Miyakogusa Predicted Gene
- Lj4g3v0149480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0149480.1 Non Chatacterized Hit- tr|I1MR49|I1MR49_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,82.75,0,ACT-like,NULL; PDT,Prephenate dehydratase; ACT,ACT
domain; no description,NULL; seg,NULL; PREPHENATE,CUFF.46543.1
(401 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G11790.1 | Symbols: ADT1 | arogenate dehydratase 1 | chr1:398... 494 e-140
AT1G08250.1 | Symbols: ADT6 | arogenate dehydratase 6 | chr1:258... 389 e-108
AT2G27820.1 | Symbols: PD1, ADT3 | prephenate dehydratase 1 | ch... 381 e-106
AT1G11790.2 | Symbols: ADT1 | arogenate dehydratase 1 | chr1:398... 381 e-106
AT3G07630.2 | Symbols: ADT2 | arogenate dehydratase 2 | chr3:243... 381 e-106
AT3G07630.1 | Symbols: ADT2 | arogenate dehydratase 2 | chr3:243... 381 e-106
AT5G22630.1 | Symbols: ADT5 | arogenate dehydratase 5 | chr5:752... 368 e-102
AT3G44720.1 | Symbols: ADT4 | arogenate dehydratase 4 | chr3:162... 360 e-100
>AT1G11790.1 | Symbols: ADT1 | arogenate dehydratase 1 |
chr1:3981476-3984962 FORWARD LENGTH=392
Length = 392
Score = 494 bits (1271), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/401 (62%), Positives = 296/401 (73%), Gaps = 12/401 (2%)
Query: 2 MALKGVSTWGCSSSKPH--PQLGVVSSHSGHIGNNLRYDLHKCCKWECCCLGVLAQRAIT 59
MAL+ W C + H P +G+ + + C WEC +QRA+T
Sbjct: 1 MALRCFPIWVCPQTTHHRSPLMGLAEFDAD--------KRRRFCLWECSSSA--SQRAVT 50
Query: 60 PVEDEKSSSSPLVESPGAADEPLQNESKGFHKDMNLLPKPLTAIDISSSPRDRSKVRVAY 119
+E E S L +S + +S FH+D+++LPKPLTA + SS D SKVR+++
Sbjct: 51 AIEGEIPFSRELKKSSDELGLTQETQSLSFHRDLSMLPKPLTANSLYSSDGDDSKVRISF 110
Query: 120 QGLPGAFSEDAALKAYPECETVPCDDFETAFKAVELWLVDKAVLPIENSVDGSIHRNYDL 179
QG+PGA+SE AALKA+P CETVPC+ FE AF+AVELWLVDKAVLPIENSV GSIHRNYDL
Sbjct: 111 QGIPGAYSETAALKAFPNCETVPCEQFEAAFQAVELWLVDKAVLPIENSVGGSIHRNYDL 170
Query: 180 LLRHRLHIVGEVQLRVNHCLLGLPGVRKEELKSVVSHPQALAQCEVMLNDLGAVRISXXX 239
LLRHRLHIV EV L VNHCLLG+PGV+KE++K V+SHPQAL QC LN+LG RIS
Sbjct: 171 LLRHRLHIVQEVHLPVNHCLLGVPGVKKEDIKCVLSHPQALDQCVNSLNNLGIQRISAKD 230
Query: 240 XXXXXXXXXXXXXRDTGAIASFRAANIYGLDILAERIQDDDENITRFLVLARDPIIPGTD 299
D GAIAS RAANIYGLDILAE IQDD N+TRFL+LAR+P+IP TD
Sbjct: 231 TATAAQTVSSSGKIDVGAIASVRAANIYGLDILAENIQDDVNNVTRFLILAREPMIPRTD 290
Query: 300 KPHKTSIVFSLEEGPGVLFKALAVFSMRNINLSKIESRPQKQRPLRVVDDSNEGSAKYFD 359
+P+KTSIVFSLEEGPGVLFKALAVF++R+INLSKIESRPQ++RPLRVVD SN GSAKYFD
Sbjct: 291 RPYKTSIVFSLEEGPGVLFKALAVFALRSINLSKIESRPQRRRPLRVVDGSNNGSAKYFD 350
