Miyakogusa Predicted Gene
- Lj4g3v0149440.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0149440.1 Non Chatacterized Hit- tr|K4BC02|K4BC02_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,23.88,1e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat; no
desc,CUFF.46517.1
(443 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 535 e-152
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-105
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 355 4e-98
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 5e-95
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 2e-91
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 325 5e-89
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 324 8e-89
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 5e-88
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 3e-87
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 4e-87
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 318 7e-87
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 5e-85
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 307 1e-83
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 306 1e-83
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 306 2e-83
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 305 4e-83
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 305 5e-83
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 303 2e-82
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 2e-81
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 300 2e-81
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 2e-81
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 3e-81
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 298 6e-81
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 297 1e-80
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 4e-80
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 1e-79
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 3e-79
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 292 3e-79
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 292 3e-79
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 6e-79
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 6e-79
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 7e-79
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 291 8e-79
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 1e-78
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 4e-78
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 1e-77
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 286 2e-77
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 6e-77
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 8e-77
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 6e-76
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 9e-76
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 1e-75
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 280 1e-75
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 280 1e-75
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 2e-75
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 275 3e-74
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 4e-74
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 4e-74
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 4e-74
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 3e-73
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 6e-73
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 1e-72
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 3e-72
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 5e-72
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 9e-72
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 267 1e-71
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 265 4e-71
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 6e-71
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 1e-70
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 3e-70
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 5e-70
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 5e-70
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 5e-70
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 6e-70
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 2e-69
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 2e-69
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 258 4e-69
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 4e-69
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 9e-69
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 257 1e-68
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 1e-68
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 4e-68
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 1e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 1e-67
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 1e-67
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 253 2e-67
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 1e-66
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 250 1e-66
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 5e-66
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 248 5e-66
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 4e-65
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 244 6e-65
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 3e-64
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 3e-64
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 242 4e-64
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 6e-64
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 7e-64
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 240 1e-63
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 2e-63
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 7e-63
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 236 3e-62
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 236 3e-62
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 4e-62
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 6e-62
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 7e-62
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 233 2e-61
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 5e-61
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 229 3e-60
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 5e-60
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 7e-59
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 1e-58
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 3e-58
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 7e-57
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 4e-53
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 6e-53
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 204 9e-53
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 6e-52
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 7e-52
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 1e-51
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 7e-50
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 9e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 179 5e-45
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 9e-44
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 3e-38
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 3e-33
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 107 2e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 104 1e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 5e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 5e-22
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 7e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 100 1e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 100 2e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 5e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 98 1e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 95 8e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 9e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 9e-20
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 9e-18
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 88 9e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 1e-17
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 88 1e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 87 2e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 86 4e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 5e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 85 8e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 6e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 80 3e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 2e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 9e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 74 1e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 72 6e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 7e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 65 7e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 63 3e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 62 7e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 62 9e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 7e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 56 5e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 49 8e-06
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 535 bits (1378), Expect = e-152, Method: Compositional matrix adjust.
Identities = 248/425 (58%), Positives = 328/425 (77%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F +M RDV SWT MVDGLAK+G++D+AR LFD MP RN++SWNAMITGYAQN R+DEA
Sbjct: 194 FERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEAD 253
Query: 71 ELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEE 130
+LF+ MPERD ASWN M+TGF +N E+N+A LF +P+K+VI+WT+M+TGY ++ +EE
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 131 ALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALI 190
AL +F+KM +G +KPN GT+V++L ACS LA L EGQQIHQLISK+ Q+N V SAL+
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 191 NMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAN 250
NMYSK GEL ARK+FD+GL+ QRDLISWN MIA YAHHG+G EAI ++N+M++ GF+ +
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 251 DVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYII 310
VTY+ LL ACSHAGLV++G+++F L+++ S+ ++E+HY CLVDLCGRAGRLK+ I
Sbjct: 434 AVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI 493
Query: 311 EGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWK 370
+LS S +G +L+ CNVH I K V KK+L+ ++AGTY L+SN+YA+ GK +
Sbjct: 494 NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKRE 553
Query: 371 EAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFG 430
EAA +RMKMK+KGLKKQPGCSW++VG +FVVGDKSH Q E L+ +L L KM+K
Sbjct: 554 EAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNK 613
Query: 431 DILDD 435
++ D
Sbjct: 614 NVTSD 618
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 184/328 (56%), Gaps = 17/328 (5%)
Query: 11 FNQMQER-DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F+++ R +V +WT MV G +S ++ A LF MP RNVVSWN MI GYAQ+ R+D+A
Sbjct: 100 FDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKA 159
Query: 70 LELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSE 129
LELF+ MPER++ SWN+M+ Q G ++ A LF +P++DV++WT+M+ G A++G +
Sbjct: 160 LELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVD 219
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSAL 189
EA ++F M + N ++ + + E Q+ Q++ + F +++
Sbjct: 220 EARRLFDCMPERNIISWN-----AMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGF 274
Query: 190 INMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQ 248
I + E++ A +FD + ++++ISW MI Y + EA+N+F+KM G +
Sbjct: 275 I----RNREMNKACGLFDR--MPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 249 ANDVTYVELLTACSH-AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAF 307
N TYV +L+ACS AGLV EG Q +L+ Q E + L+++ ++G L A
Sbjct: 329 PNVGTYVSILSACSDLAGLV-EG-QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 308 YIIE-GLGVKLSLSVWGPLLAGCNVHGN 334
+ + GL + L W ++A HG+
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 190/368 (51%), Gaps = 34/368 (9%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER-DMAS 83
++ L K G+I +AR LFD +P R+VV+W +ITGY + + EA ELF+R+ R ++ +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 84 WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGG 143
W AM++G+ ++ +L+ AE LF E+P+++V++W +M+ GYAQ G ++AL++F +M
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVS--ALINMYSKCGELHI 201
+ N S + +L + +I + ++ VVS A+++ +K G++
Sbjct: 172 VSWN-----------SMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDE 220
Query: 202 ARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTAC 261
AR++FD + +R++ISWN MI YA + +EA LF M E F ++ ++T
Sbjct: 221 ARRLFD--CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF----ASWNTMITGF 274
Query: 262 SHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL----GVKL 317
+++ FD++ + I + ++ +EA + + VK
Sbjct: 275 IRNREMNKACGLFDRMPEKNVIS-----WTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 318 SLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE-NAGTYSLLSNMYASVGKWKEAANVR 376
++ + +L+ C+ G+ + + I K H+ N S L NMY+ G+ A
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR--- 386
Query: 377 MKMKDKGL 384
KM D GL
Sbjct: 387 -KMFDNGL 393
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/453 (39%), Positives = 279/453 (61%), Gaps = 34/453 (7%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F+ M RDV SW T++ G A+SG+ID+AR LFD P+++V +W AM++GY QNR ++EA
Sbjct: 242 FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAR 301
Query: 71 ELFERMPERDMASWNAML-------------------------------TGFFQNGELNR 99
ELF++MPER+ SWNAML TG+ Q G+++
Sbjct: 302 ELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISE 361
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS 159
A+ LF ++P++D ++W +M+ GY+Q G S EAL++F +M+ GG + N +F + L C+
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCA 420
Query: 160 GLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISW 219
+ +L G+Q+H + K G++ V +AL+ MY KCG + A +F + + +D++SW
Sbjct: 421 DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE--MAGKDIVSW 478
Query: 220 NGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
N MIA Y+ HG+G A+ F M+ G + +D T V +L+ACSH GLVD+G QYF + +
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 280 NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGK 339
+ + HYAC+VDL GRAG L++A +++ + + ++WG LL VHGN ++ +
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAE 598
Query: 340 LVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTV 399
A KI +E EN+G Y LLSN+YAS G+W + +R++M+DKG+KK PG SWIE+ N
Sbjct: 599 TAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKT 658
Query: 400 QVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDI 432
F VGD+ H + + + L L +MKK G +
Sbjct: 659 HTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 200/410 (48%), Gaps = 57/410 (13%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F +M S+ M+ G ++G + AR LFD MP R++VSWN MI GY +NR L +A
Sbjct: 87 FKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAR 146
Query: 71 ELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEE 130
ELFE MPERD+ SWN ML+G+ QNG ++ A +F +P+K+ ++W ++++ Y Q+ EE
Sbjct: 147 ELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEE 206
Query: 131 ALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTR-VVS-- 187
A +F K + N L N +LG + E +Q + N R VVS
Sbjct: 207 ACMLF-KSRENWALVSWN----CLLGGFVKKKKIVEARQFFDSM-------NVRDVVSWN 254
Query: 188 ALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM---QE 244
+I Y++ G++ AR++FD+ + +D+ +W M++ Y + EA LF+KM E
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPV--QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNE 312
Query: 245 LGFQANDVTYVE------------------------LLTACSHAGLVDEGIQYFDKLLKN 280
+ + A YV+ ++T + G + E FDK+ K
Sbjct: 313 VSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 281 RSIQVKEDHYACLVDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLLAGCNVHGNADI 337
+ +A ++ ++G EA F +E G +L+ S + L+ C ++
Sbjct: 373 DPVS-----WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 338 GKLVAKKILKVEHEN---AGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
GK + +++K +E G LL MY G +EA ++ +M K +
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLL--MYCKCGSIEEANDLFKEMAGKDI 475
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/413 (41%), Positives = 271/413 (65%), Gaps = 6/413 (1%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F +M ERD SW +M+ GL K+G + DAR LFD MP R+++SWN M+ GYA+ R + +A
Sbjct: 177 FEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAF 236
Query: 71 ELFERMPERDMASWNAMLTGFFQNGELNRAEKLF--AELPQKDVITWTSMMTGYAQHGLS 128
ELFE+MPER+ SW+ M+ G+ + G++ A +F LP K+V+TWT ++ GYA+ GL
Sbjct: 237 ELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
+EA ++ +M A+G LK + +++L AC+ L+ G +IH ++ ++ N V++A
Sbjct: 297 KEADRLVDQMVASG-LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNA 355
Query: 189 LINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
L++MY+KCG L A +F+D + ++DL+SWN M+ HG+G EAI LF++M+ G +
Sbjct: 356 LLDMYAKCGNLKKAFDVFND--IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIR 413
Query: 249 ANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFY 308
+ VT++ +L +C+HAGL+DEGI YF + K + + +HY CLVDL GR GRLKEA
Sbjct: 414 PDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIK 473
Query: 309 IIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGK 368
+++ + ++ ++ +WG LL C +H DI K V ++K++ + G YSLLSN+YA+
Sbjct: 474 VVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAED 533
Query: 369 WKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLG 421
W+ A++R KMK G++K G S +E+ + + F V DKSH +S+ + Y +LG
Sbjct: 534 WEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQI-YQMLG 585
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 152/328 (46%), Gaps = 51/328 (15%)
Query: 96 ELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL 155
+ N A ++F ++ + +V S++ +AQ+ +A +F++MQ GL +N T+ +L
Sbjct: 66 QTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQ-RFGLFADNFTYPFLL 124
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKC------------------- 196
ACSG + L + +H I K G + V +ALI+ YS+C
Sbjct: 125 KACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD 184
Query: 197 --------------GELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
GEL AR++FD+ + QRDLISWN M+ YA ++A LF KM
Sbjct: 185 TVSWNSMLGGLVKAGELRDARRLFDE--MPQRDLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL-LKNRSIQVKEDHYACLVDLCGRAG 301
E N V++ ++ S AG ++ FDK+ L +++ + ++ G
Sbjct: 243 PE----RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVT----WTIIIAGYAEKG 294
Query: 302 RLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSL 358
LKEA +++ + G+K + +LA C G +G + ILK + + Y L
Sbjct: 295 LLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRI-HSILKRSNLGSNAYVL 353
Query: 359 --LSNMYASVGKWKEAANVRMKMKDKGL 384
L +MYA G K+A +V + K L
Sbjct: 354 NALLDMYAKCGNLKKAFDVFNDIPKKDL 381
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 162 ASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
A+L + +Q+H I + E+ + LI+ S C + ++A ++F+ +++ ++ N
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQ--VQEPNVHLCNS 87
Query: 222 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG---LVDEGIQYFDKLL 278
+I A+A + +A +F++MQ G A++ TY LL ACS +V + +KL
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRL--KEAFYIIEGLGVKLSLSVWGPLLAG 328
+ I V L+D R G L ++A + E + + ++S W +L G
Sbjct: 148 LSSDIYVPN----ALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGG 194
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 355 bits (910), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 266/422 (63%), Gaps = 5/422 (1%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M ER V +WTTMV G ++ R+DDAR +FD MP + VSW +M+ GY QN R+++A
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 71 ELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEE 130
ELFE MP + + + NAM++G Q GE+ +A ++F + +++ +W +++ + ++G E
Sbjct: 255 ELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELE 314
Query: 131 ALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALI 190
AL +F MQ G ++P T +++L C+ LASL G+Q+H + + F + V S L+
Sbjct: 315 ALDLFILMQKQG-VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 191 NMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQA 249
MY KCGEL ++ IFD +D+I WN +I+ YA HG G EA+ +F +M G +
Sbjct: 374 TMYIKCGELVKSKLIFDR--FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 250 NDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYI 309
N+VT+V L+ACS+AG+V+EG++ ++ + ++ HYAC+VD+ GRAGR EA +
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEM 491
Query: 310 IEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKW 369
I+ + V+ +VWG LL C H D+ + AKK++++E EN+GTY LLSNMYAS G+W
Sbjct: 492 IDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRW 551
Query: 370 KEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGD-KSHSQSEMLEYLLLGLHTKMKK 428
+ A +R MK + ++K PGCSW EV N V F G SH + E + +L L +++
Sbjct: 552 ADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLRE 611
Query: 429 FG 430
G
Sbjct: 612 AG 613
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 182/352 (51%), Gaps = 40/352 (11%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M +R++ SW +V G K+G ID+AR +FD MP RNVVSW A++ GY N ++D A
Sbjct: 71 FDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAE 130
Query: 71 ELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEE 130
LF +MPE++ SW ML GF Q+G ++ A KL+ +P KD I TSM+ G + G +E
Sbjct: 131 SLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDE 190
Query: 131 ALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT----------GFQ 180
A ++F +M + T+ T++ + + ++I ++ + G+
Sbjct: 191 AREIFDEMSERSVI-----TWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYV 245
Query: 181 ENTRV-----------------VSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
+N R+ +A+I+ + GE+ AR++FD +++R+ SW +I
Sbjct: 246 QNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDS--MKERNDASWQTVI 303
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
+ +G+ EA++LF MQ+ G + T + +L+ C+ + G Q +L++
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR---C 360
Query: 284 QVKEDHY--ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
Q D Y + L+ + + G L ++ I + K + +W +++G HG
Sbjct: 361 QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASHG 411
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 189/374 (50%), Gaps = 47/374 (12%)
Query: 26 VDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWN 85
+ L++ G+I +AR LFD +++ SWN+M+ GY N +A +LF+ MP+R++ SWN
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWN 83
Query: 86 AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
+++G+ +NGE++ A K+F +P+++V++WT+++ GY +G + A +F KM +
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP-----E 138
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKI 205
N ++ +L + + +++++I ++ +++I+ K G + AR+I
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 206 FDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE----------LGFQAN----- 250
FD+ + +R +I+W M+ Y + ++A +F+ M E +G+ N
Sbjct: 195 FDE--MSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIED 252
Query: 251 -----DVTYVELLTACS-------HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCG 298
+V V+ + AC+ G + + + FD +K R+ + + ++ +
Sbjct: 253 AEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDS-MKERN----DASWQTVIKIHE 307
Query: 299 RAGRLKEA---FYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE-NAG 354
R G EA F +++ GV+ + +L+ C + GK V ++++ + + +
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVY 367
Query: 355 TYSLLSNMYASVGK 368
S+L MY G+
Sbjct: 368 VASVLMTMYIKCGE 381
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 117/267 (43%), Gaps = 56/267 (20%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N +T + G+++ A KLF K + +W SM+ GY + + +A K+F +M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
P+ +IS G L++ Y K GE+ ARK
Sbjct: 75 -PD-----------------------RNIISWNG----------LVSGYMKNGEIDEARK 100
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+FD L+ +R+++SW ++ Y H+G + A +LF KM E N V++ +L
Sbjct: 101 VFD--LMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE----KNKVSWTVMLIGFLQD 154
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
G +D+ + ++ + +I + + LC + GR+ EA I + + + S+ W
Sbjct: 155 GRIDDACKLYEMIPDKDNIA----RTSMIHGLC-KEGRVDEAREIFDEMSER-SVITWTT 208
Query: 325 LLAGCNVHGNADIGKLVAKKILKVEHE 351
++ G + D A+KI V E
Sbjct: 209 MVTGYGQNNRVDD----ARKIFDVMPE 231
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 345 bits (884), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 163/412 (39%), Positives = 258/412 (62%), Gaps = 4/412 (0%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDE 68
+ F++M+ER+V +WTTM+ G ++ R+D AR LF+ MP + VSW +M+ GY + R+++
Sbjct: 193 LIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIED 252
Query: 69 ALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLS 128
A E FE MP + + + NAM+ GF + GE+++A ++F + +D TW M+ Y + G
Sbjct: 253 AEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE 312
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
EAL +F +MQ G ++P+ + +++L C+ LASL G+Q+H + + F ++ V S
Sbjct: 313 LEALDLFAQMQKQG-VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV 371
Query: 189 LINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
L+ MY KCGEL A+ +FD +D+I WN +I+ YA HG G EA+ +F++M G
Sbjct: 372 LMTMYVKCGELVKAKLVFDR--FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTM 429
Query: 249 ANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFY 308
N VT + +LTACS+AG ++EG++ F+ + + +HY+C VD+ GRAG++ +A
Sbjct: 430 PNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAME 489
Query: 309 IIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGK 368
+IE + +K +VWG LL C H D+ ++ AKK+ + E +NAGTY LLS++ AS K
Sbjct: 490 LIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSK 549
Query: 369 WKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGD-KSHSQSEMLEYLL 419
W + A VR M+ + K PGCSWIEVG V +F G K+H + M+ +L
Sbjct: 550 WGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMML 601
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 187/401 (46%), Gaps = 78/401 (19%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F+ +Q + + SW ++V G +G +AR LFD M RNVVSWN +++GY +NR + EA
Sbjct: 40 FDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEAR 99
Query: 71 ELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEE 130
+FE MPER++ SW AM+ G+ Q G + AE LF +P+++ ++WT M G G ++
Sbjct: 100 NVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDK 159
Query: 131 ALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK----------TGFQ 180
A K++ M + N ++G + E + I + + TG++
Sbjct: 160 ARKLYDMMPVKDVVASTN-----MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYR 214
Query: 181 ENTRV------------------------------------------------VSALINM 192
+N RV +A+I
Sbjct: 215 QNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Query: 193 YSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDV 252
+ + GE+ AR++FD L+ RD +W GMI AY G+ EA++LF +MQ+ G + +
Sbjct: 275 FGEVGEISKARRVFD--LMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFP 332
Query: 253 TYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY--ACLVDLCGRAGRLKEAFYII 310
+ + +L+ C+ + G Q L++ Q +D Y + L+ + + G L +A +
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVR---CQFDDDVYVASVLMTMYVKCGELVKAKLVF 389
Query: 311 EGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE 351
+ K + +W +++G HG + ++ LK+ HE
Sbjct: 390 DRFSSK-DIIMWNSIISGYASHG-------LGEEALKIFHE 422
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 137/250 (54%), Gaps = 15/250 (6%)
Query: 26 VDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWN 85
+ L++ G+I++AR FD + + + SWN++++GY N EA +LF+ M ER++ SWN
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 86 AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
+++G+ +N + A +F +P+++V++WT+M+ GY Q G+ EA +F +M
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER---- 139
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKI 205
N ++ + G + + ++++ ++ +T ++ L + G + AR I
Sbjct: 140 -NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGL----CREGRVDEARLI 194
Query: 206 FDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
FD+ +R+R++++W MI Y + + A LF M E +V++ +L + +G
Sbjct: 195 FDE--MRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE----KTEVSWTSMLLGYTLSG 248
Query: 266 LVDEGIQYFD 275
+++ ++F+
Sbjct: 249 RIEDAEEFFE 258
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 332 bits (852), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 262/402 (65%), Gaps = 4/402 (0%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M +D +SW TM+ G A+ G ++ AR LF M +N VSWNAMI+GY + L++A
Sbjct: 147 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKAS 206
Query: 71 ELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP-QKDVITWTSMMTGYAQHGLSE 129
F+ P R + +W AM+TG+ + ++ AE +F ++ K+++TW +M++GY ++ E
Sbjct: 207 HFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPE 266
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSAL 189
+ LK+F M G ++PN+ + L CS L++L G+QIHQ++SK+ + +++L
Sbjct: 267 DGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSL 325
Query: 190 INMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQA 249
I+MY KCGEL A K+F+ +++++D+++WN MI+ YA HG ++A+ LF +M + +
Sbjct: 326 ISMYCKCGELGDAWKLFE--VMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRP 383
Query: 250 NDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYI 309
+ +T+V +L AC+HAGLV+ G+ YF+ ++++ ++ + DHY C+VDL GRAG+L+EA +
Sbjct: 384 DWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKL 443
Query: 310 IEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKW 369
I + + +V+G LL C VH N ++ + A+K+L++ +NA Y L+N+YAS +W
Sbjct: 444 IRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRW 503
Query: 370 KEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQ 411
++ A VR +MK+ + K PG SWIE+ N V F D+ H +
Sbjct: 504 EDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPE 545
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 153/313 (48%), Gaps = 13/313 (4%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQN-RRLDEALELFERMPERDMAS 83
++ +SG ID A +F M +N ++WN+++ G +++ R+ EA +LF+ +PE D S
Sbjct: 67 IIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFS 126
Query: 84 WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGG 143
+N ML+ + +N +A+ F +P KD +W +M+TGYA+ G E+A ++F M
Sbjct: 127 YNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----- 181
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR 203
++ N ++ ++ L + ++ G T A+I Y K ++ +A
Sbjct: 182 MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWT----AMITGYMKAKKVELAE 237
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
+F D + ++L++WN MI+ Y + + + LF M E G + N L CS
Sbjct: 238 AMFKD-MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWG 323
+ G Q +++ ++ L+ + + G L +A+ + E + K + W
Sbjct: 297 LSALQLGRQ-IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK-DVVAWN 354
Query: 324 PLLAGCNVHGNAD 336
+++G HGNAD
Sbjct: 355 AMISGYAQHGNAD 367
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 325 bits (832), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 262/428 (61%), Gaps = 10/428 (2%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRL 66
F +M +R V S+T+M+ G A+ G +A LF+ M +V + A++ A+ R L
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 67 DEALELFERMPERDMA----SWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
DE + E + E D+ NA++ + + G + AE +F+E+ KD+I+W +++ GY
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
+++ + EAL +F + P+ T VL AC+ L++ +G++IH I + G+ +
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 533
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
V ++L++MY+KCG L +A +FDD + +DL+SW MIA Y HG+G EAI LFN+M
Sbjct: 534 RHVANSLVDMYAKCGALLLAHMLFDD--IASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
++ G +A+++++V LL ACSH+GLVDEG ++F+ + I+ +HYAC+VD+ R G
Sbjct: 592 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGD 651
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNM 362
L +A+ IE + + ++WG LL GC +H + + + VA+K+ ++E EN G Y L++N+
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANI 711
Query: 363 YASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGL 422
YA KW++ +R ++ +GL+K PGCSWIE+ V +FV GD S+ ++E +E L +
Sbjct: 712 YAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKV 771
Query: 423 HTKMKKFG 430
+M + G
Sbjct: 772 RARMIEEG 779
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 172/332 (51%), Gaps = 19/332 (5%)
Query: 8 TMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQN 63
+ F++++ W +++ LAKSG + LF +M V +++ + ++
Sbjct: 149 SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 64 RRLD--EALELF---ERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSM 118
R + E L F ER+ N+++ + +N ++ A K+F E+ ++DVI+W S+
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 119 MTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG 178
+ GY +GL+E+ L +F +M + G++ + T V+V C+ ++ G+ +H + K
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
F R + L++MYSKCG+L A+ +F + + R ++S+ MIA YA G EA+ L
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFRE--MSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA--CLVDL 296
F +M+E G + T +L C+ L+DEG + + + +N + D + L+D+
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN---DLGFDIFVSNALMDM 441
Query: 297 CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ G ++EA + + VK +S W ++ G
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIIS-WNTIIGG 472
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 122/235 (51%), Gaps = 7/235 (2%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G+L A ++F E+ + + W +M A+ G ++ +F KM ++ G++ ++ TF V
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCV 201
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
+ S L S+ G+Q+H I K+GF E V ++L+ Y K + ARK+FD+ + +R
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE--MTER 259
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
D+ISWN +I Y +G + +++F +M G + + T V + C+ + L+ G
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 275 DKLLKNRSIQVKEDHYA-CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ ++ +ED + L+D+ + G L A + + + S+ + ++AG
Sbjct: 320 S--IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR-SVVSYTSMIAG 371
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 117/234 (50%), Gaps = 17/234 (7%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALF-----------DRMPLRNVVSWNAMI 57
+ F++M+ +D+ SW T++ G +K+ ++A +LF D + V+ A +
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 58 TGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTS 117
+ + + R + + +R +A N+++ + + G L A LF ++ KD+++WT
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVA--NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS-K 176
M+ GY HG +EA+ +F +M+ G++ + +FV++L ACS + EG + ++ +
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMR-QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 177 TGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIA-AYAHH 229
+ + +++M ++ G+L A + F + + D W ++ HH
Sbjct: 630 CKIEPTVEHYACIVDMLARTGDLIKAYR-FIENMPIPPDATIWGALLCGCRIHH 682
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 110 KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
+ V + + + + G E A+K+ +G + T +VL C+ SL +G++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLC---VSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
+ I GF ++ + S L MY+ CG+L A ++FD+ ++ + WN ++ A
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE--VKIEKALFWNILMNELAKS 173
Query: 230 GYGNEAINLFNKMQELGFQANDVTY 254
G + +I LF KM G + + T+
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTF 198
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 324 bits (830), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 258/466 (55%), Gaps = 42/466 (9%)
Query: 4 DRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL---------------- 47
D C + F ++E+DV SW +M++G + G D A LF +M
Sbjct: 183 DSACKV-FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 48 ----------RNVVSW-------------NAMITGYAQNRRLDEALELFERMPERDMASW 84
R V S+ NAM+ Y + +++A LF+ M E+D +W
Sbjct: 242 CAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTW 301
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
ML G+ + + A ++ +PQKD++ W ++++ Y Q+G EAL +F ++Q +
Sbjct: 302 TTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNM 361
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
K N T V+ L AC+ + +L G+ IH I K G + N V SALI+MYSKCG+L +R+
