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
L +Y + I+ CK + A +D++ + L ++ + ++ Y EA
Sbjct: 315 GLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALE 374
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
E + + + +RV YN + L K G EEA EL++ M +GI PD I YTTLI +
Sbjct: 375 KFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYC 434
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+ + + L D MI G+ PD TY+ +V+
Sbjct: 435 LQGKVVDALDLIDEMIGNGMSPDLITYNVLVS 466
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 144/389 (37%), Gaps = 70/389 (17%)
Query: 65 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 124
LA L + + G P+V YATL+ WG L+ L +S+L
Sbjct: 72 LALSFLRQLKEHGVSPNVNAYATLVRILTTWG-LDIKL------------------DSVL 112
Query: 125 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI------LTEGLCRNGYLTEALKLHNQI 178
L ++ + L ++I + + S+ + L + G EA + Q
Sbjct: 113 VELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQS 172
Query: 179 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 238
+ D + D + N L+N + + + GL + YT A V+ C+ GN
Sbjct: 173 KRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNL 232
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA----TTF 294
E+A L + E ++ Y +FINGLC T+ A L+ EL RK L
Sbjct: 233 EEAAML------LIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVL 286
Query: 295 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 354
++ G+ N ++ A + EM+ +G + +I+ CKN EA + M+
Sbjct: 287 GMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLG 346
Query: 355 QGIRPDCIT-----------------------------------YTTLITHFNKKHHPEE 379
+G++ +C+ Y +K EE
Sbjct: 347 KGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEE 406
Query: 380 VIALHDYMILKGVIPDQKTYDAIVTPFLL 408
L M +G++PD Y ++ + L
Sbjct: 407 AFELLQEMKDRGIVPDVINYTTLIDGYCL 435
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 145/297 (48%), Gaps = 4/297 (1%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G +D+AL+ ++M + PN + N +++G+C+ G L E+L DM + GF +
Sbjct: 217 GRVDIALRFYREMRRC---KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD 273
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+Y TLI G+ G L +L+L + M + GL PN+V +N++++ R ++EASKV +
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M ++ P+ +Y L G + G A + + ++ + D + N L+ +CK
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
+ L P+ T + +I G C N ++ LY MI+ PN +N
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 263 FINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
++ C+ D A ++ E+ +R + LD+ T + + +G + G+ L EM+
Sbjct: 454 LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 149/342 (43%), Gaps = 2/342 (0%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G +DL KV + L + ++S+ F A + M GF P+V
Sbjct: 145 GGVDLPAKVFDAL-LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTV 203
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+ + G ++ +LR EM + PN N ++ R G +++ ++L D
Sbjct: 204 ESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQD 263
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M SY L G C G L+ ALKL N + K L + + N L++ C++
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
G M + P+ T T+I+G + G+ E A R Y M+ Q ++ YN+
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
I GLCK A T A V EL K L+ +++TF+ LI G D F L M G
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
N T+N L++ C+N + A ++++ M+ + I D T
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 156/361 (43%), Gaps = 38/361 (10%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFE--PSVRTYATLIDGYARWGSLEESLRLCD 106
S SI+ GG+ L +V ++ + E + R + +L +A +
Sbjct: 133 SAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFM 192
Query: 107 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 166
+M + G P + N+ + L G ++ A + +M I P+ Y+ ++ G CR+G
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 167 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 226
L + ++L + + S N
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYN----------------------------------- 277
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
T+I G+C+ G AL+L N M K QPN+ +N+ I+G C+ A + E++
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 287 KLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
+ T T+NTLI+GYS G + AF +M G+ + +TYN LI LCK +A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 346 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 405
+ +K + + + P+ T++ LI + + + L+ MI G P+++T++ +V+
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 406 F 406
F
Sbjct: 458 F 458
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 145/297 (48%), Gaps = 4/297 (1%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G +D+AL+ ++M + PN + N +++G+C+ G L E+L DM + GF +
Sbjct: 217 GRVDIALRFYREMRRC---KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD 273
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+Y TLI G+ G L +L+L + M + GL PN+V +N++++ R ++EASKV +
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M ++ P+ +Y L G + G A + + ++ + D + N L+ +CK
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
+ L P+ T + +I G C N ++ LY MI+ PN +N
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 263 FINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
++ C+ D A ++ E+ +R + LD+ T + + +G + G+ L EM+
Sbjct: 454 LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 149/342 (43%), Gaps = 2/342 (0%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G +DL KV + L + ++S+ F A + M GF P+V
Sbjct: 145 GGVDLPAKVFDAL-LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTV 203
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+ + G ++ +LR EM + PN N ++ R G +++ ++L D
Sbjct: 204 ESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQD 263
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M SY L G C G L+ ALKL N + K L + + N L++ C++
Sbjct: 264 MERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
G M + P+ T T+I+G + G+ E A R Y M+ Q ++ YN+
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
I GLCK A T A V EL K L+ +++TF+ LI G D F L M G
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
N T+N L++ C+N + A ++++ M+ + I D T
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 156/361 (43%), Gaps = 38/361 (10%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFE--PSVRTYATLIDGYARWGSLEESLRLCD 106
S SI+ GG+ L +V ++ + E + R + +L +A +
Sbjct: 133 SAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFM 192
Query: 107 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 166
+M + G P + N+ + L G ++ A + +M I P+ Y+ ++ G CR+G
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 167 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 226
L + ++L + + S N
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYN----------------------------------- 277
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
T+I G+C+ G AL+L N M K QPN+ +N+ I+G C+ A + E++
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 287 KLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
+ T T+NTLI+GYS G + AF +M G+ + +TYN LI LCK +A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 346 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 405
+ +K + + + P+ T++ LI + + + L+ MI G P+++T++ +V+
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 406 F 406
F
Sbjct: 458 F 458
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 4/305 (1%)
Query: 10 IKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 69
+ + +L+D CK + AL+V+K+M + PN V+Y+S+I G CK G L AE
Sbjct: 49 VVDTILIDTLCKNRLVVPALEVLKRMK---DRGISPNVVTYSSLITGLCKSGRLADAERR 105
Query: 70 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
L +M P+V T++ LID YA+ G L + + M++ + PN+ Y+S++Y L
Sbjct: 106 LHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCM 165
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
H ++EA K+L MI K P+ +Y+ L G ++ + + +KL + + + + + S
Sbjct: 166 HNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVS 225
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
N L+ ++ G M + GL P++ + V+ G G EKAL + M
Sbjct: 226 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ 285
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKLLDATTFNTLISGYSNSGQID 308
K ++ Y I+G+CK A +L +L+ KR D + +I+ + +G
Sbjct: 286 KTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRT 345
Query: 309 EAFGL 313
EA L
Sbjct: 346 EADAL 350
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 170/365 (46%), Gaps = 40/365 (10%)
Query: 43 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 102
+ P+ V+ +S++NGFC + A V G M K G + V LID + + +L
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 103 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
+ M +RG+ PN+V Y+S++ L + G + +A + L +M K I P+ +++ L +
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
+ G L++ ++ + + MI + P+V
Sbjct: 129 AKRGKLSK-------------VDSVYKM----------------------MIQMSIDPNV 153
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
+T +++I G C ++A+++ + MI PN+ Y++ NG K + D L+D+
Sbjct: 154 FTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDD 213
Query: 283 LRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
+ +R + T + NTLI GY +G+ID A G+ M S GL N +YN ++ L NG
Sbjct: 214 MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANG- 272
Query: 342 DEEAKELMKMMIMQGIRP--DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 399
E K L + MQ R D ITYT +I K +E L + K V PD K Y
Sbjct: 273 -EVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY 331
Query: 400 DAIVT 404
++
Sbjct: 332 TIMIA 336
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 1/234 (0%)
Query: 177 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG 236
+++K + D + + L+N C S G M G+ DV +ID CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 237 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFN 295
AL + M PN+ Y+S I GLCK A+ + E+ +K+ + TF+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 296 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 355
LI Y+ G++ + + M + + N TY++LI LC + +EA +++ +MI +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 356 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
G P+ +TY+TL F K ++ I L D M +GV + + + ++ + A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQA 236
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 164/370 (44%), Gaps = 37/370 (10%)
Query: 36 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 95
++M + PN+ ++N + N FC ++ L M + GFEP + TY TL+ Y R
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 96 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 155
G L+E+ L M R + P++V Y S++ L + G + EA + M+D+ I PD SY
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 156 AILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 215
L C+ G + ++ KL ++ M+
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHE-----------------------------------MLG 369
Query: 216 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
+ PD +T +++G + G A+ + ++ + + I LC+
Sbjct: 370 NSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFA 429
Query: 276 AKNLVDELRKRKLLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 333
AK+L+D + + + +A T+N LI S I+EA L ++K+ + TY LI
Sbjct: 430 AKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALI 489
Query: 334 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 393
LC+ G + EA+ LM M ++PD L+ + K+ ++ L ++ I
Sbjct: 490 GCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRI 549
Query: 394 PDQKTYDAIV 403
D ++Y+++V
Sbjct: 550 FDPESYNSLV 559
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 1/170 (0%)
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTL 297
E ++Y+ M ++ PN +N N C ++ + ++++ + D T+NTL
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 357
+S Y G++ EAF L M + + VTY +LI LCK+G EA + M+ +GI
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 358 RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
+PDC++Y TLI + K+ ++ L M+ V+PD+ T IV F+
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFV 387
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 39/228 (17%)
Query: 9 CIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 68
C+ L+ CK G + + K++ +M GNSV P+ + I+ GF ++G LL A
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEM---LGNSVVPDRFTCKVIVEGFVREGRLLSAVN 397
Query: 69 VLGDMVK------------------------------------AGFEPSVRTYATLIDGY 92
+ ++ + G E TY LI+
Sbjct: 398 FVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESL 457
Query: 93 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 152
+R ++EE+L L ++ + + Y +++ L R G EA ++++M D + PD
Sbjct: 458 SRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDS 517
Query: 153 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+ L G C+ +A +L + I D S N L+ +C++
Sbjct: 518 FICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCET 565
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 175/426 (41%), Gaps = 40/426 (9%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG--FEP 80
G + K + G P S +YNS+I ++G EV +M G F P
Sbjct: 173 GRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCF-P 231
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
TY+ LI Y + G + ++RL DEM + + P +Y ++L ++ G +E+A +
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+M P Y+Y L +GL + G + EA + +L+ L D LN L+N + K
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 201 XXXXXXXXXXGSM-ITRGLP-----------------------------------PDVYT 224
M + R P P +T
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+ +IDG CK EKAL L M + P Y S IN L K + A L EL+
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 285 KR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+ + + + +I + G++ EA L EMK+ G + YN L++ + K G
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
EA L++ M G R D ++ ++ F + P I + + + G+ PD TY+ ++
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL 591
Query: 404 TPFLLA 409
F A
Sbjct: 592 GCFAHA 597
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 179/392 (45%), Gaps = 5/392 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+ K G D A+++ +M N + P Y +++ + K G + A ++ +M
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMK---DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+AG P+V TY LI G + G ++E+ +M+ GL P++V N+++ L + G +
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRV 354
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRN-GYLTEALKLHNQILKFDLIEDAFSLNI 192
EE + V S+M P SY + + L + +++E +++ + F+ +I
Sbjct: 355 EELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSI 414
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L++ CK+ M +G PP ++I+ K E A L+ + +
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDEAF 311
+ +Y I K A +L +E++ + D +N L+SG +G I+EA
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
L +M+ G A+ ++N ++N + G A E+ + + GI+PD +TY TL+ F
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCF 594
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
EE + M KG D TY +I+
Sbjct: 595 AHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 137/312 (43%), Gaps = 40/312 (12%)
Query: 30 KVMKKMNLMTGNSVW---PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKA-GFEPSVRTY 85
+V + N+ + +W P VSYN++I + + D +KA PS TY
Sbjct: 353 RVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTY 412
Query: 86 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 145
+ LIDGY + +E++L L +EM E+G P Y S++ L + E A+++ ++ +
Sbjct: 413 SILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
Query: 146 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 205
YA++ + + G L+EA+ L N+
Sbjct: 473 NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE---------------------------- 504
Query: 206 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 265
M +G PDVY ++ G K G +A L M + + ++ +N +N
Sbjct: 505 -------MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Query: 266 GLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 324
G + A + + ++ + D T+NTL+ ++++G +EA + EMK G
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEY 617
Query: 325 NRVTYNTLINLL 336
+ +TY+++++ +
Sbjct: 618 DAITYSSILDAV 629
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 170/384 (44%), Gaps = 41/384 (10%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+ L C G + V + M G +PN + I+ C+ G + A +V+G M
Sbjct: 179 IALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLM 238
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI---------- 123
+ +G SV ++ L+ G+ R G ++++ L ++M++ G PN+V Y S+
Sbjct: 239 ICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMV 298
Query: 124 -------------------------LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
++ R G EEA KV + + + + PDQY++A +
Sbjct: 299 DEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASI 358
Query: 159 TEGLCRNGYLTEALKLHNQI-LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
LC +G ++ + I FDL+ N+L N K M +
Sbjct: 359 LSSLCLSGKFDLVPRITHGIGTDFDLVTG----NLLSNCFSKIGYNSYALKVLSIMSYKD 414
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
D YT + C+ G A+++Y +IK + + +++ I+ L ++ + A
Sbjct: 415 FALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAV 474
Query: 278 NLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+L + ++ LD ++ I G + +I+EA+ L +MK G+ NR TY T+I+ L
Sbjct: 475 HLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGL 534
Query: 337 CKNGCDEEAKELMKMMIMQGIRPD 360
CK E+ +++++ I +G+ D
Sbjct: 535 CKEKETEKVRKILRECIQEGVELD 558
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 148/341 (43%), Gaps = 9/341 (2%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A EV M GF P+ R ++D + + +L + + + R F + ++ +
Sbjct: 127 AIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDI---ALSH 183
Query: 126 WLYR--HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
+ R GD+ VL MI + P++ + + CR G ++EA ++ ++ +
Sbjct: 184 FCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGI 243
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
++L++ +S MI G P++ T ++I G LG ++A
Sbjct: 244 SVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFT 303
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYS 302
+ + + P++ + N I+ ++ + A+ + L KRKL+ D TF +++S
Sbjct: 304 VLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
SG+ D +T +G + VT N L N K G + A +++ +M + DC
Sbjct: 364 LSGKFDLVPRIT---HGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCY 420
Query: 363 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
TYT ++ + P I ++ +I + D + AI+
Sbjct: 421 TYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAII 461
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 298
+KA+ +Y GM PN N ++ K+ + A + + +R R +F+ +
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFF---SFDIAL 181
Query: 299 SGYSNSGQIDEAFGLTTEMKSL---GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 355
S + + G + G+ +K + G NR + ++ L C+ GC EA +++ +MI
Sbjct: 182 SHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS 241
Query: 356 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
GI ++ L++ F + P++ + L + MI G P+ TY +++ F+
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFV 293
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 61/121 (50%)
Query: 289 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
+ ++ L+SG+ SG+ +A L +M +G S N VTY +LI G +EA +
Sbjct: 245 VSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTV 304
Query: 349 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
+ + +G+ PD + +I + + EE + + + ++PDQ T+ +I++ L
Sbjct: 305 LSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCL 364
Query: 409 A 409
+
Sbjct: 365 S 365
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 176/394 (44%), Gaps = 4/394 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++D K+ SLDLA K M + P+ +YN +I+G CKKG + A ++ M
Sbjct: 185 AVIDALVKSNSLDLA---YLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM 241
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G P+V TY LIDG+ G ++E+L+ + M R L PN + ++ ++R
Sbjct: 242 EQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPP 301
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A +VL ++K + Y + L N E + +I + I D+ + N
Sbjct: 302 CKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAA 361
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ + K ++RG+ P ++ + R M
Sbjct: 362 MSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGL 421
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
++ YN+ I+ LCK + A + E++ R + + TFNT +SGYS G + + G
Sbjct: 422 LSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHG 481
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
+ ++ G + +T++ +IN LC+ ++A + K M+ GI P+ ITY LI
Sbjct: 482 VLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCC 541
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ + L M G+ PD Y+A + F
Sbjct: 542 STGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 181/421 (42%), Gaps = 39/421 (9%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G CK G +D A++++K+M GN PN +Y +I+GF G + A + L M
Sbjct: 220 ILIHGVCKKGVVDEAIRLVKQME-QEGNR--PNVFTYTILIDGFLIAGRVDEALKQLEMM 276
Query: 74 VKAGFEPSVRTYATLIDGYARW-----------GSLE----------------------- 99
P+ T T + G R G +E
Sbjct: 277 RVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMA 336
Query: 100 -ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
E+ + ++ ERG P+ +N+ + L + D+ E ++ + + + P Y +L
Sbjct: 337 KETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVL 396
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
+ L +E + Q+ L+ +S N +++ +CK+ M RG+
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI 456
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
P++ T T + G G+ +K + ++ +P++ ++ IN LC+ A +
Sbjct: 457 SPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFD 516
Query: 279 LVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
E+ + + + T+N LI ++G D + L +MK GLS + YN I C
Sbjct: 517 CFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFC 576
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
K ++A+EL+K M+ G++PD TY+TLI ++ E + + G +PD
Sbjct: 577 KMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSY 636
Query: 398 T 398
T
Sbjct: 637 T 637
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 135/302 (44%), Gaps = 2/302 (0%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+S ++N+ ++ K L+ + V G +P Y L+ E R
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
+M GL ++ YN+++ L + +E A+ L++M D+ I P+ ++ G
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G + + + ++L D + ++++N +C++ M+ G+ P+ T
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+I C G+T+++++L+ M + P+L YN+ I CKM A+ L+ +
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 285 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL-LCKNGCD 342
+ L D T++TLI S SG+ EA + + ++ G + T + L L K+G
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRKSGLS 652
Query: 343 EE 344
E
Sbjct: 653 RE 654
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 168/400 (42%), Gaps = 37/400 (9%)
Query: 41 NSVWPNSVSYNSII-NGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 99
+ V+ S S++ N +KG LLL+ E+L ++ +G+ S LI + R G +
Sbjct: 103 DPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAK 162
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
+ ++ G+ P+ +YN+++ L + ++ A M PD+++Y IL
Sbjct: 163 YCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILI 222
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
G+C+ G + EA++L Q+ + + F+ IL++ + M R L
Sbjct: 223 HGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLN 282
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
P+ T T + G + KA + G ++ D Y++ + L +
Sbjct: 283 PNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQF 342
Query: 280 VDELRKRKLL-DATTFNT-----------------------------------LISGYSN 303
+ ++ +R + D++TFN L+ N
Sbjct: 343 LRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLN 402
Query: 304 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
+ + E +M GL ++ +YN +I+ LCK E A + M +GI P+ +T
Sbjct: 403 AQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVT 462
Query: 364 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ T ++ ++ + ++V + + +++ G PD T+ I+
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 104/215 (48%), Gaps = 3/215 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++D CK ++ A + +M + PN V++N+ ++G+ +G + VL +
Sbjct: 430 AVIDCLCKARRIENAAMFLTEMQ---DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ GF+P V T++ +I+ R ++++ EM+E G+ PN + YN ++ GD
Sbjct: 487 LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ + K+ + M + + PD Y+Y + C+ + +A +L +L+ L D F+ + L
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
+ + +S S+ G PD YTK V
Sbjct: 607 IKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 152/372 (40%), Gaps = 36/372 (9%)
Query: 68 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 127
+V + G +PS R Y +ID + SL+ + +M G P+ YN +++ +
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 128 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 187
+ G ++EA +++ M + P+ ++Y IL +G G + EALK + L +
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 188 FSLNILLNYI------CKSXXXXXXXXXXGSMIT-------------------------- 215
++ ++ I CK+ S +
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 216 ---RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
RG PD T + K + + R+++G + +P Y + L
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQR 405
Query: 273 TDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
+ ++ LL + ++N +I + +I+ A TEM+ G+S N VT+NT
Sbjct: 406 FSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNT 465
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
++ G ++ +++ +++ G +PD IT++ +I + ++ M+ G
Sbjct: 466 FLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 525
Query: 392 VIPDQKTYDAIV 403
+ P++ TY+ ++
Sbjct: 526 IEPNEITYNILI 537
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 1/220 (0%)
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
N +++ + KS M + G PD +T +I G CK G ++A+RL M +
Sbjct: 184 NAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQ 243
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 309
+PN+ Y I+G D A ++ +R RKL + T T + G +
Sbjct: 244 EGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCK 303
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
AF + + RV Y+ ++ L N +E + ++ + +G PD T+ ++
Sbjct: 304 AFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMS 363
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
K H E + D + +GV P Y +V L A
Sbjct: 364 CLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNA 403
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 164/359 (45%), Gaps = 37/359 (10%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
N +N CK L AE +L D ++ G P V TY TLI GY R+ ++E+ + M E
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
G+ P++ YNS++ ++ + ++ +M+ + PD +SY L + G E
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 230
A K+ ++ + GL P + T ++D
Sbjct: 137 AFKILHEDIHLA----------------------------------GLVPGIDTYNILLD 162
Query: 231 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL- 289
CK G+T+ A+ L+ + K +P L YN INGLCK ++ EL+K
Sbjct: 163 ALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
+A T+ T++ Y + +I++ L +MK G + + +++ L K G EEA E M
Sbjct: 222 NAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECM 281
Query: 350 KMMIMQGIRP-DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
++ G R D ++Y TL+ + K + + V L + + +KG+ PD T+ IV L
Sbjct: 282 HELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLL 340
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 175/364 (48%), Gaps = 8/364 (2%)
Query: 43 VWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 102
V P+ ++YN++I G+ + G+ A V M +AG EP V TY +LI G A+ L L
Sbjct: 44 VLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVL 103
Query: 103 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID-KHICPDQYSYAILTEG 161
+L DEM+ GL P++ YN+++ ++ G EA K+L + I + P +Y IL +
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 162 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 221
LC++G+ A++L LK + + + NIL+N +CKS + G P+
Sbjct: 164 LCKSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPN 222
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
T T++ K EK L+L+ M K + + ++ L K + A +
Sbjct: 223 AVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMH 282
Query: 282 ELRKR--KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
EL + + D ++NTL++ Y G +D L E++ GL + T+ ++N L
Sbjct: 283 ELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNI 342
Query: 340 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 399
G A++ + + G++P +T LI K H + + L M ++ D+ TY
Sbjct: 343 GNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTY 398
Query: 400 DAIV 403
++V
Sbjct: 399 TSVV 402
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 41/294 (13%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LLD CK+G D A+++ K + + V P ++YN +ING CK + + ++ ++
Sbjct: 159 ILLDALCKSGHTDNAIELFKHLK----SRVKPELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K+G+ P+ TY T++ Y + +E+ L+L +M + G + +++ L + G
Sbjct: 215 KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRA 274
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EEA + + +++ R+G + +D S N L
Sbjct: 275 EEAYECMHELV-------------------RSGTRS---------------QDIVSYNTL 300
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
LN K + +GL PD YT +++G +GNT A + + +M
Sbjct: 301 LNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGM 360
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQI 307
QP++ N I+GLCK D A L + R D T+ +++ G++
Sbjct: 361 QPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR---DEFTYTSVVHNLCKDGRL 411
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 147/364 (40%), Gaps = 46/364 (12%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G + +D A V ++M + P+ +YNS+I+G K L ++ +M+
Sbjct: 54 LIKGYTRFIGIDEAYAVTRRMR---EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEML 110
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE-RGLFPNIVVYNSILYWLYRHGDM 133
+G P + +Y TL+ Y + G E+ ++ E + GL P I YN +L L + G
Sbjct: 111 HSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHT 170
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A ++ + + + P+ +Y IL GLC++ + + ++ K +A + +
Sbjct: 171 DNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTM 229
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
L K+ M G D + V+ K G E+A + +++
Sbjct: 230 LKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGT 289
Query: 254 QP-NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL----------------------- 289
+ ++ YN+ +N K + D +L++E+ + L
Sbjct: 290 RSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAE 349
Query: 290 -------------DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
T N LI G +G +D A L M+ + TY ++++ L
Sbjct: 350 KHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEV----RDEFTYTSVVHNL 405
Query: 337 CKNG 340
CK+G
Sbjct: 406 CKDG 409
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL+ K G+LD +++++ + + P+ ++ I+NG G AE+ L +
Sbjct: 300 LLNLYFKDGNLDAVDDLLEEIEM---KGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIG 356
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G +PSV T LIDG + G ++ ++RL M R F Y S+++ L + G +
Sbjct: 357 EMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEF----TYTSVVHNLCKDGRLV 412
Query: 135 EASKVLSDMIDKHI-CPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
ASK+L +K + P A+L+ G+ A K H +I
Sbjct: 413 CASKLLLSCYNKGMKIPSSARRAVLS-GIRETVSYQAARKTHIKI 456
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 168/389 (43%), Gaps = 49/389 (12%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G CK +D A ++ K M L N P+ V+YN+II+G C+ G + +A VL M+
Sbjct: 215 LINGFCKNSMVDEAFRIFKDMELYHCN---PDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 75 KAG--FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
K P+V +Y TL+ GY ++E++ + +M+ RGL PN V YN+++ L
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 133 MEEASKVLSDMIDKH--ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
+E +L D PD ++ IL + C G+L A+K+ +
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE------------- 378
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
M+ L PD + + +I C ++A L+N + +
Sbjct: 379 ----------------------MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416
Query: 251 M------DE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSN 303
DE +P YN LC T A+ + +L KR + D ++ TLI+G+
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCR 476
Query: 304 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
G+ A+ L M + TY LI+ L K G A + ++ M+ P T
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATT 536
Query: 364 YTTLITHFNKKHHPEEVIALHDYMILKGV 392
+ +++ K+ E L M+ K +
Sbjct: 537 FHSVLAELAKRKFANESFCLVTLMLEKRI 565
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 167/369 (45%), Gaps = 49/369 (13%)
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
R + +LI Y G +ES++L M + G+ P+++ +NS+L L + G A + +
Sbjct: 139 RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDE 198
Query: 143 MIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 201
M + + PD Y++ L G C+N + EA ++ + + D + N +++ +C++
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 202 XXXXXXXXXGSMITRG--LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
M+ + + P+V + T++ G C ++A+ +++ M+ +PN
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 260 YNSFINGLCKMASTDVAKNLV---DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTE 316
YN+ I GL + D K+++ ++ DA TFN LI + ++G +D A + E
Sbjct: 319 YNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 378
Query: 317 MKSLGLSANRVTYNTLIN------------------------------------------ 334
M ++ L + +Y+ LI
Sbjct: 379 MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE 438
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
LC NG ++A+++ + ++ +G++ D +Y TLIT ++ + L M+ + +P
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVP 497
Query: 395 DQKTYDAIV 403
D +TY+ ++
Sbjct: 498 DLETYELLI 506
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 156/365 (42%), Gaps = 33/365 (9%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ C G LD A+KV ++M M + P+S SY+ +I C + AE + ++
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNM---KLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 74 V-------KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 126
K +P Y + + G +++ ++ ++++RG+ + Y +++
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITG 473
Query: 127 LYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN---QILKFDL 183
R G + A ++L M+ + PD +Y +L +GL + G EAL H+ ++L+
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG---EALLAHDTLQRMLRSSY 530
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA-- 241
+ A + + +L + K M+ + + ++ V+ EKA
Sbjct: 531 LPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFL 590
Query: 242 -LRLY--NG-MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNT 296
+RL NG ++KM+E + LC+ A LV L K +++D T NT
Sbjct: 591 IVRLLYDNGYLVKMEE---------LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNT 641
Query: 297 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
+I G + EAF L E+ LG + L N L G EE + + K M
Sbjct: 642 VIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATLR 701
Query: 357 IRPDC 361
DC
Sbjct: 702 ESDDC 706
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 267 LCKMASTDVAKNLVDELRKR-----KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
L + + +VA+N + + +R KL D FN+LI Y N+G E+ L MK +G
Sbjct: 110 LGRARNLNVARNFLFSIERRSNGCVKLQD-RYFNSLIRSYGNAGLFQESVKLFQTMKQMG 168
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELM-KMMIMQGIRPDCITYTTLITHFNKKHHPEEV 380
+S + +T+N+L+++L K G A +L +M G+ PD T+ TLI F K +E
Sbjct: 169 ISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEA 228
Query: 381 IALHDYMILKGVIPDQKTYDAIV 403
+ M L PD TY+ I+
Sbjct: 229 FRIFKDMELYHCNPDVVTYNTII 251
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 130/252 (51%), Gaps = 1/252 (0%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + V P+ ++N+++NG+CK G ++ A++ + +++AG +P TY + I G+ R
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKE 205
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++ + ++ EM + G N V Y ++Y L+ ++EA +L M D + CP+ +Y +
Sbjct: 206 VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTV 265
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L + LC +G +EA+ L Q+ + + D +L+ C M+ G
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
L P+V T +I G CK N KA+ L + M++ + P+L YN+ I G C + D A
Sbjct: 326 LMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAY 384
Query: 278 NLVDELRKRKLL 289
L+ + + L+
Sbjct: 385 RLLSLMEESGLV 396
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M+ + PD+YT T+++G CKLG +A + +I+ P+ Y SFI G C+
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKE 205
Query: 273 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
D A + E+ + + ++ LI G + +IDEA L +MK N TY
Sbjct: 206 VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTV 265
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
LI+ LC +G EA L K M GI+PD YT LI F +E L ++M+ G
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Query: 392 VIPDQKTYDAIVTPF 406
++P+ TY+A++ F
Sbjct: 326 LMPNVITYNALIKGF 340
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 8/283 (2%)
Query: 120 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 179
YN++L L R G +EE ++ ++M++ + PD Y++ L G C+ GY+ EA + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 180 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 239
+ D F+ + C+ M G + + +I G + +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 240 KALRLYNGMIKMDEQ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFN 295
+AL L ++KM + PN+ Y I+ LC A NL ++ + + D +
Sbjct: 243 EALSL---LVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYT 299
Query: 296 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 355
LI + + +DEA GL M GL N +TYN LI CK +A L+ M+ Q
Sbjct: 300 VLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQ 358
Query: 356 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
+ PD ITY TLI + + L M G++P+Q+T
Sbjct: 359 NLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 136/291 (46%), Gaps = 2/291 (0%)
Query: 71 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
GD + ++ + + Y L+ AR+G +EE RL EM+E + P+I +N+++ +
Sbjct: 109 GDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKL 168
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
G + EA + ++ +I PD ++Y G CR + A K+ ++ + + S
Sbjct: 169 GYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSY 228
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
L+ + ++ M P+V T +ID C G +A+ L+ M +
Sbjct: 229 TQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSE 288
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 309
+P+ +Y I C + D A L++ + + L+ + T+N LI G+ + +
Sbjct: 289 SGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHK 347
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 360
A GL ++M L + +TYNTLI C +G + A L+ +M G+ P+
Sbjct: 348 AMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 2/250 (0%)
Query: 155 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
Y L L R G + E +L+ ++L+ + D ++ N L+N CK +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
G PD +T + I G+C+ + A +++ M + N Y I GL + D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 275 VAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 333
A +L+ +++ + T+ LI SGQ EA L +M G+ + Y LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 334 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 393
C +EA L++ M+ G+ P+ ITY LI F KK + + + L M+ + ++
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLV 361
Query: 394 PDQKTYDAIV 403
PD TY+ ++
Sbjct: 362 PDLITYNTLI 371
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 1 MTLIGSGGCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIING 56
+T + GC ++ + G C+ +D A KV K+ MT N N VSY +I G
Sbjct: 178 VTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKE---MTQNGCHRNEVSYTQLIYG 234
Query: 57 FCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN 116
+ + A +L M P+VRTY LID G E++ L +M E G+ P+
Sbjct: 235 LFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPD 294
Query: 117 IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN 176
+Y ++ ++EAS +L M++ + P+ +Y L +G C+ + +A+ L +
Sbjct: 295 DCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLS 353
Query: 177 QILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
++L+ +L+ D + N L+ C S M GL P+ T
Sbjct: 354 KMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 281 DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
D + L +N L+S + G ++E L TEM +S + T+NTL+N CK G
Sbjct: 110 DSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLG 169
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 400
EAK+ + +I G PD TYT+ IT ++ + + M G ++ +Y
Sbjct: 170 YVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 401 AIV 403
++
Sbjct: 230 QLI 232
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 188/407 (46%), Gaps = 39/407 (9%)
Query: 39 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 98
+G + + S ++NG ++G A + +++ G +PS+ TY TL+ R
Sbjct: 311 SGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHF 370
Query: 99 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
L L ++ + GL P+ +++N+I+ G++++A K+ M + P ++ L
Sbjct: 371 HSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTL 430
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+G + G L E+ +L + +L+ ++++ + + NIL+ C M + G
Sbjct: 431 IKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG 490
Query: 218 LPPDVYT-----KA-------------------------------TVIDGNCKLGNTEKA 241
+ PDV T KA T+++G C+ G E+A
Sbjct: 491 VKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Query: 242 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISG 300
LR + M ++ PNL ++NS I G + D +VD + + + D TF+TL++
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA 610
Query: 301 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 360
+S+ G + + T+M G+ + ++ L + G E+A++++ M G+RP+
Sbjct: 611 WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Query: 361 CITYTTLITHFNKKHHPEEVIALHDYMI-LKGVIPDQKTYDAIVTPF 406
+ YT +I+ + ++ + ++ M + G+ P+ TY+ ++ F
Sbjct: 671 VVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF 717
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 180/398 (45%), Gaps = 39/398 (9%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+ ++Y +++ ++ ++ + K G +P + +I+ + G+L++++++
Sbjct: 352 PSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 411
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI-DKHICPDQYSYAILTEGLC 163
++M E G P +N+++ + G +EE+S++L M+ D+ + P+ + IL + C
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLN-YICKSXXXXXXXXXXGSMITRGLPPDV 222
+ EA + ++ + + D + N L Y M+ + P+V
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
T T+++G C+ G E+ALR + M ++ PNL ++NS I G + D +VD
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 283 LRKRKL-LDATTFNTLIS-----------------------------------GYSNSGQ 306
+ + + D TF+TL++ GY+ +G+
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI-MQGIRPDCITYT 365
++A + +M+ G+ N V Y +I+ C G ++A ++ K M + G+ P+ TY
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYE 711
Query: 366 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
TLI F + P + L M K V+P +KT I
Sbjct: 712 TLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIA 749
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 170/350 (48%), Gaps = 7/350 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+++ + ++G+LD A+K+ +KM + P + ++N++I G+ K G L + +L M
Sbjct: 394 AIINASSESGNLDQAMKIFEKMK---ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 74 VKAG-FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
++ +P+ RT L+ + +EE+ + +M G+ P++V +N++ R G
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 133 MEEASK-VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
A ++ M+ + P+ + + G C G + EAL+ ++ + + + F N
Sbjct: 511 TCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
L+ M G+ PDV T +T+++ +G+ ++ +Y M++
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 630
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 310
P++ ++ G + + A+ +++++RK + + + +ISG+ ++G++ +A
Sbjct: 631 GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
Query: 311 FGLTTEMKSL-GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
+ +M + GLS N TY TLI + +A+EL+K M + + P
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 138/299 (46%), Gaps = 11/299 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE-VLGD 72
+L+ C ++ A ++ KM V P+ V++N++ + + G AE+ ++
Sbjct: 465 ILVQAWCNQRKIEEAWNIVYKMQ---SYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPR 521
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M+ +P+VRT T+++GY G +EE+LR M E G+ PN+ V+NS++ D
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
M+ +V+ M + + PD +++ L G + +++ +L+ + D + +I
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM- 251
L ++ M G+ P+V +I G C G +KA+++Y M +
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLIS------GYSNS 304
PNLT Y + I G + A+ L+ ++ + ++ LI+ G SNS
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSNS 760
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 196/437 (44%), Gaps = 43/437 (9%)
Query: 8 GCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 67
G + LL K G AL V+K+M NS +SV+YN ++ + + G A
Sbjct: 315 GTVTYNALLQVFGKAGVYTEALSVLKEME---ENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 68 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 127
V+ M K G P+ TY T+ID Y + G +E+L+L M E G PN YN++L L
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Query: 128 YRHGDMEEASKVLSDM-----------------------IDKHI---------C---PDQ 152
+ E K+L DM +DK + C PD+
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR 491
Query: 153 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 212
++ L R G +A K++ ++ + + N LLN + +
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI--NGLCK- 269
M ++G P + + ++ K GN R+ N + + P+ + + + N C+
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 270 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 329
+A ++ A L + + D FN+++S ++ + D+A G+ ++ GLS + VTY
Sbjct: 612 LAGSERAFTLFKKHGYKP--DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 330 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 389
N+L+++ + G +A+E++K + ++PD ++Y T+I F ++ +E + + M
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729
Query: 390 KGVIPDQKTYDAIVTPF 406
+G+ P TY+ V+ +
Sbjct: 730 RGIRPCIFTYNTFVSGY 746
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 163/375 (43%), Gaps = 40/375 (10%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M N PN ++N+++ KG V +M GFEP T+ TLI Y R GS
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++ ++ EM G + YN++L L R GD V+SDM K P + SY++
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL--NYICKSXXXXXXXXXXGSMIT 215
+ + + G ++ N+I + + L LL N+ C++
Sbjct: 567 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA--------------- 611
Query: 216 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
L +E+A L+ K +P++ I+NS ++ + D
Sbjct: 612 -------------------LAGSERAFTLFK---KHGYKPDMVIFNSMLSIFTRNNMYDQ 649
Query: 276 AKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
A+ +++ +R+ L D T+N+L+ Y G+ +A + ++ L + V+YNT+I
Sbjct: 650 AEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIK 709
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
C+ G +EA ++ M +GIRP TY T ++ + E+ + + M P
Sbjct: 710 GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRP 769
Query: 395 DQKTYDAIVTPFLLA 409
++ T+ +V + A
Sbjct: 770 NELTFKMVVDGYCRA 784
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 138/324 (42%), Gaps = 2/324 (0%)
Query: 82 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG-DMEEASKVL 140
VR Y T++ Y+R G E+++ L + M E G P +V YN IL + G + VL
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 269
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+M K + D+++ + + R G L EA + ++ + N LL K+
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M P D T ++ + G +++A + M K PN Y
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY 389
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKS 319
+ I+ K D A L +++ + T T+N ++S + +E + +MKS
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS 449
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
G S NR T+NT++ L G D+ + + M G PD T+ TLI+ + + +
Sbjct: 450 NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD 509
Query: 380 VIALHDYMILKGVIPDQKTYDAIV 403
++ M G TY+A++
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALL 533
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+ V+YNS+++ + ++G AEE+L + K+ +P + +Y T+I G+ R G ++E++R+
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
EM ERG+ P I YN+ + G E V+ M P++ ++ ++ +G CR
Sbjct: 724 LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNIL 193
G +EA+ ++I FD D S+ L
Sbjct: 784 AGKYSEAMDFVSKIKTFDPCFDDQSIQRL 812
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 130/275 (47%), Gaps = 3/275 (1%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
+YN+++N +KG E V+ DM GF+P+ +Y+ ++ YA+ G+ R+ +
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR 586
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH-ICPDQYSYAILTEGLCRNG 166
+ E +FP+ ++ ++L ++ + + + + + KH PD + + RN
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT-LFKKHGYKPDMVIFNSMLSIFTRNN 645
Query: 167 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 226
+A + I + L D + N L++ + ++ L PD+ +
Sbjct: 646 MYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
TVI G C+ G ++A+R+ + M + +P + YN+F++G M +++++ + K
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765
Query: 287 KLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
+ TF ++ GY +G+ EA +++K+
Sbjct: 766 DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTF 800
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/404 (19%), Positives = 167/404 (41%), Gaps = 48/404 (11%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P +V+YN+++ F K G A VL +M + TY L+ Y R G +E+ +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
+ M ++G+ PN + Y +++ + G +EA K+ M + P+ +Y + L +
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
E +K+ + + + N +L M + G PD T
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
T+I + G+ A ++Y M + +T YN+ +N L + +N++ +++
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 285 KRKLLDA-TTFNTLISGYS---------------NSGQI--------------------- 307
+ T+++ ++ Y+ GQI
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALA 613
Query: 308 --DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 365
+ AF L K G + V +N+++++ +N ++A+ +++ + G+ PD +TY
Sbjct: 614 GSERAFTL---FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 366 TLITHFNKKHH---PEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+L+ + ++ EE++ + LK PD +Y+ ++ F
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLK---PDLVSYNTVIKGF 711
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA-STDVAKNL 279
DV T++ + G EKA+ L+ M +M P L YN ++ KM S +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 280 VDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
+DE+R + L D T +T++S + G + EA E+KS G VTYN L+ + K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
G EA ++K M D +TY L+ + + +E + + M KGV+P+ T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 399 YDAIVTPF 406
Y ++ +
Sbjct: 389 YTTVIDAY 396
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 181/383 (47%), Gaps = 40/383 (10%)
Query: 26 DLALKVMKKMNLMTG-NSVWPNSVSYNSIINGFCKKGGLLLAEEVL-GDMVKAGFEPSVR 83
DL KVM+ NL+ V P+ + ++ +N G + L+ ++L G +P+
Sbjct: 138 DLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTC 197
Query: 84 TYATLIDGYARWGSLEESLRLCDEMVERGL-FPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+ L+ + + G + + + +EM G+ +PN + Y++++ L+ H +EA ++ D
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 143 MIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 201
MI K I PD ++ ++ G CR G + A K IL F
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKK----ILDF-------------------- 293
Query: 202 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 261
M G P+VY + +++G CK+G ++A + ++ + K + + Y
Sbjct: 294 -----------MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYT 342
Query: 262 SFINGLCKMASTDVAKNLVDELR-KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
+ +N C+ TD A L+ E++ R D T+N ++ G S+ G+ +EA + + S
Sbjct: 343 TLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSE 402
Query: 321 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 380
G+ N+ +Y ++N LC NG E+A + + +M +GI P T+ L+ + + E
Sbjct: 403 GVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIG 462
Query: 381 IALHDYMILKGVIPDQKTYDAIV 403
+ + + G+IP K++ A+V
Sbjct: 463 VRVLIGFLRIGLIPGPKSWGAVV 485
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 125/248 (50%)
Query: 36 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 95
++++ + P+ V++N +INGFC+ G + A+++L M K G P+V Y+ L++G+ +
Sbjct: 257 DMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKV 316
Query: 96 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 155
G ++E+ + DE+ + GL + V Y +++ R+G+ +EA K+L +M D +Y
Sbjct: 317 GKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTY 376
Query: 156 AILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT 215
++ GL G EAL++ +Q + + S I+LN +C + M
Sbjct: 377 NVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSE 436
Query: 216 RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
RG+ P T ++ C+ G TE +R+ G +++ P + + + +CK
Sbjct: 437 RGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVH 496
Query: 276 AKNLVDEL 283
L+D L
Sbjct: 497 VFELLDSL 504
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 172/373 (46%), Gaps = 46/373 (12%)
Query: 22 TGSLDLALKVM--KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
+G ++L+ K++ K NL + PN+ +N ++ CK G + A V+ +M ++G
Sbjct: 173 SGEVNLSRKLLLYAKHNL----GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGIS 228
Query: 80 -PSVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSILYWLYRHGDMEEAS 137
P+ TY+TL+D +E++ L ++M+ + G+ P+ V +N ++ R G++E A
Sbjct: 229 YPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAK 288
Query: 138 KVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 196
K+L D + K+ C P+ Y+Y+ L G C+ G + EA + +++ K L D L+N
Sbjct: 289 KIL-DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 197 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 256
C++ G T++A++L M + +
Sbjct: 348 FCRN-----------------------------------GETDEAMKLLGEMKASRCRAD 372
Query: 257 LTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTT 315
YN + GL ++ A ++D+ + L+ ++ +++ +G++++A +
Sbjct: 373 TLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLS 432
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
M G+ + T+N L+ LC++G E ++ + G+ P ++ ++ K+
Sbjct: 433 VMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKER 492
Query: 376 HPEEVIALHDYMI 388
V L D ++
Sbjct: 493 KLVHVFELLDSLV 505
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V+++G C+ G ++ A K++ + M N PN +Y++++NGFCK G + A++ ++
Sbjct: 273 VMINGFCRAGEVERAKKIL---DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV 329
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G + Y TL++ + R G +E+++L EM + + YN IL L G
Sbjct: 330 KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRS 389
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EEA ++L + + ++ SY I+ LC NG L +A+K + + + + + N L
Sbjct: 390 EEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNEL 449
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCK 234
+ +C+S + GL P + V++ CK
Sbjct: 450 VVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 148/342 (43%), Gaps = 21/342 (6%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF + TY+ L+D R + D ++ + + S+ L RH
Sbjct: 82 QKGFNHNNATYSVLLDNLVR----HKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRS 137
Query: 135 EASKVLSDMID-----KHICPDQYSYAILTEGLCRNGYLTEALKL-----HNQILKFDLI 184
+ + +M + + P + + L +G + + KL HN L
Sbjct: 138 DLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHN----LGLQ 193
Query: 185 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP-PDVYTKATVIDGNCKLGNTEKALR 243
+ NIL+ + CK+ M G+ P+ T +T++D +++A+
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 244 LYNGMI-KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGY 301
L+ MI K P+ +N ING C+ + AK ++D ++K + ++ L++G+
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 302 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 361
G+I EA E+K GL + V Y TL+N C+NG +EA +L+ M R D
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADT 373
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+TY ++ + + EE + + D +GV ++ +Y I+
Sbjct: 374 LTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIIL 415
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL--DATTFNTLISGYSNSGQIDEAF 311
QPN I+N + CK + A +V+E+++ + ++ T++TL+ + EA
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 312 GLTTEMKSL-GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
L +M S G+S + VT+N +IN C+ G E AK+++ M G P+ Y+ L+
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
F K +E D + G+ D Y ++ F
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 10/337 (2%)
Query: 75 KAGFEPSVRTYATLIDGYARW--GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
+ F P T+ L+ R S+ R+ + MV GL P+ V + + L G
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK-FDLIEDAFSLN 191
++EA ++ ++ +KH PD Y+Y L + LC+ L + +++ FD+ D S
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
IL++ +C S + G PD + T++ G C L +A+ +Y M +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 252 DEQPNLTIYNSFINGLCKMASTDVA----KNLVDELRKRKLLDATTFNTLISGYSNSGQI 307
+P+ YN+ I GL K + A K +VD + D T+ +L++G G+
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP---DTATYTSLMNGMCRKGES 351
Query: 308 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
A L EM++ G + N TYNTL++ LCK ++ EL +MM G++ + Y TL
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL 411
Query: 368 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+ K E + DY + + D Y + T
Sbjct: 412 VRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLET 448
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 45/325 (13%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C+TG +D A +MK++ T P++ +YN ++ CK L + E + +M + F+
Sbjct: 170 CETGRVDEAKDLMKEL---TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-RDDFD 225
Query: 80 --PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 137
P + ++ LID +L E++ L ++ G P+ +YN+I+ EA
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 138 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 197
V M ++ + PDQ +Y L GL + G + EA LK
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA----RMYLK----------------- 324
Query: 198 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 257
+M+ G PD T ++++G C+ G + AL L M PN
Sbjct: 325 --------------TMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPND 370
Query: 258 TIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA---FGL 313
YN+ ++GLCK D L + ++ + L++ + TL+ SG++ EA F
Sbjct: 371 CTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDY 430
Query: 314 TTEMKSLGLSANRVTYNTLINLLCK 338
+ KSL ++ T T + L K
Sbjct: 431 AVDSKSLSDASAYSTLETTLKWLKK 455
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 2/249 (0%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL CK L + + + +M V P+ VS+ +I+ C L A ++ +
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMR--DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
AGF+P Y T++ G+ E++ + +M E G+ P+ + YN++++ L + G +E
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA L M+D PD +Y L G+CR G AL L ++ + + N LL
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL 377
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ +CK+ M + G+ + AT++ K G +A +++ +
Sbjct: 378 HGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSL 437
Query: 255 PNLTIYNSF 263
+ + Y++
Sbjct: 438 SDASAYSTL 446
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 9 CIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 68
C ++ G C A+ V KKM V P+ ++YN++I G K G + A
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMK---EEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
L MV AG+EP TY +L++G R G +L L +EM RG PN YN++L+ L
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC 381
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
+ M++ ++ M + + YA L L ++G + EA ++ + + + DA
Sbjct: 382 KARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDAS 441
Query: 189 SLNIL 193
+ + L
Sbjct: 442 AYSTL 446
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 187/424 (44%), Gaps = 34/424 (8%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ CK ++ +A+++ +M S + +N++I+GF K G L + M+
Sbjct: 278 LMKEYCKDNNMTMAMRLYLRM---VERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMI 334
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRL-CDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G + +V TY +I Y + G+++ +LRL + + N+ Y ++++ Y+ G M
Sbjct: 335 KKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGM 394
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL------KFDLIED- 186
++A +L M+D I PD +Y +L + L + L A+ + IL +I+D
Sbjct: 395 DKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL 454
Query: 187 ----------------------AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
A L ++ +C M+ G P ++
Sbjct: 455 GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFS 514
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+VI + E L N + ++D P++ Y +N LCK D A ++D +
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAME 574
Query: 285 KRKLLDATT-FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+ L ++++I G++ EA +M G+ + + Y +IN +NG +
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
EA EL++ ++ +RP TYT LI+ F K E+ D M+ G+ P+ Y A++
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 404 TPFL 407
FL
Sbjct: 695 GHFL 698
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 180/413 (43%), Gaps = 41/413 (9%)
Query: 29 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 88
+ + ++ M P SYNS+I ++ + ++ + + F P V TY +
Sbjct: 494 IAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIV 553
Query: 89 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 148
++ + + + + D M E GL P + +Y+SI+ L + G + EA + + M++ I
Sbjct: 554 VNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGI 613
Query: 149 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 208
PD+ +Y I+ RNG + EA +L +++K L +F+ +L++ K
Sbjct: 614 QPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQ 673
Query: 209 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 268
M+ GL P+V +I K G+ + + L+ M + D + + Y + ++GL
Sbjct: 674 YLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLW 733
Query: 269 KMASTDVAKNLVDELRKRKLLD-------------------ATTF--------------- 294
+ + + ++ E K KLL + +F
Sbjct: 734 RAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPN 793
Query: 295 ----NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 350
NT+I+GY +G++DEA+ M+ G+ N VTY L+ + G E A +L +
Sbjct: 794 LYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE 853
Query: 351 MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
PD + Y+TL+ P + +AL M G+ P++ +Y+ ++
Sbjct: 854 ---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLL 903
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 22/365 (6%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + + P+ ++Y +IN + + G + A E++ ++VK PS TY LI G+ + G
Sbjct: 608 MLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGM 667
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+E+ + D+M+E GL PN+V+Y +++ + GD + + + M + I D +Y
Sbjct: 668 MEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYIT 727
Query: 158 LTEGLCRNGYLTEALKLHNQIL----KFDLIEDAFSLNILL-------NYICKSXXXXXX 206
L GL R A K Q++ K L++ L+ NY KS
Sbjct: 728 LLSGLWR----AMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVI 783
Query: 207 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 266
S+I P++Y T+I G C G ++A M K PNL Y +
Sbjct: 784 GKVKKSII-----PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS 838
Query: 267 LCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANR 326
+ + A +L + D ++TL+ G + + +A L EM+ G++ N+
Sbjct: 839 HIEAGDIESAIDLFEGTNCEP--DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNK 896
Query: 327 VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDY 386
+Y L+ LC + EA +++K M I P I +T LI ++ E AL
Sbjct: 897 DSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAI 956
Query: 387 MILKG 391
M+ G
Sbjct: 957 MVQSG 961
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 162/392 (41%), Gaps = 12/392 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS-YNSIINGFCKKGGLLLAEEVLGDM 73
L G C G L+ A+ ++ + + G + P V+ Y S+ FCK+G AE + M
Sbjct: 207 LFKGLCGHGHLNEAIGML---DTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHM 263
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G+ Y L+ Y + ++ ++RL MVER + ++N++++ + G +
Sbjct: 264 EVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGML 323
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH-NQILKFDLIEDAFSLNI 192
++ + S MI K + + ++Y I+ C+ G + AL+L N D+ +
Sbjct: 324 DKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTN 383
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L+ K M+ G+ PD T ++ K + A+ + ++
Sbjct: 384 LIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAF 311
N + + N K+ S L+ E+ RK L A + + + A
Sbjct: 444 CGINPPVIDDLGNIEVKVES------LLGEIARKDANLAAVGLAVVTTALCSQRNYIAAL 497
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+M +LG + +YN++I L + E+ L+ ++ PD TY ++
Sbjct: 498 SRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNEL 557
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
KK+ + A+ D M G+ P Y +I+
Sbjct: 558 CKKNDRDAAFAIIDAMEELGLRPTVAIYSSII 589
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 127/321 (39%), Gaps = 8/321 (2%)
Query: 40 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 99
GN + P+S +S++ K A L ++ +G+ PS + + ++D
Sbjct: 124 GNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFL 183
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS-YAIL 158
E+ +++ ERG + + L HG + EA +L + P + Y L
Sbjct: 184 EAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSL 243
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
C+ G EA L + + D L+ CK M+ R
Sbjct: 244 FYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSF 303
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
D T+I G KLG +K +++ MIK Q N+ Y+ I CK + D A
Sbjct: 304 ELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALR 363
Query: 279 L-VDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L V+ + + + LI G+ G +D+A L M G+ + +TY L+ +L
Sbjct: 364 LFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKML 423
Query: 337 CKNGCDEEAKELMKMMIMQGI 357
K C E M+I+Q I
Sbjct: 424 PK--CHELK---YAMVILQSI 439
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 145/326 (44%), Gaps = 3/326 (0%)
Query: 16 LDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK 75
+D C+ +D AL M + PN YN+++NG+ K G + A M K
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGK--PNVGVYNTVVNGYVKSGDMDKALRFYQRMGK 221
Query: 76 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
+P V T+ LI+GY R + +L L EM E+G PN+V +N+++ G +EE
Sbjct: 222 ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE 281
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
K+ +MI+ + + IL +GLCR G + +A L +L ++ F L+
Sbjct: 282 GVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+C + +G P T+++G K G TEKA M+ P
Sbjct: 342 KLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILP 401
Query: 256 NLTIYNSFINGLCKM-ASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLT 314
+ +N + LC STD + + K D TT++ L+SG++ G+ E L
Sbjct: 402 DSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLV 461
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNG 340
EM + + TYN L++ L G
Sbjct: 462 NEMLDKDMLPDIFTYNRLMDGLSCTG 487
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 6/323 (1%)
Query: 85 YATLIDGYARWGSLEESLRLCDEMVERGLF---PNIVVYNSILYWLYRHGDMEEASKVLS 141
+ + ID Y R ++ +L D M + L PN+ VYN+++ + GDM++A +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 142 DMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSX 201
M + PD ++ IL G CR+ AL L ++ + + S N L+ S
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 202 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 261
MI G T ++DG C+ G + A L ++ P+ Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 262 SFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
S + LC A +++EL K+ TL+ G SG+ ++A G +M +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 321 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 380
G+ + VT+N L+ LC + +A L + +G PD TY L++ F K+ +E
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 381 IALHDYMILKGVIPDQKTYDAIV 403
L + M+ K ++PD TY+ ++
Sbjct: 458 EVLVNEMLDKDMLPDIFTYNRLM 480
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 121/254 (47%), Gaps = 3/254 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L++G C++ DLAL + ++M PN VS+N++I GF G + ++ +M
Sbjct: 233 ILINGYCRSSKFDLALDLFREMK---EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEM 289
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++ G S T L+DG R G ++++ L +++ + + P+ Y S++ L
Sbjct: 290 IELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKA 349
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A +++ ++ K P + L EGL ++G +A +++ ++ D+ + N+L
Sbjct: 350 VRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLL 409
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
L +C S ++G PD T ++ G K G ++ L N M+ D
Sbjct: 410 LRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDM 469
Query: 254 QPNLTIYNSFINGL 267
P++ YN ++GL
Sbjct: 470 LPDIFTYNRLMDGL 483
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 150 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 209
P+ Y + G ++G + +AL+ + ++ K D + NIL+N C+S
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 210 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
M +G P+V + T+I G G E+ +++ MI++ + + ++GLC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 270 MASTDVAKNLV-DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 328
D A LV D L KR L + +L+ + A + E+ G + +
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 329 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 388
TL+ L K+G E+A M+ M+ GI PD +T+ L+ H + L
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 389 LKGVIPDQKTYDAIVTPF 406
KG PD+ TY +V+ F
Sbjct: 431 SKGYEPDETTYHVLVSGF 448
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 151/330 (45%), Gaps = 5/330 (1%)
Query: 13 WVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 72
W++ + +L + + N M + P + +++ C K + A+E G
Sbjct: 142 WIVFRAYSRA---NLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK 198
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
G PS +TY+ L+ G+AR + ++ DEM+ER +++ YN++L L + GD
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
++ K+ +M + + PD YS+AI C G + A K+ +++ ++DL+ + ++ N
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
++ +CK+ MI +G PD +T +++ +C +A +L + M +
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD-ATTFNTLISG-YSNSGQIDEA 310
P+ YN + L ++ D A + + + +RK T+ +I G G+++EA
Sbjct: 379 CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEA 438
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
M G+ T L N L G
Sbjct: 439 CRYFEMMIDEGIPPYSTTVEMLRNRLVGWG 468
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 148/323 (45%), Gaps = 2/323 (0%)
Query: 78 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 137
FE S + + + Y+R E+ R + MVE G+ P + + +L+ L + A
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 138 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 197
+ I P +Y+IL G R + A K+ +++L+ + + D + N LL+ +
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 198 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 257
CKS M GL PD Y+ A I C G+ A ++ + M + D PN+
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 258 TIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTE 316
+N I LCK D A L+DE+ +K D T+N++++ + + +++ A L +
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF-NKKH 375
M +R TYN ++ LL + G + A E+ + M + P TYT +I KK
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 376 HPEEVIALHDYMILKGVIPDQKT 398
EE + MI +G+ P T
Sbjct: 434 KLEEACRYFEMMIDEGIPPYSTT 456
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 1/193 (0%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M+ G+ P V ++ C + A + P+ Y+ + G ++
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 273 TDVAKNLVDELRKRK-LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
A+ + DE+ +R ++D +N L+ SG +D + + EM +LGL + ++
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
I+ C G A +++ M + P+ T+ +I K ++ L D MI KG
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 392 VIPDQKTYDAIVT 404
PD TY++I+
Sbjct: 344 ANPDTWTYNSIMA 356
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 171/387 (44%), Gaps = 36/387 (9%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
+YN +++ K A +V DM K TY +I R G +E++ L +EM
Sbjct: 240 AYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEM 296
Query: 109 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL---------- 158
+ GL N+V YN+++ L + +++A +V S M++ P++Y+Y++L
Sbjct: 297 ITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQL 356
Query: 159 --------------TEG--------LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 196
T+G L + G+++EA +L + F + + S +L
Sbjct: 357 VRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLES 416
Query: 197 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 256
+C + + +G+ D TV KL L+ M K P+
Sbjct: 417 LCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPD 476
Query: 257 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTT 315
+ YN I ++ D A N+ +EL + D ++N+LI+ +G +DEA
Sbjct: 477 IFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFK 536
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
EM+ GL+ + VTY+TL+ K E A L + M+++G +P+ +TY L+ K
Sbjct: 537 EMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNG 596
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAI 402
E + L+ M +G+ PD TY +
Sbjct: 597 RTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 166/438 (37%), Gaps = 103/438 (23%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD------------------- 106
