Miyakogusa Predicted Gene

Lj4g3v0151560.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0151560.2 Non Chatacterized Hit- tr|G7IG28|G7IG28_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,29.53,0.00000000000002,seg,NULL,CUFF.46549.2
         (531 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G37190.1 | Symbols: CIP4 | COP1-interacting protein 4 | chr5:...    79   1e-14
AT4G00930.1 | Symbols: CIP4.1 | COP1-interacting protein 4.1 | c...    76   6e-14
AT4G00920.1 | Symbols:  | COP1-interacting protein-related | chr...    70   4e-12
AT1G55860.1 | Symbols: UPL1 | ubiquitin-protein ligase 1 | chr1:...    65   1e-10
AT2G01800.1 | Symbols:  | COP1-interacting protein-related | chr...    64   3e-10
AT4G00580.1 | Symbols:  | COP1-interacting protein-related | chr...    64   3e-10
AT2G01800.3 | Symbols:  | COP1-interacting protein-related | chr...    64   3e-10
AT2G02770.1 | Symbols:  | 4'-phosphopantetheinyl transferase sup...    63   5e-10
AT2G01800.2 | Symbols:  | COP1-interacting protein-related | chr...    63   6e-10
AT1G30060.1 | Symbols:  | COP1-interacting protein-related | chr...    62   1e-09

>AT5G37190.1 | Symbols: CIP4 | COP1-interacting protein 4 |
          chr5:14723362-14726694 REVERSE LENGTH=876
          Length = 876

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 17 FIDTNLDTHLAVDVFDHDTASDLKKRIESEHRSCFPEFGHIHVHGIKVKRKGYSYKIADS 76
          F++TNLDT L + V   +  SD K R+  EH+  FPE G I +  +KVKR+   Y  +DS
Sbjct: 16 FVETNLDTRLILHVHKDEIISDFKDRLLKEHKQVFPEIGEIQISALKVKRRRKFYHFSDS 75

Query: 77 MCVRNAFSGFKKSWYISV 94
          + V  AF G  ++W++ +
Sbjct: 76 LHVCKAFDGISRNWFMYI 93


>AT4G00930.1 | Symbols: CIP4.1 | COP1-interacting protein 4.1 |
          chr4:396558-400734 FORWARD LENGTH=1133
          Length = 1133

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 47/78 (60%)

Query: 17 FIDTNLDTHLAVDVFDHDTASDLKKRIESEHRSCFPEFGHIHVHGIKVKRKGYSYKIADS 76
          F++TNLDT LA+ V   +  SD K ++  EH+  FPE G I++  +KVKR+   Y  ++S
Sbjct: 16 FVETNLDTRLALPVHKDEIISDFKDKVLKEHKQVFPEIGEINISAMKVKRRREFYHFSES 75

Query: 77 MCVRNAFSGFKKSWYISV 94
          + V  AF G    W++ +
Sbjct: 76 LNVCKAFDGISTDWFMYI 93


>AT4G00920.1 | Symbols:  | COP1-interacting protein-related |
           chr4:393767-395382 FORWARD LENGTH=314
          Length = 314

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 17  FIDTNLDTHLAVDVFDHDTASDLKKRIESEHRSCFPEFGHIHVHGIKVKRKGYSYKIADS 76
           F++TNLDT L V +   D  S  K++I  EH +CFP FG+I +  +KVK  G  Y + DS
Sbjct: 16  FVETNLDTRLGVLMERDDIVSTFKEKICKEHETCFPSFGNITISALKVKCGGQFYHLVDS 75

Query: 77  MCVRNAFSGFKKSWYISV-QVSALGDQL---IPHGSPNQVVCHGVAENALVCHADNSASK 132
           + +  AF   +    + V +V   G  L    P  +PN +      E   +   D +  +
Sbjct: 76  LILNTAFPSKETFLVVDVLRVEEKGKMLTGETPLSNPNLL----ERETKTIKDVDKTKKR 131

Query: 133 RVSSLDNLQLLQSENKL---DEGGGIHNVRP 160
           ++ SLD+ +  +S  KL   D+  G   V P
Sbjct: 132 KLKSLDSAK--RSRKKLSLVDQSSGKGVVEP 160


>AT1G55860.1 | Symbols: UPL1 | ubiquitin-protein ligase 1 |
          chr1:20879900-20895393 REVERSE LENGTH=3930
          Length = 3930

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%)

Query: 17 FIDTNLDTHLAVDVFDHDTASDLKKRIESEHRSCFPEFGHIHVHGIKVKRKGYSYKIADS 76
          F +T+L T + + V    TA+D K+++E  H SC    G I VHG+ VKRK   Y + +S
Sbjct: 10 FAETSLGTRIVMAVPLDITAADFKRKLEKTHASCLSSVGEIEVHGLMVKRKSRFYHLVES 69

Query: 77 MCVRNAFSGFKKSWYI 92
          + +R  F   +K W+I
Sbjct: 70 VPIRYIFLDNQKPWFI 85


>AT2G01800.1 | Symbols:  | COP1-interacting protein-related |
          chr2:343766-345254 REVERSE LENGTH=304
          Length = 304