Sbjct: 362 KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSRE 421
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+F+ + +RD+ W+ MI A HG GNEA+++F KMQE + N VT+ + ACSH
Sbjct: 422 VFNS--VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 479
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
GLVDE F ++ N I +E HYAC+VD+ GR+G L++A IE + + S SVWG
Sbjct: 480 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 539
Query: 325 LLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
LL C +H N ++ ++ ++L++E N G + LLSN+YA +GKW+ + +R M+ GL
Sbjct: 540 LLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL 599
Query: 385 KKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFG 430
KK+PGCS IE+ + F+ GD +H SE + L + K+K G
Sbjct: 600 KKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 645
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 180/381 (47%), Gaps = 83/381 (21%)
Query: 28 GLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM---------PE 78
L+ ++ AR +FD +P N +WN +I YA D L ++ + P
Sbjct: 73 ALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPN 130
Query: 79 R---------------------------------DMASWNAMLTGFFQNGELNRAEKLFA 105
+ D+ N+++ +F G+L+ A K+F
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ +KDV++W SM+ G+ Q G ++AL++F KM++ +K ++ T V VL AC+ + +L
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLE 249
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD--------------DGL- 210
G+Q+ I + N + +A+++MY+KCG + A+++FD DG
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 211 --------------LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ-ELGFQANDVTYV 255
+ Q+D+++WN +I+AY +G NEA+ +F+++Q + + N +T V
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369
Query: 256 ELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDL---CGRAGRLKEAFYIIEG 312
L+AC+ G ++ G ++ +K I++ + L+ + CG + +E F +E
Sbjct: 370 STLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE- 427
Query: 313 LGVKLSLSVWGPLLAGCNVHG 333
K + VW ++ G +HG
Sbjct: 428 ---KRDVFVWSAMIGGLAMHG 445
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 144/287 (50%), Gaps = 10/287 (3%)
Query: 86 AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
A L+ F L A K+F E+P+ + W +++ YA ++ F M +
Sbjct: 72 AALSSF---ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCY 128
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKI 205
PN TF ++ A + ++SL+ GQ +H + K+ + V ++LI+ Y CG+L A K+
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 206 FDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
F ++++D++SWN MI + G ++A+ LF KM+ +A+ VT V +L+AC+
Sbjct: 189 FTT--IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR 246
Query: 266 LVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPL 325
++ G Q + +NR + V ++D+ + G +++A + + + K +++ W +
Sbjct: 247 NLEFGRQVCSYIEENR-VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT-WTTM 304
Query: 326 LAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEA 372
L G + + + + V + ++ ++ L + Y GK EA
Sbjct: 305 LDGYAISEDYEAAREVLNSM---PQKDIVAWNALISAYEQNGKPNEA 348
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 322 bits (824), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 257/428 (60%), Gaps = 7/428 (1%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F +M E++V WT+M++G + + AR FD P R++V WN MI+GY + + EA
Sbjct: 50 VFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEA 109
Query: 70 LELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSE 129
LF++MP RD+ SWN +L G+ G++ E++F ++P+++V +W ++ GYAQ+G
Sbjct: 110 RSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVS 169
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE-NTRVVSA 188
E L F +M G + PN+ T VL AC+ L + G+ +H+ G+ + + V +A
Sbjct: 170 EVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNA 229
Query: 189 LINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
LI+MY KCG + IA ++F +++RDLISWN MI A HG+G EA+NLF++M+ G
Sbjct: 230 LIDMYGKCGAIEIAMEVFKG--IKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGIS 287
Query: 249 ANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFY 308
+ VT+V +L AC H GLV++G+ YF+ + + SI + +H C+VDL RAG L +A
Sbjct: 288 PDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVE 347
Query: 309 IIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGK 368
I + VK +W LL V+ DIG++ ++++K+E N + +LSN+Y G+
Sbjct: 348 FINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGR 407
Query: 369 WKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKK 428
+ +AA +++ M+D G KK+ G SWIE + + F + H ++E L+ +L ++K
Sbjct: 408 FDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRIL----RELKS 463
Query: 429 FGDILDDD 436
F + D++
Sbjct: 464 FNILRDEE 471
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 118/246 (47%), Gaps = 23/246 (9%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFV-- 152
G + A K+F E+ +K+V+ WTSM+ GY + A + F L P +
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD-------LSPERDIVLWN 94
Query: 153 TVLGACSGLASLTEGQQIH-QLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL 211
T++ + ++ E + + Q+ + NT ++ Y+ G++ ++FDD +
Sbjct: 95 TMISGYIEMGNMLEARSLFDQMPCRDVMSWNT-----VLEGYANIGDMEACERVFDD--M 147
Query: 212 RQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQANDVTYVELLTACSHAGLVDEG 270
+R++ SWNG+I YA +G +E + F +M + G ND T +L+AC+ G D G
Sbjct: 148 PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG 207
Query: 271 --IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ + + L + V + L+D+ G+ G ++ A + +G+ + L W ++ G
Sbjct: 208 KWVHKYGETLGYNKVDVNVKN--ALIDMYGKCGAIEIAMEVFKGIK-RRDLISWNTMING 264
Query: 329 CNVHGN 334
HG+
Sbjct: 265 LAAHGH 270
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 319 bits (817), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/439 (37%), Positives = 254/439 (57%), Gaps = 42/439 (9%)
Query: 35 IDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTG---- 90
ID R +F+ MP ++VVS+N +I GYAQ+ ++AL + M D+ + L+
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 91 -----------------------------------FFQNGELNRAEKLFAELPQKDVITW 115
+ ++ + +E++F+ L +D I+W
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
S++ GY Q+G EAL++F +M +KP F +V+ AC+ LA+L G+Q+H +
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEA 235
+ GF N + SAL++MYSKCG + ARKIFD + D +SW +I +A HG+G+EA
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDR--MNVLDEVSWTAIIMGHALHGHGHEA 428
Query: 236 INLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVD 295
++LF +M+ G + N V +V +LTACSH GLVDE YF+ + K + + +HYA + D
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 488
Query: 296 LCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGT 355
L GRAG+L+EA+ I + V+ + SVW LL+ C+VH N ++ + VA+KI V+ EN G
Sbjct: 489 LLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGA 548
Query: 356 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEML 415
Y L+ NMYAS G+WKE A +R++M+ KGL+K+P CSWIE+ N FV GD+SH + +
Sbjct: 549 YVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
Query: 416 EYLLLGLHTKMKKFGDILD 434
L + +M+K G + D
Sbjct: 609 NEFLKAVMEQMEKEGYVAD 627
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 116/263 (44%), Gaps = 45/263 (17%)
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F L V+ W S++ + L +AL F +M+A+G P++ F +VL +C+ +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMD 120
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKC--------------------------- 196
L G+ +H I + G + +AL+NMY+K
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 197 --GELHI-------ARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGF 247
E I R++F+ ++ ++D++S+N +IA YA G +A+ + +M
Sbjct: 181 VKAETCIMPFGIDSVRRVFE--VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 238
Query: 248 QANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY--ACLVDLCGRAGRLKE 305
+ + T +L S V +G + +++ + D Y + LVD+ ++ R+++
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRK---GIDSDVYIGSSLVDMYAKSARIED 295
Query: 306 AFYIIEGLGVKLSLSVWGPLLAG 328
+ + L + +S W L+AG
Sbjct: 296 SERVFSRLYCRDGIS-WNSLVAG 317
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 318 bits (816), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/431 (36%), Positives = 262/431 (60%), Gaps = 7/431 (1%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSW---NAMITGYAQNRRLDEALEL 72
E D ++ +++ A +G + + + + R S+ N++++ Y + + DEA +
Sbjct: 283 ELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAI 342
Query: 73 FERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEAL 132
FE+MP +D+ SWNA+L+G+ +G + A+ +F E+ +K++++W M++G A++G EE L
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 133 KMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINM 192
K+F+ M+ G +P + F + +C+ L + GQQ H + K GF + +ALI M
Sbjct: 403 KLFSCMKREG-FEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 193 YSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDV 252
Y+KCG + AR++F + D +SWN +IAA HG+G EA++++ +M + G + + +
Sbjct: 462 YAKCGVVEEARQVFRT--MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 253 TYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEG 312
T + +LTACSHAGLVD+G +YFD + I DHYA L+DL R+G+ +A +IE
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIES 579
Query: 313 LGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEA 372
L K + +W LL+GC VHGN ++G + A K+ + E+ GTY LLSNM+A+ G+W+E
Sbjct: 580 LPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEV 639
Query: 373 ANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDI 432
A VR M+D+G+KK+ CSWIE+ V F+V D SH ++E + L L +M++ G +
Sbjct: 640 ARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYV 699
Query: 433 LDDDLS-RDVE 442
D DVE
Sbjct: 700 PDTSFVLHDVE 710
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 194/413 (46%), Gaps = 53/413 (12%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP--QKD 111
N +I Y ++ L+ A +LF+ + E D + M++G+ +G++ A +F + P +D
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 112 VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ--- 168
+ + +M+TG++ + A+ +F KM+ + G KP+N TF +VL +GLA + + +
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMK-HEGFKPDNFTFASVL---AGLALVADDEKQC 168
Query: 169 -QIHQLISKTGFQENTRVVSALINMYSKCGE----LHIARKIFDD--------------- 208
Q H K+G T V +AL+++YSKC LH ARK+FD+
Sbjct: 169 VQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTG 228
Query: 209 ---------------GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVT 253
G+ L+++N MI+ Y + G+ EA+ + +M G + ++ T
Sbjct: 229 YVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFT 288
Query: 254 YVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL 313
Y ++ AC+ AGL+ G Q +L+ D+ LV L + G+ EA I E +
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKM 346
Query: 314 GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAA 373
K L W LL+G G+ KL+ K++ + +N ++ ++ + A G +E
Sbjct: 347 PAK-DLVSWNALLSGYVSSGHIGEAKLIFKEM---KEKNILSWMIMISGLAENGFGEEGL 402
Query: 374 NVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKM 426
+ MK +G + C + G V+G + Q + L +G + +
Sbjct: 403 KLFSCMKREGFEP---CDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSL 452
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 138/314 (43%), Gaps = 44/314 (14%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F +M +D+ SW ++ G SG I +A+ +F M +N++SW MI+G A+N +E L
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 71 ELFERMP---------------------------------------ERDMASWNAMLTGF 91
+LF M + +++ NA++T +
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 92 FQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
+ G + A ++F +P D ++W +++ QHG EA+ ++ +M G++P+ T
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKK-GIRPDRITL 521
Query: 152 VTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
+TVL ACS + +G++ + + LI++ + G+ A + +
Sbjct: 522 LTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLP 581
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
+ I W +++ HG I +K+ L +D TY+ L + G +E
Sbjct: 582 FKPTAEI-WEALLSGCRVHGNMELGIIAADKLFGL-IPEHDGTYMLLSNMHAATGQWEE- 638
Query: 271 IQYFDKLLKNRSIQ 284
+ KL+++R ++
Sbjct: 639 VARVRKLMRDRGVK 652
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 318 bits (814), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 273/466 (58%), Gaps = 44/466 (9%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F++ RDV S+T ++ G A G I++A+ LFD +P+++VVSWNAMI+GYA+ EA
Sbjct: 191 VFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEA 250
Query: 70 LELFERM------PE--------------------RDMASW-------------NAMLTG 90
LELF+ M P+ R + W NA++
Sbjct: 251 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL 310
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ + GEL A LF LP KDVI+W +++ GY L +EAL +F +M +G PN+ T
Sbjct: 311 YSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE-TPNDVT 369
Query: 151 FVTVLGACSGLASLTEGQQIHQLISK--TGFQENTRVVSALINMYSKCGELHIARKIFDD 208
+++L AC+ L ++ G+ IH I K G + + ++LI+MY+KCG++ A ++F+
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 209 GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVD 268
L + L SWN MI +A HG + + +LF++M+++G Q +D+T+V LL+ACSH+G++D
Sbjct: 430 IL--HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLD 487
Query: 269 EGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
G F + ++ + K +HY C++DL G +G KEA +I + ++ +W LL
Sbjct: 488 LGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKA 547
Query: 329 CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQP 388
C +HGN ++G+ A+ ++K+E EN G+Y LLSN+YAS G+W E A R + DKG+KK P
Sbjct: 548 CKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVP 607
Query: 389 GCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
GCS IE+ + V F++GDK H ++ + +L + ++K G + D
Sbjct: 608 GCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPD 653
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 169/286 (59%), Gaps = 9/286 (3%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
++I+ Y QN RL++A ++F++ P RD+ S+ A++ G+ G + A+KLF E+P KDV+
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
+W +M++GYA+ G +EAL++F M ++P+ T VTV+ AC+ S+ G+Q+H
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKT-NVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
I GF N ++V+ALI++YSKCGEL A +F+ L +D+ISWN +I Y H
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFER--LPYKDVISWNTLIGGYTHMNLYK 349
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG---IQYFDKLLKNRSIQVKEDHY 290
EA+ LF +M G NDVT + +L AC+H G +D G Y DK LK +
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG--VTNASSLR 407
Query: 291 ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
L+D+ + G ++ A + + K SLS W ++ G +HG AD
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHK-SLSSWNAMIFGFAMHGRAD 452
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 129/275 (46%), Gaps = 40/275 (14%)
Query: 86 AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
+L+ F+ L A +F + + +++ W +M G+A ALK++ M + GL
Sbjct: 75 CILSPHFEG--LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM-ISLGLL 131
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKI 205
PN+ TF VL +C+ + EGQQIH + K G + V ++LI+MY + G L A K+
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 206 FDDGLLRQ-----------------------------RDLISWNGMIAAYAHHGYGNEAI 236
FD R +D++SWN MI+ YA G EA+
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 237 NLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ---YFDKLLKNRSIQVKEDHYACL 293
LF M + + ++ T V +++AC+ +G ++ G Q + D ++++ L
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVN----AL 307
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+DL + G L+ A + E L K +S W L+ G
Sbjct: 308 IDLYSKCGELETACGLFERLPYKDVIS-WNTLIGG 341
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 259/425 (60%), Gaps = 10/425 (2%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPE----RD 80
+V K G + +AR + D M R+VVSWN+++ GYAQN+R D+ALE+ M D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 81 MASWNAMLTGFFQNGELN--RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM 138
+ ++L N + +F ++ +K +++W M+ Y ++ + EA++++++M
Sbjct: 241 AGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM 300
Query: 139 QANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGE 198
+A+G +P+ + +VL AC ++L+ G++IH I + N + +ALI+MY+KCG
Sbjct: 301 EADG-FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359
Query: 199 LHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL 258
L AR +F++ ++ RD++SW MI+AY G G +A+ LF+K+Q+ G + + +V L
Sbjct: 360 LEKARDVFEN--MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLS 318
ACSHAGL++EG F + + I + +H AC+VDL GRAG++KEA+ I+ + ++ +
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPN 477
Query: 319 LSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMK 378
VWG LL C VH + DIG L A K+ ++ E +G Y LLSN+YA G+W+E N+R
Sbjct: 478 ERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNI 537
Query: 379 MKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLS 438
MK KGLKK PG S +EV + F+VGD+SH QS+ + L L KMK+ G + D + +
Sbjct: 538 MKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESA 597
Query: 439 -RDVE 442
DVE
Sbjct: 598 LHDVE 602
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 142/296 (47%), Gaps = 28/296 (9%)
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS 159
A K+F E+P+++VI M+ Y +G E +K+F M ++P++ TF VL ACS
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM-CGCNVRPDHYTFPCVLKACS 151
Query: 160 GLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISW 219
++ G++IH +K G V + L++MY KCG L AR + D+ + +RD++SW
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDE--MSRRDVVSW 209
Query: 220 NGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQY----FD 275
N ++ YA + ++A+ + +M+ + + T LL A S+ E + Y F
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFF 267
Query: 276 KLLK------NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWG---PLL 326
K+ K N I V + A V+ R++ + + + + L G L
Sbjct: 268 KMGKKSLVSWNVMIGVYMKN-AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326
Query: 327 AGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
G +HG + KL+ +L ENA L +MYA G ++A +V MK +
Sbjct: 327 LGKKIHGYIERKKLIPNLLL----ENA-----LIDMYAKCGCLEKARDVFENMKSR 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 129/300 (43%), Gaps = 81/300 (27%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDA------------------------------ 38
+ ++M RDV SW ++V G A++ R DDA
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 39 -------RALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP----ERDMASW--- 84
+ +F +M +++VSWN MI Y +N EA+EL+ RM E D S
Sbjct: 256 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 85 --------------------------------NAMLTGFFQNGELNRAEKLFAELPQKDV 112
NA++ + + G L +A +F + +DV
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
++WT+M++ Y G +A+ +F+K+Q + GL P++ FVT L ACS L EG+ +
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQ-DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFK 434
Query: 173 LISKTGFQENTRV--VSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
L++ ++ R+ ++ ++++ + G++ A + D + + + W ++ A H
Sbjct: 435 LMTD-HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERV-WGALLGACRVHS 492
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 168 QQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
+ +H I + N+ + L+ Y+ ++ ARK+FD+ + +R++I N MI +Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE--IPERNVIIINVMIRSYV 116
Query: 228 HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK---NRSIQ 284
++G+ E + +F M + + T+ +L ACS +G + G + K + ++
Sbjct: 117 NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 285 VKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKK 344
V LV + G+ G L EA +++ + + +S W L+ G + D V ++
Sbjct: 177 VGNG----LVSMYGKCGFLSEARLVLDEMSRRDVVS-WNSLVVGYAQNQRFDDALEVCRE 231
Query: 345 I--LKVEHENAGTYSLLS 360
+ +K+ H+ SLL
Sbjct: 232 MESVKISHDAGTMASLLP 249
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 311 bits (798), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 237/376 (63%), Gaps = 3/376 (0%)
Query: 56 MITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITW 115
++ YA+ + A ++F+RMPER + S AM+T + + G + A LF + ++D+++W
Sbjct: 167 LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSW 226
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
M+ GYAQHG +AL +F K+ A G KP+ T V L ACS + +L G+ IH +
Sbjct: 227 NVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVK 286
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEA 235
+ + N +V + LI+MYSKCG L A +F+D ++D+++WN MIA YA HGY +A
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT--PRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 236 INLFNKMQEL-GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLV 294
+ LFN+MQ + G Q D+T++ L AC+HAGLV+EGI+ F+ + + I+ K +HY CLV
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLV 404
Query: 295 DLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAG 354
L GRAG+LK A+ I+ + + +W +L C +HG+ +GK +A+ ++ + +N+G
Sbjct: 405 SLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSG 464
Query: 355 TYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEM 414
Y LLSN+YASVG ++ A VR MK+KG+ K+PG S IE+ N V F GD+ HS+S+
Sbjct: 465 IYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKE 524
Query: 415 LEYLLLGLHTKMKKFG 430
+ +L + ++K G
Sbjct: 525 IYTMLRKISERIKSHG 540
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 42/261 (16%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M ER + S T M+ AK G ++ ARALFD M R++VSWN MI GYAQ+ ++AL
Sbjct: 184 FDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDAL 243
Query: 71 ELFERM-----PERDMASWNAMLTG----------------------------------- 90
LF+++ P+ D + A L+
Sbjct: 244 MLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDM 303
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ + G L A +F + P+KD++ W +M+ GYA HG S++AL++F +MQ GL+P + T
Sbjct: 304 YSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDIT 363
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGELHIARKIFDDG 209
F+ L AC+ + EG +I + + + G + L+++ + G+L A + +
Sbjct: 364 FIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN- 422
Query: 210 LLRQRDLISWNGMIAAYAHHG 230
+ D + W+ ++ + HG
Sbjct: 423 MNMDADSVLWSSVLGSCKLHG 443
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 41/298 (13%)
Query: 66 LDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQH 125
L L L R P ++ A + +G++ + LF + D+ +T+ + + +
Sbjct: 53 LRHNLLLHPRYPVLNLKLHRA----YASHGKIRHSLALFHQTIDPDLFLFTAAINTASIN 108
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
GL ++A ++ ++ ++ + PN TF ++L +CS G+ IH + K G + V
Sbjct: 109 GLKDQAFLLYVQLLSSE-INPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYV 163
Query: 186 VSALINMYSKCGELHIARKIFDDGLLR-----------------------------QRDL 216
+ L+++Y+K G++ A+K+FD R +RD+
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQANDVTYVELLTACSHAGLVDEGIQYFD 275
+SWN MI YA HG+ N+A+ LF K+ G + +++T V L+ACS G ++ G ++
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG-RWIH 282
Query: 276 KLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+K+ I++ L+D+ + G L+EA + K + W ++AG +HG
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK-DIVAWNAMIAGYAMHG 339
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 254/441 (57%), Gaps = 38/441 (8%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITG---------- 59
F+ + +V +T M+DG SGR D +L+ RM +V+ N +IT
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVC 142
Query: 60 -------------------------YAQNRRLDEALELFERMPERDMASWNAMLTGFFQN 94
Y ++ L A ++F+ MP+RD + M+ + +
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G + A +LF ++ KD + WT+M+ G ++ +AL++F +MQ + N T V V
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN-VSANEFTAVCV 261
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
L ACS L +L G+ +H + + + V +ALINMYS+CG+++ AR++F ++R +
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFR--VMRDK 319
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
D+IS+N MI+ A HG EAIN F M GF+ N VT V LL ACSH GL+D G++ F
Sbjct: 320 DVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVF 379
Query: 275 DKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
+ + + +++ + +HY C+VDL GR GRL+EA+ IE + ++ + G LL+ C +HGN
Sbjct: 380 NSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN 439
Query: 335 ADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIE 394
++G+ +AK++ + E+ ++GTY LLSN+YAS GKWKE+ +R M+D G++K+PGCS IE
Sbjct: 440 MELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
Query: 395 VGNTVQVFVVGDKSHSQSEML 415
V N + F+VGD +H E +
Sbjct: 500 VDNQIHEFLVGDIAHPHKEAI 520
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 36/266 (13%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
++ A +F+ + +V +T+M+ G+ G S + + ++ +M N L P+N +VL
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVL-PDNYVITSVLK 135
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD-------- 208
AC L ++IH + K GF + V ++ +Y K GEL A+K+FD+
Sbjct: 136 ACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVA 191
Query: 209 -----------GLLRQ----------RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGF 247
G +++ +D + W MI + N+A+ LF +MQ
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 248 QANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAF 307
AN+ T V +L+ACS G ++ G ++ ++N+ +++ L+++ R G + EA
Sbjct: 252 SANEFTAVCVLSACSDLGALELG-RWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 308 YIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ + K +S + +++G +HG
Sbjct: 311 RVFRVMRDKDVIS-YNTMISGLAMHG 335
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 306 bits (785), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 258/463 (55%), Gaps = 53/463 (11%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPE---- 78
+ +VD ++ R +FD M R + WNAMI GY+QN EAL LF M E
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 79 ------------------------------------RDMASWNAMLTGFFQNGELNRAEK 102
RD N ++ + + G+++ A +
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ----------ANGGLKPNNGTFV 152
+F ++ +D++TW +M+TGY E+AL + KMQ + LKPN+ T +
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 153 TVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR 212
T+L +C+ L++L +G++IH K + V SAL++MY+KCG L ++RK+FD +
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ--IP 579
Query: 213 QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ 272
Q+++I+WN +I AY HG G EAI+L M G + N+VT++ + ACSH+G+VDEG++
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 273 YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLS-VWGPLLAGCNV 331
F + + ++ DHYAC+VDL GRAGR+KEA+ ++ + + + W LL +
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 332 HGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 391
H N +IG++ A+ ++++E A Y LL+N+Y+S G W +A VR MK++G++K+PGCS
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 392 WIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
WIE G+ V FV GD SH QSE L L L +M+K G + D
Sbjct: 760 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPD 802
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 164/362 (45%), Gaps = 55/362 (15%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP----ER 79
T+V K G++ ++ L R++V+WN +++ QN +L EALE M E
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 80 DMASWNAMLTGF----------------FQNGELNR--------------------AEKL 103
D + +++L +NG L+ ++
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F + + + W +M+ GY+Q+ +EAL +F M+ + GL N+ T V+ AC +
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
+ + IH + K G + V + L++MYS+ G++ IA +IF G + RDL++WN MI
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF--GKMEDRDLVTWNTMI 478
Query: 224 AAYAHHGYGNEAINLFNKMQEL-----------GFQANDVTYVELLTACSHAGLVDEGIQ 272
Y + +A+ L +KMQ L + N +T + +L +C+ + +G +
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 273 YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVH 332
+KN ++ + LVD+ + G L+ + + + + K ++ W ++ +H
Sbjct: 539 IHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMH 596
Query: 333 GN 334
GN
Sbjct: 597 GN 598
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 158/358 (44%), Gaps = 58/358 (16%)
Query: 19 VSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFE---- 74
V+ T+V+ K G +FDR+ RN VSWN++I+ + + ALE F
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 75 --------------------RMPERDMAS-----------------WNAMLTGFFQNGEL 97
MPE M N ++ + + G+L
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKL 252
Query: 98 NRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGA 157
++ L +D++TW ++++ Q+ EAL+ +M G++P+ T +VL A
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPA 311
Query: 158 CSGLASLTEGQQIHQLISKTG-FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
CS L L G+++H K G EN+ V SAL++MY C ++ R++FD R+ L
Sbjct: 312 CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL 371
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQE-LGFQANDVTYVELLTACSHAGLVD--EGIQY 273
WN MIA Y+ + + EA+ LF M+E G AN T ++ AC +G E I
Sbjct: 372 --WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429
Query: 274 F---DKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
F L ++R +Q L+D+ R G++ A I + + L W ++ G
Sbjct: 430 FVVKRGLDRDRFVQ------NTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITG 480
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
W ++ + L EA+ + M G +KP+N F +L A + L + G+QIH +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 175 SKTGF-QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
K G+ ++ V + L+N+Y KCG+ K+FD + +R+ +SWN +I++
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR--ISERNQVSWNSLISSLCSFEKWE 181
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSH 263
A+ F M + + + T V ++TACS+
Sbjct: 182 MALEAFRCMLDENVEPSSFTLVSVVTACSN 211
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 263/467 (56%), Gaps = 49/467 (10%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM------------------------- 45
F++M +R+V SW +++ ++G +A +F M
Sbjct: 210 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 269
Query: 46 --------------PLRN-VVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTG 90
LRN ++ NA + YA+ R+ EA +F+ MP R++ + +M++G
Sbjct: 270 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 329
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ A +F ++ +++V++W +++ GY Q+G +EEAL +F ++ + P + +
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES-VCPTHYS 388
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGF------QENTRVVSALINMYSKCGELHIARK 204
F +L AC+ LA L G Q H + K GF +++ V ++LI+MY KCG +
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+F + +RD +SWN MI +A +GYGNEA+ LF +M E G + + +T + +L+AC HA
Sbjct: 449 VFRK--MMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
G V+EG YF + ++ + DHY C+VDL GRAG L+EA +IE + ++ +WG
Sbjct: 507 GFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGS 566
Query: 325 LLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
LLA C VH N +GK VA+K+L+VE N+G Y LLSNMYA +GKW++ NVR M+ +G+
Sbjct: 567 LLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGV 626
Query: 385 KKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGD 431
KQPGCSWI++ VF+V DKSH + + + LL L +M+ D
Sbjct: 627 TKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQD 673
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 162/263 (61%), Gaps = 3/263 (1%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N +I Y++ L++ ++F++MP+R++ +WN+++TG + G L+ A+ LF +P++D
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
TW SM++G+AQH EEAL F M G + N +F +VL ACSGL + +G Q+H L
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVL-NEYSFASVLSACSGLNDMNKGVQVHSL 177
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
I+K+ F + + SAL++MYSKCG ++ A+++FD+ + R+++SWN +I + +G
Sbjct: 178 IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE--MGDRNVVSWNSLITCFEQNGPAV 235
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
EA+++F M E + ++VT +++AC+ + G + +++KN ++
Sbjct: 236 EALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAF 295
Query: 294 VDLCGRAGRLKEAFYIIEGLGVK 316
VD+ + R+KEA +I + + ++
Sbjct: 296 VDMYAKCSRIKEARFIFDSMPIR 318
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 190/392 (48%), Gaps = 76/392 (19%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M +R++ +W ++V GL K G +D+A +LF MP R+ +WN+M++G+AQ+ R +EAL
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 71 ELFERMPER---------------------------------------DMASWNAMLTGF 91
F M + D+ +A++ +
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 92 FQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
+ G +N A+++F E+ ++V++W S++T + Q+G + EAL +F +M ++P+ T
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF-QMMLESRVEPDEVTL 256
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVS-ALINMYSKCGELHIARKIFDDGL 210
+V+ AC+ L+++ GQ++H + K N ++S A ++MY+KC + AR IFD
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 211 LR-----------------------------QRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+R +R+++SWN +IA Y +G EA++LF
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN--RSIQVKEDHYAC---LVDL 296
++ ++ +L AC+ + G+Q +LK+ + +ED L+D+
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 297 CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ G ++E + + + + +S W ++ G
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVS-WNAMIIG 467
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 38/238 (15%)
Query: 131 ALKMFTKMQANGGLKPNNGTFVTVLGAC--SGLASLTEGQQIHQLISKTGFQENTRVVSA 188
A K F K+ A+ ++ F +L +C S L+++ + +H + K+GF + +
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNR 60
Query: 189 LINMYSKCGELHIARKIFD--------------------------DGLLR---QRDLISW 219
LI+ YSKCG L R++FD D L R +RD +W
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 220 NGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
N M++ +A H EA+ F M + GF N+ ++ +L+ACS +++G+Q + K
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 280 NRSIQVKEDHY--ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
+ + D Y + LVD+ + G + +A + + +G + +S W L+ +G A
Sbjct: 181 SPFLS---DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS-WNSLITCFEQNGPA 234
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 49/191 (25%)
Query: 5 RGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSW----------- 53
+ + F +M ER+V SW ++ G ++G ++A +LF + +V
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 54 ----------------------------------NAMITGYAQNRRLDEALELFERMPER 79
N++I Y + ++E +F +M ER
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAEL----PQKDVITWTSMMTGYAQHGLSEEALKMF 135
D SWNAM+ GF QNG N A +LF E+ + D IT +++ G EE F
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYF 516
Query: 136 TKMQANGGLKP 146
+ M + G+ P
Sbjct: 517 SSMTRDFGVAP 527
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 266/453 (58%), Gaps = 44/453 (9%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
+RD+ + ++++D +K G I DAR +F +P +VVS NA+I GY+QN L+EA+ LF+
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQE 619
Query: 76 MPERDM-----------------------ASWNAMLT--GFFQNGE-------------- 96
M R + ++ +T GF GE
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Query: 97 -LNRAEKLFAELPQ-KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
+ A LF+EL K ++ WT MM+G++Q+G EEALK + +M+ +G L P+ TFVTV
Sbjct: 680 GMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL-PDQATFVTV 738
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
L CS L+SL EG+ IH LI + + LI+MY+KCG++ + ++FD+ + R+
Sbjct: 739 LRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE-MRRRS 797
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
+++SWN +I YA +GY +A+ +F+ M++ +++T++ +LTACSHAG V +G + F
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIF 857
Query: 275 DKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
+ ++ I+ + DH AC+VDL GR G L+EA IE +K +W LL C +HG+
Sbjct: 858 EMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD 917
Query: 335 ADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIE 394
G++ A+K++++E +N+ Y LLSN+YAS G W++A +R M+D+G+KK PG SWI+
Sbjct: 918 DIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWID 977
Query: 395 VGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMK 427
V +F GDKSHS+ +E L L+ MK
Sbjct: 978 VEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 161/302 (53%), Gaps = 12/302 (3%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
ER+ +VD AK RI DAR +F+ + N V W + +GY + +EA+ +FER
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 76 MPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEA 131
M + D ++ ++ + + G+L A LF E+ DV+ W M++G+ + G A
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 132 LKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALIN 191
++ F M+ + +K T +VL A +A+L G +H K G N V S+L++
Sbjct: 312 IEYFFNMRKSS-VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 192 MYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAND 251
MYSKC ++ A K+F+ L +++ + WN MI YAH+G ++ + LF M+ G+ +D