+L MVK+ ++ T LI + L+ LRL
Sbjct: 155 VRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYL 214
Query: 107 -------------EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 153
E+ G +I YN +L L + E+A +V DM +H D+Y
Sbjct: 215 RSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEY 271
Query: 154 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 213
+Y I+ + R G EA+ L N+++ L + N L+ + K M
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 214 ITRGLPPDVYTKATV------------IDGNC--------------------KLGNTEKA 241
+ G P+ YT + + +DG KLG+ +A
Sbjct: 332 VETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEA 391
Query: 242 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL------------ 289
RL+ M + Y S + LC T A ++ ++ ++ ++
Sbjct: 392 HRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSA 451
Query: 290 ------------------------DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 325
D T+N LI+ + G++DEA + E++ +
Sbjct: 452 LGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 385
++YN+LIN L KNG +EA K M +G+ PD +TY+TL+ F K E +L +
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFE 571
Query: 386 YMILKGVIPDQKTYDAIV 403
M++KG P+ TY+ ++
Sbjct: 572 EMLVKGCQPNIVTYNILL 589
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 146/338 (43%), Gaps = 41/338 (12%)
Query: 35 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 94
N M + N V YN+++ K + A +V MV+ G P+ TY+ L++
Sbjct: 293 FNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVA 352
Query: 95 WGSLEESLRLCDEMVE-RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 153
G L +RL D +VE + +Y+ ++ L + G + EA ++ DM + ++
Sbjct: 353 EGQL---VRL-DGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD 408
Query: 154 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 213
SY + E LC G EA+++ ++I + ++ D N + + + K M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 214 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 273
G PD++T +I ++G ++A+ ++ + + D +P++ YNS IN L K
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 274 DVAKNLVDELRKRKL-LDATTFNTLISGYSNS---------------------------- 304
D A E++++ L D T++TL+ + +
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 305 -------GQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
G+ EA L ++MK GL+ + +TY L L
Sbjct: 589 LDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+L+ C G A++++ K++ V +++ YN++ + K + ++ M
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIH---EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G P + TY LI + R G ++E++ + +E+ P+I+ YNS++ L ++GD++
Sbjct: 470 KDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVD 529
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA +M +K + PD +Y+ L E + + A L ++L + + NILL
Sbjct: 530 EAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
+ + K+ M +GL PD T
Sbjct: 590 DCLEKNGRTAEAVDLYSKMKQQGLTPDSIT 619
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ + G +D A+ + +++ + P+ +SYNS+IN K G + A +M
Sbjct: 482 ILIASFGRVGEVDEAINIFEELE---RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEM 538
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G P V TY+TL++ + + +E + L +EM+ +G PNIV YN +L L ++G
Sbjct: 539 QEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRT 598
Query: 134 EEASKVLSDMIDKHICPDQYSYAIL 158
EA + S M + + PD +Y +L
Sbjct: 599 AEAVDLYSKMKQQGLTPDSITYTVL 623
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 177/380 (46%), Gaps = 16/380 (4%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D K G L+ A + +M L +G + ++V++N++I+ G L AE +L M
Sbjct: 311 LIDLYGKAGRLNDAANLFSEM-LKSGVPI--DTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P +TY L+ +A G +E +L ++ + GLFP+ V + ++L+ L + +
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
E V+++M I D++S ++ + G + +A L + + D + + +L ++
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER-FQLDCVLSSTTLAAVI 486
Query: 195 N-YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ Y K G G DV +I K EKAL L+ GM
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA------TTFNTLISGYSNSGQI 307
P+ YNS L + D A+ ++ E +LD+ T+ +I+ Y G +
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAE-----MLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 308 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
+A L M+ G+ N V Y +LIN ++G EEA + +MM G++ + I T+L
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Query: 368 ITHFNKKHHPEEVIALHDYM 387
I ++K EE ++D M
Sbjct: 662 IKAYSKVGCLEEARRVYDKM 681
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 158/339 (46%), Gaps = 2/339 (0%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVL-GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
+S + ++I+ + +KG + AE V G +G V Y +I Y + E++L L
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
M +G +P+ YNS+ L ++EA ++L++M+D P +YA + R
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G L++A+ L+ + K + + L+N +S M G+ +
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIV 657
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
++I K+G E+A R+Y+ M + P++ NS ++ + A+++ + LR
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALR 717
Query: 285 KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
++ D +F T++ Y G +DEA + EM+ GL ++ ++N ++ +G E
Sbjct: 718 EKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSE 777
Query: 345 AKELM-KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA 382
EL +M++ + + D T+ TL T K P E ++
Sbjct: 778 CCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVS 816
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 147/330 (44%), Gaps = 13/330 (3%)
Query: 84 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 143
T+ TLID Y + G L ++ L EM++ G+ + V +N++++ HG + EA +L M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 144 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 203
+K I PD +Y IL G + AL+ + +I K L D + +L+ +C+
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 204 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 263
M + D ++ ++ G +A L+ ++D + T +
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFE-RFQLDCVLSSTTLAAV 485
Query: 264 IN-----GLCKMASTDV--AKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTE 316
I+ GL A T +N+ + D +N +I Y + ++A L
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRN-----DVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
MK+ G + TYN+L +L +EA+ ++ M+ G +P C TY +I + +
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 377 PEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ + L++ M GV P++ Y +++ F
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 138/348 (39%), Gaps = 66/348 (18%)
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
S + L+ RW + R + PN++ YN +L L R G +E
Sbjct: 111 SPKEQTVLLKEQTRWERVLRVFRFFQS--HQSYVPNVIHYNIVLRALGRAGKWDELRLCW 168
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEAL---KLHNQILKFDLIEDAFSLNILLNYI 197
+M + P +Y +L + + G + EAL K Q + F
Sbjct: 169 IEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHF---------------- 212
Query: 198 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG---------M 248
PD T ATV+ G ++A R + G +
Sbjct: 213 ----------------------PDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDL 250
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDV----AKNLVD---------ELRKRKLLDATTFN 295
+D+ P S +N L + S ++ A+N ++ + RK +TFN
Sbjct: 251 DSIDDFPKNGSAQSPVN-LKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFN 309
Query: 296 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 355
TLI Y +G++++A L +EM G+ + VT+NT+I+ +G EA+ L+K M +
Sbjct: 310 TLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEK 369
Query: 356 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
GI PD TY L++ E + + + G+ PD T+ A++
Sbjct: 370 GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 143/361 (39%), Gaps = 21/361 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNL------------MTGNSVWPNSVSYNSIINGFCKKGG 62
+LD CK G A + + L M V PN V Y S+INGF + G
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 63 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 122
+ A + M + G + + +LI Y++ G LEE+ R+ D+M + P++ NS
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS 695
Query: 123 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 182
+L G + EA + + + +K C D S+A + G L EA+++ ++ +
Sbjct: 696 MLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESG 754
Query: 183 LIEDAFSLN-ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 241
L+ D S N ++ Y ++ R L D T T+ K G +A
Sbjct: 755 LLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA 814
Query: 242 ---LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 298
L+ K P +T GL A + E+ + +N +I
Sbjct: 815 VSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHF----AYNAVI 870
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 358
YS SG ID A M+ GL + VT L+ + K G E K + + +
Sbjct: 871 YTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELE 930
Query: 359 P 359
P
Sbjct: 931 P 931
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 162/394 (41%), Gaps = 19/394 (4%)
Query: 25 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 84
+DL + + + M + P +Y ++I + + G L A ++ M K G +P+
Sbjct: 563 VDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVV 622
Query: 85 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 144
Y +LI+G+A G +EE+++ M E G+ N +V S++ + G +EEA +V M
Sbjct: 623 YGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 682
Query: 145 DKHICPD-QYSYAILTEGLCRN-GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
D PD S ++L+ LC + G ++EA + N L+ D S ++ Y+ K
Sbjct: 683 DSEGGPDVAASNSMLS--LCADLGIVSEAESIFNA-LREKGTCDVISFATMM-YLYKGMG 738
Query: 203 XXXXXXXXG-SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 261
M GL D + V+ G + L++ M+ E+ L +
Sbjct: 739 MLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLV--ERKLLLDWG 796
Query: 262 SFINGLCKMASTDVAKNLVDELR-----KRKLLDATTFNTLISGYSNSGQIDEAFGLTTE 316
+F + V V +L+ + L TL +S G A E
Sbjct: 797 TFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATL---FSAMGLYAYALESCQE 853
Query: 317 MKSLGLSANRVTYNTLINLLCKNG-CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
+ S + YN +I +G D K M+M +G+ PD +T L+ + K
Sbjct: 854 LTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQ-EKGLEPDIVTQAYLVGIYGKAG 912
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
E V +H + + P Q + A+ ++ A
Sbjct: 913 MVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSA 946
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 163/367 (44%), Gaps = 14/367 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LLD CK GS+ A KV + M PN + S++ G+C++G L+ A+EVL M
Sbjct: 208 LLDALCKNGSVKEASKVFEDMR----EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 263
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR-HGDM 133
+AG EP + + L+ GYA G + ++ L ++M +RG PN+ Y ++ L R M
Sbjct: 264 EAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRM 323
Query: 134 EEASKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+EA +V +M +++ C D +Y L G C+ G + + + + + K ++ +
Sbjct: 324 DEAMRVFVEM-ERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
++ K M RG PD+ VI CKLG ++A+RL+N M
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG 312
P + + ING A N E+ R + A + TL S +N + D+
Sbjct: 443 LSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVR-DDKLE 501
Query: 313 LTTEM------KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
+ ++ K+ N + I+ L G +EA M+ + P TY
Sbjct: 502 MAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 367 LITHFNK 373
L+ NK
Sbjct: 562 LMKGLNK 568
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 5/317 (1%)
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
EP + + L+ +A +++++ + DEM + GL P+ V+ +L L ++G ++EASK
Sbjct: 166 EPEL--FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASK 223
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
V DM +K P+ + L G CR G L EA ++ Q+ + L D LL+
Sbjct: 224 VFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYA 282
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL-GNTEKALRLYNGMIKMDEQPNL 257
+ M RG P+V +I C+ ++A+R++ M + + ++
Sbjct: 283 HAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADI 342
Query: 258 TIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTE 316
Y + I+G CK D +++D++RK+ ++ + T+ ++ + Q +E L +
Sbjct: 343 VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEK 402
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
MK G + + YN +I L CK G +EA L M G+ P T+ +I F +
Sbjct: 403 MKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF 462
Query: 377 PEEVIALHDYMILKGVI 393
E M+ +G+
Sbjct: 463 LIEACNHFKEMVSRGIF 479
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 142/322 (44%), Gaps = 21/322 (6%)
Query: 93 ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM-EEASKVLSDMIDKHICPD 151
A WG +EE + E++E LF +L + +M ++A +VL +M + PD
Sbjct: 149 AVWGLIEEMRKTNPELIEPELF-------VVLMRRFASANMVKKAVEVLDEMPKYGLEPD 201
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI-----LLNYICKSXXXXXX 206
+Y + L + LC+NG + EA K+ F+ + + F N+ LL C+
Sbjct: 202 EYVFGCLLDALCKNGSVKEASKV------FEDMREKFPPNLRYFTSLLYGWCREGKLMEA 255
Query: 207 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 266
M GL PD+ ++ G G A L N M K +PN+ Y I
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQA 315
Query: 267 LCKMAST-DVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 324
LC+ D A + E+ + D T+ LISG+ G ID+ + + +M+ G+
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP 375
Query: 325 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 384
++VTY ++ K EE EL++ M +G PD + Y +I K +E + L
Sbjct: 376 SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 435
Query: 385 DYMILKGVIPDQKTYDAIVTPF 406
+ M G+ P T+ ++ F
Sbjct: 436 NEMEANGLSPGVDTFVIMINGF 457
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 132/300 (44%), Gaps = 12/300 (4%)
Query: 14 VLLDGACKT-GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 72
VL+ C+T +D A++V +M + + V+Y ++I+GFCK G + VL D
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEA---DIVTYTALISGFCKWGMIDKGYSVLDD 367
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M K G PS TY ++ + + EE L L ++M RG P++++YN ++ + G+
Sbjct: 368 MRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGE 427
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF--SL 190
++EA ++ ++M + P ++ I+ G G+L EA +++ + +L
Sbjct: 428 VKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTL 487
Query: 191 NILLNYICKSXXXXXXXXXXG--SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
LLN + + S T +V I G+ ++A M
Sbjct: 488 KSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDM 547
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQID 308
++MD P Y + GL K+ + +A + +++ K +F Y G+ D
Sbjct: 548 MEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSFKM----YKKKGEED 603
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 155/344 (45%), Gaps = 1/344 (0%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+ V++ SI++ + KG + V MV G +P++ +Y L+ YA G +L +
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
++ + G+ P++V Y +L R +A +V M + P+ +Y L +
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 305
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
NG+L EA+++ Q+ + + + S+ LL +S + +RG+ +
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 365
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+ I EKA+ LY M K + + + I+G C+M+ A + + E+
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Query: 285 KRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+ L +++++ YS GQ+ EA + +MK G + + Y ++++ +
Sbjct: 426 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 485
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
+A EL M GI PD I + L+ FNK P V L D M
Sbjct: 486 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 529
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 157/380 (41%), Gaps = 3/380 (0%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV--KAGFEPSVRTYAT 87
K + LM G V P++ ++N II K G A ++ M +A P V T+ +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
++ Y+ G +E + + MV GL PNIV YN+++ HG A VL D+
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
I PD SY L R+ +A ++ + K + + N L++ +
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
M G+ P+V + T++ + + + N YNS I
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 268 CKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANR 326
A + A L +RK+K+ D+ TF LISG + EA EM+ L + +
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK 433
Query: 327 VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDY 386
Y++++ K G EA+ + M M G PD I YT+++ +N + L
Sbjct: 434 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 493
Query: 387 MILKGVIPDQKTYDAIVTPF 406
M G+ PD A++ F
Sbjct: 494 MEANGIEPDSIACSALMRAF 513
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 165/366 (45%), Gaps = 9/366 (2%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P++ +Y+++IN + G A ++ DM++A PS TY LI+ G+ E+L +
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD---MIDKHICPDQYSYAILTEG 161
C +M + G+ P++V +N +L Y+ G + SK LS M + PD ++ I+
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLS-AYKSG--RQYSKALSYFELMKGAKVRPDTTTFNIIIYC 160
Query: 162 LCRNGYLTEALKLHNQIL--KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
L + G ++AL L N + + + D + +++ +M+ GL
Sbjct: 161 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
P++ + ++ G + AL + + + P++ Y +N + AK +
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 280 VDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
+RK R+ + T+N LI Y ++G + EA + +M+ G+ N V+ TL+ +
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
+ ++ +GI + Y + I + E+ IAL+ M K V D T
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 400
Query: 399 YDAIVT 404
+ +++
Sbjct: 401 FTILIS 406
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 155/363 (42%), Gaps = 3/363 (0%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
YN +I + + A + +M K +P TY LI+ + R G ++ L D+M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
+ P+ YN+++ G+ EA +V M D + PD ++ I+ +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP--PDVYTKAT 227
+AL + + D + NI++ + K SM + PDV T +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
++ G E ++ M+ +PN+ YN+ + + A +++ ++++
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 288 LL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
++ D ++ L++ Y S Q +A + M+ N VTYN LI+ NG EA
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
E+ + M GI+P+ ++ TL+ ++ V + +G+ + Y++ + +
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 407 LLA 409
+ A
Sbjct: 374 INA 376
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 3/291 (1%)
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
+YN ++ RH +++A + +M PD +Y L R G A+ L + +
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 179 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 238
L+ + + N L+N S M G+ PD+ T V+
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL---LDATTFN 295
KAL + M +P+ T +N I L K+ + A +L + +R+++ D TF
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 296 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 355
+++ YS G+I+ + M + GL N V+YN L+ +G A ++ +
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 356 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
GI PD ++YT L+ + + P + + M + P+ TY+A++ +
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 146/363 (40%), Gaps = 5/363 (1%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
PN V+YN++I+ + G L A E+ M + G +P+V + TL+ +R +
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
RG+ N YNS + ++E+A + M K + D ++ IL G CR
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Query: 165 NGYLTEALKLHNQI--LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
EA+ ++ L L ++ +S ++L Y K M G PDV
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYS-SVLCAY-SKQGQVTEAESIFNQMKMAGCEPDV 468
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
+++ KA L+ M +P+ ++ + K L+D
Sbjct: 469 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL 528
Query: 283 LRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
+R++++ F + S + + A L M S + N +++L K+G
Sbjct: 529 MREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGK 588
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 401
E +L +I G+ + TY L+ H + + I + ++M G+ P + Y
Sbjct: 589 VEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRD 648
Query: 402 IVT 404
I++
Sbjct: 649 IIS 651
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 15/258 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G+C+ A+ +K+M + S+ Y+S++ + K+G + AE + M
Sbjct: 403 ILISGSCRMSKYPEAISYLKEMEDL---SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Query: 74 VKAGFEPSVRTYATLIDGY---ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
AG EP V Y +++ Y +WG ++ L EM G+ P+ + ++++ +
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNASEKWG---KACELFLEMEANGIEPDSIACSALMR-AFNK 515
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
G VL D++ + P ++ A+ E L E + + I D + S+
Sbjct: 516 GGQPSNVFVLMDLMREKEIP--FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 573
Query: 191 ---NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
N +L+ KS +I G+ ++ T A +++ +GN K + +
Sbjct: 574 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 633
Query: 248 MIKMDEQPNLTIYNSFIN 265
M QP+ +Y I+
Sbjct: 634 MSGAGIQPSNQMYRDIIS 651
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 1/349 (0%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+ V++ SI++ + KG + V MV G +P++ +Y L+ YA G +L +
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
++ + G+ P++V Y +L R +A +V M + P+ +Y L +
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
NG+L EA+++ Q+ + + + S+ LL +S + +RG+ +
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+ I EKA+ LY M K + + + I+G C+M+ A + + E+
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 285 KRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+ L +++++ YS GQ+ EA + +MK G + + Y ++++ +
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 392
+A EL M GI PD I + L+ FNK P V L D M K +
Sbjct: 618 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 157/380 (41%), Gaps = 3/380 (0%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV--KAGFEPSVRTYAT 87
K + LM G V P++ ++N II K G A ++ M +A P V T+ +
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
++ Y+ G +E + + MV GL PNIV YN+++ HG A VL D+
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
I PD SY L R+ +A ++ + K + + N L++ +
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 445
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
M G+ P+V + T++ + + + N YNS I
Sbjct: 446 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 505
Query: 268 CKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANR 326
A + A L +RK+K+ D+ TF LISG + EA EM+ L + +
Sbjct: 506 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK 565
Query: 327 VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDY 386
Y++++ K G EA+ + M M G PD I YT+++ +N + L
Sbjct: 566 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 625
Query: 387 MILKGVIPDQKTYDAIVTPF 406
M G+ PD A++ F
Sbjct: 626 MEANGIEPDSIACSALMRAF 645
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 165/366 (45%), Gaps = 9/366 (2%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P++ +Y+++IN + G A ++ DM++A PS TY LI+ G+ E+L +
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD---MIDKHICPDQYSYAILTEG 161
C +M + G+ P++V +N +L Y+ G + SK LS M + PD ++ I+
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLS-AYKSG--RQYSKALSYFELMKGAKVRPDTTTFNIIIYC 292
Query: 162 LCRNGYLTEALKLHNQIL--KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
L + G ++AL L N + + + D + +++ +M+ GL
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
P++ + ++ G + AL + + + P++ Y +N + AK +
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 280 VDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
+RK R+ + T+N LI Y ++G + EA + +M+ G+ N V+ TL+ +
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
+ ++ +GI + Y + I + E+ IAL+ M K V D T
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVT 532
Query: 399 YDAIVT 404
+ +++
Sbjct: 533 FTILIS 538
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 171/399 (42%), Gaps = 5/399 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+ + G ++L + V K M + N N + YN +I + + A + +M
Sbjct: 112 VLIRELSRRGCIELCVNVFKWMKIQK-NYCARNDI-YNMMIRLHARHNWVDQARGLFFEM 169
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K +P TY LI+ + R G ++ L D+M+ + P+ YN+++ G+
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA +V M D + PD ++ I+ ++AL + + D + NI+
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLP--PDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
+ + K SM + PDV T +++ G E ++ M+
Sbjct: 290 IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE 349
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 310
+PN+ YN+ + + A +++ ++++ ++ D ++ L++ Y S Q +A
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
+ M+ N VTYN LI+ NG EA E+ + M GI+P+ ++ TL+
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
++ V + +G+ + Y++ + ++ A
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 508
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 146/363 (40%), Gaps = 5/363 (1%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
PN V+YN++I+ + G L A E+ M + G +P+V + TL+ +R +
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
RG+ N YNS + ++E+A + M K + D ++ IL G CR
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Query: 165 NGYLTEALKLHNQI--LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
EA+ ++ L L ++ +S ++L Y K M G PDV
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYS-SVLCAY-SKQGQVTEAESIFNQMKMAGCEPDV 600
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
+++ KA L+ M +P+ ++ + K L+D
Sbjct: 601 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL 660
Query: 283 LRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
+R++++ F + S + + A L M S + N +++L K+G
Sbjct: 661 MREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGK 720
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 401
E +L +I G+ + TY L+ H + + I + ++M G+ P + Y
Sbjct: 721 VEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRD 780
Query: 402 IVT 404
I++
Sbjct: 781 IIS 783
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 15/258 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G+C+ A+ +K+M + S+ Y+S++ + K+G + AE + M
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDL---SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 74 VKAGFEPSVRTYATLIDGY---ARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
AG EP V Y +++ Y +WG ++ L EM G+ P+ + ++++ +
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNASEKWG---KACELFLEMEANGIEPDSIACSALMR-AFNK 647
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
G VL D++ + P ++ A+ E L E + + I D + S+
Sbjct: 648 GGQPSNVFVLMDLMREKEIP--FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 705
Query: 191 ---NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
N +L+ KS +I G+ ++ T A +++ +GN K + +
Sbjct: 706 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 765
Query: 248 MIKMDEQPNLTIYNSFIN 265
M QP+ +Y I+
Sbjct: 766 MSGAGIQPSNQMYRDIIS 783
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 176/366 (48%), Gaps = 38/366 (10%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
+S+ +N++IN F + G + A + L M + G P+ TY TLI GY G E S L
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173
Query: 106 DEMVERG---LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
D M+E G + PNI +N ++ + +EEA +V+ M + + PD +Y +
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY 233
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
+ G E ++ +++++ ++++ P+
Sbjct: 234 VQKG---ETVRAESEVVEKMVMKEKAK------------------------------PNG 260
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
T V+ G C+ G LR M +M + NL ++NS ING ++ D ++
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL 320
Query: 283 LRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
+++ + D T++T+++ +S++G +++A + EM G+ + Y+ L +
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 380
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 401
++A+EL++ +I++ RP+ + +TT+I+ + ++ + + + M GV P+ KT++
Sbjct: 381 PKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 439
Query: 402 IVTPFL 407
++ +L
Sbjct: 440 LMWGYL 445
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 175/358 (48%), Gaps = 8/358 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+++ ++G+++ A++ + KM + N P + +YN++I G+ G + E+L M+
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLN---PTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 75 KAG---FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
+ G P++RT+ L+ + + +EE+ + +M E G+ P+ V YN+I + G
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 132 DMEEA-SKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
+ A S+V+ M+ K P+ + I+ G CR G + + L+ ++ + + +
Sbjct: 238 ETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
N L+N + M + DV T +TV++ G EKA +++ M+
Sbjct: 298 FNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 357
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDE 309
K +P+ Y+ G + A+ L++ L + F T+ISG+ ++G +D+
Sbjct: 358 KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDD 417
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
A + +M G+S N T+ TL+ + +A+E+++MM G++P+ T+ L
Sbjct: 418 AMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 475
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 144/319 (45%), Gaps = 42/319 (13%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE-EVLGD 72
VL+ CK ++ A +V+KKM V P++V+YN+I + +KG + AE EV+
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEEC---GVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 73 MV-KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
MV K +P+ RT ++ GY R G + + LR M E + N+VV+NS++
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
D + +VL+ M + ++ D +Y+ + GY+ +A ++ +
Sbjct: 310 DRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE-------------- 355
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
M+ G+ PD + + + G + +KA L +I +
Sbjct: 356 ---------------------MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-V 393
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 310
+ +PN+ I+ + I+G C S D A + +++ K + + TF TL+ GY Q +A
Sbjct: 394 ESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKA 453
Query: 311 FGLTTEMKSLGLSANRVTY 329
+ M+ G+ T+
Sbjct: 454 EEVLQMMRGCGVKPENSTF 472
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 159/371 (42%), Gaps = 49/371 (13%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA---RWGSLEESLRLC 105
S ++N ++G A+ V + + G PS+ +Y TL+ ++GS+ +
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS---IV 103
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
E+ + G + + +N+++ G+ME+A + L M + + P +Y L +G
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G + +L DL+ + ++++ P++ T
Sbjct: 164 GKPERSSEL------LDLMLEEGNVDV--------------------------GPNIRTF 191
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE--- 282
++ CK E+A + M + +P+ YN+ + T A++ V E
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 283 LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN----LLCK 338
++++ + T ++ GY G++ + MK + + AN V +N+LIN ++ +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
+G DE ++ +M ++ D ITY+T++ ++ + E+ + M+ GV PD
Sbjct: 312 DGIDE----VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 367
Query: 399 YDAIVTPFLLA 409
Y + ++ A
Sbjct: 368 YSILAKGYVRA 378
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 40/188 (21%)
Query: 25 LDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRT 84
+D L +MK+ N V + ++Y++++N + G + A +V +MVKAG +P
Sbjct: 314 IDEVLTLMKECN------VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 367
Query: 85 YATLIDGYAR-------------------------------W---GSLEESLRLCDEMVE 110
Y+ L GY R W GS+++++R+ ++M +
Sbjct: 368 YSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 427
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
G+ PNI + ++++ +A +VL M + P+ ++ +L E G E
Sbjct: 428 FGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 487
Query: 171 ALKLHNQI 178
+ K N +
Sbjct: 488 SNKAINAL 495
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 181/393 (46%), Gaps = 12/393 (3%)
Query: 16 LDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE--EVLGDM 73
+ G + D A +V + M+ + +V+P++V+ +I +K G E E+ M
Sbjct: 280 ISGLSASQRYDDAWEVYEAMDKI---NVYPDNVTCAILITTL-RKAGRSAKEVWEIFEKM 335
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ G + S + L+ + G EE+L + EM ++G+ N +VYN+++ + +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EE + ++M DK + P +Y IL + R L ++ L + S L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 194 LNYICKSXXXXXXXXXXG-SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
++ ++ M GL P ++ +I G EKA + M K
Sbjct: 456 ISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG 515
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNL-VDELRKRKLLDAT--TFNTLISGYSNSGQIDE 309
+P++ Y S ++ + S D K + + +L R+ + T T+NTL+ G++ G E
Sbjct: 516 IKPSVETYTSVLDAFRR--SGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIE 573
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
A + +E +GL + +TYN L+N + G D + +L+K M ++PD ITY+T+I
Sbjct: 574 ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIY 633
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
F + + H M+ G +PD ++Y+ +
Sbjct: 634 AFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 135/312 (43%), Gaps = 11/312 (3%)
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
L L + ++ F ++ +YN+ + L ++A +V M ++ PD + AIL
Sbjct: 258 LLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITT 317
Query: 162 LCRNGYLTEAL-----KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 216
L + G + + K+ + +K+ +D F L+ C M +
Sbjct: 318 LRKAGRSAKEVWEIFEKMSEKGVKWS--QDVF--GGLVKSFCDEGLKEEALVIQTEMEKK 373
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
G+ + T++D K + E+ L+ M +P+ YN ++ + D+
Sbjct: 374 GIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIV 433
Query: 277 KNLVDELRKRKL-LDATTFNTLISGYSNSGQI-DEAFGLTTEMKSLGLSANRVTYNTLIN 334
+ L+ E+ L + ++ LIS Y + ++ D A MK +GL + +Y LI+
Sbjct: 434 ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
+G E+A + M +GI+P TYT+++ F + +++ + M+ + +
Sbjct: 494 AYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG 553
Query: 395 DQKTYDAIVTPF 406
+ TY+ ++ F
Sbjct: 554 TRITYNTLLDGF 565
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 179/420 (42%), Gaps = 40/420 (9%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G L +V+ ++L++ + P+ +NSI++ K+ + E M+ +G V
Sbjct: 123 GRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDV 182
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
TY L+ G + + + +L M G+ PN VVYN++L+ L ++G + A ++S+
Sbjct: 183 YTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSE 242
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M + P+ ++ IL C L +++ L + + D ++ ++ +C
Sbjct: 243 MKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGR 298
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
+ ++G DV T++ G C LG A R + M + PN+ YN
Sbjct: 299 VSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNL 358
Query: 263 FINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK-SL 320
I G C + D A + ++++ + + TFNTLI G S G+ D+ + M+ S
Sbjct: 359 LIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD 418
Query: 321 GLSANRV-TYNTLIN---------------------------------LLCKNGCDEEAK 346
+ R+ YN +I LC+ G ++ K
Sbjct: 419 TVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLK 478
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
MI +G P I LI +++ EE + L + M+ +G +P T++A++ F
Sbjct: 479 TAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGF 538
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 158/376 (42%), Gaps = 47/376 (12%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKA-GFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
+Y ++ + C ++L +M + G P + T+I G+ R ++ + + D
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 108 MVERGLFPNIVVYNSILYWLYR-------------------HGD---------------- 132
+ + G+ P++ V+NSIL L + HGD
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+ + K+L M + P+ Y L LC+NG + A L +++ + + + NI
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNI 253
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L++ C + G PDV T V++ C G +AL + +
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAF 311
+ ++ N+ + G C + VA+ E+ RK L + T+N LI+GY + G +D A
Sbjct: 314 GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSAL 373
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM----IMQGIRPDCITYTTL 367
+MK+ + N T+NTLI L G ++ ++++MM + G R D Y +
Sbjct: 374 DTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID--PYNCV 431
Query: 368 ITHFNKKHHPEEVIAL 383
I F K++ E+ +
Sbjct: 432 IYGFYKENRWEDALEF 447
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 164/396 (41%), Gaps = 20/396 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL CK G + A +M +M PN V++N +I+ +C + L+ + +L
Sbjct: 223 LLHALCKNGKVGRARSLMSEMK-------EPNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
GF P V T +++ G + E+L + + + +G ++V N+++ G M
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS-LNIL 193
A + +M K P+ +Y +L G C G L AL N +K D I F+ N L
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFND-MKTDAIRWNFATFNTL 394
Query: 194 LNYIC----KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
+ + S G D Y VI G K E AL ++
Sbjct: 395 IRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYN--CVIYGFYKENRWEDALEF---LL 449
Query: 250 KMDEQPNLTIYNSF-INGLCKMASTDVAKNLVDELRKRKLLDATTF-NTLISGYSNSGQI 307
KM++ + SF + LC+ D K D++ + + + LI YS G+I
Sbjct: 450 KMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509
Query: 308 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
+E+ L +M + G T+N +I CK + ++ M +G PD +Y L
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 368 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ K ++ L M+ K ++PD + +++
Sbjct: 570 LEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 126/298 (42%), Gaps = 8/298 (2%)
Query: 114 FPNIV----VYNSILYWLYRHGDMEEASKVLSDMIDK-HICPDQYSYAILTEGLCRNGYL 168
FP + Y ++ + L + ++L +M D + PD + + G R +
Sbjct: 69 FPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLI 128
Query: 169 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
+ + + + KF + N +L+ + K M+ G+ DVYT +
Sbjct: 129 KRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGIL 188
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
+ G +L M PN +YN+ ++ LCK A++L+ E+++
Sbjct: 189 MKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP-- 246
Query: 289 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
+ TFN LIS Y N ++ ++ L + SLG + VT ++ +LC G EA E+
Sbjct: 247 -NDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Query: 349 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
++ + +G + D + TL+ + M KG +P+ +TY+ ++ +
Sbjct: 306 LERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGY 363
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 145/360 (40%), Gaps = 47/360 (13%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C G + AL+V++++ G + V+ N+++ G+C G + +A+ +M + G+
Sbjct: 294 CNEGRVSEALEVLERVESKGGKV---DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYL 350
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P+V TY LI GY G L+ +L ++M + N +N+++ L G ++ K+
Sbjct: 351 PNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKI 410
Query: 140 LSDMIDKHICP----DQYSYAILTEGLCRNGYLTEALKLHNQILKFD-LIEDAFSLNILL 194
L M D D Y+ I G + +AL+ +LK + L A + L
Sbjct: 411 LEMMQDSDTVHGARIDPYNCVIY--GFYKENRWEDALEF---LLKMEKLFPRAVDRSFKL 465
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+C+ MI G P + +I + G E++L L N M+
Sbjct: 466 ISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYL 525
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLT 314
P ++TFN +I G+ ++
Sbjct: 526 PR----------------------------------SSTFNAVIIGFCKQDKVMNGIKFV 551
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 374
+M G + +YN L+ LC G ++A L M+ + I PD +++L+ ++K
Sbjct: 552 EDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQK 611
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 118/302 (39%), Gaps = 38/302 (12%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G C G + +A + +M PN +YN +I G+C G L A + DM
Sbjct: 324 LVKGYCALGKMRVAQRFFIEME---RKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF--PNIVVYNSILYWLYRHGD 132
+ T+ TLI G + G ++ L++ + M + I YN ++Y Y+
Sbjct: 381 TDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENR 440
Query: 133 MEEASKVL---------------------------------SDMIDKHICPDQYSYAILT 159
E+A + L MI + P L
Sbjct: 441 WEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLI 500
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
++G + E+L+L N ++ + + + N ++ CK M RG
Sbjct: 501 HRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCV 560
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PD + +++ C G+ +KA L++ M++ P+ ++++S + L + + V +L
Sbjct: 561 PDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 620
Query: 280 VD 281
D
Sbjct: 621 QD 622
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 3 LIGSGGC---IKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK 59
+IG GG I L+ + G ++ +L+++ N M P S ++N++I GFCK
Sbjct: 484 MIGEGGVPSIIVSHCLIHRYSQHGKIEESLELI---NDMVTRGYLPRSSTFNAVIIGFCK 540
Query: 60 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 119
+ ++ + + DM + G P +Y L++ G ++++ L MVE+ + P+ +
Sbjct: 541 QDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSM 600
Query: 120 YNSILYWL 127
++S+++ L
Sbjct: 601 WSSLMFCL 608
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 150/323 (46%), Gaps = 2/323 (0%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
YN +I+ K LA ++ M E S+ T+ LI Y R G E++ + M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
+ G P+ + ++ ++ L R EA + D+ PD Y L G CR G ++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 229
EA K+ ++ + + ++ +I+++ +C+ M+ G P+ T ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL- 288
+ K G TEK L++YN M K+ +P+ YN I C+ + + A +++ + K+K
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 289 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
++A+TFNT+ ++ A + ++M N VTYN L+ + + + ++
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 349 MKMMIMQGIRPDCITYTTLITHF 371
K M + + P+ TY L+T F
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMF 475
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 155/337 (45%), Gaps = 5/337 (1%)
Query: 27 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 86
LA + + N M P+ ++++ +I+ +K A+ D +K FEP V Y
Sbjct: 201 LASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYT 259
Query: 87 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 146
L+ G+ R G + E+ ++ EM G+ PN+ Y+ ++ L R G + A V +DM+D
Sbjct: 260 NLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS 319
Query: 147 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 206
P+ ++ L + G + L+++NQ+ K D + N L+ C+
Sbjct: 320 GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENA 379
Query: 207 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 266
+MI + + T T+ K + A R+Y+ M++ +PN YN +
Sbjct: 380 VKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRM 439
Query: 267 LCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEM-KSLGLSA 324
STD+ + E+ +++ + T+ L++ + G + A+ L EM + L+
Sbjct: 440 FVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTP 499
Query: 325 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI--RP 359
+ Y ++ L + G ++ +EL++ MI +G+ RP
Sbjct: 500 SLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVARP 536
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 137/278 (49%), Gaps = 8/278 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G C+ G + A KV K+M L + PN +Y+ +I+ C+ G + A +V DM+
Sbjct: 261 LVRGWCRAGEISEAEKVFKEMKLA---GIEPNVYTYSIVIDALCRCGQISRAHDVFADML 317
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+G P+ T+ L+ + + G E+ L++ ++M + G P+ + YN ++ R ++E
Sbjct: 318 DSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLE 377
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A KVL+ MI K + ++ + + + + A ++++++++ + + NIL+
Sbjct: 378 NAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
S M + + P+V T ++ C +G+ A +L+ M+ +E+
Sbjct: 438 RMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV--EEK 495
Query: 255 ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 289
P+L++Y + L + + LV+++ ++ L+
Sbjct: 496 CLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 133/328 (40%), Gaps = 37/328 (11%)
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
S Y +ID + + + L D M R + +I + ++ R G EA
Sbjct: 150 SPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+ M D PD+ +++I+ L R +EA FD ++D F
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSF------FDSLKDRFE----------- 252
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
PDV ++ G C+ G +A +++ M +PN+ Y
Sbjct: 253 -------------------PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTY 293
Query: 261 NSFINGLCKMASTDVAKNL-VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
+ I+ LC+ A ++ D L +A TFN L+ + +G+ ++ + +MK
Sbjct: 294 SIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKK 353
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
LG + +TYN LI C++ E A +++ MI + + T+ T+ + KK
Sbjct: 354 LGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNG 413
Query: 380 VIALHDYMILKGVIPDQKTYDAIVTPFL 407
++ M+ P+ TY+ ++ F+
Sbjct: 414 AHRMYSKMMEAKCEPNTVTYNILMRMFV 441
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 180/402 (44%), Gaps = 18/402 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL++ K G + ++K+ +KM + V SYNS+ ++G ++A+ M
Sbjct: 190 VLIESYGKAGIVQESVKIFQKMKDL---GVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V G EP+ TY ++ G+ LE +LR ++M RG+ P+ +N+++ R M
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM 306
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA K+ +M I P SY + +G + + L++ ++ + +A + + L
Sbjct: 307 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPP---DVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
L +C + +M+ + + P ++ K V K G+ A + M
Sbjct: 367 LPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLV--SQSKAGDMAAATEVLKAMAT 424
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL---------LDATTFNTLISGY 301
++ Y I CK ++ + A L+D L ++++ ++ + +N +I
Sbjct: 425 LNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYL 484
Query: 302 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 361
N+GQ +A L ++ G+ ++ N LI K G + + E++K+M +G+ +
Sbjct: 485 CNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRES 543
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
Y LI + K P + D M+ G +PD + +++
Sbjct: 544 NAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVI 585
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 155/384 (40%), Gaps = 46/384 (11%)
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
+L DM + G + LI+ Y + G ++ES+++ +M + G+ I YNS+ +
Sbjct: 172 ILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVIL 231
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
R G A + + M+ + + P +++Y ++ G + L AL+ + + D
Sbjct: 232 RRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDA 291
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ N ++N C+ M + P V + T+I G + + LR++ M
Sbjct: 292 TFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM 351
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL--DATTFNTLISGYSNSGQ 306
+PN T Y++ + GLC AKN++ + + + D + F L+ S +G
Sbjct: 352 RSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGD 411
Query: 307 IDEAFGLTTEMKSLGLSA------------------NRV--------------------- 327
+ A + M +L + A NR
Sbjct: 412 MAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLE 471
Query: 328 ----TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 383
YN +I LC NG +A+ L + ++ +G++ D LI K+ +P+ +
Sbjct: 472 MEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEI 530
Query: 384 HDYMILKGVIPDQKTYDAIVTPFL 407
M +GV + Y+ ++ ++
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYM 554
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 140/296 (47%), Gaps = 1/296 (0%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF+ TY T++ R E +L DEMV G PN V YN +++ R ++
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA V + M + PD+ +Y L + + G+L A+ ++ ++ + L D F+ ++++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N + K+ M+ +G P++ T +I + K N E AL+LY M Q
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGL 313
P+ Y+ + L + A+ + E+ RK + D + L+ + +G +D+A+
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
M GL N T N+L++ + EA L++ M+ G+ P TYT L++
Sbjct: 592 YQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 160/366 (43%), Gaps = 6/366 (1%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G + + M N M P+ V+Y ++I+ K G L +A ++ M +AG P
Sbjct: 405 GRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDT 464
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
TY+ +I+ + G L + RL EMV +G PN+V +N ++ + + E A K+ D
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRD 524
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M + PD+ +Y+I+ E L G+L EA + ++ + + + D +L++ K+
Sbjct: 525 MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN 584
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
+M+ GL P+V T +++ ++ +A L M+ + P+L Y
Sbjct: 585 VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTL 644
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQ--IDEAFGLTTEMKSL 320
++ C A ++ +L A F + GQ D M S
Sbjct: 645 LLS-CCTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSE 703
Query: 321 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI---TYTTLITHFNKKHHP 377
+ R + +++ L K+G EEA + ++ + + PD + +Y+ + + +
Sbjct: 704 DRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEG 763
Query: 378 EEVIAL 383
VIAL
Sbjct: 764 TAVIAL 769
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 117/254 (46%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
++ K ++ M + PN+V+YN +I+ + + L A V M +AG EP TY TLI
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI 436
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 149
D +A+ G L+ ++ + M E GL P+ Y+ I+ L + G + A ++ +M+ +
Sbjct: 437 DIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT 496
Query: 150 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 209
P+ ++ I+ + ALKL+ + D + +I++ +
Sbjct: 497 PNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGV 556
Query: 210 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
M + PD ++D K GN +KA + Y M++ +PN+ NS ++ +
Sbjct: 557 FAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLR 616
Query: 270 MASTDVAKNLVDEL 283
+ A NL+ +
Sbjct: 617 VHRMSEAYNLLQSM 630
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 34/289 (11%)
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
Y +++ L R E +K+L +M+ P+ +Y L R YL EA+ + NQ+
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 179 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 238
+ D + L++ K+ M GL PD +T + +I+ K G+
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 298
A RL+ C+M NLV TFN +I
Sbjct: 481 PAAHRLF----------------------CEMVGQGCTPNLV------------TFNIMI 506
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 358
+ ++ + + A L +M++ G ++VTY+ ++ +L G EEA+ + M +
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 359 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
PD Y L+ + K + ++ + M+ G+ P+ T +++++ FL
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL 615
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
G D +T T++ + + +L + M++ +PN YN I+ + A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 277 KNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
N+ +++++ D T+ TLI ++ +G +D A + M+ GLS + TY+ +IN
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
L K G A L M+ QG P+ +T+ +I K + E + L+ M G PD
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 396 QKTYDAIV 403
+ TY ++
Sbjct: 534 KVTYSIVM 541
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 155/367 (42%), Gaps = 5/367 (1%)
Query: 29 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 88
+K++K N ++ P+S S + +IN K + +A +L D+V+ G P Y +
Sbjct: 425 VKLLKDHN----KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNI 480
Query: 89 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 148
I+G + G EESL+L EM + G+ P+ N I L D A +L M
Sbjct: 481 IEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGF 540
Query: 149 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 208
P L + LC NG +A K + + + + ++ + K+
Sbjct: 541 EPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLE 600
Query: 209 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 268
+ G PDV +I CK T +A L+N M+ +P + YNS I+G C
Sbjct: 601 LFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC 660
Query: 269 KMASTDVAKN-LVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRV 327
K D + +V K D T+ +LI G SG+ EA EMK NR+
Sbjct: 661 KEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRI 720
Query: 328 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
T+ LI LCK G EA + M + + PD Y +L++ F + + M
Sbjct: 721 TFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREM 780
Query: 388 ILKGVIP 394
+ KG P
Sbjct: 781 VHKGRFP 787
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 1/321 (0%)
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P + + +I+ + ++ ++ L ++V+ GL P ++YN+I+ + + G EE+ K+
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
L +M D + P Q++ + L AL L ++ + L+ +C+
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
+ + G + IDG K ++ L L+ + P++
Sbjct: 557 NGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIA 616
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLLD-ATTFNTLISGYSNSGQIDEAFGLTTEMK 318
Y+ I LCK T A L +E+ + L T+N++I G+ G+ID M
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMY 676
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
+ + +TY +LI+ LC +G EA M + P+ IT+ LI K
Sbjct: 677 EDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSG 736
Query: 379 EVIALHDYMILKGVIPDQKTY 399
E + M K + PD Y
Sbjct: 737 EALVYFREMEEKEMEPDSAVY 757
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 179/442 (40%), Gaps = 68/442 (15%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C TG + AL V ++ L G W + ++ FCK G + A E++ + +
Sbjct: 225 CNTGKSERALSVFNEI-LSRG---WLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIR 280
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
+ +TY LI G+ + ++++ +L ++M G+ +I +Y+ ++ L +H D+E A +
Sbjct: 281 LNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSL 340
Query: 140 LSDMIDKHICPDQ---------YS------------------------YAILTEGLCRNG 166
++ I PD+ +S Y L EG RN
Sbjct: 341 YLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRND 400
Query: 167 YLTEA----------------------LKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 204
+ EA LK HN+ ++ D+ SL+I++N + K+
Sbjct: 401 LVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKA----ILPDSDSLSIVINCLVKANKVD 456
Query: 205 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 264
++ GL P +I+G CK G +E++L+L M +P+ N
Sbjct: 457 MAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIY 516
Query: 265 NGLCKMASTDVAKNLVDELR---KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
L + A +L+ ++R + TTF L+ +G+ +A ++ G
Sbjct: 517 GCLAERCDFVGALDLLKKMRFYGFEPWIKHTTF--LVKKLCENGRAVDACKYLDDVAGEG 574
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
+ V I+ L KN + EL + + G PD I Y LI K E
Sbjct: 575 FLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEAD 634
Query: 382 ALHDYMILKGVIPDQKTYDAIV 403
L + M+ KG+ P TY++++
Sbjct: 635 ILFNEMVSKGLKPTVATYNSMI 656
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/442 (20%), Positives = 165/442 (37%), Gaps = 55/442 (12%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+ G K +D A ++ +KM M N+ + Y+ +I G CK L +A + ++
Sbjct: 288 VLIHGFVKESRIDKAFQLFEKMRRMGMNA---DIALYDVLIGGLCKHKDLEMALSLYLEI 344
Query: 74 VKAGFEPS---------------------------------VRTYATLIDGYARWGSLEE 100
++G P + Y +L +G+ R + E
Sbjct: 345 KRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHE 404
Query: 101 SLRLCDEMV------------------ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+ ++ + + P+ + ++ L + ++ A +L D
Sbjct: 405 AYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHD 464
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
++ + P Y + EG+C+ G E+LKL ++ + F+LN + + +
Sbjct: 465 IVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCD 524
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
M G P + ++ C+ G A + + + ++ +
Sbjct: 525 FVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTA 584
Query: 263 FINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
I+GL K D L ++ D ++ LI + + EA L EM S G
Sbjct: 585 AIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKG 644
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
L TYN++I+ CK G + + M PD ITYT+LI P E I
Sbjct: 645 LKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
Query: 382 ALHDYMILKGVIPDQKTYDAIV 403
+ M K P++ T+ A++
Sbjct: 705 FRWNEMKGKDCYPNRITFMALI 726
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 140/344 (40%), Gaps = 32/344 (9%)
Query: 45 PNSVSYNSIINGFCKK--GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESL 102
PN+ +YN ++ K + L E L +M GF T ++ Y G E +L
Sbjct: 175 PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERAL 234
Query: 103 RLCDEMVERGLFP---NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
+ +E++ RG + ++ S W G +++A +++ + ++ I + +Y +L
Sbjct: 235 SVFNEILSRGWLDEHISTILVVSFCKW----GQVDKAFELIEMLEERDIRLNYKTYCVLI 290
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
G + + +A +L ++ + + D ++L+ +CK + G+P
Sbjct: 291 HGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIP 350
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMI-KMDEQPNLTIYNSFINGLCKMASTDVAKN 278
PD ++ C + R+ +I +D++ + +Y S G + A +
Sbjct: 351 PDRGILGKLL---CSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYS 407
Query: 279 LVDEL-------------------RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
+ L K L D+ + + +I+ + ++D A L ++
Sbjct: 408 FIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQ 467
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
GL + YN +I +CK G EE+ +L+ M G+ P T
Sbjct: 468 NGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFT 511
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 111/270 (41%), Gaps = 10/270 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ C+ G A+ K ++ + G + V+ + I+G K G+ E+ D+
Sbjct: 550 LVKKLCENGR---AVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDIC 606
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G P V Y LI + E+ L +EMV +GL P + YNS++ + G+++
Sbjct: 607 ANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+ M + PD +Y L GLC +G +EA+ N++ D + + L+
Sbjct: 667 RGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALI 726
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+CK M + + PD +++ N ++ M+
Sbjct: 727 QGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRF 786
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELR 284
P +++ ++ M + +V V++LR
Sbjct: 787 P-VSVDRNY------MLAVNVTSKFVEDLR 809
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 124/331 (37%), Gaps = 40/331 (12%)
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
E + + T+++G+ RWG + + G ++ YN++ L R
Sbjct: 70 ELNTKVVETVLNGFKRWGLAYLFFNWASK--QEGYRNDMYAYNAMASILSRARQNASLKA 127
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL-IEDAFSLNILLNYI 197
++ D+++ ++ L G + EA + +++ + L + +A++ N LL I
Sbjct: 128 LVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAI 187
Query: 198 CKSXXXXX--XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
KS M G D +T V+ C G +E+AL ++N
Sbjct: 188 SKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFN--------- 238
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 315
E+ R LD L+ + GQ+D+AF L
Sbjct: 239 --------------------------EILSRGWLDEHISTILVVSFCKWGQVDKAFELIE 272
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
++ + N TY LI+ K ++A +L + M G+ D Y LI K
Sbjct: 273 MLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHK 332
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
E ++L+ + G+ PD+ ++ F
Sbjct: 333 DLEMALSLYLEIKRSGIPPDRGILGKLLCSF 363
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 5/327 (1%)
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLF--PNIVVYNSILYWLYRHGDMEEASK 138
S+ +A + +A G + SLRL M +R ++ PN +Y ++ L R G +++ +
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKYM-QRQIWCKPNEHIYTIMISLLGREGLLDKCLE 162
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
V +M + + +SY L RNG +L+L +++ + + N ++N
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA 222
Query: 199 KSXXX-XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 257
+ M G+ PD+ T T++ G ++A ++ M P+L
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 258 TIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTE 316
T Y+ + K+ + +L+ E+ L D T++N L+ Y+ SG I EA G+ +
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
M++ G + N TY+ L+NL ++G ++ ++L M PD TY LI F + +
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 377 PEEVIALHDYMILKGVIPDQKTYDAIV 403
+EV+ L M+ + + PD +TY+ I+
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGII 429
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 165/388 (42%), Gaps = 8/388 (2%)
Query: 23 GSLDLALKVMKKMNLMTGNSVW--PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
G +L++ K M +W PN Y +I+ ++G L EV +M G
Sbjct: 119 GDWQRSLRLFKYMQ----RQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG-DMEEASKV 139
SV +Y LI+ Y R G E SL L D M + P+I+ YN+++ R G D E +
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
++M + I PD +Y L G EA + + ++ D + + L+ K
Sbjct: 235 FAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGK 294
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
G M + G PD+ + +++ K G+ ++A+ +++ M PN
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
Y+ +N + D + L E++ DA T+N LI + G E L +M
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
+ + TY +I K G E+A+++++ M I P YT +I F + E
Sbjct: 415 EENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYE 474
Query: 379 EVIALHDYMILKGVIPDQKTYDAIVTPF 406
E + + M G P +T+ +++ F
Sbjct: 475 EALVAFNTMHEVGSNPSIETFHSLLYSF 502
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 159/379 (41%), Gaps = 6/379 (1%)
Query: 19 ACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 78
AC G LD ++ M + P+ V+YN++++ +G AE V M G
Sbjct: 220 ACARGGLDWE-GLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
P + TY+ L++ + + LE+ L EM G P+I YN +L + G ++EA
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
V M P+ +Y++L ++G + +L ++ + DA + NIL+
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
+ M+ + PD+ T +I K G E A ++ M D P+
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Query: 259 IYNSFINGLCKMASTD---VAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 315
Y I + A + VA N + E+ ++ TF++L+ ++ G + E+ + +
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE--TFHSLLYSFARGGLVKESEAILS 516
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
+ G+ NR T+N I + G EEA + M PD T +++ ++
Sbjct: 517 RLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFAR 576
Query: 376 HPEEVIALHDYMILKGVIP 394
+E + M ++P
Sbjct: 577 LVDECREQFEEMKASDILP 595
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 157/379 (41%), Gaps = 10/379 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
LL G D A V + MN + P+ +Y+ ++ F K L ++LG+M
Sbjct: 252 TLLSACAIRGLGDEAEMVFRTMN---DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM 308
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G P + +Y L++ YA+ GS++E++ + +M G PN Y+ +L + G
Sbjct: 309 ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRY 368
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++ ++ +M + PD +Y IL E GY E + L + +++ ++ D + +
Sbjct: 369 DDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGI 428
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ K M + P VI+ + E+AL +N M ++
Sbjct: 429 IFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 254 QPNLTIYNS----FINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDE 309
P++ ++S F G S + LVD R + TFN I Y G+ +E
Sbjct: 489 NPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPR---NRDTFNAQIEAYKQGGKFEE 545
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
A +M+ + T ++++ +E +E + M I P + Y ++
Sbjct: 546 AVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLA 605
Query: 370 HFNKKHHPEEVIALHDYMI 388
+ K ++V L + M+
Sbjct: 606 VYGKTERWDDVNELLEEML 624
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 177/383 (46%), Gaps = 5/383 (1%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+ S D+ K ++ ++ M P+ + +++ CK G + A ++ DM + F
Sbjct: 192 RFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPV 250
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
++R + +L+ G+ R G + E+ + +M E G P+IV Y ++L G M +A +L
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 310
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
DM + P+ Y +L + LC+ + EA+K+ ++ +++ D + L++ CK
Sbjct: 311 RDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKW 370
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
MI +GL P T ++ + K + E+ L L M +++ P++ IY
Sbjct: 371 GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY 430
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKS 319
N I CK+ A L +E+ + L TF +I+G ++ G + EA EM +
Sbjct: 431 NVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVT 490
Query: 320 LGL--SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI-RPDCITYTTLITHFNKKHH 376
GL + T L+N + K+ E AK++ + +G + +++T I K +
Sbjct: 491 RGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGY 550
Query: 377 PEEVIALHDYMILKGVIPDQKTY 399
+E + MI +P T+
Sbjct: 551 EKEACSYCIEMIEMDFMPQPDTF 573
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 136/307 (44%), Gaps = 4/307 (1%)
Query: 53 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 112
++ F + A EVL +M K GFEP + L+D + GS++++ +L ++M R
Sbjct: 189 LVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM--RM 246
Query: 113 LFP-NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 171
FP N+ + S+LY R G M EA VL M + PD Y L G G + +A
Sbjct: 247 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 172 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 231
L + + +A +L+ +CK M DV T ++ G
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 232 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-D 290
CK G +K + + MIK P+ Y + K S + L++++R+ + D
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 426
Query: 291 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 350
+N +I G++ EA L EM+ GLS T+ +IN L GC EA + K
Sbjct: 427 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFK 486
Query: 351 MMIMQGI 357
M+ +G+
Sbjct: 487 EMVTRGL 493
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 134/291 (46%), Gaps = 4/291 (1%)
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
EP + + L+ +A +++++ + DEM + G P+ V+ +L L +HG +++A+K
Sbjct: 182 EPEL--FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAK 239
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
+ DM + +Y ++L G CR G + EA + Q+ + D LL+
Sbjct: 240 LFEDMRMRFPVNLRYFTSLLY-GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYA 298
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
+ M RG P+ +I CK+ E+A++++ M + + + ++
Sbjct: 299 NAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVV 358
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEM 317
Y + ++G CK D ++D++ K+ L+ + T+ ++ + +E L +M
Sbjct: 359 TYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM 418
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+ + + YN +I L CK G +EA L M G+ P T+ +I
Sbjct: 419 RQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 130/274 (47%), Gaps = 6/274 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+ CK ++ A+KV +M + + V+Y ++++GFCK G + VL DM
Sbjct: 327 VLIQALCKVDRMEEAMKVFVEMERYECEA---DVVTYTALVSGFCKWGKIDKCYIVLDDM 383
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+K G PS TY ++ + + S EE L L ++M + P+I +YN ++ + G++
Sbjct: 384 IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEV 443
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL--IEDAFSLN 191
+EA ++ ++M + + P ++ I+ GL G L EA +++ L + +L
Sbjct: 444 KEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLK 503
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPP-DVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
+LLN + K + ++G +V + I G ++A MI+
Sbjct: 504 LLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIE 563
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
MD P + + GL K+ + + A + +++R
Sbjct: 564 MDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVR 597
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 122/274 (44%), Gaps = 8/274 (2%)
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
G +EE K +I+ + + +L + + +A+++ +++ KF D +
Sbjct: 168 GLIEEMRKENPQLIEPEL------FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVF 221
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
LL+ +CK M R P ++ +++ G C++G +A + M +
Sbjct: 222 GCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNE 280
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 309
+P++ Y + ++G A +L+ ++R+R +A + LI +++E
Sbjct: 281 AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEE 340
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
A + EM+ A+ VTY L++ CK G ++ ++ MI +G+ P +TY ++
Sbjct: 341 AMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMV 400
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
KK EE + L + M PD Y+ ++
Sbjct: 401 AHEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 35/202 (17%)
Query: 238 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR----------- 286
+KA+ + + M K +P+ ++ ++ LCK S A L +++R R
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSL 258
Query: 287 --------KLLDA----------------TTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 322
K+++A + L+SGY+N+G++ +A+ L +M+ G
Sbjct: 259 LYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGF 318
Query: 323 SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIA 382
N Y LI LCK EEA ++ M D +TYT L++ F K ++
Sbjct: 319 EPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYI 378
Query: 383 LHDYMILKGVIPDQKTYDAIVT 404
+ D MI KG++P + TY I+
Sbjct: 379 VLDDMIKKGLMPSELTYMHIMV 400
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 78/200 (39%), Gaps = 40/200 (20%)
Query: 245 YNGMIKMDEQP----NLTIYNSFINGLCKMASTDVAKNLVDELRKR--KLLDATTFNTLI 298
Y + +QP ++ +Y S + L KM L++E+RK +L++ F L+
Sbjct: 131 YRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLV 190
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ--- 355
++++ + +A + EM G + + L++ LCK+G ++A +L + M M+
Sbjct: 191 QRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV 250
Query: 356 -------------------------------GIRPDCITYTTLITHFNKKHHPEEVIALH 384
G PD + YT L++ + + L
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 310
Query: 385 DYMILKGVIPDQKTYDAIVT 404
M +G P+ Y ++
Sbjct: 311 RDMRRRGFEPNANCYTVLIQ 330
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 170/433 (39%), Gaps = 45/433 (10%)
Query: 9 CIKEWVLLDGACKTGSLDLA---LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 65
C+ ++G C D+A L+ ++ N++ S ++Y ++ G C + +
Sbjct: 252 CVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDL--GIAYRKVVRGLCYEMRIED 309
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDG---------------------------------- 91
AE V+ DM K G +P V Y+ +I+G
Sbjct: 310 AESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQ 369
Query: 92 -YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 150
Y + G+ E+ L E E + + V YN L + G +EEA ++ +M K I P
Sbjct: 370 CYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAP 429
Query: 151 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 210
D +Y L G C G ++A L ++ D N+L + +
Sbjct: 430 DVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETL 489
Query: 211 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 270
M RG+ P T VI+G G +KA Y + E + S + G C
Sbjct: 490 KMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL----EHKSRENDASMVKGFCAA 545
Query: 271 ASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
D A L + L + F S + I +A L M LG+ + Y
Sbjct: 546 GCLDHAFERFIRL-EFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYG 604
Query: 331 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
LI C+ +A+E ++++ + I PD TYT +I + + + P++ AL + M +
Sbjct: 605 KLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRR 664
Query: 391 GVIPDQKTYDAIV 403
V PD TY ++
Sbjct: 665 DVKPDVVTYSVLL 677
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 157/381 (41%), Gaps = 25/381 (6%)
Query: 27 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 86
LA + + + +M V P V++N +I G G L AE + E A
Sbjct: 481 LAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----A 536
Query: 87 TLIDGYARWGSLEESLRLCDEMVERGLFP-NIVVYNSILYWLYRHGD-MEEASKVLSDMI 144
+++ G+ G L+ + E R FP VY ++ L D + +A +L M
Sbjct: 537 SMVKGFCAAGCLDHAF----ERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMW 592
Query: 145 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 204
+ P++ Y L CR + +A + ++ ++ D F+ I++N C+
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 205 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 264
M R + PDV T + ++ N++ L + M D P++ Y I
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMI 705
Query: 265 NGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 323
N C + L ++++R+++ D T+ L+ L+ EMK+ +
Sbjct: 706 NRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN-------LSREMKAFDVK 758
Query: 324 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 383
+ Y LI+ CK G EAK + MI G+ PD YT LI K + +E +
Sbjct: 759 PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMI 818
Query: 384 HDYMILKGVIPDQKTYDAIVT 404
D MI GV PD Y A++
Sbjct: 819 FDRMIESGVKPDVVPYTALIA 839
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 154/389 (39%), Gaps = 55/389 (14%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFC-KKGGLLLAEEVLGDM 73
++ G C G LD A + ++ SV Y ++ C +K + A+++L M
Sbjct: 538 MVKGFCAAGCLDHAFERFIRLEFPLPKSV------YFTLFTSLCAEKDYISKAQDLLDRM 591
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G EP Y LI + R ++ ++ + +V + + P++ Y ++ R +