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 17 FIDTNLDTHLAVDVFDHDTASDLKKRIESEHRSCFPEFGHIHVHGIKVKRKGYSYKIADS 76
          F+ T++DT LA+ +   D+    K++I  EH  CFP  G+I +  +KV   G  Y ++D 
Sbjct: 11 FVKTSIDTRLALLLDSDDSVYAFKEKICKEHEQCFPSVGNITISALKVNLGGNDYHLSDC 70

Query: 77 MCVRNAFSGFK-KSWYISVQV 96
            ++ A  G + K W++SV +
Sbjct: 71 TILKTALQGLRNKDWFLSVDL 91


>AT4G00580.1 | Symbols:  | COP1-interacting protein-related |
          chr4:248713-250258 FORWARD LENGTH=317
          Length = 317

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 17 FIDTNLDTHLAVDVFDHDTASDLKKRIESEHRSCFPEFGHIHVHGIKVKRKGYSYKIADS 76
          F+ T++DT L + +  HD+ S  K +   EH  CFP  G+I V  +KV   G  Y ++DS
Sbjct: 10 FVKTSIDTRLGLLLDSHDSVSSFKDKFCKEHELCFPSVGNITVSALKVNVSGNDYHLSDS 69

Query: 77 MCVRNAFSGFK-KSWYISVQV 96
          M ++ A  G   + +++SV +
Sbjct: 70 MILKKALQGLSNEDFFLSVDL 90


>AT2G01800.3 | Symbols:  | COP1-interacting protein-related |
          chr2:343766-345254 REVERSE LENGTH=281
          Length = 281

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 17 FIDTNLDTHLAVDVFDHDTASDLKKRIESEHRSCFPEFGHIHVHGIKVKRKGYSYKIADS 76
          F+ T++DT LA+ +   D+    K++I  EH  CFP  G+I +  +KV   G  Y ++D 
Sbjct: 11 FVKTSIDTRLALLLDSDDSVYAFKEKICKEHEQCFPSVGNITISALKVNLGGNDYHLSDC 70

Query: 77 MCVRNAFSGFK-KSWYISVQV 96
            ++ A  G + K W++SV +
Sbjct: 71 TILKTALQGLRNKDWFLSVDL 91


>AT2G02770.1 | Symbols:  | 4'-phosphopantetheinyl transferase
           superfamily | chr2:775657-779786 REVERSE LENGTH=661
          Length = 661

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 11/174 (6%)

Query: 17  FIDTNLDTHLAVDVFDHDTASDLKKRIESEHRSCFPEFGHIHVHGIKVKRKGYSYKIADS 76
           F+ TN+DT L + +   DT S  K++I  EH  CFP FG+I +  +KV   G  Y + DS
Sbjct: 10  FVTTNMDTRLGLLMDKDDTVSTFKEKICKEHEQCFPSFGNITISALKVNCCGQLYHLVDS 69

Query: 77  MCVRNAFSGFKKSWYISV-QVSALGDQL---IPHGSPNQVVCHG---VAENALVCHA--D 127
           + +  AF   +   ++ V +V   G  L    P  +P+ +         + A V  A  D
Sbjct: 70  LTLNTAFQSNESFLFVDVLRVEEKGKMLTGETPLSNPSLLERETNDLTIKEAPVTQAGDD 129

Query: 128 NSASKRVSSLDNLQLLQSENKL-DEGGGIHNVRPCVSEQTGEGDVKNLEKSAGN 180
            +  +++ SLD+ +    +  L D+  G   V       TG+ D++  EKSA  
Sbjct: 130 KTKKRKLKSLDSTKRSHKKRSLGDQSSGKGEVESLAMSPTGK-DLEKGEKSAAT 182


>AT2G01800.2 | Symbols:  | COP1-interacting protein-related |
          chr2:343766-345254 REVERSE LENGTH=249
          Length = 249

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 17 FIDTNLDTHLAVDVFDHDTASDLKKRIESEHRSCFPEFGHIHVHGIKVKRKGYSYKIADS 76
          F+ T++DT LA+ +   D+    K++I  EH  CFP  G+I +  +KV   G  Y ++D 
Sbjct: 11 FVKTSIDTRLALLLDSDDSVYAFKEKICKEHEQCFPSVGNITISALKVNLGGNDYHLSDC 70

Query: 77 MCVRNAFSGFK-KSWYISVQV 96
            ++ A  G + K W++SV +
Sbjct: 71 TILKTALQGLRNKDWFLSVDL 91


>AT1G30060.1 | Symbols:  | COP1-interacting protein-related |
          chr1:10545087-10545906 REVERSE LENGTH=176
          Length = 176

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 17 FIDTNLDTHLAVDVFDHDTASDLKKRIESEHRSCFPEFGHIHVHGIKVKRKGYSYKIADS 76
          F+ T++DT + + +   D+ S  K +I  EH  CFP  G+I +  +KV   G  Y ++D 
Sbjct: 11 FVKTSIDTRMGLLLDSDDSVSAFKDKICKEHEQCFPSVGNITISALKVNLGGNDYHLSDC 70

Query: 77 MCVRNAFSGFK-KSWYISVQV 96
          M ++ A  G   K W++SV +
Sbjct: 71 MILKTALQGLSNKDWFLSVHL 91