Sbjct: 371 MYSKCEKMEAAAKVFE--ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 252 VTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA--CLVDLCGRAGRLKEAFYI 309
T+ LL+ C+ + ++ G Q+ ++K + + ++ + LVD+ + G L++A I
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKK---LAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 310 IE 311
E
Sbjct: 486 FE 487
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 173/353 (49%), Gaps = 44/353 (12%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP------ 77
+VD AK G ++DAR +F+RM R+ V+WN +I Y Q+ EA +LF+RM
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVS 527
Query: 78 ---------------------------------ERDMASWNAMLTGFFQNGELNRAEKLF 104
+RD+ + ++++ + + G + A K+F
Sbjct: 528 DGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVF 587
Query: 105 AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
+ LP+ V++ +++ GY+Q+ L EEA+ +F +M G+ P+ TF T++ AC SL
Sbjct: 588 SSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTR-GVNPSEITFATIVEACHKPESL 645
Query: 165 TEGQQIHQLISKTGF-QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
T G Q H I+K GF E + +L+ MY + A +F + L + ++ W GM+
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSE-LSSPKSIVLWTGMM 704
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
+ ++ +G+ EA+ + +M+ G + T+V +L CS + EG + L+ + +
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG-RAIHSLIFHLAH 763
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ E L+D+ + G +K + + + + + ++ W L+ G +G A+
Sbjct: 764 DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 161/359 (44%), Gaps = 42/359 (11%)
Query: 38 ARALFDRMPLR--------NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLT 89
+R +FD MP R V ++I G RL NA++
Sbjct: 61 SRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLG-----------------NAIVD 103
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
+ + +++ AEK F + +KDV W SM++ Y+ G + L+ F + N + PN
Sbjct: 104 LYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ-IFPNKF 161
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
TF VL C+ ++ G+QIH + K G + N+ AL++MY+KC + AR++F+
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFE-- 219
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
+ + + W + + Y G EA+ +F +M++ G + + + +V ++ G + +
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 270 GIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR-----LKEAFYIIEGLGVKLSLSVWGP 324
F ++ D A V + G R E F+ + VK + S G
Sbjct: 280 ARLLFGEM-------SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 325 LLAGCNVHGNADIGKLVAKKILKVE-HENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
+L+ + N D+G +V + +K+ N S L +MY+ K + AA V +++K
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 131/286 (45%), Gaps = 35/286 (12%)
Query: 48 RNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAEL 107
+N+ NA++ YA+ L++A ++FERM +RD +WN ++ + Q+
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN----------- 509
Query: 108 PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEG 167
EA +F +M G+ + + L AC+ + L +G
Sbjct: 510 --------------------ESEAFDLFKRMNL-CGIVSDGACLASTLKACTHVHGLYQG 548
Query: 168 QQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
+Q+H L K G + S+LI+MYSKCG + ARK+F L + ++S N +IA Y+
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS--LPEWSVVSMNALIAGYS 606
Query: 228 HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKE 287
+ EA+ LF +M G +++T+ ++ AC + G Q+ ++ K E
Sbjct: 607 QNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 288 DHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
L+ + + + EA + L S+ +W +++G + +G
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 118/237 (49%), Gaps = 16/237 (6%)
Query: 6 GCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALF----------DRMPLRNVVSWNA 55
C + + + WT M+ G +++G ++A + D+ V+ +
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 56 MITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQK-DVIT 114
+++ + R + +F + D + N ++ + + G++ + ++F E+ ++ +V++
Sbjct: 744 VLSSLREGRAIHSL--IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVS 801
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ-L 173
W S++ GYA++G +E+ALK+F M+ + P+ TF+ VL ACS +++G++I + +
Sbjct: 802 WNSLINGYAKNGYAEDALKIFDSMR-QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
I + G + V+ ++++ + G L A + L+ D W+ ++ A HG
Sbjct: 861 IGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP-DARLWSSLLGACRIHG 916
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 26/229 (11%)
Query: 8 TMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR-NVVSWNAMITGYAQNRRL 66
++ F+ + D + T++D AK G + + +FD M R NVVSWN++I GYA+N
Sbjct: 756 SLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYA 815
Query: 67 DEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAEL-----PQKDVITWTS 117
++AL++F+ M + D ++ +LT G+++ K+F + + V
Sbjct: 816 EDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVAC 875
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT 177
M+ + G +EA F + Q LKP+ + ++LGAC G I IS
Sbjct: 876 MVDLLGRWGYLQEA-DDFIEAQ---NLKPDARLWSSLLGACR-----IHGDDIRGEISAE 926
Query: 178 GFQE----NTRVVSALINMYSKCG---ELHIARKIFDDGLLRQRDLISW 219
E N+ L N+Y+ G + + RK+ D +++ SW
Sbjct: 927 KLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSW 975
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 306 bits (783), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 231/378 (61%), Gaps = 3/378 (0%)
Query: 17 RDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM 76
++V SW +M+ K G + AR LFD+M R+ +SWN MI GY R+++A LF M
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Query: 77 PERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFT 136
P RD SWN M++G+ G + A F + P+K ++W S++ Y ++ +EA+ +F
Sbjct: 339 PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFI 398
Query: 137 KMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKC 196
+M G KP+ T ++L A +GL +L G Q+HQ++ KT + V +ALI MYS+C
Sbjct: 399 RMNIEGE-KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRC 456
Query: 197 GELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVE 256
GE+ +R+IFD+ L+ R++I+WN MI YA HG +EA+NLF M+ G + +T+V
Sbjct: 457 GEIMESRRIFDEMKLK-REVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVS 515
Query: 257 LLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVK 316
+L AC+HAGLVDE F ++ I+ + +HY+ LV++ G+ +EA YII + +
Sbjct: 516 VLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFE 575
Query: 317 LSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVR 376
+VWG LL C ++ N + + A+ + ++E E++ Y LL NMYA +G W EA+ VR
Sbjct: 576 PDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVR 635
Query: 377 MKMKDKGLKKQPGCSWIE 394
M M+ K +KK+ G SW++
Sbjct: 636 MNMESKRIKKERGSSWVD 653
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 193/421 (45%), Gaps = 60/421 (14%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQN---RRLD 67
F +++ R+ +W TM+ G K ++ AR LFD MP R+VV+WN MI+GY R L+
Sbjct: 63 FEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLE 122
Query: 68 EALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGL 127
EA +LF+ MP RD SWN M++G+ +N + A LF ++P+++ ++W++M+TG+ Q+G
Sbjct: 123 EARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGE 182
Query: 128 SEEALKMFTKMQAN---------GGLKPNN--GTFVTVLGACSGLASLTE---------- 166
+ A+ +F KM GL N VLG L S E
Sbjct: 183 VDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLI 242
Query: 167 ---GQ------------QIHQLIS-------KTGFQENTRVVSALINMYSKCGELHIARK 204
GQ QI L + F +N +++I Y K G++ AR
Sbjct: 243 VGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARL 302
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+FD ++ RD ISWN MI Y H +A LF++M + ++ +++ +
Sbjct: 303 LFDQ--MKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNM----MVSGYASV 356
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEA---FYIIEGLGVKLSLSV 321
G V+ YF+K + ++ + ++ + KEA F + G K
Sbjct: 357 GNVELARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHT 411
Query: 322 WGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKD 381
LL+ N +G + + ++K + ++ L MY+ G+ E+ + +MK
Sbjct: 412 LTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKL 471
Query: 382 K 382
K
Sbjct: 472 K 472
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 191/402 (47%), Gaps = 65/402 (16%)
Query: 26 VDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWN 85
++ + +SG I +AR +F+++ RN V+WN MI+GY + R +++A +LF+ MP+RD+ +WN
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 86 AMLTGFFQNGE---LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
M++G+ G L A KLF E+P +D +W +M++GYA++ EAL +F KM
Sbjct: 107 TMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 143 GLK--------PNNGTFVTVL------------GACSGLASLTEGQQIHQ---------- 172
+ NG + + C+ +A L + +++ +
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDD----------GLLRQR---DLISW 219
L+S G ++ + LI Y + G++ AR +FD G R+R +++SW
Sbjct: 227 LVS--GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSW 284
Query: 220 NGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
N MI AY G A LF++M++ + +++ ++ H +++ F + +
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKD----RDTISWNTMIDGYVHVSRMEDAFALFSE-MP 339
Query: 280 NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGK 339
NR + +V G ++ A + E K ++S W ++A N D +
Sbjct: 340 NRDAH----SWNMMVSGYASVGNVELARHYFEKTPEKHTVS-WNSIIAA--YEKNKDYKE 392
Query: 340 LVAKKI-LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
V I + +E E ++L S + AS G N+R+ M+
Sbjct: 393 AVDLFIRMNIEGEKPDPHTLTSLLSASTG----LVNLRLGMQ 430
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 163/381 (42%), Gaps = 100/381 (26%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRN------------------- 49
+ F +M ER+ SW+ M+ G ++G +D A LF +MP+++
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSE 216
Query: 50 ------------------VVSWNAMITGYAQNRRLDEALELFERMPE------------- 78
V ++N +I GY Q +++ A LF+++P+
Sbjct: 217 AAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRER 276
Query: 79 --RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFT 136
+++ SWN+M+ + + G++ A LF ++ +D I+W +M+ GY E+A +F+
Sbjct: 277 FCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 137 KMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKC 196
+M PN + + +++ Y+
Sbjct: 337 EM-------PN---------------------------------RDAHSWNMMVSGYASV 356
Query: 197 GELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVE 256
G + +AR F+ ++ +SWN +IAAY + EA++LF +M G + + T
Sbjct: 357 GNVELARHYFEK--TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 257 LLTACSHAGLVD--EGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLG 314
LL+A + GLV+ G+Q ++K V + L+ + R G + E+ I + +
Sbjct: 415 LLSAST--GLVNLRLGMQMHQIVVKTVIPDVPV--HNALITMYSRCGEIMESRRIFDEMK 470
Query: 315 VKLSLSVWGPLLAGCNVHGNA 335
+K + W ++ G HGNA
Sbjct: 471 LKREVITWNAMIGGYAFHGNA 491
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 109/267 (40%), Gaps = 55/267 (20%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N L ++G + A +F +L ++ +TW +M++GY + +A K+F M +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
N T ++ +C G+ L E ARK
Sbjct: 104 TWN--TMISGYVSCGGIRFLEE-----------------------------------ARK 126
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+FD+ + RD SWN MI+ YA + EA+ LF KM E N V++ ++T
Sbjct: 127 LFDE--MPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPE----RNAVSWSAMITGFCQN 180
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYAC-LVDLCGRAGRLKEAFYIIEGLGVKLS----- 318
G VD + F R + VK+ C LV + RL EA +++ G +S
Sbjct: 181 GEVDSAVVLF------RKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL 234
Query: 319 LSVWGPLLAGCNVHGNADIGKLVAKKI 345
+ + L+ G G + + + +I
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQI 261
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 260/459 (56%), Gaps = 43/459 (9%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------PE 78
++D A+ GR+ D + +FDRM +R+++SWN++I Y N + A+ LF+ M P+
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Query: 79 ----------------------------------RDMASWNAMLTGFFQNGELNRAEKLF 104
D+ NA++ + + G ++ A +F
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 105 AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
LP DVI+W ++++GYAQ+G + EA++M+ M+ G + N GT+V+VL ACS +L
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 165 TEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIA 224
+G ++H + K G + VV++L +MY KCG L A +F + + + + WN +IA
Sbjct: 468 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ--IPRVNSVPWNTLIA 525
Query: 225 AYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQ 284
+ HG+G +A+ LF +M + G + + +T+V LL+ACSH+GLVDEG F+ + + I
Sbjct: 526 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 585
Query: 285 VKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKK 344
HY C+VD+ GRAG+L+ A I+ + ++ S+WG LL+ C VHGN D+GK+ ++
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEH 645
Query: 345 ILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVV 404
+ +VE E+ G + LLSNMYAS GKW+ +R KGL+K PG S +EV N V+VF
Sbjct: 646 LFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYT 705
Query: 405 GDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLS-RDVE 442
G+++H E + L L K+K G + D +DVE
Sbjct: 706 GNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVE 744
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 186/369 (50%), Gaps = 48/369 (13%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
DV +++ ++ + +AR LFD MP+R++ SWNAMI+GY Q+ EAL L +
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 78 ERDMASWNAMLTGFFQNGELNR-----------------------------------AEK 102
D + ++L+ + G+ NR +K
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
+F + +D+I+W S++ Y + A+ +F +M+ + ++P+ T +++ S L
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS-RIQPDCLTLISLASILSQLG 362
Query: 163 SLTEGQQIHQLISKTG-FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
+ + + + G F E+ + +A++ MY+K G + AR +F+ L D+ISWN
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN--WLPNTDVISWNT 420
Query: 222 MIAAYAHHGYGNEAINLFNKMQELG-FQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN 280
+I+ YA +G+ +EAI ++N M+E G AN T+V +L ACS AG + +G++ +LLKN
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 281 RSIQVKEDHYACLVDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLLAGCNVHGNADI 337
+ + L D+ G+ GRL++A FY I +++ W L+A HG+ +
Sbjct: 481 -GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP----RVNSVPWNTLIACHGFHGHGEK 535
Query: 338 GKLVAKKIL 346
++ K++L
Sbjct: 536 AVMLFKEML 544
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 15/234 (6%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G + A F + +DV W M++GY + G S E ++ F+ + GL P+ TF +V
Sbjct: 100 GNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
L AC ++ +G +IH L K GF + V ++LI++YS+ + AR +FD+ + R
Sbjct: 160 LKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE--MPVR 214
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
D+ SWN MI+ Y G EA+ L N ++ + + VT V LL+AC+ AG + G+
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 275 DKLLKNRSIQVKEDHYAC--LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLL 326
+K+ ++ + + L+DL GRL++ + + + V+ L W ++
Sbjct: 271 SYSIKH---GLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSII 320
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 305 bits (780), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 151/388 (38%), Positives = 247/388 (63%), Gaps = 10/388 (2%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F +M ER+ SWT +V KSG +++A+++FD MP RN+ SWNA++ G ++ L A
Sbjct: 167 VFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNA 226
Query: 70 LELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSE 129
+LF+ MP+RD+ S+ +M+ G+ + G++ A LF E DV W++++ GYAQ+G
Sbjct: 227 KKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPN 286
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQI----HQLISKTGFQENTRV 185
EA K+F++M A +KP+ V ++ ACS + +++ HQ ++K + V
Sbjct: 287 EAFKVFSEMCAKN-VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS---SHYV 342
Query: 186 VSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
V ALI+M +KCG + A K+F++ + QRDL+S+ M+ A HG G+EAI LF KM +
Sbjct: 343 VPALIDMNAKCGHMDRAAKLFEE--MPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE 400
Query: 246 GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKE 305
G ++V + +L C + LV+EG++YF+ + K SI DHY+C+V+L R G+LKE
Sbjct: 401 GIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKE 460
Query: 306 AFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYAS 365
A+ +I+ + + S WG LL GC++HGN +I ++VA+ + ++E ++AG+Y LLSN+YA+
Sbjct: 461 AYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAA 520
Query: 366 VGKWKEAANVRMKMKDKGLKKQPGCSWI 393
+ +W + A++R KM + G+ K G SWI
Sbjct: 521 LDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 23/268 (8%)
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
+F +P W ++ GY+ L E + + +M G +P+ TF V+ CS
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
+ G +H L+ + GF ++ V ++ ++ Y KC +L ARK+F G + +R+ +SW +
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVF--GEMPERNAVSWTAL 182
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
+ AY G EA ++F+ M E N ++ L+ +G + + FD++ K
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPE----RNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIE---GLGVKLSLSVWGPLLAGCNVHGNAD--- 336
I Y ++D + G + A + E G+ V+ W L+ G +G +
Sbjct: 239 IS-----YTSMIDGYAKGGDMVSARDLFEEARGVDVR----AWSALILGYAQNGQPNEAF 289
Query: 337 --IGKLVAKKILKVEHENAGTYSLLSNM 362
++ AK + E G S S M
Sbjct: 290 KVFSEMCAKNVKPDEFIMVGLMSACSQM 317
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 143/335 (42%), Gaps = 56/335 (16%)
Query: 41 LFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM-------------P---------- 77
+F+R+P WN +I GY+ E + + RM P
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 78 -----------------ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMT 120
++D+ + + + + +L A K+F E+P+++ ++WT+++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 121 GYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQ 180
Y + G EEA MF M N G++ ++ L +++ + K
Sbjct: 185 AYVKSGELEEAKSMFDLMPER-----NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDII 239
Query: 181 ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFN 240
T ++I+ Y+K G++ AR +F++ R D+ +W+ +I YA +G NEA +F+
Sbjct: 240 SYT----SMIDGYAKGGDMVSARDLFEEA--RGVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 241 KMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY--ACLVDLCG 298
+M + ++ V L++ACS G E + D L R + HY L+D+
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCF-ELCEKVDSYLHQR-MNKFSSHYVVPALIDMNA 351
Query: 299 RAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ G + A + E + + L + ++ G +HG
Sbjct: 352 KCGHMDRAAKLFEEMPQR-DLVSYCSMMEGMAIHG 385
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 244/428 (57%), Gaps = 36/428 (8%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL--RNVVSWNAMITGYAQNRR-LD 67
F++M +RD S+ +M+DG K G I AR LFD MP+ +N++SWN+MI+GYAQ +D
Sbjct: 179 FDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVD 238
Query: 68 EALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWT----------- 116
A +LF MPE+D+ SWN+M+ G+ ++G + A+ LF +P++DV+TW
Sbjct: 239 IASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGF 298
Query: 117 --------------------SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
SMM GY Q+ EAL++F+ M+ L P++ T V VL
Sbjct: 299 VHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLP 358
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
A + L L++ +H I + F ++ ALI+MYSKCG + A +F+ + + +
Sbjct: 359 AIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEG--IENKSI 416
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
WN MI A HG G A ++ +++ L + +D+T+V +L ACSH+GLV EG+ F+
Sbjct: 417 DHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFEL 476
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ + I+ + HY C+VD+ R+G ++ A +IE + V+ + +W L C+ H +
Sbjct: 477 MRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFE 536
Query: 337 IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVG 396
G+LVAK ++ N +Y LLSNMYAS G WK+ VR MK++ ++K PGCSWIE+
Sbjct: 537 TGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 596
Query: 397 NTVQVFVV 404
V F V
Sbjct: 597 GRVHEFFV 604
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 154/306 (50%), Gaps = 32/306 (10%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP--QKD 111
N +I Y + L + ++F+RMP+RD S+N+M+ G+ + G + A +LF +P K+
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 112 VITWTSMMTGYAQHGLSEE-ALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQI 170
+I+W SM++GYAQ + A K+F M + N S+ +G
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWN---------------SMIDGYVK 264
Query: 171 HQLI--SKTGFQENTR--VVS--ALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIA 224
H I +K F R VV+ +I+ Y+K G +H A+ +FD + RD++++N M+A
Sbjct: 265 HGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQ--MPHRDVVAYNSMMA 322
Query: 225 AYAHHGYGNEAINLFNKMQ-ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
Y + Y EA+ +F+ M+ E +D T V +L A + G + + I +++ +
Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVE-KQF 381
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
+ L+D+ + G ++ A + EG+ K S+ W ++ G +HG +G+
Sbjct: 382 YLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK-SIDHWNAMIGGLAIHG---LGESAFD 437
Query: 344 KILKVE 349
+L++E
Sbjct: 438 MLLQIE 443
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 110 KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
+D W +++ ++ HG + + G+ + + VL ACS L + G Q
Sbjct: 84 EDPFLWNAVIKSHS-HGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQ 142
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
IH + KTG + + + LI +Y KCG L ++R++FD + +RD +S+N MI Y
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDR--MPKRDSVSYNSMIDGYVKC 200
Query: 230 GYGNEAINLFNKM 242
G A LF+ M
Sbjct: 201 GLIVSARELFDLM 213
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 301 bits (770), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 155/412 (37%), Positives = 251/412 (60%), Gaps = 3/412 (0%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
E D+ +++ +K G + +A+A+F M ++ VSWN++ITG Q +++ EA ELFE+
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEK 366
Query: 76 MPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMF 135
MP +DM SW M+ GF GE+++ +LF +P+KD ITWT+M++ + +G EEAL F
Sbjct: 367 MPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWF 426
Query: 136 TKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSK 195
KM + PN+ TF +VL A + LA L EG QIH + K + V ++L++MY K
Sbjct: 427 HKM-LQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCK 485
Query: 196 CGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYV 255
CG + A KIF + + +++S+N MI+ Y+++G+G +A+ LF+ ++ G + N VT++
Sbjct: 486 CGNTNDAYKIFS--CISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFL 543
Query: 256 ELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGV 315
LL+AC H G VD G +YF + + +I+ DHYAC+VDL GR+G L +A +I +
Sbjct: 544 ALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPC 603
Query: 316 KLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANV 375
K VWG LL+ H D+ +L AKK++++E ++A Y +LS +Y+ +GK ++ +
Sbjct: 604 KPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRI 663
Query: 376 RMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMK 427
K K +KK PG SWI + V F+ GD+S E + + L + +M+
Sbjct: 664 MNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 150/266 (56%), Gaps = 8/266 (3%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL--RNVVSWNAMITGYAQNRRLDE 68
F + E++ S+ TM+ G ++GR D+A L+ P+ R+ V+ N +++GY + + +E
Sbjct: 136 FCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNE 195
Query: 69 ALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLS 128
A+ +F+ M +++ S ++M+ G+ + G + A LF + +++VITWT+M+ GY + G
Sbjct: 196 AVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFF 255
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
E+ +F +M+ G +K N+ T + AC EG QIH L+S+ + + + ++
Sbjct: 256 EDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNS 315
Query: 189 LINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
L++MYSK G + A+ +F G+++ +D +SWN +I +EA LF KM
Sbjct: 316 LMSMYSKLGYMGEAKAVF--GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----G 369
Query: 249 ANDVTYVELLTACSHAGLVDEGIQYF 274
+ V++ +++ S G + + ++ F
Sbjct: 370 KDMVSWTDMIKGFSGKGEISKCVELF 395
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 135/252 (53%), Gaps = 25/252 (9%)
Query: 30 AKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLT 89
A++G + +A A+F +M R++VSW AMI+ YA+N ++ +A ++F+ MP R S+NAM+T
Sbjct: 61 ARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMIT 120
Query: 90 GFFQNG-ELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
+N +L +A +LF ++P+K+ +++ +M+TG+ + G +EA ++ A +K +
Sbjct: 121 AMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLY----AETPVKFRD 176
Query: 149 GTFVTVL-------GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
VL G + + +G + +++S S++++ Y K G +
Sbjct: 177 SVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVS----------CSSMVHGYCKMGRIVD 226
Query: 202 ARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQANDVTYVELLTA 260
AR +FD + +R++I+W MI Y G+ + LF +M++ G + N T + A
Sbjct: 227 ARSLFDR--MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKA 284
Query: 261 CSHAGLVDEGIQ 272
C EG Q
Sbjct: 285 CRDFVRYREGSQ 296
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 94/164 (57%), Gaps = 9/164 (5%)
Query: 3 EDRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVV----SWNAMIT 58
E C F M E+D +WT M+ +G ++A F +M + V +++++++
Sbjct: 387 EISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 59 GYAQNRRLDEALELFERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVIT 114
A L E L++ R+ + D++ N++++ + + G N A K+F+ + + ++++
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVS 506
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
+ +M++GY+ +G ++ALK+F+ ++++G +PN TF+ +L AC
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGK-EPNGVTFLALLSAC 549
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 264/469 (56%), Gaps = 50/469 (10%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARAL-------------FDRMPLRNVVS----- 52
F QM ERD+ +W +M+ G + G D RAL DR L +V+S
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGY--DLRALDIFSKMLRDSLLSPDRFTLASVLSACANL 292
Query: 53 ------------------------WNAMITGYAQNRRLDEALELFERMPERDMA--SWNA 86
NA+I+ Y++ ++ A L E+ +D+ + A
Sbjct: 293 EKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTA 352
Query: 87 MLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
+L G+ + G++N+A+ +F L +DV+ WT+M+ GY QHG EA+ +F M GG +P
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM-VGGGQRP 411
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
N+ T +L S LASL+ G+QIH K+G + V +ALI MY+K G + A + F
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 207 DDGLLR-QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
D L+R +RD +SW MI A A HG+ EA+ LF M G + + +TYV + +AC+HAG
Sbjct: 472 D--LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Query: 266 LVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPL 325
LV++G QYFD + I HYAC+VDL GRAG L+EA IE + ++ + WG L
Sbjct: 530 LVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSL 589
Query: 326 LAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
L+ C VH N D+GK+ A+++L +E EN+G YS L+N+Y++ GKW+EAA +R MKD +K
Sbjct: 590 LSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVK 649
Query: 386 KQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
K+ G SWIEV + V VF V D +H + + + + ++KK G + D
Sbjct: 650 KEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPD 698
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 181/403 (44%), Gaps = 72/403 (17%)
Query: 4 DRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDA-RALFD------------------- 43
D C F+Q+ +RD SWTTM+ G G+ A R + D
Sbjct: 97 DSTCEF-FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 44 ------------------RMPLR-NVVSWNAMITGYAQNRRLDEALELFERMPERDMASW 84
++ LR NV N+++ YA+ A +F+RM RD++SW
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
NAM+ Q G+++ A F ++ ++D++TW SM++G+ Q G AL +F+KM + L
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
P+ T +VL AC+ L L G+QIH I TGF + V++ALI+MYS+CG + AR+
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 205 IFD----------------DGL---------------LRQRDLISWNGMIAAYAHHGYGN 233
+ + DG L+ RD+++W MI Y HG
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
EAINLF M G + N T +L+ S + G Q +K+ I A L
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNA-L 454
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ + +AG + A + + + W ++ HG+A+
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 168/332 (50%), Gaps = 24/332 (7%)
Query: 58 TGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTS 117
TGYA + R +LF+ MP R SWN +L+ + + G+++ + F +LPQ+D ++WT+
Sbjct: 62 TGYALHAR-----KLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTT 116
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT 177
M+ GY G +A+++ M G++P T VL + + + G+++H I K
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDM-VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKL 175
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
G + N V ++L+NMY+KCG+ +A+ +FD ++ RD+ SWN MIA + G + A+
Sbjct: 176 GLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV--RDISSWNAMIALHMQVGQMDLAMA 233
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
F +M E + VT+ +++ + G + F K+L++ + A ++ C
Sbjct: 234 QFEQMAE----RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSAC 289
Query: 298 GRAGRL---KEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK----KILKVEH 350
+L K+ I G +S V L++ + G + + + + K LK+E
Sbjct: 290 ANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE- 348
Query: 351 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
++ L + Y +G +A N+ + +KD+
Sbjct: 349 ----GFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 26/191 (13%)
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAY 226
Q +H + K+G + +++ L+N+YSK G ARK+FD+ LR SWN +++AY
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTA--FSWNTVLSAY 90
Query: 227 AHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG-----------LVDEGIQYFD 275
+ G + F+++ Q + V++ ++ + G +V EGI+
Sbjct: 91 SKRGDMDSTCEFFDQLP----QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQ 146
Query: 276 KLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
L N V C G+ +F I LG++ ++SV LL G+
Sbjct: 147 FTLTNVLASVAATR-------CMETGKKVHSF--IVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 336 DIGKLVAKKIL 346
+ K V +++
Sbjct: 198 MMAKFVFDRMV 208
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 269/462 (58%), Gaps = 45/462 (9%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPL--RNVVSWNAMITGYAQNRRLDEALELFER 75
DV ++ AK R+ AR +F+ +PL R +VSW A+++ YAQN EALE+F +
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 76 MPERDM-ASWNAML--------------------------------------TGFFQNGE 96
M + D+ W A++ T + + G+
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
+ A+ LF ++ ++I W +M++GYA++G + EA+ MF +M N ++P+ + + +
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAIS 331
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
AC+ + SL + + +++ + ++ ++++ + SALI+M++KCG + AR +FD L RD+
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL--DRDV 389
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+ W+ MI Y HG EAI+L+ M+ G NDVT++ LL AC+H+G+V EG +F++
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR 449
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ ++ I ++ HYAC++DL GRAG L +A+ +I+ + V+ ++VWG LL+ C H + +
Sbjct: 450 MADHK-INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Query: 337 IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVG 396
+G+ A+++ ++ N G Y LSN+YA+ W A VR++MK+KGL K GCSW+EV
Sbjct: 509 LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Query: 397 NTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLS 438
++ F VGDKSH + E +E + + +++K+ G + + D S
Sbjct: 569 GRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDAS 610
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 178/356 (50%), Gaps = 50/356 (14%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP----E 78
T ++ + G I AR +FD +P + WNA+I GY++N +AL ++ M
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 79 RDMASWNAMLTG--------------------------FFQNG---------ELNRAEKL 103
D ++ +L F QNG L A +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 104 FA--ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGL 161
F LP++ +++WT++++ YAQ+G EAL++F++M+ +KP+ V+VL A + L
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR-KMDVKPDWVALVSVLNAFTCL 235
Query: 162 ASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
L +G+ IH + K G + ++ +L MY+KCG++ A+ +FD ++ +LI WN
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK--MKSPNLILWNA 293
Query: 222 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNR 281
MI+ YA +GY EAI++F++M + + ++ ++AC+ G +++ ++ + ++
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS- 352
Query: 282 SIQVKEDHY--ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
++D + + L+D+ + G ++ A + + + + VW ++ G +HG A
Sbjct: 353 --DYRDDVFISSALIDMFAKCGSVEGARLVFDRT-LDRDVVVWSAMIVGYGLHGRA 405
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 41/294 (13%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G++ A ++F +LP+ + W +++ GY+++ ++AL M++ MQ + P++ TF +
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL-ARVSPDSFTFPHL 125
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
L ACSGL+ L G+ +H + + GF + V + LI +Y+KC L AR +F+ L +R
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
++SW +++AYA +G EA+ +F++M+++ + + V V +L A
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA-------------- 231
Query: 275 DKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
+ CL DL + GR I VK+ L + LL N
Sbjct: 232 ---------------FTCLQDL--KQGR------SIHASVVKMGLEIEPDLLISLNTM-Y 267
Query: 335 ADIGKLVAKKIL--KVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
A G++ KIL K++ N ++ + + YA G +EA ++ +M +K ++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 111/227 (48%), Gaps = 10/227 (4%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRL 66
F++M+ ++ W M+ G AK+G +A +F M ++V +S + I+ AQ L
Sbjct: 280 FDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 67 DEALELFERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
++A ++E + D +A++ F + G + A +F +DV+ W++M+ GY
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY 399
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
HG + EA+ ++ M+ GG+ PN+ TF+ +L AC+ + EG ++
Sbjct: 400 GLHGRAREAISLYRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQ 458
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
+ + +I++ + G L A ++ + Q + W +++A H
Sbjct: 459 QQHYACVIDLLGRAGHLDQAYEVI-KCMPVQPGVTVWGALLSACKKH 504
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 127 LSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV 186
+SE + + N G+ ++ + +++ + + A L +QIH + G Q + ++
Sbjct: 1 MSEASCLASPLLYTNSGIH-SDSFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLI 56
Query: 187 SALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG 246
+ LI+ S G++ AR++FDD L + + WN +I Y+ + + +A+ +++ MQ
Sbjct: 57 TKLIHASSSFGDITFARQVFDD--LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 247 FQANDVTYVELLTACS 262
+ T+ LL ACS
Sbjct: 115 VSPDSFTFPHLLKACS 130
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 299 bits (766), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 237/385 (61%), Gaps = 2/385 (0%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA 82
TT++ G ++ AR +FD M N+V+WNA+IT + + A E+F++M R+
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHT 204
Query: 83 SWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
SWN ML G+ + GEL A+++F+E+P +D ++W++M+ G A +G E+ F ++Q
Sbjct: 205 SWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQ-RA 263
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA 202
G+ PN + VL ACS S G+ +H + K G+ V +ALI+MYS+CG + +A
Sbjct: 264 GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMA 323
Query: 203 RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
R +F+ G+ +R ++SW MIA A HG G EA+ LFN+M G + ++++ LL ACS
Sbjct: 324 RLVFE-GMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
Query: 263 HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
HAGL++EG YF ++ + I+ + +HY C+VDL GR+G+L++A+ I + + + VW
Sbjct: 383 HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 323 GPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
LL C+ HGN ++ + V +++ +++ N+G LLSN YA+ GKWK+ A++R M +
Sbjct: 443 RTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQ 502
Query: 383 GLKKQPGCSWIEVGNTVQVFVVGDK 407
+KK S +EVG T+ F G+K
Sbjct: 503 RIKKTTAWSLVEVGKTMYKFTAGEK 527
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 43/281 (15%)