Sbjct: 592 WKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEP 651
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++A + DM + + PD +Y++L L + ++ FD+I D I+
Sbjct: 652 KQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIM 704
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N C M R + PDV T TV+ N N + ++ + D
Sbjct: 705 INRYCHLNDLKKVYALFKDMKRREIVPDVVT-YTVLLKNKPERNLSREMKAF------DV 757
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL 313
+P++ Y I+ CK+ AK + D+
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQ------------------------------- 786
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M G+ + Y LI CK G +EAK + MI G++PD + YT LI +
Sbjct: 787 ---MIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCR 843
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAI 402
+ + L M+ KG+ P + + A+
Sbjct: 844 NGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL+D CK G L A ++ +M + V P++ Y ++I CK G L A+ + M
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQM---IESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRM 822
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
+++G +P V Y LI G R G + ++++L EM+E+G+ P +++ Y
Sbjct: 823 IESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHY 874
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 133/368 (36%), Gaps = 61/368 (16%)
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA--- 136
PSV+ YAT+I WG ++ E+V RG + S++ L G+ME++
Sbjct: 88 PSVQAYATVIRIVCGWGLDKKLDTFLFELVRRG---DEGRGFSVMDLLKAIGEMEQSLVL 144
Query: 137 -SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
+V + ++ + D + AI + R Y D +LN L++
Sbjct: 145 LIRVSTALVKAYANLDMFDEAI--DIFFRAYY------------SLGRAPDIKALNFLIS 190
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+ S + GL D +T V+ + + E+ +L + ++ + +
Sbjct: 191 RMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRN 250
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-------------------------- 289
Y +FI GLC TD+A L+ LR +L
Sbjct: 251 PCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDA 310
Query: 290 --------------DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
D ++ +I G+ + I +A + +M N V ++++
Sbjct: 311 ESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQC 370
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
C+ G EA +L K I D + Y K EE I L M KG+ PD
Sbjct: 371 YCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPD 430
Query: 396 QKTYDAIV 403
Y ++
Sbjct: 431 VINYTTLI 438
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 141/296 (47%), Gaps = 1/296 (0%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF+ TY T++ R +L DEMV G PN V YN +++ R +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA V + M + PD+ +Y L + + G+L A+ ++ ++ L D F+ ++++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N + K+ M+ +G P++ T ++D + K N + AL+LY M +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P+ Y+ + L + A+ + E++++ + D + L+ + +G +++A+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
M GL N T N+L++ + EA EL++ M+ G+RP TYT L++
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 148/335 (44%), Gaps = 3/335 (0%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
+ M N M P+ V+Y ++I+ K G L +A ++ M G P TY+ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 149
+ + G L + +L EMV++G PN+V YN ++ + + + A K+ DM +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 150 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 209
PD+ +Y+I+ E L GYL EA + ++ + + I D +L++ K+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 210 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
+M+ GL P+V T +++ ++ +A L M+ + +P+L Y ++ C
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCT 655
Query: 270 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQ--IDEAFGLTTEMKSLGLSANRV 327
+ + +L A F + G+ + A M S + R
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRG 715
Query: 328 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
+ +++ L K+G EEA + ++ + + PD +
Sbjct: 716 LVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 35/310 (11%)
Query: 31 VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 90
+ K ++ M + PN+V+YN +I+ + + L A V M +AG +P TY TLID
Sbjct: 383 INKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
Query: 91 GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 150
+A+ G L+ ++ + M GL P+ Y+ I+ L + G + A K+ +M+D+ P
Sbjct: 443 IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 151 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 210
+ +Y I+ + + ALKL+ + D + +I++ +
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 211 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 270
M + PD ++D K GN EKA + Y M+ +PN+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV------------- 609
Query: 271 ASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
T N+L+S + +I EA+ L M +LGL + TY
Sbjct: 610 ---------------------PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY- 647
Query: 331 TLINLLCKNG 340
TL+ C +G
Sbjct: 648 TLLLSCCTDG 657
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKAL-RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
G D +T T++ GN A+ +L + M++ QPN YN I+ + +
Sbjct: 359 GFKHDGHTYTTMV-GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 276 AKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
A N+ +++++ D T+ TLI ++ +G +D A + M++ GLS + TY+ +IN
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
L K G A +L M+ QG P+ +TY ++ K + + + L+ M G P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 395 DQKTYDAIV 403
D+ TY ++
Sbjct: 538 DKVTYSIVM 546
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M+ G P+ T +I + +A+ ++N M + +P+ Y + I+ K
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 273 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
D+A ++ ++ L D T++ +I+ +G + A L EM G + N VTYN
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
+++L K + A +L + M G PD +TY+ ++ + EE A+ M K
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 392 VIPDQKTYDAIV 403
IPD+ Y +V
Sbjct: 570 WIPDEPVYGLLV 581
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 141/296 (47%), Gaps = 1/296 (0%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF+ TY T++ R +L DEMV G PN V YN +++ R +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA V + M + PD+ +Y L + + G+L A+ ++ ++ L D F+ ++++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N + K+ M+ +G P++ T ++D + K N + AL+LY M +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P+ Y+ + L + A+ + E++++ + D + L+ + +G +++A+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
M GL N T N+L++ + EA EL++ M+ G+RP TYT L++
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 148/335 (44%), Gaps = 3/335 (0%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
+ M N M P+ V+Y ++I+ K G L +A ++ M G P TY+ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 149
+ + G L + +L EMV++G PN+V YN ++ + + + A K+ DM +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 150 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 209
PD+ +Y+I+ E L GYL EA + ++ + + I D +L++ K+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 210 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
+M+ GL P+V T +++ ++ +A L M+ + +P+L Y ++ C
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCT 655
Query: 270 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQ--IDEAFGLTTEMKSLGLSANRV 327
+ + +L A F + G+ + A M S + R
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRG 715
Query: 328 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
+ +++ L K+G EEA + ++ + + PD +
Sbjct: 716 LVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 35/310 (11%)
Query: 31 VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 90
+ K ++ M + PN+V+YN +I+ + + L A V M +AG +P TY TLID
Sbjct: 383 INKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
Query: 91 GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 150
+A+ G L+ ++ + M GL P+ Y+ I+ L + G + A K+ +M+D+ P
Sbjct: 443 IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 151 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 210
+ +Y I+ + + ALKL+ + D + +I++ +
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 211 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 270
M + PD ++D K GN EKA + Y M+ +PN+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV------------- 609
Query: 271 ASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
T N+L+S + +I EA+ L M +LGL + TY
Sbjct: 610 ---------------------PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY- 647
Query: 331 TLINLLCKNG 340
TL+ C +G
Sbjct: 648 TLLLSCCTDG 657
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKAL-RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
G D +T T++ GN A+ +L + M++ QPN YN I+ + +
Sbjct: 359 GFKHDGHTYTTMV-GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 276 AKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
A N+ +++++ D T+ TLI ++ +G +D A + M++ GLS + TY+ +IN
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
L K G A +L M+ QG P+ +TY ++ K + + + L+ M G P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 395 DQKTYDAIV 403
D+ TY ++
Sbjct: 538 DKVTYSIVM 546
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M+ G P+ T +I + +A+ ++N M + +P+ Y + I+ K
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 273 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
D+A ++ ++ L D T++ +I+ +G + A L EM G + N VTYN
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
+++L K + A +L + M G PD +TY+ ++ + EE A+ M K
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 392 VIPDQKTYDAIV 403
IPD+ Y +V
Sbjct: 570 WIPDEPVYGLLV 581
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 141/296 (47%), Gaps = 1/296 (0%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF+ TY T++ R +L DEMV G PN V YN +++ R +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA V + M + PD+ +Y L + + G+L A+ ++ ++ L D F+ ++++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N + K+ M+ +G P++ T ++D + K N + AL+LY M +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P+ Y+ + L + A+ + E++++ + D + L+ + +G +++A+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
M GL N T N+L++ + EA EL++ M+ G+RP TYT L++
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 148/335 (44%), Gaps = 3/335 (0%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
+ M N M P+ V+Y ++I+ K G L +A ++ M G P TY+ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 149
+ + G L + +L EMV++G PN+V YN ++ + + + A K+ DM +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 150 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 209
PD+ +Y+I+ E L GYL EA + ++ + + I D +L++ K+
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 210 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
+M+ GL P+V T +++ ++ +A L M+ + +P+L Y ++ C
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCT 655
Query: 270 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQ--IDEAFGLTTEMKSLGLSANRV 327
+ + +L A F + G+ + A M S + R
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRG 715
Query: 328 TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
+ +++ L K+G EEA + ++ + + PD +
Sbjct: 716 LVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 132/310 (42%), Gaps = 35/310 (11%)
Query: 31 VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 90
+ K ++ M + PN+V+YN +I+ + + L A V M +AG +P TY TLID
Sbjct: 383 INKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID 442
Query: 91 GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 150
+A+ G L+ ++ + M GL P+ Y+ I+ L + G + A K+ +M+D+ P
Sbjct: 443 IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP 502
Query: 151 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 210
+ +Y I+ + + ALKL+ + D + +I++ +
Sbjct: 503 NLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 211 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 270
M + PD ++D K GN EKA + Y M+ +PN+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV------------- 609
Query: 271 ASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
T N+L+S + +I EA+ L M +LGL + TY
Sbjct: 610 ---------------------PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY- 647
Query: 331 TLINLLCKNG 340
TL+ C +G
Sbjct: 648 TLLLSCCTDG 657
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKAL-RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
G D +T T++ GN A+ +L + M++ QPN YN I+ + +
Sbjct: 359 GFKHDGHTYTTMV-GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 276 AKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
A N+ +++++ D T+ TLI ++ +G +D A + M++ GLS + TY+ +IN
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
L K G A +L M+ QG P+ +TY ++ K + + + L+ M G P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 395 DQKTYDAIV 403
D+ TY ++
Sbjct: 538 DKVTYSIVM 546
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M+ G P+ T +I + +A+ ++N M + +P+ Y + I+ K
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 273 TDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
D+A ++ ++ L D T++ +I+ +G + A L EM G + N VTYN
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
+++L K + A +L + M G PD +TY+ ++ + EE A+ M K
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 392 VIPDQKTYDAIV 403
IPD+ Y +V
Sbjct: 570 WIPDEPVYGLLV 581
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 156/348 (44%), Gaps = 45/348 (12%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
+S+ +N++IN F + G + A + L M + G P+ TY TLI GY G E S L
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173
Query: 106 DEMVERG---LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
D M+E G + PNI +N ++ + +EEA +V+ M + + PD +Y +
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY 233
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
+ G E ++ +++++ ++++ P+
Sbjct: 234 VQKG---ETVRAESEVVEKMVMKEKAK------------------------------PNG 260
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
T V+ G C+ G LR M +M + NL ++NS ING ++ D +DE
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDG----IDE 316
Query: 283 LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
+ LL +FN + N + L MK + A+ +TY+T++N G
Sbjct: 317 VTLTLLL--MSFNEEVELVGNQKMKVQVLTL---MKECNVKADVITYSTVMNAWSSAGYM 371
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
E+A ++ K M+ G++PD Y+ L + + P++ L + +I++
Sbjct: 372 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE 419
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 179/383 (46%), Gaps = 33/383 (8%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+++ ++G+++ A++ + KM + N P + +YN++I G+ G + E+L M+
Sbjct: 121 VINAFSESGNMEDAVQALLKMKELGLN---PTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 75 KAG---FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
+ G P++RT+ L+ + + +EE+ + +M E G+ P+ V YN+I + G
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 132 DMEEA-SKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKL----------HNQIL 179
+ A S+V+ M+ K P+ + I+ G CR G + + L+ N ++
Sbjct: 238 ETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 180 KFDLIE-----------DAFSLNILLNYICKSXXXXXXXXXXGSMITR----GLPPDVYT 224
LI D +L +LL + ++T + DV T
Sbjct: 298 FNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVIT 357
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+TV++ G EKA +++ M+K +P+ Y+ G + A+ L++ L
Sbjct: 358 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 417
Query: 285 KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
+ F T+ISG+ ++G +D+A + +M G+S N T+ TL+ + +
Sbjct: 418 VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWK 477
Query: 345 AKELMKMMIMQGIRPDCITYTTL 367
A+E+++MM G++P+ T+ L
Sbjct: 478 AEEVLQMMRGCGVKPENSTFLLL 500
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 148/323 (45%), Gaps = 25/323 (7%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE-EVLGD 72
VL+ CK ++ A +V+KKM V P++V+YN+I + +KG + AE EV+
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEEC---GVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 73 MV-KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
MV K +P+ RT ++ GY R G + + LR M E + N+VV+NS++ +G
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI-----NG 304
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF----DLIEDA 187
+E + D ID + + +L L K+ Q+L ++ D
Sbjct: 305 FVEVMDR---DGID------EVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADV 355
Query: 188 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
+ + ++N + M+ G+ PD + + + G + +KA L
Sbjct: 356 ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 415
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 306
+I ++ +PN+ I+ + I+G C S D A + +++ K + + TF TL+ GY Q
Sbjct: 416 LI-VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQ 474
Query: 307 IDEAFGLTTEMKSLGLSANRVTY 329
+A + M+ G+ T+
Sbjct: 475 PWKAEEVLQMMRGCGVKPENSTF 497
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 163/392 (41%), Gaps = 66/392 (16%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA---RWGSLEESLRLC 105
S ++N ++G A+ V + + G PS+ +Y TL+ ++GS+ +
Sbjct: 47 SRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISS---IV 103
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
E+ + G + + +N+++ G+ME+A + L M + + P +Y L +G
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G + +L DL+ + ++++ P++ T
Sbjct: 164 GKPERSSEL------LDLMLEEGNVDV--------------------------GPNIRTF 191
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE--- 282
++ CK E+A + M + +P+ YN+ + T A++ V E
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 283 LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN----LLCK 338
++++ + T ++ GY G++ + MK + + AN V +N+LIN ++ +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 339 NGCDE-----------EAKEL-----MKMMIMQ-----GIRPDCITYTTLITHFNKKHHP 377
+G DE E EL MK+ ++ ++ D ITY+T++ ++ +
Sbjct: 312 DGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYM 371
Query: 378 EEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
E+ + M+ GV PD Y + ++ A
Sbjct: 372 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRA 403
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 34/178 (19%)
Query: 35 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 94
+ LM +V + ++Y++++N + G + A +V +MVKAG +P Y+ L GY R
Sbjct: 343 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 402
Query: 95 -------------------------------W---GSLEESLRLCDEMVERGLFPNIVVY 120
W GS+++++R+ ++M + G+ PNI +
Sbjct: 403 AKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 462
Query: 121 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
++++ +A +VL M + P+ ++ +L E G E+ K N +
Sbjct: 463 ETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 520
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 155/320 (48%), Gaps = 9/320 (2%)
Query: 35 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 94
N+M + PN V++N +++ CK + A+EV +M + F P +TY+ L++G+ +
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGK 249
Query: 95 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQY 153
+L ++ + EM++ G P+IV Y+ ++ L + G ++EA ++ M D IC P +
Sbjct: 250 EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM-DPSICKPTTF 308
Query: 154 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 213
Y++L L EA+ ++ + + D N L+ CK+ M
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 214 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 273
++G+ P+ + ++ + G ++A ++ MIK+ E P+ Y I C+
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE-PDADTYTMVIKMFCEKKEM 427
Query: 274 DVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 332
+ A + +RK+ + + TF+ LI+G +A L EM +G+ + VT+ L
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Query: 333 INLLCKNGCDEEAKELMKMM 352
LL K EE ++++K +
Sbjct: 488 RQLLIK----EEREDVLKFL 503
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 146/324 (45%), Gaps = 38/324 (11%)
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
+V T+ ++ YAR ++E++ + M + L PN+V +N +L L + ++ +A +V
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+M D+ PD +Y+IL EG + L +A ++ +
Sbjct: 227 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFRE----------------------- 262
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
MI G PD+ T + ++D CK G ++AL + M +P IY
Sbjct: 263 ------------MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
+ ++ + A + E+ + + D FN+LI + + ++ + + EMKS
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
G++ N + N ++ L + G +EA ++ + MI + PD TYT +I F +K E
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMET 429
Query: 380 VIALHDYMILKGVIPDQKTYDAIV 403
+ YM KGV P T+ ++
Sbjct: 430 ADKVWKYMRKKGVFPSMHTFSVLI 453
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 5/255 (1%)
Query: 154 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 213
++ I+ R + EA+ N + K+DL + + N LL+ +CKS +M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 214 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 273
R PD T + +++G K N KA ++ MI P++ Y+ ++ LCK
Sbjct: 230 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 274 DVAKNLVDELRKRKLLDATTF--NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
D A +V + + TTF + L+ Y +++EA EM+ G+ A+ +N+
Sbjct: 289 DEALGIVRSMDP-SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNS 347
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
LI CK + ++K M +G+ P+ + ++ H ++ +E + MI K
Sbjct: 348 LIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KV 406
Query: 392 VIPDQKTYDAIVTPF 406
PD TY ++ F
Sbjct: 407 CEPDADTYTMVIKMF 421
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 92/189 (48%)
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 280
+V T V+ + ++A+ +N M K D PNL +N ++ LCK + A+ +
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 281 DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
+ +R R D+ T++ L+ G+ + +A + EM G + VTY+ ++++LCK G
Sbjct: 227 ENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAG 286
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 400
+EA +++ M +P Y+ L+ + ++ EE + M G+ D ++
Sbjct: 287 RVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFN 346
Query: 401 AIVTPFLLA 409
+++ F A
Sbjct: 347 SLIGAFCKA 355
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL 313
+ ++ Y+ I K+ + +L++ +RK+K+L+ TF ++ Y+ + ++DEA
Sbjct: 131 EHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYA 190
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M+ L N V +N L++ LCK+ +A+E+ + M PD TY+ L+ + K
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGK 249
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + + + MI G PD TY +V
Sbjct: 250 EPNLPKAREVFREMIDAGCHPDIVTYSIMV 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ CK + +V+K+M V PNS S N I+ ++G A +V M+
Sbjct: 348 LIGAFCKANRMKNVYRVLKEMK---SKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 404
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K EP TY +I + +E + ++ M ++G+FP++ ++ ++ L +
Sbjct: 405 KVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQ 463
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQ 177
+A +L +MI+ I P ++ L + L + + LK N+
Sbjct: 464 KACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER-EDVLKFLNE 505
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 171/370 (46%), Gaps = 8/370 (2%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
+V K LM + V P+ + I+ G G + + + ++K G +R +++
Sbjct: 164 EVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSIL 223
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 149
YA+ G L+ + + M ER +++ +NS+L ++G EEA +++ +M + I
Sbjct: 224 AVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 150 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 209
P ++ IL G + G A+ L ++ F + D F+ +++ + +
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 210 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
M G+ P+ T + + L + +++ +KM ++ + NS ++ K
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 270 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 329
+ A+ + D ++ + D T+N++I+GY +G +A+ L T M+ L N +T+
Sbjct: 400 CGKLEDARKVFDSVKNK---DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW 456
Query: 330 NTLINLLCKNGCDEEAKELMKMMIMQG-IRPDCITYTTLITHFNKKHHPEEVIALHDYMI 388
NT+I+ KNG + EA +L + M G ++ + T+ +I + + +E + L M
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 389 LKGVIPDQKT 398
+P+ T
Sbjct: 517 FSRFMPNSVT 526
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 148/340 (43%), Gaps = 15/340 (4%)
Query: 33 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY 92
+K NL PN + + + C+ G LL AE+ L + + G + TY L++
Sbjct: 33 RKKNLSFTKKKEPNIIP-DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESC 91
Query: 93 ARWGSLEESLRLCDEMVERGLF--PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 150
GS+ L GLF P++ V +L + G + +A KV M ++++
Sbjct: 92 IDSGSIHLGRIL---HARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL-- 146
Query: 151 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 210
++++ + R E KL ++K ++ D F +L
Sbjct: 147 --FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 211 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 270
+I G+ + +++ K G + A + + M + D + +NS + C+
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD----VIAWNSVLLAYCQN 260
Query: 271 ASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 329
+ A LV E+ K + T+N LI GY+ G+ D A L +M++ G++A+ T+
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 330 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
+I+ L NG +A ++ + M + G+ P+ +T + ++
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 157/366 (42%), Gaps = 15/366 (4%)
Query: 6 SGGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 65
S G + +L+ G + G D A+ +M+KM + + ++ ++I+G G
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETF---GITADVFTWTAMISGLIHNGMRYQ 335
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
A ++ M AG P+ T + + + + + + V+ G +++V NS++
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
+ G +E+A KV + +K D Y++ + G C+ GY +A +L ++ +L
Sbjct: 396 MYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRG-LPPDVYTKATVIDGNCKLGNTEKALRL 244
+ + N +++ K+ M G + + T +I G + G ++AL L
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA--TTFNTLISGYS 302
+ M PN S + + + + + + +R L DA N L Y+
Sbjct: 512 FRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL-DAIHAVKNALTDTYA 570
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
SG I+ + + M++ + +T+N+LI +G A L M QGI P+
Sbjct: 571 KSGDIEYSRTIFLGMETKDI----ITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRG 626
Query: 363 TYTTLI 368
T +++I
Sbjct: 627 TLSSII 632
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 18/308 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSV-SYNSIINGFCKKGGLLLAEEVLGDM 73
L+D K G L+ A KV +SV V ++NS+I G+C+ G A E+ M
Sbjct: 393 LVDMYSKCGKLEDARKVF--------DSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM 444
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG-LFPNIVVYNSILYWLYRHGD 132
A P++ T+ T+I GY + G E++ L M + G + N +N I+ ++G
Sbjct: 445 QDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGK 504
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK-LHNQILKFDLIEDAFSLN 191
+EA ++ M P+ + L C N + ++ +H +L+ +L N
Sbjct: 505 KDEALELFRKMQFSRFMPNSVTILSLLPA-CANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
L + KS M T+ D+ T ++I G G+ AL L+N M
Sbjct: 564 ALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQ 619
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTF-NTLISGYSNSGQIDE 309
PN +S I M + D K + + ++ A + ++ Y + +++E
Sbjct: 620 GITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEE 679
Query: 310 AFGLTTEM 317
A EM
Sbjct: 680 ALQFIQEM 687
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 139/318 (43%), Gaps = 4/318 (1%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
K GS+D A+ V K+ T S N++IN G L A+ P
Sbjct: 128 KAGSVDKAIDVFHKI---TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRP 184
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
+ ++ LI G+ E + ++ DEM+E + P++V YNS++ +L R+ DM +A +L
Sbjct: 185 NSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLL 244
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
DMI K I P+ ++ +L +GLC G EA KL + + IL++ + K
Sbjct: 245 EDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKR 304
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
G M R + PDV +++ C +A R+ M +PN Y
Sbjct: 305 GRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATY 364
Query: 261 NSFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
I+G C++ D N+++ L R TF +++G G +D A + M
Sbjct: 365 RMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGK 424
Query: 320 LGLSANRVTYNTLINLLC 337
LS + L++ LC
Sbjct: 425 KNLSFGSGAWQNLLSDLC 442
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 149/309 (48%), Gaps = 1/309 (0%)
Query: 99 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
EE+L L + E G + Y+S++Y L + + + ++L + +++ + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
+ + G + +A+ + ++I FD + SLN L+N + + L
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
P+ + +I G + E A ++++ M++M+ QP++ YNS I LC+ AK+
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 279 LVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
L++++ K+++ +A TF L+ G G+ +EA L +M+ G V Y L++ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
K G +EAK L+ M + I+PD + Y L+ H + E + M +KG P+
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 398 TYDAIVTPF 406
TY ++ F
Sbjct: 363 TYRMMIDGF 371
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 138/312 (44%), Gaps = 4/312 (1%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
AL + + M +P SY+S+I K +++L + +
Sbjct: 65 ALSLFHQYQEMGFRHDYP---SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
LI Y + GS+++++ + ++ I N+++ L +G++E+A D
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
+ P+ S+ IL +G A K+ +++L+ ++ + N L+ ++C++
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
MI + + P+ T ++ G C G +A +L M +P L Y ++ L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 268 CKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANR 326
K D AK L+ E++KR++ D +N L++ ++ EA+ + TEM+ G N
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 327 VTYNTLINLLCK 338
TY +I+ C+
Sbjct: 362 ATYRMMIDGFCR 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 38/275 (13%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G + A KV +M M V P+ V+YNS+I C+ + A+ +L DM
Sbjct: 191 ILIKGFLDKCDWEAACKVFDEMLEM---EVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDM 247
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+K P+ T+ L+ G G E+ +L +M RG P +V Y ++ L + G +
Sbjct: 248 IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRI 307
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA +L +M + I PD Y IL LC + EA ++ +
Sbjct: 308 DEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTE---------------- 351
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
M +G P+ T +IDG C++ + + L + N M+
Sbjct: 352 -------------------MQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRH 392
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
P + + GL K + D A +++ + K+ L
Sbjct: 393 CPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 126/247 (51%), Gaps = 1/247 (0%)
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M ++ + V ++D + G+ + L EM E+G+FPN++ YN ++ G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+A ++L MI+K I PD +++ L + ++EA +++ ++L++ + + N
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
+++ CK SM ++G PDV T +T+I+G CK + + ++ M +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
N Y + I+G C++ D A++L++E+ + D TF+ +++G + ++ +AF
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 312 GLTTEMK 318
+ +++
Sbjct: 241 AILEDLQ 247
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M HI D + + LC++G A L ++ + + + + N +++ C S
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
MI + + PD+ T + +I+ K +A +Y M++ P YNS
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
I+G CK D AK ++D + + D TF+TLI+GY + ++D + EM G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
+ AN VTY TLI+ C+ G + A++L+ MI G+ PD IT+ ++ K +
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 382 AL 383
A+
Sbjct: 241 AI 242
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 120/250 (48%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + + + V +I++ CK G + A+ + +M + G P+V TY +ID + G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++ +L M+E+ + P+IV +++++ + + EA ++ +M+ I P +Y
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ +G C+ + +A ++ + + D + + L+N CK+ M RG
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ + T T+I G C++G+ + A L N MI P+ ++ + GLC A
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 278 NLVDELRKRK 287
++++L+K +
Sbjct: 241 AILEDLQKSE 250
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
+++ +CK M +G+ P+V T +ID C G A +L MI+
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAF 311
P++ +++ IN K A+ + E+ + + T T+N++I G+ ++D+A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
+ M S G S + VT++TLIN CK + E+ M +GI + +TYTTLI F
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTY 399
+ + L + MI GV PD T+
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITF 223
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ DV ++D CK GN A L+ M + PN+ YN I+ C A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L+ + ++++ D TF+ LI+ + ++ EA + EM + +TYN++I+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK ++AK ++ M +G PD +T++TLI + K + + + M +G++ +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 397 KTYDAIVTPF 406
TY ++ F
Sbjct: 186 VTYTTLIHGF 195
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
+ ++ I + ++ LCK + A+NL E+ ++ + + T+N +I + +SG+ +A
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L M ++ + VT++ LIN K EA+E+ K M+ I P ITY ++I F
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
K+ ++ + D M KG PD T+ ++ + A
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA 163
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 169/388 (43%), Gaps = 6/388 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D C+ G + ++ + M+L +V +Y +I+ C+ A ++ M
Sbjct: 278 LVDSMCREGYFNDIFEIAENMSLCESVNV---EFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G +P +Y +I G + G + +L +E E FP+ Y ++ L + D
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A VL M+ K Y I GLC TE L + +L+ D D ++LN ++
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 195 NYICKSXXXXXXXXXXGSMIT-RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
N +CK M+T + PD T TV+ G G E+AL + N ++ ++
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 254 -QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
+P + YN+ I GL K+ D A ++ +L K + D+TT+ +I G + ++D A
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAK 574
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
++ + Y + LC++G +A + + G P+ + Y T+I
Sbjct: 575 KFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAEC 634
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTY 399
++ E + + M G PD T+
Sbjct: 635 SRSGLKREAYQILEEMRKNGQAPDAVTW 662
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 150/335 (44%), Gaps = 5/335 (1%)
Query: 37 LMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWG 96
+M + P SYN+II+G CK GG + A ++L + + F PS TY L++ +
Sbjct: 332 IMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKEL 391
Query: 97 SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYA 156
++ + + M+ + +YN L L + E VL M+ PD+Y+
Sbjct: 392 DTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN 451
Query: 157 ILTEGLCRNGYLTEALKLHNQIL--KFDLIEDAFSLN-ILLNYICKSXXXXXXXXXXGSM 213
+ GLC+ G + +A+K+ + ++ KF DA +LN ++ + + M
Sbjct: 452 TVINGLCKMGRVDDAMKVLDDMMTGKF-CAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Query: 214 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 273
+ P V VI G KL ++A+ ++ + K + T Y I+GLC
Sbjct: 511 PENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Query: 274 DVAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 332
D+AK D+ + DA + + G SG + +A ++ G N V YNT+
Sbjct: 571 DMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTV 630
Query: 333 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
I ++G EA ++++ M G PD +T+ L
Sbjct: 631 IAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 174/402 (43%), Gaps = 43/402 (10%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+ +YN ++N C ++ A +++ DM G P V T+ TLI GY LE + ++
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI-----DKHICPDQYSYAILT 159
DEM G+ PN + + ++ + D+E K++ ++ + ++A L
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
+ +CR GY + ++ + + + F+ +++ +C+ M ++GL
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 220 PDVYTKATVIDGNCKLG-----------------------------------NTEKALRL 244
P + +I G CK G +T KA +
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVAKNLVDELRKRKLLDATTFNTLISGYSN 303
M++ + IYN ++ GLC M + T++ LV L+ D T NT+I+G
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 304 SGQIDEAFGLTTEMKSLGLSA-NRVTYNTLINLLCKNGCDEEAKELM-KMMIMQGIRPDC 361
G++D+A + +M + A + VT NT++ L G EEA +++ ++M I+P
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGV 519
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ Y +I K H +E +++ + V D TY I+
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIII 561
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 10/279 (3%)
Query: 99 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
+E+LR+ D + RG P+ + +S+++ L G +EA + + PD+ + ++
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 159 TEGLCRNGYLTEALKLHNQILKF--DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR 216
L + L + ++++ F + + + N L+N +C M R
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
G PDV T T+I G C++ E A ++++ M +PN + I G KM +
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 277 KNLVDEL------RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN-RVTY 329
+ L+ EL + A F L+ G ++ F + M SL S N Y
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM-SLCESVNVEFAY 310
Query: 330 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+I+ LC+ + A ++ +M +G++P +Y +I
Sbjct: 311 GHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAII 349
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 18 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 77
G G + AL V+ + +M N + P V+YN++I G K A V G + KA
Sbjct: 492 GLLAQGRAEEALDVLNR--VMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKAS 549
Query: 78 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 137
TYA +IDG ++ + + D+++ + VY + L L + G + +A
Sbjct: 550 VTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDAC 609
Query: 138 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
L D+ D P+ Y + R+G EA ++ ++ K DA + IL
Sbjct: 610 HFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWP----NSVSYNSIINGFCKKGGLLLAEEV 69
+++DG C T +D+A K + +WP ++ Y + + G C+ G L A
Sbjct: 559 IIIDGLCVTNKVDMAKKFWDDV-------IWPSGRHDAFVYAAFLKGLCQSGYLSDACHF 611
Query: 70 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
L D+ +G P+V Y T+I +R G E+ ++ +EM + G P+ V + IL L+
Sbjct: 612 LYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWR-ILDKLHD 670
Query: 130 HGDMEEASKVLSD 142
D+ +++S+
Sbjct: 671 SMDLTVERELISN 683
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 237 NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA-KNLVDELRKRKLLDATTFN 295
N ++ALR+ +G+ +P+ +S I+ LC D A + + L + D T N
Sbjct: 70 NPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCN 129
Query: 296 TLISG--YSNS-----GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
+I+ YS S G I G E + YN L+N LC +A +L
Sbjct: 130 VIIARLLYSRSPVSTLGVIHRLIGFKKE-----FVPSLTNYNRLMNQLCTIYRVIDAHKL 184
Query: 349 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
+ M +G PD +T+TTLI + + E + D M + G+ P+ T ++ FL
Sbjct: 185 VFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFL 243
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 149/325 (45%), Gaps = 38/325 (11%)
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P+ + +I+ + R +L + DEM + + NS+L L + G++E+ +
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
LS ID+ PD +Y IL G ++G +ALKL ++
Sbjct: 141 LSS-IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDE---------------------- 177
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM-DEQPNLT 258
M+ + + P T T+I G CK ++AL++ + M+K+ +P +
Sbjct: 178 -------------MVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVH 224
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEM 317
IY S I LC++ A L DE + K+ +DA ++TLIS +G+ +E + EM
Sbjct: 225 IYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEM 284
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 377
G + VTYN LIN C E A ++ M+ +G++PD I+Y ++ F +
Sbjct: 285 SEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKW 344
Query: 378 EEVIALHDYMILKGVIPDQKTYDAI 402
EE L + M +G PD +Y +
Sbjct: 345 EEATYLFEDMPRRGCSPDTLSYRIV 369
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 4/301 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G ++G D ALK+ +M V P V++ ++I+G CK + A ++ DM
Sbjct: 157 ILIHGCSQSGCFDDALKLFDEM---VKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 74 VKA-GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
+K G P+V YA+LI + G L + +L DE E + + +Y++++ L + G
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
E S +L +M +K PD +Y +L G C A ++ +++++ L D S N+
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
+L + M RG PD + V DG C+ E+A + + M+
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG 312
+P F+ LC+ ++ ++ L + DA ++ +I I ++
Sbjct: 394 YKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEPVISDSID 453
Query: 313 L 313
L
Sbjct: 454 L 454
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 162/367 (44%), Gaps = 44/367 (11%)
Query: 35 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 94
++L T + P + + ++IN F + A + +M + + +V++ +L+ +
Sbjct: 71 LHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLK 130
Query: 95 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 154
G LE+ + E G P+ YN +++ + G ++A K+ +M+ K + P +
Sbjct: 131 CGELEKMKERLSSIDEFGK-PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT 189
Query: 155 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
+ L GLC++ + EALK+ + +LK
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLK---------------------------------- 215
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRL----YNGMIKMDEQPNLTIYNSFINGLCKM 270
G+ P V+ A++I C++G A +L Y G IK+D IY++ I+ L K
Sbjct: 216 VYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDA----AIYSTLISSLIKA 271
Query: 271 ASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 329
++ +++E+ ++ D T+N LI+G+ + A + EM GL + ++Y
Sbjct: 272 GRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISY 331
Query: 330 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 389
N ++ + + EEA L + M +G PD ++Y + + EE + D M+
Sbjct: 332 NMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLF 391
Query: 390 KGVIPDQ 396
KG P +
Sbjct: 392 KGYKPRR 398
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 138/284 (48%), Gaps = 3/284 (1%)
Query: 59 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 118
K G L +E L + + G +P TY LI G ++ G +++L+L DEMV++ + P V
Sbjct: 130 KCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQ 177
+ ++++ L + ++EA K+ DM+ + + P + YA L + LC+ G L+ A KL ++
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE 248
Query: 178 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 237
+ + DA + L++ + K+ M +G PD T +I+G C +
Sbjct: 249 AYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEND 308
Query: 238 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNT 296
+E A R+ + M++ +P++ YN + ++ + A L +++ +R D ++
Sbjct: 309 SESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRI 368
Query: 297 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
+ G Q +EA + EM G R + LC++G
Sbjct: 369 VFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESG 412
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PD T +I G + G + AL+L++ M+K +P + + I+GLCK + A +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 280 VDELRKRKLLDATT--FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
++ K + T + +LI G++ AF L E + + Y+TLI+ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
K G E +++ M +G +PD +TY LI F ++ E + D M+ KG+ PD
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 398 TYDAIVTPFL 407
+Y+ I+ F
Sbjct: 330 SYNMILGVFF 339
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 165/382 (43%), Gaps = 45/382 (11%)
Query: 27 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 86
LA+++ + G+ V YN+++ + + G A+E++ M + G P + ++
Sbjct: 209 LAVEIFTRAEPTVGDRV----QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFN 264
Query: 87 TLIDGYARWGSLEESL--RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 144
TLI+ + G L +L L D + GL P+ + YN++L R +++ A KV DM
Sbjct: 265 TLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM- 323
Query: 145 DKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 203
+ H C PD ++Y + R G EA +L ++ +L
Sbjct: 324 EAHRCQPDLWTYNAMISVYGRCGLAAEAERL---FMELEL-------------------- 360
Query: 204 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 263
+G PD T +++ + NTEK +Y M KM + YN+
Sbjct: 361 ------------KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 264 INGLCKMASTDVAKNLVDELR--KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
I+ K D+A L +++ + DA T+ LI + + EA L +EM +G
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
+ TY+ LI K G EEA++ M+ G +PD + Y+ ++ + + +
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Query: 382 ALHDYMILKGVIPDQKTYDAIV 403
L+ MI G P Y+ ++
Sbjct: 529 GLYRDMISDGHTPSYTLYELMI 550
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 147/335 (43%), Gaps = 11/335 (3%)
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERG---LFPNIVVYNSILYWLYRHGDMEEA 136
P+ R A ++ RW +ESL + E+ R + + VYN+++ R G +A
Sbjct: 189 PNARMVAAILGVLGRWN--QESLAV--EIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKA 244
Query: 137 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE--ALKLHNQILKFDLIEDAFSLNILL 194
+++ M + PD S+ L ++G LT A++L + + L DA + N LL
Sbjct: 245 QELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLL 304
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ + M PD++T +I + G +A RL+ +
Sbjct: 305 SACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFF 364
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
P+ YNS + + +T+ K + +++K D T+NT+I Y GQ+D A L
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQL 424
Query: 314 TTEMKSL-GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
+MK L G + + +TY LI+ L K EA LM M+ GI+P TY+ LI +
Sbjct: 425 YKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYA 484
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
K EE M+ G PD Y ++ L
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 168/364 (46%), Gaps = 7/364 (1%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
CK G + A +V+ + T + S Y II + K+ AE V+G++ ++G
Sbjct: 727 CKLGFPETAHQVVNQAE--TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRT 784
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P ++T+ +L+ YA+ G E + + + M+ G P + N +L+ L G +EE V
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
+ ++ D + S ++ + R G + E K+++ + + +++ +CK
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
M ++ +++ + + +K +++Y + + +P+ T
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT 964
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKL---LDATTFNTLISGYSNSGQIDEAFGLTTE 316
YN+ I C+ + L+ ++R L LD T+ +LIS + +++A L E
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLD--TYKSLISAFGKQKCLEQAEQLFEE 1022
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
+ S GL +R Y+T++ + +G D +A++L++MM GI P T L+ ++ +
Sbjct: 1023 LLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGN 1082
Query: 377 PEEV 380
P+E
Sbjct: 1083 PQEA 1086
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 164/403 (40%), Gaps = 73/403 (18%)
Query: 8 GCIKEWV----LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL 63
GC+ + + L++ K+G L L V + ++++ + + P++++YN++++ + L
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAV-ELLDMVRNSGLRPDAITYNTLLSACSRDSNL 313
Query: 64 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 123
A +V DM +P + TY +I Y R G E+ RL E+ +G FP+ V YNS+
Sbjct: 314 DGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSL 373
Query: 124 LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD- 182
LY R + E+ +V M D+ +Y + + G L AL+L+ +
Sbjct: 374 LYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSG 433
Query: 183 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLG------ 236
DA + +L++ + K+ M+ G+ P + T + +I G K G
Sbjct: 434 RNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAE 493
Query: 237 -----------------------------NTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
T KA LY MI P+ T+Y I GL
Sbjct: 494 DTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGL 553
Query: 268 CKM-ASTDVAKNLVD----------------------ELRKRKL---------LDATTFN 295
K S D+ K + D +L R+L L+ T
Sbjct: 554 MKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLL 613
Query: 296 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
+++ YS+SG+ EAF L +K + R+ LI L CK
Sbjct: 614 SILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCK 656
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 146/340 (42%), Gaps = 2/340 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL-FPNIVVYNSIL 124
A +V D+ +G E S +++ Y + G E + ++ ++ +G F +Y I+
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDII 759
Query: 125 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 184
+ ++A V+ ++ PD ++ L + G A + N +++
Sbjct: 760 EAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPS 819
Query: 185 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 244
S+NILL+ +C + G + ++D + GN + ++
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSN 303
Y+ M P + +Y I LCK A+ +V E+ + ++ +N+++ Y+
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 304 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
+ + +K GL + TYNTLI + C++ EE LM+ M G+ P T
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 364 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
Y +LI+ F K+ E+ L + ++ KG+ D+ Y ++
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 173/396 (43%), Gaps = 22/396 (5%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
K G LDLAL++ K M ++G + P++++Y +I+ K + A ++ +M+ G +P
Sbjct: 414 KQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
+++TY+ LI GYA+ G EE+ M+ G P+ + Y+ +L L R + +A +
Sbjct: 472 TLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLY 531
Query: 141 SDMIDKHICPDQYSYAILTEGLC---RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 197
DMI P Y ++ GL R+ + + ++ ++ + +E + + +
Sbjct: 532 RDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLE-------ISSVL 584
Query: 198 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 257
K IT G + T +++ G +A L + +
Sbjct: 585 VKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKR 644
Query: 258 TIYNSFINGLCKMASTDVAKNLVDELRKRKLL------DATTFNTLISGYSNSGQIDEAF 311
I + I CK+ + A +DE + +T + TL+ + EA
Sbjct: 645 LITEALIVLHCKVNNLSAA---LDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEAS 701
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT-YTTLITH 370
+ ++++ G A+ +++ + CK G E A +++ +G C YT +I
Sbjct: 702 QVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEA 761
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ K+ ++ ++ + G PD KT++++++ +
Sbjct: 762 YGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAY 797
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 131/341 (38%), Gaps = 39/341 (11%)
Query: 104 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 163
D V F + +Y ++L+ + EAS+V SD+ + + C
Sbjct: 668 FADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYC 727
Query: 164 RNGYLTEALKLHNQILK--FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 221
+ G+ A ++ NQ F +I+ Y K G++ G PD
Sbjct: 728 KLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAY-GKQKLWQKAESVVGNLRQSGRTPD 786
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
+ T +++ + G E+A ++N M++ P + N ++ LC + +V+
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVE 846
Query: 282 ELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
EL+ + ++ ++ ++ +G I E + + MK+ G Y +I LLCK
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 341 CDEEAK-------------------ELMKM-----------MIMQ-----GIRPDCITYT 365
+A+ ++KM + Q G+ PD TY
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYN 966
Query: 366 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
TLI + + PEE L M G+ P TY ++++ F
Sbjct: 967 TLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 152/357 (42%), Gaps = 40/357 (11%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
+YN++I K L ++ DM KA S T+A + YAR ++E++ +M
Sbjct: 130 NYNALIESLGKIKQFKLIWSLVDDM-KAKKLLSKETFALISRRYARARKVKEAIGAFHKM 188
Query: 109 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 168
E G +N +L L + ++ +A KV M K PD SY IL EG +
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQE--- 245
Query: 169 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
LN+L M G PDV +
Sbjct: 246 ---------------------LNLL-----------RVDEVNREMKDEGFEPDVVAYGII 273
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
I+ +CK E+A+R +N M + + +P+ I+ S INGL + A + +
Sbjct: 274 INAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGF 333
Query: 289 -LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
L+A T+N L+ Y S ++++A+ EM+ G+ N TY+ +++ L + +EA E
Sbjct: 334 PLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYE 393
Query: 348 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+ + M P TY ++ F K + I + D M KGV+P + +++T
Sbjct: 394 VYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLIT 447
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 136/310 (43%), Gaps = 10/310 (3%)
Query: 47 SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD 106
S +N +++ K + A++V M K FEP +++Y L++G WG LR+ +
Sbjct: 197 SSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG---WGQELNLLRVDE 253
Query: 107 ---EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 163
EM + G P++V Y I+ + EEA + ++M ++ P + + L GL
Sbjct: 254 VNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLG 313
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 223
L +AL+ + +A + N L+ C S M +G+ P+
Sbjct: 314 SEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNAR 373
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
T ++ ++ +++A +Y M +P ++ Y + C D+A + DE+
Sbjct: 374 TYDIILHHLIRMQRSKEAYEVYQT---MSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEM 430
Query: 284 RKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
+ + +L F++LI+ + ++DEA EM +G+ ++ L L G
Sbjct: 431 KGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRK 490
Query: 343 EEAKELMKMM 352
++ +L+ M
Sbjct: 491 DKVTDLVVKM 500
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 1/290 (0%)
Query: 68 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 127
+VL D +K F P++ TY L++G+ R +L E+ R+ ++M+++GL P+IV +N +L L
Sbjct: 284 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGL 343
Query: 128 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 187
R +A K+ M K CP+ SY I+ C+ + A++ + ++ L DA
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 188 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
L+ M +G PPD T +I E A R+YN
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 306
MI+ + +P++ +N + + ++ + + +E+ K+ + D ++ LI G G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
EA EM G+ + YN + G E +EL + G
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 144/337 (42%), Gaps = 17/337 (5%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF RTY +++ A+ E + + +EM +GL + + + + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGL-CRNGYLTEA-LKLHNQILKFDLIEDAFSLN- 191
+A + M +Y + I E + C L A L Q+L FD +++ F+ N
Sbjct: 247 KAVGIFELM-------KKYKFKIGVETINCLLDSLGRAKLGKEAQVL-FDKLKERFTPNM 298
Query: 192 ----ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
+LLN C+ MI +GL PD+ +++G + A++L++
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 358
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 306
M PN+ Y I CK +S + A D++ L DA + LI+G+ +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
+D + L EM+ G + TYN LI L+ E A + MI I P T+
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNM 478
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
++ + + E A+ + MI KG+ PD +Y ++
Sbjct: 479 IMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLI 515
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 120/271 (44%), Gaps = 3/271 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VLL+G C+ +L A ++ N M + P+ V++N ++ G + A ++ M
Sbjct: 303 VLLNGWCRVRNLIEAARIW---NDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G P+VR+Y +I + + S+E ++ D+MV+ GL P+ VY ++ +
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ ++L +M +K PD +Y L + + A +++N++++ ++ + N++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ + MI +G+ PD + +I G G + +A R M+
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+ L YN F + ++ + L +
Sbjct: 540 KTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 130/290 (44%), Gaps = 1/290 (0%)
Query: 68 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 127
+VL D +K F P++ TY L++G+ R +L E+ R+ ++M++ GL P+IV +N +L L
Sbjct: 283 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 342
Query: 128 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 187
R +A K+ M K CP+ SY I+ C+ + A++ + ++ L DA
Sbjct: 343 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 402
Query: 188 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
L+ M +G PPD T +I E R+YN
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 306
MI+ + +P++ +N + + ++ + + DE+ K+ + D ++ LI G + G+
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
EA EM G+ + YN + G E +EL + G
Sbjct: 523 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 572
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 142/337 (42%), Gaps = 17/337 (5%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF RTY +++ A+ E + + +EM +GL + + + + +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 245
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGL-CRNGYLTEA-LKLHNQILKFDLIEDAFSLN- 191
+A + M +Y + I E + C L A L Q+L FD +++ F+ N
Sbjct: 246 KAVGIFELM-------KKYKFKIGVETINCLLDSLGRAKLGKEAQVL-FDKLKERFTPNM 297
Query: 192 ----ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
+LLN C+ MI GL PD+ +++G + A++L++
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 357
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 306
M PN+ Y I CK +S + A D++ L DA + LI+G+ +
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 417
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
+D + L EM+ G + TYN LI L+ E + MI I P T+
Sbjct: 418 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 477
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
++ + + E A+ D MI KG+ PD +Y ++
Sbjct: 478 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLI 514
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 120/271 (44%), Gaps = 3/271 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VLL+G C+ +L A ++ N M + + P+ V++N ++ G + A ++ M
Sbjct: 302 VLLNGWCRVRNLIEAARIW---NDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G P+VR+Y +I + + S+E ++ D+MV+ GL P+ VY ++ +
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ ++L +M +K PD +Y L + + +++N++++ ++ + N++
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ + MI +G+ PD + +I G G + +A R M+
Sbjct: 479 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+ L YN F + ++ + L +
Sbjct: 539 KTPLIDYNKFAADFHRGGQPEIFEELAQRAK 569
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 130/290 (44%), Gaps = 1/290 (0%)
Query: 68 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 127
+VL D +K F P++ TY L++G+ R +L E+ R+ ++M++ GL P+IV +N +L L
Sbjct: 284 QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 343
Query: 128 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 187
R +A K+ M K CP+ SY I+ C+ + A++ + ++ L DA
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 188 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
L+ M +G PPD T +I E R+YN
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 306
MI+ + +P++ +N + + ++ + + DE+ K+ + D ++ LI G + G+
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
EA EM G+ + YN + G E +EL + G
Sbjct: 524 SREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 17/337 (5%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF + RTY +++ A+ E + + +EM +GL + + + + +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGL-CRNGYLTEA-LKLHNQILKFDLIEDAFSLN- 191
+A + M +Y + I E + C L A L Q+L FD +++ F+ N
Sbjct: 247 KAVGIFELM-------KKYKFKIGVETINCLLDSLGRAKLGKEAQVL-FDKLKERFTPNM 298
Query: 192 ----ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
+LLN C+ MI GL PD+ +++G + A++L++
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 358
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQ 306
M PN+ Y I CK +S + A D++ L DA + LI+G+ +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
+D + L EM+ G + TYN LI L+ E + MI I P T+
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 478
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
++ + + E A+ D MI KG+ PD +Y ++
Sbjct: 479 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLI 515
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 120/271 (44%), Gaps = 3/271 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VLL+G C+ +L A ++ N M + + P+ V++N ++ G + A ++ M
Sbjct: 303 VLLNGWCRVRNLIEAARIW---NDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G P+VR+Y +I + + S+E ++ D+MV+ GL P+ VY ++ +
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ ++L +M +K PD +Y L + + +++N++++ ++ + N++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ + MI +G+ PD + +I G G + +A R M+
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+ L YN F + ++ + L +
Sbjct: 540 KTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 166/390 (42%), Gaps = 15/390 (3%)
Query: 27 LALKVMKKMNLMTGNSVWP--------NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 78
+ K +KK NL++ W + + + +I + K G AE VL + K G
Sbjct: 118 VRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGS 177
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
P+V +Y L++ Y R G + + M G P+ + Y IL +EA +
Sbjct: 178 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 237
Query: 139 VLSDMIDKH---ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
V ++D+ + PDQ Y ++ + G +A K+ + ++ + + + N L++
Sbjct: 238 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 297
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+ M + PDV + A +I + E+AL ++ M+ +P
Sbjct: 298 F---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 354
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLT 314
YN ++ + AK + +R+ ++ D ++ T++S Y N+ ++ A
Sbjct: 355 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 414
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 374
+K G N VTY TLI K E+ E+ + M + GI+ + TT++ +
Sbjct: 415 KRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRC 474
Query: 375 HHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+ + + M GV PDQK + +++
Sbjct: 475 KNFGSALGWYKEMESCGVPPDQKAKNVLLS 504
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 156/355 (43%), Gaps = 18/355 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV---L 70
L++ + G + A + ++M + P++++Y I+ F + AEEV L
Sbjct: 186 ALMESYGRGGKCNNAEAIFRRMQ---SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 71 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
D K+ +P + Y +I Y + G+ E++ ++ MV +G+ + V YNS++ +
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---E 299
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
+E SK+ M I PD SYA+L + R EAL + ++L + +
Sbjct: 300 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 359
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
NILL+ S SM + PD+++ T++ + E A + + IK
Sbjct: 360 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK-RIK 418
Query: 251 MDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
+D +PN+ Y + I G K + + +++R + + T T++
Sbjct: 419 VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFG 478
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
A G EM+S G+ ++ N L++L EEAKEL GIR + T
Sbjct: 479 SALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELT------GIRNETAT 527
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 127/326 (38%), Gaps = 36/326 (11%)
Query: 85 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 144
+ LI Y + G+ + R+ + + G PN++ Y +++ R G A + M
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 145 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 204
P +Y I+ + EA ++ +L
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL------------------------- 243
Query: 205 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 264
L PD +I K GN EKA ++++ M+ + YNS +
Sbjct: 244 -------DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM 296
Query: 265 NGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 323
+ + + +V+K + D++++ + D ++ LI Y + + +EA + EM G+
Sbjct: 297 S--FETSYKEVSK-IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVR 353
Query: 324 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 383
YN L++ +G E+AK + K M I PD +YTT+++ + E
Sbjct: 354 PTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKF 413
Query: 384 HDYMILKGVIPDQKTYDAIVTPFLLA 409
+ + G P+ TY ++ + A
Sbjct: 414 FKRIKVDGFEPNIVTYGTLIKGYAKA 439
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 166/390 (42%), Gaps = 15/390 (3%)
Query: 27 LALKVMKKMNLMTGNSVWP--------NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 78
+ K +KK NL++ W + + + +I + K G AE VL + K G
Sbjct: 111 VRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGS 170
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
P+V +Y L++ Y R G + + M G P+ + Y IL +EA +
Sbjct: 171 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 230
Query: 139 VLSDMIDKH---ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
V ++D+ + PDQ Y ++ + G +A K+ + ++ + + + N L++
Sbjct: 231 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 290
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+ M + PDV + A +I + E+AL ++ M+ +P
Sbjct: 291 F---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRP 347
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLT 314
YN ++ + AK + +R+ ++ D ++ T++S Y N+ ++ A
Sbjct: 348 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFF 407
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 374
+K G N VTY TLI K E+ E+ + M + GI+ + TT++ +
Sbjct: 408 KRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRC 467
Query: 375 HHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+ + + M GV PDQK + +++
Sbjct: 468 KNFGSALGWYKEMESCGVPPDQKAKNVLLS 497
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 156/355 (43%), Gaps = 18/355 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV---L 70
L++ + G + A + ++M + P++++Y I+ F + AEEV L
Sbjct: 179 ALMESYGRGGKCNNAEAIFRRMQ---SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 71 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
D K+ +P + Y +I Y + G+ E++ ++ MV +G+ + V YNS++ +
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---E 292
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
+E SK+ M I PD SYA+L + R EAL + ++L + +
Sbjct: 293 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
NILL+ S SM + PD+++ T++ + E A + + IK
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK-RIK 411
Query: 251 MDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
+D +PN+ Y + I G K + + +++R + + T T++
Sbjct: 412 VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFG 471
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
A G EM+S G+ ++ N L++L EEAKEL GIR + T
Sbjct: 472 SALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELT------GIRNETAT 520
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 126/323 (39%), Gaps = 36/323 (11%)
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
LI Y + G+ + R+ + + G PN++ Y +++ R G A + M
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
P +Y I+ + EA ++ +L
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLL---------------------------- 236
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
L PD +I K GN EKA ++++ M+ + YNS ++
Sbjct: 237 ----DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS-- 290
Query: 268 CKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANR 326
+ + +V+K + D++++ + D ++ LI Y + + +EA + EM G+
Sbjct: 291 FETSYKEVSK-IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTH 349
Query: 327 VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDY 386
YN L++ +G E+AK + K M I PD +YTT+++ + E
Sbjct: 350 KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Query: 387 MILKGVIPDQKTYDAIVTPFLLA 409
+ + G P+ TY ++ + A
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKA 432
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 142/309 (45%), Gaps = 1/309 (0%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
SY+ ++ F + G ++ +MV+ GF + RT+ LI G ++++ +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 109 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 168
P YN+IL L + V M++ PD +Y IL R G +
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 169 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
+L +++ + D+++ NILL+ + K M G+ P V T+
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-KRK 287
IDG + GN E + M+K +P++ Y I G D AK + E+ K +
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 288 LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
L + T+N++I G +G+ EA L EM+S G + N V Y+TL++ L K G EA++
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 348 LMKMMIMQG 356
+++ M+ +G
Sbjct: 451 VIREMVKKG 459
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 143/329 (43%), Gaps = 9/329 (2%)
Query: 78 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 137
F +V +Y L+ +A G + RL DEMV+ G +N ++ G ++A
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 138 KVLSDMIDKHICPDQYSY-AILTEGLCRNGY-LTEALKLHNQILKFDLIEDAFSLNILLN 195
+ P ++SY AIL L Y L E + + Q+L+ D + NILL
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWV--YKQMLEDGFSPDVLTYNILLW 262
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
+ M G PD YT ++ K AL N M ++ P
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLT 314
++ Y + I+GL + + + K +DE+ K D + +I+GY SG++D+A +
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMF 382
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK 374
EM G N TYN++I LC G EA L+K M +G P+ + Y+TL+++ K
Sbjct: 383 REMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKA 442
Query: 375 HHPEEVIALHDYMILKG----VIPDQKTY 399
E + M+ KG ++P Y
Sbjct: 443 GKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 110/267 (41%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C G LA + + + + P SYN+I+N L E V M++ GF
Sbjct: 192 CSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFS 251
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P V TY L+ R G ++ RL DEM G P+ YN +L+ L + A
Sbjct: 252 PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTT 311
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
L+ M + I P Y L +GL R G L ++++K D +++
Sbjct: 312 LNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVV 371
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
S M +G P+V+T ++I G C G +A L M PN +
Sbjct: 372 SGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV 431
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKR 286
Y++ ++ L K A+ ++ E+ K+
Sbjct: 432 YSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V++ G +G LD A ++ ++M T PN +YNS+I G C G A +L +M
Sbjct: 364 VMITGYVVSGELDKAKEMFREM---TVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 118
G P+ Y+TL+ + G L E+ ++ EMV++G + ++V
Sbjct: 421 ESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLV 465
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 3/266 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LL+G ++ L A K+ ++M M +V P V+Y ++I G+C+ + +A EVL +M
Sbjct: 255 ILLNGWFRSRKLKQAEKLWEEMKAM---NVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEM 311
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
A E + + +IDG G L E+L + + P IV YNS++ + GD+
Sbjct: 312 KMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDL 371
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
ASK+L M+ + + P +Y + ++ E + L+ ++++ D + +++
Sbjct: 372 PGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLI 431
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
L +C+ M RG+ PD+ T +I C+L E+A ++ ++
Sbjct: 432 LKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNL 279
P + NGL +D+AK L
Sbjct: 492 IPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 155/342 (45%), Gaps = 16/342 (4%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G EPSV L D + L S+ EM + G + +++S++ L + + E
Sbjct: 94 ETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEM-KPGFTLSPSLFDSVVNSLCKAREFE 152
Query: 135 EA-----SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
A +V SD + D ++ +L R G + +A++ ++ + + +
Sbjct: 153 IAWSLVFDRVRSDEGSNLVSAD--TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSAT 210
Query: 190 ----LNILLNYICKS---XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 242
L +LL+ +CK G + P V +++G + ++A
Sbjct: 211 ELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAE 270
Query: 243 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGY 301
+L+ M M+ +P + Y + I G C+M +A +++E++ ++ ++ FN +I G
Sbjct: 271 KLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGL 330
Query: 302 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 361
+G++ EA G+ VTYN+L+ CK G A +++KMM+ +G+ P
Sbjct: 331 GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
TY +F+K + EE + L+ +I G PD+ TY I+
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLIL 432
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 155/366 (42%), Gaps = 15/366 (4%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEP---SVRTYATLIDGYARWGSLEESLRLCD 106
++S++N CK +A ++ D V++ S T+ LI YAR G +++++R +
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE 197
Query: 107 EMVERGLFP------NIVVYNSILYWLYRHGDMEEASKVLSDM---IDKHICPDQYSYAI 157
R P + + +L L + G + EAS L + +D + P + I
Sbjct: 198 --FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNI 255
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L G R+ L +A KL ++ ++ + L+ C+ M