Query: 360 YLFYIDFEASMAEPRAQYALGQLQEFARFLRVLGCYPVDTV 400
YLFYIDFEASMA+ RAQ+ALG LQEFA F+R+LGCYP+D V
Sbjct: 351 YLFYIDFEASMADTRAQHALGHLQEFASFIRILGCYPMDLV 391
>AT1G08250.1 | Symbols: ADT6 | arogenate dehydratase 6 |
chr1:2588994-2590235 REVERSE LENGTH=413
Length = 413
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/376 (55%), Positives = 256/376 (68%), Gaps = 25/376 (6%)
Query: 44 KWECCCLGVLAQRAITPVEDEKSSSSPLVESPGAADE-PLQNESKGFHKDMNLLP----- 97
+W+ C +L + I+ E+S S P+ G D N + MNL+P
Sbjct: 30 EWQSSC-AILTSKVIS---QEESESLPVPPVSGGVDHLNGHNSAAARVPGMNLVPIEKSD 85
Query: 98 -------------KPLTAIDISSSPRDRSKVRVAYQGLPGAFSEDAALKAYPECETVPCD 144
KPL+ D+S +P S +RVAYQG+PGA+SE AA KAYP C+ +PCD
Sbjct: 86 SNPLVPQHRHNPLKPLSMTDLSPAPMHGSNLRVAYQGVPGAYSEAAAGKAYPNCQAIPCD 145
Query: 145 DFETAFKAVELWLVDKAVLPIENSVDGSIHRNYDLLLRHRLHIVGEVQLRVNHCLLGLPG 204
FE AF+AVELW+ D+AVLP+ENS+ GSIHRNYDLLLRHRLHIVGEVQL V+HCLL LPG
Sbjct: 146 QFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPG 205
Query: 205 VRKEELKSVVSHPQALAQCEVMLNDLG--AVRISXXXXXXXXXXXXXXXXRDTGAIASFR 262
VRKE L V+SHPQ LAQCE L LG R + RDT AIAS R
Sbjct: 206 VRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIASNNLRDTAAIASAR 265
Query: 263 AANIYGLDILAERIQDDDENITRFLVLARDPIIPGTDKPHKTSIVFSLEEGPGVLFKALA 322
AA IYGL+IL + IQDD N+TRF++LAR+PIIP TD+P KTSIVF+ E+G VLFK L+
Sbjct: 266 AAEIYGLEILEDGIQDDVSNVTRFVMLAREPIIPRTDRPFKTSIVFAHEKGTSVLFKVLS 325
Query: 323 VFSMRNINLSKIESRPQKQRPLRVVDDSNEGSAKYFDYLFYIDFEASMAEPRAQYALGQL 382
F+ R+I+L+KIESRP RP+RVVDD+N G+AK+F+Y+FY+DFEASMAE RAQ AL ++
Sbjct: 326 AFAFRDISLTKIESRPNHNRPIRVVDDANVGTAKHFEYMFYVDFEASMAEARAQNALAEV 385
Query: 383 QEFARFLRVLGCYPVD 398
QEF FLRVLG YP+D
Sbjct: 386 QEFTSFLRVLGSYPMD 401
>AT2G27820.1 | Symbols: PD1, ADT3 | prephenate dehydratase 1 |
chr2:11856808-11858082 FORWARD LENGTH=424
Length = 424
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/319 (60%), Positives = 237/319 (74%), Gaps = 12/319 (3%)
Query: 92 DMNLLP----------KPLTAIDISSSPRDRSKVRVAYQGLPGAFSEDAALKAYPECETV 141
D+NL+P KPL+ D+S +P S +RVAYQG+PGA+SE AA KAYP C+ +
Sbjct: 88 DLNLVPFNNNQSIQSKKPLSISDLSPAPMHGSNLRVAYQGVPGAYSEAAAGKAYPNCQAI 147
Query: 142 PCDDFETAFKAVELWLVDKAVLPIENSVDGSIHRNYDLLLRHRLHIVGEVQLRVNHCLLG 201
PCD FE AF+AVELW+ D+AVLP+ENS+ GSIHRNYDLLLRHRLHIVGEVQL V+HCL+
Sbjct: 148 PCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLIA 207
Query: 202 LPGVRKEELKSVVSHPQALAQCEVMLNDLG--AVRISXXXXXXXXXXXXXXXXRDTGAIA 259
LPGVRKE L V+SHPQ LAQCE L LG R + RDT AIA
Sbjct: 208 LPGVRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIAANNIRDTAAIA 267