Query: 6 GCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRR 65
G F++M R+ +SW M+ G K+G ++ A+ +F MP R+ VSW+ MI G A N
Sbjct: 190 GAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGS 249
Query: 66 LDEALELFERMPERDMA----------------------------------SW-----NA 86
+E+ F + M+ SW NA
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNA 309
Query: 87 MLTGFFQNGELNRAEKLFAELPQKD-VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
++ + + G + A +F + +K +++WTSM+ G A HG EEA+++F +M A G+
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY-GVT 368
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGELHIARK 204
P+ +F+++L ACS + EG+ + + + ++++Y + G+L A
Sbjct: 369 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 428
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
F + I W ++ A + HG A + ++ EL
Sbjct: 429 -FICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNEL 468
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 120/305 (39%), Gaps = 71/305 (23%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
L A +L P+ D + +++ GY++ ++ +F +M G + P++ +F V+
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
A SL G Q+H K G + + V + LI MY CG + ARK+FD+ + Q +L
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDE--MHQPNL 172
Query: 217 ISWNG-------------------------------MIAAYAHHGYGNEAINLFNKMQEL 245
++WN M+A Y G A +F++M
Sbjct: 173 VAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMP-- 230
Query: 246 GFQANDVTYVELLTACSHAGLVDEGIQYFDKL----LKNRSIQVKEDHYAC--------- 292
+DV++ ++ +H G +E YF +L + + + AC
Sbjct: 231 --HRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
Query: 293 ---------------------LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNV 331
L+D+ R G + A + EG+ K + W ++AG +
Sbjct: 289 KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAM 348
Query: 332 HGNAD 336
HG +
Sbjct: 349 HGQGE 353
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 255/445 (57%), Gaps = 40/445 (8%)
Query: 23 TTMVDGLAKSGRIDDARALFDRM-PLRNVVSWNAMITGYAQNRRLDEALELFERMP---- 77
T ++ +K + DA LF + + NVVSW AMI+G+ QN +EA++LF M
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 78 -------------------------------ERDMASWNAMLTGFFQNGELNRAEKLFAE 106
ER A+L + + G++ A K+F+
Sbjct: 394 RPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 453
Query: 107 LPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGL-ASLT 165
+ KD++ W++M+ GYAQ G +E A+KMF ++ GG+KPN TF ++L C+ AS+
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMG 512
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
+G+Q H K+ + V SAL+ MY+K G + A ++F R++DL+SWN MI+
Sbjct: 513 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ--REKDLVSWNSMISG 570
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
YA HG +A+++F +M++ + + VT++ + AC+HAGLV+EG +YFD ++++ I
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
++H +C+VDL RAG+L++A +IE + ++W +LA C VH ++G+L A+KI
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVG 405
+ ++ E++ Y LLSNMYA G W+E A VR M ++ +KK+PG SWIEV N F+ G
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAG 750
Query: 406 DKSHSQSEMLEYLLLGLHTKMKKFG 430
D+SH + + L L T++K G
Sbjct: 751 DRSHPLKDQIYMKLEDLSTRLKDLG 775
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 189/406 (46%), Gaps = 68/406 (16%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
DVS T++VD K D R +FD M RNVV+W +I+GYA+N DE L LF RM
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 78 ---------------------------------------ERDMASWNAMLTGFFQNGELN 98
++ + N+++ + + G +
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 246
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
+A LF + K V+TW SM++GYA +GL EAL MF M+ N ++ + +F +V+ C
Sbjct: 247 KARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY-VRLSESSFASVIKLC 305
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD-GLLRQRDLI 217
+ L L +Q+H + K GF + + +AL+ YSKC + A ++F + G + +++
Sbjct: 306 ANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV--GNVV 363
Query: 218 SWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS-------HAGLVDEG 270
SW MI+ + + EA++LF++M+ G + N+ TY +LTA HA +V
Sbjct: 364 SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTN 423
Query: 271 IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCN 330
+ RS V L+D + G+++EA + G+ K + W +LAG
Sbjct: 424 YE--------RSSTVG----TALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYA 470
Query: 331 VHGNAD-----IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKE 371
G + G+L I E + ++ + AS+G+ K+
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQ 516
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 140/263 (53%), Gaps = 15/263 (5%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALF----------DRMPLRNVVSWNAMITGY 60
F++ RD S+ +++ G ++ GR +A+ LF D +V+ +A +
Sbjct: 50 FDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDE 109
Query: 61 AQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMT 120
R+L F + D++ +++ + + K+F E+ +++V+TWT++++
Sbjct: 110 LFGRQLHCQCIKFGFLD--DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLIS 167
Query: 121 GYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQ 180
GYA++ +++E L +F +MQ N G +PN+ TF LG + G Q+H ++ K G
Sbjct: 168 GYARNSMNDEVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 181 ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFN 240
+ V ++LIN+Y KCG + AR +FD ++ +++WN MI+ YA +G EA+ +F
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKS--VVTWNSMISGYAANGLDLEALGMFY 284
Query: 241 KMQELGFQANDVTYVELLTACSH 263
M+ + ++ ++ ++ C++
Sbjct: 285 SMRLNYVRLSESSFASVIKLCAN 307
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 128/247 (51%), Gaps = 11/247 (4%)
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
G + L A LF + P +D ++ S++ G+++ G ++EA ++F + G++ +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIH-RLGMEMDCS 94
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
F +VL + L G+Q+H K GF ++ V ++L++ Y K RK+FD+
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE- 153
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
+++R++++W +I+ YA + +E + LF +MQ G Q N T+ L + G+
Sbjct: 154 -MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 270 GIQYFDKLLKN---RSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLL 326
G+Q ++KN ++I V L++L + G +++A + + VK S+ W ++
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNS----LINLYLKCGNVRKARILFDKTEVK-SVVTWNSMI 267
Query: 327 AGCNVHG 333
+G +G
Sbjct: 268 SGYAANG 274
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 123/255 (48%), Gaps = 43/255 (16%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
ER + T ++D K G++++A +F + +++V+W+AM+ GYAQ + A+++F
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 76 MP----------------------------------------ERDMASWNAMLTGFFQNG 95
+ + + +A+LT + + G
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKG 544
Query: 96 ELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL 155
+ AE++F +KD+++W SM++GYAQHG + +AL +F +M+ +K + TF+ V
Sbjct: 545 NIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR-KVKMDGVTFIGVF 603
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRV-VSALINMYSKCGELHIARKIFDDGLLRQR 214
AC+ + EG++ ++ + T+ S ++++YS+ G+L A K+ ++ +
Sbjct: 604 AACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIEN-MPNPA 662
Query: 215 DLISWNGMIAAYAHH 229
W ++AA H
Sbjct: 663 GSTIWRTILAACRVH 677
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 298 bits (762), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 265/459 (57%), Gaps = 42/459 (9%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------ 76
T +VD AK G ++ AR LFD M RNVVSWN+MI Y QN EA+ +F++M
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 77 P---------------------------------ERDMASWNAMLTGFFQNGELNRAEKL 103
P +R+++ N++++ + + E++ A +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F +L + +++W +M+ G+AQ+G +AL F++M++ +KP+ T+V+V+ A + L+
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT-VKPDTFTYVSVITAIAELSI 453
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
+ IH ++ ++ +N V +AL++MY+KCG + IAR IFD ++ +R + +WN MI
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFD--MMSERHVTTWNAMI 511
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
Y HG+G A+ LF +MQ+ + N VT++ +++ACSH+GLV+ G++ F + +N SI
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSI 571
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
++ DHY +VDL GRAGRL EA+ I + VK +++V+G +L C +H N + + A+
Sbjct: 572 ELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAE 631
Query: 344 KILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFV 403
++ ++ ++ G + LL+N+Y + W++ VR+ M +GL+K PGCS +E+ N V F
Sbjct: 632 RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFF 691
Query: 404 VGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLSRDVE 442
G +H S+ + L L +K+ G + D +L VE
Sbjct: 692 SGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVE 730
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 177/360 (49%), Gaps = 54/360 (15%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D+ + T + + AK ++++AR +FDRMP R++VSWN ++ GY+QN ALE+ + M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 78 ERDMASW-------------------------NAMLTGF--------------FQNGELN 98
E ++ AM +GF + G L
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
A +LF + +++V++W SM+ Y Q+ +EA+ +F KM + G+KP + + + L AC
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM-LDEGVKPTDVSVMGALHAC 347
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ L L G+ IH+L + G N VV++LI+MY KC E+ A +F G L+ R L+S
Sbjct: 348 ADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF--GKLQSRTLVS 405
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVD-----EGIQY 273
WN MI +A +G +A+N F++M+ + + TYV ++TA + + G+
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 274 FDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
L KN + LVD+ + G + A I + + + ++ W ++ G HG
Sbjct: 466 RSCLDKNVFVT------TALVDMYAKCGAIMIARLIFDMMSER-HVTTWNAMIDGYGTHG 518
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 155/294 (52%), Gaps = 43/294 (14%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------ 76
T +V + G +D+A +F+ + + V ++ M+ G+A+ LD+AL+ F RM
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 77 P---------------------------------ERDMASWNAMLTGFFQNGELNRAEKL 103
P D+ + + + + ++N A K+
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F +P++D+++W +++ GY+Q+G++ AL+M M LKP+ T V+VL A S L
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM-CEENLKPSFITIVSVLPAVSALRL 251
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
++ G++IH ++GF + +AL++MY+KCG L AR++F DG+L +R+++SWN MI
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF-DGML-ERNVVSWNSMI 309
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
AY + EA+ +F KM + G + DV+ + L AC+ G ++ G ++ KL
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKL 362
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 258/458 (56%), Gaps = 47/458 (10%)
Query: 24 TMVDGLAKS---GRIDDARALFDRMPLRNVVSWNAMITGYAQNRRL-DEALELFERM--- 76
++VD AK G +DD R +FDRM +V+SW A+ITGY +N L EA+ LF M
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 77 ----------------------P-----------ERDMAS----WNAMLTGFFQNGELNR 99
P +R +AS N++++ F ++ +
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS 159
A++ F L +K+++++ + + G ++ E+A K+ +++ L + TF ++L +
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE-LGVSAFTFASLLSGVA 485
Query: 160 GLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISW 219
+ S+ +G+QIH + K G N V +ALI+MYSKCG + A ++F+ + R++ISW
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN--FMENRNVISW 543
Query: 220 NGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
MI +A HG+ + FN+M E G + N+VTYV +L+ACSH GLV EG ++F+ + +
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
Query: 280 NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGK 339
+ I+ K +HYAC+VDL RAG L +AF I + + + VW L C VH N ++GK
Sbjct: 604 DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGK 663
Query: 340 LVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTV 399
L A+KIL+++ Y LSN+YA GKW+E+ +R KMK++ L K+ GCSWIEVG+ +
Sbjct: 664 LAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKI 723
Query: 400 QVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDL 437
F VGD +H + + L L T++K+ G + D DL
Sbjct: 724 HKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDL 761
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 189/426 (44%), Gaps = 56/426 (13%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFD---RMPLRNVVSWNAMITGYAQNRRLDEALEL 72
E D + +++ +KSG A +F+ R R+VVSW+AM+ Y N R +A+++
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 73 FERMPERDM------------ASWNA-------------MLTGFFQN------------- 94
F E + A N+ M TG F++
Sbjct: 154 FVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 95 -GE--LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
GE A K+F ++ + +V+TWT M+T Q G EA++ F M + G + + T
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS-GFESDKFTL 272
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKC---GELHIARKIFDD 208
+V AC+ L +L+ G+Q+H ++G ++ V +L++MY+KC G + RK+FD
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 209 GLLRQRDLISWNGMIAAYAHH-GYGNEAINLFNKMQELG-FQANDVTYVELLTACSHAGL 266
+ ++SW +I Y + EAINLF++M G + N T+ AC +
Sbjct: 331 --MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 267 VDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLL 326
G Q + K R + ++ + ++ R+++A E L K +S L
Sbjct: 389 PRVGKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLD 447
Query: 327 AGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK- 385
C KL+++ + +A T++ L + A+VG ++ + ++ GL
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSC 507
Query: 386 KQPGCS 391
QP C+
Sbjct: 508 NQPVCN 513
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 138 MQANGGLKP-NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKC 196
+ A G++P ++ TF ++L +C G+ +H + + + ++ + ++LI++YSK
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 197 GELHIARKIFDD-GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYV 255
G+ A +F+ +RD++SW+ M+A Y ++G +AI +F + ELG ND Y
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 256 ELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGV 315
++ ACS++ V G L+K + L+D+ + E Y +
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 316 KLSLSVWGPLLAGC 329
+L++ W ++ C
Sbjct: 231 ELNVVTWTLMITRC 244
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 295 bits (755), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 261/474 (55%), Gaps = 44/474 (9%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F++M RD+ SW MV+G A+ G +++AR LFD M ++ SW AM+TGY + + +EA
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 70 LELF---ERMP-------------------------------------ERDMASWNAMLT 89
L L+ +R+P + D W++++
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
+ + G ++ A +F ++ +KDV++WTSM+ Y + E +F+++ + +PN
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE-RPNEY 320
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
TF VL AC+ L + G+Q+H +++ GF + S+L++MY+KCG + A+ + D
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDG- 379
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
+ DL+SW +I A +G +EA+ F+ + + G + + VT+V +L+AC+HAGLV++
Sbjct: 380 -CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEK 438
Query: 270 GIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGC 329
G+++F + + + DHY CLVDL R+GR ++ +I + +K S +W +L GC
Sbjct: 439 GLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGC 498
Query: 330 NVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPG 389
+ +GN D+ + A+++ K+E EN TY ++N+YA+ GKW+E +R +M++ G+ K+PG
Sbjct: 499 STYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPG 558
Query: 390 CSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLS-RDVE 442
SW E+ VF+ D SH + L L KMK+ G + L DVE
Sbjct: 559 SSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVE 612
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 155/291 (53%), Gaps = 12/291 (4%)
Query: 50 VVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQ 109
+V WN ++ YA+ L +A ++F+ MP RD+ SWN M+ G+ + G L A KLF E+ +
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 110 KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
KD +WT+M+TGY + EEAL +++ MQ +PN T + A + + + G++
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
IH I + G + + S+L++MY KCG + AR IFD + ++D++SW MI Y
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDK--IVEKDVVSWTSMIDRYFKS 297
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH 289
E +LF+++ + N+ T+ +L AC+ D + K + +V D
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACA-----DLTTEELGKQVHGYMTRVGFDP 352
Query: 290 Y----ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
Y + LVD+ + G ++ A ++++G K L W L+ GC +G D
Sbjct: 353 YSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPD 402
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
KP T+ ++ CS +L EG+++H+ I +GF + + L+ MY+KCG L ARK
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE 244
+FD+ + RDL SWN M+ YA G EA LF++M E
Sbjct: 142 VFDE--MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 267/456 (58%), Gaps = 43/456 (9%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
D+ T+++ AK G +++AR +F++MP R+ V+W +I+GY+Q+ R +AL F +M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 77 -------------------PER-------------------DMASWNAMLTGFFQNGELN 98
ER ++ +A+L + + G ++
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
A+ +F L ++ ++W +++ G+A+ +E+AL++F M +G +P++ ++ ++ GAC
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG-FRPSHFSYASLFGAC 272
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
S L +G+ +H + K+G + + L++MY+K G +H ARKIFD L +RD++S
Sbjct: 273 SSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR--LAKRDVVS 330
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
WN ++ AYA HG+G EA+ F +M+ +G + N+++++ +LTACSH+GL+DEG Y++ L+
Sbjct: 331 WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE-LM 389
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
K I + HY +VDL GRAG L A IE + ++ + ++W LL C +H N ++G
Sbjct: 390 KKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELG 449
Query: 339 KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNT 398
A+ + +++ ++ G + +L N+YAS G+W +AA VR KMK+ G+KK+P CSW+E+ N
Sbjct: 450 AYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENA 509
Query: 399 VQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
+ +FV D+ H Q E + + K+K+ G + D
Sbjct: 510 IHMFVANDERHPQREEIARKWEEVLAKIKELGYVPD 545
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 97/191 (50%), Gaps = 11/191 (5%)
Query: 142 GGLKPNNGTFV-TVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELH 200
G P + F T+L C+ L +G+ +H I ++ F+ + + + L+NMY+KCG L
Sbjct: 53 GSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLE 112
Query: 201 IARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA 260
ARK+F+ + QRD ++W +I+ Y+ H +A+ FN+M G+ N+ T ++ A
Sbjct: 113 EARKVFEK--MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 261 CSHAGLVDEGIQYFDKLLK---NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKL 317
+ G Q +K + ++ V + L+DL R G + +A + + L +
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVG----SALLDLYTRYGLMDDAQLVFDALESRN 226
Query: 318 SLSVWGPLLAG 328
+S W L+AG
Sbjct: 227 DVS-WNALIAG 236
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 251/451 (55%), Gaps = 42/451 (9%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER--- 79
+ ++D AK G++D A + R ++VVSW MI GY Q D+AL F +M +R
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 80 ------------------------------------DMASWNAMLTGFFQNGELNRAEKL 103
D+ NA++T + + G++ +
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F + D I W ++++G+ Q G +EEAL++F +M G + NN TF + + A S A+
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG-IDNNNFTFGSAVKAASETAN 707
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
+ +G+Q+H +I+KTG+ T V +ALI+MY+KCG + A K F + + ++ +SWN +I
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLE--VSTKNEVSWNAII 765
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
AY+ HG+G+EA++ F++M + N VT V +L+ACSH GLVD+GI YF+ + +
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
K +HY C+VD+ RAG L A I+ + +K VW LL+ C VH N +IG+ A
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 885
Query: 344 KILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFV 403
+L++E E++ TY LLSN+YA KW R KMK+KG+KK+PG SWIEV N++ F
Sbjct: 886 HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 945
Query: 404 VGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
VGD++H ++ + L + + G + D
Sbjct: 946 VGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 182/376 (48%), Gaps = 59/376 (15%)
Query: 5 RGCTMAFNQMQE----------RDVSS-WTTMVDGLAKSGRIDDARALFDRMPLRNVVSW 53
RG ++AF+ +++ RD + ++D +++G +D AR +FD + L++ SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 54 NAMITGYAQNRRLDEALELFERM--------P---------------------------- 77
AMI+G ++N EA+ LF M P
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 78 ---ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKM 134
D NA+++ +F G L AE +F+ + Q+D +T+ +++ G +Q G E+A+++
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 135 FTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYS 194
F +M +G L+P++ T +++ ACS +L GQQ+H +K GF N ++ AL+N+Y+
Sbjct: 377 FKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 195 KCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTY 254
KC ++ A F + +++ WN M+ AY + +F +MQ N TY
Sbjct: 436 KCADIETALDYFLET--EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 255 VELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC--LVDLCGRAGRLKEAFYIIEG 312
+L C G ++ G Q +++K + + Y C L+D+ + G+L A+ I+
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKT---NFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 313 LGVKLSLSVWGPLLAG 328
K +S W ++AG
Sbjct: 551 FAGKDVVS-WTTMIAG 565
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 184/424 (43%), Gaps = 77/424 (18%)
Query: 33 GRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMAS--------- 83
G + A +FD MP R + +WN MI A + E LF RM ++
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 84 -------------------------------WNAMLTGFFQNGELNRAEKLFAELPQKDV 112
N ++ + +NG ++ A ++F L KD
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
+W +M++G +++ EA+++F M G+ P F +VL AC + SL G+Q+H
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
L+ K GF +T V +AL+++Y G L A IF + + QRD +++N +I + GYG
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN--MSQRDAVTYNTLINGLSQCGYG 370
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ---YFDKL------------ 277
+A+ LF +M G + + T L+ ACS G + G Q Y KL
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 278 ----LKNRSIQVKEDHYA-----------CLVDLCGRAGRLKEAFYIIEGLGVKLSLS-- 320
K I+ D++ ++ G L+ +F I + ++ +
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 321 -VWGPLLAGCNVHGNADIGKLVAKKILKVEHE-NAGTYSLLSNMYASVGKWKEAANVRMK 378
+ +L C G+ ++G+ + +I+K + NA S+L +MYA +GK A ++ ++
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 379 MKDK 382
K
Sbjct: 551 FAGK 554
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 123/259 (47%), Gaps = 13/259 (5%)
Query: 63 NRRLDEALELFERMPERDMASWNAMLTGFFQ----NGELNRAEKLFAELPQKDVITWTSM 118
N LDE +L ++ + + S + F G+L A K+F E+P++ + TW M
Sbjct: 98 NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 119 MTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC-SGLASLTEGQQIHQLISKT 177
+ A L E +F +M + + PN GTF VL AC G + +QIH I
Sbjct: 158 IKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
G +++T V + LI++YS+ G + +AR++FD LR +D SW MI+ + + EAI
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDG--LRLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC--LVD 295
LF M LG + +L+AC ++ G Q +LK + D Y C LV
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK---LGFSSDTYVCNALVS 331
Query: 296 LCGRAGRLKEAFYIIEGLG 314
L G L A +I +
Sbjct: 332 LYFHLGNLISAEHIFSNMS 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 123/259 (47%), Gaps = 14/259 (5%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNR 64
+AF Q + D +W +V G +SG ++A +F RM N ++ + + ++
Sbjct: 647 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 706
Query: 65 RLDEALELFERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMT 120
+ + ++ + + S NA+++ + + G ++ AEK F E+ K+ ++W +++
Sbjct: 707 NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766
Query: 121 GYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEG-QQIHQLISKTGF 179
Y++HG EAL F +M + ++PN+ T V VL ACS + + +G + S+ G
Sbjct: 767 AYSKHGFGSEALDSFDQM-IHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
+++M ++ G L A++ + ++ D + W +++A H N I F
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKP-DALVWRTLLSACVVH--KNMEIGEF 882
Query: 240 NKMQELGFQAND-VTYVEL 257
L + D TYV L
Sbjct: 883 AAHHLLELEPEDSATYVLL 901
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 268/478 (56%), Gaps = 60/478 (12%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRL 66
F+ M +DV SW MV G ++ GR +DA LF++M +VV+W+A I+GYAQ
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 67 DEALELFERMPERDM--------------ASWNAMLTG-------------FFQNG---- 95
EAL + +M + AS A++ G +NG
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDE 406
Query: 96 ---------------ELNRAEKLFAELPQK--DVITWTSMMTGYAQHGLSEEALKMFTKM 138
+++ A +F L K DV+TWT M+ GY+QHG + +AL++ ++M
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 139 -QANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTR---VVSALINMYS 194
+ + +PN T L AC+ LA+L G+QIH + Q+N V + LI+MY+
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSNCLIDMYA 524
Query: 195 KCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTY 254
KCG + AR +FD+ + ++ ++W ++ Y HGYG EA+ +F++M+ +GF+ + VT
Sbjct: 525 KCGSISDARLVFDN--MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTL 582
Query: 255 VELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLG 314
+ +L ACSH+G++D+G++YF+++ + +HYACLVDL GRAGRL A +IE +
Sbjct: 583 LVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP 642
Query: 315 VKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAAN 374
++ VW L+ C +HG ++G+ A+KI ++ + G+Y+LLSN+YA+ G+WK+
Sbjct: 643 MEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTR 702
Query: 375 VRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDI 432
+R M+ KG+KK+PGCSW+E F VGDK+H ++ + +LL ++K G +
Sbjct: 703 IRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYV 760
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 185/376 (49%), Gaps = 55/376 (14%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP------------------------ 46
F++M DV SW ++++ AK G+ A +F RM
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 47 ----------------LRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTG 90
++N+ N ++ YA+ +DEA +F M +D+ SWNAM+ G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 91 FFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
+ Q G A +LF ++ ++ DV+TW++ ++GYAQ GL EAL + +M ++G +KP
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG-IKP 363
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQL-------ISKTGFQENTRVVSALINMYSKCGEL 199
N T ++VL C+ + +L G++IH + K G + V++ LI+MY+KC ++
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ--ANDVTYVEL 257
AR +FD ++RD+++W MI Y+ HG N+A+ L ++M E Q N T
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 258 LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKL 317
L AC+ + G Q L+N+ V CL+D+ + G + +A + + + K
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 318 SLSVWGPLLAGCNVHG 333
++ W L+ G +HG
Sbjct: 544 EVT-WTSLMTGYGMHG 558
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 174/392 (44%), Gaps = 95/392 (24%)
Query: 33 GRIDDARALFDRMPLRN--VVSWNAMITGYAQNRRLDEALELFERM------PER----- 79
G + A +L R P + V WN++I Y N ++ L LF M P+
Sbjct: 73 GCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPF 132
Query: 80 --------------DMASWNAMLTGFFQN--------------GELNRAEKLFAELPQKD 111
+ A +++TGF N L+ A K+F E+ D
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192
Query: 112 VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIH 171
V++W S++ YA+ G + AL+MF++M G +P+N T V VL C+ L + + G+Q+H
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 172 QLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGY 231
+ +N V + L++MY+KCG + A +F + + +D++SWN M+A Y+ G
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSN--MSVKDVVSWNAMVAGYSQIGR 310
Query: 232 GNEAINLFNKMQE---------------------LGFQA--------------NDVTYVE 256
+A+ LF KMQE LG++A N+VT +
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 257 LLTACSHAGLVDEG-------IQYFDKLLKN----RSIQVKEDHYACLVDLCGRAGRLKE 305
+L+ C+ G + G I+Y L KN ++ + + L+D+ + ++
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ-----LIDMYAKCKKVDT 425
Query: 306 AFYIIEGLGVK-LSLSVWGPLLAGCNVHGNAD 336
A + + L K + W ++ G + HG+A+
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 13/306 (4%)
Query: 87 MLTGFFQNGELNRAEKLFAELPQKD--VITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
+++ + G L+ A L P D V W S++ Y +G + + L +F M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS-W 123
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
P+N TF V AC ++S+ G+ H L TGF N V +AL+ MYS+C L ARK
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSH 263
+FD+ + D++SWN +I +YA G A+ +F++M E G + +++T V +L C+
Sbjct: 184 VFDE--MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYA--CLVDLCGRAGRLKEAFYIIEGLGVKLSLSV 321
G G Q + + IQ + + CLVD+ + G + EA + + VK +S
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQ---NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS- 297
Query: 322 WGPLLAGCNVHGN-ADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
W ++AG + G D +L K + + T+S + YA G EA V +M
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 381 DKGLKK 386
G+K
Sbjct: 358 SSGIKP 363
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 243/405 (60%), Gaps = 4/405 (0%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA 82
TT++D + +GRI +AR +FD MP R+ ++W M++ Y + +D A L +M E++ A
Sbjct: 908 TTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEA 967
Query: 83 SWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
+ N ++ G+ G L +AE LF ++P KD+I+WT+M+ GY+Q+ EA+ +F KM G
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA 202
+ P+ T TV+ AC+ L L G+++H + GF + + SAL++MYSKCG L A
Sbjct: 1028 -IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERA 1086
Query: 203 RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
+F + L +++L WN +I A HG+ EA+ +F KM+ + N VT+V + TAC+
Sbjct: 1087 LLVFFN--LPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACT 1144
Query: 263 HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
HAGLVDEG + + ++ + SI +HY +V L +AG + EA +I + + + +W
Sbjct: 1145 HAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIW 1204
Query: 323 GPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
G LL GC +H N I ++ K++ +E N+G Y LL +MYA +W++ A +R +M++
Sbjct: 1205 GALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMREL 1264
Query: 383 GLKK-QPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKM 426
G++K PG S I + +F DKSHS S+ + LL ++ +M
Sbjct: 1265 GIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQM 1309
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 126/273 (46%), Gaps = 72/273 (26%)
Query: 5 RGCTMAFNQMQERDVSSWTTMV-------------------------------DGLAKSG 33
R F++M ERD +WTTMV +G G
Sbjct: 921 REARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLG 980
Query: 34 RIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER-------------- 79
++ A +LF++MP+++++SW MI GY+QN+R EA+ +F +M E
Sbjct: 981 NLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVIS 1040
Query: 80 -------------------------DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVIT 114
D+ +A++ + + G L RA +F LP+K++
Sbjct: 1041 ACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFC 1100
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ-L 173
W S++ G A HG ++EALKMF KM+ +KPN TFV+V AC+ + EG++I++ +
Sbjct: 1101 WNSIIEGLAAHGFAQEALKMFAKMEME-SVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
I N +++++SK G ++ A ++
Sbjct: 1160 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELI 1192
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 150/368 (40%), Gaps = 74/368 (20%)
Query: 79 RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM 138
+D N +T L+ A ++ + +V + ++ G+ +L+++ +M
Sbjct: 803 QDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRM 862
Query: 139 QANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGE 198
+ + P++ T+ +++ A S + E Q H I K GF + ++ + LI+ YS G
Sbjct: 863 LRDS-VSPSSYTYSSLVKASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGR 919
Query: 199 LHIARKIFDDGLLRQRDLISWNGMIAAY-----------------------------AHH 229
+ ARK+FD+ + +RD I+W M++AY +
Sbjct: 920 IREARKVFDE--MPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYM 977
Query: 230 GYGN--EAINLFN-------------------------------KMQELGFQANDVTYVE 256
G GN +A +LFN KM E G ++VT
Sbjct: 978 GLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMST 1037
Query: 257 LLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY--ACLVDLCGRAGRLKEAFYIIEGLG 314
+++AC+H G+++ G + L+N + D Y + LVD+ + G L+ A + L
Sbjct: 1038 VISACAHLGVLEIGKEVHMYTLQNGFVL---DVYIGSALVDMYSKCGSLERALLVFFNLP 1094
Query: 315 VKLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAA 373
K +L W ++ G HG A K+ AK ++ NA T+ + G E
Sbjct: 1095 KK-NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 1153
Query: 374 NVRMKMKD 381
+ M D
Sbjct: 1154 RIYRSMID 1161
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 234/363 (64%), Gaps = 3/363 (0%)
Query: 46 PLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFA 105
P +VV+ NA+I Y + L +A ++F+ M ERD+ SWN++L+G+ + G++ +A+ LF
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ K +++WT+M++GY G EA+ F +MQ G++P+ + ++VL +C+ L SL
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL-AGIEPDEISLISVLPSCAQLGSLE 258
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G+ IH + GF + T V +ALI MYSKCG + A ++F G + +D+ISW+ MI+
Sbjct: 259 LGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF--GQMEGKDVISWSTMISG 316
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
YA+HG + AI FN+MQ + N +T++ LL+ACSH G+ EG++YFD + ++ I+
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
K +HY CL+D+ RAG+L+ A I + + +K +WG LL+ C GN D+ + +
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHL 436
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVG 405
+++E E+ G Y LL+N+YA +GKW++ + +R ++++ +KK PG S IEV N VQ FV G
Sbjct: 437 VELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSG 496
Query: 406 DKS 408
D S
Sbjct: 497 DNS 499
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 121/237 (51%), Gaps = 43/237 (18%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F++M ERDV SW +++ G A+ G++ A+ LF M + +VSW AMI+GY EA
Sbjct: 166 VFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEA 225
Query: 70 LELFERM------PER----------------DMASW-----------------NAMLTG 90
++ F M P+ ++ W NA++
Sbjct: 226 MDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEM 285
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ + G +++A +LF ++ KDVI+W++M++GYA HG + A++ F +MQ +KPN T
Sbjct: 286 YSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQ-RAKVKPNGIT 344
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV--VSALINMYSKCGELHIARKI 205
F+ +L ACS + EG + ++ + +Q ++ LI++ ++ G+L A +I
Sbjct: 345 FLGLLSACSHVGMWQEGLRYFDMM-RQDYQIEPKIEHYGCLIDVLARAGKLERAVEI 400
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 145/309 (46%), Gaps = 38/309 (12%)
Query: 96 ELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL 155
+++ A +LF ++ +V + S++ Y + L + ++++ ++ P+ TF +
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
+C+ L S G+Q+H + K G + + +ALI+MY K +L A K+FD+ + +RD
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDE--MYERD 174
Query: 216 LISWNGMIAAYAH--------------------------HGYGN-----EAINLFNKMQE 244
+ISWN +++ YA GY EA++ F +MQ
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 245 LGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLK 304
G + ++++ + +L +C+ G ++ G ++ + R + L+++ + G +
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVIS 293
Query: 305 EAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD--IGKLVAKKILKVEHENAGTYSLLSNM 362
+A + + K +S W +++G HGNA I + KV+ N T+ L +
Sbjct: 294 QAIQLFGQMEGKDVIS-WSTMISGYAYHGNAHGAIETFNEMQRAKVK-PNGITFLGLLSA 351
Query: 363 YASVGKWKE 371
+ VG W+E
Sbjct: 352 CSHVGMWQE 360
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 291 bits (745), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/441 (35%), Positives = 246/441 (55%), Gaps = 44/441 (9%)
Query: 35 IDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERD-------------- 80
++DAR + D MP +NVVSW AMI+ Y+Q EAL +F M D
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 81 ----------------MASWN---------AMLTGFFQNGELNRAEKLFAELPQKDVITW 115