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE 315
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ + +IDG + G +AL + + P + YNS + CK A
Sbjct: 316 MEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGAS 375
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
++ + R + TT+N +S + +E L ++ G S +R+TY+ ++ +L
Sbjct: 376 KILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKML 435
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C++G A ++ K M +GI PD +T T LI + EE D + +G+IP
Sbjct: 436 CEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQY 495
Query: 397 KTYDAI 402
T+ I
Sbjct: 496 ITFKMI 501
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 142/341 (41%), Gaps = 38/341 (11%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS-YNSIINGFCKKGGLLLAEEVLGD 72
VLLD CK G + A ++++ T +S W SV +N ++NG+ + L AE++ +
Sbjct: 217 VLLDALCKEGHVREASMYLERIG-GTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEE 275
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M +P+V TY TLI+GY R ++ ++ + +EM + N +V+N I+ L G
Sbjct: 276 MKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+ EA ++ P +Y L + C+ G L A K ILK
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASK----ILKM----------- 380
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
M+TRG+ P T K TE+ + LY +I+
Sbjct: 381 --------------------MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAF 311
P+ Y+ + LC+ +A + E++ R + D T LI ++EAF
Sbjct: 421 HSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAF 480
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
G+ +T+ + N L G + AK L +M
Sbjct: 481 EEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 173/385 (44%), Gaps = 23/385 (5%)
Query: 24 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVR 83
S + A KV KM+ + N V++ +I + G A DMV +GFE
Sbjct: 218 SFENAYKVFDKMSEL-------NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 84 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW-LYRHGDMEEASKVLSD 142
T +++ A +L +L + GL ++ +Y G +++ KV
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYL-TEALKLHNQILKFDLIE-DAFSLNILLNYICKS 200
M D + S+ L G +N L TEA+ L ++++ +E + F+ +
Sbjct: 331 MEDHSV----MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
G RGL + +VI K E A R + + + NL Y
Sbjct: 387 SDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL----SEKNLVSY 442
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
N+F++G C+ + + A L+ E+ +R+L + A TF +L+SG +N G I + + +++
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK 502
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
LGLS N+ N LI++ K G + A + M + + I++T++IT F K
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV----ISWTSMITGFAKHGFAIR 558
Query: 380 VIALHDYMILKGVIPDQKTYDAIVT 404
V+ + MI +GV P++ TY AI++
Sbjct: 559 VLETFNQMIEEGVKPNEVTYVAILS 583
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 134/284 (47%), Gaps = 20/284 (7%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N VSYN+ ++G C+ A ++L ++ + S T+A+L+ G A GS+ + ++
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
++V+ GL N V N+++ + G ++ AS+V + M ++++ S+ + G ++
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV----ISWTSMITGFAKH 553
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMIT-RGLPPDVYT 224
G+ L+ NQ+++ + + + +L+ SM + P +
Sbjct: 554 GFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEH 613
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVAKNLVDEL 283
A ++D C+ G A N M Q ++ ++ +F+ G C++ S T++ K L
Sbjct: 614 YACMVDLLCRAGLLTDAFEFIN---TMPFQADVLVWRTFL-GACRVHSNTELGK-----L 664
Query: 284 RKRKLL-----DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 322
RK+L + + L + Y+ +G+ +E+ + +MK L
Sbjct: 665 AARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 150/360 (41%), Gaps = 6/360 (1%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P VS N + + A+ L GF+P + + G +EE++ +
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFLDT---TGFKPEPTLLEQYVKCLSEEGLVEEAIEV 167
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
+ + + G+ ++V NS+L + ++ ++ +M++ D L LC
Sbjct: 168 YNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCD 225
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G ++E +L Q LK L + L++ C+ +MI P +Y
Sbjct: 226 GGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYI 285
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+I G C +A ++ + P+ +Y + I G C+ A+ L E+
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 285 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
K+ + + +N +I G+ G+I EM G ++ NT+I C +G +
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSD 405
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
EA E+ K M G+ P+ ITY LI F K++ E+ + L+ + G+ P Y A+V
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 114/285 (40%), Gaps = 36/285 (12%)
Query: 53 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 112
+I C G + E+L +K G +P YA LI G+ G+ + M+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 113 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 172
FP++ +Y I+ L + EA + ++ DK PD+ Y + G C G+L A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 173 KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN 232
KL + MI +G+ P+ + +I G+
Sbjct: 339 KLWFE-----------------------------------MIKKGMRPNEFAYNVMIHGH 363
Query: 233 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DA 291
K G YN M++ + N+ I G C +D A + + + + +A
Sbjct: 364 FKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNA 423
Query: 292 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
T+N LI G+ ++++ L E+K+LGL + + Y L+ L
Sbjct: 424 ITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P Y +I+GFC+ G EVL M+ PS+ Y +I G E+ +
Sbjct: 246 PGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCI 305
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
+ ++G P+ VVY +++ G + A K+ +MI K + P++++Y ++ G +
Sbjct: 306 FKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFK 365
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G ++ +N++L+ S N ++ C +M G+ P+ T
Sbjct: 366 RGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAIT 425
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
+I G CK EK L+LY + + +P+ Y + + L S + NL
Sbjct: 426 YNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 174/417 (41%), Gaps = 30/417 (7%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G CK+ +D A+++ +M N P+++ YN +++G K + A ++ M
Sbjct: 329 ILIQGCCKSYRMDDAMRIYGEMQY---NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ G S TY LIDG R G E L ++ ++G F + + ++ + L R G +
Sbjct: 386 VQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKL 445
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI- 192
E A K++ +M + D + + L G + G KL I + +L+ + N
Sbjct: 446 EGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAG 505
Query: 193 ----LLNYICKSXXXXXXXXXXGSMI-----------------TRGLPPDVYTKATVIDG 231
L K GS + + D ++ + +D
Sbjct: 506 VEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQ 565
Query: 232 NCKLGNTEKALRLYNGMIKMDEQPN---LTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
N K L +++ +P+ + + N+F++ +A L + +
Sbjct: 566 LAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGV 625
Query: 289 LDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
D T T+N+++S + G A G+ +M +A+ TYN +I L K G + A
Sbjct: 626 TDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLAS 685
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
++ + QG D + Y TLI K +E L D+M G+ PD +Y+ ++
Sbjct: 686 AVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMI 742
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 3/254 (1%)
Query: 23 GSLDLAL---KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
G LD AL K MK+ + + G+S P+ +YNS+I+ C G A V ++ +G E
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P TY LI G + +++++R+ EM G P+ +VYN +L + + EA ++
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
M+ + + ++Y IL +GL RNG L + K DA + +I+ +C+
Sbjct: 382 FEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCR 441
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
M TRG D+ T ++++ G K G + +L + + + PN+
Sbjct: 442 EGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLR 501
Query: 260 YNSFINGLCKMAST 273
+N+ + K +
Sbjct: 502 WNAGVEASLKRPQS 515
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 143/335 (42%), Gaps = 47/335 (14%)
Query: 42 SVWPNSVSYNSIINGFCK---KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 98
S P +V+ N ++ G + + E L M + F+ +Y I G+ WG L
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFD--TWSYNICIHGFGCWGDL 264
Query: 99 EESLRLCDEMVERG------LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 152
+ +L L EM ER P+I YNS+++ L G ++A V ++ PD
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 153 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 212
+Y IL +G C++ + +A++++ G
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIY-----------------------------------GE 349
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M G PD ++DG K +A +L+ M++ + + YN I+GL +
Sbjct: 350 MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR 409
Query: 273 TDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
+ L +L+K+ + +DA TF+ + G+++ A L EM++ G S + VT ++
Sbjct: 410 AEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISS 469
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
L+ K G + ++LMK + + P+ + +
Sbjct: 470 LLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 163/416 (39%), Gaps = 58/416 (13%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
++ +Y+ I C+ G L ++LG M + G L+D R G E +L +
Sbjct: 91 SATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVL 150
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID-------------------- 145
D M E G N VY+S+L L + ++ A +L +++
Sbjct: 151 DYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLP 210
Query: 146 -------------------------------KHICPDQYSYAILTEGLCRNGYLTEALKL 174
K D +SY I G G L AL L
Sbjct: 211 GTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSL 270
Query: 175 HNQILKFDLI------EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
++ + + D + N L++ +C + G PD T +
Sbjct: 271 FKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRIL 330
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
I G CK + A+R+Y M P+ +YN ++G K A L +++ + +
Sbjct: 331 IQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGV 390
Query: 289 LDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
+ T+N LI G +G+ + F L ++K G + +T++ + LC+ G E A +
Sbjct: 391 RASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVK 450
Query: 348 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
L++ M +G D +T ++L+ F+K+ + L ++ ++P+ ++A V
Sbjct: 451 LVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGV 506
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 164/359 (45%), Gaps = 33/359 (9%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C+ G L+ A+K++++M G SV + V+ +S++ GF K+G E+++ + +
Sbjct: 440 CREGKLEGAVKLVEEME-TRGFSV--DLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLV 496
Query: 80 PSVRTYATLIDGYARWGS-LEESLRLCDEMVE--RGLFPNIVVYNSILYWLYRHGDMEEA 136
P+V RW + +E SL+ + +FP+ + I+ + D A
Sbjct: 497 PNV----------LRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASA 546
Query: 137 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS---LNIL 193
+V S M D D +S + + L + L + + + D+F +N
Sbjct: 547 EEV-SPMED-----DPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTF 600
Query: 194 LN-YICK---SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
L+ Y+ K S G +T YT +++ K G + A + + M
Sbjct: 601 LSIYLSKGDLSLACKLFEIFNGMGVT---DLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK-LLDATTFNTLISGYSNSGQID 308
+ ++ YN I GL KM D+A ++D L K+ LD +NTLI+ + ++D
Sbjct: 658 ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD 717
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
EA L MKS G++ + V+YNT+I + K G +EA + +K M+ G P+ +T T L
Sbjct: 718 EATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 3/177 (1%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G L LA K+ + N M + S +YNS+++ F KKG A VL M + +
Sbjct: 608 GDLSLACKLFEIFNGMGVTDL--TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADI 665
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
TY +I G + G + + + D + ++G + +IV+YN+++ L + ++EA+++
Sbjct: 666 ATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDH 725
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
M I PD SY + E + G L EA K +L + + + + +L+Y+ K
Sbjct: 726 MKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELR--KRKLLDATTFNTLISGYSNSGQIDEAFG 312
P N + GL + K + ++L+ KR D ++N I G+ G +D A
Sbjct: 210 PGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 313 LTTEMKSLG------LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
L EMK + TYN+LI++LC G ++A + + + G PD TY
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
LI K + ++ + ++ M G +PD Y+ ++ L A
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKA 372
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G L A ++ K L + V PN+ SYN ++ FC L +A ++ G M++ P V
Sbjct: 169 GYLQKAFELFKSSRL---HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+Y LI G+ R G + ++ L D+M+ +G P+ + Y ++L L R + EA K+L
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M K PD Y + G CR +A K+ + +L ++ S L+ +C
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM 345
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
MI++G P ++ G C G E+A + ++K E + +
Sbjct: 346 FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 405
Query: 263 FINGLCKMASTDVAKNLVDELRKRKL 288
I +C ++ K +++ K ++
Sbjct: 406 VIPLICNEDESEKIKLFLEDAVKEEI 431
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 2/294 (0%)
Query: 65 LAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL 124
L ++VL +G+ + + LI YA E+ L +M+E P N IL
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRIL 161
Query: 125 YWLYRH-GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
L H G +++A ++ + P+ SY +L + C N L+ A +L ++L+ D+
Sbjct: 162 DVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV 221
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
+ D S IL+ C+ M+ +G PD + T+++ C+ +A +
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYK 281
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCKM-ASTDVAKNLVDELRKRKLLDATTFNTLISGYS 302
L M P+L YN+ I G C+ + D K L D L ++ ++ TLI G
Sbjct: 282 LLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC 341
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
+ G DE EM S G S + N L+ C G EEA +++++++ G
Sbjct: 342 DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 41/344 (11%)
Query: 27 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCK-KGGLLLAEEVLGDMVKAGFEPSVRTY 85
L KV+ M + P N I++ +G L A E+ G P+ R+Y
Sbjct: 134 LPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSY 193
Query: 86 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 145
L+ + L + +L +M+ER + P++ Y ++ R G + A ++L DM++
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 146 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 205
K PD+ SY L LCR L EA KL +C+
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKL----------------------LCR------ 285
Query: 206 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 265
M +G PD+ T+I G C+ A ++ + M+ PN Y + I
Sbjct: 286 -------MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIG 338
Query: 266 GLCKMASTDVAKNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 324
GLC D K ++E+ + + N L+ G+ + G+++EA + + G +
Sbjct: 339 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 398
Query: 325 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+ T+ +I L+ C+E+ E +K+ + ++ + T ++
Sbjct: 399 HSDTWEMVIPLI----CNEDESEKIKLFLEDAVKEEITGDTRIV 438
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 236 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTF 294
G +KA L+ PN YN + C +A L ++ +R ++ D ++
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 295 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 354
LI G+ GQ++ A L +M + G +R++Y TL+N LC+ EA +L+ M +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 355 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+G PD + Y T+I F ++ + + D M+ G P+ +Y ++
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 4/188 (2%)
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS-TDVAKNL 279
+++T + KL EK L + M++ + P N ++ L A L
Sbjct: 120 EIFTYLIKVYAEAKL--PEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 280 VDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
R ++ T ++N L+ + + + A+ L +M + + +Y LI C+
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR 237
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
G A EL+ M+ +G PD ++YTTL+ +K E L M LKG PD
Sbjct: 238 KGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVH 297
Query: 399 YDAIVTPF 406
Y+ ++ F
Sbjct: 298 YNTMILGF 305
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 195/489 (39%), Gaps = 128/489 (26%)
Query: 10 IKEW-VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 68
IKEW V + +TG + AL+V K+M W +SVSYN +I+G+ + G LA +
Sbjct: 64 IKEWNVAISSYMRTGRCNEALRVFKRM------PRW-SSVSYNGMISGYLRNGEFELARK 116
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
+ +M E + ++ +I GY R +L ++ L + M ER ++ +N++L
Sbjct: 117 LFDEMP----ERDLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYA 168
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
++G +++A V M +K + S+ L +N + EA L + L+
Sbjct: 169 QNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALV---- 220
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY--- 245
S N LL K SM R DV + T+I G + G ++A +L+
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDES 276
Query: 246 -----------------NGMIK-----MDEQP---------------------------- 255
N M++ D+ P
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 256 -----NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEA 310
N++ +N+ I G + AKNL D++ KR D ++ +I+GYS SG EA
Sbjct: 337 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR---DPVSWAAMIAGYSQSGHSFEA 393
Query: 311 FGLTTEMKSLGLSANRVTY-----------------------------------NTLINL 335
L +M+ G NR ++ N L+ +
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 453
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
CK G EEA +L K M + D +++ T+I +++ E + + M +G+ PD
Sbjct: 454 YCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 396 QKTYDAIVT 404
T A+++
Sbjct: 510 DATMVAVLS 518
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 160/388 (41%), Gaps = 51/388 (13%)
Query: 13 WVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 72
W L+ C G K+++ +V + VS+N+II G+ + G + A ++ +
Sbjct: 217 WALVSWNCLLGGFVKKKKIVEARQFFDSMNV-RDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 73 MVKAGFEP--SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
P V T+ ++ GY + +EE+ L D+M ER N V +N++L Y
Sbjct: 276 ------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLA-GYVQ 324
Query: 131 GDMEEASKVLSD----------------------------MIDKHICPDQYSYAILTEGL 162
G+ E +K L D + DK D S+A + G
Sbjct: 325 GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 384
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
++G+ EAL+L Q+ + + S + L+ G ++ G
Sbjct: 385 SQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGC 444
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
+ ++ CK G+ E+A L+ M D + +N+ I G + +VA +
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGKD----IVSWNTMIAGYSRHGFGEVALRFFES 500
Query: 283 LRKRKLL-DATTFNTLISGYSNSGQIDEAFG-LTTEMKSLGLSANRVTYNTLINLLCKNG 340
+++ L D T ++S S++G +D+ T + G+ N Y +++LL + G
Sbjct: 501 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLI 368
E+A LMK M + PD + TL+
Sbjct: 561 LLEDAHNLMKNMPFE---PDAAIWGTLL 585
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 140/326 (42%), Gaps = 37/326 (11%)
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
PS +T+A + + YA G +++++L M E G F ++ +N+IL
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTIL--------------- 168
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
+ LC++ + +A +L + L+ D + N++LN C
Sbjct: 169 --------------------DVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNGWCL 207
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
M+ RG+ P++ T T++ G + G A + M K D + ++
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 260 YNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
Y + ++G A+N+ DE+ R+ L T+N +I ++ A + EM
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
G N TYN LI L G +ELM+ M +G P+ TY +I ++++ E
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 387
Query: 379 EVIALHDYMILKGVIPDQKTYDAIVT 404
+ + L + M +P+ TY+ +++
Sbjct: 388 KALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 5/288 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++ + G D A+K+ M+ + + + S+N+I++ CK + A E+
Sbjct: 131 IVAERYASAGKPDKAVKLFLNMH---EHGCFQDLASFNTILDVLCKSKRVEKAYELF-RA 186
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++ F TY +++G+ ++L + EMVERG+ PN+ YN++L +R G +
Sbjct: 187 LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A + +M + D +Y + G G + A + +++++ ++ + N +
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ +CK M+ RG P+V T +I G G + L M
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISG 300
+PN YN I + + + A L +++ L + T+N LISG
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%)
Query: 182 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 241
+ + DA S ++ ++ + M + + P T A V + G +KA
Sbjct: 86 EYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKA 145
Query: 242 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGY 301
++L+ M + +L +N+ ++ LCK + A L LR R +D T+N +++G+
Sbjct: 146 VKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGW 205
Query: 302 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 361
+ +A + EM G++ N TYNT++ + G A E M + D
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+TYTT++ F + + D MI +GV+P TY+A++
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M V P+ +YN++I CKK + A + +MV+ G+EP+V TY LI G G
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
L M G PN YN ++ + ++E+A + M P+ +Y I
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 158 LTEGL 162
L G+
Sbjct: 411 LISGM 415
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
CK +++ A+ + ++M PN +YN +I G G EE++ M G E
Sbjct: 311 CKKDNVENAVVMFEEM---VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 367
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY---RHGDM 133
P+ +TY +I Y+ +E++L L ++M PN+ YN ++ ++ R DM
Sbjct: 368 PNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDM 424
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 153/330 (46%), Gaps = 1/330 (0%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+ +YN ++ + +A + +M + P TY+TLI + + G + +L
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
+M + + ++V+Y++++ R D +A + S + I PD +Y + +
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
EA L ++ + ++ + S + LL+ ++ M D+ T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+ID +L ++A RL+ + KMD +PN+ YN+ + + A +L ++
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 285 KRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
++ + + T+NT+I Y + + ++A L EM+S G+ N +TY+T+I++ K G +
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNK 373
A L + + G+ D + Y T+I + +
Sbjct: 453 RAATLFQKLRSSGVEIDQVLYQTMIVAYER 482
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 160/369 (43%), Gaps = 6/369 (1%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
K + + + + + P+ V+YNS+IN + K A ++ +M +AG P+ +Y+TL+
Sbjct: 243 KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM-EEASKVLSDMIDKHI 148
Y E+L + EM E ++ N I+ +Y DM +EA ++ + I
Sbjct: 303 SVYVENHKFLEALSVFAEMKEVNCALDLTTCN-IMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 149 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 208
P+ SY + EA+ L + + D+ ++ + N ++ K+
Sbjct: 362 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN 421
Query: 209 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 268
M +RG+ P+ T +T+I K G ++A L+ + + + +Y + I
Sbjct: 422 LVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYE 481
Query: 269 KMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 328
++ AK L+ EL KL D T I+ + +G+ +EA + + G +
Sbjct: 482 RVGLMGHAKRLLHEL---KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISV 538
Query: 329 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 388
+ +INL +N E+ + M G PD ++ + K+ E+ ++ M
Sbjct: 539 FGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQ 598
Query: 389 LKG-VIPDQ 396
+G V PD+
Sbjct: 599 EEGCVFPDE 607
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P++ YN + + + D+A L DE+R+R L D T++TLI+ + G D A
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCD-EEAKELMKMMIMQGIRPDCITYTTLITHFN 372
+M+ +S + V Y+ LI L + CD +A + + GI PD + Y ++I +
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIEL-SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
K E L M GV+P+ +Y +++ ++
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV 306
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 4/226 (1%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G +L + + LM + N V+YN++I + K A ++ +M G EP+
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNA 435
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
TY+T+I + + G L+ + L ++ G+ + V+Y +++ R G M A ++L +
Sbjct: 436 ITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHE 495
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
+ PD L + G EA + Q + ++D ++N ++
Sbjct: 496 L----KLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQR 551
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
M T G PD A V++ K EKA +Y M
Sbjct: 552 YVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 597
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G LD+ + + + + PN VSYN+I+ + + A + M + E +V
Sbjct: 341 GQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNV 400
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
TY T+I Y + E++ L EM RG+ PN + Y++I+ + G ++ A+ +
Sbjct: 401 VTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQK 460
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ + DQ Y + R G + A +L +++ D I ++ IL
Sbjct: 461 LRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITIL 511
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 147/331 (44%), Gaps = 43/331 (12%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LLD CK G + ++++M + V P++ ++N + G+C+ A ++L +M
Sbjct: 239 MLLDALCKCGLVKEGEALLRRMR----HRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLF---PNIVVYNSILYWLYRH 130
++AG +P TY ID + + G ++E+ L D M+ +G P + ++ L ++
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
EE +++ MI PD +Y + EG+C + EA K ++
Sbjct: 355 DKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDE------------- 401
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
M +G PPD+ T + C+ T++AL+LY M++
Sbjct: 402 ----------------------MSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVE 439
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 309
P++ YN I+ +M D A N E+ KR + D T+ +I+G + + E
Sbjct: 440 SRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKE 499
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
A L E+ + GL +++ + L + G
Sbjct: 500 ACFLLEEVVNKGLKLPYRVFDSFLMRLSEVG 530
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 137/310 (44%), Gaps = 5/310 (1%)
Query: 53 IINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERG 112
I+ +C++ + + ++ +P + + L+D + G ++E L M R
Sbjct: 205 ILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR- 263
Query: 113 LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 172
+ P+ +N + + R D ++A K+L +MI+ P+ ++Y + C+ G + EA
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 173 KLHN-QILKFDLIE--DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 229
L + I K + A + +++ + K+ G MI+ G PDV T VI
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-RKRKL 288
+G C ++A + + M P++ YN F+ LC+ TD A L + R
Sbjct: 384 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCA 443
Query: 289 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
T+N LIS + D AF TEM + TY +IN L +EA L
Sbjct: 444 PSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFL 503
Query: 349 MKMMIMQGIR 358
++ ++ +G++
Sbjct: 504 LEEVVNKGLK 513
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 7/259 (2%)
Query: 150 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 209
P+ ++ +L + LC+ G + E L + ++ + DA + N+L C+
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRR-MRHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 210 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
MI G P+ +T ID C+ G ++A L++ MI + +F +
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 270 MASTDVAKNLVDELRKRK-----LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 324
+A D A+ EL R L D +T+ +I G + ++DEA+ EM + G
Sbjct: 351 LAKNDKAEECF-ELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 325 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 384
+ VTYN + +LC+N +EA +L M+ P TY LI+ F + P+
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 385 DYMILKGVIPDQKTYDAIV 403
M + + D +TY A++
Sbjct: 470 TEMDKRDCVQDVETYCAMI 488
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 42/311 (13%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL G C+ A+K++++M + G+ P + +Y + I+ FC+ G + A ++ M
Sbjct: 273 VLFFGWCRVRDPKKAMKLLEEM-IEAGHK--PENFTYCAAIDTFCQAGMVDEAADLFDFM 329
Query: 74 VKAGFE---PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
+ G P+ +T+A +I A+ EE L M+ G P++ Y ++ +
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
++EA K L +M +K PD +Y LC N EALKL+
Sbjct: 390 EKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY--------------- 434
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
G M+ P V T +I ++ + + A + M K
Sbjct: 435 --------------------GRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDK 474
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 309
D ++ Y + INGL A L++E+ + L L F++ + S G +
Sbjct: 475 RDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKA 534
Query: 310 AFGLTTEMKSL 320
++ MK
Sbjct: 535 IHKVSEHMKKF 545
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQID 308
I++ QP + +N ++ LCK + L+ +R R DA TFN L G+
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPK 285
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG---IRPDCITYT 365
+A L EM G TY I+ C+ G +EA +L MI +G P T+
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 366 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
+I K EE L MI G +PD TY ++ +A
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ N+LL+ +CK M R + PD T + G C++ + +KA++L M
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR----KLLDATTFNTLISGYSNS 304
I+ +P Y + I+ C+ D A +L D + + A TF +I + +
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 305 GQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
+ +E F L M S G + TY +I +C +EA + + M +G PD +TY
Sbjct: 355 DKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414
Query: 365 TTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
+ + +E + L+ M+ P +TY+ +++ F
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 165/396 (41%), Gaps = 43/396 (10%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS---YNSIINGFCK-KGGLLLAEEV 69
+L+ C G ++ A V+ +M + V P ++ YN+ I G K KG A +V
Sbjct: 217 LLIKAYCMAGLIERAEVVLVEMQ---NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 70 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
M + +P+ TY +I+ Y + S +L EM PNI Y +++ R
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 333
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
G E+A ++ + + + PD Y Y L E R GY A ++ FS
Sbjct: 334 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI-------------FS 380
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
L M G PD + ++D + G A ++ M
Sbjct: 381 L----------------------MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
++ P + + ++ K + +V E+ + + D N++++ Y GQ
Sbjct: 419 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 478
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+ + EM++ +A+ TYN LIN+ K G E +EL + + RPD +T+T+ I
Sbjct: 479 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 538
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+++K + + + + MI G PD T +++
Sbjct: 539 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 574
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 163/378 (43%), Gaps = 41/378 (10%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+ G+ + A+ V ++M + P + +YN +IN + K ++ ++ +M +P
Sbjct: 263 RKGNTEEAIDVFQRMKR---DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 319
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
++ TY L++ +AR G E++ + +++ E GL P++ VYN+++ R G A+++
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
S M PD+ SY I+ + R G ++A + ++ + + S +LL+ K+
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 439
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M G+ PD + ++++ +LG KM++ I
Sbjct: 440 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ----------FTKMEK-----IL 484
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
NG C D +T+N LI+ Y +G ++ L E+K
Sbjct: 485 AEMENGPCTA-------------------DISTYNILINIYGKAGFLERIEELFVELKEK 525
Query: 321 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 380
+ VT+ + I + + E+ + MI G PD T L++ + + E+V
Sbjct: 526 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 585
Query: 381 IA----LHDYMILKGVIP 394
+ +H + + ++P
Sbjct: 586 TSVLRTMHKGVTVSSLVP 603
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 136/326 (41%), Gaps = 40/326 (12%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K+ F+P V + LID Y + +E+ L +++E P Y ++ G +E
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 135 EASKVLSDMIDKHICPDQYS---YAILTEGLC-RNGYLTEALKLHNQILKFDLIEDAFSL 190
A VL +M + H+ P Y EGL R G EA+ + ++ + +
Sbjct: 230 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
N+++N +Y KA+ + + +LY M
Sbjct: 290 NLMIN--------------------------LYGKAS---------KSYMSWKLYCEMRS 314
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 309
+PN+ Y + +N + + A+ + ++L++ L D +N L+ YS +G
Sbjct: 315 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYG 374
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
A + + M+ +G +R +YN +++ + G +A+ + + M GI P ++ L++
Sbjct: 375 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 434
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPD 395
++K + A+ M GV PD
Sbjct: 435 AYSKARDVTKCEAIVKEMSENGVEPD 460
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN---LTIYNSFINGLCKM-ASTDV 275
P T A +I C G E+A + M P +T+YN++I GL K +T+
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 269
Query: 276 AKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
A ++ +++ + T T+N +I+ Y + + ++ L EM+S N TY L+N
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
+ G E+A+E+ + + G+ PD Y L+ +++ +P + M G P
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
Query: 395 DQKTYDAIVTPF 406
D+ +Y+ +V +
Sbjct: 390 DRASYNIMVDAY 401
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/315 (17%), Positives = 132/315 (41%), Gaps = 36/315 (11%)
Query: 94 RWGSLEESLRLCDEMVERGLF-PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 152
+W S+ + +C+ ++ + F P+++ +N ++ + +EA + +++ P +
Sbjct: 156 KWDSI---ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 212
Query: 153 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 212
+YA+L + C G + A + ++ + + + YI G
Sbjct: 213 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYI------------EGL 260
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M +G NTE+A+ ++ M + +P YN IN K +
Sbjct: 261 MKRKG-------------------NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASK 301
Query: 273 TDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
+ ++ L E+R + + T+ L++ ++ G ++A + +++ GL + YN
Sbjct: 302 SYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNA 361
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
L+ + G A E+ +M G PD +Y ++ + + + A+ + M G
Sbjct: 362 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 421
Query: 392 VIPDQKTYDAIVTPF 406
+ P K++ +++ +
Sbjct: 422 IAPTMKSHMLLLSAY 436
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 165/396 (41%), Gaps = 43/396 (10%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS---YNSIINGFCK-KGGLLLAEEV 69
+L+ C G ++ A V+ +M + V P ++ YN+ I G K KG A +V
Sbjct: 195 LLIKAYCMAGLIERAEVVLVEMQ---NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 70 LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
M + +P+ TY +I+ Y + S +L EM PNI Y +++ R
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 311
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
G E+A ++ + + + PD Y Y L E R GY A ++ FS
Sbjct: 312 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI-------------FS 358
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
L M G PD + ++D + G A ++ M
Sbjct: 359 L----------------------MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 396
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
++ P + + ++ K + +V E+ + + D N++++ Y GQ
Sbjct: 397 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 456
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+ + EM++ +A+ TYN LIN+ K G E +EL + + RPD +T+T+ I
Sbjct: 457 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 516
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+++K + + + + MI G PD T +++
Sbjct: 517 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 552
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 163/378 (43%), Gaps = 41/378 (10%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+ G+ + A+ V ++M + P + +YN +IN + K ++ ++ +M +P
Sbjct: 241 RKGNTEEAIDVFQRMKR---DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 297
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
++ TY L++ +AR G E++ + +++ E GL P++ VYN+++ R G A+++
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
S M PD+ SY I+ + R G ++A + ++ + + S +LL+ K+
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M G+ PD + ++++ +LG KM++ I
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ----------FTKMEK-----IL 462
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
NG C D +T+N LI+ Y +G ++ L E+K
Sbjct: 463 AEMENGPCTA-------------------DISTYNILINIYGKAGFLERIEELFVELKEK 503
Query: 321 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 380
+ VT+ + I + + E+ + MI G PD T L++ + + E+V
Sbjct: 504 NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 563
Query: 381 IA----LHDYMILKGVIP 394
+ +H + + ++P
Sbjct: 564 TSVLRTMHKGVTVSSLVP 581
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 136/326 (41%), Gaps = 40/326 (12%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K+ F+P V + LID Y + +E+ L +++E P Y ++ G +E
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 135 EASKVLSDMIDKHICPDQYS---YAILTEGLC-RNGYLTEALKLHNQILKFDLIEDAFSL 190
A VL +M + H+ P Y EGL R G EA+ + ++ + +
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
N+++N +Y KA+ + + +LY M
Sbjct: 268 NLMIN--------------------------LYGKAS---------KSYMSWKLYCEMRS 292
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDE 309
+PN+ Y + +N + + A+ + ++L++ L D +N L+ YS +G
Sbjct: 293 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYG 352
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
A + + M+ +G +R +YN +++ + G +A+ + + M GI P ++ L++
Sbjct: 353 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 412
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPD 395
++K + A+ M GV PD
Sbjct: 413 AYSKARDVTKCEAIVKEMSENGVEPD 438
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN---LTIYNSFINGLCKM-ASTDV 275
P T A +I C G E+A + M P +T+YN++I GL K +T+
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 247
Query: 276 AKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
A ++ +++ + T T+N +I+ Y + + ++ L EM+S N TY L+N
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
+ G E+A+E+ + + G+ PD Y L+ +++ +P + M G P
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
Query: 395 DQKTYDAIVTPF 406
D+ +Y+ +V +
Sbjct: 368 DRASYNIMVDAY 379
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/315 (17%), Positives = 132/315 (41%), Gaps = 36/315 (11%)
Query: 94 RWGSLEESLRLCDEMVERGLF-PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQ 152
+W S+ + +C+ ++ + F P+++ +N ++ + +EA + +++ P +
Sbjct: 134 KWDSI---ILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 190
Query: 153 YSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 212
+YA+L + C G + A + ++ + + + YI G
Sbjct: 191 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYI------------EGL 238
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M +G NTE+A+ ++ M + +P YN IN K +
Sbjct: 239 MKRKG-------------------NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASK 279
Query: 273 TDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
+ ++ L E+R + + T+ L++ ++ G ++A + +++ GL + YN
Sbjct: 280 SYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNA 339
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
L+ + G A E+ +M G PD +Y ++ + + + A+ + M G
Sbjct: 340 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 399
Query: 392 VIPDQKTYDAIVTPF 406
+ P K++ +++ +
Sbjct: 400 IAPTMKSHMLLLSAY 414
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 152/356 (42%), Gaps = 7/356 (1%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
+S+ YN I++ K +V +M K + +TY L++ YA ++E++ +
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+ E G+ ++V ++ +L WL R+ +E A + + C D + ++ G C
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC-DIKAMNMILNGWCVL 260
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G + EA + I+ D S ++N + K +M PDV
Sbjct: 261 GNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKIC 320
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
VID C +AL ++ + + PN+ YNS + LCK+ T+ LV+E+
Sbjct: 321 NNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMEL 380
Query: 286 RK---LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
+ + TF+ L+ S +D + K S YN + L + +
Sbjct: 381 KGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSD---LYNLMFRLYVQWDKE 437
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
E+ +E+ M G+ PD TYT I + K E ++ M+ KG++P+ +T
Sbjct: 438 EKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 8/238 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++L+G C G++ A + K + + P+ VSY ++IN KKG L A E+ M
Sbjct: 252 MILNGWCVLGNVHEAKRFWKDI---IASKCRPDVVSYGTMINALTKKGKLGKAMELYRAM 308
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
P V+ +ID + E+L + E+ E+G PN+V YNS+L L +
Sbjct: 309 WDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRT 368
Query: 134 EEASKVLSDMIDK--HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
E+ +++ +M K P+ +++ L + R+ + L+ + K ++ D + N
Sbjct: 369 EKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKN-KCEMTSDLY--N 425
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
++ + M GL PD T I G G +AL + M+
Sbjct: 426 LMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMM 483
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 5/239 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+++ K G L A KV +M L G S NS Y + C+KG + AE +L +M
Sbjct: 309 IVVYAKAKEGDLVSARKVFDEM-LQRGFSA--NSFVYTVFVRVCCEKGDVKEAERLLSEM 365
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++G P T+ LI G+AR+G E+ L C+ MV RGL P+ +N ++ + + ++
Sbjct: 366 EESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENV 425
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL-NI 192
A+++L+ IDK PD+++Y+ L G + +ALKL + +++ + F +
Sbjct: 426 NRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYE-MEYRKMSPGFEVFRS 484
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
L+ +C M R + P+ +I K+G+ A R+YN MI +
Sbjct: 485 LIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMISV 543
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 131/295 (44%), Gaps = 1/295 (0%)
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P+ T +I + G L+E + L D + + P+++V S+++ + +EE+ +
Sbjct: 232 PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSL 291
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
L ++ K++ D Y+I+ + G L A K+ +++L+ ++F + + C+
Sbjct: 292 LKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
M G+ P T +I G + G EK L M+ P+ +
Sbjct: 352 KGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSA 411
Query: 260 YNSFINGLCKMASTDVAKN-LVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
+N + + K+ + + A L + K + D T++ LI G+ ID+A L EM+
Sbjct: 412 FNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEME 471
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+S + +LI LC G E ++ +K+M + I P+ Y LI F K
Sbjct: 472 YRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQK 526
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 136/308 (44%), Gaps = 4/308 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+++ CK G L +V+ ++ + G P+ + S++ ++ + + +L +
Sbjct: 239 IMIQVLCKEGRLK---EVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRL 295
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ Y+ ++ A+ G L + ++ DEM++RG N VY + GD+
Sbjct: 296 LMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDV 355
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+EA ++LS+M + + P ++ L G R G+ + L+ ++ L+ + N +
Sbjct: 356 KEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEM 415
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ + K I +G PD +T + +I G + + ++AL+L+ M
Sbjct: 416 VKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKM 475
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
P ++ S I GLC + + + ++KR + +A ++ LI + G A
Sbjct: 476 SPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADR 535
Query: 313 LTTEMKSL 320
+ EM S+
Sbjct: 536 VYNEMISV 543
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/324 (18%), Positives = 130/324 (40%), Gaps = 34/324 (10%)
Query: 84 TYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM 143
+ L+ YA+ LE + + + G +++ N+++++ + + ++
Sbjct: 166 VFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECA 225
Query: 144 IDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXX 203
IDK I P++ + I+ + LC+ G L E + L ++I + L+ + +
Sbjct: 226 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRI 285
Query: 204 XXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF 263
++ + + D + V+ K G+ A ++++ M++ N +Y F
Sbjct: 286 EESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVF 345
Query: 264 INGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 323
+ C+ G + EA L +EM+ G+S
Sbjct: 346 VRVCCE----------------------------------KGDVKEAERLLSEMEESGVS 371
Query: 324 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 383
T+N LI + G +E+ E ++M+ +G+ P C + ++ +K + +
Sbjct: 372 PYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEI 431
Query: 384 HDYMILKGVIPDQKTYDAIVTPFL 407
I KG +PD+ TY ++ F+
Sbjct: 432 LTKSIDKGFVPDEHTYSHLIRGFI 455
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 156/356 (43%), Gaps = 54/356 (15%)
Query: 85 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 144
+ +I GY +WG+ EE+ +L D M E ++V + ++ + D+E A K M
Sbjct: 170 WNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMP 225
Query: 145 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 204
+K + S+ + G +NG+ +AL+L N +L+ + + + I+++
Sbjct: 226 EKSVV----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 205 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 264
+ + + + + K ++D + K + + A R++N ++ Q NL +N+ I
Sbjct: 282 LTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN---ELGTQRNLVTWNAMI 338
Query: 265 NGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG--- 321
+G ++ A+ L D + KR ++ ++N+LI+GY+++GQ A +M G
Sbjct: 339 SGYTRIGDMSSARQLFDTMPKRNVV---SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSK 395
Query: 322 ---------LSA------------------------NRVTYNTLINLLCKNGCDEEAKEL 348
LSA N Y +LI + + G EAK +
Sbjct: 396 PDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRV 455
Query: 349 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
M + D ++Y TL T F E + L M +G+ PD+ TY +++T
Sbjct: 456 FDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLT 507
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 167/367 (45%), Gaps = 29/367 (7%)
Query: 12 EW-VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 70
+W V++ G K G+ + A K+ ++M N V VS+ +I GF K L A +
Sbjct: 169 DWNVMISGYWKWGNKEEACKLF---DMMPENDV----VSWTVMITGFAKVKDLENARKYF 221
Query: 71 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
M E SV ++ ++ GYA+ G E++LRL ++M+ G+ PN + ++
Sbjct: 222 DRMP----EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFR 277
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTE--GLCRNGYLTEALKLHNQILKFDLIEDAF 188
D ++ + +K + + + L + CR+ + A ++ N++ +
Sbjct: 278 ADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD--IQSARRIFNEL---GTQRNLV 332
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ N +++ + +M R +V + ++I G G A+ + M
Sbjct: 333 TWNAMISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDM 388
Query: 249 IKM-DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQ 306
I D +P+ S ++ MA ++ +VD +RK ++ L+ + + +LI Y+ G
Sbjct: 389 IDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGN 448
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
+ EA + EMK + V+YNTL NG E L+ M +GI PD +TYT+
Sbjct: 449 LWEAKRVFDEMKERDV----VSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTS 504
Query: 367 LITHFNK 373
++T N+
Sbjct: 505 VLTACNR 511
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 24/259 (9%)
Query: 114 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC---PDQYSYAILTEGLCRNGYLTE 170
FPN+ V NS+ + + M+ A+ VL + C PD +S+ ++ + R G L +
Sbjct: 68 FPNVFVVNSMFKYFSK---MDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQ 124
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVI 229
AL + K +D + N++++ K + R G +V +I
Sbjct: 125 AL-----VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV-----MI 174
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 289
G K GN E+A +L++ M + D + + I G K+ + A+ D + ++ ++
Sbjct: 175 SGYWKWGNKEEACKLFDMMPEND----VVSWTVMITGFAKVKDLENARKYFDRMPEKSVV 230
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
++N ++SGY+ +G ++A L +M LG+ N T+ +I+ + L+
Sbjct: 231 ---SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLV 287
Query: 350 KMMIMQGIRPDCITYTTLI 368
K++ + +R +C T L+
Sbjct: 288 KLIDEKRVRLNCFVKTALL 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 71/169 (42%), Gaps = 40/169 (23%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG-FEPSVRT-------------------- 84
N VS+NS+I G+ G LA E DM+ G +P T
Sbjct: 361 NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCI 420
Query: 85 ---------------YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
Y +LI YAR G+L E+ R+ DEM ER ++V YN++
Sbjct: 421 VDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAA 476
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
+GD E +LS M D+ I PD+ +Y + R G L E ++ I
Sbjct: 477 NGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 22/318 (6%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSY-------NSIINGFCKKGGLLLA 66
+L+ G +L+ A+++ + M + G V P SY NS +G K L
Sbjct: 206 ILVKGLVSNDNLEKAMEIKEDM-AVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQEL-- 262
Query: 67 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV--ERGLFPNIVVYNSIL 124
+E LG V G Y L+ GY +E++ +E V + + + YN +L
Sbjct: 263 KEKLGGFVDDGV-----VYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVL 317
Query: 125 YWLYRHGDMEEASKVLSDMIDKHICPDQYS-----YAILTEGLCRNGYLTEALKLHNQIL 179
L +G +EA K+ + +H P + + ++ G C G EA+++ Q+
Sbjct: 318 EALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMG 377
Query: 180 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 239
F D S N L+N +C + G M + + PD YT ++D K G +
Sbjct: 378 DFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKID 437
Query: 240 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLIS 299
+ Y M++ + +PNL +YN + L K D AK+ D + + +D + ++
Sbjct: 438 EGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEAYKFIMR 497
Query: 300 GYSNSGQIDEAFGLTTEM 317
S +G++DE + EM
Sbjct: 498 ALSEAGRLDEMLKIVDEM 515
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V+++G C G + A++V ++M P+++S+N+++N C L AE++ G+M
Sbjct: 355 VMVNGYCAGGKFEEAMEVFRQMGDF---KCSPDTLSFNNLMNQLCDNELLAEAEKLYGEM 411
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ +P TY L+D + G ++E MVE L PN+ VYN + L + G +
Sbjct: 412 EEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKL 471
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 184
++A K DM+ + D +Y + L G L E LK+ +++L D +
Sbjct: 472 DDA-KSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTV 521
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 15/343 (4%)
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSIL--YWLYRHGDME-EA 136
P++ T T++ R L+L + + G+ PNI+ YN I Y R ++ E
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 137 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 196
K+ D + + P ++ IL +GL N L +A+++ + + D + L+
Sbjct: 188 YKLFID--NAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG 245
Query: 197 ICKSXXXXXXXXXXGSMITR--GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
K+ + + G D ++ G ++A+ Y + + +
Sbjct: 246 CVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSK 305
Query: 255 PNLTI--YNSFINGLCKMASTDVAKNLVDELRK-----RKL-LDATTFNTLISGYSNSGQ 306
++ YN + L + D A L D ++K R L ++ TFN +++GY G+
Sbjct: 306 VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
+EA + +M S + +++N L+N LC N EA++L M + ++PD TY
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
L+ K+ +E A + M+ + P+ Y+ + + A
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 162/386 (41%), Gaps = 27/386 (6%)
Query: 32 MKKMNLMTGNSVW----PNSVSYNSIINGFCKKG--GLLLAEEVLGDMVKAGFEPSVRTY 85
+++ L T +SV+ P + N+++ ++ G LL ++ G + +AG P++ TY
Sbjct: 111 LEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALL--QLHGFINQAGIAPNIITY 168
Query: 86 ATLIDGYARWGSLEESLRLCDEMVERG-LFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 144
+ Y E +L ++ L P+I + ++ L + ++E+A ++ DM
Sbjct: 169 NLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMA 228
Query: 145 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL---IEDAFSLNILLN-YICKS 200
K D Y+ L G +N LKL+ Q LK L ++D L+ Y K
Sbjct: 229 VKGFVVDPVVYSYLMMGCVKNSDADGVLKLY-QELKEKLGGFVDDGVVYGQLMKGYFMKE 287
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKAT----VIDGNCKLGNTEKALRLYNGMIKMDEQP- 255
++ G V A V++ + G ++AL+L++ + K P
Sbjct: 288 MEKEAMECYEEAV---GENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPR 344
Query: 256 ----NLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA 310
NL +N +NG C + A + ++ K D +FN L++ ++ + EA
Sbjct: 345 HLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEA 404
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
L EM+ + + TY L++ K G +E K M+ +RP+ Y L
Sbjct: 405 EKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQ 464
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQ 396
K ++ + D M+ K + D+
Sbjct: 465 LIKAGKLDDAKSFFDMMVSKLKMDDE 490
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 178/423 (42%), Gaps = 58/423 (13%)
Query: 13 WVLLDGA-CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL----LAE 67
W + G C+ G + AL +M N ++P+ N ++ CK G L
Sbjct: 141 WAAIIGVKCRIGLCEGALMGFVEM---LENEIFPD----NFVVPNVCKACGALKWSRFGR 193
Query: 68 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 127
V G +VK+G E V ++L D Y + G L+++ ++ DE+ +R N V +N+++
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGY 249
Query: 128 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 187
++G EEA ++ SDM + + P + + + G + E + H + + D
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309
Query: 188 FSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
LLN+ CK M + DV T +I G + G E A+ +
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQL 365
Query: 248 M-----------------------------------IKMDEQPNLTIYNSFINGLCKMAS 272
M I+ + ++ + ++ ++ K S
Sbjct: 366 MRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGS 425
Query: 273 TDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 332
AK + D ++ L+ +NTL++ Y+ SG EA L M+ G+ N +T+N +
Sbjct: 426 IVDAKKVFDSTVEKDLI---LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLI 482
Query: 333 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 392
I L +NG +EAK++ M GI P+ I++TT++ + EE I M G+
Sbjct: 483 ILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL 542
Query: 393 IPD 395
P+
Sbjct: 543 RPN 545
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 171/386 (44%), Gaps = 23/386 (5%)
Query: 9 CIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 68
C+ L+ A +T +L L +V +S + V +++++ + K G ++ A++
Sbjct: 375 CVTLATLMSAAARTENLKLGKEVQ---CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKK 431
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
V V E + + TL+ YA G E+LRL M G+ PN++ +N I+ L
Sbjct: 432 VFDSTV----EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLL 487
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
R+G ++EA + M I P+ S+ + G+ +NG EA+ ++ + L +AF
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPD--VYTKATVIDGNCKLGNTEKALRLYN 246
S+ + L+ C I R L V + +++D K G+ KA +++
Sbjct: 548 SITVALS-ACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Query: 247 GMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSG 305
+ + L + N+ I+ + A L L L D T ++S +++G
Sbjct: 607 SKLYSE----LPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAG 662
Query: 306 QIDEAFGLTTEMKS-LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITY 364
I++A + T++ S + Y +++LL G E+A L++ M +PD
Sbjct: 663 DINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM---PFKPDARMI 719
Query: 365 TTLITHFNKKHHPEEVIALHDYMILK 390
+L+ NK+ E L DY+ K
Sbjct: 720 QSLVASCNKQRKTE----LVDYLSRK 741
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 140/349 (40%), Gaps = 55/349 (15%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL ++G AL++ M L V PN +++N II + G + A+++ M
Sbjct: 447 LLAAYAESGLSGEALRLFYGMQL---EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN------------------ 116
+G P++ ++ T+++G + G EE++ +M E GL PN
Sbjct: 504 SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLH 563
Query: 117 ------------------IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
+ + S++ + GD+ +A KV + YS L
Sbjct: 564 IGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKL--------YSELPL 615
Query: 159 TEGLCRN----GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
+ + G L EA+ L+ + L D ++ +L+ + ++
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 215 T-RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 273
+ R + P + ++D G TEKALRL +M +P+ + S + K T
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAGETEKALRLIE---EMPFKPDARMIQSLVASCNKQRKT 732
Query: 274 DVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 322
++ L +L + + ++ + T+ + Y+ G DE + MK+ GL
Sbjct: 733 ELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGL 781
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 147/368 (39%), Gaps = 54/368 (14%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+S SY ++ CK G + A ++ +M Y ++ G L ++
Sbjct: 33 PSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQI 92
Query: 105 CDEMVERGLFPNIVVY-NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 163
+++ G F Y + L Y D E ++VL K + +S+A + C
Sbjct: 93 HARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVL---FSKLRVRNVFSWAAIIGVKC 149
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX----XXGSMITRGLP 219
R G AL ++L+ ++ D N ++ +CK+ G ++ GL
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPD----NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
V+ +++ D K G + A +++
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVF---------------------------------- 231
Query: 280 VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
DE+ R +A +N L+ GY +G+ +EA L ++M+ G+ RVT +T ++
Sbjct: 232 -DEIPDR---NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANM 287
Query: 340 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 399
G EE K+ + I+ G+ D I T+L+ + K E + D M K V+ T+
Sbjct: 288 GGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV----TW 343
Query: 400 DAIVTPFL 407
+ I++ ++
Sbjct: 344 NLIISGYV 351
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 176/399 (44%), Gaps = 31/399 (7%)
Query: 18 GACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAG 77
G + G+L AL K+ + + N S+ ++ K L L + G ++ AG
Sbjct: 153 GYAQDGNLHEALWFYKEFRR---SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAG 209
Query: 78 FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEAS 137
F +V ++ID YA+ G +E + R DEM + +I ++ +++ + GDME A
Sbjct: 210 FLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK----DIHIWTTLISGYAKLGDMEAAE 265
Query: 138 KVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 197
K+ +M +K + S+ L G R G AL L +++ + + F+ + L
Sbjct: 266 KLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCAS 321
Query: 198 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 257
G MI + P+ +++ID K G+ E + R++ D++ +
Sbjct: 322 ASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR---ICDDKHDC 378
Query: 258 TIYNSFINGLCKMASTDVAKNLVDELRK-RKLLDATTFNTLISGYSNSGQIDEAFGLTTE 316
+N+ I+ L + A ++D++ K R + TT +++ S+SG ++E
Sbjct: 379 VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFES 438
Query: 317 MK-SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI----THF 371
M G+ ++ Y LI+LL + GC KELM+ + PD + ++ H
Sbjct: 439 MTVQHGIVPDQEHYACLIDLLGRAGC---FKELMRKIEEMPFEPDKHIWNAILGVCRIHG 495
Query: 372 NK---KHHPEEVIALH-----DYMILKGVIPDQKTYDAI 402
N+ K +E+I L Y++L + D ++ +
Sbjct: 496 NEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELV 534
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 133/298 (44%), Gaps = 16/298 (5%)
Query: 77 GFE-PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
GF+ P+ LI Y + G ++ ++ D+M R L+ +N+++ + G +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYS----WNNMVSGYVKSGMLVR 131
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
A V M ++ D S+ + G ++G L EAL + + + + + FS LL
Sbjct: 132 ARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQP 255
KS G ++ G +V ++ID K G E A R ++ M D
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD--- 244
Query: 256 NLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 315
+ I+ + I+G K+ + A+ L E+ ++ + ++ LI+GY G + A L
Sbjct: 245 -IHIWTTLISGYAKLGDMEAAEKLFCEMPEK---NPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
+M +LG+ + T+++ + KE+ MI +RP+ I ++LI ++K
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 142/306 (46%), Gaps = 16/306 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G K G ++ A K+ +M N VS+ ++I G+ ++G A ++ M+
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPE-------KNPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G +P T+++ + A SL + M+ + PN +V +S++ + G +E
Sbjct: 304 ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLE 363
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+ +V DKH C + + L ++G +AL++ + ++KF + + +L ++L
Sbjct: 364 ASERVFRICDDKHDC---VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Query: 195 NYICKSXXXXXXXXXXGSM-ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
N S SM + G+ PD A +ID + G ++ +R + +M
Sbjct: 421 NACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMR---KIEEMPF 477
Query: 254 QPNLTIYNSFINGLCKM-ASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG 312
+P+ I+N+ + G+C++ + ++ K DEL K + + L S Y++ G+ +
Sbjct: 478 EPDKHIWNAIL-GVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEK 536
Query: 313 LTTEMK 318
L MK
Sbjct: 537 LRGVMK 542
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 164/384 (42%), Gaps = 36/384 (9%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
A KV +M+L N S+N++++G+ K G L+ A V M E V ++ T
Sbjct: 101 ACKVFDQMHLR-------NLYSWNNMVSGYVKSGMLVRARVVFDSMP----ERDVVSWNT 149
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
++ GYA+ G+L E+L E G+ N + +L + ++ + ++
Sbjct: 150 MVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAG 209
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
+ + + + G + A + +++ ++D L++ K
Sbjct: 210 FLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT----VKDIHIWTTLISGYAKLGDMEAAE 265
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
M + P +T +I G + G+ +AL L+ MI + +P ++S +
Sbjct: 266 KLFCEMPEKN--PVSWT--ALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCAS 321
Query: 268 CKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEA---FGLTTEMKSLGLS 323
+AS K + + R +A ++LI YS SG ++ + F + +
Sbjct: 322 ASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC--- 378
Query: 324 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP---EEV 380
V +NT+I+ L ++G +A ++ MI ++P+ TTL+ N H EE
Sbjct: 379 ---VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPN---RTTLVVILNACSHSGLVEEG 432
Query: 381 IALHDYMILK-GVIPDQKTYDAIV 403
+ + M ++ G++PDQ+ Y ++
Sbjct: 433 LRWFESMTVQHGIVPDQEHYACLI 456
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 177/424 (41%), Gaps = 46/424 (10%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L G C++G D A + ++M L N + P+SV+ ++I + L L E +
Sbjct: 123 AMLSGFCQSGHTDKAFSLFREMRL---NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVG 179
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++ G + V T I Y + G L+ S +L E ++RG +V +NS+ G+
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLD-SAKLVFEAIDRGD-RTVVSWNSMFKAYSVFGEA 237
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A + M+ + PD ++ L LT+ +H+ + +D ++N
Sbjct: 238 FDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTF 297
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ KS M +R + +I G + G+ ++AL L++ MIK E
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSR----TCVSWTVMISGYAEKGDMDEALALFHAMIKSGE 353
Query: 254 QPNLTIYNSFINGLCKMASTDVAK--------------------NLVDELRK-------R 286
+P+L S I+G K S + K L+D K R
Sbjct: 354 KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEAR 413
Query: 287 KLLDAT------TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
+ D T T+ T+I+GY+ +G EA L ++M L N +T+ ++ +G
Sbjct: 414 DIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSG 473
Query: 341 CDEEAKELMKMM-IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 399
E+ E +M + I P Y+ ++ +K EE + L M K PD +
Sbjct: 474 SLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK---PDAGIW 530
Query: 400 DAIV 403
A++
Sbjct: 531 GALL 534
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 50/343 (14%)
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
ESL L EM G PN + + R D+ V + +I D +
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
+ + + A K+ ++ + DA + N +L+ C+S M +
Sbjct: 95 DMFVKCNSVDYAAKVFERMPE----RDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGM----IKMDEQPNLTIYNSFINGLCKMASTDV 275
PD T T+I + EK+L+L M I++ +T+ N++I+ K D
Sbjct: 151 PDSVTVMTLIQS----ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 206
Query: 276 AKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
AK LV E R ++N++ YS G+ +AFGL M + +T INL
Sbjct: 207 AK-LVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD---LSTFINL 262
Query: 336 L--CKN-----------------GCDEEAKELMKMMIMQGIRPD---------------C 361
C+N G D++ + + + M D C
Sbjct: 263 AASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTC 322
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+++T +I+ + +K +E +AL MI G PD T ++++
Sbjct: 323 VSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 119/274 (43%), Gaps = 9/274 (3%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
VS+ +I+G+ +KG + A + M+K+G +P + T +LI G ++GSLE +
Sbjct: 323 VSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDAR 382
Query: 108 MVERGL-FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 166
G N+++ N+++ + G + EA + + +K + ++ + G NG
Sbjct: 383 ADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVV----TWTTMIAGYALNG 438
Query: 167 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM-ITRGLPPDVYTK 225
EALKL ++++ D + + +L S M + P +
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY 498
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+ ++D + G E+AL L + M +P+ I+ + +N + +A+ + L
Sbjct: 499 SCMVDLLGRKGKLEEALEL---IRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFN 555
Query: 286 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
+ A + + + Y+ +G D + + MK
Sbjct: 556 LEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQ 589
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 143/323 (44%), Gaps = 17/323 (5%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
N +I F K G A +V + GF P+ +TY ++ + ++ + +C++M++
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKV--LSDMIDKHICPDQYSYAILTEGLCRN-GY 167
G+ +I+ W + G EEA V L+ +K + P A L LC+N G
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPP--RFVATLITALCKNDGT 352
Query: 168 LTEALKLHNQILKFDLIEDAFSLNI-----LLNYICKSXXXXXXXXXXGSMITRGLPPDV 222
+T A Q + DL +A I +++ +C+ MI++G P
Sbjct: 353 ITFA-----QEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGN 407
Query: 223 YTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
V+ K G+ ++A + M +P++ Y I+G K D A+ ++ E
Sbjct: 408 AVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAE 467
Query: 283 LRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
+K+ K L T++ LI GY + DEA L EM G+ N YN LI C
Sbjct: 468 AKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKAL 527
Query: 342 D-EEAKELMKMMIMQGIRPDCIT 363
D E+A+ L + M +G+ + I+
Sbjct: 528 DWEKAEVLFEEMKQKGLHLNAIS 550
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 40/271 (14%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL-LAEEVLGDMVKAGF 78
CK G + A V + + S+ P V+ ++I CK G + A+E+LGD+
Sbjct: 312 CKEGKAEEAYSVYE-LAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGEAR 368
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
++ ++ +I R +++++ L +M+ +G P V+N +++ + GD++EA +
Sbjct: 369 RRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKE 428
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
VL M + + PD Y+Y ++ G + G + EA ++ + K
Sbjct: 429 VLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKK------------------ 470
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
+ L P Y +I G CK+ ++AL+L N M + QPN
Sbjct: 471 ---------------KHKKLSPVTYH--ALIRGYCKIEEYDEALKLLNEMDRFGVQPNAD 513
Query: 259 IYNSFINGLC-KMASTDVAKNLVDELRKRKL 288
YN I C K + A+ L +E++++ L
Sbjct: 514 EYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 128/297 (43%), Gaps = 6/297 (2%)
Query: 116 NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLH 175
N+ + N ++ + G + A V S + P+ +Y + E LC+ ++ A +
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 176 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXX--XXGSMITRGLPPDVYTKATVIDGNC 233
++LK ++ + + ++ + CK + LPP AT+I C
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFV--ATLITALC 347
Query: 234 K-LGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN-LVDELRKRKLLDA 291
K G A + + + + ++ I+ LC+M + AK L+D + K
Sbjct: 348 KNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGN 407
Query: 292 TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 351
FN ++ S +G +DEA + M+S GL + TY +I+ K G +EA+E++
Sbjct: 408 AVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAE 467
Query: 352 MIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
+ + +TY LI + K +E + L + M GV P+ Y+ ++ F L
Sbjct: 468 AKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL 524
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 184/404 (45%), Gaps = 63/404 (15%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS---LEESL 102
N+V++N++I+G+ K+ + A ++ M K V T+ T+I GY G LEE+
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNTMISGYVSCGGIRFLEEAR 125
Query: 103 RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
+L DEM R F +N+++ ++ + EA + M +++ S++ + G
Sbjct: 126 KLFDEMPSRDSFS----WNTMISGYAKNRRIGEALLLFEKMPERNAV----SWSAMITGF 177
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM--ITRGLPP 220
C+NG + A+ L ++ ++D+ L L+ + K+ G + G
Sbjct: 178 CQNGEVDSAVVLFRKM----PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRED 233
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYN-----------GMIKMDEQPNLTIYNSFINGLCK 269
VY T+I G + G E A L++ G + N+ +NS I K
Sbjct: 234 LVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLK 293
Query: 270 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM------------ 317
+ A+ L D+++ R D ++NT+I GY + ++++AF L +EM
Sbjct: 294 VGDVVSARLLFDQMKDR---DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMV 350
Query: 318 ---KSLG------------LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
S+G + V++N++I KN +EA +L M ++G +PD
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 363 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
T T+L++ + + +H +++K VIPD ++A++T +
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQ-IVVKTVIPDVPVHNALITMY 453
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 187/427 (43%), Gaps = 50/427 (11%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++ G C+ G +D A+ + +KM + +S +++ G K L A VLG
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPV-------KDSSPLCALVAGLIKNERLSEAAWVLGQY 224
Query: 74 --VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE----------RGLF-PNIVVY 120
+ +G E V Y TLI GY + G +E + L D++ + R F N+V +
Sbjct: 225 GSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSW 284
Query: 121 NSILYWLYRHGDMEEASKVLSDMIDK-------------HICPDQYSYAILTEGLCRN-- 165
NS++ + GD+ A + M D+ H+ + ++A+ +E R+
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH 344
Query: 166 -------GYLTEA-LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
GY + ++L + + S N ++ K+ M G
Sbjct: 345 SWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG 404
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
PD +T +++ + L N ++++ ++K P++ ++N+ I + ++
Sbjct: 405 EKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESR 463
Query: 278 NLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
+ DE++ ++ + T+N +I GY+ G EA L MKS G+ + +T+ +++N
Sbjct: 464 RIFDEMKLKR--EVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACA 521
Query: 338 KNGCDEEAK-ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
G +EAK + + MM + I P Y++L+ + + EE + + M + PD+
Sbjct: 522 HAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFE---PDK 578
Query: 397 KTYDAIV 403
+ A++
Sbjct: 579 TVWGALL 585
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 80/139 (57%)
Query: 42 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 101
S++P +++YNS+I+GFCK+ + A+ +L M G P V T++TLI+GY + ++