Query: 260 SFRAANIYGLDILAERIQDDDENITRFLVLARDPIIPGTDKPHKTSIVFSLEEGPGVLFK 319
S RAA IYGL+IL + IQDD N+TRF++LAR+PIIP TD+P KTSIVF+ E+G VLFK
Sbjct: 268 SARAAEIYGLEILEDGIQDDASNVTRFVMLAREPIIPRTDRPFKTSIVFAHEKGTCVLFK 327
Query: 320 ALAVFSMRNINLSKIESRPQKQRPLRVVDDSNEGSAKYFDYLFYIDFEASMAEPRAQYAL 379
L+ F+ RNI+L+KIESRP P+R+VD++N G+AK+F+Y+FYIDFEASMAE RAQ AL
Sbjct: 328 VLSAFAFRNISLTKIESRPNHNVPIRLVDEANVGTAKHFEYMFYIDFEASMAESRAQNAL 387
Query: 380 GQLQEFARFLRVLGCYPVD 398
++QEF FLRVLG YP+D
Sbjct: 388 SEVQEFTSFLRVLGSYPMD 406
>AT1G11790.2 | Symbols: ADT1 | arogenate dehydratase 1 |
chr1:3981476-3984562 FORWARD LENGTH=341
Length = 341
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/341 (58%), Positives = 239/341 (70%), Gaps = 18/341 (5%)
Query: 2 MALKGVSTWGCSSSKPH--PQLGVVSSHSGHIGNNLRYDLHK---CCKWECCCLGVLAQR 56
MAL+ W C + H P +G+ +D K C WEC +QR
Sbjct: 1 MALRCFPIWVCPQTTHHRSPLMGLA-----------EFDADKRRRFCLWECSSSA--SQR 47
Query: 57 AITPVEDEKSSSSPLVESPGAADEPLQNESKGFHKDMNLLPKPLTAIDISSSPRDRSKVR 116
A+T +E E S L +S + +S FH+D+++LPKPLTA + SS D SKVR
Sbjct: 48 AVTAIEGEIPFSRELKKSSDELGLTQETQSLSFHRDLSMLPKPLTANSLYSSDGDDSKVR 107
Query: 117 VAYQGLPGAFSEDAALKAYPECETVPCDDFETAFKAVELWLVDKAVLPIENSVDGSIHRN 176
+++QG+PGA+SE AALKA+P CETVPC+ FE AF+AVELWLVDKAVLPIENSV GSIHRN
Sbjct: 108 ISFQGIPGAYSETAALKAFPNCETVPCEQFEAAFQAVELWLVDKAVLPIENSVGGSIHRN 167
Query: 177 YDLLLRHRLHIVGEVQLRVNHCLLGLPGVRKEELKSVVSHPQALAQCEVMLNDLGAVRIS 236
YDLLLRHRLHIV EV L VNHCLLG+PGV+KE++K V+SHPQAL QC LN+LG RIS
Sbjct: 168 YDLLLRHRLHIVQEVHLPVNHCLLGVPGVKKEDIKCVLSHPQALDQCVNSLNNLGIQRIS 227
Query: 237 XXXXXXXXXXXXXXXXRDTGAIASFRAANIYGLDILAERIQDDDENITRFLVLARDPIIP 296
D GAIAS RAANIYGLDILAE IQDD N+TRFL+LAR+P+IP
Sbjct: 228 AKDTATAAQTVSSSGKIDVGAIASVRAANIYGLDILAENIQDDVNNVTRFLILAREPMIP 287
Query: 297 GTDKPHKTSIVFSLEEGPGVLFKALAVFSMRNINLSKIESR 337
TD+P+KTSIVFSLEEGPGVLFKALAVF++R+INLSK+ S+
Sbjct: 288 RTDRPYKTSIVFSLEEGPGVLFKALAVFALRSINLSKVSSK 328
>AT3G07630.2 | Symbols: ADT2 | arogenate dehydratase 2 |
chr3:2435457-2437530 FORWARD LENGTH=381
Length = 381
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/317 (62%), Positives = 238/317 (75%), Gaps = 5/317 (1%)
Query: 85 ESKGFHKDMNLLPKPLTAIDISSSPRDRSKVRVAYQGLPGAFSEDAALKAYPECETVPCD 144
E K +D LLPKPL++ ++ S + S+VRVAYQG+ GA+SE AA KAYP CE VPC+
Sbjct: 69 EVKKIFEDSPLLPKPLSSNQLTESVSNGSRVRVAYQGVRGAYSESAAEKAYPNCEAVPCE 128
Query: 145 DFETAFKAVELWLVDKAVLPIENSVDGSIHRNYDLLLRHRLHIVGEVQLRVNHCLLGLPG 204
+F+TAF+AVE WLVD+AVLPIENS+ GSIHRNYDLLLRH LHIVGEV+L V HCLL G