+ WN ++L + + G++ A ++F LP++DV++
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
T+++ GYAQ GL EEAL+MF ++ + G + PN T+ ++L A SGLA L G+Q H +
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEG-MSPNYVTYASLLTALSGLALLDHGKQAHCHVL 281
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEA 235
+ + ++LI+MYSKCG L AR++FD+ + +R ISWN M+ Y+ HG G E
Sbjct: 282 RRELPFYAVLQNSLIDMYSKCGNLSYARRLFDN--MPERTAISWNAMLVGYSKHGLGREV 339
Query: 236 INLFNKMQ-ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNR-SIQVKEDHYACL 293
+ LF M+ E + + VT + +L+ CSH + D G+ FD ++ + +HY C+
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENA 353
VD+ GRAGR+ EAF I+ + K + V G LL C VH + DIG+ V ++++++E ENA
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENA 459
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSE 413
G Y +LSN+YAS G+W + NVR M K + K+PG SWI+ T+ F D++H + E
Sbjct: 460 GNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRRE 519
Query: 414 MLEYLLLGLHTKMKKFGDILD 434
+ + + KMK+ G + D
Sbjct: 520 EVLAKMKEISIKMKQAGYVPD 540
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F+ P V+ ++ +G +EAL + G + +L AC +
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFH----GYDALLNACLDKRA 67
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
L +GQ++H + KT + T + + L+ Y KC L ARK+ D+ + +++++SW MI
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE--MPEKNVVSWTAMI 125
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK---N 280
+ Y+ G+ +EA+ +F +M + N+ T+ +LT+C A + G Q ++K +
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185
Query: 281 RSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL 313
I V + L+D+ +AG++KEA I E L
Sbjct: 186 SHIFVG----SSLLDMYAKAGQIKEAREIFECL 214
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 291 bits (745), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 229/382 (59%), Gaps = 4/382 (1%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
NA++ YA +D A+ +F M RD+ SW +++ G+ + G L A F ++P +D I
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
+WT M+ GY + G E+L++F +MQ+ G+ P+ T V+VL AC+ L SL G+ I
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQS-AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTY 393
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
I K + + V +ALI+MY KCG A+K+F D + QRD +W M+ A++G G
Sbjct: 394 IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHD--MDQRDKFTWTAMVVGLANNGQGQ 451
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
EAI +F +MQ++ Q +D+TY+ +L+AC+H+G+VD+ ++F K+ + I+ HY C+
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENA 353
VD+ GRAG +KEA+ I+ + + + VWG LL +H + + +L AKKIL++E +N
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNG 571
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSE 413
Y+LL N+YA +WK+ VR K+ D +KK PG S IEV FV GDKSH QSE
Sbjct: 572 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 631
Query: 414 MLEYLLLGLHTKMKKFGDILDD 435
+ Y+ L + F L D
Sbjct: 632 EI-YMKLEELAQESTFAAYLPD 652
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 155/350 (44%), Gaps = 78/350 (22%)
Query: 33 GRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER----DMASWNAML 88
G + A LF ++P +VV WN MI G+++ E + L+ M + D ++ +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 89 TG---------------------------FFQN---------GELNRAEKLFAELPQKDV 112
G + QN G ++ A +F ++DV
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
+W M++GY + EE++++ +M+ N + P + T + VL ACS + +++H+
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNL-VSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ------------------- 213
+S+ + + R+ +AL+N Y+ CGE+ IA +IF R
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 214 ----------RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
RD ISW MI Y G NE++ +F +MQ G ++ T V +LTAC+H
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYA--CLVDL---CGRAGRLKEAFY 308
G ++ G + KN+ +K D L+D+ CG + + ++ F+
Sbjct: 381 LGSLEIGEWIKTYIDKNK---IKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 42/259 (16%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F M+ RDV SWT++V G + G + AR FD+MP+R+ +SW MI GY + +E+L
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESL 353
Query: 71 ELFERM------PER---------------------------------DMASWNAMLTGF 91
E+F M P+ D+ NA++ +
Sbjct: 354 EIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMY 413
Query: 92 FQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
F+ G +A+K+F ++ Q+D TWT+M+ G A +G +EA+K+F +MQ + ++P++ T+
Sbjct: 414 FKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQ-DMSIQPDDITY 472
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRV-VSALINMYSKCGELHIARKIFDDGL 210
+ VL AC+ + + ++ + E + V +++M + G + A +I
Sbjct: 473 LGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP 532
Query: 211 LRQRDLISWNGMIAAYAHH 229
+ ++ W ++ A H
Sbjct: 533 MNPNSIV-WGALLGASRLH 550
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 140/294 (47%), Gaps = 15/294 (5%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G ++ A KLF ++P+ DV+ W +M+ G+++ E ++++ M G + P++ TF +
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEG-VTPDSHTFPFL 140
Query: 155 L-GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ 213
L G +L G+++H + K G N V +AL+ MYS CG + +AR +FD +
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRC--K 198
Query: 214 RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA---GLVDEG 270
D+ SWN MI+ Y E+I L +M+ VT + +L+ACS L
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 271 IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCN 330
+Y + S++++ LV+ G + A I + + +S W ++ G
Sbjct: 259 HEYVSECKTEPSLRLEN----ALVNAYAACGEMDIAVRIFRSMKARDVIS-WTSIVKGYV 313
Query: 331 VHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
GN KL ++ + +++++ + Y G + E+ + +M+ G+
Sbjct: 314 ERGNL---KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 291 bits (745), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 256/473 (54%), Gaps = 52/473 (10%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP---------------------- 46
+ F+ M ERDV SW TMV G A+ G + +A +
Sbjct: 134 VVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSR 193
Query: 47 -----------------LRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLT 89
L NVV ++I YA+ +++ A F+ M +D+ W +++
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
G+ + G++ AEKLF E+P+K+ ++WT+++ GY + G AL +F KM A G +KP
Sbjct: 254 GYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG-VKPEQF 312
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF--- 206
TF + L A + +ASL G++IH + +T + N V+S+LI+MYSK G L + ++F
Sbjct: 313 TFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRIC 372
Query: 207 DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGL 266
DD + D + WN MI+A A HG G++A+ + + M + Q N T V +L ACSH+GL
Sbjct: 373 DD----KHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGL 428
Query: 267 VDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLL 326
V+EG+++F+ + I ++HYACL+DL GRAG KE IE + + +W +L
Sbjct: 429 VEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAIL 488
Query: 327 AGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
C +HGN ++GK A +++K++ E++ Y LLS++YA GKW+ +R MK + + K
Sbjct: 489 GVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNK 548
Query: 387 QPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLSR 439
+ SWIE+ V+ F V D SH+ + E + LH +++++ SR
Sbjct: 549 EKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFI-LHN----LAAVIEEEASR 596
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 151/314 (48%), Gaps = 31/314 (9%)
Query: 49 NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP 108
N + N +I Y + + +A ++F++M R++ SWN M++G+ ++G L RA +F +P
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 109 QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
++DV++W +M+ GYAQ G EAL F K G+K N +F +L AC L +
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEAL-WFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNR 199
Query: 169 QIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR---------------- 212
Q H + GF N + ++I+ Y+KCG++ A++ FD+ ++
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLG 259
Query: 213 -------------QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
+++ +SW +IA Y G GN A++LF KM LG + T+ L
Sbjct: 260 DMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSL 319
A + + G + +++ +++ + L+D+ ++G L+ + + K
Sbjct: 320 ASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC 378
Query: 320 SVWGPLLAGCNVHG 333
W +++ HG
Sbjct: 379 VFWNTMISALAQHG 392
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 136/324 (41%), Gaps = 66/324 (20%)
Query: 109 QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
++ + S ++ +A +A+ + G P + ++L C SL +G+
Sbjct: 8 KRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFD-LLASLLQQCGDTKSLKQGK 66
Query: 169 QIHQLISKTGFQE-NTRVVSALINMYSKCGELHIARKIFDDGLLR--------------- 212
IH+ + TGF+ NT + + LI MY KCG+ A K+FD LR
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKS 126
Query: 213 --------------QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL 258
+RD++SWN M+ YA G +EA+ + + + G + N+ ++ LL
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY--------------AC-LVDLCGRAGRL 303
TAC +K+R +Q+ + +C ++D + G++
Sbjct: 187 TAC----------------VKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 304 KEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMY 363
+ A + + VK + +W L++G G+ + + K ++ +N +++ L Y
Sbjct: 231 ESAKRCFDEMTVK-DIHIWTTLISGYAKLGDMEAAE---KLFCEMPEKNPVSWTALIAGY 286
Query: 364 ASVGKWKEAANVRMKMKDKGLKKQ 387
G A ++ KM G+K +
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPE 310
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 291 bits (744), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 270/466 (57%), Gaps = 46/466 (9%)
Query: 12 NQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITG-------- 59
NQ SWT+ ++ L ++GR+ +A F M L V +++ A+++G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 60 ------------------------------YAQNRRLDEALELFERMPERDMASWNAMLT 89
Y++ R +A +F+ M +++ +WN M+
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
G+ ++G+++ A K+F ++P++D+I+WT+M+ G+ + G EEAL F +MQ +G +KP+
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG-VKPDYV 207
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
+ L AC+ L +L+ G +H+ + F+ N RV ++LI++Y +CG + AR++F +
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN- 266
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
+ +R ++SWN +I +A +G +E++ F KMQE GF+ + VT+ LTACSH GLV+E
Sbjct: 267 -MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 270 GIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGC 329
G++YF + + I + +HY CLVDL RAGRL++A +++ + +K + V G LLA C
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC 385
Query: 330 NVHGNADI-GKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQP 388
+ HGN + + + K + + ++ Y +LSNMYA+ GKW+ A+ +R KMK GLKKQP
Sbjct: 386 SNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 445
Query: 389 GCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
G S IE+ + + VF+ GD +H ++ + +L + + ++ G +++
Sbjct: 446 GFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVE 491
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 142/275 (51%), Gaps = 48/275 (17%)
Query: 1 MWEDRG----CTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAM 56
M+ RG + F+ M++++ +W TM+DG +SG++D+A +FD+MP R+++SW AM
Sbjct: 118 MYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAM 177
Query: 57 ITGYAQNRRLDEALELFERM------PE--RDMASWNA----------------MLTGFF 92
I G+ + +EAL F M P+ +A+ NA +L+ F
Sbjct: 178 INGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDF 237
Query: 93 QN---------------GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTK 137
+N G + A ++F + ++ V++W S++ G+A +G + E+L F K
Sbjct: 238 KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRK 297
Query: 138 MQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV--VSALINMYSK 195
MQ G KP+ TF L ACS + + EG + Q++ K ++ + R+ L+++YS+
Sbjct: 298 MQEK-GFKPDAVTFTGALTACSHVGLVEEGLRYFQIM-KCDYRISPRIEHYGCLVDLYSR 355
Query: 196 CGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
G L A K+ ++ +++ ++AA ++HG
Sbjct: 356 AGRLEDALKLVQSMPMKPNEVV-IGSLLAACSNHG 389
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/464 (32%), Positives = 262/464 (56%), Gaps = 42/464 (9%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALF----------DRMPLRNVVS------- 52
F++M RDV +W TM++ + G +D+A LF D M L N+VS
Sbjct: 168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN 227
Query: 53 ----------------------WNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTG 90
A++T YA +D A E F +M R++ AM++G
Sbjct: 228 MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSG 287
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ + G L+ A+ +F + +KD++ WT+M++ Y + +EAL++F +M +G +KP+ +
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG-IKPDVVS 346
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
+V+ AC+ L L + + +H I G + + +ALINMY+KCG L R +F+
Sbjct: 347 MFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK-- 404
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
+ +R+++SW+ MI A + HG ++A++LF +M++ + N+VT+V +L CSH+GLV+EG
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 271 IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCN 330
+ F + +I K +HY C+VDL GRA L+EA +IE + V ++ +WG L++ C
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524
Query: 331 VHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 390
+HG ++GK AK+IL++E ++ G L+SN+YA +W++ N+R M++K + K+ G
Sbjct: 525 IHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGL 584
Query: 391 SWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
S I+ F++GDK H QS + L + +K+K G + D
Sbjct: 585 SRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPD 628
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 130/274 (47%), Gaps = 46/274 (16%)
Query: 1 MWEDRGCT-MA---FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAM 56
M+ GC MA F +M R++ T MV G +K GR+DDA+ +FD+ +++V W M
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 57 ITGYAQNRRLDEALELFERM------PE----------------RDMASW---------- 84
I+ Y ++ EAL +FE M P+ D A W
Sbjct: 316 ISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGL 375
Query: 85 -------NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTK 137
NA++ + + G L+ +F ++P+++V++W+SM+ + HG + +AL +F +
Sbjct: 376 ESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFAR 435
Query: 138 MQANGGLKPNNGTFVTVLGACSGLASLTEGQQIH-QLISKTGFQENTRVVSALINMYSKC 196
M+ ++PN TFV VL CS + EG++I + + +++++ +
Sbjct: 436 MKQE-NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 197 GELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
L A ++ + + +++ W +++A HG
Sbjct: 495 NLLREALEVI-ESMPVASNVVIWGSLMSACRIHG 527
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 138/287 (48%), Gaps = 9/287 (3%)
Query: 100 AEKLFAELPQK-DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
A +F+ +P + I + + ++ + + +++ GG + + +F+ +L A
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGG-RLDQFSFLPILKAV 121
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
S +++L EG ++H + K + V + ++MY+ CG ++ AR +FD+ + RD+++
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDE--MSHRDVVT 179
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
WN MI Y G +EA LF +M++ +++ +++AC G + ++ L+
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI 239
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
+N +++ LV + AG + A + V+ +L V +++G + G D
Sbjct: 240 EN-DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLDDA 297
Query: 339 KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
+++ + E ++ ++ + + Y +EA V +M G+K
Sbjct: 298 QVIFD---QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 288 bits (738), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 256/462 (55%), Gaps = 45/462 (9%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
+ +M++++ S +++G ++G + +AR +FD MP R + +WNAMI G Q +E
Sbjct: 16 VYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEG 75
Query: 70 LELFERM------P---------------------------------ERDMASWNAMLTG 90
L LF M P E D+ +++
Sbjct: 76 LSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHM 135
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ +NG+L E + +P ++++ W +++ G AQ+G E L ++ KM G +PN T
Sbjct: 136 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY-KMMKISGCRPNKIT 194
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
FVTVL +CS LA +GQQIH K G VVS+LI+MYSKCG L A K F +
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE-- 252
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE-LGFQANDVTYVELLTACSHAGLVDE 269
D + W+ MI+AY HG G+EAI LFN M E + N+V ++ LL ACSH+GL D+
Sbjct: 253 REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDK 312
Query: 270 GIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGC 329
G++ FD +++ + HY C+VDL GRAG L +A II + +K + +W LL+ C
Sbjct: 313 GLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSAC 372
Query: 330 NVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPG 389
N+H NA++ + V K+IL+++ ++ Y LL+N++AS +W++ + VR M+DK +KK+ G
Sbjct: 373 NIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAG 432
Query: 390 CSWIEVGNTVQVFVVGDKSHSQS-EMLEYLL-LGLHTKMKKF 429
SW E V F +GD+S S+S E+ YL L L K+K +
Sbjct: 433 ISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGY 474
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 117/220 (53%), Gaps = 3/220 (1%)
Query: 60 YAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
Y++ A+ ++ RM +++ S N ++ G+ + G+L A K+F E+P + + TW +M+
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
G Q +EE L +F +M G P+ T +V +GL S++ GQQIH K G
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGL-GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
+ + V S+L +MY + G+L + + R+L++WN +I A +G + L+
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRS--MPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
M+ G + N +T+V +L++CS + +G Q + +K
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK 220
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 1 MWEDRGC----TMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR-----NVV 51
M+ GC AF++ ++ D W++M+ G+ D+A LF+ M + N V
Sbjct: 236 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 295
Query: 52 SWNAMITGYAQNRRLDEALELFERMPER-----DMASWNAMLTGFFQNGELNRAEKLFAE 106
++ ++ + + D+ LELF+ M E+ + + ++ + G L++AE +
Sbjct: 296 AFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRS 355
Query: 107 LPQK-DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
+P K D++ W ++++ H +E A ++F ++ + PN+ +L
Sbjct: 356 MPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ---IDPNDSACYVLLA 403
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 253/465 (54%), Gaps = 55/465 (11%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM-------------PLRNVVS----- 52
F +M +R +W M+ G A G+++ +LF M L N S
Sbjct: 161 FVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSN 220
Query: 53 ---------------W-------NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTG 90
W N++++ Y + D+A+ E + SWN+++
Sbjct: 221 VVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDA 280
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ GE +A ++F P+K+++TWT+M+TGY ++G E+AL+ F +M +G + ++
Sbjct: 281 CMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSG-VDSDHFA 339
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
+ VL ACSGLA L G+ IH + GFQ V +AL+N+Y+KCG++ A + F D
Sbjct: 340 YGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGD-- 397
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
+ +DL+SWN M+ A+ HG ++A+ L++ M G + ++VT++ LLT CSH+GLV+EG
Sbjct: 398 IANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEG 457
Query: 271 IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSL--------SVW 322
F+ ++K+ I ++ DH C++D+ GR G L EA + L S S W
Sbjct: 458 CMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA----KDLATTYSSLVTDSSNNSSW 513
Query: 323 GPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
LL C+ H + ++G+ V+K + E ++ LLSN+Y S G+WKE +VR +M ++
Sbjct: 514 ETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVER 573
Query: 383 GLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMK 427
G+KK PGCSWIEVGN V FVVGD SH + E L L L +M+
Sbjct: 574 GMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 156/331 (47%), Gaps = 52/331 (15%)
Query: 93 QNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFV 152
++G + A ++F +P+ D + W +M+T Y++ GL +EA+ +FT+++ + KP++ +F
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA-KPDDYSFT 74
Query: 153 TVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR 212
+L C+ L ++ G++I L+ ++GF + V ++LI+MY KC + A K+F D
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 213 QRDLIS-------------------------------WNGMIAAYAHHGYGNEAINLFNK 241
R+ ++ WN MI+ +AH G ++LF +
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 242 MQELGFQANDVTYVELLTACS-HAGLVDEGIQYFDKLLKN---RSIQVKEDHYACLVDLC 297
M E F+ + T+ L+ ACS + V G +LKN +++ K + L
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLG 254
Query: 298 GRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH----ENA 353
R ++E +E + V +S W ++ C IG+ +K L+V H +N
Sbjct: 255 SRDDAMRE----LESIEVLTQVS-WNSIIDAC-----MKIGE--TEKALEVFHLAPEKNI 302
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
T++ + Y G ++A ++M G+
Sbjct: 303 VTWTTMITGYGRNGDGEQALRFFVEMMKSGV 333
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 171/422 (40%), Gaps = 117/422 (27%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM----PE 78
T+ + LAKSGRI AR +FD MP + V+WN M+T Y++ EA+ LF ++ +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 79 RDMASWNAML---------------------TGFFQNGELNR--------------AEKL 103
D S+ A+L +GF + +N A K+
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 104 FAEL--PQKDVITWTS-------------------------------MMTGYAQHGLSEE 130
F ++ ++ +TW S M++G+A G E
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 131 ALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS-LTEGQQIHQLISKTGFQENTRVVSAL 189
L +F +M KP+ TF +++ ACS +S + G+ +H ++ K G+ +++
Sbjct: 188 CLSLFKEM-LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 190 INMYSK----------------------------C---GELHIARKIFDDGLLRQRDLIS 218
++ Y+K C GE A ++F L ++++++
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFH--LAPEKNIVT 304
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
W MI Y +G G +A+ F +M + G ++ Y +L ACS L+ G K++
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-----KMI 359
Query: 279 KNRSIQVKEDHYA----CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
I YA LV+L + G +KEA + K L W +L VHG
Sbjct: 360 HGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFAFGVHGL 418
Query: 335 AD 336
AD
Sbjct: 419 AD 420
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 251/457 (54%), Gaps = 40/457 (8%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFE-------R 75
T + +K G+I ALF ++V++NAMI GY N + +L LF+ R
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 76 MPERDMASW-----------------------------NAMLTGFFQNGELNRAEKLFAE 106
+ + S A+ T + + E+ A KLF E
Sbjct: 320 LRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE 379
Query: 107 LPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTE 166
P+K + +W +M++GY Q+GL+E+A+ +F +MQ PN T +L AC+ L +L+
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ-KSEFSPNPVTITCILSACAQLGALSL 438
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAY 226
G+ +H L+ T F+ + V +ALI MY+KCG + AR++FD L+ +++ ++WN MI+ Y
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD--LMTKKNEVTWNTMISGY 496
Query: 227 AHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVK 286
HG G EA+N+F +M G VT++ +L ACSHAGLV EG + F+ ++ +
Sbjct: 497 GLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556
Query: 287 EDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKIL 346
HYAC+VD+ GRAG L+ A IE + ++ SVW LL C +H + ++ + V++K+
Sbjct: 557 VKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLF 616
Query: 347 KVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGD 406
+++ +N G + LLSN++++ + +AA VR K + L K PG + IE+G T VF GD
Sbjct: 617 ELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGD 676
Query: 407 KSHSQSEMLEYLLLGLHTKMKKFGDILDDDLS-RDVE 442
+SH Q + + L L KM++ G + +L+ DVE
Sbjct: 677 QSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVE 713
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 163/342 (47%), Gaps = 17/342 (4%)
Query: 1 MWEDRGCTMAFNQMQERDVSSWTTMVDGLAKS----GRIDDARALFDRMPLR-NVVSWNA 55
W F++M E+D W TM+ G K+ I R L + R + +
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 56 MITGYAQNRRLDEALELFERMPERDMASWNAMLTGFF----QNGELNRAEKLFAELPQKD 111
++ A+ + L +++ + S + +LTGF + G++ LF E + D
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 112 VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIH 171
++ + +M+ GY +G +E +L +F ++ +G + + T V+++ L + IH
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGA-RLRSSTLVSLVPVSGHLMLI---YAIH 342
Query: 172 QLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGY 231
K+ F + V +AL +YSK E+ ARK+FD+ ++ L SWN MI+ Y +G
Sbjct: 343 GYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDES--PEKSLPSWNAMISGYTQNGL 400
Query: 232 GNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA 291
+AI+LF +MQ+ F N VT +L+AC+ G + G ++ L+++ +
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVST 459
Query: 292 CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
L+ + + G + EA + + L K + W +++G +HG
Sbjct: 460 ALIGMYAKCGSIAEARRLFD-LMTKKNEVTWNTMISGYGLHG 500
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 46/299 (15%)
Query: 1 MWEDRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGY 60
++ G + N + VS+ T V +K I+ AR LFD P +++ SWNAMI+GY
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTV--YSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 61 AQNRRLDEALELFERMPERDMAS----------------------W-------------- 84
QN ++A+ LF M + + + W
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 85 ---NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
A++ + + G + A +LF + +K+ +TW +M++GY HG +EAL +F +M N
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM-LN 514
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQI-HQLISKTGFQENTRVVSALINMYSKCGELH 200
G+ P TF+ VL ACS + EG +I + +I + GF+ + + + ++++ + G L
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 201 IARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
A + F + + + W ++ A H N A + K+ EL ++V Y LL+
Sbjct: 575 RALQ-FIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL--DPDNVGYHVLLS 630
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 133/290 (45%), Gaps = 42/290 (14%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
D+S T + L+ G I AR +F + +V +N ++ G++ N +L +F +
Sbjct: 51 DISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLR 110
Query: 77 ------PERDMASW-------------------NAMLTG--------------FFQNGEL 97
P ++ A++ G +F+ +
Sbjct: 111 KSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRV 170
Query: 98 NRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGA 157
A K+F +P+KD I W +M++GY ++ + E++++F + + + T + +L A
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 158 CSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI 217
+ L L G QIH L +KTG + V++ I++YSKCG++ + +F + R+ D++
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFRE--FRKPDIV 288
Query: 218 SWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
++N MI Y +G +++LF ++ G + T V L+ H L+
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 3/179 (1%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G + A +F + + DV + +M G++ + +L +F ++ + LKPN+ T+
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
+ A SG G+ IH G + S ++ MY K + ARK+FD + ++
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDR--MPEK 183
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGIQ 272
D I WN MI+ Y + E+I +F + E + + T +++L A + + G+Q
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ 242
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 238/424 (56%), Gaps = 41/424 (9%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------P 77
+++ K ++DA LFD+MP RNV+SW MI+ Y++ + +ALEL M P
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 78 ------------------------------ERDMASWNAMLTGFFQNGELNRAEKLFAEL 107
E D+ +A++ F + GE A +F E+
Sbjct: 161 NVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 108 PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEG 167
D I W S++ G+AQ+ S+ AL++F +M+ G T +VL AC+GLA L G
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMK-RAGFIAEQATLTSVLRACTGLALLELG 279
Query: 168 QQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
Q H I K + ++ + +AL++MY KCG L A ++F+ +++RD+I+W+ MI+ A
Sbjct: 280 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQ--MKERDVITWSTMISGLA 335
Query: 228 HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKE 287
+GY EA+ LF +M+ G + N +T V +L ACSHAGL+++G YF + K I
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 288 DHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILK 347
+HY C++DL G+AG+L +A ++ + + W LL C V N + + AKK++
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 348 VEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDK 407
++ E+AGTY+LLSN+YA+ KW +R +M+D+G+KK+PGCSWIEV + F++GD
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDN 515
Query: 408 SHSQ 411
SH Q
Sbjct: 516 SHPQ 519
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 136/244 (55%), Gaps = 10/244 (4%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N ++ + + LN A +LF ++PQ++VI+WT+M++ Y++ + ++AL++ M + +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD-NV 158
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
+PN T+ +VL +C+G++ + + +H I K G + + V SALI++++K GE A
Sbjct: 159 RPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+FD+ + D I WN +I +A + + A+ LF +M+ GF A T +L AC+
Sbjct: 216 VFDE--MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
L++ G+Q ++K + + LVD+ + G L++A + + + + W
Sbjct: 274 ALLELGMQAHVHIVKYDQDLILNN---ALVDMYCKCGSLEDALRVFNQMKER-DVITWST 329
Query: 325 LLAG 328
+++G
Sbjct: 330 MISG 333
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 107/223 (47%), Gaps = 24/223 (10%)
Query: 131 ALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALI 190
A+K +Q++G L ++ T+ ++ C ++ EG I + + G + +V+ LI
Sbjct: 45 AMKAMDSLQSHG-LWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 191 NMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAN 250
NMY K L+ A ++FD + QR++ISW MI+AY+ +A+ L M + N
Sbjct: 104 NMYVKFNLLNDAHQLFDQ--MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 251 DVTYVELLTACS--------HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
TY +L +C+ H G++ EG++ D ++ + L+D+ + G
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCGIIKEGLES-DVFVR-----------SALIDVFAKLGE 209
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
++A + + + V VW ++ G + +D+ + K++
Sbjct: 210 PEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 233/375 (62%), Gaps = 2/375 (0%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
+IT YA+ L A +F+ M +RD+ WNAM+TG+ + G++ A +LF +P+K+V
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
+WT++++G++Q+G EALKMF M+ + +KPN+ T V+VL AC+ L L G+++
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
+ GF +N V +A I MYSKCG + +A+++F++ L QR+L SWN MI + A HG +
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEE-LGNQRNLCSWNSMIGSLATHGKHD 299
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
EA+ LF +M G + + VT+V LL AC H G+V +G + F + + I K +HY C+
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENA 353
+DL GR G+L+EA+ +I+ + +K VWG LL C+ HGN +I ++ ++ + K+E N
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNP 419
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSW-IEVGNTVQVFVVGDKSHSQS 412
G ++SN+YA+ KW +R MK + + K G S+ +EVG V F V DKSH +S
Sbjct: 420 GNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRS 479
Query: 413 EMLEYLLLGLHTKMK 427
+ +L + +MK
Sbjct: 480 YEIYQVLEEIFRRMK 494
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 46/264 (17%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F++M +RDV W M+ G + G + A LFD MP +NV SW +I+G++QN EA
Sbjct: 139 VFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEA 198
Query: 70 LELFERMPERDMASWNAMLT---------------------------GFFQN-------- 94
L++F M E+D + +T GFF N
Sbjct: 199 LKMFLCM-EKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATI 257
Query: 95 ------GELNRAEKLFAEL-PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPN 147
G ++ A++LF EL Q+++ +W SM+ A HG +EAL +F +M G KP+
Sbjct: 258 EMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGE-KPD 316
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGELHIARKIF 206
TFV +L AC + +GQ++ + + + +I++ + G+L A +
Sbjct: 317 AVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLI 376
Query: 207 DDGLLRQRDLISWNGMIAAYAHHG 230
++ D + W ++ A + HG
Sbjct: 377 KTMPMKP-DAVVWGTLLGACSFHG 399
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 7/205 (3%)
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS 159
A KLF + ++ Y H E++ ++ + +G L+P++ TF + A +
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDG-LRPSHHTFNFIFAASA 93
Query: 160 GLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISW 219
+S + +H ++GF+ ++ + LI Y+K G L AR++FD+ + +RD+ W
Sbjct: 94 SFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDE--MSKRDVPVW 151
Query: 220 NGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
N MI Y G A+ LF+ M + N ++ +++ S G E ++ F + K
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMP----RKNVTSWTTVISGFSQNGNYSEALKMFLCMEK 207
Query: 280 NRSIQVKEDHYACLVDLCGRAGRLK 304
++S++ ++ C G L+
Sbjct: 208 DKSVKPNHITVVSVLPACANLGELE 232
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 285 bits (728), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 251/451 (55%), Gaps = 43/451 (9%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------- 76
+V K G + ++R + +MP R+VV+WNA+I GYA++ D+AL F+ M
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 444
Query: 77 -----------------------P----------ERDMASWNAMLTGFFQNGELNRAEKL 103
P E D N+++T + + G+L+ ++ L
Sbjct: 445 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 504
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F L +++ITW +M+ A HG EE LK+ +KM++ G + + +F L A + LA
Sbjct: 505 FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG-VSLDQFSFSEGLSAAAKLAV 563
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
L EGQQ+H L K GF+ ++ + +A +MYSKCGE+ K+ + R L SWN +I
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV--NRSLPSWNILI 621
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
+A HGY E F++M E+G + VT+V LLTACSH GLVD+G+ Y+D + ++ +
Sbjct: 622 SALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGL 681
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
+ +H C++DL GR+GRL EA I + +K + VW LLA C +HGN D G+ A+
Sbjct: 682 EPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAE 741
Query: 344 KILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFV 403
+ K+E E+ Y L SNM+A+ G+W++ NVR +M K +KK+ CSW+++ + V F
Sbjct: 742 NLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFG 801
Query: 404 VGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
+GD++H Q+ + L + +K+ G + D
Sbjct: 802 IGDRTHPQTMEIYAKLEDIKKLIKESGYVAD 832
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 173/339 (51%), Gaps = 24/339 (7%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITG----- 59
+ F QM +D+ SW +++ GR DA L M N V++ + +
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 60 YAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
+ + R+ L + + + NA+++ + + GE++ + ++ ++P++DV+ W +++
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 418
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTE-GQQIHQLISKTG 178
GYA+ ++AL F M+ G+ N T V+VL AC L E G+ +H I G
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 477
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
F+ + V ++LI MY+KCG+L ++ +F+ L R++I+WN M+AA AHHG+G E + L
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLFNG--LDNRNIITWNAMLAANAHHGHGEEVLKL 535
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH----YACLV 294
+KM+ G + ++ E L+A + +++EG Q L ++++ +H +
Sbjct: 536 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-----LHGLAVKLGFEHDSFIFNAAA 590
Query: 295 DLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
D+ + G + E ++ V SL W L++ HG
Sbjct: 591 DMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHG 628
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 166/342 (48%), Gaps = 13/342 (3%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL------RNVVSWNAMITGYAQNR 64
F+QM ERD SW ++ A++G I+++ +F M VS + G+ ++
Sbjct: 201 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 260
Query: 65 RLDEALE-LFERMP-ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
+ + L +M + + N +L + G A +F ++P KD+I+W S+M +
Sbjct: 261 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 320