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
+ + EM RG+ N V Y ++++ + GD++ A +L++MI + PD ++ + G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 162 LCRNGYLTEALKLHNQILK 180
LC L +A + + K
Sbjct: 125 LCSKKELRKAFAILEDLQK 143
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGL 313
P YNS I+G CK D AK ++D + + D TF+TLI+GY + ++D +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
EM G+ AN VTY TLI+ C+ G + A++L+ MI G+ PD IT+ ++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 374 KHHPEEVIAL 383
K + A+
Sbjct: 128 KKELRKAFAI 137
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG CK +D A +++ + M P+ V+++++ING+CK + E+ +M
Sbjct: 16 MIDGFCKQDRVDDAKRML---DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G + TY TLI G+ + G L+ + L +EM+ G+ P+ + ++ +L L ++
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 135 EASKVLSDM 143
+A +L D+
Sbjct: 133 KAFAILEDL 141
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 178 ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGN 237
+L++ + + N +++ CK SM ++G PDV T +T+I+G CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 238 TEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNT 296
+ + ++ M + N Y + I+G C++ D A++L++E+ + D TF+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 297 LISGYSNSGQIDEAFGLTTEMK 318
+++G + ++ +AF + +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 293 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
T+N++I G+ ++D+A + M S G S + VT++TLIN CK + E+ M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 353 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+GI + +TYTTLI F + + L + MI GV PD T+ ++
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 123
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 65/126 (51%)
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M++ P+ TY ++IDG+ + ++++ R+ D M +G P++V +++++ +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
++ ++ +M + I + +Y L G C+ G L A L N+++ + D + +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 193 LLNYIC 198
+L +C
Sbjct: 121 MLAGLC 126
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 65/145 (44%)
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
M+ I P +Y + +G C+ + +A ++ + + D + + L+N CK+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
M RG+ + T T+I G C++G+ + A L N MI P+ ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 263 FINGLCKMASTDVAKNLVDELRKRK 287
+ GLC A ++++L+K +
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSE 145
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 160/357 (44%), Gaps = 50/357 (14%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
NS+I + + G L L+ +V M + ++ ++ +++ Y + G +++++ L DEM
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMK----DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
GL P+IV +NS+L G ++A VL M + P S + L + + G+L
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 230
+H IL+ L DVY + T+ID
Sbjct: 244 GKAIHGYILRNQLWY-----------------------------------DVYVETTLID 268
Query: 231 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL- 289
K G A +++ M + N+ +NS ++GL A+ L+ + K +
Sbjct: 269 MYIKTGYLPYARMVFDMM----DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
DA T+N+L SGY+ G+ ++A + +MK G++ N V++ + + KNG A ++
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 350 KMMIMQGIRPDCITYTTLIT---HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
M +G+ P+ T +TL+ + H +EV H + + K +I D A+V
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV---HGFCLRKNLICDAYVATALV 438
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 164/413 (39%), Gaps = 56/413 (13%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+ G L+L+ KV M N S+NSI++ + K G + A +L +M G +P
Sbjct: 136 RNGKLELSRKVFNSMKD-------RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP 188
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
+ T+ +L+ GYA G ++++ + M GL P+ +S+L + G ++ +
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE--DAFSLNILLNYIC 198
++ + D Y L + + GYL A + FD+++ + + N L++ +
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYAR------MVFDMMDAKNIVAWNSLVSGLS 302
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
+ M G+ PD T ++ G LG EKAL + M + PN+
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 259 IYNSFING-------------LCKMASTDVAKNLVDE----------------------- 282
+ + +G KM V N
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 283 LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
LRK + DA L+ Y SG + A + +K+ L+ ++N ++ G
Sbjct: 423 LRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRG 478
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK-GVIP 394
EE +M+ G+ PD IT+T++++ +E D M + G+IP
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIP 531
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 153/359 (42%), Gaps = 49/359 (13%)
Query: 12 EWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 71
E L+D KTG L A V M+ N V++NS+++G L AE ++
Sbjct: 263 ETTLIDMYIKTGYLPYARMVFDMMDA-------KNIVAWNSLVSGLSYACLLKDAEALMI 315
Query: 72 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
M K G +P T+ +L GYA G E++L + +M E+G+ PN+V + +I ++G
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
+ A KV M ++ + P+ + + L + L L ++H L+ +LI DA+
Sbjct: 376 NFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT 435
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
L++ KS + + L + ++ G G E+ + ++ M++
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGIAAFSVMLEA 491
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAF 311
+P DA TF +++S NSG + E +
Sbjct: 492 GMEP----------------------------------DAITFTSVLSVCKNSGLVQEGW 517
Query: 312 GLTTEMKS-LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
M+S G+ + +++LL ++G +EA + ++ M ++PD + ++
Sbjct: 518 KYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM---SLKPDATIWGAFLS 573
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Query: 243 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYS 302
+++ ++++ + N+++ NS I + ++++ + + ++ R L +++N+++S Y+
Sbjct: 110 QIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL---SSWNSILSSYT 166
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
G +D+A GL EM+ GL + VT+N+L++ G ++A ++K M + G++P
Sbjct: 167 KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS 226
Query: 363 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
+ ++L+ + H + A+H Y ++ +Q YD V L+
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGY-----ILRNQLWYDVYVETTLI 267
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 180/418 (43%), Gaps = 49/418 (11%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++D K+G + A + K+M L G + P +V++N++I+ + G L ++ M
Sbjct: 304 MIDTYGKSGQIKEASETFKRM-LEEG--IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM- 359
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K P RTY LI + + +E + EM + GL P+ V Y ++LY +E
Sbjct: 360 KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 135 EASKVLSDMIDKHICPDQYSYAILT---------------------------EGLCRN-- 165
EA ++++M D ++ D+Y+ + LT EG N
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANID 479
Query: 166 -----GYLTEALKLH---NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
GYL+EA ++ ++ K +IE N+++ S SM++ G
Sbjct: 480 AYGERGYLSEAERVFICCQEVNKRTVIE----YNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ PD T T++ K M + + Y + I+ K+ ++A+
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 278 NLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+ E+ + + D + LI+ ++++G + +A MK G+ N V YN+LI L
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 337 CKNGCDEEAKELMKMMIMQGIR---PDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
K G +EA+ + + ++ + PD T +I ++++ + A+ D M +G
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG 713
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 153/328 (46%), Gaps = 6/328 (1%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
+S Y++ I+ + ++G L AE V + + +V Y +I Y S E++ L
Sbjct: 470 SSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELF 528
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV-LSDMIDKHICPDQYSYAILTEGLCR 164
+ M+ G+ P+ YN+++ L DM + L M + D Y + +
Sbjct: 529 ESMMSYGVTPDKCTYNTLVQIL-ASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVK 587
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G L A +++ +++++++ D +L+N + +M G+P +
Sbjct: 588 LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIK---MDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
++I K+G ++A +Y +++ + P++ N IN + + A+ + D
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFD 707
Query: 282 ELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
+++R + TF ++ Y +G+ +EA + +M+ + + + ++YN+++ L +G
Sbjct: 708 SMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGR 767
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLIT 369
+EA E K M+ GI+PD T+ +L T
Sbjct: 768 FKEAVETFKEMVSSGIQPDDSTFKSLGT 795
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 140/343 (40%), Gaps = 19/343 (5%)
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL---CDEMVERGLFPNIVVYNSILY 125
V G+M G Y+ ID Y G L E+ R+ C E+ +R ++ YN ++
Sbjct: 465 VAGNMSSEG-------YSANIDAYGERGYLSEAERVFICCQEVNKR----TVIEYNVMIK 513
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
E+A ++ M+ + PD+ +Y L + L + ++ + +
Sbjct: 514 AYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVS 573
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D +++ K M+ + PDV +I+ GN ++A+
Sbjct: 574 DCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYV 633
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVA----KNLVDELRKRKLLDATTFNTLISGY 301
M + N IYNS I K+ D A + L+ K + D T N +I+ Y
Sbjct: 634 EAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLY 693
Query: 302 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 361
S + +A + MK G AN T+ ++ + KNG EEA ++ K M I D
Sbjct: 694 SERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDP 752
Query: 362 ITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
++Y +++ F +E + M+ G+ PD T+ ++ T
Sbjct: 753 LSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGT 795
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 12/331 (3%)
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
S TY T+ID Y + G ++E+ M+E G+ P V +N++++ +G + E + ++
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
M H PD +Y IL +N + A ++ L D S LL
Sbjct: 357 KTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI- 259
M + D YT++ + + EK+ + + N++
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFK---RFHVAGNMSSE 472
Query: 260 -YNSFINGLCKMASTDVAKNLV---DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 315
Y++ I+ + A+ + E+ KR +++ +N +I Y S ++A L
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICCQEVNKRTVIE---YNVMIKAYGISKSCEKACELFE 529
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
M S G++ ++ TYNTL+ +L + + ++ M G DCI Y +I+ F K
Sbjct: 530 SMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLG 589
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
++ M+ + PD Y ++ F
Sbjct: 590 QLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 43/273 (15%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
+ Y ++I+ F K G L +AEEV +MV+ EP V Y LI+ +A G++++++ +
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI---DKHICPD------------- 151
M E G+ N V+YNS++ + G ++EA + ++ +K PD
Sbjct: 636 MKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSE 695
Query: 152 ---------------------QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
++++A++ +NG EA ++ Q+ + ++ D S
Sbjct: 696 RSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSY 755
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
N +L M++ G+ PD T ++ KLG ++KA+R + K
Sbjct: 756 NSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRK 815
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
+ + L ++ S ++ L + + VDEL
Sbjct: 816 KEIKRGLELWISTLSSLVGIG------DCVDEL 842
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 158/402 (39%), Gaps = 41/402 (10%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N + YN ++ K + + +M++ G +P TY TLID Y++ G +L
Sbjct: 186 NVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWL 245
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL------SDMIDKHICPDQYSYAILT 159
+M + G+ P+ V +L + + ++A + + D H+C Y+Y +
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
+ ++G + EA + ++L+ ++ + N +++ + +M
Sbjct: 306 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CA 364
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PD T +I + K + E+A + M +P+ Y + + + A+ L
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 280 VDELRKRKL-LDATTFNTLISGYSNSGQIDEA------FGLTTEMKSLGLSAN------- 325
+ E+ + +D T + L Y + ++++ F + M S G SAN
Sbjct: 425 IAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGER 484
Query: 326 --------------------RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 365
+ YN +I + E+A EL + M+ G+ PD TY
Sbjct: 485 GYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYN 544
Query: 366 TLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
TL+ P + + M G + D Y A+++ F+
Sbjct: 545 TLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFV 586
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 154/365 (42%), Gaps = 16/365 (4%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
+S +YN++I+ + K G + A E M++ G P+ T+ T+I Y G L E L
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
M + P+ YN ++ ++ D+E A +M D + PD SY L
Sbjct: 357 KTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYIC------KSXXXXXXXXXXGSMITRGLP 219
+ EA L ++ ++ D ++ + L KS G+M + G
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYS 475
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
+ ID + G +A R++ +++++ + YN I S + A L
Sbjct: 476 AN-------IDAYGERGYLSEAERVFICCQEVNKR-TVIEYNVMIKAYGISKSCEKACEL 527
Query: 280 VDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
+ + + D T+NTL+ +++ + +M+ G ++ + Y +I+ K
Sbjct: 528 FESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVK 587
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKT 398
G A+E+ K M+ I PD + Y LI F + ++ ++ + M G+ +
Sbjct: 588 LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVI 647
Query: 399 YDAIV 403
Y++++
Sbjct: 648 YNSLI 652
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 8/206 (3%)
Query: 211 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI----KMDEQPNLT--IYNSFI 264
G M G+ PD T V+ K +KA + K D L+ YN+ I
Sbjct: 246 GKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMI 305
Query: 265 NGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 323
+ K A + + ++ T TFNT+I Y N+GQ+ E L MK L +
Sbjct: 306 DTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCA 364
Query: 324 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 383
+ TYN LI+L KN E A K M G++PD ++Y TL+ F+ +H EE L
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 384 HDYMILKGVIPDQKTYDAIVTPFLLA 409
M V D+ T A+ ++ A
Sbjct: 425 IAEMDDDNVEIDEYTQSALTRMYVEA 450
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
K G LD A + +K+ + +P+ + N +IN + ++ + AE + M + G E
Sbjct: 657 KVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EA 715
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
+ T+A ++ Y + G EE+ ++ +M E + + + YNS+L G +EA +
Sbjct: 716 NEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETF 775
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDL 183
+M+ I PD ++ L L + G +A++ +I K ++
Sbjct: 776 KEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 160/360 (44%), Gaps = 7/360 (1%)
Query: 42 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 101
S P+ V Y ++ + + G + +AEE +M++ G EP T++ YARWG
Sbjct: 183 SYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAM 242
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
L + ER + + VYN +L L + + + +M+++ + P++++Y ++
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 162 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 221
+ G+ EALK ++ + + + + +++ K+ M ++G+ P
Sbjct: 303 YAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPS 362
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
YT AT++ K N KAL L+ M + + I I K+ A+++ +
Sbjct: 363 NYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFE 422
Query: 282 ELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
E + LL D T+ + + NSG + +A + MK+ + +R Y ++ K
Sbjct: 423 ETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQ 482
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 400
+ A+E + + G+ PD + ++ + + + E+ +K ++ DQ +D
Sbjct: 483 NVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGF-----IKQIMVDQVHFD 536
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 162/402 (40%), Gaps = 47/402 (11%)
Query: 35 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 94
+NLM + ++V N +I+ F ++G + AE + +++ G T ATLI Y R
Sbjct: 625 LNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGR 682
Query: 95 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 154
L+E+ RL E P V S++ R G +E+A + + +K P +
Sbjct: 683 QHKLKEAKRLYLAAGESKT-PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVT 741
Query: 155 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
+IL L G EA + L+ ++ D N L+ + ++ M
Sbjct: 742 ISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMH 801
Query: 215 TRGLPPDVYT---------------KATVIDGNCKL--------------------GNTE 239
T G+P + T KA I N + G
Sbjct: 802 TSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMS 861
Query: 240 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL-----RKRKLLDATTF 294
+AL L++ M K +P YN + K+ +T + VDEL R + D +T+
Sbjct: 862 EALSLFSEMQKKGIKPGTPSYNMMV----KICATSRLHHEVDELLQAMERNGRCTDLSTY 917
Query: 295 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM 354
TLI Y+ S Q EA T +K G+ + +++L++ L K G EEA+ M
Sbjct: 918 LTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSE 977
Query: 355 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
GI PD T++ + E+ I ++ MI V D+
Sbjct: 978 AGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDR 1019
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 135/346 (39%), Gaps = 37/346 (10%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M V PN +Y +++ + K+G A + G+M GF P TY+++I + G
Sbjct: 284 MVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
E+++ L ++M +G+ P+ ++L Y+ + +A + +DM I D+ +
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ + G +A + + + +L+ D
Sbjct: 404 IIRIYGKLGLFHDAQSMFEETERLNLLADE------------------------------ 433
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
Y + + N GN KAL + M D + Y + K+ + D A+
Sbjct: 434 ---KTYLAMSQVHLNS--GNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAE 488
Query: 278 NLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
L K L DA++ N +++ Y+ ++A G ++ + + Y T + + C
Sbjct: 489 EAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYC 548
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLIT--HFNKKHHPEEVI 381
K G EA++L+ M + D TL H KH E +
Sbjct: 549 KEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAV 594
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE-LRK 285
++ID + G E A L+ + P + +N L A+++ L K
Sbjct: 709 SMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK 768
Query: 286 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
LD +NTLI +G++ A + M + G+ + TYNT+I++ + ++A
Sbjct: 769 NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Query: 346 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
E+ G+ D YT +I H+ K E ++L M KG+ P +Y+ +V
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/378 (18%), Positives = 146/378 (38%), Gaps = 8/378 (2%)
Query: 29 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 88
+K + + +M + + +Y ++ + K + AEE + K G P + +
Sbjct: 450 VKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDM 508
Query: 89 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 148
++ Y R E++ +++ + +I +Y + + + G + EA ++ M +
Sbjct: 509 LNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREAR 568
Query: 149 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 208
D L E + ++ H +L + D +L ++LN K
Sbjct: 569 VKDNRFVQTLAESM----HIVNKHDKHEAVLNVSQL-DVMALGLMLNLRLKEGNLNETKA 623
Query: 209 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 268
M L + VI + G+ KA + + +I++ + + I
Sbjct: 624 ILNLMFKTDLGSSAVNR--VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYG 681
Query: 269 KMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 328
+ AK L + K + ++I Y G +++A+GL E G VT
Sbjct: 682 RQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVT 741
Query: 329 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 388
+ L+N L G EA+ + + + + I D + Y TLI + + +++ M
Sbjct: 742 ISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMH 801
Query: 389 LKGVIPDQKTYDAIVTPF 406
GV +TY+ +++ +
Sbjct: 802 TSGVPCSIQTYNTMISVY 819
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 167/409 (40%), Gaps = 51/409 (12%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+++ K G + ALK +M + P V+Y+S+I+ K G A + DM
Sbjct: 298 LVVSSYAKQGFKEEALKAFGEMKSL---GFVPEEVTYSSVISLSVKAGDWEKAIGLYEDM 354
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY-RHGD 132
G PS T AT++ Y + + ++L L +M ER P V ++ +Y + G
Sbjct: 355 RSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM-ERNKIPADEVIRGLIIRIYGKLGL 413
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+A + + ++ D+ +Y +++ +G + +AL + + D+ F+ +
Sbjct: 414 FHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIV 473
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK-- 250
+L K ++ GL PD + +++ +L EKA G IK
Sbjct: 474 MLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKA----KGFIKQI 528
Query: 251 MDEQPNLTI--YNSFINGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYS----- 302
M +Q + I Y + + CK A++L+ ++ R+ ++ D TL
Sbjct: 529 MVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKH 588
Query: 303 -------NSGQID-EAFGLTTEMK-------------------SLGLSANRVTYNTLINL 335
N Q+D A GL ++ LG SA N +I+
Sbjct: 589 DKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSA----VNRVISS 644
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 384
+ G +A+ + ++I G+R + T TLI + ++H +E L+
Sbjct: 645 FVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY 693
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 147/341 (43%), Gaps = 15/341 (4%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV-ERGLFPNIVVYNSILYWLYRHGDM 133
++GF + T+ +ID ++ E S L + M+ PN V + I++ Y +
Sbjct: 74 ESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFR-IVFKRYVTAHL 132
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL--- 190
+ + D +D D+ S+ L + LC + ++ EA +L ++I + FS+
Sbjct: 133 VQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEEL---CFGKNVIGNGFSVSNT 189
Query: 191 ---NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNG 247
N++L K M T G+ D+++ + +D CK G KA++LY
Sbjct: 190 KIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKE 249
Query: 248 MIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQ 306
M + ++ YN+ I + + + E+R+R + T NT+I G+
Sbjct: 250 MKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR 309
Query: 307 IDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
+ +A+ + EM G + +TY L + L K E L MI G+RP TY
Sbjct: 310 MRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTYVM 366
Query: 367 LITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
L+ F + + V+ + M G PD Y+A++ +
Sbjct: 367 LMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALI 407
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 124/274 (45%), Gaps = 3/274 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D C+ + A ++ N++ N+ +N I+ G+ K G +E M
Sbjct: 157 LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMD 216
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G + +Y+ +D + G ++++L EM R + ++V YN+++ + +E
Sbjct: 217 TEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVE 276
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+V +M ++ P+ ++ + + LC +G + +A ++ +++ K D+ + L
Sbjct: 277 FGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLF 336
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ + K G MI G+ P + T ++ + G + L ++ M + +
Sbjct: 337 SRLEKPSEILSLF---GRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDT 393
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
P+ YN+ I+ L + D+A+ +E+ +R L
Sbjct: 394 PDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 136/333 (40%), Gaps = 40/333 (12%)
Query: 75 KAGFEPSVRTYATLIDGYAR---WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
+ ++P+ YA +I+ + + + +EE +R ++ +R F YN + + G
Sbjct: 88 RKDYQPTESLYALMINKFGQAKMYDEIEEVMRTI-KLEKRCRFSEEFFYNLMRIYGNLAG 146
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
+ A ++L M D P S+ + L E K+ K + DA LN
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
IL+ +C+S GN E AL+L + +
Sbjct: 207 ILIKGLCES-----------------------------------GNLEAALQLLDEFPQQ 231
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEA 310
+PN+ ++ I G C + A L++ + K ++ D TFN LISG G+++E
Sbjct: 232 KSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEG 291
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
L MK G N TY ++ L + EAKE+M MI G+RP ++Y ++
Sbjct: 292 IDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLG 351
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ E+ + M+ G +P + +V
Sbjct: 352 LCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+ G C++G+L+ AL+++ + PN ++++ +I GFC KG A ++L M
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSR---PNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K EP T+ LI G + G +EE + L + M +G PN Y +LY L
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
EA +++S MI + P SY + GLC + E
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVE 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 35/230 (15%)
Query: 44 WPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLR 103
WP+S S+N I+N ++ K G E LI G G+LE +L+
Sbjct: 164 WPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQ 223
Query: 104 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 163
L DE ++ PN++ ++ ++ G EEA K+L M + I PD ++ IL GL
Sbjct: 224 LLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLR 283
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 223
+ G + E + DL+E M +G P+
Sbjct: 284 KKGRVEEGI---------DLLE--------------------------RMKVKGCEPNPG 308
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 273
T V+ G +A + + MI +P+ Y + GLC+ S
Sbjct: 309 TYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 79/170 (46%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
N +I G C+ G L A ++L + + P+V T++ LI G+ G EE+ +L + M +
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
+ P+ + +N ++ L + G +EE +L M K P+ +Y + GL E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 220
A ++ +Q++ + + S ++ +C++ M+ G P
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 166/355 (46%), Gaps = 53/355 (14%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N V++ ++++G+ + L +AE + +M E +V ++ T+IDGYA+ G ++++L L
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
DEM ER NIV +NS++ L + G ++EA + M + D S+ + +GL +N
Sbjct: 164 DEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKN 215
Query: 166 GYLTEALKL---------------------HNQILKFDLI------EDAFSLNILLNYIC 198
G + EA +L +N+I + D + D S N ++
Sbjct: 216 GKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFI 275
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-QPNL 257
++ + R +V + T+I G + E+AL +++ M++ +PN+
Sbjct: 276 RNREMNKAC----GLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNV 331
Query: 258 TIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNT--LISGYSNSGQIDEAFGLTT 315
Y S ++ +A V + +L + + T L++ YS SG++ A
Sbjct: 332 GTYVSILSACSDLAGL-VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAA----R 386
Query: 316 EMKSLGLSANR--VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+M GL R +++N++I + +G +EA E+ M G +P +TY L+
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL 441
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 156/387 (40%), Gaps = 59/387 (15%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++DG K G +D A ++ M N +S+N++I G+ + + A+++ M
Sbjct: 207 AMVDGLAKNGKVDEARRLFDCMPER-------NIISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ F ++ T+I G+ R + ++ L D M E+ N++ + +++ + +
Sbjct: 260 PERDFA----SWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKEN 311
Query: 134 EEASKVLSDMI-DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
EEA V S M+ D + P+ +Y + L E ++H I K ++ +
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSA 371
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGL--PPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
LLN KS M GL D+ + ++I G+ ++A+ +YN M K
Sbjct: 372 LLNMYSKSGELIAAR----KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
Query: 251 MDEQPNLTIY----------------NSFINGLCKMASTDVAKN----LVDEL-RKRKLL 289
+P+ Y F L + S + + LVD R +L
Sbjct: 428 HGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLK 487
Query: 290 DATTF-------------NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
D T F ++S + ++ A + ++ G S + TY + N+
Sbjct: 488 DVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMSNIY 546
Query: 337 CKNGCDEEAKELMKMMIMQGIR--PDC 361
NG EEA E+ M +G++ P C
Sbjct: 547 AANGKREEAAEMRMKMKEKGLKKQPGC 573
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEG 161
+ L EM +RGL N V Y +++ L++ GD + A ++ +M+ + PD +Y IL +G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 162 LCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 221
LC+NG L +AL +ED + L C S+ +G+ P+
Sbjct: 61 LCKNGKLEKALVAGK-------VEDGWDL------FC-------------SLSLKGVKPN 94
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
V T T+I G CK G E+A L+ M + P+ YN+ I + + L+
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIK 154
Query: 282 ELRK-RKLLDATTFNTLISGYSNSGQIDEAF 311
E+R R DA+T+ L++ + G++D+ F
Sbjct: 155 EMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 184
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 278 NLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
L E+ +R L+ T T+ TLI G +G D A + EM S G+ + +TYN L++ L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 337 CKNGCDEEAK---------ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
CKNG E+A +L + ++G++P+ +TYTT+I+ F KK EE L M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 388 ILKGVIPDQKTYDAIVTPFL 407
G +PD TY+ ++ L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHL 141
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 12/165 (7%)
Query: 7 GGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGL--- 63
G + L+ G + G D+A ++ K+M + V P+ ++YN +++G CK G L
Sbjct: 14 GNTVTYTTLIQGLFQAGDCDMAQEIFKEM---VSDGVPPDIMTYNILLDGLCKNGKLEKA 70
Query: 64 LLAEEV------LGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 117
L+A +V + G +P+V TY T+I G+ + G EE+ L +M E G P+
Sbjct: 71 LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDS 130
Query: 118 VVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
YN+++ R GD +++++ +M D +Y ++T+ L
Sbjct: 131 GTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 9/175 (5%)
Query: 32 MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDG 91
M+ M+ + N+V+Y ++I G + G +A+E+ +MV G P + TY L+DG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 92 YARWGSLEESL---------RLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+ G LE++L L + +G+ PN+V Y +++ + G EEA +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYI 197
M + PD +Y L R+G + +L ++ DA + ++ + +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 25/156 (16%)
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
M RGL + T T+I G + G+ + A ++ M+ P++ YN ++GLCK +
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK--N 64
Query: 273 TDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTL 332
+ K LV +G++++ + L + G+ N VTY T+
Sbjct: 65 GKLEKALV-----------------------AGKVEDGWDLFCSLSLKGVKPNVVTYTTM 101
Query: 333 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
I+ CK G EEA L + M G PD TY TLI
Sbjct: 102 ISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 172 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 231
++L ++ + L+ + + L+ + ++ M++ G+PPD+ T ++DG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 232 NCKLGNTEKAL---------RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE 282
CK G EKAL L+ + +PN+ Y + I+G CK + A L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 283 LRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+++ L D+ T+NTLI + G + L EM+S + + TY + ++L
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 141/324 (43%), Gaps = 36/324 (11%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
+YN+ + G A+++ M G PS + + LI +A + ++M
Sbjct: 160 AYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKM 219
Query: 109 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 168
+ G P + +YN I+ L ++G + A V D + + + ++ IL +GLC+ G +
Sbjct: 220 KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRI 279
Query: 169 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
E L++ L + +CK PDV+ +
Sbjct: 280 EEMLEI---------------LQRMRENLCK--------------------PDVFAYTAM 304
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-KRK 287
I GN + +LR+++ M + + +P++ Y + + GLCK + L E++ K+
Sbjct: 305 IKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI 364
Query: 288 LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
L+D + LI G+ G++ A L ++ G A+ YN +I LC ++A +
Sbjct: 365 LIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYK 424
Query: 348 LMKMMIMQGIRPDCITYTTLITHF 371
L ++ I + + PD T + ++ +
Sbjct: 425 LFQVAIEEELEPDFETLSPIMVAY 448
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 174/427 (40%), Gaps = 41/427 (9%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++D K G DLAL V + + + S ++ ++ G CK G + E+L M
Sbjct: 234 IMDALVKNGYFDLALAVYEDFK---EDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMR 290
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ +P V Y +I G+L+ SLR+ DEM + P+++ Y +++ L + G +E
Sbjct: 291 ENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVE 350
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
++ +M K I D+ Y +L EG +G + A L ++ I D N ++
Sbjct: 351 RGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVI 410
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYT----------------KATVIDGNCKLG-N 237
+C I L PD T + V++ +LG
Sbjct: 411 KGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYP 470
Query: 238 TEKALRLYNGMIKMDEQPN-----------------LTIYNSFINGLCKMASTDVAKNLV 280
L + ++ DE+ N +++YN + L KM + +L
Sbjct: 471 VSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLF 530
Query: 281 DELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
E+RK D+++++ I + G + A ++ + + Y +L LC+
Sbjct: 531 YEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQI 590
Query: 340 GCDEEAKELMKMMIMQGIR--PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
G + +A L+ + + P Y + H K + E+V+ + D M +GV ++
Sbjct: 591 G-EIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEV 649
Query: 398 TYDAIVT 404
Y AI++
Sbjct: 650 IYCAIIS 656
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 146/359 (40%), Gaps = 8/359 (2%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P YN I++ K G LA V D + G T+ L+ G + G +EE L +
Sbjct: 226 PRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEI 285
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
M E P++ Y +++ L G+++ + +V +M I PD +Y L GLC+
Sbjct: 286 LQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCK 345
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
+G + +L ++ ++ D +L+ ++ G D+
Sbjct: 346 DGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGI 405
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
VI G C + +KA +L+ I+ + +P+ + + M N+++ +
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIG 465
Query: 285 K--RKLLDATT--FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
+ + D T F L + + + F + +K+ G + V YN L+ L K G
Sbjct: 466 ELGYPVSDYLTQFFKLLCADEEKNAMALDVFYI---LKTKGHGSVSV-YNILMEALYKMG 521
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 399
+++ L M G PD +Y+ I F +K + + H+ +I +P Y
Sbjct: 522 DIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAY 580
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 121/300 (40%), Gaps = 1/300 (0%)
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
++G + YN+ Y L R+G A ++ M + P + + IL N
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 229
++ ++ KF F N +++ + K+ GL + T ++
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL- 288
G CK G E+ L + M + +P++ Y + I L + D + + DE+R+ ++
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 289 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
D + TL+ G G+++ + L EMK + +R Y LI +G A L
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390
Query: 349 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
+ ++ G D Y +I + ++ L I + + PD +T I+ +++
Sbjct: 391 WEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVV 450
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/402 (20%), Positives = 161/402 (40%), Gaps = 49/402 (12%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G+LD +L+V +M + + P+ ++Y +++ G CK G + E+ +M
Sbjct: 312 GNLDASLRVWDEMR---RDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDR 368
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
Y LI+G+ G + + L +++V+ G +I +YN+++ L +++A K+
Sbjct: 369 EIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQV 428
Query: 143 MIDKHICPD-------QYSYAILTE--------------GLCRNGYLTEALKLHNQILKF 181
I++ + PD +Y ++ G + YLT+ KL L
Sbjct: 429 AIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKL----LCA 484
Query: 182 DLIEDAFSL-----------------NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
D ++A +L NIL+ + K M G PD +
Sbjct: 485 DEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSS 544
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+ I + G+ + A + +I+M P++ Y S GLC++ D LV E
Sbjct: 545 YSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECL 604
Query: 285 KRKLLDATTFNTLIS--GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
F ++ ++ + EM G+ N V Y +I+ + K+G
Sbjct: 605 GNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTI 664
Query: 343 EEAKELMKMMIMQGI--RPDCITYTTLITHFNKKHHPEEVIA 382
+ A+E+ + + + D + Y ++ KK + V++
Sbjct: 665 KVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLS 706
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 43/250 (17%)
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
SV Y L++ + G +++SL L EM + G P+ Y+ + GD++ A
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+I+ P +Y LT+GLC+ G + + L + L
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECL--------------------- 604
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
+ G P + A + CK N EK +++ + M + N IY
Sbjct: 605 -----------GNVESG--PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIY 651
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKLL---DATTFNTLISGYSNSGQID------EAF 311
+ I+G+ K + VA+ + EL+KRK++ D + ++ + D + F
Sbjct: 652 CAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFF 711
Query: 312 GLTTEMKSLG 321
GL +++++ G
Sbjct: 712 GLESKLRAKG 721
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 169 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
T L L+N + + N+ + KS M+ RG+ PD T T+
Sbjct: 157 TAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTI 216
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
I + G ++A+ + M +P+ + I+ + + D+A +L D R K
Sbjct: 217 ISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKW 276
Query: 289 -LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKE 347
+DA TF+TLI Y SG D + EMK+LG+ N V YN LI+ + + +AK
Sbjct: 277 RIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKI 336
Query: 348 LMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 392
+ K +I G P+ TY L+ + + + ++ +A++ M KG+
Sbjct: 337 IYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGL 381
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 156/372 (41%), Gaps = 22/372 (5%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEV---LGDMVKAGFEP--------------SVRTYAT 87
PN +I GF GG L ++ L +M P V Y
Sbjct: 124 PNEADVCDVITGF---GGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 180
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
+ + + LE+S +L DEM+ERG+ P+ + +I+ ++G + A + M
Sbjct: 181 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 240
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
PD + A + + R G + AL L+++ DA + + L+ S
Sbjct: 241 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 300
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
M G+ P++ +ID + +A +Y +I PN + Y + +
Sbjct: 301 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 360
Query: 268 CKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSL-GLSAN 325
+ D A + E++++ L L +NTL+S +++ +DEAF + +MK+ +
Sbjct: 361 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 420
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 385
T+++LI + +G EA+ + M G P T++I + K ++V+ D
Sbjct: 421 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 480
Query: 386 YMILKGVIPDQK 397
++ G+ PD +
Sbjct: 481 QVLELGITPDDR 492
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Query: 22 TGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPS 81
+G+ D L + ++M + V PN V YN +I+ + A+ + D++ GF P+
Sbjct: 293 SGNYDGCLNIYEEMKAL---GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPN 349
Query: 82 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLS 141
TYA L+ Y R +++L + EM E+GL +++YN++L + ++EA ++
Sbjct: 350 WSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQ 409
Query: 142 DMIDKHIC-PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
DM + C PD ++++ L +G ++EA Q+ + F L ++ K+
Sbjct: 410 DMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKA 469
Query: 201 XXXXXXXXXXGSMITRGLPPD 221
++ G+ PD
Sbjct: 470 KQVDDVVRTFDQVLELGITPD 490
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Query: 234 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL---- 289
K + EK+ +L++ M++ +P+ + + I+ C V K V+ K
Sbjct: 187 KSKDLEKSEKLFDEMLERGIKPDNATFTTIIS--CAR-QNGVPKRAVEWFEKMSSFGCEP 243
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
D T +I Y +G +D A L ++ + VT++TLI + +G + +
Sbjct: 244 DNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIY 303
Query: 350 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ M G++P+ + Y LI + P + ++ +I G P+ TY A+V +
Sbjct: 304 EEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 360
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 185/405 (45%), Gaps = 28/405 (6%)
Query: 13 WVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 72
+ L+ G G + L ++ +M N + + YN + G+CK + EEVLG
Sbjct: 807 YALIKGLSLAGKM---LDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGL 863
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN-----IVVYNSILYWL 127
MV+ SV++Y Y R LE + E L +++YN +++++
Sbjct: 864 MVRKNIICSVKSYRE----YVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYM 919
Query: 128 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDA 187
+R + E +KVL +M + + PD+ ++ L G + + +L+ + ++ + +
Sbjct: 920 FRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNN 979
Query: 188 FSLNILLNYICKSXXXXXXXXXXGSMITRG--LPPDVYTKATVIDGNCKLGNTEKALRL- 244
SL + + +C + M ++G L V + +++ G KA
Sbjct: 980 RSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSV-VQTKIVETLISKGEIPKAEDFL 1038
Query: 245 ----YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE-LRKRKLLDATTFNTLIS 299
NGM+ PN Y++ I L + D+A +L++ L+ + + +++++++I+
Sbjct: 1039 TRVTRNGMM----APN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVIN 1091
Query: 300 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
G Q+D+A TEM LGLS + T++ L++ C+ E++ L+K M+ G P
Sbjct: 1092 GLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESP 1151
Query: 360 DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+ T+I F + + + + + M G D +T+ ++++
Sbjct: 1152 SQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLIS 1196
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 137/369 (37%), Gaps = 49/369 (13%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
NS Y+ I G+ +K E++L + + +EP V ++ R E +
Sbjct: 290 NSSIYSKITIGYNEKQDF---EDLLSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYM 346
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+E+ G + V + ++ W GD++ A LS+++ K PD YSY + GL R
Sbjct: 347 EELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRK 406
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G + +++ + ++ + I++ CK+ M GL +
Sbjct: 407 GLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVE 466
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT---IYNSFINGLCKMASTDVAKNLVDE 282
+ + +G A+RL K D + ++ NGL D + V+
Sbjct: 467 DPLSEAFSLVGFDPLAVRL-----KRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNM 521
Query: 283 LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLG--------------LSANRV- 327
+ R +L FN+LI S G + A L EM G L A+R
Sbjct: 522 VLDRSVL--PEFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAH 579
Query: 328 ---------------------TYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
T N L+ CK G +K + M+ D +TYT+
Sbjct: 580 LRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTS 639
Query: 367 LITHFNKKH 375
LI F KK
Sbjct: 640 LIRCFCKKE 648
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 106/254 (41%), Gaps = 7/254 (2%)
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL---FPNIVVYNSILYWLYR 129
M + G P Y LID R E + R+C + VE NI ++ L
Sbjct: 209 MRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCL 268
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
++EA + ++ + Y+ +T G + L ++ K++ D F
Sbjct: 269 DQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEV-KYE--PDVFV 325
Query: 190 LNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
N +L+ +C+ + G D T +I C G+ ++A+ + ++
Sbjct: 326 GNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIM 385
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR-KLLDATTFNTLISGYSNSGQID 308
+P++ YN+ ++GL + ++DE+++ +L +TF +++GY + Q +
Sbjct: 386 SKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFE 445
Query: 309 EAFGLTTEMKSLGL 322
EA + +M GL
Sbjct: 446 EAKRIVNKMFGYGL 459
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 142/369 (38%), Gaps = 62/369 (16%)
Query: 53 IINGFCKKGGLLLAE-EVLGD-MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
I G K+ LLL E E GD MV G + LI Y +++ L D M
Sbjct: 158 IREGMVKEVELLLMEMERHGDTMVNEGI------FCDLIGKYVDDFDSRKAVMLFDWMRR 211
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID-----KHICPDQYSYAILTEGLCRN 165
+GL P Y ++ L R E A ++ D ++ H+ D S + E LC +
Sbjct: 212 KGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNID--SIGKVIELLCLD 269
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
+ EA L +++ +L +LN +Y+K
Sbjct: 270 QKVQEARVLARKLV---------ALGCILN------------------------SSIYSK 296
Query: 226 ATVIDGNCKLGNTEKA----LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
T+ G EK L + G +K +P++ + N ++ LC+ ++ A ++
Sbjct: 297 ITI-------GYNEKQDFEDLLSFIGEVKY--EPDVFVGNRILHSLCRRFGSERAYVYME 347
Query: 282 ELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
EL D TF LI G I A +E+ S G + +YN +++ L + G
Sbjct: 348 ELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKG 407
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 400
+ ++ M G+ T+ ++T + K EE + + M G+I K D
Sbjct: 408 LWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVED 467
Query: 401 AIVTPFLLA 409
+ F L
Sbjct: 468 PLSEAFSLV 476
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 106/276 (38%), Gaps = 40/276 (14%)
Query: 29 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 88
L+V K + M G V P+ ++N +++G+ + L M+ G +P+ R+ +
Sbjct: 926 LEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAV 985
Query: 89 IDGYARWGSLEESLRLCDEMVERG------------------------------------ 112
G ++++L L M +G
Sbjct: 986 TSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNG 1045
Query: 113 -LFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 171
+ PN Y++I+ L G+++ A +L+ M+ P SY + GL R L +A
Sbjct: 1046 MMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKA 1102
Query: 172 LKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDG 231
+ H ++++ L + + L++ C++ SM+ G P TVID
Sbjct: 1103 MDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDR 1162
Query: 232 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
NT KA + M K + + + S I+ +
Sbjct: 1163 FRVEKNTVKASEMMEMMQKCGYEVDFETHWSLISNM 1198
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 164/388 (42%), Gaps = 22/388 (5%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C G L AL M + G Y++++N K L + V M+K +
Sbjct: 31 CSNGRLQEALLEMAMLGPEMGFH------GYDALLNACLDKRALRDGQRVHAHMIKTRYL 84
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P+ L+ Y + LE++ ++ DEM E+ N+V + +++ + G EA V
Sbjct: 85 PATYLRTRLLIFYGKCDCLEDARKVLDEMPEK----NVVSWTAMISRYSQTGHSSEALTV 140
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
++M+ P+++++A + R L ++H I+K++ F + LL+ K
Sbjct: 141 FAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 200
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
+ + R DV + +I G +LG E+AL +++ + PN
Sbjct: 201 AGQIKEAREIFECLPER----DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
Y S + L +A D K + +R+L A N+LI YS G + A L M
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI-MQGIRPDCITYTTLITHFNKKHHP 377
+++N ++ K+G E EL ++M + ++PD +T +++ +
Sbjct: 317 ----ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRME 372
Query: 378 EEVIALHDYMILK--GVIPDQKTYDAIV 403
+ + + D M+ G P + Y IV
Sbjct: 373 DTGLNIFDGMVAGEYGTKPGTEHYGCIV 400
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 138/336 (41%), Gaps = 50/336 (14%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
+TG AL V +M G PN ++ +++ + GL L +++ G +VK ++
Sbjct: 130 QTGHSSEALTVFAEMMRSDGK---PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
+ ++L+D YA+ G ++E+ + + + ER ++V +I+ + G EEA ++
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPER----DVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+ + + P+ +YA L L L + H +L+
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR-------------------- 282
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
R LP + ++ID K GN A RL++ M E+ ++ +
Sbjct: 283 ---------------RELPFYAVLQNSLIDMYSKCGNLSYARRLFD---NMPERTAIS-W 323
Query: 261 NSFINGLCKMASTDVAKNLVDELR--KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
N+ + G K L +R KR DA T ++SG S+ D + M
Sbjct: 324 NAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMV 383
Query: 319 S--LGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
+ G Y ++++L + G +EA E +K M
Sbjct: 384 AGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRM 419
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 5/299 (1%)
Query: 59 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 118
K+ L L E+L + G T+ LID R G ++ + L M + + +
Sbjct: 156 KRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPR 215
Query: 119 VYNSILYWLYRHGDME--EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN 176
+Y+ +L + +H D + L D+ P Y ++ L G E + + N
Sbjct: 216 LYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLN 275
Query: 177 QILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 235
Q +K D +E D I+L + ++ GL PDVYT I+G CK
Sbjct: 276 Q-MKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQ 334
Query: 236 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTF 294
+ E AL++ + M K+ +PN+ YN I L K AK L E+ + ++ TF
Sbjct: 335 NDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTF 394
Query: 295 NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI 353
+ +IS Y ++ A GL E ++ + +I+ LC+ G ++A EL+ ++
Sbjct: 395 DIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
+V+ +N M + V P+ V Y ++ G A+++ +++ G P V TY I
Sbjct: 269 EVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYI 328
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 149
+G + +E +L++ M + G PN+V YN ++ L + GD+ A + +M +
Sbjct: 329 NGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVN 388
Query: 150 PDQYSYAILT-------EGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
+ +++ I+ E +C +G L EA + N +K IE+ S
Sbjct: 389 RNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM-NVFVKSSRIEEVIS 434
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 140/371 (37%), Gaps = 46/371 (12%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDM-VKAGFEPSVRTYATLIDGYARWGSLEESLR 103
P +Y +I K L VL + V F+ + +I Y G +EE++
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIE 129
Query: 104 LCDEMVERGLFPNIVVYNSILYWLYR-HGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
+ ++ P+ N++L L R +E ++L + ++ ++ IL + L
Sbjct: 130 VFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDAL 189
Query: 163 CRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX------XXXXXXGSMITR 216
CR G + A +L + + +I D + LL+ +CK + +
Sbjct: 190 CRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSP 249
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
GL +++G G ++ + + N M +P+L Y + G+ +A D
Sbjct: 250 GLRDYTVVMRFLVEG----GRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGV--IADEDYP 303
Query: 277 KNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
K KL D E+ LGL+ + TYN IN L
Sbjct: 304 K-------ADKLFD-------------------------ELLLLGLAPDVYTYNVYINGL 331
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK E A ++M M G P+ +TY LI K L M GV +
Sbjct: 332 CKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNS 391
Query: 397 KTYDAIVTPFL 407
T+D +++ ++
Sbjct: 392 HTFDIMISAYI 402
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 130/317 (41%), Gaps = 41/317 (12%)
Query: 44 WPNSV-SYNSIINGFCKKGGLLLAEEVLGDMVKA---GFEPSVRTYATLIDGYARWGSLE 99
+P + ++N +I C G LA +V+ +K+ + P +Y ++ +
Sbjct: 183 YPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYK 239
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
+ ++M+E G P+++ YN +++ +R G + ++L +M+ PD Y+Y IL
Sbjct: 240 LIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILL 299
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
L AL L N + + + L++ + ++ + G
Sbjct: 300 HHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCT 359
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PDV +I G G EKA ++ M + + PN+ YNS I G C
Sbjct: 360 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCM---------- 409
Query: 280 VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
+G+ EA L EM+S G + N V Y+TL+N L
Sbjct: 410 ------------------------AGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNA 445
Query: 340 GCDEEAKELMKMMIMQG 356
G EA E++K M+ +G
Sbjct: 446 GKVLEAHEVVKDMVEKG 462
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 120/303 (39%), Gaps = 36/303 (11%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C G LA V+++ + P SYN+I++ L + V M++ GF
Sbjct: 195 CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFT 254
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P V TY ++ R G + RL DEMV+ G P++ YN +L+ L A +
Sbjct: 255 PDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNL 314
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
L+ M + + P + L +GL R G L ++ +K
Sbjct: 315 LNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKV------------------ 356
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
G PDV +I G G EKA ++ M + + PN+
Sbjct: 357 -----------------GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
YNS I G C A L+ E+ R + ++TL++ N+G++ EA + +M
Sbjct: 400 YNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMV 459
Query: 319 SLG 321
G
Sbjct: 460 EKG 462
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 132/321 (41%), Gaps = 7/321 (2%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ F + Y L+ +A G + RL DEM++ G +N ++ G+
Sbjct: 145 QENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTC---GEAG 201
Query: 135 EASKVLSDMIDKHIC---PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
A V+ I P ++SY + L ++ Q+L+ D + N
Sbjct: 202 LARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYN 261
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
I++ + M+ G PD+YT ++ AL L N M ++
Sbjct: 262 IVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREV 321
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 310
+P + + + I+GL + + K +DE K D + +I+GY + G++++A
Sbjct: 322 GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
+ EM G N TYN++I C G +EA L+K M +G P+ + Y+TL+ +
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNN 441
Query: 371 FNKKHHPEEVIALHDYMILKG 391
E + M+ KG
Sbjct: 442 LKNAGKVLEAHEVVKDMVEKG 462
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 5/165 (3%)
Query: 29 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 88
L + +N M V P + + ++I+G + G L + + + VK G P V Y +
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368
Query: 89 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 148
I GY G LE++ + EM E+G PN+ YNS++ G +EA +L +M +
Sbjct: 369 ITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGC 428
Query: 149 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
P+ Y+ L L G + EA ++++K D++E ++++
Sbjct: 429 NPNFVVYSTLVNNLKNAGKVLEA----HEVVK-DMVEKGHYVHLI 468
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 133/351 (37%), Gaps = 52/351 (14%)
Query: 62 GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 121
GLL+ E ++G + F+ R A L + W +E+ R Y+
Sbjct: 109 GLLVREVLVGILRTLSFDNKTRC-AKLAYKFFVWCGGQENFR-----------HTANCYH 156
Query: 122 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK- 180
++ G+ + +++ +MI ++ +L +C G A + Q +K
Sbjct: 157 LLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL---ICTCGEAGLARDVVEQFIKS 213
Query: 181 --FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 238
F+ S N +L+ + M+ G PDV T V+ N +LG T
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 298
++ RL + M+K P+L T+N L+
Sbjct: 274 DRLYRLLDEMVKDGFSPDLY----------------------------------TYNILL 299
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 358
+ + A L M+ +G+ + + TLI+ L + G E K M + G
Sbjct: 300 HHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCT 359
Query: 359 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
PD + YT +IT + E+ + M KG +P+ TY++++ F +A
Sbjct: 360 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 7/293 (2%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE--EVLGDMVKAGF 78
+TG ++A++ K+M M + P+S ++ +I C+K G + E +M+++GF
Sbjct: 725 RTGLTNIAIRTFKEMKDM---GLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGF 781
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
P + G+ +++ D + + G FP V Y+ + L R G +EEA
Sbjct: 782 VPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALCRIGKLEEALS 840
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
L+ + DQY+Y + GL + G L +AL N + + L+ Y
Sbjct: 841 ELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFF 900
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
K M P V T +I G LG E+A + M + P+
Sbjct: 901 KEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFK 960
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEA 310
Y+ FIN LC+ ++ A L+ E+ + + +T F T+ G + G+ D A
Sbjct: 961 TYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 149/345 (43%), Gaps = 9/345 (2%)
Query: 46 NSVSYN-SIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
NS +YN SI C K + +M + G + T+A +I Y R G ++R
Sbjct: 677 NSEAYNMSIKVAGCGKD-FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRT 735
Query: 105 CDEMVERGLFPNIVVYNSILYWL--YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGL 162
EM + GL P+ + ++ L + ++EEA++ +MI PD+ L
Sbjct: 736 FKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCL 795
Query: 163 CRNGYLTEALKLHNQILKFDL-IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPD 221
C G +A + + K + A+S I + +C+ S D
Sbjct: 796 CEVGNTKDAKSCLDSLGKIGFPVTVAYS--IYIRALCRIGKLEEALSELASFEGERSLLD 853
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
YT +++ G + G+ +KAL N M ++ +P + +Y S I K +
Sbjct: 854 QYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQ 913
Query: 282 ELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
++ + T+ +I GY + G+++EA+ M+ G S + TY+ IN LC+
Sbjct: 914 KMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQAC 973
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKK-HHPEEVIALH 384
E+A +L+ M+ +GI P I + T+ N++ H IAL
Sbjct: 974 KSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQ 1018
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 156/382 (40%), Gaps = 52/382 (13%)
Query: 8 GC---IKEWVLL----DGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKK 60
GC I+ W +L A K G L + M+K ++ +YN +I C
Sbjct: 219 GCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFEL------DATAYNIMIRSLCIA 272
Query: 61 GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVY 120
G LA E +M++ G +RTY L+D A+ ++ + D+MV +
Sbjct: 273 GRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAF 332
Query: 121 NSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 180
+L G ++EA +++ ++ +K +C D + IL +GLCR + +AL++ + I+K
Sbjct: 333 GYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD-IMK 391
Query: 181 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 240
++D+ I+++ + + G PP V T ++ KL EK
Sbjct: 392 RRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEK 451
Query: 241 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISG 300
L+N MI+ +P D+ +++G
Sbjct: 452 GCNLFNEMIENGIEP----------------------------------DSVAITAVVAG 477
Query: 301 YSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG--IR 358
+ ++ EA+ + + M+ G+ +Y+ + LC++ +E ++ M IR
Sbjct: 478 HLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIR 537
Query: 359 PDCITYTTLITHFNKKHHPEEV 380
D ++ +I+ K E++
Sbjct: 538 DDIFSW--VISSMEKNGEKEKI 557
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 143/354 (40%), Gaps = 35/354 (9%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
YN++++ + L + +E++ +M K G + +RT+ LI Y + + + L + ++M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
+ G + YN ++ L G + A + +M++K I +Y +L + + ++ +
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 229
+ + +++ I + + LL C S
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVS----------------------------- 342
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 289
G ++AL L + + + + + GLC+ A +VD +++RKL
Sbjct: 343 ------GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD 396
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
D+ + +ISGY + +A +K G TY ++ L K E+ L
Sbjct: 397 DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLF 456
Query: 350 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
MI GI PD + T ++ ++ E + M KG+ P K+Y V
Sbjct: 457 NEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFV 510
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 4/275 (1%)
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
D ++ + +M + Q ++AI+ R G A++ ++ LI + +
Sbjct: 693 DFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFK 752
Query: 192 ILLNYIC--KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
L+ +C K MI G PD + C++GNT+ A + +
Sbjct: 753 CLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLG 812
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVA-KNLVDELRKRKLLDATTFNTLISGYSNSGQID 308
K+ P Y+ +I LC++ + A L +R LLD T+ +++ G G +
Sbjct: 813 KIG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQ 871
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+A MK +G Y +LI K E+ E + M + P +TYT +I
Sbjct: 872 KALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMI 931
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ EE M +G PD KTY +
Sbjct: 932 CGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFI 966
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G + G L K + K+N M P Y S+I F K+ L E M
Sbjct: 860 IVHGLLQRGDLQ---KALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKME 916
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
EPSV TY +I GY G +EE+ M ERG P+ Y+ + L + E
Sbjct: 917 GESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSE 976
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNG 166
+A K+LS+M+DK I P ++ + GL R G
Sbjct: 977 DALKLLSEMLDKGIAPSTINFRTVFYGLNREG 1008
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 127/298 (42%), Gaps = 4/298 (1%)
Query: 112 GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTE 170
G + +YN++L +++ +++S+M +K+ C D ++ IL + + +
Sbjct: 184 GFSHRVGIYNTMLSIAGEARNLDMVDELVSEM-EKNGCDKDIRTWTILISVYGKAKKIGK 242
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 230
L + ++ K DA + NI++ +C + M+ +G+ + T ++D
Sbjct: 243 GLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD 302
Query: 231 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-L 289
K + + + M+++ E + + C A L+ EL+ +++ L
Sbjct: 303 CIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCL 362
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
DA F L+ G + ++ +A + MK L + V Y +I+ + +A E
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQF 421
Query: 350 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
+++ G P TYT ++ H K E+ L + MI G+ PD A+V L
Sbjct: 422 EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHL 479
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 2/193 (1%)
Query: 217 GLPPDVYTKATVIDGNC--KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
GL P T +I C K N E+A R + MI+ P+ + ++ LC++ +T
Sbjct: 743 GLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTK 802
Query: 275 VAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
AK+ +D L K ++ I G+++EA + ++ TY ++++
Sbjct: 803 DAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVH 862
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
L + G ++A + + M G +P YT+LI +F K+ E+V+ M + P
Sbjct: 863 GLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEP 922
Query: 395 DQKTYDAIVTPFL 407
TY A++ ++
Sbjct: 923 SVVTYTAMICGYM 935
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 241 ALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLI 298
A+R +N + + D + IYN+ ++ + + D+ LV E+ K D T+ LI
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR 358
S Y + +I + + +M+ G + YN +I LC G + A E K M+ +GI
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 291
Query: 359 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
TY L+ K + V ++ D M+ I + + ++ F ++
Sbjct: 292 FGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVS 342
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 153/349 (43%), Gaps = 38/349 (10%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
Y ++I+ K G + EV M +G E ++ T+ LIDG AR G + ++ +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM-IDKH-ICPDQYSYAILTEGLCRNGY 167
+ + P+ VV+N+++ + G ++ A VL++M + H I PD S L + C G
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
+ A +++ I K+ + RG P+VYT A
Sbjct: 625 VERAKEVYQMIHKYGI--------------------------------RGT-PEVYTIA- 650
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
++ K G+ + A +Y M + D P+ +++ I+ D A ++ + + +
Sbjct: 651 -VNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQG 709
Query: 288 L-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
+ L ++++L+ N+ +A L ++KS+ L T N LI LC+ +A
Sbjct: 710 IRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAM 769
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
E + + G++P+ ITY+ L+ +K E L GV P+
Sbjct: 770 EYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 139/323 (43%), Gaps = 3/323 (0%)
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P++ T+ L+ A +E + + + E G+ + +Y +++ + G ++ +V
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
M + + + +++ L +G R G + +A + + ++ D N L++ +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 200 SXXXXXXXXXXGSMITRGLP--PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 257
S M P PD + ++ C G E+A +Y + K +
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 258 TIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTE 316
+Y +N K D A ++ +++++ + D F+ LI ++ +DEAFG+ +
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
KS G+ ++Y++L+ C ++A EL + + +RP T LIT + +
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 377 PEEVIALHDYMILKGVIPDQKTY 399
+ + D + G+ P+ TY
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITY 787
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 163/366 (44%), Gaps = 16/366 (4%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMV--KAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
V++ S+I+G CK G A +V GDM +P ++ + A +L L++
Sbjct: 440 VAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVH 499
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
M++ GL N+ V +S++ + G E A KV + M +++ ++ + RN
Sbjct: 500 GSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV----AWNSMISCYSRN 555
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
++ L N +L + D+ S+ +L I + G + G+P D + K
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 615
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+ID K G ++ A ++ M + +L +N I G A +L DE++K
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKM----QHKSLITWNLMIYGYGSHGDCITALSLFDEMKK 671
Query: 286 R-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS-LGLSANRVTYNTLINLLCKNGCDE 343
+ D TF +LIS ++SG ++E + MK G+ N Y +++LL + G E
Sbjct: 672 AGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLE 731
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
EA +K M I D + L++ ++ HH E+ L +L+ TY ++
Sbjct: 732 EAYSFIKAM---PIEADSSIWLCLLSA-SRTHHNVELGILSAEKLLRMEPERGSTYVQLI 787
Query: 404 TPFLLA 409
++ A
Sbjct: 788 NLYMEA 793
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 169/408 (41%), Gaps = 31/408 (7%)
Query: 3 LIGSGGCIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGG 62
++G GG G C++ SLDL + L NSV S S+ + +
Sbjct: 244 IVGFGG--------SGICES-SLDLYM-------LAKNNSVKLVSTSFTGALGACSQSEN 287
Query: 63 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 122
++ D+VK G +L+ Y++ G + E+ + +V++ L ++N+
Sbjct: 288 SGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL----EIWNA 343
Query: 123 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 182
++ + A + M K + PD ++ + + G +H ++ K
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 183 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 242
+ + + LL K SM + D+ ++I G CK G ++AL
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK----DMVAWGSLISGLCKNGKFKEAL 459
Query: 243 RLYNGMIKMDE--QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLIS 299
+++ M D+ +P+ I S N + + + + K L L+ ++LI
Sbjct: 460 KVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLID 519
Query: 300 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
YS G + A + T M + N V +N++I+ +N E + +L +M+ QGI P
Sbjct: 520 LYSKCGLPEMALKVFTSMS----TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFP 575
Query: 360 DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
D ++ T+++ + + +LH Y + G+ D +A++ ++
Sbjct: 576 DSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYV 623
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 157/371 (42%), Gaps = 28/371 (7%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAG-FEPSVRTYATLIDGYARWGSLEESLRLCD 106
S NS I +KG L A + + F SV T+ +L+ + +L +
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHG 84
Query: 107 EMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI---CPDQYSYAILTEGLC 163
+V G + + S++ + G ++ A +V D + + +G
Sbjct: 85 SVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK--SXXXXXXXXXXGSMITRGLPPD 221
+ E + ++L F + DAFSL+I+++ +CK + G M+ L D
Sbjct: 145 KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTD 204
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI-----NGLCKMASTD-- 274
+ K +ID K G + A R++ ++++++ N+ ++N I +G+C+ +S D
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVF---VEIEDKSNVVLWNVMIVGFGGSGICE-SSLDLY 260
Query: 275 -VAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 333
+AKN KL+ +T+F + S S + ++ +GL + +L+
Sbjct: 261 MLAKN-----NSVKLV-STSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL 314
Query: 334 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVI 393
++ K G EA+ + ++ + + + ++ + + + + L +M K V+
Sbjct: 315 SMYSKCGMVGEAETVFSCVVDKRLE----IWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 394 PDQKTYDAIVT 404
PD T +++
Sbjct: 371 PDSFTLSNVIS 381
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 139/325 (42%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
++ +YN+++ F KG A E+ M K TY +I A+ G L+ + +L
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+M ER L P+ V++S++ + + G ++ + KV +M P + L + +
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G L AL+L +++ K + +++ KS M G P T
Sbjct: 397 GKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+ +++ + G + A+++YN M +P L+ Y S + L DVA ++ E++
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516
Query: 286 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
+ ++ Y +D A M S G+ N L KNG + A
Sbjct: 517 MGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSA 576
Query: 346 KELMKMMIMQGIRPDCITYTTLITH 370
+ L++ ++ + D + YT+++ H
Sbjct: 577 RPLLETLVHSAGKVDLVLYTSILAH 601
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 12/173 (6%)
Query: 15 LLDGA---------CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLL 65
LLDG+ K+G LD A K+ ++M + P+ ++S+++ K G L
Sbjct: 310 LLDGSTYELIIPSLAKSGRLDAAFKLFQQMK---ERKLRPSFSVFSSLVDSMGKAGRLDT 366
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILY 125
+ +V +M G PS + +LID YA+ G L+ +LRL DEM + G PN +Y I+
Sbjct: 367 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
+ G +E A V DM P +Y+ L E +G + A+K++N +
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 280
D T +I K G + A +L+ M + +P+ ++++S ++ + K D + +
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 281 DELRKR-KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
E++ AT F +LI Y+ +G++D A L EMK G N Y +I K+
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431
Query: 340 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTY 399
G E A + K M G P TY+ L+ + + +++ M G+ P +Y
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Query: 400 DAIVT 404
+++T
Sbjct: 492 ISLLT 496
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 5/322 (1%)
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
++ T A ++ +A G EE++ + D + E GL N N +L L + +E+A VL
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+ HI P+ +++ I G C+ + EAL ++ S ++ C+
Sbjct: 214 LQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M G PP+ T T++ E+ALR+ M + +P+ Y
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 261 NSFINGLCKMASTDVAKNL--VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
N I+ L + + A+ + V+ ++ +T+N++I+ Y + + D+A L EM+