Sbjct: 129 EFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHNLHIVGEVKLAVRHCLLANHG 188
Query: 205 VRKEELKSVVSHPQALAQCEVMLNDLGAVRISXXXXXXXXXXXXXXXXRDTGAIASFRAA 264
V E+L+ V+SHPQALAQCE L LG VR + D A+AS +AA
Sbjct: 189 VNIEDLRRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKQIAFENLNDAAAVASEKAA 248
Query: 265 NIYGLDILAERIQDDDENITRFLVLARDPIIPGTDKPHKTSIVFSLEEGPGVLFKALAVF 324
IYGL+I+A+ IQDD +N+TRFL+LAR+PIIPGT++ KTSIVFSLEEGPGVLFKALAVF
Sbjct: 249 KIYGLNIVAKDIQDDCDNVTRFLMLAREPIIPGTNRLFKTSIVFSLEEGPGVLFKALAVF 308
Query: 325 SMRNINLSKIESRPQKQRPLRVVDDSNEGSAKYFDYLFYIDFEASMAEPRAQYALGQLQE 384
++R INL+KIESRP ++ PLR G KYFDYLFY+DFEASMA+ AQ AL L+E
Sbjct: 309 ALRQINLTKIESRPLRKHPLRA-----SGGLKYFDYLFYVDFEASMADEVAQNALRHLEE 363
Query: 385 FARFLRVLGCYPVDTVV 401
FA FLRVLG YPVDT +
Sbjct: 364 FATFLRVLGSYPVDTTM 380
>AT3G07630.1 | Symbols: ADT2 | arogenate dehydratase 2 |
chr3:2435457-2437530 FORWARD LENGTH=381
Length = 381
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/317 (62%), Positives = 238/317 (75%), Gaps = 5/317 (1%)
Query: 85 ESKGFHKDMNLLPKPLTAIDISSSPRDRSKVRVAYQGLPGAFSEDAALKAYPECETVPCD 144
E K +D LLPKPL++ ++ S + S+VRVAYQG+ GA+SE AA KAYP CE VPC+
Sbjct: 69 EVKKIFEDSPLLPKPLSSNQLTESVSNGSRVRVAYQGVRGAYSESAAEKAYPNCEAVPCE 128
Query: 145 DFETAFKAVELWLVDKAVLPIENSVDGSIHRNYDLLLRHRLHIVGEVQLRVNHCLLGLPG 204
+F+TAF+AVE WLVD+AVLPIENS+ GSIHRNYDLLLRH LHIVGEV+L V HCLL G
Sbjct: 129 EFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHNLHIVGEVKLAVRHCLLANHG 188
Query: 205 VRKEELKSVVSHPQALAQCEVMLNDLGAVRISXXXXXXXXXXXXXXXXRDTGAIASFRAA 264
V E+L+ V+SHPQALAQCE L LG VR + D A+AS +AA
Sbjct: 189 VNIEDLRRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKQIAFENLNDAAAVASEKAA 248
Query: 265 NIYGLDILAERIQDDDENITRFLVLARDPIIPGTDKPHKTSIVFSLEEGPGVLFKALAVF 324
IYGL+I+A+ IQDD +N+TRFL+LAR+PIIPGT++ KTSIVFSLEEGPGVLFKALAVF
Sbjct: 249 KIYGLNIVAKDIQDDCDNVTRFLMLAREPIIPGTNRLFKTSIVFSLEEGPGVLFKALAVF 308
Query: 325 SMRNINLSKIESRPQKQRPLRVVDDSNEGSAKYFDYLFYIDFEASMAEPRAQYALGQLQE 384
++R INL+KIESRP ++ PLR G KYFDYLFY+DFEASMA+ AQ AL L+E
Sbjct: 309 ALRQINLTKIESRPLRKHPLRA-----SGGLKYFDYLFYVDFEASMADEVAQNALRHLEE 363
Query: 385 FARFLRVLGCYPVDTVV 401
FA FLRVLG YPVDT +
Sbjct: 364 FATFLRVLGSYPVDTTM 380
>AT5G22630.1 | Symbols: ADT5 | arogenate dehydratase 5 |
chr5:7524645-7525922 FORWARD LENGTH=425
Length = 425
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/360 (55%), Positives = 250/360 (69%), Gaps = 11/360 (3%)
Query: 45 WECCCLGVLAQRAITPVEDEKSSSSPLV--ESPGAADEPLQNESKGFHKDMNLLPKPLTA 102