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
G S +AL + M ++G N TF + L AC +G+ +H L+ +G N
Sbjct: 321 VNDGRSLDALGLLCSMISSGK-SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYN 379
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
+ +AL++MY K GE+ +R++ + +RD+++WN +I YA ++A+ F M
Sbjct: 380 QIIGNALVSMYGKIGEMSESRRVLLQ--MPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 437
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
+ G +N +T V +L+AC G + E + + + + E L+ + + G
Sbjct: 438 RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 497
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA-DIGKLVAK 343
L + + GL + ++ W +LA HG+ ++ KLV+K
Sbjct: 498 LSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGEEVLKLVSK 538
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 148/327 (45%), Gaps = 53/327 (16%)
Query: 45 MPLRNVVSWNAMITGYAQNRRLDEALELFERMPE-------------------------- 78
MP+RN VSWN M++G + E +E F +M +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 79 --------------RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQ 124
D+ A+L + G ++ + K+F E+P ++V++WTS+M GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 125 HGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTR 184
G EE + ++ M+ G+ N + V+ +C L + G+QI + K+G +
Sbjct: 121 KGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 185 VVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE 244
V ++LI+M G + A IFD + +RD ISWN + AAYA +G+ E+ +F+ M+
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQ--MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 245 LGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGR----A 300
+ N T LL+ H VD Q + + + +++ D C+ + R A
Sbjct: 238 FHDEVNSTTVSTLLSVLGH---VDH--QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 301 GRLKEAFYIIEGLGVKLSLSVWGPLLA 327
GR EA + + + K L W L+A
Sbjct: 293 GRSVEANLVFKQMPTK-DLISWNSLMA 318
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 251/451 (55%), Gaps = 43/451 (9%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------- 76
+V K G + ++R + +MP R+VV+WNA+I GYA++ D+AL F+ M
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 461
Query: 77 -----------------------P----------ERDMASWNAMLTGFFQNGELNRAEKL 103
P E D N+++T + + G+L+ ++ L
Sbjct: 462 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 521
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F L +++ITW +M+ A HG EE LK+ +KM++ G + + +F L A + LA
Sbjct: 522 FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG-VSLDQFSFSEGLSAAAKLAV 580
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
L EGQQ+H L K GF+ ++ + +A +MYSKCGE+ K+ + R L SWN +I
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV--NRSLPSWNILI 638
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
+A HGY E F++M E+G + VT+V LLTACSH GLVD+G+ Y+D + ++ +
Sbjct: 639 SALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGL 698
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
+ +H C++DL GR+GRL EA I + +K + VW LLA C +HGN D G+ A+
Sbjct: 699 EPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAE 758
Query: 344 KILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFV 403
+ K+E E+ Y L SNM+A+ G+W++ NVR +M K +KK+ CSW+++ + V F
Sbjct: 759 NLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFG 818
Query: 404 VGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
+GD++H Q+ + L + +K+ G + D
Sbjct: 819 IGDRTHPQTMEIYAKLEDIKKLIKESGYVAD 849
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 173/339 (51%), Gaps = 24/339 (7%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITG----- 59
+ F QM +D+ SW +++ GR DA L M N V++ + +
Sbjct: 317 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 376
Query: 60 YAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
+ + R+ L + + + NA+++ + + GE++ + ++ ++P++DV+ W +++
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 435
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTE-GQQIHQLISKTG 178
GYA+ ++AL F M+ G+ N T V+VL AC L E G+ +H I G
Sbjct: 436 GGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
F+ + V ++LI MY+KCG+L ++ +F+ L R++I+WN M+AA AHHG+G E + L
Sbjct: 495 FESDEHVKNSLITMYAKCGDLSSSQDLFNG--LDNRNIITWNAMLAANAHHGHGEEVLKL 552
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH----YACLV 294
+KM+ G + ++ E L+A + +++EG Q L ++++ +H +
Sbjct: 553 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-----LHGLAVKLGFEHDSFIFNAAA 607
Query: 295 DLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
D+ + G + E ++ V SL W L++ HG
Sbjct: 608 DMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHG 645
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 157/342 (45%), Gaps = 53/342 (15%)
Query: 30 AKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPE----------- 78
K GR+ AR LFD MP+RN VSWN M++G + E +E F +M +
Sbjct: 3 TKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIA 62
Query: 79 -----------------------------RDMASWNAMLTGFFQNGELNRAEKLFAELPQ 109
D+ A+L + G ++ + K+F E+P
Sbjct: 63 SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD 122
Query: 110 KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
++V++WTS+M GY+ G EE + ++ M+ G+ N + V+ +C L + G+Q
Sbjct: 123 RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
I + K+G + V ++LI+M G + A IFD + +RD ISWN + AAYA +
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQ--MSERDTISWNSIAAAYAQN 239
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH 289
G+ E+ +F+ M+ + N T LL+ H VD Q + + + +++ D
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH---VDH--QKWGRGIHGLVVKMGFDS 294
Query: 290 YACLVDLCGR----AGRLKEAFYIIEGLGVKLSLSVWGPLLA 327
C+ + R AGR EA + + + K L W L+A
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMA 335
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 166/342 (48%), Gaps = 13/342 (3%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL------RNVVSWNAMITGYAQNR 64
F+QM ERD SW ++ A++G I+++ +F M VS + G+ ++
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 277
Query: 65 RLDEALE-LFERMP-ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
+ + L +M + + N +L + G A +F ++P KD+I+W S+M +
Sbjct: 278 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 337
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
G S +AL + M ++G N TF + L AC +G+ +H L+ +G N
Sbjct: 338 VNDGRSLDALGLLCSMISSGK-SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYN 396
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
+ +AL++MY K GE+ +R++ + +RD+++WN +I YA ++A+ F M
Sbjct: 397 QIIGNALVSMYGKIGEMSESRRVLLQ--MPRRDVVAWNALIGGYAEDEDPDKALAAFQTM 454
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
+ G +N +T V +L+AC G + E + + + + E L+ + + G
Sbjct: 455 RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 514
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA-DIGKLVAK 343
L + + GL + ++ W +LA HG+ ++ KLV+K
Sbjct: 515 LSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGEEVLKLVSK 555
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 192 MYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAND 251
MY+K G + AR +FD ++ R+ +SWN M++ G E + F KM +LG + +
Sbjct: 1 MYTKFGRVKPARHLFD--IMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58
Query: 252 VTYVELLTACSHAG-LVDEGIQ 272
L+TAC +G + EG+Q
Sbjct: 59 FVIASLVTACGRSGSMFREGVQ 80
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 284 bits (727), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 146/460 (31%), Positives = 253/460 (55%), Gaps = 44/460 (9%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRN--VVSWNAMITGYAQNRRLDEALELFERMPE-- 78
T ++ K G + DAR +F+ P + V +NA+I+GY N ++ +A +F RM E
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 79 -------------------------------------RDMASWNAMLTGFFQNGELNRAE 101
++A N+ +T + + G +
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211
Query: 102 KLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGL 161
+LF E+P K +ITW ++++GY+Q+GL+ + L+++ +M+++G + P+ T V+VL +C+ L
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-VCPDPFTLVSVLSSCAHL 270
Query: 162 ASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
+ G ++ +L+ GF N V +A I+MY++CG L AR +FD ++ + L+SW
Sbjct: 271 GAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD--IMPVKSLVSWTA 328
Query: 222 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNR 281
MI Y HG G + LF+ M + G + + +V +L+ACSH+GL D+G++ F + +
Sbjct: 329 MIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREY 388
Query: 282 SIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLV 341
++ +HY+CLVDL GRAGRL EA IE + V+ +VWG LL C +H N D+ +L
Sbjct: 389 KLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELA 448
Query: 342 AKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQV 401
K+++ E N G Y L+SN+Y+ + +R+ M+++ +K+PG S++E V +
Sbjct: 449 FAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHL 508
Query: 402 FVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLSRDV 441
F+ GD+SH Q+E + +L L T + + +D D +V
Sbjct: 509 FLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEV 548
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 139/314 (44%), Gaps = 44/314 (14%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
+ +V+ + + K G ++ R LFD MP++ +++WNA+I+GY+QN + LEL+E+
Sbjct: 188 DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQ 247
Query: 76 MPERDMAS---------------------------------------WNAMLTGFFQNGE 96
M + NA ++ + + G
Sbjct: 248 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGN 307
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
L +A +F +P K +++WT+M+ Y HG+ E L +F M G++P+ FV VL
Sbjct: 308 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM-IKRGIRPDGAVFVMVLS 366
Query: 157 ACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
ACS +G ++ + + + + S L+++ + G L A + F + + + D
Sbjct: 367 ACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAME-FIESMPVEPD 425
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFD 275
W ++ A H + A F K+ E F+ N++ Y L++ EGI
Sbjct: 426 GAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIR 483
Query: 276 KLLKNRSIQVKEDH 289
+++ R+ + K +
Sbjct: 484 VMMRERAFRKKPGY 497
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
W + A L E++ ++ M +G P+ +F +L +C+ L+ GQQ+H
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGS-SPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
++K G + V++ALI+MY KCG + ARK+F++ + + +N +I+ Y +
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACS 262
+A +F +M+E G + VT + L+ C+
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCT 167
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 249/398 (62%), Gaps = 13/398 (3%)
Query: 49 NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP 108
+V + N++I YA A LF+R+PE D SWN+++ G+ + G+++ A LF ++
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 109 QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
+K+ I+WT+M++GY Q +++EAL++F +MQ N ++P+N + L AC+ L +L +G+
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQ-NSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 169 QIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAH 228
IH ++KT + ++ + LI+MY+KCGE+ A ++F + ++++ + +W +I+ YA+
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN--IKKKSVQAWTALISGYAY 325
Query: 229 HGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED 288
HG+G EAI+ F +MQ++G + N +T+ +LTACS+ GLV+EG F + ++ +++ +
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 289 HYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKV 348
HY C+VDL GRAG L EA I+ + +K + +WG LL C +H N ++G+ + + ++ +
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
Query: 349 EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKS 408
+ + G Y +N++A KW +AA R MK++G+ K PGCS I + T F+ GD+S
Sbjct: 446 DPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRS 505
Query: 409 HSQSEMLEYLLLGLHTKMKKFG----------DILDDD 436
H + E ++ + K+++ G D++DDD
Sbjct: 506 HPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 543
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 42/261 (16%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDE 68
+ F+++ E D SW +++ G K+G++D A LF +M +N +SW MI+GY Q E
Sbjct: 171 LLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKE 230
Query: 69 ALELFERMPERDMASWNAMLTG-------------------------------------- 90
AL+LF M D+ N L
Sbjct: 231 ALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLID 290
Query: 91 -FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
+ + GE+ A ++F + +K V WT++++GYA HG EA+ F +MQ G+KPN
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQ-KMGIKPNVI 349
Query: 150 TFVTVLGACSGLASLTEGQQI-HQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD 208
TF VL ACS + EG+ I + + + ++++ + G L A++ +
Sbjct: 350 TFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQE 409
Query: 209 GLLRQRDLISWNGMIAAYAHH 229
L+ +I W ++ A H
Sbjct: 410 MPLKPNAVI-WGALLKACRIH 429
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 34/268 (12%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG-TFVTVL 155
L A+ +F + D W M+ G++ E +L ++ +M + P+N TF ++L
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSA--PHNAYTFPSLL 122
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD------- 208
ACS L++ E QIH I+K G++ + V++LIN Y+ G +A +FD
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 209 -------------------GLLR---QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG 246
L R +++ ISW MI+ Y EA+ LF++MQ
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 247 FQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEA 306
+ ++V+ L+AC+ G +++G ++ L I++ L+D+ + G ++EA
Sbjct: 243 VEPDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 307 FYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
+ + + K S+ W L++G HG+
Sbjct: 302 LEVFKNIKKK-SVQAWTALISGYAYHGH 328
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/427 (34%), Positives = 246/427 (57%), Gaps = 31/427 (7%)
Query: 17 RDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM 76
+D + M+D KSG + +LF++ + NA ITG ++N +D+ALE+FE
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELF 344
Query: 77 PERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFT 136
E+ M ELN V++WTS++ G AQ+G EAL++F
Sbjct: 345 KEQTM--------------ELN-------------VVSWTSIIAGCAQNGKDIEALELFR 377
Query: 137 KMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKC 196
+MQ G+KPN+ T ++L AC +A+L G+ H + +N V SALI+MY+KC
Sbjct: 378 EMQV-AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC 436
Query: 197 GELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVE 256
G +++++ +F+ ++ ++L+ WN ++ ++ HG E +++F + + + +++
Sbjct: 437 GRINLSQIVFN--MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTS 494
Query: 257 LLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVK 316
LL+AC GL DEG +YF + + I+ + +HY+C+V+L GRAG+L+EA+ +I+ + +
Sbjct: 495 LLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE 554
Query: 317 LSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVR 376
VWG LL C + N D+ ++ A+K+ +E EN GTY LLSN+YA+ G W E ++R
Sbjct: 555 PDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIR 614
Query: 377 MKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDD 436
KM+ GLKK PGCSWI+V N V + GDKSH Q + + + + +M+K G + D
Sbjct: 615 NKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLD 674
Query: 437 LS-RDVE 442
+ DVE
Sbjct: 675 FALHDVE 681
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 165/407 (40%), Gaps = 87/407 (21%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQ 62
+ + + + S+++++ L K+ + +F RM P +V+ +
Sbjct: 71 LVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELS 130
Query: 63 NRRLDEALELFERMPERDMASW--NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMT 120
++ + + + DM ++ +M + + G + A K+F + KDV+T ++++
Sbjct: 131 AFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLC 190
Query: 121 GYAQHGLSEEALKMFTKMQANG----------------------------------GLKP 146
YA+ G EE +++ ++M+++G G P
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
+ T +VL + L G+ IH + K G ++ V+SA+I+MY K G ++ +F
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 207 DD--------------GLLR-------------------QRDLISWNGMIAAYAHHGYGN 233
+ GL R + +++SW +IA A +G
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHA-----GLVDEGIQYFDKLLKNRSIQVKED 288
EA+ LF +MQ G + N VT +L AC + G G LL N +
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG---- 426
Query: 289 HYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
+ L+D+ + GR+ + + + K +L W L+ G ++HG A
Sbjct: 427 --SALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKA 470
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 99/181 (54%), Gaps = 3/181 (1%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
N A+ + +P + +++S++ + L +++ +F++M ++G L P++ +
Sbjct: 66 FNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHG-LIPDSHVLPNLFK 124
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
C+ L++ G+QIH + +G + V ++ +MY +CG + ARK+FD + +D+
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDR--MSDKDV 182
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
++ + ++ AYA G E + + ++M+ G +AN V++ +L+ + +G E + F K
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 277 L 277
+
Sbjct: 243 I 243
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 46/262 (17%)
Query: 6 GCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYA 61
G FNQ + + + GL+++G +D A +F+ + NVVSW ++I G A
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 62 QNRRLDEALELFERM------------PERDMASWN------------------------ 85
QN + EALELF M P A N
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 86 ---AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
A++ + + G +N ++ +F +P K+++ W S+M G++ HG ++E + +F +
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT- 483
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGELHI 201
LKP+ +F ++L AC + EG + +++S+ G + S ++N+ + G+L
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 202 ARKIFDDGLLRQRDLISWNGMI 223
A + + + + D W ++
Sbjct: 544 AYDLIKE-MPFEPDSCVWGALL 564
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 254/428 (59%), Gaps = 8/428 (1%)
Query: 6 GCTM-AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP-LRNVVSWNAMITGYAQN 63
GC AF++M R SWT ++ G + G +D A LFD+MP +++VV +NAM+ G+ ++
Sbjct: 130 GCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKS 189
Query: 64 RRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYA 123
+ A LF+ M + + +W M+ G+ +++ A KLF +P++++++W +M+ GY
Sbjct: 190 GDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYC 249
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
Q+ +E +++F +MQA L P++ T ++VL A S +L+ G+ H + + +
Sbjct: 250 QNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKV 309
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
+V +A+++MYSKCGE+ A++IFD+ + ++ + SWN MI YA +G A++LF M
Sbjct: 310 KVCTAILDMYSKCGEIEKAKRIFDE--MPEKQVASWNAMIHGYALNGNARAALDLFVTMM 367
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRL 303
+ + +++T + ++TAC+H GLV+EG ++F +++ + K +HY C+VDL GRAG L
Sbjct: 368 -IEEKPDEITMLAVITACNHGGLVEEGRKWF-HVMREMGLNAKIEHYGCMVDLLGRAGSL 425
Query: 304 KEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMY 363
KEA +I + + + + L+ C + + + + + KK +++E +N G Y LL N+Y
Sbjct: 426 KEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLY 485
Query: 364 ASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLL--LG 421
A+ +W + V+ M+ KK+ GCS IE+ V F+ GD +H + +L L
Sbjct: 486 AADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLL 545
Query: 422 LHTKMKKF 429
+H +K+
Sbjct: 546 MHMNEEKY 553
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 153/362 (42%), Gaps = 54/362 (14%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRN-VVSWNAMITGYAQNRRLDEALELFE 74
E +V +T + A + I AR LFD+ P R+ N+MI Y + R+ ++ L+
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYR 66
Query: 75 RM-------PER---------------------------------DMASWNAMLTGFFQN 94
+ P+ DM ++ + +
Sbjct: 67 DLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKF 126
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G++ A F E+P + ++WT++++GY + G + A K+F +M P+ V
Sbjct: 127 GKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM-------PHVKDVVIY 179
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
G + +L + + + +I+ Y ++ ARK+FD + +R
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMT-HKTVITWTTMIHGYCNIKDIDAARKLFD--AMPER 236
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQ-ELGFQANDVTYVELLTACSHAGLVDEGIQY 273
+L+SWN MI Y + E I LF +MQ +DVT + +L A S G + G ++
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG-EW 295
Query: 274 FDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
++ + + K ++D+ + G +++A I + + K ++ W ++ G ++G
Sbjct: 296 CHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK-QVASWNAMIHGYALNG 354
Query: 334 NA 335
NA
Sbjct: 355 NA 356
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 281 bits (718), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 249/454 (54%), Gaps = 42/454 (9%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
E DV+ +++ +K G ++ AR +FD M R++VSWN MI Y +NR EAL++F
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 76 MPER---------------------------------------DMASWNAMLTGFFQNGE 96
M ++ A+L + + G
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
+ A ++F + K +TW+SM+ GY Q+ EEAL ++ + Q L+ N T +V+
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ-RMSLEQNQFTLSSVIC 271
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
ACS LA+L EG+Q+H +I K+GF N V S+ ++MY+KCG L + IF + +++++L
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE--VQEKNL 329
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
WN +I+ +A H E + LF KMQ+ G N+VT+ LL+ C H GLV+EG ++F
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ + HY+C+VD+ GRAG L EA+ +I+ + + S+WG LLA C V+ N +
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLE 449
Query: 337 IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVG 396
+ ++ A+K+ ++E ENAG + LLSN+YA+ +W+E A R ++D +KK G SWI++
Sbjct: 450 LAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIK 509
Query: 397 NTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFG 430
+ V F VG+ H + + L L K +KFG
Sbjct: 510 DKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 543
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 100/179 (55%), Gaps = 12/179 (6%)
Query: 154 VLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ 213
+L C+ ++ E + H I + + + +++ LIN YSKCG + +AR++F DG+L +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF-DGML-E 124
Query: 214 RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQY 273
R L+SWN MI Y + +EA+++F +M+ GF+ ++ T +L+AC G+ + ++
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALEC 181
Query: 274 FDKLLKNRSIQVKEDHY----ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
K L S++ D L+DL + G +K+A + E + K S++ W ++AG
Sbjct: 182 --KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMVAG 237
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALF---DRMPL-RNVVSWNAMITGYAQNRR 65
F MQ++ +W++MV G ++ ++A L+ RM L +N + +++I +
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278
Query: 66 LDEALELFERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
L E ++ + + S ++ + + + G L + +F+E+ +K++ W ++++G
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT-GFQ 180
+A+H +E + +F KMQ + G+ PN TF ++L C + EG++ +L+ T G
Sbjct: 339 FAKHARPKEVMILFEKMQQD-GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLS 397
Query: 181 ENTRVVSALINMYSKCGEL 199
N S ++++ + G L
Sbjct: 398 PNVVHYSCMVDILGRAGLL 416
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 257/468 (54%), Gaps = 49/468 (10%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
AF + D+ + ++ + G+++DAR +FD +P RN+VSW +MI GY N +A
Sbjct: 102 AFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDA 161
Query: 70 LELFE----------------------------RMP-----------------ERDMASW 84
+ LF+ R+P +R ++
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221
Query: 85 NAMLTGFFQNGE--LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
N +L + + GE + A K+F ++ KD +++ S+M+ YAQ G+S EA ++F ++ N
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA 202
+ N T TVL A S +L G+ IH + + G +++ V +++I+MY KCG + A
Sbjct: 282 VVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
Query: 203 RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
RK FD ++ +++ SW MIA Y HG+ +A+ LF M + G + N +T+V +L ACS
Sbjct: 342 RKAFDR--MKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 263 HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
HAGL EG ++F+ + ++ +HY C+VDL GRAG L++A+ +I+ + +K +W
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 323 GPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
LLA C +H N ++ ++ ++ +++ N G Y LLS++YA G+WK+ VRM MK++
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 383 GLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFG 430
GL K PG S +E+ V VF++GD+ H Q E + L L+ K+ + G
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 179/357 (50%), Gaps = 35/357 (9%)
Query: 3 EDRGCTMAFNQMQER-DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYA 61
E + T FN+ ++ DV SW +++ LA+SG D A AL +R + + +
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSG--DSAEALLAFSSMRKLSLYPTRSSFPC 81
Query: 62 QNRRLDEALELFERMP----------ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKD 111
+ ++F + D+ +A++ + G+L A K+F E+P+++
Sbjct: 82 AIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRN 141
Query: 112 VITWTSMMTGYAQHGLSEEALKMFTKMQA-----NGGLKPNNGTFVTVLGACSGLASLTE 166
+++WTSM+ GY +G + +A+ +F + + + ++ V+V+ ACS + +
Sbjct: 142 IVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGL 201
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGE--LHIARKIFDDGLLRQRDLISWNGMIA 224
+ IH + K GF V + L++ Y+K GE + +ARKIFD + +D +S+N +++
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQ--IVDKDRVSYNSIMS 259
Query: 225 AYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
YA G NEA +F ++ + N +T +L A SH+G + G D++++ +
Sbjct: 260 VYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR---M 316
Query: 284 QVKEDHYA--CLVDL---CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
+++D ++D+ CGR ++AF ++ V+ W ++AG +HG+A
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR----SWTAMIAGYGMHGHA 369
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 241/429 (56%), Gaps = 21/429 (4%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVV---------------SW----NAMITGYAQNRR 65
M+D + RI A+ LRN++ SW NA+I Y + R
Sbjct: 328 MMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 66 LDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQH 125
D A +F+RM + + +WN+++ G+ +NGE++ A + F +P+K++++W ++++G Q
Sbjct: 388 QDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQG 447
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
L EEA+++F MQ+ G+ + T +++ AC L +L + I+ I K G Q + R+
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 186 VSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
+ L++M+S+CG+ A IF+ L RD+ +W I A A G AI LF+ M E
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ 565
Query: 246 GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKE 305
G + + V +V LTACSH GLV +G + F +LK + ++ HY C+VDL GRAG L+E
Sbjct: 566 GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEE 625
Query: 306 AFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYAS 365
A +IE + ++ + +W LLA C V GN ++ A+KI + E G+Y LLSN+YAS
Sbjct: 626 AVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYAS 685
Query: 366 VGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTK 425
G+W + A VR+ MK+KGL+K PG S I++ F GD+SH + +E +L + +
Sbjct: 686 AGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745
Query: 426 MKKFGDILD 434
G + D
Sbjct: 746 ASHLGHVPD 754
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 173/325 (53%), Gaps = 16/325 (4%)
Query: 22 WTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEALELFER 75
+ +++ G A SG ++A LF RM P + + ++ A++R +++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFG--LSACAKSRAKGNGIQIHGL 159
Query: 76 MPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEA 131
+ + +D+ N+++ + + GEL+ A K+F E+ +++V++WTSM+ GYA+ +++A
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 132 LKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALIN 191
+ +F +M + + PN+ T V V+ AC+ L L G++++ I +G + N +VSAL++
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 192 MYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAND 251
MY KC + +A+++FD+ DL N M + Y G EA+ +FN M + G + +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 252 VTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIE 311
++ + +++CS + G +L+N + ++ L+D+ + R AF I +
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 312 GLGVKLSLSVWGPLLAGCNVHGNAD 336
+ K ++ W ++AG +G D
Sbjct: 397 RMSNK-TVVTWNSIVAGYVENGEVD 420
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 160/353 (45%), Gaps = 50/353 (14%)
Query: 17 RDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM 76
+D+ ++V A+ G +D AR +FD M RNVVSW +MI GYA+ +A++LF RM
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 77 PERDMASWN----------------------------------------AMLTGFFQNGE 96
+ + N A++ + +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
++ A++LF E ++ +M + Y + GL+ EAL +F M + G++P+ + ++ +
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM-DSGVRPDRISMLSAIS 345
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
+CS L ++ G+ H + + GF+ + +ALI+MY KC A +IFD + + +
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR--MSNKTV 403
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
++WN ++A Y +G + A F M E N V++ +++ L +E I+ F
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPE----KNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLL 326
+ + + CG G L A +Y IE G++L + + L+
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 44/296 (14%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M + V +W ++V G ++G +D A F+ MP +N+VSWN +I+G Q +EA+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 71 ELFERMPER-----------------------DMASW-----------------NAMLTG 90
E+F M + D+A W ++
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
F + G+ A +F L +DV WT+ + A G +E A+++F M GLKP+
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM-IEQGLKPDGVA 573
Query: 151 FVTVLGACSGLASLTEGQQI-HQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
FV L ACS + +G++I + ++ G ++++ + G L A ++ +D
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
+ D+I WN ++AA G A K+Q L + +YV L + AG
Sbjct: 634 PMEPNDVI-WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG-SYVLLSNVYASAG 687
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 242/432 (56%), Gaps = 21/432 (4%)
Query: 22 WTTMVDGLAKSGRIDDARALFDRMPLRNVV---------------SW----NAMITGYAQ 62
+ M+D + RI A+ LRN++ SW NA+I Y +
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 63 NRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
R D A +F+RM + + +WN+++ G+ +NGE++ A + F +P+K++++W ++++G
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
Q L EEA+++F MQ+ G+ + T +++ AC L +L + I+ I K G Q +
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
R+ + L++M+S+CG+ A IF+ L RD+ +W I A A G AI LF+ M
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
E G + + V +V LTACSH GLV +G + F +LK + ++ HY C+VDL GRAG
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNM 362
L+EA +IE + ++ + +W LLA C V GN ++ A+KI + E G+Y LLSN+
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682
Query: 363 YASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGL 422
YAS G+W + A VR+ MK+KGL+K PG S I++ F GD+SH + +E +L +
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEV 742
Query: 423 HTKMKKFGDILD 434
+ G + D
Sbjct: 743 SQRASHLGHVPD 754
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 173/325 (53%), Gaps = 16/325 (4%)
Query: 22 WTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEALELFER 75
+ +++ G A SG ++A LF RM P + + ++ A++R +++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFG--LSACAKSRAKGNGIQIHGL 159
Query: 76 MPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEA 131
+ + +D+ N+++ + + GEL+ A K+F E+ +++V++WTSM+ GYA+ +++A
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 132 LKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALIN 191
+ +F +M + + PN+ T V V+ AC+ L L G++++ I +G + N +VSAL++
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 192 MYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAND 251
MY KC + +A+++FD+ DL N M + Y G EA+ +FN M + G + +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 252 VTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIE 311
++ + +++CS + G +L+N + ++ L+D+ + R AF I +
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 312 GLGVKLSLSVWGPLLAGCNVHGNAD 336
+ K ++ W ++AG +G D
Sbjct: 397 RMSNK-TVVTWNSIVAGYVENGEVD 420
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 160/353 (45%), Gaps = 50/353 (14%)
Query: 17 RDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM 76
+D+ ++V A+ G +D AR +FD M RNVVSW +MI GYA+ +A++LF RM
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 77 PERDMASWN----------------------------------------AMLTGFFQNGE 96
+ + N A++ + +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
++ A++LF E ++ +M + Y + GL+ EAL +F M + G++P+ + ++ +
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM-DSGVRPDRISMLSAIS 345
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
+CS L ++ G+ H + + GF+ + +ALI+MY KC A +IFD + + +
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR--MSNKTV 403
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
++WN ++A Y +G + A F M E N V++ +++ L +E I+ F
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPE----KNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLL 326
+ + + CG G L A +Y IE G++L + + L+
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 44/296 (14%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M + V +W ++V G ++G +D A F+ MP +N+VSWN +I+G Q +EA+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 71 ELFERMPER-----------------------DMASW-----------------NAMLTG 90
E+F M + D+A W ++
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
F + G+ A +F L +DV WT+ + A G +E A+++F M GLKP+
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM-IEQGLKPDGVA 573
Query: 151 FVTVLGACSGLASLTEGQQI-HQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
FV L ACS + +G++I + ++ G ++++ + G L A ++ +D
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
+ D+I WN ++AA G A K+Q L + +YV L + AG
Sbjct: 634 PMEPNDVI-WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG-SYVLLSNVYASAG 687
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 279 bits (714), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 238/431 (55%), Gaps = 44/431 (10%)
Query: 38 ARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM--------PER---------- 79
A LFD MP R++VSWN++I+GY+ L + E+ RM P
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 80 -----------------------DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWT 116
++ NA + + + G+L + KLF +L K++++W
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 117 SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK 176
+M+ + Q+GL+E+ L F M G +P+ TF+ VL +C + + Q IH LI
Sbjct: 205 TMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMF 263
Query: 177 TGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAI 236
GF N + +AL+++YSK G L + +F + + D ++W M+AAYA HG+G +AI
Sbjct: 264 GGFSGNKCITTALLDLYSKLGRLEDSSTVFHE--ITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 237 NLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDL 296
F M G + VT+ LL ACSH+GLV+EG YF+ + K I + DHY+C+VDL
Sbjct: 322 KHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDL 381
Query: 297 CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTY 356
GR+G L++A+ +I+ + ++ S VWG LL C V+ + +G A+++ ++E + Y
Sbjct: 382 LGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNY 441
Query: 357 SLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLE 416
+LSN+Y++ G WK+A+ +R MK KGL + GCS+IE GN + FVVGD SH +SE ++
Sbjct: 442 VMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQ 501
Query: 417 YLLLGLHTKMK 427
L + KMK
Sbjct: 502 KKLKEIRKKMK 512
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 248/452 (54%), Gaps = 45/452 (9%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------ 76
+ +VD K G+ +A+ + DR+ ++VV A+I GY+Q EA++ F+ M
Sbjct: 205 SALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQ 264
Query: 77 P---------------------------------ERDMASWNAMLTGFFQNGELNRAEKL 103
P E +AS ++LT + + ++ + ++
Sbjct: 265 PNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRV 324
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F + + ++WTS+++G Q+G E AL F KM + +KPN+ T + L CS LA
Sbjct: 325 FKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS-IKPNSFTLSSALRGCSNLAM 383
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
EG+QIH +++K GF + S LI++Y KCG +AR +FD L + D+IS N MI
Sbjct: 384 FEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDT--LSEVDVISLNTMI 441
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
+YA +G+G EA++LF +M LG Q NDVT + +L AC+++ LV+EG + FD K++ I