Sbjct: 333 NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 319 SLGLSANRV-TYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPDCITYTTLITHFNKKHH 376
S L V TY L+ K G E +L+K M+ + + D TYT LI + +
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANM 452
Query: 377 PEEVIALHDYMILKGVIPDQKT 398
E L + MI + + P +T
Sbjct: 453 CEWAYCLFEEMISQDITPRHRT 474
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 15/277 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LLD CK ++ A V+ L + + PN+ ++N I+G+CK + A + +M
Sbjct: 195 LLLDTLCKEKRVEQARVVL----LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEM 250
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
GF P V +Y T+I Y + + + EM G PN + Y +I+ L +
Sbjct: 251 KGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEF 310
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI- 192
EEA +V + M PD Y L L R G L EA ++ + ++ E S+N
Sbjct: 311 EEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA----ERVFRVEMPELGVSINTS 366
Query: 193 ----LLNYICKSXXXXXXXXXXGSMITRGL-PPDVYTKATVIDGNCKLGNTEKALRLYNG 247
++ C M + L PDV+T ++ K G+ + +L
Sbjct: 367 TYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKE 426
Query: 248 MI-KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
M+ K + + Y I LC+ + A L +E+
Sbjct: 427 MVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%)
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
T A ++ G E+A+ +++ + + + N N ++ LCK + A+ ++ +L
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 284 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+ +A TFN I G+ + +++EA EMK G ++Y T+I C+
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ E++ M G P+ ITYTT+++ N + EE + + M G PD Y+ ++
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
Y+ ++ L K D K V+ +R KL+ T ++ ++ +G+ +EA G+ +
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
GL N + N L++ LCK E+A+ ++ + + I P+ T+ I + K + EE
Sbjct: 184 FGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 380 VIALHDYMILKGVIPDQKTYDAIV 403
+ M G P +Y I+
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTII 266
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 142/322 (44%), Gaps = 5/322 (1%)
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
++ T A ++ +A G EE++ + D + E GL N N +L L + +E+A VL
Sbjct: 154 TLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL 213
Query: 141 SDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKS 200
+ HI P+ +++ I G C+ + EAL ++ S ++ C+
Sbjct: 214 LQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQ 272
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
M G PP+ T T++ E+ALR+ M + +P+ Y
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332
Query: 261 NSFINGLCKMASTDVAKNL--VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
N I+ L + + A+ + V+ ++ +T+N++I+ Y + + D+A L EM+
Sbjct: 333 NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
Query: 319 SLGLSANRV-TYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPDCITYTTLITHFNKKHH 376
S L V TY L+ K G E +L+K M+ + + D TYT LI + +
Sbjct: 393 SSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANM 452
Query: 377 PEEVIALHDYMILKGVIPDQKT 398
E L + MI + + P +T
Sbjct: 453 CEWAYCLFEEMISQDITPRHRT 474
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 15/277 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LLD CK ++ A V+ L + + PN+ ++N I+G+CK + A + +M
Sbjct: 195 LLLDTLCKEKRVEQARVVL----LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEM 250
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
GF P V +Y T+I Y + + + EM G PN + Y +I+ L +
Sbjct: 251 KGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEF 310
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI- 192
EEA +V + M PD Y L L R G L EA ++ + ++ E S+N
Sbjct: 311 EEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA----ERVFRVEMPELGVSINTS 366
Query: 193 ----LLNYICKSXXXXXXXXXXGSMITRGL-PPDVYTKATVIDGNCKLGNTEKALRLYNG 247
++ C M + L PDV+T ++ K G+ + +L
Sbjct: 367 TYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKE 426
Query: 248 MI-KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
M+ K + + Y I LC+ + A L +E+
Sbjct: 427 MVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%)
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
T A ++ G E+A+ +++ + + + N N ++ LCK + A+ ++ +L
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 284 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+ +A TFN I G+ + +++EA EMK G ++Y T+I C+
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ E++ M G P+ ITYTT+++ N + EE + + M G PD Y+ ++
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
Y+ ++ L K D K V+ +R KL+ T ++ ++ +G+ +EA G+ +
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
GL N + N L++ LCK E+A+ ++ + + I P+ T+ I + K + EE
Sbjct: 184 FGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 380 VIALHDYMILKGVIPDQKTYDAIV 403
+ M G P +Y I+
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTII 266
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 144/327 (44%), Gaps = 49/327 (14%)
Query: 72 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
+M K GF A +I+ Y R G E + ++ DEM ER + +N++L
Sbjct: 102 NMSKEGF------VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSK 155
Query: 132 DMEEASKVLSDMIDK-HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
+ + ++ K I PD SY L +GLC G TEA+ L ++I L D +
Sbjct: 156 KFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITF 215
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
NILL+ + YTK G E+ +++ M++
Sbjct: 216 NILLH-------------------------ESYTK----------GKFEEGEQIWARMVE 240
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDE 309
+ + ++ YN+ + GL ++ +L D+L+ +L D TF +I G+ + G++DE
Sbjct: 241 KNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDE 300
Query: 310 AFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
A E++ G + +N+L+ +CK G E A EL K + + + D ++
Sbjct: 301 AITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVD 360
Query: 370 HF---NKKHHPEEVIAL---HDYMILK 390
+K+ EE++ L +DY+ K
Sbjct: 361 ALVKGSKQDEAEEIVELAKTNDYLQCK 387
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
LL+ + DL + K+ L S+ P+ SYN++I G C KG A ++ ++
Sbjct: 146 ALLNACVNSKKFDLVEGIFKE--LPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEI 203
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
G +P T+ L+ G EE ++ MVE+ + +I YN+ L L
Sbjct: 204 ENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKS 263
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EE + + + PD +++ + +G G L EA+ + +I K F N L
Sbjct: 264 EEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSL 323
Query: 194 LNYICKS 200
L ICK+
Sbjct: 324 LPAICKA 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 91/184 (49%), Gaps = 2/184 (1%)
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
A +I+ ++G E A ++++ M + + + +N+ +N D+ + + EL
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 286 RKLL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+ + D ++NTLI G G EA L E+++ GL + +T+N L++ G E
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 344 EAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
E +++ M+ + ++ D +Y + ++ EE+++L D + + PD T+ A++
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 404 TPFL 407
F+
Sbjct: 290 KGFV 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 250 KMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQID 308
K+ +P++ YN+ I GLC S A L+DE+ + L D TFN L+ G+ +
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
E + M + + +YN + L EE L + ++PD T+T +I
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
F + +E I + + G P + +++++
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLL 324
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 154/355 (43%), Gaps = 49/355 (13%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LLD K G LD A V ++M + SV VSY S+I G+ ++G A ++ +M
Sbjct: 337 LLDMYSKCGDLDSAKAVFREM---SDRSV----VSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P V T +++ AR+ L+E R+ + + E L +I V N+++ + G M+
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA V S+M K I S+ + G +N Y EAL L N +L+ E FS
Sbjct: 450 EAELVFSEMRVKDI----ISWNTIIGGYSKNCYANEALSLFNLLLE----EKRFS----- 496
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
PD T A V+ L +K ++ +++
Sbjct: 497 -------------------------PDERTVACVLPACASLSAFDKGREIHGYIMRNGYF 531
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLT 314
+ + NS ++ K + +A L D++ + D ++ +I+GY G EA L
Sbjct: 532 SDRHVANSLVDMYAKCGALLLAHMLFDDIASK---DLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 315 TEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPDCITYTTLI 368
+M+ G+ A+ +++ +L+ +G +E +M + I P Y ++
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 124/298 (41%), Gaps = 15/298 (5%)
Query: 92 YARWGSLEESLRLCDEM-VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 150
Y G L+E+ R+ DE+ +E+ LF NI++ L + GD + + M+ +
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNE-----LAKSGDFSGSIGLFKKMMSSGVEM 193
Query: 151 DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX 210
D Y+++ +++ + +LH ILK E N L+ + K+
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVF 253
Query: 211 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 270
M R DV + ++I+G G EK L ++ M+ + +L S G
Sbjct: 254 DEMTER----DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 309
Query: 271 ASTDVAKNLVDELRKRKLLDATTF-NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 329
+ + + K F NTL+ YS G +D A + EM + V+Y
Sbjct: 310 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV----VSY 365
Query: 330 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
++I + G EA +L + M +GI PD T T ++ + +E +H+++
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/392 (19%), Positives = 166/392 (42%), Gaps = 17/392 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L++ K+G ++ + KKM + V +S +++ + F + E++ G +
Sbjct: 165 ILMNELAKSGDFSGSIGLFKKM---MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+K+GF +L+ Y + ++ + ++ DEM ER +++ +NSI+ +G
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLA 277
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
E+ V M+ I D + + G + ++ +H+ +K + N L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
L+ K M R V + ++I G + G +A++L+ M +
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRS----VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
P++ + +N + D K + + +++ L D N L+ Y+ G + EA
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG-IRPDCITYTTLITHF 371
+ +EM+ + +++NT+I KN EA L +++ + PD T ++
Sbjct: 454 VFSEMRVKDI----ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
++ +H Y++ G D+ +++V
Sbjct: 510 ASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 124/292 (42%), Gaps = 37/292 (12%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
YNS+++ C A ++ M++ G +P RTYA L++G+ G ++E+ DEM
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
RG P + ++ L G +E A +++S M PD ++ IL E + ++G +
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVE 304
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 229
++++ K GL D+ T T+I
Sbjct: 305 FCIEMYYTACKL-----------------------------------GLCVDIDTYKTLI 329
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKL 288
K+G ++A RL N ++ +P ++Y I G+C+ D A + +++ K
Sbjct: 330 PAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHP 389
Query: 289 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
+ + LI+ G+ +A EM +GL ++ + + L KNG
Sbjct: 390 PNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGL-KNG 440
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 2/292 (0%)
Query: 115 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 174
P + Y + L H E K+L M D + + + E +NG++ +A++L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 175 HNQILKFDLIEDAFSL-NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 233
N + K + + N LL+ +C MI +GL PD T A +++G C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 234 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DAT 292
G ++A + M + P + I GL + AK +V ++ K + D
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 293 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
TFN LI S SG+++ + LGL + TY TLI + K G +EA L+
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 353 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+ G +P Y +I + ++ + M +K P++ Y ++T
Sbjct: 349 VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLIT 400
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 132/320 (41%), Gaps = 2/320 (0%)
Query: 42 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 101
S P S+ Y + ++L M + S T +I+ Y + G ++++
Sbjct: 106 SYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQA 165
Query: 102 LRLCDEMVER-GLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 160
+ L + + + G + VYNS+L+ L A ++ MI K + PD+ +YAIL
Sbjct: 166 VELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVN 225
Query: 161 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 220
G C G + EA + +++ + A ++L+ + + M G P
Sbjct: 226 GWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP 285
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 280
D+ T +I+ K G E + +Y K+ ++ Y + I + K+ D A L+
Sbjct: 286 DIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLL 345
Query: 281 DE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
+ + + + +I G +G D+AF ++MK NR Y LI + +
Sbjct: 346 NNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRG 405
Query: 340 GCDEEAKELMKMMIMQGIRP 359
G +A + M G+ P
Sbjct: 406 GKFVDAANYLVEMTEMGLVP 425
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 120/298 (40%), Gaps = 41/298 (13%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL C A ++++M + P+ +Y ++NG+C G + A+E L +M
Sbjct: 188 LLHALCDVKMFHGAYALIRRM---IRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ GF P R LI+G G LE + + +M + G P+I +N ++ + + G++E
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVE 304
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
++ +C D +Y L + + G + EA +L N + +ED
Sbjct: 305 FCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLN-----NCVED-------- 351
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
G P A +I G C+ G + A ++ M
Sbjct: 352 ----------------------GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHP 389
Query: 255 PNLTIYNSFINGLCKMASTDV-AKNLVDELRKRKLLD-ATTFNTLISGYSNSGQIDEA 310
PN +Y I +C V A N + E+ + L+ + F+ + G N G+ D A
Sbjct: 390 PNRPVYTMLIT-MCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLA 446
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L++G G L+ A +++ KM T P+ ++N +I K G + E+
Sbjct: 257 LLIEGLLNAGYLESAKEMVSKM---TKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTA 313
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G + TY TLI ++ G ++E+ RL + VE G P +Y I+ + R+G
Sbjct: 314 CKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMF 373
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEA 171
++A SDM K P++ Y +L R G +A
Sbjct: 374 DDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDA 411
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 167/368 (45%), Gaps = 48/368 (13%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V+L C G + A+++ +M N VS+N+++ G + G + A++V M
Sbjct: 143 VMLTALCDDGRSEDAVELFDEMPER-------NVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 74 VKAGFEPS--VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG 131
PS V ++ +I GY +EE+ L +M E+ N+V + S++Y R+G
Sbjct: 196 ------PSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYG 245
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
D+ EA ++ +M +++I S+ + G N EAL L + +K D+ DA S N
Sbjct: 246 DVREAYRLFCEMPERNIV----SWTAMISGFAWNELYREALMLFLE-MKKDV--DAVSPN 298
Query: 192 ----ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA-TVIDGNCKLGNTEKALRLYN 246
I L Y C + L V + +D + +L + + +
Sbjct: 299 GETLISLAYACGGLGVEFRR------LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASS 352
Query: 247 GMIK-----MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGY 301
G+I ++E +L N IN K + A+ L + R + L D ++ ++I GY
Sbjct: 353 GLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFE--RVKSLHDKVSWTSMIDGY 410
Query: 302 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 361
+G + AFGL ++ + VT+ +I+ L +N EA L+ M+ G++P
Sbjct: 411 LEAGDVSRAFGLFQKLH----DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLN 466
Query: 362 ITYTTLIT 369
TY+ L++
Sbjct: 467 STYSVLLS 474
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 24/259 (9%)
Query: 60 KGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVV 119
+GGL+ A +L + + G V + +L+ YA+ G L+E+ L + M ER NIV
Sbjct: 55 EGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVT 110
Query: 120 YNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 179
N++L + M EA + +M + S+ ++ LC +G +A++L +++
Sbjct: 111 CNAMLTGYVKCRRMNEAWTLFREMPKNVV-----SWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 180 KFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTE 239
+ +++ S N L+ + ++ +M +R DV + +I G + E
Sbjct: 166 ERNVV----SWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGME 217
Query: 240 KALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLIS 299
+A L+ M + N+ + S + G C+ A L E+ +R ++ ++ +IS
Sbjct: 218 EAKLLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV---SWTAMIS 270
Query: 300 GYSNSGQIDEAFGLTTEMK 318
G++ + EA L EMK
Sbjct: 271 GFAWNELYREALMLFLEMK 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 143/345 (41%), Gaps = 25/345 (7%)
Query: 65 LAEEVLGDMVKAGFEP---SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYN 121
L E++ ++ G+E R +L+ YA G + + L +E + + N
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFD------LQSCN 372
Query: 122 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 181
I+ ++GD+E A + + H D+ S+ + +G G ++ A L ++
Sbjct: 373 IIINRYLKNGDLERAETLFERVKSLH---DKVSWTSMIDGYLEAGDVSRAFGLFQKLHD- 428
Query: 182 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 241
+D + ++++ + ++ M+ GL P T + ++ N ++
Sbjct: 429 ---KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 242 LRLYNGMIKMDE--QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLIS 299
++ + K P+L + NS ++ K + + A + ++ ++ D ++N++I
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK---DTVSWNSMIM 542
Query: 300 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI-MQGIR 358
G S+ G D+A L EM G N VT+ +++ +G EL K M I+
Sbjct: 543 GLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQ 602
Query: 359 PDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
P Y ++I + +E +++ PD Y A++
Sbjct: 603 PGIDHYISMIDLLGRAGKLKEA---EEFISALPFTPDHTVYGALL 644
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 148/351 (42%), Gaps = 29/351 (8%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++DG + G + A + +K++ G V++ +I+G + A +L DMV
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHDKDG-------VTWTVMISGLVQNELFAEAASLLSDMV 458
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRL-CDEMVERGLF-PNIVVYNSILYWLYRHGD 132
+ G +P TY+ L+ +L++ + C + P++++ NS++ + G
Sbjct: 459 RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGA 518
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+E+A ++ + M+ K D S+ + GL +G +AL L ++L ++ +
Sbjct: 519 IEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLG 574
Query: 193 LLNYICKSXXXXXXXXXXGSMI-TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
+L+ S +M T + P + ++ID + G ++A + +
Sbjct: 575 VLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISA---L 631
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFN-----TLISGYSNSGQ 306
P+ T+Y + + GLC + D + E +LL+ N L + Y+ G+
Sbjct: 632 PFTPDHTVYGALL-GLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGR 690
Query: 307 IDEAFGLTTEMKSLGL----SANRVTYNTLINLLCKNGCDEEAKELMKMMI 353
D + EM G+ + V N N+ D+ A E +M++
Sbjct: 691 HDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSG--DKSASEAAQMVL 739
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 173/386 (44%), Gaps = 24/386 (6%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G ++ ++A+ + M L + SV P ++Y S+ + + G ++ G ++
Sbjct: 95 IIRGFSRSSFPEMAISIFIDM-LCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 153
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G E T++ Y G L E+ R+ M+ G ++V +NS++ + G ++
Sbjct: 154 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMI--GF--DVVAWNSMIMGFAKCGLID 209
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A + +M + + S+ + G RNG +AL + ++ + D+ D F++ LL
Sbjct: 210 QAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
N ++ + +ID CK G E+ L ++ K
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK---- 321
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQI---DEA 310
L+ +NS I GL + A +L EL + L D+ +F +++ ++SG++ DE
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITH 370
F L E + S Y ++N+L G EEA+ L+K M + D + +++L++
Sbjct: 382 FRLMKEKYMIEPSIKH--YTLMVNVLGGAGLLEEAEALIKNM---PVEEDTVIWSSLLSA 436
Query: 371 FNKKHHPEEVIALHDYMILKGVIPDQ 396
K + E +A LK + PD+
Sbjct: 437 CRKIGNVE--MAKRAAKCLKKLDPDE 460
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 151/341 (44%), Gaps = 14/341 (4%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMV--KAGFEPSVRTYATLIDGYARWGSLEESLR 103
N +N+II GF + +A + DM+ +P TY ++ Y R G + +
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ 147
Query: 104 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 163
L +++ GL + + N++L+ G + EA ++ MI D ++ + G
Sbjct: 148 LHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF----DVVAWNSMIMGFA 203
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 223
+ G + +A L +++ + + S N +++ ++ M + + PD +
Sbjct: 204 KCGLIDQAQNLFDEMPQ----RNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
T ++++ LG +E+ ++ +++ + N + + I+ CK + N+ +
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 284 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
K++L + +N++I G +N+G + A L +E++ GL + V++ ++ +G
Sbjct: 320 PKKQL---SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 344 EAKELMKMMIMQ-GIRPDCITYTTLITHFNKKHHPEEVIAL 383
A E ++M + I P YT ++ EE AL
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEAL 417
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 21/300 (7%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G K G +D A + +M G VS+NS+I+GF + G A ++ +M
Sbjct: 198 MIMGFAKCGLIDQAQNLFDEMPQRNG-------VSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFP-NIVVYNSILYWLYRHGDM 133
+ +P T +L++ A G+ E+ R E + R F N +V +++ + G +
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQG-RWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EE V K + ++ IL GL NG+ A+ L +++ + L D+ S +
Sbjct: 310 EEGLNVFECAPKKQL--SCWNSMIL--GLANNGFEERAMDLFSELERSGLEPDSVSFIGV 365
Query: 194 LNYICKSXXXXXXXXXXGSMITRGL-PPDV--YTKATVIDGNCKLGNTEKALRLYNGMIK 250
L S M + + P + YT + G L +AL +
Sbjct: 366 LTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEAL-----IKN 420
Query: 251 MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEA 310
M + + I++S ++ K+ + ++AK L+K + + L + Y++ G +EA
Sbjct: 421 MPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEA 480
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 46 NSVSYNSIINGFCKK-GGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
++ S+N ++NG+C G AE V +M G + V +Y+++I Y++ GSL + L+L
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDM-IDKHICPDQYSYAILTEGLC 163
D M + + P+ VYN++++ L + + EA ++ M +K I P+ +Y L + LC
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 223
+ EA ++ ++ M+ +GL P +
Sbjct: 385 KARKTEEAKQVFDE-----------------------------------MLEKGLFPTIR 409
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
T + L E+ L M KM +P + Y I LC+ D L DE+
Sbjct: 410 TYHAFMR---ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEM 466
Query: 284 RKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 325
+++ + D +++ +I G +G+I+EA+G EMK G+ N
Sbjct: 467 KEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 151/345 (43%), Gaps = 22/345 (6%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G+ SVR Y ++I + + + L DEM R P++V ++L + ++ +
Sbjct: 154 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVH 211
Query: 135 EASKVLSDM-----IDKHICPDQYSYAILTEGLCRNGYLTEALKL---HNQILKFDLIED 186
+ K ++ + D + L LCR +++A L + FD
Sbjct: 212 DVGKAINTFHAYKRFKLEMGIDDFQS--LLSALCRYKNVSDAGHLIFCNKDKYPFD---- 265
Query: 187 AFSLNILLNYICKSXXXXXXXXXXG-SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
A S NI+LN C M G+ DV + +++I K G+ K L+L+
Sbjct: 266 AKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLF 325
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD--ATTFNTLISGYSN 303
+ M K +P+ +YN+ ++ L K + A+NL+ + + K ++ T+N+LI
Sbjct: 326 DRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCK 385
Query: 304 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
+ + +EA + EM GL TY+ + +L + G EE EL+ M G P T
Sbjct: 386 ARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVET 442
Query: 364 YTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLL 408
Y LI + + V+ L D M K V PD +Y ++ L
Sbjct: 443 YIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 487
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++ K + A +MK M G + PN V+YNS+I CK A++V +M
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKG--IEPNVVTYNSLIKPLCKARKTEEAKQVFDEM 399
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++ G P++RTY + R G EE L +M + G P + Y ++ L R D
Sbjct: 400 LEKGLFPTIRTYHAFMR-ILRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 456
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
+ + +M +K + PD SY ++ GL NG + EA + ++
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 10/249 (4%)
Query: 14 VLLDGACKT-GSLDLALKVMKKMNLMTGN-SVWPNSVSYNSIINGFCKKGGLLLAEEVLG 71
++L+G C GS A +V +M GN V + VSY+S+I+ + K G L ++
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEM----GNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFD 326
Query: 72 DMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM-VERGLFPNIVVYNSILYWLYRH 130
M K EP + Y ++ A+ + E+ L M E+G+ PN+V YNS++ L +
Sbjct: 327 RMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKA 386
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
EEA +V +M++K + P +Y L R G E +L ++ K +
Sbjct: 387 RKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG--EEVFELLAKMRKMGCEPTVETY 443
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
+L+ +C+ M + + PD+ + +I G G E+A Y M
Sbjct: 444 IMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKD 503
Query: 251 MDEQPNLTI 259
+PN +
Sbjct: 504 KGMRPNENV 512
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 126 WLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
W G EA +V +M + + D SY+ + + G L + LKL +++ K +
Sbjct: 276 WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEP 335
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMIT-RGLPPDVYTKATVIDGNCKLGNTEKALRL 244
D N +++ + K+ +M +G+ P+V T ++I CK TE+A ++
Sbjct: 336 DRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQV 395
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSN 303
++ M++ P + Y++F+ L + + L+ ++RK T+ LI
Sbjct: 396 FDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCR 452
Query: 304 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT 363
D L EMK + + +Y +I+ L NG EEA K M +G+RP+
Sbjct: 453 WRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENV 512
Query: 364 YTTLITHFNKKHHPEEVIALHDYMILKGVI 393
+ + F+ K + E+ I + KG I
Sbjct: 513 EDMIQSWFSGKQYAEQRITDSKGEVNKGAI 542
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 143/322 (44%), Gaps = 49/322 (15%)
Query: 20 CKTGSLDLALKVM-KKMNLMTGNSVWP--------NSVSYNSIINGFCKKGGLLLAEEVL 70
C T S + L+ + ++ ++ SV+ +S SYN +I+G+ K G + E+VL
Sbjct: 219 CSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVL 278
Query: 71 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
+MV++GF P +Y+ LI+G R G + +S+ + D + +G P+ VYN+++
Sbjct: 279 KEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISA 338
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI------ 184
D +E+ + M+D+ P+ +Y+ L GL + +++AL++ ++L ++
Sbjct: 339 RDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLV 398
Query: 185 -------------------------------EDAFSLNILLNYICKSXXXXXXXXXXGSM 213
E A+ L LL + + M
Sbjct: 399 TSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKL--LLKRLSRFGKCGMLLNVWDEM 456
Query: 214 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 273
G P DV ++DG C +G+ E A+ + ++ PN +Y+ + L T
Sbjct: 457 QESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKT 516
Query: 274 DVAKNLVDELRK-RKLLDATTF 294
++A L +++K R +A +F
Sbjct: 517 ELAYKLFLKIKKARATENARSF 538
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 101/222 (45%)
Query: 183 LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKAL 242
+ +D S +++L + + M+ G+ PD+ +D ++ +A+
Sbjct: 147 VTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAI 206
Query: 243 RLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYS 302
L+ + + +N+ + LC+ + AK++ + + D+ ++N +ISG+S
Sbjct: 207 ELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWS 266
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
G+++E + EM G + ++Y+ LI L + G ++ E+ + +G PD
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 363 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
Y +I +F +E + + M+ + P+ +TY +V+
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVS 368
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 6/265 (2%)
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
E G+ ++ Y+ IL L R VL M+ + + PD I + R Y+
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 229
A++L + F + S N LL +C+ + +P D + +I
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK-KGNIPFDSCSYNIMI 262
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKL 288
G KLG E+ ++ M++ P+ Y+ I GL + + + + D ++ K +
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNV 322
Query: 289 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
DA +N +I + ++ DE+ M N TY+ L++ L K +A E+
Sbjct: 323 PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 349 MKMMIMQGIRPDCITYTTLITHFNK 373
+ M+ +G+ P T L+T F K
Sbjct: 383 FEEMLSRGVLPT----TGLVTSFLK 403
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 137/362 (37%), Gaps = 49/362 (13%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
SY+ I+ ++ +VL MV G P + +D + R + ++ L +E
Sbjct: 153 SYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEES 212
Query: 109 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 168
G+ + +N++L L + A V + +I D SY I+ G + G +
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 169 TEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
E K +LK M+ G PD + + +
Sbjct: 272 EEMEK----VLK-------------------------------EMVESGFGPDCLSYSHL 296
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK-RK 287
I+G + G ++ +++ + P+ +YN+ I C S A++ + +R R+
Sbjct: 297 IEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMI---CNFIS---ARDFDESMRYYRR 350
Query: 288 LLDAT------TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
+LD T++ L+SG ++ +A + EM S G+ + + LC G
Sbjct: 351 MLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGP 410
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 401
A + + G R Y L+ ++ ++ + D M G D + Y+
Sbjct: 411 PHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEY 470
Query: 402 IV 403
IV
Sbjct: 471 IV 472
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 3/176 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G K + AL++ ++M V P + S + C G A +
Sbjct: 366 LVSGLIKGRKVSDALEIFEEM---LSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSR 422
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
KAG S Y L+ +R+G L + DEM E G ++ VY I+ L G +E
Sbjct: 423 KAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLE 482
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
A V+ + + K CP+++ Y+ L+ L + A KL +I K E+A S
Sbjct: 483 NAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 41/277 (14%)
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK- 146
L+ GY+ G E + +L DEM E + +N++L ++EA K ++ +K
Sbjct: 130 LLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 147 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 206
I PD +Y + + LCR G + + L + ++ K D S N LL
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLE----------- 236
Query: 207 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 266
+ Y + ++G+ R+++ M + PN+ YNS + G
Sbjct: 237 --------------EFYRRELFVEGD----------RIWDLMKSKNLSPNIRSYNSRVRG 272
Query: 267 LCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 325
L + A NL+D ++ + D T+N LI+ Y ++E EMK GL+ +
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGI--RPD 360
VTY LI LLCK G + A E+ + I + RP+
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN 369
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
LL + LD A+K K++ G + P+ V+YN++I C+KG + + ++
Sbjct: 162 ALLSAYVNSKKLDEAMKTFKELPEKLG--ITPDLVTYNTMIKALCRKGSMDDILSIFEEL 219
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K GFEP + ++ TL++ + R E R+ D M + L PNI YNS + L R+
Sbjct: 220 EKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKF 279
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A ++ M + I PD ++Y L + L E +K +N++ + L D + +L
Sbjct: 280 TDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCML 339
Query: 194 LNYICK 199
+ +CK
Sbjct: 340 IPLLCK 345
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 2/250 (0%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSIL 124
A ++ +M + E +V+++ L+ Y L+E+++ E+ E+ G+ P++V YN+++
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 125 YWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 184
L R G M++ + ++ PD S+ L E R E ++ + + +L
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 185 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 244
+ S N + + ++ M T G+ PDV+T +I N E+ ++
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT-FNTLISGYSN 303
YN M + P+ Y I LCK D A + +E K KLL + ++
Sbjct: 321 YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMG 380
Query: 304 SGQIDEAFGL 313
+G+IDEA L
Sbjct: 381 AGKIDEATQL 390
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
++ C+ GS+D L + +++ N P+ +S+N+++ F ++ + + + M
Sbjct: 198 TMIKALCRKGSMDDILSIFEELE---KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
P++R+Y + + G R ++L L D M G+ P++ YN+++ ++
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI 184
EE K ++M +K + PD +Y +L LC+ G L A+++ + +K L+
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
P+L YN+ I LC+ S D ++ +EL K D +FNTL+ + E +
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
MKS LS N +YN+ + L +N +A L+ +M +GI PD TY LIT +
Sbjct: 251 WDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRV 310
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTY 399
++ EEV+ ++ M KG+ PD TY
Sbjct: 311 DNNLEEVMKCYNEMKEKGLTPDTVTY 336
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%)
Query: 36 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 95
+LM ++ PN SYNS + G + A ++ M G P V TY LI Y
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 96 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 155
+LEE ++ +EM E+GL P+ V Y ++ L + GD++ A +V + I + Y
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
Query: 156 AILTEGLCRNGYLTEALKL 174
+ E L G + EA +L
Sbjct: 372 KPVVERLMGAGKIDEATQL 390
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 36/150 (24%)
Query: 293 TFNTLISGYSNSGQIDEAFGLTTEM-KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKM 351
+FN L+S Y NS ++DEA E+ + LG++ + VTYNT+I LC+ G ++ + +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 352 MIMQGIRPDCITYTTLITHFNKKH-----------------HPE---------------- 378
+ G PD I++ TL+ F ++ P
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 379 --EVIALHDYMILKGVIPDQKTYDAIVTPF 406
+ + L D M +G+ PD TY+A++T +
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAY 308
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 104/241 (43%), Gaps = 2/241 (0%)
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVY 223
+G A KL +++ + + S N LL+ S + + G+ PD+
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
T T+I C+ G+ + L ++ + K +P+L +N+ + + + D +
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 284 RKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
+ + L + ++N+ + G + + + +A L MK+ G+S + TYN LI +
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
EE + M +G+ PD +TY LI KK + + + + I ++ Y +
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPV 374
Query: 403 V 403
V
Sbjct: 375 V 375
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 146/348 (41%), Gaps = 47/348 (13%)
Query: 41 NSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEE 100
N +S + ++IN G L +++ K G + +TL+D Y++ GS E
Sbjct: 312 NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPME 371
Query: 101 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTE 160
+ +L E+ + ++ NS++ + G +++A +V + +K + S+ +T
Sbjct: 372 ACKLFSEVESY----DTILLNSMIKVYFSCGRIDDAKRVFERIENKSL----ISWNSMTN 423
Query: 161 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 220
G +NG E L+ +Q+ K DL D SL+ +++ GL
Sbjct: 424 GFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDS 483
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 280
D +++ID CK G E R+++ M+K DE P
Sbjct: 484 DQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVP------------------------- 518
Query: 281 DELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
+N++ISGY+ +GQ EA L +M G+ ++T+ ++ G
Sbjct: 519 -------------WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCG 565
Query: 341 CDEEAKELMK-MMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
EE ++L + M + G PD ++ ++ + + EE I L + M
Sbjct: 566 LVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM 613
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 133/302 (44%), Gaps = 30/302 (9%)
Query: 71 GDMVKAGFEPSVRTYAT-LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYR 129
G ++K GF S+ A L+ Y+R G + + L DEM +R F +N+++
Sbjct: 50 GLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFS----WNTMIEGYMN 105
Query: 130 HGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFS 189
G+ + + M ++ D YS+ ++ G + G L+ A +L N + + D++ +
Sbjct: 106 SGEKGTSLRFFDMMPER----DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVV----T 157
Query: 190 LNILLN-YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
LN LL+ YI D T TV+ +L + +++ +
Sbjct: 158 LNSLLHGYILNGYAEEALRLFK----ELNFSADAITLTTVLKACAELEALKCGKQIHAQI 213
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQID 308
+ + + + +S +N K +A +++++R+ D + + LISGY+N G+++
Sbjct: 214 LIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP---DDHSLSALISGYANCGRVN 270
Query: 309 EAFGLTTEMKSLGLSANR--VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTT 366
E+ GL +NR + +N++I+ N EA L M + R D T
Sbjct: 271 ESRGL------FDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAA 323
Query: 367 LI 368
+I
Sbjct: 324 VI 325
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D CK G ++ +V M V + V +NS+I+G+ G A ++ M
Sbjct: 491 LIDLYCKCGFVEHGRRVFDTM-------VKSDEVPWNSMISGYATNGQGFEAIDLFKKMS 543
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM-VERGLFPNIVVYNSILYWLYRHGDM 133
AG P+ T+ ++ G +EE +L + M V+ G P+ ++ ++ L R G +
Sbjct: 544 VAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYV 603
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 182
EEA ++ +M D ++ + G NGY K +I++ +
Sbjct: 604 EEAINLVEEM---PFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELE 649
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 44/319 (13%)
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
S+ +Y LI+ R L +V G+ + ++ + G + +A KV
Sbjct: 15 SIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVF 74
Query: 141 SDMIDKHICPDQYSYAILTEGLC-RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
+M + I S ++ G C RNGY E+L ++ K
Sbjct: 75 DEMPKRDI-----SGCVVMIGACARNGYYQESLDFFREMYK------------------- 110
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
GL D + +++ + L + E ++ ++K + + I
Sbjct: 111 ----------------DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
+S I+ K A+ + +L ++ D FN +ISGY+N+ Q DEA L +MK
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQ---DLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
LG+ + +T+N LI+ +E+ E++++M + G +PD +++T++I+ E+
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 380 VIALHDYMILKGVIPDQKT 398
M+ G+ P+ T
Sbjct: 272 AFDAFKQMLTHGLYPNSAT 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 118/302 (39%), Gaps = 42/302 (13%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
+S+I+ + K G + A +V D+ E + + +I GYA +E+L L +M
Sbjct: 156 SSLIDMYSKFGEVGNARKVFSDLG----EQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
G+ P+++ +N+++ + E+ S++L M PD S+ + GL N +
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 230
A Q+L L ++ ++ LL G + GL + ++ ++D
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLD 331
Query: 231 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD 290
K G +A+ L+ RK
Sbjct: 332 MYGKCGFISEAMILF--------------------------------------RKTPKKT 353
Query: 291 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMK 350
TFN++I Y+N G D+A L +M++ G + +T+ ++ G + + L
Sbjct: 354 TVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFL 413
Query: 351 MM 352
+M
Sbjct: 414 LM 415
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 130/324 (40%), Gaps = 44/324 (13%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
V +N++I+G+ A ++ DM G +P V T+ LI G++ + E+ + +
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILEL 243
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 167
M G P++V + SI+ L + E+A M+ + P+ + L Y
Sbjct: 244 MCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAY 303
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
+ ++H G + GL + ++
Sbjct: 304 MKHGKEIH-----------------------------------GYSVVTGLEDHGFVRSA 328
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR- 286
++D K G +A+ L+ K ++ +T +NS I D A L D++
Sbjct: 329 LLDMYGKCGFISEAMILFR---KTPKKTTVT-FNSMIFCYANHGLADKAVELFDQMEATG 384
Query: 287 KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT-YNTLINLLCKNGCDEEA 345
+ LD TF +++ S++G D L M++ R+ Y +++LL + G EA
Sbjct: 385 EKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEA 444
Query: 346 KELMKMMIMQGIRPDCITYTTLIT 369
E++K M M+ PD + L+
Sbjct: 445 YEMIKAMRME---PDLFVWGALLA 465
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 147/350 (42%), Gaps = 23/350 (6%)
Query: 32 MKKMNLMTGNSVWPNSVSYNSII--NG----FCKKGGLLLAEEVLGDMVKAGFEPSVRTY 85
MKK+ ++ + + SY +I NG FC+ G +L A +V +G R
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCR-GRVLHAH-----LVTSGIARLTRIA 54
Query: 86 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 145
A L+ Y G + ++ ++ DEM +R + +V+ + R+G +E+ +M
Sbjct: 55 AKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACA----RNGYYQESLDFFREMYK 110
Query: 146 KHICPDQYSYAILTEGLCRNGYLTEALKL-HNQILKFDLIEDAFSLNILLNYICKSXXXX 204
+ D + L + RN E K+ H +LKF DAF ++ L++ K
Sbjct: 111 DGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVG 169
Query: 205 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 264
+ + D+ +I G ++AL L M + +P++ +N+ I
Sbjct: 170 NARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALI 225
Query: 265 NGLCKMASTDVAKNLVDEL-RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 323
+G M + + +++ + D ++ ++ISG ++ Q ++AF +M + GL
Sbjct: 226 SGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLY 285
Query: 324 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
N T TL+ + KE+ ++ G+ + L+ + K
Sbjct: 286 PNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGK 335
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 147/362 (40%), Gaps = 43/362 (11%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY----ARWGSLEE 100
P++ Y+ +I+ KKG +A + +M +G P Y LI + + +LE+
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 101 SLRLCDEM--VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
D+M +ER PN+V YN +L + G +++ + + D+ + PD Y++ +
Sbjct: 191 VRGYLDKMKGIERCQ-PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
+ +NG + E + L + + CK
Sbjct: 250 MDAYGKNGMIKEMEAV---------------LTRMRSNECK------------------- 275
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
PD+ T +ID K EK + + +++ E+P L +NS I K D A+
Sbjct: 276 -PDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 279 LVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
+ ++ + + T+ +I Y G + A + E+ T N ++ + C
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYC 394
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
+NG EA +L + PD TY L + K E+V L M G++P+++
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Query: 398 TY 399
+
Sbjct: 455 FF 456
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 220 PD--VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
PD VY+K + G K G T A+ L++ M +P+ ++YN+ I + + D AK
Sbjct: 131 PDNGVYSKLISVMG--KKGQTRMAMWLFSEMKNSGCRPDASVYNALITA--HLHTRDKAK 186
Query: 278 NL------VDELR--KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 329
L +D+++ +R + T+N L+ ++ SG++D+ L ++ +S + T+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246
Query: 330 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 389
N +++ KNG +E + ++ M +PD IT+ LI + KK E++ ++
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306
Query: 390 KGVIPDQKTYDAIV 403
P T+++++
Sbjct: 307 SKEKPTLPTFNSMI 320
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LL ++G +D + K +++ + V P+ ++N +++ + K G + E VL M
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDM---SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+P + T+ LID Y + E+ + ++ P + +NS++ + +
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMI 329
Query: 134 EEASKVLSDMIDKHICPDQYSYA--ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
++A V M D + P +Y I+ G C G ++ A ++ ++ + D + A +LN
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLN 387
Query: 192 ILLNYICKS 200
+L C++
Sbjct: 388 AMLEVYCRN 396
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 221 DVYTKATVIDGNC-----KLGNTEKALRLYNGMIKMDEQ----PNLTIYNSFINGLCKMA 271
D Y K D +C +LG ++K L+ M +Q P+ +Y+ I+ + K
Sbjct: 89 DKYVKVVRCD-HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKG 147
Query: 272 STDVAKNLVDELRKRKLL-DATTFNTLISGY----SNSGQIDEAFGLTTEMKSLGL-SAN 325
T +A L E++ DA+ +N LI+ + + +++ G +MK + N
Sbjct: 148 QTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPN 207
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 385
VTYN L+ ++G ++ L K + M + PD T+ ++ + K +E+ A+
Sbjct: 208 VVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLT 267
Query: 386 YMILKGVIPDQKTYDAIVTPF 406
M PD T++ ++ +
Sbjct: 268 RMRSNECKPDIITFNVLIDSY 288
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 10/267 (3%)
Query: 82 VRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHG------DMEE 135
++ + +++ Y + ++++L +++ PN S L H +
Sbjct: 85 LKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ--PNFRPGRSTFLILLSHACRAPDSSISN 142
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
+VL+ M++ + PDQ + I LC G + EA L ++ + D ++ N LL
Sbjct: 143 VHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 196 YICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
++CK M + PD+ + +ID C N +A+ L + + +
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGL 313
P+ +YN+ + G C ++ A + ++++ + D T+NTLI G S +G+++EA
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNG 340
M G + TY +L+N +C+ G
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 103/242 (42%), Gaps = 6/242 (2%)
Query: 168 LTEALKLHNQILKF--DLIEDAFSLNILLNYICKSXXXXXXXXXX--GSMITRGLPPDVY 223
+ + +KL ILK + + ILL++ C++ M+ GL PD
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQV 160
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
T + C+ G ++A L + + P+ YN + LCK V VDE+
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 284 RKRKLL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
R + D +F LI NS + EA L +++ + G + YNT++ C
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDA 401
EA + K M +G+ PD ITY TLI +K EE M+ G PD TY +
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 402 IV 403
++
Sbjct: 341 LM 342
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 137/315 (43%), Gaps = 20/315 (6%)
Query: 70 LGDMVKAGFEPSVRT---YATLIDGYARWGSLEESLRLCDEMVERGLFP-NIVVYNSILY 125
L +A EPS+R L D + + S+ + R+ P ++ +NS+L
Sbjct: 44 LPQNTQAPREPSLRNPFKSPNLSDAKSLFNSIAATSRI----------PLDLKFHNSVLQ 93
Query: 126 WLYRHGDMEEASKVLSDMI--DKHICPDQYSYAILTEGLCR--NGYLTEALKLHNQILKF 181
+ + K+ ++ + P + ++ IL CR + ++ ++ N ++
Sbjct: 94 SYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNN 153
Query: 182 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 241
L D + +I + +C++ + + PPD YT ++ CK +
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 242 LRLYNGMIK-MDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLIS 299
+ M D +P+L + I+ +C + A LV +L D +NT++
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 300 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
G+ + EA G+ +MK G+ +++TYNTLI L K G EEA+ +K M+ G P
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP 333
Query: 360 DCITYTTLITHFNKK 374
D TYT+L+ +K
Sbjct: 334 DTATYTSLMNGMCRK 348
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 1/204 (0%)
Query: 67 EEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYW 126
VL MV G EP T + G ++E+ L E+ E+ P+ YN +L
Sbjct: 144 HRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKH 203
Query: 127 LYRHGDMEEASKVLSDMIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE 185
L + D+ + + +M D + PD S+ IL + +C + L EA+ L +++
Sbjct: 204 LCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D F N ++ C M G+ PD T T+I G K G E+A
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 246 NGMIKMDEQPNLTIYNSFINGLCK 269
M+ +P+ Y S +NG+C+
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCR 347
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL CK L + + + +M V P+ VS+ +I+ C L A ++ +
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMR--DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG 257
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
AGF+P Y T++ G+ E++ + +M E G+ P+ + YN++++ L + G +E
Sbjct: 258 NAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNG 166
EA L M+D PD +Y L G+CR G
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 151/348 (43%), Gaps = 15/348 (4%)
Query: 47 SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLR--L 104
+VS+ S IN + G L A + DM AG EP+ T+ L+ G + S E+L L
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 105 CDEMVERGLFPNIVVYNSILYWLY-RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 163
+ GL N V+ + + +Y + G ++A V M DK + ++ + +G
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK----NSVTWNTMIDGYM 151
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 223
R+G + A K+ +++ + DLI S ++N K M G+ PD
Sbjct: 152 RSGQVDNAAKMFDKMPERDLI----SWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
++ LG L ++ ++ D + N+ + NS I+ C+ + A+ + +
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 284 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
KR ++ ++N++I G++ +G E+ +M+ G + VT+ + G E
Sbjct: 268 EKRTVV---SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 344 EAKELMKMMIMQ-GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
E ++M I P Y L+ +++ E+ + L M +K
Sbjct: 325 EGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 22/313 (7%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNS--VSYNSIINGFCKKGGLLLAEEVLGD 72
++DG ++G +D A K+ KM P +S+ ++INGF KKG A +
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKM---------PERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M +G +P ++ G+L L + ++ + N+ V NS++ R G
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+E A +V +M + + S+ + G NG E+L ++ + DA +
Sbjct: 257 VEFARQVFYNMEKRTVV----SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTG 312
Query: 193 LLNYICKSXXXXXXXXXXGSMIT--RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
L C ++ + P + ++D + G E AL+L
Sbjct: 313 ALT-ACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQ---S 368
Query: 251 MDEQPNLTIYNSFINGLCKMASTDV-AKNLVDELRKRKLLDATTFNTLISGYSNSGQIDE 309
M +PN + S + + V A+ L+ L + + + L + Y+ G+ +
Sbjct: 369 MPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEG 428
Query: 310 AFGLTTEMKSLGL 322
A + +MK LGL
Sbjct: 429 ASKMRRKMKGLGL 441
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 11/274 (4%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVS-YNSIINGFCK-KGGLLLAEEVLGD 72
LL C+ G ++ A + M + ++P V +N I+NG+C + A+ + +
Sbjct: 230 LLCALCRHGHIEKAEEFM-----LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWRE 284
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M P+ +Y+ +I +++ G+L +SLRL DEM +RGL P I VYNS++Y L R
Sbjct: 285 MGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDC 344
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI 192
+EA K++ + ++ + PD +Y + LC G L A + ++ +L + +
Sbjct: 345 FDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHA 404
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L + G M L P T ++ K E AL+++ M + +
Sbjct: 405 FLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFE 460
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
N +Y + I GL + A+ + E++ +
Sbjct: 461 IVANPALYLATIQGLLSCGWLEKAREIYSEMKSK 494
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 233 CKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDV--AKNLVDELRKRKLL- 289
C+ G+ EKA K+ ++ +N +NG C + TDV AK + E+ +
Sbjct: 235 CRHGHIEKAEEFMLASKKLFP-VDVEGFNVILNGWCNIW-TDVTEAKRIWREMGNYCITP 292
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
+ +++ +IS +S G + ++ L EMK GL+ YN+L+ +L + C +EA +LM
Sbjct: 293 NKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLM 352
Query: 350 KMMIMQGIRPDCITYTTLI 368
K + +G++PD +TY ++I
Sbjct: 353 KKLNEEGLKPDSVTYNSMI 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 218 LPPDVYTKATVIDGNCKLG-NTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
P DV +++G C + + +A R++ M PN Y+ I+ K+ + +
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDS 313
Query: 277 KNLVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
L DE++KR L +N+L+ + DEA L ++ GL + VTYN++I
Sbjct: 314 LRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRP 373
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
LC+ G + A+ ++ MI + + P T+ + N E+ + + M + + P
Sbjct: 374 LCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLGPT 429
Query: 396 QKTY 399
++T+
Sbjct: 430 EETF 433
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
++D +T +A+R ++ M K P + + LC+ + A+ + +K
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLF 254
Query: 288 LLDATTFNTLISGYSN-SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
+D FN +++G+ N + EA + EM + ++ N+ +Y+ +I+ K G ++
Sbjct: 255 PVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSL 314
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 405
L M +G+ P Y +L+ ++ +E + L + +G+ PD TY++++ P
Sbjct: 315 RLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRP 373
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 134/324 (41%), Gaps = 46/324 (14%)
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
++D YA +++R D M + P + +L L RHG +E+A + + + K
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 148 ICP-DQYSYAILTEGLCRNGY--LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXX 204
+ P D + ++ G C N + +TEA ++ + + NY
Sbjct: 253 LFPVDVEGFNVILNGWC-NIWTDVTEAKRIWRE---------------MGNYC------- 289
Query: 205 XXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI 264
+ P+ + + +I K+GN +LRLY+ M K P + +YNS +
Sbjct: 290 -------------ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV 336
Query: 265 NGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS 323
L + D A L+ +L + L D+ T+N++I +G++D A + M S LS
Sbjct: 337 YVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLS 396
Query: 324 ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIAL 383
T++ + + E+ E++ M + + P T+ ++ K PE + +
Sbjct: 397 PTVDTFHAFLEAVNF----EKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKI 452
Query: 384 HDYMILKGVIPDQKTYDAIVTPFL 407
M ++ + Y A + L
Sbjct: 453 WAEMDRFEIVANPALYLATIQGLL 476
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 147/362 (40%), Gaps = 43/362 (11%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGY----ARWGSLEE 100
P++ Y+ +I+ KKG +A + +M +G P Y LI + + +LE+
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 101 SLRLCDEM--VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
D+M +ER PN+V YN +L + G +++ + + D+ + PD Y++ +
Sbjct: 191 VRGYLDKMKGIERCQ-PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 159 TEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGL 218
+ +NG + E + L + + CK
Sbjct: 250 MDAYGKNGMIKEMEAV---------------LTRMRSNECK------------------- 275
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKN 278
PD+ T +ID K EK + + +++ E+P L +NS I K D A+
Sbjct: 276 -PDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 279 LVDELRKRKLLDA-TTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
+ ++ + + T+ +I Y G + A + E+ T N ++ + C
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYC 394
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQK 397
+NG EA +L + PD TY L + K E+V L M G++P+++
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Query: 398 TY 399
+
Sbjct: 455 FF 456
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 220 PD--VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
PD VY+K + G K G T A+ L++ M +P+ ++YN+ I + + D AK
Sbjct: 131 PDNGVYSKLISVMG--KKGQTRMAMWLFSEMKNSGCRPDASVYNALITA--HLHTRDKAK 186
Query: 278 NL------VDELR--KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 329
L +D+++ +R + T+N L+ ++ SG++D+ L ++ +S + T+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246
Query: 330 NTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMIL 389
N +++ KNG +E + ++ M +PD IT+ LI + KK E++ ++
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306
Query: 390 KGVIPDQKTYDAIV 403
P T+++++
Sbjct: 307 SKEKPTLPTFNSMI 320
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LL ++G +D + K +++ + V P+ ++N +++ + K G + E VL M
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDM---SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+P + T+ LID Y + E+ + ++ P + +NS++ + +
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMI 329
Query: 134 EEASKVLSDMIDKHICPDQYSYA--ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
++A V M D + P +Y I+ G C G ++ A ++ ++ + D + A +LN
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLN 387
Query: 192 ILLNYICKS 200
+L C++
Sbjct: 388 AMLEVYCRN 396
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 157/369 (42%), Gaps = 41/369 (11%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G + G +AL+++K M ++ P+ ++ S++ + + +E+ G +
Sbjct: 207 IVAGYSQNGMARMALEMVKSM---CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
++GF+ V L+D YA+ GSLE + +L D M+ER N+V +NS++ ++ + +
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPK 319
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA + M+D+ + P S G L +H ++ L + +N L+
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 195 NYICKSXXXXXXXXXXG-------------------------------SMITRGLPPDVY 223
+ CK G M +R + PD +
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
T +VI +L T A ++ +++ N+ + + ++ K + +A+ + D +
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 284 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
+R + TT+N +I GY G A L EM+ + N VT+ ++I+ +G E
Sbjct: 500 SERHV---TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556
Query: 344 EAKELMKMM 352
+ MM
Sbjct: 557 AGLKCFYMM 565
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/394 (18%), Positives = 171/394 (43%), Gaps = 49/394 (12%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+L G K LD AL+ +M + V P ++ ++ + L + +E+ G +V
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRY---DDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K+GF + L + YA+ + E+ ++ D M ER ++V +N+I+ ++G
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMAR 218
Query: 135 EASKVLSDMIDKHICP----------------------DQYSYAI-------------LT 159
A +++ M ++++ P + + YA+ L
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
+ + G L A +L + +L+ +++ S N +++ ++ M+ G+
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVV----SWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
P + + LG+ E+ ++ +++ N+++ NS I+ CK D A ++
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 280 VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
+L+ R L+ ++N +I G++ +G+ +A ++M+S + + TY ++I + +
Sbjct: 395 FGKLQSRTLV---SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 340 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
AK + +++ + + T L+ + K
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 155/389 (39%), Gaps = 26/389 (6%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C+ GS+D A +V + ++ +V Y++++ GF K L A + M E
Sbjct: 80 CRYGSVDEAARVFEPIDSKL-------NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P V + L+ L + +V+ G ++ + + + EA KV
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
M ++ D S+ + G +NG AL++ + + +L ++ +L +
Sbjct: 193 FDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
G + G V ++D K G+ E A +L++GM+ + N+
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML----ERNVVS 304
Query: 260 YNSFINGLCKMASTDVA----KNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 315
+NS I+ + + A + ++DE K D + L ++ G ++ +
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDE--GVKPTDVSVMGAL-HACADLGDLERGRFIHK 361
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
LGL N N+LI++ CK + A + + + + +++ +I F +
Sbjct: 362 LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL----VSWNAMILGFAQNG 417
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAIVT 404
P + + M + V PD TY +++T
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 117/273 (42%), Gaps = 13/273 (4%)
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
L+ + R+GS++E+ R+ E ++ L V+Y+++L + D+++A + M
Sbjct: 75 LVSLFCRYGSVDEAARVF-EPIDSKLN---VLYHTMLKGFAKVSDLDKALQFFVRMRYDD 130
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
+ P Y++ L + L ++H ++K D F++ L N K
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
M R D+ + T++ G + G AL + M + + +P+ S + +
Sbjct: 191 KVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAV 246
Query: 268 CKMASTDVAKNLVDELRKRKLLDATTFNT-LISGYSNSGQIDEAFGLTTEMKSLGLSANR 326
+ V K + + +T L+ Y+ G ++ A L M L N
Sbjct: 247 SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM----LERNV 302
Query: 327 VTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
V++N++I+ +N +EA + + M+ +G++P
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 161/380 (42%), Gaps = 17/380 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V+L+G K G ++ A ++ ++ + VS+ ++I+G +K L A +M
Sbjct: 244 VMLNGYSKAGLIEQAEELFDQITE-------KDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++ G +PS L+ AR + L+L +V+RG + +I+++ D+
Sbjct: 297 LRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ A + + HI S L G +NG + +A ++ +Q +D FS N +
Sbjct: 357 KLALQQFEASVKDHIA----SRNALIAGFVKNGMVEQAREVFDQTHD----KDIFSWNAM 408
Query: 194 LNYICKSXXXXXXXXXXGSMITRG-LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
++ +S MI+ + PD T +V LG+ E+ R ++ +
Sbjct: 409 ISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFST 468
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG 312
PN + + I+ K S + A N+ + + + +N +I G + G A
Sbjct: 469 IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALD 528
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM-QGIRPDCITYTTLITHF 371
L ++++SL + N +T+ +++ C G E K + M GI PD Y ++
Sbjct: 529 LYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLL 588
Query: 372 NKKHHPEEVIALHDYMILKG 391
K EE + M +K
Sbjct: 589 GKAGRLEEAKEMIKKMPVKA 608
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 161/395 (40%), Gaps = 52/395 (13%)
Query: 9 CIKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 68
C+ L+ G + A+++ ++M + + N V+ ++I+ GG+
Sbjct: 138 CVSYTTLIKGYAQNNQWSEAMELFREMRNL---GIMLNEVTLATVISACSHLGGIWDCRM 194
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
+ +K E V L+ Y L+++ +L DEM ER N+V +N +L
Sbjct: 195 LQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER----NLVTWNVMLNGYS 250
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
+ G +E+A ++ + +K D S+ + +G R L EAL + ++L+ +
Sbjct: 251 KAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEV 306
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ LL+ +S G+++ RG + +AT+I + + AL+ +
Sbjct: 307 MMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEAS 366
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQID 308
+K ++ N+ I G K + A+ + D+ + D ++N +ISGY+ S
Sbjct: 367 VK----DHIASRNALIAGFVKNGMVEQAREVFDQTHDK---DIFSWNAMISGYAQSLSPQ 419
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
A L EM +S+++V +PD IT ++
Sbjct: 420 LALHLFREM----ISSSQV------------------------------KPDAITMVSVF 445
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ + EE HDY+ + P+ AI+
Sbjct: 446 SAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAII 480
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 166/381 (43%), Gaps = 46/381 (12%)
Query: 35 MNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR 94
M +M P+ ++ ++ G + + V G +++ GF+ V + +D Y +
Sbjct: 98 MRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGK 157
Query: 95 WGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 154
L + ++ EM ER N V + +++ + G++EEA + M ++++ S
Sbjct: 158 CKDLFSARKVFGEMPER----NAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG----S 209
Query: 155 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
+ L +GL ++G L A KL +++ K D+I S +++ K G M+
Sbjct: 210 WNALVDGLVKSGDLVNAKKLFDEMPKRDII----SYTSMIDGYAKG----------GDMV 255
Query: 215 T--------RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 266
+ RG+ DV + +I G + G +A ++++ M + +P+ I ++
Sbjct: 256 SARDLFEEARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSA 313
Query: 267 LCKMASTDVAKNLVDELRKR--KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 324
+M ++ + + L +R K LI + G +D A L EM L
Sbjct: 314 CSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDL-- 371
Query: 325 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALH 384
V+Y +++ + +GC EA L + M+ +GI PD + +T ++ + EE +
Sbjct: 372 --VSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYF 429
Query: 385 DYMILKGVIPDQKTYDAIVTP 405
+ M +K Y + +P
Sbjct: 430 ELM--------RKKYSILASP 442
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 160/425 (37%), Gaps = 75/425 (17%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
+SVS+ ++I G+ G A V+GDMVK G EP+ T ++ A +E ++
Sbjct: 110 DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVH 169
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP--------------- 150
+V+ GL N+ V NS+L + GD A V M+ + I
Sbjct: 170 SFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMD 229
Query: 151 ------------DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNILLNYI 197
D ++ + G + GY AL + +++L+ L+ D F+L +L+
Sbjct: 230 LAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
Query: 198 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 257
++T G +I + G E A RL I+ +L
Sbjct: 290 ANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL----IEQRGTKDL 345
Query: 258 TI--YNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTT 315
I + + ++G K+ + AKN+ L+ R D + +I GY G EA L
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDR---DVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 316 EMKSLGLSANRVTY-----------------------------------NTLINLLCKNG 340
M G N T N LI + K G
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 341 CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYD 400
A ++ + D +++T++I + H EE + L + M+++G+ PD TY
Sbjct: 463 NITSASRAFDLIRCE---RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYV 519
Query: 401 AIVTP 405
+ +
Sbjct: 520 GVFSA 524
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 128/312 (41%), Gaps = 51/312 (16%)
Query: 59 KKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIV 118
K G A+ V ++K+G SV L++ Y++ G + +L DEM R F
Sbjct: 26 KSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFS--- 82
Query: 119 VYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
+N++L + GDM+ + + + D S+ + G G +A+++
Sbjct: 83 -WNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIVGYKNIGQYHKAIRV---- 133
Query: 179 LKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNT 238
G M+ G+ P +T V+
Sbjct: 134 -------------------------------MGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 239 EKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLI 298
E ++++ ++K+ + N+++ NS +N K +AK + D + R D +++N +I
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR---DISSWNAMI 219
Query: 299 SGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG-I 357
+ + GQ+D A +M + VT+N++I+ + G D A ++ M+ +
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDI----VTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 358 RPDCITYTTLIT 369
PD T ++++
Sbjct: 276 SPDRFTLASVLS 287
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 149/344 (43%), Gaps = 16/344 (4%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
AL + KM + + + P+ + S+++ L + +++ +V GF+ S
Sbjct: 262 ALDIFSKM--LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
LI Y+R G +E + RL ++ + L I + ++L + GDM +A + + D+
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDL--KIEGFTALLDGYIKLGDMNQAKNIFVSLKDR- 376
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
D ++ + G ++G EA+ L ++ ++++L +L+
Sbjct: 377 ---DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
GS + G V +I K GN A R ++ +I+ + + + S I L
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD-LIRCER--DTVSWTSMIIAL 490
Query: 268 CKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG-LSAN 325
+ + A L + + L D T+ + S +++G +++ MK + +
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPT 550
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
Y +++L + G +EA+E ++ M I PD +T+ +L++
Sbjct: 551 LSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLS 591
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 119/289 (41%), Gaps = 44/289 (15%)
Query: 78 FEPSVRTYATLIDGYARWGSLEESLRLCDEMV---ERGLFPNIVVYNSILYWLYRHGDME 134
F P R Y TL+ GY + G + ++ R+ + M +R P+ V Y +++ G M+
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
A +VL++M + ++ +Y +L +G C+ + A L + + EDA
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLRE-----MTEDA------- 517
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
G+ PDV + +IDG + ++ AL +N M
Sbjct: 518 ----------------------GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIA 555
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDEL--RKRKLLDATTFNTLISGYSNSGQIDEAFG 312
P Y + + +A + DE+ R +D +N L+ GY G I++A
Sbjct: 556 PTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQR 615
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDC 361
+ + MK G N TY +L NG + K +++ + I+ C
Sbjct: 616 VVSRMKENGFYPNVATYGSL-----ANGVSQARKPGDALLLWKEIKERC 659
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 116/274 (42%), Gaps = 37/274 (13%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G K G + ++++ M + P+ V+Y ++++ F G + A +VL +M
Sbjct: 420 LMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMA 479
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE-RGLFPNIVVYNSILYWLYRHGDM 133
+ G + TY L+ GY + ++ + L EM E G+ P++V YN I+ D
Sbjct: 480 RMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDS 539
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNI 192
A ++M + I P + SY L + +G A ++ ++++ ++ D + N+
Sbjct: 540 AGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNM 599
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L ++G C+LG E A R+ + M +
Sbjct: 600 L-----------------------------------VEGYCRLGLIEDAQRVVSRMKENG 624
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
PN+ Y S NG+ + A L E+++R
Sbjct: 625 FYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKR----KLLDATTFNTLISGYSNSGQIDEA 310
P+ IY + + G K +++ +R++ D T+ T++S + N+G +D A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ-GIRPDCITYTTLIT 369
+ EM +G+ ANR+TYN L+ CK + A++L++ M GI PD ++Y +I
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 370 HFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPFLLA 409
+A + M +G+ P + +Y ++ F ++
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMS 571
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 104/247 (42%), Gaps = 6/247 (2%)
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD---LIEDAFSLNILLNYICK 199
++ K PD Y L +G +NG + + ++ + + D D + +++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK-MDEQPNLT 258
+ M G+P + T ++ G CK ++A L M + +P++
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRKRKLLDAT-TFNTLISGYSNSGQIDEAFGLTTEM 317
YN I+G + + A +E+R R + ++ TL+ ++ SGQ A + EM
Sbjct: 525 SYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 318 -KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
+ + + +N L+ C+ G E+A+ ++ M G P+ TY +L ++
Sbjct: 585 MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Query: 377 PEEVIAL 383
P + + L
Sbjct: 645 PGDALLL 651
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VLL G CK +D A ++++M G + P+ VSYN II+G A +M
Sbjct: 492 VLLKGYCKQLQIDRAEDLLREMTEDAG--IEPDVVSYNIIIDGCILIDDSAGALAFFNEM 549
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV-ERGLFPNIVVYNSILYWLYRHGD 132
G P+ +Y TL+ +A G + + R+ DEM+ + + +++ +N ++ R G
Sbjct: 550 RTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGL 609
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI 178
+E+A +V+S M + P+ +Y L G+ + +AL L +I
Sbjct: 610 IEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 164/394 (41%), Gaps = 45/394 (11%)
Query: 13 WVLLDGAC-KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 71
W L +C + G + AL++ K M + V P++V+ S++ G + G L +A V G
Sbjct: 170 WSTLVSSCLENGEVVKALRMFK---CMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHG 226
Query: 72 DMVKAGFE-------------------------------PSVRTYATLIDGYARWGSLEE 100
+ + F+ + ++ +I Y R E+
Sbjct: 227 QITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEK 286
Query: 101 SLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI-LT 159
+LR EM++ G+ PN+V S+L G + E V + + + P+ S ++ L
Sbjct: 287 ALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALV 346
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
E G L++ +L+ + + N L++ M+T+ +
Sbjct: 347 ELYAECGKLSDC----ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PD +T A+ I G +++ +I+ D + NS I+ K S D A +
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTV 461
Query: 280 VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
++++ R ++ T+N+++ G+S +G EA L M L N VT+ +I
Sbjct: 462 FNQIKHRSVV---TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSI 518