W+ C +LA + ++ E SSS +V S G+ D L SK H L +PLT
Sbjct: 59 WQSSC-AILASKVVSA---ENSSSVAVVNGHSNGSVDLSLV-PSKSQHNGKPGLIQPLTI 113
Query: 103 IDISSSPRDRSKVRVAYQGLPGAFSEDAALKAYPECETVPCDDFETAFKAVELWLVDKAV 162
D+S +P S +RVAYQG+PGA+SE AA KAYP E +PCD F+ AF+AVELW+ D+AV
Sbjct: 114 TDLSPAPSHGSTLRVAYQGVPGAYSEAAAGKAYPNSEAIPCDQFDVAFQAVELWIADRAV 173
Query: 163 LPIENSVDGSIHRNYDLLLRHRLHIVGEVQLRVNHCLLGLPGVRKEELKSVVSHPQALAQ 222
LP+ENS+ GSIHRNYDLLLRHRLHIVGEVQ+ V+HCLL LPGVR + + V+SHPQALAQ
Sbjct: 174 LPVENSLGGSIHRNYDLLLRHRLHIVGEVQIPVHHCLLALPGVRTDCITRVISHPQALAQ 233
Query: 223 CEVMLNDLG--AVRISXXXXXXXXXXXXXXXXRDTGAIASFRAANIYGLDILAERIQDDD 280
E LN L A + DT A+AS RAA +YGL ILA+ IQDD
Sbjct: 234 TEGSLNKLTPKAAIEAFHDTAAAAEYIAANNLHDTAAVASARAAELYGLQILADGIQDDA 293
Query: 281 ENITRFLVLARDPIIPGTDKPHKTSIVFSLEE--GPGVLFKALAVFSMRNINLSKIESRP 338
N+TRFL+LARDPIIP TD+P KTSIVF+ +E G VLFK L+ F+ RNI+L+KIESRP
Sbjct: 294 GNVTRFLMLARDPIIPRTDRPFKTSIVFAAQEHKGTSVLFKVLSAFAFRNISLTKIESRP 353
Query: 339 QKQRPLRVVDDSNEGSAKYFDYLFYIDFEASMAEPRAQYALGQLQEFARFLRVLGCYPVD 398
+ P+RVV D N G++K+F+Y FY+DFEASMAE RAQ AL ++QE+ FLRVLG YP+D
Sbjct: 354 HQNCPVRVVGDENVGTSKHFEYTFYVDFEASMAEARAQNALAEVQEYTSFLRVLGSYPMD 413
>AT3G44720.1 | Symbols: ADT4 | arogenate dehydratase 4 |
chr3:16271759-16273033 FORWARD LENGTH=424
Length = 424
Score = 360 bits (924), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/305 (60%), Positives = 228/305 (74%), Gaps = 4/305 (1%)
Query: 98 KPLTAIDISSSPRDRSKVRVAYQGLPGAFSEDAALKAYPECETVPCDDFETAFKAVELWL 157
+PLT D+S +P S +RVAYQG+PGA+SE AA KAYP C+ +PCD F+ AF+AVELW+
Sbjct: 108 QPLTITDLSPAPLHGSSLRVAYQGVPGAYSEAAAGKAYPNCDAIPCDQFDVAFQAVELWI 167
Query: 158 VDKAVLPIENSVDGSIHRNYDLLLRHRLHIVGEVQLRVNHCLLGLPGVRKEELKSVVSHP 217
D+AVLP+ENS+ GSIHRNYDLLLRHRLHIVGEVQ+ V+HCLL LPGVR + + V+SHP
Sbjct: 168 ADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQIPVHHCLLALPGVRTDCVSRVISHP 227
Query: 218 QALAQCEVMLNDLG--AVRISXXXXXXXXXXXXXXXXRDTGAIASFRAANIYGLDILAER 275
QALAQ E L+ L A R + DT A+AS RAA +Y L ILA+
Sbjct: 228 QALAQTEHSLDVLTPHAAREAFHDTAAAAEYISANDLHDTAAVASARAAELYNLQILADG 287
Query: 276 IQDDDENITRFLVLARDPIIPGTDKPHKTSIVFSLEE--GPGVLFKALAVFSMRNINLSK 333
IQDD N+TRFL+LAR+PIIP TD+P KTSIVF+ +E G VLFK L+ F+ R+I+L+K
Sbjct: 288 IQDDPGNVTRFLMLAREPIIPRTDRPFKTSIVFAAQEHKGTSVLFKVLSAFAFRDISLTK 347
Query: 334 IESRPQKQRPLRVVDDSNEGSAKYFDYLFYIDFEASMAEPRAQYALGQLQEFARFLRVLG 393
IESRP RPLRVV D + G++K F+Y+FY+DFEASMAEPRAQ AL ++QE+ FLRVLG
Sbjct: 348 IESRPHHNRPLRVVGDGSFGTSKNFEYMFYVDFEASMAEPRAQNALAEVQEYTSFLRVLG 407
Query: 394 CYPVD 398
YP+D
Sbjct: 408 SYPMD 412