Sbjct: 442 YSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDK-I 500
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
+ DHYAC+VDL GRAGRL+EA + + + L +W LL+ C VH ++ + + +
Sbjct: 501 MLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITR 559
Query: 344 KILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFV 403
KIL++E + GT L+SN+YAS GKW ++ KMKD LKK P SW+E+ F+
Sbjct: 560 KILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFM 619
Query: 404 VGDK-SHSQSEMLEYLLLGLHTKMKKFGDILD 434
GD SH SE + L L K K G + D
Sbjct: 620 AGDLFSHPNSEQILENLEELIKKSKDLGYVED 651
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 48/323 (14%)
Query: 21 SWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERD 80
S + +VD K G ID AR +FD M R++V+WN++I ++RR EA+E++ M +
Sbjct: 101 SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNN 160
Query: 81 MASWNAMLTGFFQN----------------------------------------GELNRA 100
+ L+ F+ G+ A
Sbjct: 161 VLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREA 220
Query: 101 EKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSG 160
+ + + +KDV+ T+++ GY+Q G EA+K F M ++PN T+ +VL +C
Sbjct: 221 KLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVE-KVQPNEYTYASVLISCGN 279
Query: 161 LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWN 220
L + G+ IH L+ K+GF+ ++L+ MY +C + + ++F + + +SW
Sbjct: 280 LKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFK--CIEYPNQVSWT 337
Query: 221 GMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN 280
+I+ +G A+ F KM + N T L CS+ + +EG Q + K
Sbjct: 338 SLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK- 396
Query: 281 RSIQVKEDHYA--CLVDLCGRAG 301
D YA L+DL G+ G
Sbjct: 397 --YGFDRDKYAGSGLIDLYGKCG 417
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/477 (31%), Positives = 259/477 (54%), Gaps = 61/477 (12%)
Query: 11 FNQMQERDVSSWTTMVDGL--------------------------------------AKS 32
FNQM +R+ SW T++ G AK+
Sbjct: 82 FNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKT 141
Query: 33 GRIDDARALF----------DRMPLRNVVSWNAMITGYAQNRRL---------DEALELF 73
G+I + + + D + N+V M G+ ++ R+ D +
Sbjct: 142 GKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM-CGFMKDARVLFYKNIIEKDMVVMTD 200
Query: 74 ERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALK 133
R + ++ WN M+ G+ + G+ A LF ++ Q+ V++W +M++GY+ +G ++A++
Sbjct: 201 RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVE 260
Query: 134 MFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMY 193
+F +M+ G ++PN T V+VL A S L SL G+ +H +G + + + SALI+MY
Sbjct: 261 VFREMK-KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 319
Query: 194 SKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVT 253
SKCG + A +F+ L + ++I+W+ MI +A HG +AI+ F KM++ G + +DV
Sbjct: 320 SKCGIIEKAIHVFER--LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 254 YVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL 313
Y+ LLTACSH GLV+EG +YF +++ ++ + +HY C+VDL GR+G L EA I +
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 314 GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAA 373
+K +W LL C + GN ++GK VA ++ + ++G Y LSNMYAS G W E +
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 374 NVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFG 430
+R++MK+K ++K PGCS I++ + FVV D SH +++ + +L+ + K++ G
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 145/292 (49%), Gaps = 47/292 (16%)
Query: 89 TGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEE--ALKMFTKMQANGGLKP 146
T + +L+ A K+F ++PQ++ +W +++ G+++ + A+ +F +M ++ ++P
Sbjct: 67 TSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEP 126
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
N TF +VL AC+ + EG+QIH L K GF + V+S L+ MY CG + AR +F
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
Query: 207 DDGLL-------------------------------------------RQRDLISWNGMI 223
++ RQR ++SWN MI
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 246
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
+ Y+ +G+ +A+ +F +M++ + N VT V +L A S G ++ G ++ ++ I
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGI 305
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
++ + + L+D+ + G +++A ++ E L + ++ W ++ G +HG A
Sbjct: 306 RIDDVLGSALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIHGQA 356
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 124/235 (52%), Gaps = 11/235 (4%)
Query: 5 RGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP---LR-NVVSWNAMITGY 60
+ M F++M++R V SW TM+ G + +G DA +F M +R N V+ +++
Sbjct: 225 KAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAI 284
Query: 61 AQ--NRRLDEALELF--ERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWT 116
++ + L E L L+ + D +A++ + + G + +A +F LP+++VITW+
Sbjct: 285 SRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWS 344
Query: 117 SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ-IHQLIS 175
+M+ G+A HG + +A+ F KM+ G++P++ ++ +L ACS + EG++ Q++S
Sbjct: 345 AMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVS 403
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
G + ++++ + G L A + + ++ D+I W ++ A G
Sbjct: 404 VDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI-WKALLGACRMQG 457
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 245/459 (53%), Gaps = 44/459 (9%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------P- 77
+V +K +++A +FD RN ++W+AM+TGY+QN EA++LF RM P
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPS 321
Query: 78 --------------------------------ERDMASWNAMLTGFFQNGELNRAEKLFA 105
ER + + A++ + + G L A K F
Sbjct: 322 EYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFD 381
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
L ++DV WTS+++GY Q+ +EEAL ++ +M+ G+ PN+ T +VL ACS LA+L
Sbjct: 382 CLQERDVALWTSLISGYVQNSDNEEALILYRRMK-TAGIIPNDPTMASVLKACSSLATLE 440
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G+Q+H K GF + SAL MYSKCG L +F +D++SWN MI+
Sbjct: 441 LGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRR--TPNKDVVSWNAMISG 498
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
+H+G G+EA+ LF +M G + +DVT+V +++ACSH G V+ G YF+ + +
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
K DHYAC+VDL RAG+LKEA IE + L +W LL+ C HG ++G +K+
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKL 618
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVG 405
+ + + TY LS +Y ++G+ ++ V M+ G+ K+ GCSWIE+ N VFVVG
Sbjct: 619 MALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVG 678
Query: 406 DKSHSQSEMLEYLLLGLHTKM--KKFGDILDDDLSRDVE 442
D H E + L+ + +M + F +LD + E
Sbjct: 679 DTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFVEEEE 717
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 182/360 (50%), Gaps = 46/360 (12%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELF---- 73
D+ T++V K+G ++D +F MP RN +W+ M++GYA R++EA+++F
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 74 ---ERMPERD----------------------------------MASWNAMLTGFFQNGE 96
E + D +A NA++T + +
Sbjct: 212 REKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
LN A K+F ++ ITW++M+TGY+Q+G S EA+K+F++M + G+KP+ T V VL
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM-FSAGIKPSEYTIVGVLN 330
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
ACS + L EG+Q+H + K GF+ + +AL++MY+K G L ARK FD L++RD+
Sbjct: 331 ACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFD--CLQERDV 388
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
W +I+ Y + EA+ L+ +M+ G ND T +L ACS ++ G Q
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+K+ ++ + L + + G L++ + K +S W +++G + +G D
Sbjct: 449 TIKH-GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS-WNAMISGLSHNGQGD 506
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 174/352 (49%), Gaps = 55/352 (15%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA---LELFERMPERD 80
+V+ AK G++ A ++F+ + ++VVSWN++ITGY+QN + + ++LF M +D
Sbjct: 54 VLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQD 113
Query: 81 MASWNAMLTGFF------QNGELNRAE--------------------------------- 101
+ L G F Q+ + R
Sbjct: 114 ILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL 173
Query: 102 KLFAELPQKDVITWTSMMTGYAQHGLSEEALK---MFTKMQANGGLKPNNGTFVTVLGAC 158
K+FA +P+++ TW++M++GYA G EEA+K +F + + G ++ F VL +
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEG--SDSDYVFTAVLSSL 231
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ + G+QIH + K G + +AL+ MYSKC L+ A K+FD R+ I+
Sbjct: 232 AATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSS--GDRNSIT 289
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
W+ M+ Y+ +G EA+ LF++M G + ++ T V +L ACS ++EG Q LL
Sbjct: 290 WSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL 349
Query: 279 KNRSIQVKEDHYA--CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
K + + +A LVD+ +AG L +A + L + +++W L++G
Sbjct: 350 K---LGFERHLFATTALVDMYAKAGCLADARKGFDCLQER-DVALWTSLISG 397
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 128/256 (50%), Gaps = 10/256 (3%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHG---LSEEALKMFTKMQAN 141
N ++ + + G+L +A +F + KDV++W S++TGY+Q+G S +++F +M+A
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
L PN T + A S L S T G+Q H L+ K + V ++L+ MY K G +
Sbjct: 113 DIL-PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVED 171
Query: 202 ARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYV--ELLT 259
K+F + +R+ +W+ M++ YA G EAI +FN + +D YV +L+
Sbjct: 172 GLKVF--AYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLS 229
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSL 319
+ + V G Q +KN + A LV + + L EA + + G + S+
Sbjct: 230 SLAATIYVGLGRQIHCITIKNGLLGFVALSNA-LVTMYSKCESLNEACKMFDSSGDRNSI 288
Query: 320 SVWGPLLAGCNVHGNA 335
+ W ++ G + +G +
Sbjct: 289 T-WSAMVTGYSQNGES 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 21/258 (8%)
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR 203
L P+ T + L S +L G+ +H I +TG + + L+N Y+KCG+L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHG---YGNEAINLFNKMQELGFQANDVTYVELLTA 260
IF+ + +D++SWN +I Y+ +G + LF +M+ N T + A
Sbjct: 70 SIFNAIIC--KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 261 CSHAGLVDEGIQYFDKLLKNRSIQVKEDHY--ACLVDLCGRAGRLKEAFYIIEGLGVKLS 318
S G Q ++K S D Y LV + +AG +++ + + + +
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFG---DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 319 LSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMK 378
+ W +++G G + V L+ + E + + + + + +S+ AA + +
Sbjct: 185 YT-WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSL-----AATIYV- 237
Query: 379 MKDKGLKKQPGCSWIEVG 396
GL +Q C I+ G
Sbjct: 238 ----GLGRQIHCITIKNG 251
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 224/371 (60%), Gaps = 11/371 (2%)
Query: 30 AKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLT 89
A G + A LFD + V+W++M +GYA+ ++DEA+ LF+ MP +D +WN M+T
Sbjct: 158 ANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMIT 217
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
G + E++ A +LF +KDV+TW +M++GY G +EAL +F +M+ + G P+
Sbjct: 218 GCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMR-DAGEHPDVV 276
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQEN-----TRVVSALINMYSKCGELHIARK 204
T +++L AC+ L L G+++H I +T + T + +ALI+MY+KCG + A +
Sbjct: 277 TILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIE 336
Query: 205 IFDDGLLRQRDLISWNGMIAAYA-HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
+F ++ RDL +WN +I A HH G +I +F +MQ L N+VT++ ++ ACSH
Sbjct: 337 VFRG--VKDRDLSTWNTLIVGLALHHAEG--SIEMFEEMQRLKVWPNEVTFIGVILACSH 392
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWG 323
+G VDEG +YF + +I+ HY C+VD+ GRAG+L+EAF +E + ++ + VW
Sbjct: 393 SGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWR 452
Query: 324 PLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 383
LL C ++GN ++GK +K+L + + +G Y LLSN+YAS G+W VR D
Sbjct: 453 TLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTR 512
Query: 384 LKKQPGCSWIE 394
+KK G S IE
Sbjct: 513 VKKPTGVSLIE 523
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 141/299 (47%), Gaps = 21/299 (7%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G L A KLF E+P+ DV ++ G AQ E+ + ++T+M+ G + P+ TF V
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRG-VSPDRYTFTFV 118
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
L ACS L + G H + + GF N V +ALI ++ CG+L IA ++FDD +
Sbjct: 119 LKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHK 178
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
++W+ M + YA G +EA+ LF++M + V + ++T C +D + F
Sbjct: 179 --VAWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSARELF 232
Query: 275 DKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNV 331
D+ + + + ++ G KEA I + + G + LL+ C V
Sbjct: 233 DRFTEKDVVT-----WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 332 HGNADIGKLVAKKILKVEHENAGTY------SLLSNMYASVGKWKEAANVRMKMKDKGL 384
G+ + GK + IL+ ++ Y + L +MYA G A V +KD+ L
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 147/322 (45%), Gaps = 56/322 (17%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M +D +W M+ G K +D AR LFDR ++VV+WNAMI+GY EAL
Sbjct: 201 FDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 71 ELFERMPER---------------------------------DMAS-----------WNA 86
+F+ M + + AS WNA
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 87 MLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK- 145
++ + + G ++RA ++F + +D+ TW +++ G A H +E +++MF +MQ LK
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQR---LKV 376
Query: 146 -PNNGTFVTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGELHIAR 203
PN TF+ V+ ACS + EG++ L+ + N + +++M + G+L A
Sbjct: 377 WPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAF 436
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDV-TYVELLTACS 262
+F + + + + I W ++ A YGN + + + L + ++ YV L +
Sbjct: 437 -MFVESMKIEPNAIVWRTLLGACKI--YGNVELGKYANEKLLSMRKDESGDYVLLSNIYA 493
Query: 263 HAGLVDEGIQYFDKLLKNRSIQ 284
G D G+Q K+ + ++
Sbjct: 494 STGQWD-GVQKVRKMFDDTRVK 514
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 254/474 (53%), Gaps = 64/474 (13%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
DV +D K + +A +FD M R+ VSWNA+I + QN + E L LF M
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 77 -----PER-----------------------------------------DMASWNAML-- 88
P+ DM S M+
Sbjct: 476 RSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 535
Query: 89 -----TGFFQ----NGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
+ FFQ +G + EK+ + Q+ ++W S+++GY SE+A +FT+M
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
G+ P+ T+ TVL C+ LAS G+QIH + K Q + + S L++MYSKCG+L
Sbjct: 596 -EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDL 654
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
H +R +F+ L +RD ++WN MI YAHHG G EAI LF +M + N VT++ +L
Sbjct: 655 HDSRLMFEKSL--RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILR 712
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSL 319
AC+H GL+D+G++YF + ++ + + HY+ +VD+ G++G++K A +I + +
Sbjct: 713 ACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADD 772
Query: 320 SVWGPLLAGCNVH-GNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMK 378
+W LL C +H N ++ + +L+++ +++ Y+LLSN+YA G W++ +++R
Sbjct: 773 VIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRN 832
Query: 379 MKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGL-HTKMKKFGD 431
M+ LKK+PGCSW+E+ + + VF+VGDK+H + E + Y LGL +++MK F D
Sbjct: 833 MRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEI-YEELGLIYSEMKPFDD 885
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 187/364 (51%), Gaps = 52/364 (14%)
Query: 8 TMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLD 67
+M F++M RDV SW M++G +KS + A + F+ MP+R+VVSWN+M++GY QN
Sbjct: 103 SMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL 162
Query: 68 EALELFERM---------------------------------------PERDMASWNAML 88
+++E+F M + D+ + +A+L
Sbjct: 163 KSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALL 222
Query: 89 TGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ-ANGGLKPN 147
+ + + ++F +P+K+ ++W++++ G Q+ L ALK F +MQ N G+ +
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV--S 280
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD 207
+ +VL +C+ L+ L G Q+H K+ F + V +A ++MY+KC + A+ +FD
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 208 DG--LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
+ L RQ S+N MI Y+ +G +A+ LF+++ G ++++ + AC+
Sbjct: 341 NSENLNRQ----SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 396
Query: 266 LVDEGIQYFDKLLKNR-SIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
+ EG+Q + +K+ S+ V + A +D+ G+ L EAF + + + + ++S W
Sbjct: 397 GLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMRRRDAVS-WNA 453
Query: 325 LLAG 328
++A
Sbjct: 454 IIAA 457
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 182/426 (42%), Gaps = 67/426 (15%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER--- 79
T +D AK + DA+ LFD N S+NAMITGY+Q +AL LF R+
Sbjct: 320 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 379
Query: 80 ------------------------------------DMASWNAMLTGFFQNGELNRAEKL 103
D+ NA + + + L A ++
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 439
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F E+ ++D ++W +++ + Q+G E L +F M ++P+ TF ++L AC+G S
Sbjct: 440 FDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM-LRSRIEPDEFTFGSILKACTG-GS 497
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR----------- 212
L G +IH I K+G N+ V +LI+MYSKCG + A KI R
Sbjct: 498 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELE 557
Query: 213 -------QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
Q +SWN +I+ Y +A LF +M E+G + TY +L C++
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 266 LVDEGIQYFDKLLKNRSIQVKEDHYAC--LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWG 323
G Q +++K +++ D Y C LVD+ + G L ++ + E ++ W
Sbjct: 618 SAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWN 673
Query: 324 PLLAGCNVHGNADIG-KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMK-D 381
++ G HG + +L + IL+ N T+ + A +G + MK D
Sbjct: 674 AMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRD 733
Query: 382 KGLKKQ 387
GL Q
Sbjct: 734 YGLDPQ 739
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 133/256 (51%), Gaps = 7/256 (2%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRL 66
NQ+ ++++ + AK G ++ + M + N ++ Y +R
Sbjct: 40 LNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 99
Query: 67 DEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHG 126
A +F++MP RD+ SWN M+ G+ ++ ++ +A F +P +DV++W SM++GY Q+G
Sbjct: 100 VSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG 159
Query: 127 LSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV 186
S +++++F M G++ + TF +L CS L + G QIH ++ + G +
Sbjct: 160 ESLKSIEVFVDM-GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAA 218
Query: 187 SALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG 246
SAL++MY+K + ++F + +++ +SW+ +IA + + A+ F +MQ++
Sbjct: 219 SALLDMYAKGKRFVESLRVFQG--IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN 276
Query: 247 FQANDVTYVELLTACS 262
+ Y +L +C+
Sbjct: 277 AGVSQSIYASVLRSCA 292
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 160/331 (48%), Gaps = 46/331 (13%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
+ DV + + ++D AK R ++ +F +P +N VSW+A+I G QN L AL+ F+
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 76 MPE--------------RDMASWN-----------AMLTGFFQNG--------------E 96
M + R A+ + A+ + F +G
Sbjct: 272 MQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDN 331
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
+ A+ LF + ++ +M+TGY+Q +AL +F ++ ++G L + + V
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG-LGFDEISLSGVFR 390
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
AC+ + L+EG QI+ L K+ + V +A I+MY KC L A ++FD+ +R+RD
Sbjct: 391 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE--MRRRDA 448
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+SWN +IAA+ +G G E + LF M + ++ T+ +L AC+ G + G++
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSS 507
Query: 277 LLKNRSIQVKEDHYAC-LVDLCGRAGRLKEA 306
++K S C L+D+ + G ++EA
Sbjct: 508 IVK--SGMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 30/144 (20%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
+ DV +T+VD +K G + D+R +F++ R+ V+WNAMI GYA + + +EA++LFER
Sbjct: 635 QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER 694
Query: 76 MPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMF 135
M +N + N +T+ S++ A GL ++ L+ F
Sbjct: 695 M--------------ILENIKPNH-------------VTFISILRACAHMGLIDKGLEYF 727
Query: 136 TKMQANGGLK---PNNGTFVTVLG 156
M+ + GL P+ V +LG
Sbjct: 728 YMMKRDYGLDPQLPHYSNMVDILG 751
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNR 64
+ F + RD +W M+ G A G+ ++A LF+RM L N+ V++ +++ A
Sbjct: 659 LMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 718
Query: 65 RLDEALELFERMPERD------MASWNAMLTGFFQNGELNRAEKLFAELP-QKDVITWTS 117
+D+ LE F M +RD + ++ M+ ++G++ RA +L E+P + D + W +
Sbjct: 719 LIDKGLEYFYMM-KRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 777
Query: 118 MMTGYAQH----GLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
++ H ++EEA + L P + + T+L
Sbjct: 778 LLGVCTIHRNNVEVAEEATAALLR------LDPQDSSAYTLLS 814
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 236/382 (61%), Gaps = 12/382 (3%)
Query: 17 RDVSSWTTMVDGLAKSGRIDDARALFDRMP--LRNVVSWNAMITGYAQNRRLDEALELFE 74
R+ +W M+ G K I+ AR LF+RMP L+NV +W+ M+ Y NR++++A + FE
Sbjct: 142 RNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFE 201
Query: 75 RMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKM 134
+PE++ W+ M++G+F+ G+++ A +F + +D++ W +++ GYAQ+G S++A+
Sbjct: 202 DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDA 261
Query: 135 FTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYS 194
F MQ G +P+ T ++L AC+ L G+++H LI+ G + N V +ALI+MY+
Sbjct: 262 FFNMQGE-GYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320
Query: 195 KCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTY 254
KCG+L A +F+ + R + N MI+ A HG G EA+ +F+ M+ L + +++T+
Sbjct: 321 KCGDLENATSVFES--ISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
Query: 255 VELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLG 314
+ +LTAC H G + EG++ F + +K + ++ H+ CL+ L GR+G+LKEA+ +++ +
Sbjct: 379 IAVLTACVHGGFLMEGLKIFSE-MKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 437
Query: 315 VKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYS-----LLSNMYASVGKW 369
VK + +V G LL C VH + ++ + V KI++ +YS +SN+YA +W
Sbjct: 438 VKPNDTVLGALLGACKVHMDTEMAEQVM-KIIETAGSITNSYSENHLASISNLYAHTERW 496
Query: 370 KEAANVRMKMKDKGLKKQPGCS 391
+ A +R++M+ +GL+K PG S
Sbjct: 497 QTAEALRVEMEKRGLEKSPGLS 518
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 40/246 (16%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F + E++ W+ M+ G + G + +ARA+F R+ R++V WN +I GYAQN D+A+
Sbjct: 200 FEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAI 259
Query: 71 ELFERM------PE--------------------RDMASW-------------NAMLTGF 91
+ F M P+ R++ S NA++ +
Sbjct: 260 DAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMY 319
Query: 92 FQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
+ G+L A +F + + V SM++ A HG +EAL+MF+ M++ LKP+ TF
Sbjct: 320 AKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESL-DLKPDEITF 378
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL 211
+ VL AC L EG +I + + N + LI++ + G+L A ++ + +
Sbjct: 379 IAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHV 438
Query: 212 RQRDLI 217
+ D +
Sbjct: 439 KPNDTV 444
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS-LTEGQQIHQLI 174
++++ + G +AL ++ ++ G P G +L AC+ + + G+ +H
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFP--GWVPLILRACACVVPRVVLGKLLHSES 72
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNE 234
K G + V S+LI+MY KCG + ARK+FD+ + +R++ +WN MI Y +G
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDE--MPERNVATWNAMIGGYMSNGDAVL 130
Query: 235 AINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL---LKN 280
A LF +E+ N VT++E++ +++ + F+++ LKN
Sbjct: 131 ASGLF---EEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKN 176
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/454 (33%), Positives = 251/454 (55%), Gaps = 44/454 (9%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMP-LRNVVSWNAMITGYAQNRRLDEALELFE 74
+ +++ M+ A G + DA+ +FD + ++++SWN+MI G++++ + A ELF
Sbjct: 235 QHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFI 294
Query: 75 RMP----ERDMASWNAMLTGF-------------------------------------FQ 93
+M E D+ ++ +L+ F
Sbjct: 295 QMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFP 354
Query: 94 NGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVT 153
G + A LF L KD+I+W S++TG+AQ GLSE+A+K F+ ++++ +K ++ F
Sbjct: 355 TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE-IKVDDYAFSA 413
Query: 154 VLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ 213
+L +CS LA+L GQQIH L +K+GF N V+S+LI MYSKCG + ARK F + +
Sbjct: 414 LLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQ-ISSK 472
Query: 214 RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQY 273
++WN MI YA HG G +++LF++M + + VT+ +LTACSH GL+ EG++
Sbjct: 473 HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
Query: 274 FDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ + IQ + +HYA VDL GRAG + +A +IE + + V L C G
Sbjct: 533 LNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACG 592
Query: 334 NADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWI 393
++ VA +L++E E+ TY LS+MY+ + KW+E A+V+ MK++G+KK PG SWI
Sbjct: 593 EIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
Query: 394 EVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMK 427
E+ N V+ F D+S+ + + ++ L +M+
Sbjct: 653 EIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 129/284 (45%), Gaps = 40/284 (14%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
D+ ++D K G + A LFD MP R+ VSWN MI+GY +L++A LF M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 77 ---PERDMASWNAMLTGF-----FQNGE------------------------------LN 98
+ D S++ +L G F GE +
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
A + F E+ + + ++W +++ G+ Q + A + M+ + + GTF +L
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+Q+H + K G Q + +A+I+ Y+ CG + A+++FD GL +DLIS
Sbjct: 214 DDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD-GLGGSKDLIS 272
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
WN MIA ++ H A LF +MQ + + TY LL+ACS
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 9/256 (3%)
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
D+ N +L + + G L A LF E+P++D ++W +M++GY G E+A +FT M+
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
+G + +F +L + + G+Q+H L+ K G++ N V S+L++MY+KC +
Sbjct: 94 RSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDV-TYVELL 258
A + F + + + + +SWN +IA + A L M+ D T+ LL
Sbjct: 153 EDAFEAFKE--ISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC--LVDLCGRAGRLKEAFYIIEGLGVK 316
T + Q K+LK + ++ + C ++ G + +A + +GLG
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLK---LGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGS 267
Query: 317 LSLSVWGPLLAGCNVH 332
L W ++AG + H
Sbjct: 268 KDLISWNSMIAGFSKH 283
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRL 66
F ++ +D+ SW +++ G A+ G +DA F + + +++A++ + L
Sbjct: 365 FESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATL 424
Query: 67 DEALELFERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQK-DVITWTSMMTG 121
++ + S ++++ + + G + A K F ++ K + W +M+ G
Sbjct: 425 QLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILG 484
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT-GFQ 180
YAQHGL + +L +F++M N +K ++ TF +L ACS + EG ++ L+ Q
Sbjct: 485 YAQHGLGQVSLDLFSQM-CNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQ 543
Query: 181 ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI 217
+A +++ + G ++ A+++ + L ++
Sbjct: 544 PRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMV 580
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 271 bits (693), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 236/433 (54%), Gaps = 43/433 (9%)
Query: 17 RDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM 76
RD S ++D +K R+ + R LFD MP + VS+N +I+ Y+Q + + +L F M
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 77 ----------PERDMASWNAMLTGFFQNGELN---------------------------- 98
P M S A L+ +L+
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMF 402
Query: 99 -RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGA 157
AE +F LPQ+ ++WT++++GY Q GL LK+FTKM+ + L+ + TF TVL A
Sbjct: 403 EEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQSTFATVLKA 461
Query: 158 CSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI 217
+ ASL G+Q+H I ++G EN S L++MY+KCG + A ++F++ + R+ +
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE--MPDRNAV 519
Query: 218 SWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
SWN +I+A+A +G G AI F KM E G Q + V+ + +LTACSH G V++G +YF +
Sbjct: 520 SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM 579
Query: 278 LKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADI 337
I K+ HYAC++DL GR GR EA +++ + + +W +L C +H N +
Sbjct: 580 SPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSL 639
Query: 338 GKLVAKKILKVEH-ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVG 396
+ A+K+ +E +A Y +SN+YA+ G+W++ +V+ M+++G+KK P SW+EV
Sbjct: 640 AERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVN 699
Query: 397 NTVQVFVVGDKSH 409
+ + VF D++H
Sbjct: 700 HKIHVFSSNDQTH 712
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 207/452 (45%), Gaps = 86/452 (19%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
+++M ++ S TM+ G K+G + AR LFD MP R VV+W ++ YA+N DEA
Sbjct: 71 YDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAF 130
Query: 71 ELFERM--------PER-----------DMASWNA------------------------M 87
+LF +M P+ D NA +
Sbjct: 131 KLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVL 190
Query: 88 LTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPN 147
L + + L+ A LF E+P+KD +T+ +++TGY + GL E++ +F KM+ +G +P+
Sbjct: 191 LKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH-QPS 249
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD 207
+ TF VL A GL GQQ+H L TGF + V + +++ YSK + R +FD
Sbjct: 250 DFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD 309
Query: 208 DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
+ + + D +S+N +I++Y+ +++ F +MQ +GF + + +L+ ++ +
Sbjct: 310 E--MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367
Query: 268 DEGIQYFDKLLKNRSIQVKEDHYA-CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLL 326
G Q + L + + H LVD+ + +EA I + L + ++S W L+
Sbjct: 368 QMGRQLHCQALLATADSIL--HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALI 424
Query: 327 AGC---NVHG--------------NAD------------------IGKLVAKKILKVEH- 350
+G +HG AD +GK + I++ +
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 351 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
EN + S L +MYA G K+A V +M D+
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 123/230 (53%), Gaps = 12/230 (5%)
Query: 37 DARAL---FDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQ 93
DAR + FD R+ N ++ + ++ A ++++ MP ++ S N M++G +
Sbjct: 36 DARIIKTGFDTDTCRS----NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 94 NGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM-QANGGLKPNNGTFV 152
G+++ A LF +P + V+TWT +M YA++ +EA K+F +M +++ P++ TF
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 153 TVLGACSGLASLTEGQQIHQLISKTGFQENT--RVVSALINMYSKCGELHIARKIFDDGL 210
T+L C+ Q+H K GF N V + L+ Y + L +A +F++
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE-- 209
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA 260
+ ++D +++N +I Y G E+I+LF KM++ G Q +D T+ +L A
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 250/456 (54%), Gaps = 48/456 (10%)
Query: 24 TMVDGLAKSGRIDDARALFDRM-PLRNVVSWNAMITGYAQNRRLDEALELFERMPER--- 79
V +K G + +A ++F M LR+ VSWN+MI Y Q++ +AL L++ M +
Sbjct: 178 AFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFK 237
Query: 80 -DMASWNAML---------------------TGFFQNGELNR-----------------A 100
DM + ++L GF QN + +
Sbjct: 238 IDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDS 297
Query: 101 EKLFAELPQKDVITWTSMMTGYAQHG-LSEEALKMFTKMQANGGLKPNNGTFVTVLGACS 159
EK+F E+ D++ W +M++GY+ + LSEEA+K F +MQ G +P++ +FV V ACS
Sbjct: 298 EKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACS 356
Query: 160 GLASLTEGQQIHQLISKTGFQEN-TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
L+S ++ +QIH L K+ N V +ALI++Y K G L AR +FD + + + +S
Sbjct: 357 NLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR--MPELNAVS 414
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
+N MI YA HG+G EA+ L+ +M + G N +T+V +L+AC+H G VDEG +YF+ +
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
+ I+ + +HY+C++DL GRAG+L+EA I+ + K W LL C H N +
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534
Query: 339 KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNT 398
+ A +++ ++ A Y +L+NMYA KW+E A+VR M+ K ++K+PGCSWIEV
Sbjct: 535 ERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKK 594
Query: 399 VQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
VFV D SH + L + KMKK G ++D
Sbjct: 595 KHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMD 630
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 198/422 (46%), Gaps = 48/422 (11%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
AF +E +V S+ +V AK +I AR LFD +P + VS+N +I+GYA R A
Sbjct: 65 AFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAA 124
Query: 70 LELFERMPE------------------------RDMASW-------------NAMLTGFF 92
+ LF+RM + + + + NA +T +
Sbjct: 125 MVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYS 184
Query: 93 QNGELNRAEKLFAELPQ-KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
+ G L A +F + + +D ++W SM+ Y QH +AL ++ +M G K + T
Sbjct: 185 KGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK-GFKIDMFTL 243
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCG---ELHIARKIFDD 208
+VL A + L L G+Q H + K GF +N+ V S LI+ YSKCG ++ + K+F +
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 209 GLLRQRDLISWNGMIAAYA-HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
L DL+ WN MI+ Y+ + EA+ F +MQ +G + +D ++V + +ACS+
Sbjct: 304 IL--SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 268 DEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLA 327
+ Q +K+ + L+ L ++G L++A ++ + + +L+ + ++
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIK 420
Query: 328 GCNVHGNADIGKLVAKKILKVE-HENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
G HG+ L+ +++L N T+ + + A GK E MK+ K
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET-FKI 479
Query: 387 QP 388
+P
Sbjct: 480 EP 481
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 4/226 (1%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N + Y++ RL A F E ++ S+N ++ + ++ +++ A +LF E+PQ D +
Sbjct: 47 NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV 106
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
++ ++++GYA + A+ +F +M+ G + + T ++ AC L +Q+H
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMR-KLGFEVDGFTLSGLIAACCDRVDLI--KQLHCF 163
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
GF + V +A + YSK G L A +F G+ RD +SWN MI AY H G
Sbjct: 164 SVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF-YGMDELRDEVSWNSMIVAYGQHKEGA 222
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
+A+ L+ +M GF+ + T +L A + + G Q+ KL+K
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK 268
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 215/333 (64%), Gaps = 7/333 (2%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
++++ + +GE+ A K+F E+P+++V++WT+M++G+AQ + LK+++KM+ +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS- 217
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
PN+ TF +L AC+G +L +G+ +H G + + ++LI+MY KCG+L A +
Sbjct: 218 DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFN-KMQELGFQANDVTYVELLTACSH 263
IFD +D++SWN MIA YA HG +AI LF M + G + + +TY+ +L++C H
Sbjct: 278 IFDQ--FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRH 335
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWG 323
AGLV EG ++F+ L+ ++ + +HY+CLVDL GR G L+EA +IE + +K + +WG
Sbjct: 336 AGLVKEGRKFFN-LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWG 394
Query: 324 PLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 383
LL C VHG+ G A++ L +E + A T+ L+N+YASVG WKEAA VR MKDKG
Sbjct: 395 SLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKG 454
Query: 384 LKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLE 416
LK PGCSWIE+ N V +F D S+ + MLE
Sbjct: 455 LKTNPGCSWIEINNYVFMFKAEDGSNCR--MLE 485
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 121/228 (53%), Gaps = 9/228 (3%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRL 66