Query: 340 GCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
G E+ K + +I+ G++ D T T LI + K
Sbjct: 519 GSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAK 551
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 20/312 (6%)
Query: 63 LLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNS 122
L + +V G ++K G + +L+ Y + G+L ++ ++ D M R ++V +++
Sbjct: 117 LSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVR----DLVAWST 172
Query: 123 ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK-- 180
++ +G++ +A ++ M+D + PD + + EG G L A +H QI +
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM 232
Query: 181 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 240
FDL E L N + + + + + +I + +EK
Sbjct: 233 FDLDE------TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEK 286
Query: 241 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFN---TL 297
ALR ++ MIK +PNL S ++ C + V R+ LD + L
Sbjct: 287 ALRSFSEMIKSGIEPNLVTLYSVLSS-CGLIGLIREGKSVHGFAVRRELDPNYESLSLAL 345
Query: 298 ISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 357
+ Y+ G++ + T ++ + N V +N+LI+L G +A L + M+ Q I
Sbjct: 346 VELYAECGKLSDC---ETVLRVVS-DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 358 RPDCITYTTLIT 369
+PD T + I+
Sbjct: 402 KPDAFTLASSIS 413
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 131/308 (42%), Gaps = 11/308 (3%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N V++NS+I+ + +G ++ A + MV +P T A+ I G + ++
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
++ R + V NS++ + G ++ AS V + + + + ++ + G +N
Sbjct: 429 GHVI-RTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVV----TWNSMLCGFSQN 483
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G EA+ L + + L + + ++ +I GL D++T
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTD 542
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSF-INGLCKMASTDVAKNLVDELR 284
+ID K G+ A ++ M ++ N++ ++G ++ S N + E
Sbjct: 543 TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHG--RIGSAISTFNQMVESG 600
Query: 285 KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
+ + F ++S +SG ++E MKS G+S N + I+LL ++G +E
Sbjct: 601 TKP--NEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKE 658
Query: 345 AKELMKMM 352
A +K M
Sbjct: 659 AYRTIKEM 666
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 6/262 (2%)
Query: 21 KTGSLDLALKVMKKM-NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV-KAGF 78
K G + A KV ++M N SV +S+N++++ + + EE+ ++ K
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSV----LSFNALLSAYRLSKKFDVVEELFNELPGKLSI 176
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
+P + +Y TLI SL E++ L DE+ +GL P+IV +N++L Y G E +
Sbjct: 177 KPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEE 236
Query: 139 VLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYIC 198
+ + M++K++ D +Y GL E + L ++ L D FS N ++
Sbjct: 237 IWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSI 296
Query: 199 KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
++ G PD T A ++ CK G+ E A+ L+ T
Sbjct: 297 NEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQT 356
Query: 259 IYNSFINGLCKMASTDVAKNLV 280
++ L K + + A+ +V
Sbjct: 357 TLQQLVDELVKGSKREEAEEIV 378
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 130/336 (38%), Gaps = 12/336 (3%)
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V A P ++ +L++G + E + E ER NI VY+ + L +
Sbjct: 33 VTAAISPPQKSLTSLVNGERNPKRIVEKFKKACES-ER-FRTNIAVYDRTVRRLVAAKRL 90
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++L + + A + + G A K+ ++ D S N L
Sbjct: 91 HYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNAL 150
Query: 194 LNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L+ S + + + PD+ + T+I C+ + +A+ L + +
Sbjct: 151 LSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKG 210
Query: 253 EQPNLTIYN-----SFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQI 307
+P++ +N S++ G ++ AK + K +D T+N + G +N +
Sbjct: 211 LKPDIVTFNTLLLSSYLKGQFELGEEIWAKMV----EKNVAIDIRTYNARLLGLANEAKS 266
Query: 308 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
E L E+K+ GL + ++N +I G +EA+ K ++ G RPD T+ L
Sbjct: 267 KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326
Query: 368 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ K E I L K + Q T +V
Sbjct: 327 LPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLV 362
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 157/382 (41%), Gaps = 47/382 (12%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
+ I+ C + L A ++LG K P TY LI ++ +LEE ++ + +
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
G P IV++N +L + G + +A KV +M ++ +C S+ ++ G G L
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLC----SWNVMVNGYAEVGLLE 168
Query: 170 EALKLHNQILKFDLIEDAFSLNILLN-YICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
EA KL +++ + +D++S ++ Y+ K P+++T +
Sbjct: 169 EARKLFDEMTE----KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
+ + + ++ +++ + +++S ++ K D A+N+ D++ ++
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK-- 282
Query: 289 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
D ++ ++I Y S + E F L +E+ N T+ ++N +E K++
Sbjct: 283 -DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQV 341
Query: 349 MKMMIMQGI-------------------------------RPDCITYTTLITHFNKKHHP 377
M G +PD +++T+LI + P
Sbjct: 342 HGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQP 401
Query: 378 EEVIALHDYMILKGVIPDQKTY 399
+E + D ++ G PD T+
Sbjct: 402 DEALKYFDLLLKSGTKPDHVTF 423
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/396 (19%), Positives = 169/396 (42%), Gaps = 53/396 (13%)
Query: 14 VLLDGACKTGSLDLAL------KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAE 67
V+++ C+ A+ K++++ + G + P + +Y ++I + L +
Sbjct: 46 VVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGK 105
Query: 68 EVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWL 127
+V + +GF P + + L+ YA+ GSL ++ ++ DEM R ++ +N ++
Sbjct: 106 KVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR----DLCSWNVMVNGY 161
Query: 128 YRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF-DLIED 186
G +EEA K+ +M +K D YS+ + G + EAL L++ + + + +
Sbjct: 162 AEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPN 217
Query: 187 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYN 246
F+++I + G ++ GL D ++++D K G ++A +++
Sbjct: 218 IFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFD 277
Query: 247 GMIKMD-------------------------------EQPNLTIYNSFINGLCKMASTDV 275
+++ D E+PN + +N + + ++
Sbjct: 278 KIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEEL 337
Query: 276 AKNLVDELRKRKLLDATTF--NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI 333
K V R D +F ++L+ Y+ G I+ A + L V++ +LI
Sbjct: 338 GKQ-VHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL----VSWTSLI 392
Query: 334 NLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
+NG +EA + +++ G +PD +T+ +++
Sbjct: 393 GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLS 428
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 141/338 (41%), Gaps = 23/338 (6%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNS--VSYNSIINGFCKKGGLLLAEEVLGD 72
LL K GSL A KV +M PN S+N ++NG+ + G L A ++ +
Sbjct: 126 LLRMYAKCGSLVDARKVFDEM---------PNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE-RGLFPNIVVYNSILYWLYRHG 131
M E ++ ++ GY + EE+L L M PNI + +
Sbjct: 177 MT----EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
+ ++ ++ + D+ ++ L + + G + EA + ++I++ D++ S
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV----SWT 288
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
+++ KS ++ P+ YT A V++ L E +++ M ++
Sbjct: 289 SMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV 348
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAF 311
P +S ++ K + + AK++VD K L+ ++ +LI G + +GQ DEA
Sbjct: 349 GFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV---SWTSLIGGCAQNGQPDEAL 405
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
+ G + VT+ +++ G E+ E
Sbjct: 406 KYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 443
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/368 (17%), Positives = 143/368 (38%), Gaps = 75/368 (20%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
+ G+ PN ++ ++N L ++V G M + GF+P ++L+D Y + G+
Sbjct: 310 LVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGN 369
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+E + + D + P++V + S++ ++G +EA K ++ PD ++
Sbjct: 370 IESAKHVVDGCPK----PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVN 425
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ G + + L+ + + E + +Y C
Sbjct: 426 VLSACTHAGLVEKGLEFF-----YSITEKHRLSHTSDHYTC------------------- 461
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
++D + G E+ L + + +M +P+ ++ S + G + D+A+
Sbjct: 462 ----------LVDLLARSGRFEQ---LKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAE 508
Query: 278 NLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLS-------------- 323
EL K + + T+ T+ + Y+ +G+ +E + M+ +G++
Sbjct: 509 EAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKR 568
Query: 324 -------ANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
+ YN ++ L +EL K M +G P T+L+ H +
Sbjct: 569 HVFIAADTSHPMYNQIVEFL---------RELRKKMKEEGYVPA----TSLVLHDVEDEQ 615
Query: 377 PEEVIALH 384
EE + H
Sbjct: 616 KEENLVYH 623
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 47/335 (14%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D K S++ A +V K+ +++ P++ ++N +I+GFCK A ++ M
Sbjct: 245 LMDALVKENSIEHAHEVFLKL----FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMK 300
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
F P V TY + ++ Y + G + +EM E G PN+V Y +++ L + +
Sbjct: 301 VTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVA 360
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA V M + PD Y+ L L + G +A ++ ED
Sbjct: 361 EALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAA---------EIFED-------- 403
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
M +G+ DV T+I E ALRL M DE+
Sbjct: 404 ------------------MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM--EDEE 443
Query: 255 -----PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
PN+ Y + C + L+ + K + +D +T+ LI G SG+++
Sbjct: 444 GESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVE 503
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
EA E G+ T L++ L K E
Sbjct: 504 EACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAE 538
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%)
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
NS ++ L K S + A + +L DA TFN LI G+ + + D+A + MK
Sbjct: 243 NSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVT 302
Query: 321 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 380
+ + VTY + + CK G E+++ M G P+ +TYT ++ K E
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEA 362
Query: 381 IALHDYMILKGVIPDQKTYDAIV 403
+ +++ M G +PD K Y +++
Sbjct: 363 LGVYEKMKEDGCVPDAKFYSSLI 385
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 152/382 (39%), Gaps = 50/382 (13%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV---LGDMVKA 76
K+G + A+ +M G V ++++ NS+++ K+ + A EV L D +K
Sbjct: 214 AKSGKYNKAVDAFLEMEKSYG--VKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK- 270
Query: 77 GFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEA 136
P RT+ LI G+ + +++ + D M P++V Y S + + GD
Sbjct: 271 ---PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRV 327
Query: 137 SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNY 196
+++L +M + P+ +Y I+ L ++ + EAL ++ ++ + + DA + L++
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHI 387
Query: 197 ICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ-- 254
+ K+ M +G+ DV T+I E ALRL M DE+
Sbjct: 388 LSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM--EDEEGE 445
Query: 255 ---PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAF 311
PN+ Y + C + L+ + K N ID +
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVK-----------------NDVSIDVS- 487
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
TY LI LC +G EEA + + +G+ P T L+
Sbjct: 488 ----------------TYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDEL 531
Query: 372 NKKHHPEEVIALHDYMILKGVI 393
KK+ E + + + K +I
Sbjct: 532 EKKNMAEAKLKIQSLVQSKTMI 553
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 22/308 (7%)
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV--ERGLFPNIVVYNSILYWLYRHGD 132
+ G+ S TY ++D + + + L +EM E + + ++ L + G
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 218
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK------LHNQILK-FDLIE 185
+A +M + SY + T+ + N + +K H LK FD I+
Sbjct: 219 YNKAVDAFLEM--------EKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK 270
Query: 186 -DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 244
DA + NIL++ CK+ M PDV T + ++ CK G+ + +
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSN 303
M + PN+ Y ++ L K A + +++++ + DA +++LI S
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 304 SGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIM---QGIRPD 360
+G+ +A + +M + G+ + + YNT+I+ + DE A L+K M + P+
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 361 CITYTTLI 368
TY L+
Sbjct: 451 VETYAPLL 458
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 158/396 (39%), Gaps = 20/396 (5%)
Query: 27 LALKVMKKM----NLMTGNSVWPNSVS--------YNSIINGFCKKGGLLLAEEVLGDMV 74
L L+V+++ N G +W NS + YN++++ K L E++ +M
Sbjct: 134 LVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMN 193
Query: 75 KAGFEP--SVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSILYWLYRHG 131
K ++ T + ++ A+ G +++ EM + G+ + + NS++ L +
Sbjct: 194 KNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKEN 253
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
+E A +V + D I PD ++ IL G C+ +A + + + + D +
Sbjct: 254 SIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYT 312
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
+ CK M G P+V T V+ K +AL +Y M +
Sbjct: 313 SFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKED 372
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEA 310
P+ Y+S I+ L K A + +++ + + D +NT+IS + + + A
Sbjct: 373 GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMA 432
Query: 311 FGLTTEMKSL---GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
L M+ S N TY L+ + C + L+ M+ + D TY L
Sbjct: 433 LRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILL 492
Query: 368 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
I EE + + KG++P T +V
Sbjct: 493 IRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLV 528
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 10/196 (5%)
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKA----LRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
G+ D +++D K + E A L+L++ + +P+ +N I+G CK
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTI-----KPDARTFNILIHGFCKARK 288
Query: 273 TDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNT 331
D A+ ++D ++ + D T+ + + Y G + EM+ G + N VTY
Sbjct: 289 FDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTI 348
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
+++ L K+ EA + + M G PD Y++LI +K ++ + + M +G
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 392 VIPDQKTYDAIVTPFL 407
V D Y+ +++ L
Sbjct: 409 VRRDVLVYNTMISAAL 424
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 139/343 (40%), Gaps = 55/343 (16%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
Y S I+G C K E+ G+ + AG +L D YAR G L + R+ D+ +
Sbjct: 288 YGSQIHGLCIKS------ELAGNAI-AG--------CSLCDMYARCGFLNSARRVFDQ-I 331
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
ER P+ +N I+ L +G +EA V S M PD S L + L+
Sbjct: 332 ER---PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALS 388
Query: 170 EALKLHNQILK--------------------------FDLIED------AFSLNILLNYI 197
+ +++H+ I+K F+L ED + S N +L
Sbjct: 389 QGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC 448
Query: 198 CKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL 257
+ M+ PD T ++ G ++ + + +++ +K P
Sbjct: 449 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ 508
Query: 258 TIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM 317
I N I+ K S A+ + D + R D +++TLI GY+ SG +EA L EM
Sbjct: 509 FIKNGLIDMYAKCGSLGQARRIFDSMDNR---DVVSWSTLIVGYAQSGFGEEALILFKEM 565
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKEL-MKMMIMQGIRP 359
KS G+ N VT+ ++ G EE +L M GI P
Sbjct: 566 KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISP 608
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 139/318 (43%), Gaps = 16/318 (5%)
Query: 92 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 151
Y + GSL ++ + D M ER N+V Y S++ ++G EA ++ M+ + + PD
Sbjct: 112 YGKCGSLRDAREVFDFMPER----NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 211
Q+++ + + + + +LH Q++K + + N L+ +
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR-----FNQMSDA 222
Query: 212 SMITRGLP-PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCK 269
S + G+P D+ + +++I G +LG +AL M+ PN I+ S +
Sbjct: 223 SRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSS 282
Query: 270 MASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 328
+ D + K +L +A +L Y+ G ++ A + +++ + +
Sbjct: 283 LLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER----PDTAS 338
Query: 329 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMI 388
+N +I L NG +EA + M G PD I+ +L+ K + + +H Y+I
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 389 LKGVIPDQKTYDAIVTPF 406
G + D ++++T +
Sbjct: 399 KWGFLADLTVCNSLLTMY 416
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/362 (18%), Positives = 142/362 (39%), Gaps = 27/362 (7%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N VSY S+I G+ + G A + M++ P + ++I A + +L
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
++++ +++ N+++ R M +AS+V + K D S++ + G +
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK----DLISWSSIIAGFSQL 247
Query: 166 GYLTEALKLHNQILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G+ EAL ++L F + + + L G I L +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
++ D + G A R+++ + E+P+ +N I GL D A ++ ++R
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQI----ERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 285 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLI-------NLL 336
+ DA + +L+ + + + + + + G A+ N+L+ +L
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
C E+ + D +++ T++T + P E++ L M++ PD
Sbjct: 424 CCFNLFEDFRN----------NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 397 KT 398
T
Sbjct: 474 IT 475
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/290 (18%), Positives = 118/290 (40%), Gaps = 41/290 (14%)
Query: 29 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 88
+++++ LM + P+ ++ +++ G + L L +V +K G P L
Sbjct: 455 VEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGL 514
Query: 89 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 148
ID YA+ GSL ++ R+ D M R ++V +++++ + G EEA + +M I
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGI 570
Query: 149 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 208
P+ ++ + G + E LKL+ +
Sbjct: 571 EPNHVTFVGVLTACSHVGLVEEGLKLYATM------------------------------ 600
Query: 209 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 268
G+ P + V+D + G +A R + +M +P++ ++ + ++
Sbjct: 601 ----QTEHGISPTKEHCSCVVDLLARAGRLNEAERFID---EMKLEPDVVVWKTLLSACK 653
Query: 269 KMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMK 318
+ +A+ + + K ++T L S +++SG + A L + MK
Sbjct: 654 TQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMK 703
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 157/366 (42%), Gaps = 38/366 (10%)
Query: 35 MNLMTGNSVWP-NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYA 93
N + S++P ++ YN + L EE+ +MVK G E TY+T+I
Sbjct: 173 FNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAK 232
Query: 94 RWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 153
R +++ + M + GL P+ V Y++IL + G +EE + + PD
Sbjct: 233 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAI 292
Query: 154 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 213
++++L K+ + +D I Y+ + M
Sbjct: 293 AFSVLG-------------KMFGEAGDYDGI----------RYVLQ------------EM 317
Query: 214 ITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAST 273
+ + P+V T+++ + G A L+N M++ PN + + K
Sbjct: 318 KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWA 377
Query: 274 DVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMK-SLGLSANRVTYNT 331
A L +E++ +K +D +NTL++ ++ G +EA L +MK S+ + +Y
Sbjct: 378 RDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTA 437
Query: 332 LINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
++N+ G E+A EL + M+ G++ + + T L+ K ++V+ + D I +G
Sbjct: 438 MLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRG 497
Query: 392 VIPDQK 397
V PD +
Sbjct: 498 VKPDDR 503
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 140/335 (41%), Gaps = 38/335 (11%)
Query: 29 LKVMKKMNL-MTGNSVWPNSVSYNSIINGFCKKGGLLL--AEEVLGDMVKAGFEPSVRTY 85
+++++M L M + V ++++Y++II C K L A E M K G P TY
Sbjct: 202 FQLIEEMALEMVKDGVELDNITYSTIIT--CAKRCNLYNKAIEWFERMYKTGLMPDEVTY 259
Query: 86 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 145
+ ++D Y++ G +EE L L + V G P+ + ++ + GD + VL +M
Sbjct: 260 SAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS 319
Query: 146 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXX 205
+ P+ Y L E + R G A L N++L+ L + +L L+ K+
Sbjct: 320 MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARD 379
Query: 206 XXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFIN 265
M + P D T+++ +G E+A RL+N M + +
Sbjct: 380 ALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQ------------ 427
Query: 266 GLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSAN 325
C+ D ++ +++ Y + G+ ++A L EM G+ N
Sbjct: 428 --CRP-------------------DNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPD 360
+ L+ L K ++ + + I +G++PD
Sbjct: 467 VMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 57/114 (50%)
Query: 290 DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
D T++ ++ YS SG+++E L + G + + ++ L + + G + + ++
Sbjct: 255 DEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVL 314
Query: 350 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ M ++P+ + Y TL+ + P +L + M+ G+ P++KT A+V
Sbjct: 315 QEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV 368
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 150/336 (44%), Gaps = 17/336 (5%)
Query: 36 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 95
NL++ + + P+ ++N I + ++GFE TLI YA+
Sbjct: 71 NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKL 130
Query: 96 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 155
G+L + R+ DEM +R ++ V+N+++ R GDM+ A ++ M K++ S+
Sbjct: 131 GALCCARRVFDEMSKR----DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT----SW 182
Query: 156 AILTEGLCRNGYLTEALKLHNQILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMI 214
+ G +NG +EALK+ + K ++ + ++ +L G
Sbjct: 183 TTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAR 242
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
G ++Y I+ K G + A RL+ ++ Q NL +NS I L D
Sbjct: 243 ENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE---ELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 275 VAKNLVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL-GLSANRVTYNTL 332
A L + LR+ + DA TF L+ + G + + L M+ + +S Y +
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 333 INLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
I+LL + G +EA +L+K M M +PD + + TL+
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPM---KPDAVVWGTLL 392
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIK-MDEQPNLTIYNSFINGLCKMASTDVAKNL 279
+V + TVI G + GN +AL+++ M K +PN S + + ++ + L
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 280 VDELRKRKLLDATTF-NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
R+ D N I YS G ID A L E LG N ++N++I L
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEE---LGNQRNLCSWNSMIGSLAT 294
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKG 391
+G +EA L M+ +G +PD +T+ L+ + +H M++KG
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLL-----------LACVHGGMVVKG 336
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 11/252 (4%)
Query: 115 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCRNGYLTEALK 173
PN +NS++ YR G+ E ++ +M ++ C P+ YSY +L E C G ++EA K
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 174 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 233
+ ++ ++ D + N ++ +C + M +G+ T +++G C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 234 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK-------MASTDVAKNLVDELRKR 286
K G+ + L +Y M + + + + + GLC + + D+ K+ V E
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVRE--AM 420
Query: 287 KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
+ L+ G++D A + EM G ++ TY I+ G DEE
Sbjct: 421 FYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVG-DEETS 479
Query: 347 ELMKMMIMQGIR 358
L+ + + + ++
Sbjct: 480 ALLAIEMAESLK 491
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 114/246 (46%), Gaps = 9/246 (3%)
Query: 26 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK-AGFEPSVRT 84
D+++ KKM + PN+ ++NS++ F ++G + E + +M + G P+V +
Sbjct: 228 DVSVDEAKKMI----GKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 85 YATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMI 144
Y L++ Y G + E+ ++ +EM RG+ +IV YN+++ L + ++ +A ++ DM
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMG 343
Query: 145 DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK----S 200
K I +Y L G C+ G + L ++ ++ + D ++ L+ +C
Sbjct: 344 LKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQ 403
Query: 201 XXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIY 260
++ P ++ C+ G ++AL + M+ +P+ Y
Sbjct: 404 RVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETY 463
Query: 261 NSFING 266
+FI+G
Sbjct: 464 RAFIDG 469
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-------------QPNLTIYN 261
+RG+ + T +I + ++Y + +D+ +PN T +N
Sbjct: 190 SRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFN 249
Query: 262 SFINGLCKMASTDVAKNLVDELRKRK--LLDATTFNTLISGYSNSGQIDEAFGLTTEMKS 319
S + + T++ + + E+ + + ++N L+ Y G + EA + EMK
Sbjct: 250 SMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKV 309
Query: 320 LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
G+ + V YNT+I LC N +AKEL + M ++GI C+TY L+ + K +
Sbjct: 310 RGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDS 369
Query: 380 VIALHDYMILKGVIPDQKTYDAIV 403
+ ++ M KG D T +A+V
Sbjct: 370 GLVVYREMKRKGFEADGLTIEALV 393
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
G P+VY+ +++ C G +A +++ M ++ YN+ I GLC A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 277 KNLVDELRKRKLLDAT--TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
K L ++ K ++ T T+ L++GY +G +D + EMK G A+ +T L+
Sbjct: 336 KELFRDM-GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVE 394
Query: 335 LLCKNGCDE---EAKELMKMMIMQGI-RPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
LC + + EA +++K + + + P Y L+ + + + + M+ K
Sbjct: 395 GLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGK 454
Query: 391 GVIPDQKTYDAIV 403
G P Q+TY A +
Sbjct: 455 GFKPSQETYRAFI 467
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 76/187 (40%), Gaps = 42/187 (22%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL++ C G + A KV ++M + V + V+YN++I G C ++ A+E+ DM
Sbjct: 286 VLMEAYCARGLMSEAEKVWEEMKV---RGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGL-------------------- 113
G E + TY L++GY + G ++ L + EM +G
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 114 -------------------FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYS 154
+P+ Y ++ L G M+ A + ++M+ K P Q +
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462
Query: 155 YAILTEG 161
Y +G
Sbjct: 463 YRAFIDG 469
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 152/342 (44%), Gaps = 20/342 (5%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
Y S+I+ K L +++ ++ G + S LI + +G + + ++ D++
Sbjct: 24 YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
+FP +N+I+ R+ ++A + S+M + PD +++ L + +L
Sbjct: 81 RPQIFP----WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP-PD--VYTKA 226
+H Q+ + D F N L+ K + GLP P+ + +
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS-----ARTVFEGLPLPERTIVSWT 191
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
++ + G +AL +++ M KMD +P+ S +N + +++ + K
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 287 KL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
L ++ +L + Y+ GQ+ A L +MKS N + +N +I+ KNG EA
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREA 307
Query: 346 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
++ MI + +RPD I+ T+ I+ + E+ ++++Y+
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 147/370 (39%), Gaps = 49/370 (13%)
Query: 10 IKEWVLLDGA-CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 68
I W + A + G AL++ +M M V P+ V+ S++N F L
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKM---DVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
+ +VK G E +L YA+ G + + L D+M PN++++N+++
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYA 299
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
++G EA + +MI+K + PD S + G L +A ++ + + D +D F
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ L++ K + R L DV + +I G G +A+ LY M
Sbjct: 360 ISSALIDMFAKCGSVEGARL----VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 249 IKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQID 308
+ PN DV TF L+ ++SG +
Sbjct: 416 ERGGVHPN-----------------DV-----------------TFLGLLMACNHSGMVR 441
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
E + M ++ + Y +I+LL + G ++A E++K M +Q P + L+
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ---PGVTVWGALL 498
Query: 369 THFNKKHHPE 378
+ K H E
Sbjct: 499 SACKKHRHVE 508
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 136/335 (40%), Gaps = 46/335 (13%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
VS+ +I++ + + G + A E+ M K +P ++++ + L++ +
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 108 MVERGLF--PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+V+ GL P++++ + +Y + G + A K+L DK P+ + + G +N
Sbjct: 248 VVKMGLEIEPDLLISLNTMY--AKCGQVATA-KIL---FDKMKSPNLILWNAMISGYAKN 301
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
GY EA+ + ++ MI + + PD +
Sbjct: 302 GYAREAIDMFHE-----------------------------------MINKDVRPDTISI 326
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+ I ++G+ E+A +Y + + D + ++ I ++ I+ K S + A+ + D
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 286 RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
R D ++ +I GY G+ EA L M+ G+ N VT+ L+ +G E
Sbjct: 387 R---DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 346 KELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEV 380
M I P Y +I + H ++
Sbjct: 444 WWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQA 478
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 158/361 (43%), Gaps = 16/361 (4%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
+++S+ S+++G+ + A EV +MV G + + T ++ + + G +
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
++ G N + +++ Y + + +A +V +M + PD + + +N
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE----PDVICWTAVLSAFSKN 242
Query: 166 GYLTEALKLHNQILKFD-LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
EAL L + + L+ D + +L G +IT G+ +V
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+++++D K G+ +A +++NGM K N +++ + G C+ + A + E+
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMSK----KNSVSWSALLGGYCQNGEHEKAIEIFREME 358
Query: 285 KRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
++ D F T++ + + + + G N + + LI+L K+GC +
Sbjct: 359 EK---DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDS 415
Query: 345 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
A + M ++ + IT+ +++ + EE ++ + M+ KG+ PD ++ AI+T
Sbjct: 416 ASRVYSKMSIRNM----ITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILT 471
Query: 405 P 405
Sbjct: 472 A 472
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 140/313 (44%), Gaps = 49/313 (15%)
Query: 40 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 99
G + P+ ++ +++ L +E+ G ++ G +V ++L+D Y + GS+
Sbjct: 258 GKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVR 317
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
E+ ++ + M ++ N V ++++L ++G+ E+A ++ +M +K D Y + +
Sbjct: 318 EARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVL 369
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
+ C A++L +I G + RG
Sbjct: 370 KA-CAG---LAAVRLGKEI-------------------------------HGQYVRRGCF 394
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
+V ++ +ID K G + A R+Y+ M N+ +N+ ++ L + + A +
Sbjct: 395 GNVIVESALIDLYGKSGCIDSASRVYSKM----SIRNMITWNAMLSALAQNGRGEEAVSF 450
Query: 280 VDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEM-KSLGLSANRVTYNTLINLLC 337
+++ K+ + D +F +++ ++G +DE M KS G+ Y+ +I+LL
Sbjct: 451 FNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLG 510
Query: 338 KNGCDEEAKELMK 350
+ G EEA+ L++
Sbjct: 511 RAGLFEEAENLLE 523
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 149/349 (42%), Gaps = 15/349 (4%)
Query: 42 SVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEES 101
S+ ++ + S I CK G L A +L + + + YA+L+ + S
Sbjct: 21 SISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHG 80
Query: 102 LRLCDEMVERGLFPNIVVYNSILYWLYRHG-DMEEASKVLSDMIDKHICPDQYSYAILTE 160
++ +V+ GL + V NS+L ++ G M E +V D D S+ +
Sbjct: 81 IQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVF----DGRFVKDAISWTSMMS 136
Query: 161 GLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 220
G +AL++ +++ F L + F+L+ + + G +IT G
Sbjct: 137 GYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEW 196
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 280
+ + +T+ A R+++ M +P++ + + ++ K + A L
Sbjct: 197 NHFISSTLAYLYGVNREPVDARRVFDEM----PEPDVICWTAVLSAFSKNDLYEEALGLF 252
Query: 281 DELRKRKLL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
+ + K L D +TF T+++ N ++ + + ++ + G+ +N V ++L+++ K
Sbjct: 253 YAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGK 312
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYM 387
G EA+++ M + + ++++ L+ + + E+ I + M
Sbjct: 313 CGSVREARQVFNGM----SKKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 13/326 (3%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
PN + SI+ ++ L +V +VK + V +L+D YA+ G + + ++
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
D M R N V + SI+ R G EEA + M +H+ + + +
Sbjct: 342 FDGMSNR----NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
G L +LH QI+K + ++ + + L+ CK + +R DV +
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR----DVVS 453
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
+I G LG+ +AL MI+ +PN Y+S + S + +++ +
Sbjct: 454 WTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAK 513
Query: 285 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDE 343
K L + + LI Y+ G + EAF + M N V++ +I +NG
Sbjct: 514 KNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP----EKNLVSWKAMIMGYARNGFCR 569
Query: 344 EAKELMKMMIMQGIRPDCITYTTLIT 369
EA +LM M +G D + T+++
Sbjct: 570 EALKLMYRMEAEGFEVDDYIFATILS 595
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 168/389 (43%), Gaps = 22/389 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ + G L A KV M N+V++ ++I+G+ K G A + D V
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPE-------KNTVTWTAMIDGYLKYGLEDEAFALFEDYV 175
Query: 75 KAGFE-PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
K G + R + L++ +R E ++ MV+ G+ N++V +S++Y+ + G++
Sbjct: 176 KHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGEL 234
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
A + M +K D S+ + R G+ +A+ + +L + + F++ +
Sbjct: 235 TSALRAFDMMEEK----DVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSI 290
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
L + ++ R + DV+ +++D K G ++++GM
Sbjct: 291 LKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM----S 346
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFG 312
N + S I + + A +L +++R L+ + T +++ + G +
Sbjct: 347 NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKE 406
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFN 372
L ++ + N +TL+ L CK G +A +++ + + D +++T +I+ +
Sbjct: 407 LHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR----DVVSWTAMISGCS 462
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDA 401
H E + MI +GV P+ TY +
Sbjct: 463 SLGHESEALDFLKEMIQEGVEPNPFTYSS 491
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 151/324 (46%), Gaps = 13/324 (4%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
VSYN+II G+ + G A ++ +M +P T ++++ ++ + + + +
Sbjct: 208 VSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGY 267
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 167
++ +G+ ++ + +S++ + +E++ +V S + C D S+ L G +NG
Sbjct: 268 VIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL----YCRDGISWNSLVAGYVQNGR 323
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKAT 227
EAL+L Q++ + A + + ++ G ++ G +++ +
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 383
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
++D K GN + A ++++ M +DE + + I G A +L +E++++
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDE----VSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 288 LL-DATTFNTLISGYSNSGQIDEAFGLTTEM-KSLGLSANRVTYNTLINLLCKNGCDEEA 345
+ + F +++ S+ G +DEA+G M K GL+ Y + +LL + G EEA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 346 KELMKMMIMQGIRPDCITYTTLIT 369
+ M ++ P ++TL++
Sbjct: 500 YNFISKMCVE---PTGSVWSTLLS 520
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 159/374 (42%), Gaps = 24/374 (6%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYAR--- 94
M + P+ + S++ L E V G +V+ G + + T L++ YA+
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLG 155
Query: 95 WGSLEESLRLCDEMVERGLFP---NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 151
GS + DEM +R ++ I+ + ++ +V M K D
Sbjct: 156 MGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF-----GIDSVRRVFEVMPRK----D 206
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXG 211
SY + G ++G +AL++ ++ DL D+F+L+ +L + G
Sbjct: 207 VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHG 266
Query: 212 SMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMA 271
+I +G+ DVY ++++D K E + R+++ + D +NS + G +
Sbjct: 267 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG----ISWNSLVAGYVQNG 322
Query: 272 STDVAKNLVDELRKRKLLD-ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
+ A L ++ K+ A F+++I ++ + L + G +N +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 331 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
L+++ K G + A+++ M + D +++T +I H E ++L + M +
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVL----DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 391 GVIPDQKTYDAIVT 404
GV P+Q + A++T
Sbjct: 439 GVKPNQVAFVAVLT 452
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/311 (18%), Positives = 132/311 (42%), Gaps = 50/311 (16%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G + G + AL++ ++M V P +V+++S+I L L +++ G ++
Sbjct: 314 LVAGYVQNGRYNEALRLFRQM---VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI---VVYNSILYWLYRHG 131
+ GF ++ + L+D Y++ G+++ + ++ D M N+ V + +I+ HG
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM-------NVLDEVSWTAIIMGHALHG 423
Query: 132 DMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN 191
EA + +M + + P+Q ++ + G + EA N + K
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK----------- 472
Query: 192 ILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
GL ++ A V D + G E+A YN + KM
Sbjct: 473 -----------------------VYGLNQELEHYAAVADLLGRAGKLEEA---YNFISKM 506
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAF 311
+P +++++ ++ + ++A+ + +++ + + + + Y+++G+ E
Sbjct: 507 CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMA 566
Query: 312 GLTTEMKSLGL 322
L M+ GL
Sbjct: 567 KLRLRMRKKGL 577
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLY 245
D NI+++ +CK+ +++ GL PDV T +I + + +A +LY
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 246 NGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSG 305
MI+ P+ YNS I+GLCK +N + + RK +TFNTLI+GY +
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCK-------QNKLAQARKVSK-SCSTFNTLINGYCKAT 120
Query: 306 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 365
++ + L EM G+ AN +TY TLI+ + G A ++ + M+ G+ IT+
Sbjct: 121 RVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFR 180
Query: 366 TLITHFNKKHHPEEVIAL 383
++ + + +A+
Sbjct: 181 DILPQLCSRKELRKAVAM 198
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 54/221 (24%)
Query: 29 LKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATL 88
KVM++ N+ ++ YN II+G CK G A + +++ +G +P V+TY +
Sbjct: 2 FKVMRESNM------DMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMM 55
Query: 89 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 148
I R+ SL + +L EM+ RGL P+ + YNS+++
Sbjct: 56 I----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIH----------------------- 88
Query: 149 CPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXX 208
GLC+ L +A K+ F N L+N CK+
Sbjct: 89 ------------GLCKQNKLAQARKVSKSCSTF---------NTLINGYCKATRVKDGMN 127
Query: 209 XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI 249
M RG+ +V T T+I G ++G+ AL ++ M+
Sbjct: 128 LFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + P++++YNS+I+G CK+ L A +V S T+ TLI+GY +
Sbjct: 71 MIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATR 121
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+++ + L EM RG+ N++ Y ++++ + GD A + +M+ + ++
Sbjct: 122 VKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRD 181
Query: 158 LTEGLCRNGYLTEALKL 174
+ LC L +A+ +
Sbjct: 182 ILPQLCSRKELRKAVAM 198
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 228 VIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRK 287
+I G CK G ++A ++ ++ QP++ YN I + +S A+ L E+ +R
Sbjct: 20 IIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRG 75
Query: 288 LL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
L+ D T+N++I G ++ +A +S + T+NTLIN CK ++
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGM 126
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
L M +GI + ITYTTLI F + + + M+ GV T+ I+
Sbjct: 127 NLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 248 MIKMDEQPNLTI----YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYS 302
M K+ + N+ + YN I+GLCK D A N+ L L D T+N +I +S
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 303 NSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI 362
+ G+ ++ L EM GL + +TYN++I+ LCK +A+++ K C
Sbjct: 60 SLGRAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCS 107
Query: 363 TYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
T+ TLI + K ++ + L M +G++ + TY ++ F
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGF 151
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G CK L A KV K + ++N++ING+CK + + +M
Sbjct: 86 MIHGLCKQNKLAQARKVSKSCS------------TFNTLINGYCKATRVKDGMNLFCEMY 133
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G +V TY TLI G+ + G +L + EMV G++ + + + IL L ++
Sbjct: 134 RRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELR 193
Query: 135 EASKVL---SDMIDKHI 148
+A +L S M+ ++
Sbjct: 194 KAVAMLLQKSSMVSNNV 210
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 31/371 (8%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
++VS+NS+I+G+ + G A ++ M + GFEP RT +++ + G L RL
Sbjct: 197 DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLL 255
Query: 106 DEMVERGLFPNIVVYNSILYWLY-RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
+EM S L +Y + GD++ A +V + MI K D+ ++ + +
Sbjct: 256 EEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQ 311
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVY 223
NG +EA KL ++ K + DA +L+ +L+ C S + + L ++Y
Sbjct: 312 NGKSSEAFKLFFEMEKTGVSPDAGTLSTVLS-ACGSVGALELGKQIETHASELSLQHNIY 370
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
++D K G E+ALR++ M +E +N+ I A L D
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMPVKNE----ATWNAMITAYAHQGHAKEALLLFD-- 424
Query: 284 RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL-GLSANRVTYNTLINLLCKNGCD 342
R TF ++S ++G + + EM S+ GL Y +I+LL + G
Sbjct: 425 RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGML 484
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKH-------------HPEEVIALHDYMIL 389
+EA E M+ +PD I ++ +K+ +E +Y+I
Sbjct: 485 DEAWEFMERFPG---KPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVIS 541
Query: 390 KGVIPDQKTYD 400
V+ D K +D
Sbjct: 542 SNVLADMKMWD 552
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 154/386 (39%), Gaps = 66/386 (17%)
Query: 26 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 85
+ AL + ++M + + P+ +YN + K + + V + K G E V
Sbjct: 114 EAALSLYRRMKF---SGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHIN 170
Query: 86 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 145
+LI YA+ G + + +L DE+ ER + V +NS++ G ++A + M +
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEE 226
Query: 146 KHICPDQYSYAILTEGLC------RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
+ PD+ + + G C R G L E + + +I
Sbjct: 227 EGFEPDERTLVSML-GACSHLGDLRTGRLLEEMAITKKI--------------------- 264
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
GL + +K + G C G+ + A R++N MIK D
Sbjct: 265 -----------------GLSTFLGSKLISMYGKC--GDLDSARRVFNQMIKKDR----VA 301
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 318
+ + I + + A L E+ K + DA T +T++S + G ++ + T
Sbjct: 302 WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHAS 361
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE 378
L L N L+++ K G EEA + + M ++ + T+ +IT + + H +
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAK 417
Query: 379 EVIALHDYMILKGVIPDQKTYDAIVT 404
E + L D M V P T+ +++
Sbjct: 418 EALLLFDRM---SVPPSDITFIGVLS 440
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 239 EKALRLYNGMIKM-DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNT 296
++A R+Y M KM +P+L YN I C+ S + ++V E+ ++ + ++++F
Sbjct: 168 KEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227
Query: 297 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
+ISG+ + DE + MK G++ TYN I LCK +EAK L+ M+ G
Sbjct: 228 MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG 287
Query: 357 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
++P+ +TY+ LI F + EE L M+ +G PD + Y ++
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLI 334
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 37/259 (14%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
A +V +M M G + P+ +YN +I FC+ G + ++ +M + G +P+ ++
Sbjct: 170 AKRVYIEMPKMYG--IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
+I G+ +E ++ M +RG+ + YN + L + +EA +L M+
Sbjct: 228 MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG 287
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
+ P+ +Y+ L G C EA KL F +
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKL-------------FKI----------------- 317
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
M+ RG PD T+I CK G+ E AL L ++ + P+ +I S +NGL
Sbjct: 318 -----MVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 372
Query: 268 CKMASTDVAKNLVDELRKR 286
K + + AK L+ +++++
Sbjct: 373 AKDSKVEEAKELIGQVKEK 391
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 26 DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTY 85
D + +V K + +M V +YN I CK+ A+ +L M+ AG +P+ TY
Sbjct: 236 DKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTY 295
Query: 86 ATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID 145
+ LI G+ EE+ +L MV RG P+ Y +++Y+L + GD E A + + ++
Sbjct: 296 SHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESME 355
Query: 146 KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
K+ P L GL ++ + EA +L Q +++ F+ N+ L
Sbjct: 356 KNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQ------VKEKFTRNVEL 398
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 4/230 (1%)
Query: 168 LTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR--GLPPDVYTK 225
L +L++ + KF++ SLN LL + C + + G+ PD+ T
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALL-FACLVAKDYKEAKRVYIEMPKMYGIEPDLETY 190
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+I C+ G+ + + M + +PN + + I+G +D ++ ++
Sbjct: 191 NRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKD 250
Query: 286 RKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEE 344
R + + +T+N I + EA L M S G+ N VTY+ LI+ C EE
Sbjct: 251 RGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEE 310
Query: 345 AKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
AK+L K+M+ +G +PD Y TLI + K E ++L + K +P
Sbjct: 311 AKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 2/271 (0%)
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVL 140
S R A I YA+ L+ SLR+ ++ + + + N++L+ D +EA +V
Sbjct: 115 SERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVY 174
Query: 141 SDMIDKH-ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
+M + I PD +Y + + C +G + + + ++ + + ++ S ++++
Sbjct: 175 IEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYA 234
Query: 200 SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTI 259
M RG+ V T I CK +++A L +GM+ +PN
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 318
Y+ I+G C + AK L + R D+ + TLI G + A L E
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
+ +L+N L K+ EEAKEL+
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 152/345 (44%), Gaps = 18/345 (5%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
A + K+MNL + + S + GL ++V VK G + + T ++
Sbjct: 513 AFDLFKRMNLC---GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
LID Y++ G ++++ ++ + E ++V N+++ Y ++EEA + +M+ +
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEW----SVVSMNALIAG-YSQNNLEEAVVLFQEMLTRG 624
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNI-LLNYICKSXXXXXX 206
+ P + ++A + E + LT + H QI K + L I LL S
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEA 684
Query: 207 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 266
+ + P + ++ G+ + G E+AL+ Y M P+ + + +
Sbjct: 685 CALFSELSS---PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR- 740
Query: 267 LCKMASTDVAKNLVDEL--RKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSA 324
+C + S+ + L LD T NTLI Y+ G + + + EM+ +
Sbjct: 741 VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR---RS 797
Query: 325 NRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
N V++N+LIN KNG E+A ++ M I PD IT+ ++T
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLT 842
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/401 (18%), Positives = 167/401 (41%), Gaps = 50/401 (12%)
Query: 30 KVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLI 89
KV++ + N ++PN +++ +++ ++ + ++ M+K G E + L+
Sbjct: 143 KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALV 202
Query: 90 DGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC 149
D YA+ + ++ R+ + +V+ PN V + + + G EEA V M D+
Sbjct: 203 DMYAKCDRISDARRVFEWIVD----PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 150 PDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 209
PD ++ + R G L +A L ++ D++ + N++++ K
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVV----AWNVMISGHGKRGCETVAIEY 314
Query: 210 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
+M + T +V+ + N + L ++ IK+ N+ + +S ++ K
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 270 MASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTY 329
+ A + + L ++ + +N +I GY+++G+ + L +MKS G + + T+
Sbjct: 375 CEKMEAAAKVFEALEEK---NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 330 -----------------------------------NTLINLLCKNGCDEEAKELMKMMIM 354
N L+++ K G E+A+++ + M
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 355 QGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
+ D +T+ T+I + + + E L M L G++ D
Sbjct: 492 R----DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 162/387 (41%), Gaps = 46/387 (11%)
Query: 27 LALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYA 86
+ L +K L+ G P+ V++N +I+G K+G +A E +M K+ + + T
Sbjct: 272 IRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 87 TLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDK 146
+++ +L+ L + E ++ GL NI V +S++ + ME A+KV + +K
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Query: 147 HICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXX 206
+ D + A++ G NG + ++L + D F+ LL+ S
Sbjct: 392 N---DVFWNAMI-RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 207 XXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFI-- 264
+I + L +++ ++D K G E A +++ M D TI S++
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 265 --------------------NGLCKMASTDVAKNLVDELRKRKLL-----------DATT 293
+G C +AST A V L + K + D T
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGAC-LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHT 566
Query: 294 FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI 353
++LI YS G I +A + + + + V+ N LI +N EEA L + M+
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLPEWSV----VSMNALIAGYSQNNL-EEAVVLFQEML 621
Query: 354 MQGIRPDCITYTTLITHFNKKHHPEEV 380
+G+ P IT+ T++ H PE +
Sbjct: 622 TRGVNPSEITFATIV---EACHKPESL 645
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G + G + ALK K+M + V P+ ++ +++ L + +
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMR---HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIF 759
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ T TLID YA+ G ++ S ++ DEM R N+V +NS++ ++G E
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR---SNVVSWNSLINGYAKNGYAE 816
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL 179
+A K+ M HI PD+ ++ + G +++ K+ ++
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI 861
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 157/396 (39%), Gaps = 74/396 (18%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
+Y +I F + L ++ +V +P + LI Y R ++L + DE+
Sbjct: 24 AYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEI 83
Query: 109 VERGLFPN---IVVYNS----------ILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 155
R F ++ Y S L W+ +A++ PD S
Sbjct: 84 TVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAAR-----------PDSISI 132
Query: 156 AILTEGL--CRNGYLTE-ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGS 212
+ + + L C + +L A ++H +++ D F N ++ Y K
Sbjct: 133 SCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDE 192
Query: 213 MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI----------------------- 249
M R DV + ++I G + G+ E ++Y M+
Sbjct: 193 MSER----DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSS 248
Query: 250 ----------KMDE---QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNT 296
KM E Q +L++ N+ I K S D A+ L DE+ ++ D+ T+
Sbjct: 249 DLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK---DSVTYGA 305
Query: 297 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
+ISGY G + EA L +EM+S+GLS T+N +I+ L +N EE + MI G
Sbjct: 306 IISGYMAHGLVKEAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 357 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV 392
RP+ +T ++L+ + + +H + I G
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGA 397
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 147/345 (42%), Gaps = 16/345 (4%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
++ G ++GS + K+ K M + + PN V+ S+ + L+ EV M+
Sbjct: 204 MISGYSQSGSFEDCKKMYKAM--LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMI 261
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ + + +I YA+ GSL+ + L DEM E+ + V Y +I+ HG ++
Sbjct: 262 ENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK----DSVTYGAIISGYMAHGLVK 317
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
EA + S+M + ++ + GL +N + E + ++++ + +L+ LL
Sbjct: 318 EAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLL 373
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ 254
+ S I G ++Y ++ID KLG A R+++ +
Sbjct: 374 PSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNC----KD 429
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELR-KRKLLDATTFNTLISGYSNSGQIDEAFGL 313
+L + + I +D A +L D+++ D T ++S +++SG D A +
Sbjct: 430 RSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHI 489
Query: 314 TTEM-KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI 357
M + Y ++++L + G +A E + M + I
Sbjct: 490 FDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPI 534
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 159/387 (41%), Gaps = 49/387 (12%)
Query: 39 TGNSVWPNSVSYNSIINGF--CKKGGL-LLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 95
+ ++ P+S+S + ++ C L LA +V G +++ GF+ V +I Y +
Sbjct: 121 SSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKC 180
Query: 96 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMID-KHICPDQYS 154
++E + ++ DEM ER ++V +NS++ + G E+ K+ M+ P+ +
Sbjct: 181 DNIESARKVFDEMSER----DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT 236
Query: 155 YAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
+ + ++ L L++H ++++ + D N ++ + K M
Sbjct: 237 VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
+ D T +I G G ++A+ L++ M E L+ +N+ I+GL +
Sbjct: 297 EK----DSVTYGAIISGYMAHGLVKEAMALFSEM----ESIGLSTWNAMISGLMQ----- 343
Query: 275 VAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
N +E+ +F +I G L++ + SL S+N +
Sbjct: 344 --NNHHEEV-------INSFREMI----RCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 335 LLCKNGCD----------EEAKELMKMMIMQGIRPDC-----ITYTTLITHFNKKHHPEE 379
+NG D + +L ++ Q + +C I +T +IT + +
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDS 450
Query: 380 VIALHDYMILKGVIPDQKTYDAIVTPF 406
+L D M G PD T A+++ F
Sbjct: 451 ACSLFDQMQCLGTKPDDVTLTAVLSAF 477
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 149/369 (40%), Gaps = 51/369 (13%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
K GSLD A + +M+ +SV+Y +II+G+ G + A + +M G
Sbjct: 281 KCGSLDYARALFDEMSE-------KDSVTYGAIISGYMAHGLVKEAMALFSEMESIG--- 330
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK-- 138
+ T+ +I G + EE + EM+ G PN V +S+L L +++ +
Sbjct: 331 -LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 139 -------------VLSDMIDKHI--------------CPDQ--YSYAILTEGLCRNGYLT 169
V + +ID + C D+ ++ + +G
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATV 228
A L +Q+ D +L +L+ S SM+T+ + P V A +
Sbjct: 450 SACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL 288
+ + G A+ + KM P ++ + +NG + ++A+ D L + +
Sbjct: 510 VSVLSRAGKLSDAMEFIS---KMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP 566
Query: 289 LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL-----SANRVTYNTLINLLCKNGCDE 343
+ + + + Y+ +G+ +EA + +MK +GL ++ T L + + K+ E
Sbjct: 567 ENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCE 626
Query: 344 EAKELMKMM 352
+KE+ +++
Sbjct: 627 RSKEMYEII 635
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 168/388 (43%), Gaps = 23/388 (5%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C+ SL+ A K+ +M+ + N+VS ++I+ + ++G L A + M+ +G +
Sbjct: 129 CECRSLEDADKLFDEMSEL-------NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
P Y TL+ +L+ ++ ++ GL N + I+ + G + A +V
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICK 199
M K + L G + G +ALKL ++ + D+F +++L C
Sbjct: 242 FDQMAVK----KPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLK-ACA 296
Query: 200 SXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLT 258
S + + + GL +V ++D K + E A R + + +PN
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI----REPNDV 352
Query: 259 IYNSFINGLCKMASTDVAKNLVDELRKR--KLLDATTFNTLISGYSNSGQIDEAFGLTTE 316
+++ I+G C+M+ + A LR + +L++ T+ ++ S + + +
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 317 MKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHH 376
L ++ + LI + K GC ++A E+ + M PD + +T I+ +
Sbjct: 413 AIKRSLIGSQYGESALITMYSKCGCLDDANEVFESM----DNPDIVAWTAFISGHAYYGN 468
Query: 377 PEEVIALHDYMILKGVIPDQKTYDAIVT 404
E + L + M+ G+ P+ T+ A++T
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLT 496
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 133/323 (41%), Gaps = 17/323 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+ G + G ALK+ ++L+T W +S ++ ++ L L +++ +
Sbjct: 256 LMVGYTQAGRARDALKLF--VDLVTEGVEW-DSFVFSVVLKACASLEELNLGKQIHACVA 312
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K G E V L+D Y + S E + R E+ E PN V +++I+ + E
Sbjct: 313 KLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE----PNDVSWSAIISGYCQMSQFE 368
Query: 135 EASKVLSDMIDKHICP-DQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EA K + K+ + ++Y + + ++H +K LI + + L
Sbjct: 369 EAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESAL 428
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ K SM PD+ I G+ GN +ALRL+ M+
Sbjct: 429 ITMYSKCGCLDDANEVFESMDN----PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 484
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATT--FNTLISGYSNSGQIDEAF 311
+PN + + + + K+ +D + ++ + T ++ +I Y+ SG +DEA
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544
Query: 312 GLTTEMKSLGLSANRVTYNTLIN 334
MK++ + +++ ++
Sbjct: 545 KF---MKNMPFEPDAMSWKCFLS 564
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 142/333 (42%), Gaps = 47/333 (14%)
Query: 20 CKTGSL-DLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF 78
C +L D AL V++K +V ++V+YN +I F KG L +A+ ++ +M G
Sbjct: 140 CNQANLADEALWVLRKFPEF---NVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGL 196
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
P V TY ++I+GY G ++++ RL EM + N V Y+ IL + + GDME A +
Sbjct: 197 YPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALE 256
Query: 139 VLSDMIDKH----ICPDQYSYAILTEGLCRNGYLTEALK----------LHNQILKFDLI 184
+L++M + I P+ +Y ++ + C + EAL + N++ LI
Sbjct: 257 LLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
Query: 185 -------EDAFSLNILLNYICKSXXXXXXXXXXGS-------------------MITRGL 218
ED +L+ L++ + K + M+ RG+
Sbjct: 317 QGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGV 376
Query: 219 PPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNL--TIYNSFINGLCKMASTDVA 276
PD + V C L LY + K D + + I+ + GLC+ ++ A
Sbjct: 377 RPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEA 436
Query: 277 KNLVDELRKRKL-LDATTFNTLISGYSNSGQID 308
L + +K+ L + +I +G D
Sbjct: 437 AKLAKSMLDKKMRLKVSHVEKIIEALKKTGDED 469
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 17/246 (6%)
Query: 162 LCRNGYLT-EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP 220
LC L EAL + + +F++ D + N+++ M GL P
Sbjct: 139 LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYP 198
Query: 221 DVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLV 280
DV T ++I+G C G + A RL M K D N Y+ + G+CK + A L+
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258
Query: 281 DELRKRK---LL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
E+ K L+ +A T+ +I + +++EA + M + G NRVT LI
Sbjct: 259 AEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
Query: 336 LCKNGCDEEAKELMKMM----IMQGIR-PDCITYTTL-ITHFNKKHHPEEVIALHDYMIL 389
+ +N DE+ K L K++ + G+ +C + T+ + + E++ L M++
Sbjct: 319 VLEN--DEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRL---MLV 373
Query: 390 KGVIPD 395
+GV PD
Sbjct: 374 RGVRPD 379
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 5/153 (3%)
Query: 260 YNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMK 318
YN I ++A L+ E+ L D T+ ++I+GY N+G+ID+A+ L EM
Sbjct: 168 YNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMS 227
Query: 319 SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG----IRPDCITYTTLITHFNKK 374
N VTY+ ++ +CK+G E A EL+ M + I P+ +TYT +I F +K
Sbjct: 228 KHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEK 287
Query: 375 HHPEEVIALHDYMILKGVIPDQKTYDAIVTPFL 407
EE + + D M +G +P++ T ++ L
Sbjct: 288 RRVEEALLVLDRMGNRGCMPNRVTACVLIQGVL 320
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 16/271 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+++G C G +D A ++ K+M + + NSV+Y+ I+ G CK G + A E+L +M
Sbjct: 206 MINGYCNAGKIDDAWRLAKEM---SKHDCVLNSVTYSRILEGVCKSGDMERALELLAEME 262
Query: 75 KAG----FEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
K P+ TY +I + +EE+L + D M RG PN V ++ + +
Sbjct: 263 KEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLEN 322
Query: 131 GDMEEASKVLSDMIDKHICPDQYS----YAILTEGLCRNGYLTEALKLHNQILKFDLIED 186
+E K LS +IDK + S ++ T L R EA K+ +L + D
Sbjct: 323 ---DEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPD 379
Query: 187 AFSLNILLNYICKSXXXXXXXXXXGSMITRGLPP--DVYTKATVIDGNCKLGNTEKALRL 244
+ + + +C + + + D A ++ G C+ GN+ +A +L
Sbjct: 380 GLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKL 439
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKMASTDV 275
M+ + ++ I L K D+
Sbjct: 440 AKSMLDKKMRLKVSHVEKIIEALKKTGDEDL 470
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 150/353 (42%), Gaps = 8/353 (2%)
Query: 58 CKKGGLLL-AEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPN 116
CK+ G L A ++ +++ E ++ +T+ID Y G E+ +L + G+ +
Sbjct: 533 CKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLD 592
Query: 117 IVVYNSILYWLYRHGDMEEASKVLSDMID-KHICPDQYSYAILTEGLCRNGYLTEALKLH 175
+ ++ ++ + G +EEA VL M + K I PD Y + + + + L+
Sbjct: 593 RIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLY 652
Query: 176 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID--GNC 233
+I K + + N ++N ++ MI G P+ T ++D G
Sbjct: 653 YRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKA 712
Query: 234 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDAT 292
KL L L + K ++ YN+ I K + + ++ +
Sbjct: 713 KLFKKVNELFL---LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLE 769
Query: 293 TFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
+NTL+ Y Q+++ + MK + TYN +IN+ + G +E +++K +
Sbjct: 770 AYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL 829
Query: 353 IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 405
G+ PD +Y TLI + EE + L M + +IPD+ TY +VT
Sbjct: 830 KESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTA 882
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 172/409 (42%), Gaps = 66/409 (16%)
Query: 10 IKEW-VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 68
++ W V+L+ + G ++LA ++ M G S PN ++YN++I G+ K + A+
Sbjct: 314 LENWLVMLNAYSQQGKMELAESILVSME-AAGFS--PNIIAYNTLITGYGKIFKMEAAQG 370
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
+ + G EP +Y ++I+G+ R + EE+ E+ G PN +++
Sbjct: 371 LFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQA 430
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLI---- 184
++GD + A K + DM QYS L L+ + ++ K D++
Sbjct: 431 KYGDRDGAIKTIEDMTG---IGCQYS-----------SILGIILQAYEKVGKIDVVPCVL 476
Query: 185 EDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGN--------CK-L 235
+ +F +I LN S GL + + + + + CK
Sbjct: 477 KGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKES 536
Query: 236 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFN 295
G A+++YN ++ DE+ NL I +
Sbjct: 537 GQLTDAVKIYNHKMESDEEINLHIT----------------------------------S 562
Query: 296 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 355
T+I Y+ G+ EA L +KS G+ +R+ ++ ++ + K G EEA ++++M Q
Sbjct: 563 TMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQ 622
Query: 356 -GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
I PD + ++ + K +++ L+ + G+ +Q+ Y+ ++
Sbjct: 623 KDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVI 671
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 158/368 (42%), Gaps = 43/368 (11%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P+ SY S+I G+ + A+ ++ + G++P+ TLI+ A++G + +++
Sbjct: 382 PDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKT 441
Query: 105 CDEM-----------------------------VERGLFPNIV-----VYNSILYWLYRH 130
++M V +G F N + ++S++ +H
Sbjct: 442 IEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKH 501
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSL 190
G +++ +L + + + + Y +L +G LT+A+K++N ++ D +
Sbjct: 502 GMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHIT 561
Query: 191 NILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK 250
+ +++ ++ + G+ D + V+ K G+ E+A + +
Sbjct: 562 STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSV---LEI 618
Query: 251 MDEQ----PNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSG 305
MDEQ P++ ++ + K D ++L +RK + + +N +I+ + +
Sbjct: 619 MDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARAL 678
Query: 306 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 365
+DE G EM G + N VT+N L+++ K ++ EL + G+ D I+Y
Sbjct: 679 PLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYN 737
Query: 366 TLITHFNK 373
T+I + K
Sbjct: 738 TIIAAYGK 745
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEM 108
+YN++++ + K + +L M K+ P TY +I+ Y G ++E + E+
Sbjct: 770 AYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL 829
Query: 109 VERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYL 168
E GL P++ YN+++ G +EEA ++ +M ++I PD+ +Y L L RN
Sbjct: 830 KESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
Query: 169 TEALK 173
EA+K
Sbjct: 890 LEAIK 894
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LLD K ++ ++K+M T P+ +YN +IN + ++G + +VL ++
Sbjct: 774 LLDAYGKDKQMEKFRSILKRMKKSTSG---PDHYTYNIMINIYGEQGWIDEVADVLKELK 830
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
++G P + +Y TLI Y G +EE++ L EM R + P+ V Y +++ L R+ +
Sbjct: 831 ESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFL 890
Query: 135 EASK 138
EA K
Sbjct: 891 EAIK 894
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 126/287 (43%), Gaps = 21/287 (7%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVK-AGFEPSVRTYATLIDGYARWGSLEESLRL 104
N V+Y+ I+ ++ AE+++ ++ F+ S + + T+I + G+++ + +
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKW 232
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI-CPDQYSYAILTEGLC 163
M+E G+ PN+ ++ ++ ++EEA S M I C YS I
Sbjct: 233 FHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMIT----- 287
Query: 164 RNGYLTEALKLHNQILK-FDLI-EDAFSLN-----ILLNYICKSXXXXXXXXXXGSMITR 216
+ L+L+++ + DL+ +D L ++LN + SM
Sbjct: 288 ----IYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAA 343
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
G P++ T+I G K+ E A L++ + + +P+ T Y S I G + + + A
Sbjct: 344 GFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEA 403
Query: 277 KNLVDELRKRKLLDATTFN--TLISGYSNSGQIDEAFGLTTEMKSLG 321
K+ EL KR +FN TLI+ + G D A +M +G
Sbjct: 404 KHYYQEL-KRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG 449
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 81/177 (45%)
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKR 286
TVI K GN + A + ++ M++ +PN+ + K + + A+ +RK
Sbjct: 215 TVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKF 274
Query: 287 KLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAK 346
++ + ++++I+ Y+ D+A + MK + + ++N + G E A+
Sbjct: 275 GIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAE 334
Query: 347 ELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
++ M G P+ I Y TLIT + K E L + G+ PD+ +Y +++
Sbjct: 335 SILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMI 391
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 112/286 (39%), Gaps = 28/286 (9%)
Query: 116 NIVVYNSI---LYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEAL 172
N+V SI + L G ++EA M + H PD Y+Y + LCR G +A
Sbjct: 161 NVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKAR 220
Query: 173 KL--HNQILKFDLIEDAFSLNILLNYICK-----------SXXXXXXXXXXGSMITRGLP 219
L Q+ F D ++ IL++ C+ M+ RG
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
PDV T +IDG CK +AL L+ M PN YNSFI + A +
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEM 340
Query: 280 VDELRK--RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
+ ++K + ++T+ LI + + EA L EM GL TY + + L
Sbjct: 341 MRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALS 400
Query: 338 KNG----CDEEAKELMKMMIMQ------GIRPDCITYTTLITHFNK 373
G DEE + M+ I Q I+P + +F+K
Sbjct: 401 SEGLASTLDEELHKRMREGIQQRYSRVMKIKPTMARKEVVRKYFHK 446
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 101/256 (39%), Gaps = 34/256 (13%)
Query: 154 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 213
S L + L G++ EAL ++ ++ D ++ N ++N +C+ M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 214 ITRGL--PPDVYTKATVIDGNCKLG---NTEKALRLYNGMIKMDEQPNLTIYNSFINGLC 268
G PPD YT +I C+ G KA+R M + + ++ F+
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIR--RRMWEANRMFREMLFRGFVP--- 281
Query: 269 KMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 328
D T+N LI G + +I A L +MK+ G N+VT
Sbjct: 282 ---------------------DVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVT 320
Query: 329 YNTLINLLCKNGCDEEAKELMKMM--IMQGIRPDCITYTTLITHFNKKHHPEEVIALHDY 386
YN+ I E A E+M+ M + G+ P TYT LI + E L
Sbjct: 321 YNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIHALVETRRAAEARDLVVE 379
Query: 387 MILKGVIPDQKTYDAI 402
M+ G++P + TY +
Sbjct: 380 MVEAGLVPREYTYKLV 395
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 14/201 (6%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE--PSVRTYATLIDGYARWG------ 96
P+ +YN+IIN C+ G A +L M GF P TY LI Y R+G
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 97 -----SLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 151
+ E+ R+ EM+ RG P++V YN ++ + + A ++ DM K P+
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILKFDL-IEDAFSLNILLNYICKSXXXXXXXXXX 210
Q +Y + A+++ + K + + + L++ + ++
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLV 377
Query: 211 GSMITRGLPPDVYTKATVIDG 231
M+ GL P YT V D
Sbjct: 378 VEMVEAGLVPREYTYKLVCDA 398
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 236 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR---KRKLLDAT 292
G ++AL + M + +P++ YN+ IN LC++ + A+ L+D+++ R D
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 293 TFNTLISGYSNSG-----------QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGC 341
T+ LIS Y G ++ EA + EM G + VTYN LI+ CK
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 342 DEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGV-IPDQKTYD 400
A EL + M +G P+ +TY + I +++ + E I + M G +P TY
Sbjct: 299 IGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYT 358
Query: 401 AIV 403
++
Sbjct: 359 PLI 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKG-----------GL 63
+++ C+ G+ A ++ +M L G P++ +Y +I+ +C+ G +
Sbjct: 206 IINALCRVGNFKKARFLLDQMQL-PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRM 264
Query: 64 LLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSI 123
A + +M+ GF P V TY LIDG + + +L L ++M +G PN V YNS
Sbjct: 265 WEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSF 324
Query: 124 LYWLYRHGDMEEASKVLSDMID-KHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD 182
+ + ++E A +++ M H P +Y L L EA L ++++
Sbjct: 325 IRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAG 384
Query: 183 LIEDAFSLNILLN 195
L+ ++ ++ +
Sbjct: 385 LVPREYTYKLVCD 397
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 268 CKMASTDVAKNLVDELRK-------RKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
C +A + K L D LR+ + ++ + L+ G + EA MK
Sbjct: 135 CLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEY 194
Query: 321 GLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIR--PDCITYTTLITHFNK----- 373
+ YNT+IN LC+ G ++A+ L+ M + G R PD TYT LI+ + +
Sbjct: 195 HCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQT 254
Query: 374 ------KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ E + M+ +G +PD TY+ ++
Sbjct: 255 GCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 166/414 (40%), Gaps = 43/414 (10%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFE 79
C T + LK +K M + PN +Y S++ L ++ G ++K G E
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 80 PSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKV 139
+ LID YA+ G+LE+S RLC + + NIV +N++L Y + D +
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDS-RLCFDYIRD---KNIVCWNALLSG-YANKDGPICLSL 403
Query: 140 LSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN-------- 191
M+ P +Y+++ + C +TE +LH+ I++ ++ + L+
Sbjct: 404 FLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 192 --------ILLNYICKSXXXXXXXXXXGSMITRGL------------PPDVYTKATVIDG 231
+LL++ G RG PD + I
Sbjct: 460 NQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAA 519
Query: 232 NCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDA 291
+ E+ + L+ M++ + +P+ + S ++ K+ + ++ + K A
Sbjct: 520 CSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCA 579
Query: 292 TTF--NTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM 349
TF N LI Y G I + E + N +T+ LI+ L +G +EA E
Sbjct: 580 DTFVCNVLIDMYGKCGSIRSVMKVFEETRE----KNLITWTALISCLGIHGYGQEALEKF 635
Query: 350 KMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
K + G +PD +++ +++T +E + L M GV P+ Y V
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAV 689
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 142/349 (40%), Gaps = 49/349 (14%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT------------------ 87
N V +N++++G+ K G + L M++ GF P+ T++T
Sbjct: 381 NIVCWNALLSGYANKDGPICLSLFL-QMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIV 439
Query: 88 -------------LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY-RHGDM 133
L+ YA+ + ++L L D P VV +I+ +Y R G
Sbjct: 440 RMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASG----PTSVVPLNIVAGIYSRRGQY 495
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
E+ K++S + PD S+ I R+ Y E ++L +L+ ++ D ++ +
Sbjct: 496 HESVKLISTLEQ----PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSI 551
Query: 194 LNYICKSXXXXXXXXXXGSMITRG--LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKM 251
L+ +C +IT+ D + +ID K G+ ++++ +
Sbjct: 552 LS-LCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVF----EE 606
Query: 252 DEQPNLTIYNSFINGL-CKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEA 310
+ NL + + I+ L + + + L D +F ++++ + G + E
Sbjct: 607 TREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666
Query: 311 FGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
GL +MK G+ Y ++LL +NG +EA+ L++ M P
Sbjct: 667 MGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAP 715
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 145/356 (40%), Gaps = 13/356 (3%)
Query: 50 YNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
Y + + K G A EVL +M G S Y+ LI +A + + +L E
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
+ L + + ++ R G+ME +V++ M + + G +
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFA 370
Query: 170 EALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVI 229
EA+K++ +K + + I +N C+ M+ +G V + ++
Sbjct: 371 EAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 230 DGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL 289
D K A+RL M + +PN+ IYNS I+ + A+ + E+++ K+L
Sbjct: 431 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVL 490
Query: 290 -DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKEL 348
D ++ ++IS Y+ S +++ L E + +R ++ + K +E L
Sbjct: 491 PDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRL 550
Query: 349 MKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
++ M ++G R D Y++ + AL D + + Q+++DA T
Sbjct: 551 LQDMKVEGTRLDARLYSSALN------------ALRDAGLNSQIRWLQESFDAAQT 594
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%)
Query: 48 VSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDE 107
V+Y IN +C+ AE + +MVK GF+ V Y+ ++D Y + L +++RL +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGY 167
M +RG PNI +YNS++ R D+ A K+ +M + PD+ SY + R+
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 168 LTEALKLHNQI 178
L ++L+ +
Sbjct: 509 LERCVELYQEF 519
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 13/266 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNL-MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 72
+L+ G C G L+ A ++ M ++ + V Y +++ C G + A E+LG
Sbjct: 192 ILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGK 251
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESL----RLCDEMVERGLFPNIVVYNSILYWLY 128
+++ G + R Y + G+ W S E + RL E + RG P + Y+++ L+
Sbjct: 252 ILRKGLKAPKRCYHHIEAGH--WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLF 309
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN-QILKFDLIEDA 187
G + E +VL M K P + Y + LCR G L EA+ + N ++++ +
Sbjct: 310 EEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTV 369
Query: 188 FSLNILLNYIC---KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 244
N+L+ +C KS ++ + Y T++DG C+ G +A ++
Sbjct: 370 GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ--TLVDGLCRDGQFLEASQV 427
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKM 270
M+ P + Y+ I GLC M
Sbjct: 428 MEEMLIKSHFPGVETYHMMIKGLCDM 453
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 170/437 (38%), Gaps = 80/437 (18%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N Y ++I+ K +L + V+ M + E +A++I ++R G LE+++ L
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEA----------------------------- 136
+ E + ++++L + + ++E A
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 137 -------SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL----HNQILKFDLIE 185
S+V +M + PD+ SY IL +G C G L EA L +I + E
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE 224
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGL--PPDVYTKATVIDGNCKLGNTEKALR 243
D ILL+ +C + G ++ +GL P Y E+ R
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 244 L---------------YNGM----------IKMDE----------QPNLTIYNSFINGLC 268
L Y+ M ++ +E +P IY + + LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 269 KMASTDVAKNLVDE--LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM-KSLGLSAN 325
+ A +++++ ++ L +N LI G + G+ EA G +M K + AN
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 385
TY TL++ LC++G EA ++M+ M+++ P TY +I E + +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 386 YMILKGVIPDQKTYDAI 402
M+ + ++P+ + A+
Sbjct: 465 EMVSQDMVPESSVWKAL 481
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 38/233 (16%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD-E 107
SY+++ ++G L+ EEVL M GFEP+ Y + R G L+E++ + + E
Sbjct: 300 SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCRNG 166
M++ P + VYN ++ L G EA L M + C ++ +Y L +GLCR+G
Sbjct: 360 MMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDG 419
Query: 167 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 226
EA +Q+++ LI+ F P V T
Sbjct: 420 QFLEA----SQVMEEMLIKSHF-------------------------------PGVETYH 444
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
+I G C + +A+ M+ D P +++ + +C + DV + L
Sbjct: 445 MMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC-FCAIDVVEIL 496
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK-AGF 78
C+ G L A+ V+ K +M G+ + P YN +I G C G + A L M K
Sbjct: 344 CRAGKLKEAVSVINK-EMMQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSC 401
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
+ TY TL+DG R G E+ ++ +EM+ + FP + Y+ ++ L EA
Sbjct: 402 VANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVM 461
Query: 139 VLSDMIDKHICPDQYSYAILTEGLC 163
L +M+ + + P+ + L E +C
Sbjct: 462 WLEEMVSQDMVPESSVWKALAESVC 486
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 150/374 (40%), Gaps = 17/374 (4%)
Query: 44 WPNSVSYNSIINGFCKKG-----GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 98
WP ++ S+++ KK L L EE G SV YAT+ID + +
Sbjct: 6 WPRVLT-PSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSV--YATMIDILGKSNRV 62
Query: 99 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
E + + M E V+ S++ R G +E+A + + + + S+ L
Sbjct: 63 LEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTL 122
Query: 159 TEGLCRNGYLTEALKLHNQ-ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ + + L A + + +++ +LN+L+ +C+ M +G
Sbjct: 123 LQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG 182
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ----PNLTIYNSFINGLCKMAST 273
PD + ++ G C G E+A L M Q ++ +Y ++ LC
Sbjct: 183 CYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEV 242
Query: 274 DVAKNLVDE-LRKRKLLDATTFNTLISGY--SNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
D A ++ + LRK ++ + +G+ S+S I+ L TE G +Y+
Sbjct: 243 DDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYS 302
Query: 331 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
+ L + G E +E++ M +G P Y + + +E +++ + +++
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 391 G-VIPDQKTYDAIV 403
G +P Y+ ++
Sbjct: 363 GHCLPTVGVYNVLI 376
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 13/266 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNL-MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD 72
+L+ G C G L+ A ++ M ++ + V Y +++ C G + A E+LG
Sbjct: 192 ILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGK 251
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESL----RLCDEMVERGLFPNIVVYNSILYWLY 128
+++ G + R Y + G+ W S E + RL E + RG P + Y+++ L+
Sbjct: 252 ILRKGLKAPKRCYHHIEAGH--WESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLF 309
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN-QILKFDLIEDA 187
G + E +VL M K P + Y + LCR G L EA+ + N ++++ +
Sbjct: 310 EEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTV 369
Query: 188 FSLNILLNYIC---KSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 244
N+L+ +C KS ++ + Y T++DG C+ G +A ++
Sbjct: 370 GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQ--TLVDGLCRDGQFLEASQV 427
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKM 270
M+ P + Y+ I GLC M
Sbjct: 428 MEEMLIKSHFPGVETYHMMIKGLCDM 453
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 170/437 (38%), Gaps = 80/437 (18%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
N Y ++I+ K +L + V+ M + E +A++I ++R G LE+++ L
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEA----------------------------- 136
+ E + ++++L + + ++E A
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 137 -------SKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL----HNQILKFDLIE 185
S+V +M + PD+ SY IL +G C G L EA L +I + E
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE 224
Query: 186 DAFSLNILLNYICKSXXXXXXXXXXGSMITRGL--PPDVYTKATVIDGNCKLGNTEKALR 243
D ILL+ +C + G ++ +GL P Y E+ R
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 244 L---------------YNGM----------IKMDE----------QPNLTIYNSFINGLC 268
L Y+ M ++ +E +P IY + + LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 269 KMASTDVAKNLVDE--LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEM-KSLGLSAN 325
+ A +++++ ++ L +N LI G + G+ EA G +M K + AN
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHD 385
TY TL++ LC++G EA ++M+ M+++ P TY +I E + +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 386 YMILKGVIPDQKTYDAI 402
M+ + ++P+ + A+
Sbjct: 465 EMVSQDMVPESSVWKAL 481
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 38/233 (16%)
Query: 49 SYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCD-E 107
SY+++ ++G L+ EEVL M GFEP+ Y + R G L+E++ + + E
Sbjct: 300 SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 108 MVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHIC-PDQYSYAILTEGLCRNG 166
M++ P + VYN ++ L G EA L M + C ++ +Y L +GLCR+G
Sbjct: 360 MMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDG 419
Query: 167 YLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKA 226
EA +Q+++ LI+ F P V T
Sbjct: 420 QFLEA----SQVMEEMLIKSHF-------------------------------PGVETYH 444
Query: 227 TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
+I G C + +A+ M+ D P +++ + +C + DV + L
Sbjct: 445 MMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC-FCAIDVVEIL 496
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 20 CKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVK-AGF 78
C+ G L A+ V+ K +M G+ + P YN +I G C G + A L M K
Sbjct: 344 CRAGKLKEAVSVINK-EMMQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSC 401
Query: 79 EPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASK 138
+ TY TL+DG R G E+ ++ +EM+ + FP + Y+ ++ L EA
Sbjct: 402 VANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVM 461
Query: 139 VLSDMIDKHICPDQYSYAILTEGLC 163
L +M+ + + P+ + L E +C
Sbjct: 462 WLEEMVSQDMVPESSVWKALAESVC 486
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 150/374 (40%), Gaps = 17/374 (4%)
Query: 44 WPNSVSYNSIINGFCKKG-----GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 98
WP ++ S+++ KK L L EE G SV YAT+ID + +
Sbjct: 6 WPRVLT-PSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSV--YATMIDILGKSNRV 62
Query: 99 EESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAIL 158
E + + M E V+ S++ R G +E+A + + + + S+ L
Sbjct: 63 LEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTL 122
Query: 159 TEGLCRNGYLTEALKLHNQ-ILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ + + L A + + +++ +LN+L+ +C+ M +G
Sbjct: 123 LQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQG 182
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQ----PNLTIYNSFINGLCKMAST 273
PD + ++ G C G E+A L M Q ++ +Y ++ LC
Sbjct: 183 CYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEV 242
Query: 274 DVAKNLVDE-LRKRKLLDATTFNTLISGY--SNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
D A ++ + LRK ++ + +G+ S+S I+ L TE G +Y+
Sbjct: 243 DDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYS 302
Query: 331 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
+ L + G E +E++ M +G P Y + + +E +++ + +++
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 391 G-VIPDQKTYDAIV 403
G +P Y+ ++
Sbjct: 363 GHCLPTVGVYNVLI 376
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 162/370 (43%), Gaps = 27/370 (7%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
P++ ++ ++ + + ++ G +V GF+ SV LI Y G L ++ ++
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
DEM L ++ V+N++L + G+M+EA +L M ++ S+ + G +
Sbjct: 174 FDEM----LVKDVNVWNALLAGYGKVGEMDEARSLLEMM--PCWVRNEVSWTCVISGYAK 227
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYT 224
+G +EA+++ ++L ++ D +L +L+ + RG+ V
Sbjct: 228 SGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSL 287
Query: 225 KATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR 284
VID K GN KAL ++ + + N+ + + I GL A + + +
Sbjct: 288 NNAVIDMYAKSGNITKALDVFECV----NERNVVTWTTIIAGLATHGHGAEALAMFNRMV 343
Query: 285 KRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKS-LGLSANRVTYNTLINLLCKNGCD 342
K + + TF ++S S+ G +D L M+S G+ N Y +I+LL + G
Sbjct: 344 KAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKL 403
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPE-------EVIALH-----DYMILK 390
EA E++K M + + + +L+ N H E E+I L +YM+L
Sbjct: 404 READEVIKSM---PFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLA 460
Query: 391 GVIPDQKTYD 400
+ + +D
Sbjct: 461 NLYSNLGRWD 470
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 142/311 (45%), Gaps = 17/311 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVW-PNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
LL G K G +D A +++ M W N VS+ +I+G+ K G A EV M
Sbjct: 188 LLAGYGKVGEMDEARSLLEMM------PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ EP T ++ A GSLE R+C + RG+ + + N+++ + G++
Sbjct: 242 LMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNI 301
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+A V + ++++ ++ + GL +G+ EAL + N+++K + + + +
Sbjct: 302 TKALDVFECVNERNVV----TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAI 357
Query: 194 LNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIK-M 251
L+ SM ++ G+ P++ +ID LG K LR + +IK M
Sbjct: 358 LSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMID---LLGRAGK-LREADEVIKSM 413
Query: 252 DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAF 311
+ N I+ S + ++ + + EL K + ++ + L + YSN G+ DE+
Sbjct: 414 PFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESR 473
Query: 312 GLTTEMKSLGL 322
+ MK +G+
Sbjct: 474 MMRNMMKGIGV 484
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 94/219 (42%), Gaps = 25/219 (11%)
Query: 152 QYSYAILTEGLCRNGYLTEALKLHNQILK-FDLIEDAFSLNILLNYICKSXXXXXXXXXX 210
+Y+Y++ T C N YL HN +++ L+++ + +I + K
Sbjct: 64 RYAYSVFTHQPCPNTYL------HNTMIRALSLLDEPNAHSIAITVYRK----------- 106
Query: 211 GSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKM 270
+ PD +T V+ ++ + +++ ++ ++ + I
Sbjct: 107 --LWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSC 164
Query: 271 ASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
A+ + DE+ + D +N L++GY G++DEA L M N V++
Sbjct: 165 GGLGDARKMFDEMLVK---DVNVWNALLAGYGKVGEMDEARSLLEMMPCW--VRNEVSWT 219
Query: 331 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
+I+ K+G EA E+ + M+M+ + PD +T +++
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 111/250 (44%), Gaps = 8/250 (3%)
Query: 146 KHICPDQYSYA---ILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
K + PD + A L LC+ +T+A +++ LK D + NILL+
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLS---GWKS 226
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
M +GL PDV T ++ID CK EKA +L + M + +E P++ Y +
Sbjct: 227 SEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT 286
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
I GL + D A+ ++ E+++ D +N I + + ++ +A L EM G
Sbjct: 287 VIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 322 LSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVI 381
LS N TYN +L + EL M+ P+ + LI F + + +
Sbjct: 347 LSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAM 406
Query: 382 ALHDYMILKG 391
L + M++KG
Sbjct: 407 RLWEDMVVKG 416
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 84/181 (46%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M G + P+ V+YNS+I+ +CK + A +++ M + P V TY T+I G G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+++ + EM E G +P++ YN+ + + +A K++ +M+ K + P+ +Y +
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L L + +L+ ++L + + + S L+ + M+ +G
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 218 L 218
Sbjct: 417 F 417
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 149/337 (44%), Gaps = 50/337 (14%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLC 105
++ +N+++ C++ + A V + K F+P ++T+ L+ G W S EE+
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSG---WKSSEEAEAFF 234
Query: 106 DEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN 165
+EM +GL P++V YNS++ + ++E+A K++ M ++ PD +Y + GL
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 166 GYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
G +A ++ ++ ++ D + N + C I R
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFC---------------IAR--------- 330
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK 285
+LG+ +K L + M+K PN T YN F L + D+ ++ EL
Sbjct: 331 --------RLGDADK---LVDEMVKKGLSPNATTYNLFFRVLS--LANDLGRSW--ELYV 375
Query: 286 RKLLDATTFNT-----LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNG 340
R L + NT LI + ++D A L +M G + + + L++LLC
Sbjct: 376 RMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLA 435
Query: 341 CDEEAKELMKMMIMQGIRPDCITYT--TLITHFNKKH 375
EEA++ + M+ +G RP +++ L+ KH
Sbjct: 436 KVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKH 472
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 10/199 (5%)
Query: 216 RGLPPDVYTKA---TVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMAS 272
+ L PD + A ++ C+ + A +Y+ + K QP+L +N ++G
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGWKSSEE 229
Query: 273 TDVAKNLVDELRKRKLL--DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYN 330
+ + K K L D T+N+LI Y +I++A+ L +M+ + + +TY
Sbjct: 230 AEAFFEEM----KGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYT 285
Query: 331 TLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
T+I L G ++A+E++K M G PD Y I +F + L D M+ K
Sbjct: 286 TVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Query: 391 GVIPDQKTYDAIVTPFLLA 409
G+ P+ TY+ LA
Sbjct: 346 GLSPNATTYNLFFRVLSLA 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D CK ++ A K++ KM P+ ++Y ++I G G A EVL +M
Sbjct: 252 LIDVYCKDREIEKAYKLIDKMR---EEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMK 308
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
+ G P V Y I + L ++ +L DEMV++GL PN YN L D+
Sbjct: 309 EYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLG 368
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKL 174
+ ++ M+ P+ S L + R+ + A++L
Sbjct: 369 RSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 408
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 182/398 (45%), Gaps = 26/398 (6%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L++G + G + A+++ K+M+L + + P+S + S++ G L +++
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHL---DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
K GF + + L++ YA+ +E +L D +E + N+V++N +L D+
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETAL---DYFLETEV-ENVVLWNVMLVAYGLLDDLR 472
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+ ++ M + I P+QY+Y + + R G L ++H+QI+K + +A+ ++L+
Sbjct: 473 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI 532
Query: 195 NYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM----IK 250
+ K ++ R DV + T+I G + +KAL + M I+
Sbjct: 533 DMYAK----LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 251 MDEQPNLTIYNSFINGL--CKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQID 308
DE LT S GL K A+ V D N L++ YS G+I+
Sbjct: 589 SDE-VGLTNAVSACAGLQALKEGQQIHAQACVSGFSS----DLPFQNALVTLYSRCGKIE 643
Query: 309 EAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
E++ L E G + + +N L++ ++G +EEA + M +GI + T+ + +
Sbjct: 644 ESY-LAFEQTEAG---DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAV 699
Query: 369 THFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVTPF 406
++ + ++ +H + G + + +A+++ +
Sbjct: 700 KAASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 737
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 150/341 (43%), Gaps = 17/341 (4%)
Query: 33 KKMNLMTGNSVWPNSVSYNSIINGFCKKGGLL-LAEEVLGDMVKAGFEPSVRTYATLIDG 91
K+++ + + PN + ++ G K G L ++ ++K G + + L D
Sbjct: 70 KRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 92 YARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPD 151
Y G L + ++ DEM ER +F +N ++ L + E + M+ +++ P+
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIF----TWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 152 QYSYAILTEGLCRNGYLTEAL--KLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXX 209
+ +++ + E CR G + + ++H +IL L + N L++ ++
Sbjct: 186 EGTFSGVLEA-CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV 244
Query: 210 XGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCK 269
+ + D + +I G K +A+RL+ M + P ++S ++ K
Sbjct: 245 FDGLRLK----DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK 300
Query: 270 MASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVT 328
+ S ++ + L + K D N L+S Y + G + A + + M + VT
Sbjct: 301 IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ----RDAVT 356
Query: 329 YNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
YNTLIN L + G E+A EL K M + G+ PD T +L+
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 142/344 (41%), Gaps = 18/344 (5%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
+ ++ ++M + + PN +Y SI+ + G L L E++ ++K F+ + +
Sbjct: 474 SFRIFRQMQI---EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
LID YA+ G L+ + +++ R ++V + +++ ++ ++A M+D+
Sbjct: 531 LIDMYAKLGKLDTAW----DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
I D+ L E ++H Q D N L+ +
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
+ D ++ G + GN E+ALR++ M + N + S +
Sbjct: 647 LA----FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 702
Query: 268 CKMASTDVAKNLVDELRKRKLLDATTF-NTLISGYSNSGQIDEAFGLTTEMKSLGLSA-N 325
+ A+ K + + K T N LIS Y+ G I +A E + L +S N
Sbjct: 703 SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA-----EKQFLEVSTKN 757
Query: 326 RVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
V++N +IN K+G EA + MI +RP+ +T +++
Sbjct: 758 EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 801
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 165/404 (40%), Gaps = 58/404 (14%)
Query: 53 IINGFCKKG---GLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMV 109
II+GF KKG ++ A E ++ P++ T+ID G +S + ++++
Sbjct: 238 IIHGFGKKGDMVSVMTAYEACKQILDT---PNMYICRTMIDVCGLCGDYVKSRYIYEDLL 294
Query: 110 ERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLT 169
+ + PNI V NS++ D+ KV +M + D SY IL + C G +
Sbjct: 295 KENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVD 352
Query: 170 EALKLHNQILKFD----LIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTK 225
A ++ + + + L DAF+ ++ + M + G+ P+ +T
Sbjct: 353 LAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTW 412
Query: 226 ATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELR- 284
+++I G E+A L+ M+ +PN +N ++ + D A L +
Sbjct: 413 SSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKG 472
Query: 285 -------------------KRKLLDATTFNTLISGYSNSGQIDEA----FGLTT------ 315
+L +L++ SNS I + F TT
Sbjct: 473 SSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNIL 532
Query: 316 ----------------EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
EMKSLGLS N++T++TLI++ +G E A +++ M G RP
Sbjct: 533 LKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRP 592
Query: 360 DCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
D + YTT I + + +L + M + P+ TY+ ++
Sbjct: 593 DVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLL 636
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 159/381 (41%), Gaps = 22/381 (5%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWP-NSVSYNSIINGFCKKGGLLLAEEVLGD 72
+LL C G +DLA + K+ M + + ++ +Y +II F A +V D
Sbjct: 340 ILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDD 399
Query: 73 MVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGD 132
M G P+ T+++LI A G +E++ L +EM+ G PN +N +L+
Sbjct: 400 MKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQ 459
Query: 133 MEEASKVLSDMIDKHICPDQYSYAILTEG-------LCRNGYLTEALKLHNQIL-----K 180
+ A ++ + Y+ I+++G L NG + + N +
Sbjct: 460 YDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKR 519
Query: 181 FDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEK 240
F + NILL C + M + GL P+ T +T+ID G+ E
Sbjct: 520 FCFKPTTATYNILLK-ACGT-DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEG 577
Query: 241 ALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLIS 299
A+R+ M +P++ Y + I + +A +L +E+R+ ++ + T+NTL+
Sbjct: 578 AVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLK 637
Query: 300 GYSNSG---QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
S G ++ + + +M++ G N LI C+ E + K+ +G
Sbjct: 638 ARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGVIQENGQSQDKISDQEG 697
Query: 357 I---RPDCITYTTLITHFNKK 374
RP + + TH ++
Sbjct: 698 DNAGRPVSLLIEKVATHMQER 718
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 20/323 (6%)
Query: 16 LDGACKTGSLDLALKVMKKMNLMTGNS--VWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L G + G+ L V++K T N VW N+++Y S + F L LA +V M
Sbjct: 209 LSGYLECGAFKEGLDVLRK----TANEDFVW-NNLTYLSSLRLFSNLRDLNLALQVHSRM 263
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V+ GF V LI+ Y + G + + R+ D+ + +F N + ++ ++
Sbjct: 264 VRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA----YFQDKSF 319
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
EEA + S M K + P++Y++AIL + L + LH +LK N L
Sbjct: 320 EEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNAL 379
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+N KS M R D+ T T+I G G +AL ++ MI E
Sbjct: 380 VNMYAKSGSIEDARKAFSGMTFR----DIVTWNTMISGCSHHGLGREALEAFDRMIFTGE 435
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL--DATTFNTLISGYSNSGQIDEAF 311
PN + + + + + ++L K+ + D + ++ S +G +A
Sbjct: 436 IPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE 495
Query: 312 GLTTEMKSLGLSANRVTYNTLIN 334
M++ + + V + TL+N
Sbjct: 496 DF---MRTAPIEWDVVAWRTLLN 515
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 160/399 (40%), Gaps = 21/399 (5%)
Query: 10 IKEWVLLDGACKTGSLDL-ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEE 68
+ W + + D LK+ K M +G S PN + G + ++
Sbjct: 100 VVSWCAMMKGYQNSGFDFEVLKLFKSM-FFSGESR-PNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 69 VLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLY 128
G +K G TL+ Y+ E++R+ D++ + ++ V++S L
Sbjct: 158 FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP----YCDLSVFSSALSGYL 213
Query: 129 RHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAF 188
G +E VL ++ + +Y L AL++H+++++F +
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 189 SLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGM 248
+ L+N K + +++ T++D + + E+AL L++ M
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQ----NIFLNTTIMDAYFQDKSFEEALNLFSKM 329
Query: 249 IKMDEQPNLTIYNSFINGLCKMA---STDVAKNLVDELRKRKLLDATTFNTLISGYSNSG 305
+ PN + +N + +++ D+ LV L+ N L++ Y+ SG
Sbjct: 330 DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLV--LKSGYRNHVMVGNALVNMYAKSG 387
Query: 306 QIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYT 365
I++A + M + VT+NT+I+ +G EA E MI G P+ IT+
Sbjct: 388 SIEDARKAFSGMTFRDI----VTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFI 443
Query: 366 TLITHFNKKHHPEEVIALHDYMILK-GVIPDQKTYDAIV 403
++ + E+ + + ++ K V PD + Y IV
Sbjct: 444 GVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIV 482
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 239 EKALRLYNGMIKM-DEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD-ATTFNT 296
++A R+Y M KM +P+L YN I LC+ ST + ++V E+ ++ + A +F
Sbjct: 163 KEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGL 222
Query: 297 LISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQG 356
+I G+ + DE + M G+ TYN +I LCK EAK L+ ++
Sbjct: 223 MIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCR 282
Query: 357 IRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+RP+ +TY+ LI F + + +E + L + M+ G PD + Y ++
Sbjct: 283 MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLI 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 111/259 (42%), Gaps = 37/259 (14%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
A +V +M M G + P+ +YN +I C+ G + ++ +M + +P+ ++
Sbjct: 165 ANRVYLEMPKMYG--IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGL 222
Query: 88 LIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH 147
+IDG+ + +E ++ M E G+ + YN ++ L + EA ++ ++
Sbjct: 223 MIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCR 282
Query: 148 ICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXX 207
+ P+ +Y++L G C L EA+ L F++
Sbjct: 283 MRPNSVTYSLLIHGFCSEENLDEAMNL------FEV------------------------ 312
Query: 208 XXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGL 267
M+ G PD T+I CK G+ E AL L ++ + P+ ++ +NGL
Sbjct: 313 -----MVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGL 367
Query: 268 CKMASTDVAKNLVDELRKR 286
+ D AK L+ ++++
Sbjct: 368 ASRSKVDEAKELIAVVKEK 386
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 170 EALKLHNQILKFDLIE-DAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATV 228
EA +++ ++ K IE D + N ++ +C+S M + + P + +
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM 223
Query: 229 IDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRK-RK 287
IDG K ++ ++ M + + YN I LCK + AK L+D + R
Sbjct: 224 IDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRM 283
Query: 288 LLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEA 345
++ T++ LI G+ + +DEA L M G + Y TLI+ LCK G E A
Sbjct: 284 RPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETA 341
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 114 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 173
+P ++N+I+ RH +A +V M+ + PD+YS I+ + + T +
Sbjct: 79 YPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKE 138
Query: 174 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXX--------GS------------- 212
LH+ ++ + D F + + CK+ GS
Sbjct: 139 LHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 213 ----------MITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMI--KMDEQPNLTIY 260
M GL PD +T +V LG+ A +L+ ++ K +E+ ++ +
Sbjct: 199 ANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML 258
Query: 261 NSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL 320
NS I+ K D+A ++ +E+R+R ++ +++++I GY+ +G EA +M+
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVV---SWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 321 GLSANRVTYNTLINLLCKNGCDEEAKELMKMM 352
G+ N++T+ +++ G EE K MM
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFAMM 347
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 171/422 (40%), Gaps = 80/422 (18%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
VL++G +G + A+K M M S V+ +++ G + L +++ G +
Sbjct: 108 VLIEGYSLSGLVGAAVKAYNTM--MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQV 165
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+K GFE + + L+ YA G + ++ ++ + +R N V+YNS++ L G +
Sbjct: 166 IKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR----NTVMYNSLMGGLLACGMI 221
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
E+A ++ M D S+A + +GL +NG EA++ +
Sbjct: 222 EDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFRE---------------- 260
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
M +GL D Y +V+ LG + +++ +I+ +
Sbjct: 261 -------------------MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF 301
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGL 313
Q ++ + ++ I+ CK AK + D ++++ ++ ++ ++ GY +G+ +EA +
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV---SWTAMVVGYGQTGRAEEAVKI 358
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGI---------------- 357
+M+ G+ + T I+ EE + I G+
Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK 418
Query: 358 ---------------RPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
D +++T +++ + + E I L D M+ G+ PD T +
Sbjct: 419 CGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV 478
Query: 403 VT 404
++
Sbjct: 479 IS 480
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 132/306 (43%), Gaps = 15/306 (4%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
L+D CK L A V +M N VS+ +++ G+ + G A ++ DM
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQ-------KNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
++G +P T I A SLEE + + + GL + V NS++ + GD+
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++++++ ++M + D S+ + + G E ++L +++++ L D +L +
Sbjct: 423 DDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV 478
Query: 194 LNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
++ ++ M + G+ P + + +ID + G E+A+R NG M
Sbjct: 479 ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING---MP 535
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFG 312
P+ + + ++ + ++ K + L + + L S Y++ G+ D
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 595
Query: 313 LTTEMK 318
L M+
Sbjct: 596 LRRGMR 601
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 155/344 (45%), Gaps = 26/344 (7%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
LL G ++G LD A +V K+ ++VS+N II+ + KKG + A + M
Sbjct: 176 LLHGYLESGELDEARRVFDKIPE-------KDAVSWNLIISSYAKKGDMGNACSLFSAMP 228
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
S ++ LI GY ++ + D M ++ N V + +++ + GD++
Sbjct: 229 L----KSPASWNILIGGYVNCREMKLARTYFDAMPQK----NGVSWITMISGYTKLGDVQ 280
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFD--LIEDAFSLNI 192
A ++ M K D+ Y + +NG +ALKL Q+L+ + + D +L+
Sbjct: 281 SAEELFRLMSKK----DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSS 336
Query: 193 LLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
+++ + + G+ D ++ID K G+ KA ++++ + K D
Sbjct: 337 VVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKD 396
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
Y++ I G A +L + ++K+ + TF L+S YS+SG + E +
Sbjct: 397 T----VSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGY 452
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 355
MK L + Y ++++L + G EEA EL+K M MQ
Sbjct: 453 KCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQ 496
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 156/372 (41%), Gaps = 27/372 (7%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + + P+S + S++ K ++ + + +K G V L+ Y+R G
Sbjct: 95 MHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGY 154
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+E + + D++ E+ N V +NS+L+ G+++EA +V + +K D S+ +
Sbjct: 155 IELAKKAFDDIAEK----NTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWNL 206
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ + G + A L + + ++ S NIL+ +M +
Sbjct: 207 IISSYAKKGDMGNACSLFSAM----PLKSPASWNILIGGYVNCREMKLARTYFDAMPQK- 261
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
+ + T+I G KLG+ + A L+ M K D+ +Y++ I + A
Sbjct: 262 ---NGVSWITMISGYTKLGDVQSAEELFRLMSKKDK----LVYDAMIACYTQNGKPKDAL 314
Query: 278 NLVDELRKRKLL---DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
L ++ +R D T ++++S S G + + + G+ + + +LI+
Sbjct: 315 KLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLID 374
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIP 394
L K G +A ++ + + D ++Y+ +I E +L MI K + P
Sbjct: 375 LYMKGGDFAKAFKMFSNL----NKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPP 430
Query: 395 DQKTYDAIVTPF 406
+ T+ +++ +
Sbjct: 431 NVVTFTGLLSAY 442
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 151/367 (41%), Gaps = 5/367 (1%)
Query: 39 TGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSL 98
TG + P+ N ++ G G A+++ M G + + I + R
Sbjct: 146 TGQEIHPDVC--NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSET 203
Query: 99 EESLRLCDEMVERGLFPN-IVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+ LRL DE+ + L N ++ IL+ L + +A +L ++ + PD +Y +
Sbjct: 204 NQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRV 263
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ E G L E + + K + + + + + +++
Sbjct: 264 IAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGK 323
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAK 277
P D +I G+ + + A+ M+ + P + + LC+ +D
Sbjct: 324 FPMDNDILDALI-GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLI 382
Query: 278 NLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLL 336
+ L + + +++ +IS +G++ E++ EMK GL+ + YN LI
Sbjct: 383 KAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEAC 442
Query: 337 CKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQ 396
CK AK+L M ++G + + TY LI +++ EE + L D M+ +G+ PD+
Sbjct: 443 CKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDE 502
Query: 397 KTYDAIV 403
Y +++
Sbjct: 503 TIYMSLI 509
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%)
Query: 31 VMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLID 90
++K L++ + SY+ +I+ CK G + + L +M K G P V Y LI+
Sbjct: 381 LIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIE 440
Query: 91 GYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICP 150
+ + + +L DEM G N+ YN ++ L G+ EE+ ++ M+++ I P
Sbjct: 441 ACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEP 500
Query: 151 DQYSYAILTEGLCRNGYLTEALKLHNQILKFD 182
D+ Y L EGLC+ + A+++ + ++ D
Sbjct: 501 DETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 141/372 (37%), Gaps = 13/372 (3%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
V+ + TG+L V+KK + V P S Y + I L A+EV +
Sbjct: 263 VIAEAFVVTGNLYERQVVLKKKRKL---GVAPRSSDYRAFILDLISAKRLTEAKEVAEVI 319
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V F LI G + ++ MV G P I + + L RH
Sbjct: 320 VSGKFPMDNDILDALI-GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKS 378
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
+ K + K + SY+++ LC+ G + E+ ++ K L D N L
Sbjct: 379 DHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNAL 438
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
+ CK+ M G ++ T +I + G E++LRL++ M++
Sbjct: 439 IEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGI 498
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDEL--RKRKLLDATTFNTLISGYSNSGQIDEAF 311
+P+ TIY S I GLCK + A + + R K + + + ++G EA
Sbjct: 499 EPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEAS 558
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCI--TYTTLIT 369
L E + L + V + L C E + M ++ + P + + L+
Sbjct: 559 QLLREREHLEHTGAHV-----VLLKCVADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLA 613
Query: 370 HFNKKHHPEEVI 381
F P+ ++
Sbjct: 614 SFCSSSDPDSIL 625
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 55/316 (17%)
Query: 58 CKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNI 117
CK+ GL A+ M K +R++ T++ G+ R G +E + + D+M +R ++
Sbjct: 282 CKESGL--AKRAFDAMKKK----DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR----DL 331
Query: 118 VVYNSILYWLYRHG-DMEEASKVLSDM-IDKHICPDQYSYAILTEGLCRNGYLTEALKLH 175
V +NS+L+ + G D ++ +M I + + PD+ + L G NG L+ +H
Sbjct: 332 VSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVH 391
Query: 176 NQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKL 235
+++ L DAF + +ID CK
Sbjct: 392 GLVIRLQLKGDAF-----------------------------------LSSALIDMYCKC 416
Query: 236 GNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTF 294
G E+A ++ K + ++ ++ S I GL + A L +++ + + T
Sbjct: 417 GIIERAFMVF----KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTL 472
Query: 295 NTLISGYSNSGQIDEAFGLTTEMK-SLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMI 353
+++ S+SG ++E + MK G Y +L++LLC+ G EEAK++++ +
Sbjct: 473 LAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKM 532
Query: 354 MQGIRPDCITYTTLIT 369
+RP + ++++
Sbjct: 533 --PMRPSQSMWGSILS 546
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 156/397 (39%), Gaps = 54/397 (13%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRL 104
PN YN++I+ + M++ P +T+ L+ + +++
Sbjct: 98 PNVFVYNTMISAVSSSKNECFG--LYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIH-- 153
Query: 105 CDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCR 164
C +V L ++NS++ + G+ A KV + M PD S+ ++ G +
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPH----PDVSSFNVMIVGYAK 209
Query: 165 NGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP---PD 221
G+ EALKL+ +++ + D +++ LL C I R P +
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLL-VCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 222 VYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVD 281
+ ++D K + A R ++ M K D + +N+ + G ++ + A+ + D
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKD----MRSWNTMVVGFVRLGDMEAAQAVFD 324
Query: 282 ELRKRKLL----------------------------------DATTFNTLISGYSNSGQI 307
++ KR L+ D T +LISG +N+G++
Sbjct: 325 QMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGEL 384
Query: 308 DEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTL 367
+ + L L + + LI++ CK G E A M+ D +T++
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF----MVFKTATEKDVALWTSM 440
Query: 368 ITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
IT + ++ + L M +GV P+ T A++T
Sbjct: 441 ITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLT 477
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
+++I+ +CK G + A V K E V + ++I G A G+ +++L+L M E
Sbjct: 407 SALIDMYCKCGIIERAFMVF----KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKH-ICPDQYSYAILTEGLCRNGYLT 169
G+ PN V ++L G +EE V + M DK P+ Y L + LCR G +
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVE 522
Query: 170 EA 171
EA
Sbjct: 523 EA 524
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 174/390 (44%), Gaps = 29/390 (7%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV-----K 75
K G AL+ K+ + V P+ ++ S+I C GL AE +GD+V
Sbjct: 83 KNGLFPEALEFYGKLR---ESKVSPDKYTFPSVIKA-C--AGLFDAE--MGDLVYEQILD 134
Query: 76 AGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEE 135
GFE + L+D Y+R G L + ++ DEM R ++V +NS++ HG EE
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVSWNSLISGYSSHGYYEE 190
Query: 136 ASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN 195
A ++ ++ + I PD ++ + + + + LH LK + N L+
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 196 YICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-Q 254
K M R D + T+I G KL E+++R++ + +D+ +
Sbjct: 251 MYLKFRRPTDARRVFDEMDVR----DSVSYNTMICGYLKLEMVEESVRMF--LENLDQFK 304
Query: 255 PNLTIYNSFINGLCKMASTDVAKNLVDELRKRK-LLDATTFNTLISGYSNSGQIDEAFGL 313
P+L +S + + +AK + + + K +L++T N LI Y+ G + A +
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 314 TTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNK 373
M+ + V++N++I+ ++G EA +L KMM++ + D ITY LI+ +
Sbjct: 365 FNSME----CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Query: 374 KHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+ LH I G+ D +A++
Sbjct: 421 LADLKFGKGLHSNGIKSGICIDLSVSNALI 450
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 150/361 (41%), Gaps = 18/361 (4%)
Query: 46 NSVSYNSIINGFCKKGGLLLAEEVLGDMVK--AGFEPSVRTYATLIDGYARWGSLEESLR 103
+SVSYN++I G+ K L + EE + ++ F+P + T ++++ L +
Sbjct: 272 DSVSYNTMICGYLK---LEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKY 328
Query: 104 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 163
+ + M++ G V N ++ + GDM A V + M C D S+ + G
Sbjct: 329 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME----CKDTVSWNSIISGYI 384
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 223
++G L EA+KL ++ + D + +L++ + + I G+ D+
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444
Query: 224 TKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDEL 283
+ID K G +L++++ M D +N+ I+ + + ++
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFSSMGTGDT----VTWNTVISACVRFGDFATGLQVTTQM 500
Query: 284 RKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCD 342
RK +++ D TF + ++ + + G + N LI + K GC
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 343 EEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAI 402
E + + + M R D +T+T +I + E+ + M G++PD + AI
Sbjct: 561 ENSSRVFERMS----RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAI 616
Query: 403 V 403
+
Sbjct: 617 I 617
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 151/358 (42%), Gaps = 22/358 (6%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+L+D K G + A V M ++VS+NSII+G+ + G L+ A ++ M
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMEC-------KDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
+ + TY LI R L+ L ++ G+ ++ V N+++ + G++
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEV 459
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNIL 193
++ K+ S M D ++ + R G L++ Q+ K +++ D + +
Sbjct: 460 GDSLKIFSSM----GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515
Query: 194 LNYICKSXXXXXXXXXXGSMITR-GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMD 252
L +C S + R G ++ +I+ K G E + R++ M + D
Sbjct: 516 LP-MCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD 574
Query: 253 EQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAF 311
+ + I + A ++ K ++ D+ F +I S+SG +DE
Sbjct: 575 ----VVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGL 630
Query: 312 GLTTEMKS-LGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+MK+ + Y +++LL ++ +A+E ++ M I+PD + +++
Sbjct: 631 ACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM---PIKPDASIWASVL 685
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 149/344 (43%), Gaps = 50/344 (14%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M + PN +++ ++ GL ++ +++K GF+ V LI Y
Sbjct: 104 MKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKK 163
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++ ++ DEM ER N+V +NSI+ L +G + + +MI K CPD+ + +
Sbjct: 164 TSDARKVFDEMTER----NVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVV 219
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
L G L+ +H+Q++ +L + L++ KS M+ +
Sbjct: 220 LLSAC--GGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDK- 276
Query: 218 LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVA 276
+V+T + +I G + G E+AL+L++ M+K +PN Y +F+ LC
Sbjct: 277 ---NVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN---YVTFLGVLC-------- 322
Query: 277 KNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSL-GLSANRVTYNTLINL 335
S++G +D+ + EM+ + + + Y ++++
Sbjct: 323 -----------------------ACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDI 359
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEE 379
L + G EA + +K M + PD + + TL++ + HH E+
Sbjct: 360 LGRAGRLNEAYDFIKKMPFE---PDAVVWRTLLSACS-IHHDED 399
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 173/392 (44%), Gaps = 19/392 (4%)
Query: 21 KTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEP 80
K LD ++ + M + PN+ + NS ++ + G + A V M K
Sbjct: 116 KLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE-NV 174
Query: 81 SVRTYATLIDGYARWGSLEESLRLCDEM----VERGLFPNIVVYNSILYWLYRHGDMEEA 136
+ TY+ ++ A E +LR+ E+ R F ++V+YN+ + R ++ E
Sbjct: 175 TGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCF-DVVLYNTAISLCGRINNVYET 233
Query: 137 SKVLSDMI-DKHICPDQYSYAILTEGLCRNGYLTEALKLHNQIL--KFDLIEDAFSLNIL 193
++ M D HI + +Y++L R G AL ++++++ K L EDA + +
Sbjct: 234 ERIWRVMKGDGHI-GTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDA--MYAM 290
Query: 194 LNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE 253
++ K SM+ +G+ P++ T+I+ K G ++Y+ + +
Sbjct: 291 ISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGH 350
Query: 254 QPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL--LDATTFNTLISGYSNSGQIDEAF 311
+P+ +N+ + L K + L D +R L L+ +NT + G ++A
Sbjct: 351 KPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAV 410
Query: 312 GLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHF 371
L EM+ GL+ + +YN +I+ K+ + A + + M + +P+ TY +L+
Sbjct: 411 KLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSC 470
Query: 372 NKKHHPEEVIALHDYMILKGVIPDQKTYDAIV 403
+EV D ILK V PD Y+A +
Sbjct: 471 IWGSLWDEV---ED--ILKKVEPDVSLYNAAI 497
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 164/393 (41%), Gaps = 31/393 (7%)
Query: 32 MKKMNLMTGNSVWPN-SVSYNSIINGFCKKGGLLLAEEVLGDMVKAGF--EPSVRTYATL 88
M+ +L T N + S +S NG GL L E+ GD + F E + T +
Sbjct: 54 MESFSLATPNMCFRKVSSELDSSFNGENVVCGLELEEKTAGDRNRIHFLEERNEETLSKR 113
Query: 89 IDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHI 148
+ +R + +L L D M GL PN NS L L R+GD+++A V M K
Sbjct: 114 LRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKEN 173
Query: 149 CPDQYSYAILTEGLCRNGYLTEALKLHNQILK-------FDLI--EDAFSLNILLNYICK 199
++Y+++ + + AL++ ++ + FD++ A SL +N + +
Sbjct: 174 VTG-HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYE 232
Query: 200 SXXXXXXXX---XXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPN 256
+ G+ IT L ++ + G +E AL +Y+ M+
Sbjct: 233 TERIWRVMKGDGHIGTEITYSLLVSIFVRC---------GRSELALDVYDEMVNNKISLR 283
Query: 257 LTIYNSFINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTT 315
+ I+ K D+A + + K+ + + NTLI+ +G++ F + +
Sbjct: 284 EDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYS 343
Query: 316 EMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCIT---YTTLITHFN 372
+KSLG + T+N L+ L K E+ +L M+ + + C+ Y T +
Sbjct: 344 VLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENL--CCLNEYLYNTAMVSCQ 401
Query: 373 KKHHPEEVIALHDYMILKGVIPDQKTYDAIVTP 405
K + E+ + L M G+ +Y+ +++
Sbjct: 402 KLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISA 434
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 126/305 (41%), Gaps = 5/305 (1%)
Query: 36 NLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARW 95
+M G+ ++Y+ +++ F + G LA +V +MV +I +
Sbjct: 238 RVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKE 297
Query: 96 GSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSY 155
+ +L++ M+++G+ PN+V N+++ L + G + KV S + PD+Y++
Sbjct: 298 EKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTW 357
Query: 156 AILTEGLCRNGYLTEALKLHNQILKFDL-IEDAFSLNILLNYICKSXXXXXXXXXXGSMI 214
L L + + L+L + I +L + + N + K M
Sbjct: 358 NALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEME 417
Query: 215 TRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTD 274
GL + VI K ++ AL +Y M + D +PN Y S + C S
Sbjct: 418 GSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGSL- 475
Query: 275 VAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLIN 334
+ V+++ K+ D + +N I G + A L +M+ +GL + T ++
Sbjct: 476 --WDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQ 533
Query: 335 LLCKN 339
L K+
Sbjct: 534 NLKKH 538
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 168/446 (37%), Gaps = 78/446 (17%)
Query: 28 ALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYAT 87
A K++K M + PN V+YN+++ + ++G L A +L + GFEP+ TY+T
Sbjct: 203 AEKILKDME---EEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYST 259
Query: 88 LIDGYARW----GSLEESLRLCDEMVERGL-----------------FPNIVVYNSILYW 126
+ Y R G+LE + L ++ +R + F + Y + W
Sbjct: 260 ALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRW 319
Query: 127 LYRHGDME-EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQI------- 178
L + + K+L+ M + P + + L R + +L+ +I
Sbjct: 320 LVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEI 379
Query: 179 -------------------------------------LKFDLIEDAFSLNILLNYICKSX 201
L ++L+ F NILL+ K
Sbjct: 380 SLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF--NILLSAASKRG 437
Query: 202 XXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYN 261
M +GL P V+ K T A++++ M+ E+P + Y
Sbjct: 438 IWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYG 497
Query: 262 SFINGLCKMASTDVAKNLVDELRK----RKLLDATTFNTLISGYSNSGQIDEAFGLTTEM 317
+ ++ L K D A + + + K L TT ++++G +D L EM
Sbjct: 498 ALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDT---LLKEM 554
Query: 318 KSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHP 377
S G+ + VT+N +I+ +NG A E M + + P+ ITY LI P
Sbjct: 555 ASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKP 614
Query: 378 EEVIALHDYMILKGVIPDQKTYDAIV 403
LH +G+ K YDA+V
Sbjct: 615 RLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 174/409 (42%), Gaps = 41/409 (10%)
Query: 14 VLLDGACKTGSLDLALKV---MKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVL 70
++ G K L A+ V +K+ +G + PN YNS++ G AE++L
Sbjct: 151 AMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAM---RGFGEAEKIL 207
Query: 71 GDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRH 130
DM + G P++ TY TL+ Y G ++L + D E+G PN + Y++ L +YR
Sbjct: 208 KDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALL-VYRR 266
Query: 131 GDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHN-------QILKFDL 183
ME+ L ++ ++Y+ + + + + E +KL N Q+++ L
Sbjct: 267 --MEDGMGALEFFVELR---EKYAKREIGNDVGYD-WEFEFVKLENFIGRICYQVMRRWL 320
Query: 184 IEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALR 243
++D +L + +M + G+ P +I + +
Sbjct: 321 VKDDNWTTRVLKLL-------------NAMDSAGVRPSREEHERLIWACTREEHYIVGKE 367
Query: 244 LYNGMIKMDEQPNLTIYNSFINGLCK----MASTDVAKNLVDELRKRKLLD----ATTFN 295
LY + + + +L++ N I + K A+ ++ ++L+DE + L + FN
Sbjct: 368 LYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFN 427
Query: 296 TLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQ 355
L+S S G L +M+ GL R +N ++ K A ++ K M+
Sbjct: 428 ILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDN 487
Query: 356 GIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPDQKTYDAIVT 404
G +P I+Y L++ K +E + ++MI G+ P+ Y + +
Sbjct: 488 GEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 109/269 (40%), Gaps = 25/269 (9%)
Query: 66 AEEVLGDMVKAGFEPSVRTYATLID------------GYARWGSLEESLRLCDEMVERGL 113
A E+ D++ G EP+ +Y ++ G RWG +RL ++M ++GL
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWG-----VRLLNKMEDKGL 454
Query: 114 FPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALK 173
P +N++L + + A ++ M+D P SY L L + EA +
Sbjct: 455 KPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFR 514
Query: 174 LHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNC 233
+ N ++K + + ++ + + + M ++G+ P V T VI G
Sbjct: 515 VWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCA 574
Query: 234 KLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKL-LDAT 292
+ G + A ++ M + +PN Y I L A +A L + + L L +
Sbjct: 575 RNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSK 634
Query: 293 TFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
++ ++ E +G T ++ LG
Sbjct: 635 PYDAVVKS-------AETYGATIDLNLLG 656
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Query: 14 VLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDM 73
+LL A K G ++++ KM + P +N+++ K A ++ M
Sbjct: 428 ILLSAASKRGIWRWGVRLLNKME---DKGLKPQRRHWNAVLVACSKASETTAAIQIFKAM 484
Query: 74 VKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDM 133
V G +P+V +Y L+ + +E+ R+ + M++ G+ PN+ Y ++ L
Sbjct: 485 VDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKF 544
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNG 166
+L +M K I P ++ + G RNG
Sbjct: 545 NLLDTLLKEMASKGIEPSVVTFNAVISGCARNG 577
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 164/356 (46%), Gaps = 20/356 (5%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M N V P SV+ +++ K L + V + + EPS+R L++ YA G
Sbjct: 227 MERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGE 286
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++ ++R+ M R +++ + SI+ G++ K+ D+ D+ S+ I
Sbjct: 287 MDIAVRIFRSMKAR----DVISWTSIVKGYVERGNL----KLARTYFDQMPVRDRISWTI 338
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRG 217
+ +G R G E+L++ ++ +I D F++ +L C + I +
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLT-ACAHLGSLEIGEWIKTYIDKN 397
Query: 218 -LPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
+ DV +ID K G +EKA ++++ MD++ T + + + GL A
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFH---DMDQRDKFT-WTAMVVGLANNGQGQEA 453
Query: 277 KNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKS-LGLSANRVTYNTLIN 334
+ +++ + D T+ ++S ++SG +D+A +M+S + + V Y +++
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 335 LLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
+L + G +EA E+++ M M P+ I + L+ ++ H+ E + L IL+
Sbjct: 514 MLGRAGLVKEAYEILRKMPMN---PNSIVWGALLGA-SRLHNDEPMAELAAKKILE 565
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 115 PNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRN-GYLTEALK 173
P++VV+N+++ + E ++ +M+ + + PD +++ L GL R+ G L K
Sbjct: 97 PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 174 LHNQILKFDL-------------------------------IEDAFSLNILLNYICKSXX 202
LH ++KF L ED FS N++++ +
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE 216
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
M + P T V+ K+ + + R++ + + +P+L + N+
Sbjct: 217 YEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENA 276
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGL 322
+N D+A + ++ R D ++ +++ GY G + A +M
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKAR---DVISWTSIVKGYVERGNLKLARTYFDQMP---- 329
Query: 323 SANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
+R+++ +I+ + GC E+ E+ + M G+ PD T +++T
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLT 376
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 116/294 (39%), Gaps = 60/294 (20%)
Query: 12 EWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLG 71
E L++ G +D+A+++ + M + +S+ SI+ G+ ++G L LA
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKAR-------DVISWTSIVKGYVERGNLKLARTYFD 326
Query: 72 DMVKAGFEPSVR---TYATLIDGYARWGSLEESLRLCDEMVERGLFP------------- 115
M VR ++ +IDGY R G ESL + EM G+ P
Sbjct: 327 QM-------PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 116 ----------------------NIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQY 153
++VV N+++ ++ G E+A KV DM + D++
Sbjct: 380 HLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR----DKF 435
Query: 154 SYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSM 213
++ + GL NG EA+K+ Q+ + D + +L+ S M
Sbjct: 436 TWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM 495
Query: 214 IT-RGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFING 266
+ + P + ++D + G ++A Y + KM PN ++ + +
Sbjct: 496 RSDHRIEPSLVHYGCMVDMLGRAGLVKEA---YEILRKMPMNPNSIVWGALLGA 546
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/428 (19%), Positives = 167/428 (39%), Gaps = 90/428 (21%)
Query: 10 IKEWVLLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEV 69
IK W +D C + L L ++K+ V P+S ++ ++NG + GG L +
Sbjct: 106 IKGWSKVD--CDGEGVRLYLNMLKE-------GVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 70 LG----------------------------DMVKAGFE----PSVRTYATLIDGYARWGS 97
L DM + F+ V ++ +I GY R
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKE 216
Query: 98 LEESLRLCDEMVERGLF------------------------------------PNIVVYN 121
EES+ L EM ER L P++ + N
Sbjct: 217 YEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 122 SILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKF 181
+++ G+M+ A ++ M + D S+ + +G G L A +Q+
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQM--- 328
Query: 182 DLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKA 241
+ D S I+++ ++ M + G+ PD +T +V+ LG+ E
Sbjct: 329 -PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 242 LRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLDATTFNTLISGY 301
+ + K + ++ + N+ I+ K ++ A+ + ++ +R D T+ ++ G
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR---DKFTWTAMVVGL 444
Query: 302 SNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELM-KMMIMQGIRPD 360
+N+GQ EA + +M+ + + + +TY +++ +G ++A++ KM I P
Sbjct: 445 ANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 361 CITYTTLI 368
+ Y ++
Sbjct: 505 LVHYGCMV 512
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 29/329 (8%)
Query: 93 ARWGSLEESLRLCDEMVERGLFPNIVVYNS---ILYWLYRHGDMEEASKVLSDMIDKHIC 149
AR +++ L E+ R +PN++ + S +L + + G EE + M +K I
Sbjct: 114 ARMRYFDQAWALMAEV--RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKM-EKEIF 170
Query: 150 PDQY---SYAILTEGLCRNGYLTEAL----KLHNQILKFDLIEDAFSLNILLNYICKSXX 202
++ + IL C + EA KLH+ +F+ D ++NILL ++
Sbjct: 171 RKKFGVDEFNILLRAFCTEREMKEARSIFEKLHS---RFN--PDVKTMNILLLGFKEAGD 225
Query: 203 XXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNS 262
M+ RG P+ T IDG CK N +ALRL+ M ++D + I +
Sbjct: 226 VTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTT 285
Query: 263 FINGLCKMASTDVAKNLVDELRKRKLL-DATTFNTLISGYSNSGQIDEAFGLTTEMKSLG 321
I+G + A+ L DE+ KR L D +N L+S G + A + EM+ G
Sbjct: 286 LIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKG 345
Query: 322 LSANRVTYNTLINLLCK------NGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKH 375
+ + VT++++ + K NG E +++ + + + P T L+ F
Sbjct: 346 IEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKE----RSLVPKTPTIVMLMKLFCHNG 401
Query: 376 HPEEVIALHDYMILKGVIPDQKTYDAIVT 404
+ L YM+ KG P + + T
Sbjct: 402 EVNLGLDLWKYMLEKGYCPHGHALELLTT 430
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 70/128 (54%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M PNSV+Y I+GFCKK A + DM + F+ +V+ TLI G +
Sbjct: 236 MVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARN 295
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
++ +L DE+ +RGL P+ YN+++ L + GD+ A KV+ +M +K I PD ++
Sbjct: 296 KIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHS 355
Query: 158 LTEGLCRN 165
+ G+ ++
Sbjct: 356 MFIGMMKS 363
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 144/356 (40%), Gaps = 17/356 (4%)
Query: 24 SLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGD-MVKAGFEPSV 82
S+ L K+ N++ PN VSYN IIN C +G + A EV + A F PS
Sbjct: 199 SISLFQYFFKQSNIV------PNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSS 252
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
TY L G + G + ++ L EM+ +G + VYN+++ GD ++A + +
Sbjct: 253 VTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDE 312
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXX 202
+ K D A E G EA++ + +L + N+LL K
Sbjct: 313 LKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGK 372
Query: 203 XXXXXXXXGSMITRGLPPDVY-----TKATVIDGNCKLGNTEKALRLYNGM-IKMDEQPN 256
M+ PP++ T +++ K+G +A+ + + K+ +P
Sbjct: 373 KDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPF 432
Query: 257 LTIYNSFIN---GLCKMASTDVAKNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFG 312
+ Y + N C+ A+ E R L DA + +I Y + +ID+A
Sbjct: 433 VMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVK 492
Query: 313 LTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRPDCITYTTLI 368
+ M + L + L KNG E+ E++ M + +PD Y ++
Sbjct: 493 MLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVV 548
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 155/381 (40%), Gaps = 22/381 (5%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
+++ C G++D AL+V + +++ P+SV+Y + G + G + A +L +M+
Sbjct: 222 IINAHCDEGNVDEALEVYR--HILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREML 279
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVER-GLFPNIVVYNSILYWLYRHGDM 133
G Y LI GY G ++++ DE+ + ++ IV + YW + G+
Sbjct: 280 SKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYW-FEKGND 338
Query: 134 EEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLN-- 191
+EA + ++DK + +L E + G EA L N++L + S+N
Sbjct: 339 KEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSD 398
Query: 192 ---ILLNYICK----SXXXXXXXXXXGSMITRGLPPDVYTKATVIDGNCKLGNTEKALRL 244
I++N K S + ++ D ++ C+ G +A R
Sbjct: 399 TVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERF 458
Query: 245 YNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDE-----LRKRKLLDATTFNTLIS 299
+ + + + + I+ K D A ++D LR A F LI
Sbjct: 459 FAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIK 518
Query: 300 GYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKNGCDEEAKELMKMMIMQGIRP 359
+G++ E+ + T+M + Y+ ++ LC ++AK+++ MI +
Sbjct: 519 ----NGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGV 574
Query: 360 DCITYTTLITHFNKKHHPEEV 380
+ +I F K EE+
Sbjct: 575 TTVLREFIIEVFEKAGRREEI 595
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDE-QPNLTIYNSFINGLCKMASTDVAKN 278
P+V + +I+ +C GN ++AL +Y ++ P+ Y GL + A +
Sbjct: 214 PNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAAS 273
Query: 279 LVDE-LRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLC 337
L+ E L K + D+T +N LI GY + G D+A E+KS + + T +
Sbjct: 274 LLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWF 333
Query: 338 KNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
+ G D+EA E + ++ + R T L+ F K +E AL + M+ P+
Sbjct: 334 EKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPN 391
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 149/331 (45%), Gaps = 22/331 (6%)
Query: 45 PNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE-ESLR 103
PN+ +Y++I++ L +++ +K GFE S L+D Y + + E E+ R
Sbjct: 323 PNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR 382
Query: 104 LCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLC 163
+ MV PN+V + +++ L HG +++ +L +M+ + + P+ + + +
Sbjct: 383 VFGAMVS----PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Query: 164 RNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVY 223
+ ++ L++H +L+ + + N L++ S SM R D
Sbjct: 439 KLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNI 494
Query: 224 TKATVIDGNCKLGNTEKALRLYNGM----IKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
T +++ +LG E AL + N M I+MD+ FI+ + + + K+L
Sbjct: 495 TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLS----LPGFISASANLGALETGKHL 550
Query: 280 VDELRKRKLLDATT-FNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCK 338
K A + N+L+ YS G +++A + E+ + + V++N L++ L
Sbjct: 551 HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA----TPDVVSWNGLVSGLAS 606
Query: 339 NGCDEEAKELMKMMIMQGIRPDCITYTTLIT 369
NG A + M M+ PD +T+ L++
Sbjct: 607 NGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 152/369 (41%), Gaps = 50/369 (13%)
Query: 38 MTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGS 97
M V PN ++ ++ G GL + + +++ G +V +L+D Y+++
Sbjct: 216 MVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK 274
Query: 98 LEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAI 157
+E+++R+ + E+ +F ++ S++ R+ +EA +M + P+ ++Y+
Sbjct: 275 MEDAVRVLNSSGEQDVF----LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSA 330
Query: 158 LTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLN-YICKSXXXXXXXXXXGSMITR 216
+ L ++H+Q +K + N L++ Y+ S G+M++
Sbjct: 331 ILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVS- 389
Query: 217 GLPPDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVA 276
P+V + T+I G G + L M+K + +PN+ + + K+
Sbjct: 390 ---PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 277 KNLVDELRKRKL-LDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
+ L +R + + N+L+ Y++S ++D A+ + MK
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK----------------- 489
Query: 336 LCKNGCDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILKGVIPD 395
R D ITYT+L+T FN+ E +++ +YM G+ D
Sbjct: 490 ----------------------RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMD 527
Query: 396 QKTYDAIVT 404
Q + ++
Sbjct: 528 QLSLPGFIS 536
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/285 (18%), Positives = 127/285 (44%), Gaps = 12/285 (4%)
Query: 51 NSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVE 110
N++++ + K G+ A ++ +M +V + +I + + +L L +EM+
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMS----HRTVFAWTVMISAFTKSQEFASALSLFEEMMA 117
Query: 111 RGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTE 170
G PN ++S++ D+ +V +I + + L++ + G E
Sbjct: 118 SGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKE 177
Query: 171 ALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLPPDVYTKATVID 230
A +L + + D I S ++++ + + M+ G+PP+ +T ++
Sbjct: 178 ACELFSSLQNADTI----SWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG 233
Query: 231 GNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNLVDELRKRKLLD 290
+ LG E +++ +I N+ + S ++ + + + A +++ ++ D
Sbjct: 234 ASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ---D 289
Query: 291 ATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINL 335
+ +++SG+ + + EA G EM+SLGL N TY+ +++L
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSL 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 23 GSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSV 82
G ++AL V+ N M G+ + + +S I+ G L + + VK+GF +
Sbjct: 507 GKHEMALSVI---NYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA 563
Query: 83 RTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSD 142
+L+D Y++ GSLE++ ++ +E+ P++V +N ++ L +G + A +
Sbjct: 564 SVLNSLVDMYSKCGSLEDAKKVFEEIAT----PDVVSWNGLVSGLASNGFISSALSAFEE 619
Query: 143 MIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILK 180
M K PD ++ IL C NG LT+ + Q++K
Sbjct: 620 MRMKETEPDSVTFLILLSA-CSNGRLTDLGLEYFQVMK 656
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 140/353 (39%), Gaps = 45/353 (12%)
Query: 40 GNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMVKAGFEPSVRTYATLIDGYARWGSLE 99
G V PN VS+ ++I G G + +L +MVK EP+V T + ++ ++ +
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVR 444
Query: 100 ESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDMEEASKVLSDMIDKHICPDQYSYAILT 159
L + ++ R + +VV NS++ ++ A V+ M + D +Y
Sbjct: 445 RVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITY---- 496
Query: 160 EGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILLNYICKSXXXXXXXXXXGSMITRGLP 219
T + N++ K ++ A S ++NY M G+
Sbjct: 497 ---------TSLVTRFNELGKHEM---ALS---VINY----------------MYGDGIR 525
Query: 220 PDVYTKATVIDGNCKLGNTEKALRLYNGMIKMDEQPNLTIYNSFINGLCKMASTDVAKNL 279
D + I + LG E L+ +K ++ NS ++ K S + AK +
Sbjct: 526 MDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV 585
Query: 280 VDELRKRKLLDATTFNTLISGYSNSGQIDEAFGLTTEMKSLGLSANRVTYNTLINLLCKN 339
+E+ D ++N L+SG +++G I A EM+ + VT+ L++ C N
Sbjct: 586 FEEIATP---DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS-ACSN 641
Query: 340 G--CDEEAKELMKMMIMQGIRPDCITYTTLITHFNKKHHPEEVIALHDYMILK 390
G D + M + I P Y L+ + EE + + M LK
Sbjct: 642 GRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLK 694
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 11/181 (6%)
Query: 15 LLDGACKTGSLDLALKVMKKMNLMTGNSVWPNSVSYNSIINGFCKKGGLLLAEEVLGDMV 74
L+D + +D A V++ M ++++Y S++ F + G +A V+ M
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRR-------DNITYTSLVTRFNELGKHEMALSVINYMY 520
Query: 75 KAGFEPSVRTYATLIDGYARWGSLEESLRLCDEMVERGLFPNIVVYNSILYWLYRHGDME 134
G + I A G+LE L V+ G V NS++ + G +E
Sbjct: 521 GDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLE 580
Query: 135 EASKVLSDMIDKHICPDQYSYAILTEGLCRNGYLTEALKLHNQILKFDLIEDAFSLNILL 194
+A KV ++ PD S+ L GL NG+++ AL ++ + D+ + ILL
Sbjct: 581 DAKKVFEEI----ATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILL 636
Query: 195 N 195
+
Sbjct: 637 S 637