F +M ER+V SWT M+ G A+ R+D L+ +M N ++ A+++ + L
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 67 DEALELFERMPERDMASW----NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
+ + + + S+ N++++ + + G+L A ++F + KDV++W SM+ GY
Sbjct: 238 GQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
AQHGL+ +A+++F M G KP+ T++ VL +C + EG++ L+++ G +
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPE 357
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
S L+++ + G L A ++ ++ ++ +I W ++ + HG
Sbjct: 358 LNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVI-WGSLLFSCRVHG 404
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 22/178 (12%)
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAY 226
G H L K GF + + S+L+ +Y GE+ A K+F++ + +R+++SW MI+ +
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE--MPERNVVSWTAMISGF 196
Query: 227 AHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVK 286
A + + L++KM++ ND T+ LL+AC+ +G + +G RS+ +
Sbjct: 197 AQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG----------RSVHCQ 246
Query: 287 EDHYA---------CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
H L+ + + G LK+AF I + K +S W ++AG HG A
Sbjct: 247 TLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS-WNSMIAGYAQHGLA 303
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 239/446 (53%), Gaps = 46/446 (10%)
Query: 14 MQERDVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSW-------------- 53
+Q R+ WT ++ G A G+ D+A A++ M P+ S
Sbjct: 109 VQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLG 168
Query: 54 -------------------NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQN 94
N MI Y + +D A ++F+ MPERD+ SW ++ + +
Sbjct: 169 RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G + A +LF LP KD++ WT+M+TG+AQ+ +EAL+ F +M+ +G ++ + T
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG-IRADEVTVAGY 287
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVV--SALINMYSKCGELHIARKIFDDGLLR 212
+ AC+ L + + Q+ K+G+ + VV SALI+MYSKCG + A +F +
Sbjct: 288 ISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMS--MN 345
Query: 213 QRDLISWNGMIAAYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGI 271
+++ +++ MI A HG EA++LF+ M + + N VT+V L ACSH+GLVD+G
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 272 QYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNV 331
Q FD + + +Q DHY C+VDL GR GRL+EA +I+ + V+ VWG LL C +
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRI 465
Query: 332 HGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 391
H N +I ++ A+ + ++E + G Y LLSN+YAS G W VR +K+KGLKK P S
Sbjct: 466 HNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
Query: 392 WIEVGN-TVQVFVVGDKSHSQSEMLE 416
W+ N + F G+ +H S ++
Sbjct: 526 WVVDKNGQMHKFFPGNLNHPMSNKIQ 551
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 42/235 (17%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F++M ERDV SWT ++ A+ G ++ A LF+ +P +++V+W AM+TG+AQN + EA
Sbjct: 206 VFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEA 265
Query: 70 LELFERM-----------------------------------------PERDMASWNAML 88
LE F+RM P + +A++
Sbjct: 266 LEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALI 325
Query: 89 TGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
+ + G + A +F + K+V T++SM+ G A HG ++EAL +F M +KPN
Sbjct: 326 DMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNT 385
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGELHIA 202
TFV L ACS + +G+Q+ + +T G Q + ++++ + G L A
Sbjct: 386 VTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEA 440
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 39/286 (13%)
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS 159
A ++ + ++ WT+++ GYA G +EA+ M+ M+ + P + TF +L AC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEE-ITPVSFTFSALLKACG 160
Query: 160 GLASLTEGQQIH-QLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ L G+Q H Q GF V + +I+MY KC + ARK+FD+ + +RD+IS
Sbjct: 161 TMKDLNLGRQFHAQTFRLRGFC-FVYVGNTMIDMYVKCESIDCARKVFDE--MPERDVIS 217
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
W +IAAYA G A LF + + V + ++T + E ++YFD++
Sbjct: 218 WTELIAAYARVGNMECAAELFESLP----TKDMVAWTAMVTGFAQNAKPQEALEYFDRME 273
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
K+ I+ E A + C + G K AD
Sbjct: 274 KS-GIRADEVTVAGYISACAQLGASKY-----------------------------ADRA 303
Query: 339 KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+A+K ++ S L +MY+ G +EA NV M M +K +
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNV 349
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 256/469 (54%), Gaps = 40/469 (8%)
Query: 7 CTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRL 66
C ++++ DV T+++D +K G + A +F+ M RN+V+WN MI YA+N R+
Sbjct: 255 CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRV 314
Query: 67 DEALELFERMPERD------MASWN----------------AMLTGFFQN---------- 94
+A F++M E++ + S N AM GF +
Sbjct: 315 TDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 95 ----GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
G+L AE +F + +K+VI+W S++ Y Q+G + AL++F ++ + L P++ T
Sbjct: 375 YGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW-DSSLVPDSTT 433
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
++L A + SL+EG++IH I K+ + NT ++++L++MY+ CG+L ARK F+ L
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
L+ D++SWN +I AYA HG+G ++ LF++M N T+ LL ACS +G+VDEG
Sbjct: 494 LK--DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Query: 271 IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCN 330
+YF+ + + I +HY C++DL GR G A +E + + +WG LL
Sbjct: 552 WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASR 611
Query: 331 VHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 390
H + I + A++I K+EH+N G Y LL NMYA G+W++ +++ M+ KG+ +
Sbjct: 612 NHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSR 671
Query: 391 SWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLSR 439
S +E VF GD+SH + + Y +L + ++M DI +SR
Sbjct: 672 STVEAKGKSHVFTNGDRSHVATNKI-YEVLDVVSRMVGEEDIYVHCVSR 719
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 168/329 (51%), Gaps = 21/329 (6%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRL 66
F++M + D W M+ G G +A + RM V ++ +I A L
Sbjct: 87 FDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSL 146
Query: 67 DEALELFERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
+E ++ + + D+ N++++ + + G AEK+F E+P++D+++W SM++GY
Sbjct: 147 EEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGY 206
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE- 181
G +L +F +M G KP+ + ++ LGACS + S G++IH ++ +
Sbjct: 207 LALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ V++++++MYSK GE+ A +IF +G++ QR++++WN MI YA +G +A F K
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIF-NGMI-QRNIVAWNVMIGCYARNGRVTDAFLCFQK 323
Query: 242 MQEL-GFQANDVTYVELLTACS-HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGR 299
M E G Q + +T + LL A + G G L + ++ L+D+ G
Sbjct: 324 MSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETA------LIDMYGE 377
Query: 300 AGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
G+LK A I + + K +S W ++A
Sbjct: 378 CGQLKSAEVIFDRMAEKNVIS-WNSIIAA 405
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 61/372 (16%)
Query: 88 LTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPN 147
L GF + + A +LF E+ + D W M+ G+ GL EA++ +++M G+K +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKAD 129
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD 207
T+ V+ + +G++SL EG++IH ++ K GF + V ++LI++Y K G A K+F+
Sbjct: 130 TFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFE 189
Query: 208 DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH---- 263
+ + +RD++SWN MI+ Y G G ++ LF +M + GF+ + + + L ACSH
Sbjct: 190 E--MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 264 -----------------------AGLVDEGIQY----FDKLLKNRSIQVKEDHYACLVDL 296
++D +Y + + + N IQ + ++
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 297 CGRAGRLKEAFYIIEGLG----------VKLSLSVWGPLLAGCNVHGNADIGKLVAKKIL 346
R GR+ +AF + + ++L +L G +HG A + +L
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVL 367
Query: 347 KVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGD 406
+ + L +MY G+ K A + +M +K + SW + + +V
Sbjct: 368 E---------TALIDMYGECGQLKSAEVIFDRMAEKNV-----ISW---NSIIAAYVQNG 410
Query: 407 KSHSQSEMLEYL 418
K++S E+ + L
Sbjct: 411 KNYSALELFQEL 422
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/417 (33%), Positives = 251/417 (60%), Gaps = 14/417 (3%)
Query: 10 AFNQMQER-DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVV-----SWNAMITGYAQ- 62
F+++++ +V W T++ G A+ G A +L+ M + +V ++ +I
Sbjct: 75 VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM 134
Query: 63 -NRRLDEALE--LFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
+ RL E + + + N++L + G++ A K+F ++P+KD++ W S++
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 194
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
G+A++G EEAL ++T+M + G +KP+ T V++L AC+ + +LT G+++H + K G
Sbjct: 195 NGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 253
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
N + L+++Y++CG + A+ +FD+ + ++ +SW +I A +G+G EAI LF
Sbjct: 254 TRNLHSSNVLLDLYARCGRVEEAKTLFDE--MVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 240 NKMQEL-GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCG 298
M+ G ++T+V +L ACSH G+V EG +YF ++ + I+ + +H+ C+VDL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 299 RAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSL 358
RAG++K+A+ I+ + ++ ++ +W LL C VHG++D+ + +IL++E ++G Y L
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 359 LSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEML 415
LSNMYAS +W + +R +M G+KK PG S +EVGN V F++GDKSH QS+ +
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 140/250 (56%), Gaps = 11/250 (4%)
Query: 88 LTGFFQNGELNRAEKLFAELPQK-DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
L ++ A K+F+++ + +V W +++ GYA+ G S A ++ +M+ +G ++P
Sbjct: 60 LVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEP 119
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
+ T+ ++ A + +A + G+ IH ++ ++GF V ++L+++Y+ CG++ A K+F
Sbjct: 120 DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVF 179
Query: 207 DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGL 266
D + ++DL++WN +I +A +G EA+ L+ +M G + + T V LL+AC+ G
Sbjct: 180 DK--MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 237
Query: 267 VDEGIQ---YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWG 323
+ G + Y K+ R++ L+DL R GR++EA + + + K S+S W
Sbjct: 238 LTLGKRVHVYMIKVGLTRNLHSSN----VLLDLYARCGRVEEAKTLFDEMVDKNSVS-WT 292
Query: 324 PLLAGCNVHG 333
L+ G V+G
Sbjct: 293 SLIVGLAVNG 302
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 268 bits (685), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 147/449 (32%), Positives = 247/449 (55%), Gaps = 45/449 (10%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP----------------------- 46
F++M +RDV SW ++ +GR +DA +F RM
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 47 --------LRNVVS--------WNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTG 90
R VV+ NA++ + + LD+A +F+ M ++++ W +M+ G
Sbjct: 163 NLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFG 222
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ G ++ A LF P KDV+ WT+MM GY Q +EAL++F MQ G++P+N
Sbjct: 223 YVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ-TAGIRPDNFV 281
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
V++L C+ +L +G+ IH I++ + V +AL++MY+KCG + A ++F +
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYE-- 339
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
+++RD SW +I A +G A++L+ +M+ +G + + +T+V +LTAC+H G V EG
Sbjct: 340 IKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEG 399
Query: 271 IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIE---GLGVKLSLSVWGPLLA 327
+ F + + ++Q K +H +CL+DL RAG L EA +I+ G + + V+ LL+
Sbjct: 400 RKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLS 459
Query: 328 GCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQ 387
+GN I + VA+K+ KVE ++ ++LL+++YAS +W++ NVR KMKD G++K
Sbjct: 460 AARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKF 519
Query: 388 PGCSWIEVGNTVQVFVVGDKSHSQSEMLE 416
PGCS IE+ F+VGD S +M E
Sbjct: 520 PGCSSIEIDGVGHEFIVGDDLLSHPKMDE 548
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 142/285 (49%), Gaps = 32/285 (11%)
Query: 78 ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTK 137
E D N+++ + G++ K+F E+PQ+DV++W +++ Y +G E+A+ +F +
Sbjct: 78 EFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKR 137
Query: 138 MQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCG 197
M LK + GT V+ L ACS L +L G++I++ + T F+ + R+ +AL++M+ KCG
Sbjct: 138 MSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCG 196
Query: 198 ELHIARKIFDD-------------------------GLLRQR----DLISWNGMIAAYAH 228
L AR +FD +L +R D++ W M+ Y
Sbjct: 197 CLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQ 256
Query: 229 HGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED 288
+EA+ LF MQ G + ++ V LLT C+ G +++G + +NR + V +
Sbjct: 257 FNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENR-VTVDKV 315
Query: 289 HYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
LVD+ + G ++ A + + + + S W L+ G ++G
Sbjct: 316 VGTALVDMYAKCGCIETALEVFYEIKERDTAS-WTSLIYGLAMNG 359
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 143/280 (51%), Gaps = 10/280 (3%)
Query: 107 LPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTE 166
L ++ + M+ A + L +F +++ G L P+N T VL + L + E
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQG-LYPDNFTLPVVLKSIGRLRKVIE 64
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAY 226
G+++H K G + ++ V ++L+ MY+ G++ I K+FD+ + QRD++SWNG+I++Y
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDE--MPQRDVVSWNGLISSY 122
Query: 227 AHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
+G +AI +F +M QE + ++ T V L+ACS ++ G + + ++ + V
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSV 182
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
+ + LVD+ + G L +A + + + K ++ W ++ G G D +++ +
Sbjct: 183 RIGN--ALVDMFCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRIDEARVLFE-- 237
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
+ ++ ++ + N Y ++ EA + M+ G++
Sbjct: 238 -RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 267 bits (683), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 216/332 (65%), Gaps = 4/332 (1%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N++L + G++ A K+F ++P+KD++ W S++ G+A++G EEAL ++T+M + G +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG-I 85
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
KP+ T V++L AC+ + +LT G+++H + K G N + L+++Y++CG + A+
Sbjct: 86 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKT 145
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL-GFQANDVTYVELLTACSH 263
+FD+ + ++ +SW +I A +G+G EAI LF M+ G ++T+V +L ACSH
Sbjct: 146 LFDE--MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWG 323
G+V EG +YF ++ + I+ + +H+ C+VDL RAG++K+A+ I+ + ++ ++ +W
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 263
Query: 324 PLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 383
LL C VHG++D+ + +IL++E ++G Y LLSNMYAS +W + +R +M G
Sbjct: 264 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 323
Query: 384 LKKQPGCSWIEVGNTVQVFVVGDKSHSQSEML 415
+KK PG S +EVGN V F++GDKSH QS+ +
Sbjct: 324 VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 355
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 126/261 (48%), Gaps = 43/261 (16%)
Query: 30 AKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------PE----- 78
A G + A +FD+MP +++V+WN++I G+A+N + +EAL L+ M P+
Sbjct: 34 ANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIV 93
Query: 79 ----------------------------RDMASWNAMLTGFFQNGELNRAEKLFAELPQK 110
R++ S N +L + + G + A+ LF E+ K
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 153
Query: 111 DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEG-QQ 169
+ ++WTS++ G A +G +EA+++F M++ GL P TFV +L ACS + EG +
Sbjct: 154 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEY 213
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
++ + + ++++ ++ G++ A + + + Q +++ W ++ A H
Sbjct: 214 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE-YIKSMPMQPNVVIWRTLLGACTVH 272
Query: 230 GYGNEAINLFNKMQELGFQAN 250
G+ + F ++Q L + N
Sbjct: 273 --GDSDLAEFARIQILQLEPN 291
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 99/176 (56%), Gaps = 10/176 (5%)
Query: 161 LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWN 220
+A + G+ IH ++ ++GF V ++L+++Y+ CG++ A K+FD + ++DL++WN
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK--MPEKDLVAWN 58
Query: 221 GMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ---YFDKL 277
+I +A +G EA+ L+ +M G + + T V LL+AC+ G + G + Y K+
Sbjct: 59 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 278 LKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
R++ L+DL R GR++EA + + + K S+S W L+ G V+G
Sbjct: 119 GLTRNLHSSN----VLLDLYARCGRVEEAKTLFDEMVDKNSVS-WTSLIVGLAVNG 169
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 245/417 (58%), Gaps = 18/417 (4%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELF-- 73
E D+ +T++D AK G I DA+ +FD ++++ WN ++ YA++ EAL LF
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 74 ---ERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQHG 126
E +P ++ +WN ++ +NG+++ A+ +F ++ ++I+WT+MM G Q+G
Sbjct: 467 MQLEGVPP-NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 127 LSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV 186
SEEA+ KMQ GL+PN + L AC+ LASL G+ IH I + Q ++ V
Sbjct: 526 CSEEAILFLRKMQ-ESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN-LQHSSLVS 583
Query: 187 --SALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE 244
++L++MY+KCG+++ A K+F L + L N MI+AYA +G EAI L+ ++
Sbjct: 584 IETSLVDMYAKCGDINKAEKVFGSKLYSELPL--SNAMISAYALYGNLKEAIALYRSLEG 641
Query: 245 LGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLK 304
+G + +++T +L+AC+HAG +++ I+ F ++ RS++ +HY +VDL AG +
Sbjct: 642 VGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETE 701
Query: 305 EAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYA 364
+A +IE + K + L+A CN ++ +++K+L+ E EN+G Y +SN YA
Sbjct: 702 KALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYA 761
Query: 365 SVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNT--VQVFVVGDKSHSQSEMLEYLL 419
G W E +R MK KGLKK+PGCSWI++ V VFV DK+H++ ++ +L
Sbjct: 762 VEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 145/291 (49%), Gaps = 42/291 (14%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------ 76
+++ D K G +DDA +FD +P RN V+WNA++ GY QN + +EA+ LF M
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Query: 77 PERDMASW---------------------------------NAMLTGFFQNGELNRAEKL 103
P R S ++L + + G + AE +
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMV 331
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F + +KDV+TW +++GY Q GL E+A+ M M+ LK + T T++ A + +
Sbjct: 332 FDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE-KLKYDCVTLATLMSAAARTEN 390
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
L G+++ + F+ + + S +++MY+KCG + A+K+FD + ++DLI WN ++
Sbjct: 391 LKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTV--EKDLILWNTLL 448
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
AAYA G EA+ LF MQ G N +T+ ++ + G VDE F
Sbjct: 449 AAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 13/270 (4%)
Query: 13 QMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVS----WNAMITGYAQNRRLDE 68
Q +S+ V L K+G I +A +L M RN+ + ++ G R L
Sbjct: 29 QAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLST 88
Query: 69 ALELFERMPE------RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
++ R+ + R+ ++ + + L AE LF++L ++V +W +++
Sbjct: 89 GKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVK 148
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
+ GL E AL F +M N + P+N V AC L G+ +H + K+G ++
Sbjct: 149 CRIGLCEGALMGFVEMLENE-IFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
V S+L +MY KCG L A K+FD+ + R+ ++WN ++ Y +G EAI LF+ M
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDE--IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQ 272
++ G + VT L+A ++ G V+EG Q
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 217/361 (60%), Gaps = 3/361 (0%)
Query: 56 MITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITW 115
+I+ YA+ LD ++F +P D AM+T + G++ A KLF +P++D I W
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
+M++GYAQ G S EAL +F MQ G +K N ++VL AC+ L +L +G+ H I
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEG-VKVNGVAMISVLSACTQLGALDQGRWAHSYIE 267
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEA 235
+ + R+ + L+++Y+KCG++ A ++F + ++++ +W+ + A +G+G +
Sbjct: 268 RNKIKITVRLATTLVDLYAKCGDMEKAMEVFWG--MEEKNVYTWSSALNGLAMNGFGEKC 325
Query: 236 INLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVD 295
+ LF+ M++ G N VT+V +L CS G VDEG ++FD + I+ + +HY CLVD
Sbjct: 326 LELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVD 385
Query: 296 LCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGT 355
L RAGRL++A II+ + +K +VW LL ++ N ++G L +KK+L++E N G
Sbjct: 386 LYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGA 445
Query: 356 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEML 415
Y LLSN+YA W ++VR MK KG++KQPGCS +EV V F VGDKSH + +
Sbjct: 446 YVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQI 505
Query: 416 E 416
+
Sbjct: 506 D 506
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 47/276 (17%)
Query: 92 FQNGELNRAEK--LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGG-LKPNN 148
+ N L+R+EK LFA SM+ + + + E++ + ++ ++G LKP+N
Sbjct: 58 YANQILDRSEKPTLFA---------LNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDN 108
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMY--------------- 193
T ++ AC+GL G Q+H + + GF + V + LI++Y
Sbjct: 109 YTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNS 168
Query: 194 ----------------SKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
++CG++ ARK+F+ + +RD I+WN MI+ YA G EA+N
Sbjct: 169 IPCPDFVCRTAMVTACARCGDVVFARKLFEG--MPERDPIAWNAMISGYAQVGESREALN 226
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
+F+ MQ G + N V + +L+AC+ G +D+G ++ ++ I++ LVDL
Sbjct: 227 VFHLMQLEGVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLY 285
Query: 298 GRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ G +++A + G+ K ++ W L G ++G
Sbjct: 286 AKCGDMEKAMEVFWGMEEK-NVYTWSSALNGLAMNG 320
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 47/293 (16%)
Query: 7 CTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRL 66
C FN + D T MV A+ G + AR LF+ MP R+ ++WNAMI+GYAQ
Sbjct: 162 CHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGES 221
Query: 67 DEALELFERMP----------------------ERDMASW-----------------NAM 87
EAL +F M D W +
Sbjct: 222 REALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTL 281
Query: 88 LTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPN 147
+ + + G++ +A ++F + +K+V TW+S + G A +G E+ L++F+ M+ + G+ PN
Sbjct: 282 VDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQD-GVTPN 340
Query: 148 NGTFVTVLGACSGLASLTEGQQ-IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
TFV+VL CS + + EGQ+ + ++ G + L+++Y++ G L A I
Sbjct: 341 AVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSII 400
Query: 207 DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF--NKMQELGFQANDVTYVEL 257
++ + W+ ++ +A Y N + + KM EL AN YV L
Sbjct: 401 QQMPMKPHAAV-WSSLL--HASRMYKNLELGVLASKKMLELE-TANHGAYVLL 449
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 265 bits (677), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 243/454 (53%), Gaps = 46/454 (10%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM----PE 78
T ++ + G +D AR +FD+ R + WNA+ +E L L+ +M E
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 79 RDMASWNAMLTG---------------------------------------FFQNGELNR 99
D ++ +L + + G ++
Sbjct: 176 SDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDY 235
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM-QANGGLKPNNGTFVTVLGAC 158
A +F +P ++V++W++M+ YA++G + EAL+ F +M + PN+ T V+VL AC
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ LA+L +G+ IH I + G V+SAL+ MY +CG+L + +++FD + RD++S
Sbjct: 296 ASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR--MHDRDVVS 353
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
WN +I++Y HGYG +AI +F +M G VT+V +L ACSH GLV+EG + F+ +
Sbjct: 354 WNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMW 413
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
++ I+ + +HYAC+VDL GRA RL EA +++ + + VWG LL C +HGN ++
Sbjct: 414 RDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Query: 339 KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNT 398
+ ++++ +E +NAG Y LL+++YA W E V+ ++ +GL+K PG W+EV
Sbjct: 474 ERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRK 533
Query: 399 VQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDI 432
+ FV D+ + E + L+ L MK+ G I
Sbjct: 534 MYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYI 567
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 154/319 (48%), Gaps = 15/319 (4%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER--DMA 82
++ L K G++ A + + + ++ +I L +AL + + + D
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQD 111
Query: 83 SWNAM-LTGFFQN-GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQA 140
+ A L G + + G ++ A K+F + ++ + W ++ G EE L ++ KM
Sbjct: 112 PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMN- 170
Query: 141 NGGLKPNNGTFVTVLGACSG----LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKC 196
G++ + T+ VL AC + L +G++IH +++ G+ + +++ L++MY++
Sbjct: 171 RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARF 230
Query: 197 GELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM--QELGFQANDVTY 254
G + A +F G + R+++SW+ MIA YA +G EA+ F +M + N VT
Sbjct: 231 GCVDYASYVF--GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTM 288
Query: 255 VELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLG 314
V +L AC+ +++G +L+ R + + LV + GR G+L+ + + +
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILR-RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH 347
Query: 315 VKLSLSVWGPLLAGCNVHG 333
+ +S W L++ VHG
Sbjct: 348 DRDVVS-WNSLISSYGVHG 365
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 23/232 (9%)
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
I+ ++ + G ++A+++ ++ + P+ T+ ++ C +SL++ ++H+
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESS-----PSQQTYELLILCCGHRSSLSDALRVHR 101
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
I G ++ + + LI MYS G + ARK+FD R+R + WN + A G+G
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDK--TRKRTIYVWNALFRALTLAGHG 159
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVK------ 286
E + L+ KM +G +++ TY +L AC + + L+K + I
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT------VNHLMKGKEIHAHLTRRGY 213
Query: 287 EDHY---ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
H LVD+ R G + A Y+ G+ V+ +S W ++A +G A
Sbjct: 214 SSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS-WSAMIACYAKNGKA 264
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 265 bits (676), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 245/462 (53%), Gaps = 49/462 (10%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F QM +D ++W +MV G + G++DDA LF +MP +NV+SW MI G QN R EAL
Sbjct: 151 FYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEAL 210
Query: 71 ELFERM----------------------PERDMA----------------SWNAMLTGFF 92
+LF+ M P M +A L F+
Sbjct: 211 DLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFY 270
Query: 93 QNGE-LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
N + + + K+F E + V WT++++GY+ + E+AL +F+ M N L PN TF
Sbjct: 271 ANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL-PNQSTF 329
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL 211
+ L +CS L +L G+++H + K G + + V ++L+ MYS G ++ A +F +
Sbjct: 330 ASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK--I 387
Query: 212 RQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGI 271
++ ++SWN +I A HG G A +F +M L + +++T+ LL+ACSH G +++G
Sbjct: 388 FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGR 447
Query: 272 QYFDKLLKN-RSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCN 330
+ F + I K HY C+VD+ GR G+LKEA +IE + VK + VW LL+ C
Sbjct: 448 KLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACR 507
Query: 331 VHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 390
+H + D G+ A I ++ +++ Y LLSN+YAS G+W + +R+KMK G+ K+PG
Sbjct: 508 MHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGS 567
Query: 391 SWIEVGNTVQVFVVGDKSHSQS--EMLEYLLLGLHTKMKKFG 430
SW+ + F GD+ H E LE+ L K+K+ G
Sbjct: 568 SWVVIRGKKHEFFSGDQPHCSRIYEKLEF----LREKLKELG 605
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 190/374 (50%), Gaps = 38/374 (10%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
FNQ+ VS +T M+ G +S R+ DA LFD MP+R+VVSWN+MI+G + ++ A
Sbjct: 57 VFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTA 116
Query: 70 LELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSE 129
++LF+ MPER + SW AM+ G F++G++++AE+LF ++P KD W SM+ GY Q G +
Sbjct: 117 VKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVD 176
Query: 130 EALKMFTKMQANG------------------------------GLKPNNGTFVTVLGACS 159
+ALK+F +M +K + F V+ AC+
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 160 GLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISW 219
+ G Q+H LI K GF V ++LI Y+ C + +RK+FD+ + Q + W
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ--VAVW 294
Query: 220 NGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
+++ Y+ + +A+++F+ M N T+ L +CS G +D G + +K
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK 354
Query: 280 NRSIQVKEDHYA--CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADI 337
+ ++ D + LV + +G + +A + + K S+ W ++ GC HG
Sbjct: 355 ---LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKW 410
Query: 338 GKLVAKKILKVEHE 351
++ +++++ E
Sbjct: 411 AFVIFGQMIRLNKE 424
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 138/278 (49%), Gaps = 21/278 (7%)
Query: 55 AMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVIT 114
+I + +RR+DEA E+F ++P ++ + M+TG+ ++ L A LF E+P +DV++
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQI-HQL 173
W SM++G + G A+K+F +M + ++ ++ C + + +++ +Q+
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEMPERSVV-----SWTAMVNGCFRSGKVDQAERLFYQM 154
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
K +T +++++ Y + G++ A K+F + +++ISW MI +
Sbjct: 155 PVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQ--MPGKNVISWTTMICGLDQNERSG 207
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
EA++LF M ++ + ++TAC++A GIQ ++K +E A L
Sbjct: 208 EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIK-LGFLYEEYVSASL 266
Query: 294 VDL---CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ C R G ++ F V ++VW LL+G
Sbjct: 267 ITFYANCKRIGDSRKVF----DEKVHEQVAVWTALLSG 300
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 265 bits (676), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/446 (33%), Positives = 247/446 (55%), Gaps = 46/446 (10%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQ---NRRLDEALELFERMPER- 79
+++D AK + DAR +FD +VV +NAMI GY++ L EAL +F M R
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 80 --------------------------------------DMASWNAMLTGFFQNGELNRAE 101
D+ + +A++ + L +
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSR 509
Query: 102 KLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGL 161
+F E+ KD++ W SM GY Q +EEAL +F ++Q + +P+ TF ++ A L
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEFTFANMVTAAGNL 568
Query: 162 ASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
AS+ GQ+ H + K G + N + +AL++MY+KCG A K FD RD++ WN
Sbjct: 569 ASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA--ASRDVVCWNS 626
Query: 222 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNR 281
+I++YA+HG G +A+ + KM G + N +T+V +L+ACSHAGLV++G++ F+ +L+
Sbjct: 627 VISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-F 685
Query: 282 SIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLV 341
I+ + +HY C+V L GRAGRL +A +IE + K + VW LL+GC GN ++ +
Sbjct: 686 GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHA 745
Query: 342 AKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQV 401
A+ + + +++G++++LSN+YAS G W EA VR +MK +G+ K+PG SWI + V +
Sbjct: 746 AEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHI 805
Query: 402 FVVGDKSHSQSEMLEYLLLGLHTKMK 427
F+ DKSH ++ + +L L +++
Sbjct: 806 FLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 177/356 (49%), Gaps = 49/356 (13%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
+RDV T ++D K G ID AR +FD +P ++ V+W MI+G + R +L+LF +
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 76 M----------------------P-----------------ERDMASWNAMLTGFFQNGE 96
+ P E D + N ++ + + G
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
+ A KLF +P K++I+WT++++GY Q+ L +EA+++FT M + GLKP+ ++L
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILT 358
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
+C+ L +L G Q+H K ++ V ++LI+MY+KC L ARK+FD + D+
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD--IFAAADV 416
Query: 217 ISWNGMIAAYAHHGYG---NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGI-Q 272
+ +N MI Y+ G +EA+N+F M+ + + +T+V LL A A L G+ +
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGLSK 474
Query: 273 YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
L+ + + + L+D+ LK++ + + + VK L +W + AG
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 143/299 (47%), Gaps = 45/299 (15%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
E D +++ +++G + AR +F++MP RN+VSW+ M++ + +E+L +F
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 76 M-------P-----------------------------------ERDMASWNAMLTGFFQ 93
P +RD+ ++ + +
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 94 NGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVT 153
+G ++ A +F LP+K +TWT+M++G + G S +L++F ++ + + P+ T
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED-NVVPDGYILST 254
Query: 154 VLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ 213
VL ACS L L G+QIH I + G + + +++ LI+ Y KCG + A K+F+ +
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG--MPN 312
Query: 214 RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ 272
+++ISW +++ Y + EA+ LF M + G + + +LT+C+ + G Q
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 125/257 (48%), Gaps = 14/257 (5%)
Query: 78 ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTK 137
E D N ++ + + G + A K+F ++P++++++W++M++ HG+ EE+L +F +
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 138 MQANGGLKPNNGTFVTVLGACSGLASLTEGQ------QIHQLISKTGFQENTRVVSALIN 191
PN + + ACSGL +G+ Q+ + K+GF + V + LI+
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGL----DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLID 191
Query: 192 MYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAND 251
Y K G + AR +FD L ++ ++W MI+ G ++ LF ++ E +
Sbjct: 192 FYLKDGNIDYARLVFDA--LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDG 249
Query: 252 VTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIE 311
+L+ACS ++ G Q +L+ +++ L+D + GR+ A +
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 312 GLGVKLSLSVWGPLLAG 328
G+ K +S W LL+G
Sbjct: 309 GMPNKNIIS-WTTLLSG 324
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 248/432 (57%), Gaps = 45/432 (10%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------ 76
+ +VD K ++ AR +F +MP +++V+WN+MI GY +E+ RM
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 77 PER---------------------------------DMASWNAMLTGFFQNGELNRAEKL 103
P + D+ +++ +F+ GE N AE +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 104 FAELPQKDVI-TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
F++ QKDV +W M++ Y G +A++++ +M + G+KP+ TF +VL ACS LA
Sbjct: 367 FSK-TQKDVAESWNVMISSYISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQLA 424
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
+L +G+QIH IS++ + + ++SAL++MYSKCG A +IF+ + ++D++SW M
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNS--IPKKDVVSWTVM 482
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
I+AY HG EA+ F++MQ+ G + + VT + +L+AC HAGL+DEG+++F ++
Sbjct: 483 ISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYG 542
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGLG-VKLSLSVWGPLLAGCNVHGNADIGKLV 341
I+ +HY+C++D+ GRAGRL EA+ II+ + + L + C +H +G +
Sbjct: 543 IEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRI 602
Query: 342 AKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQV 401
A+ +++ ++A TY +L N+YAS W A VR+KMK+ GL+K+PGCSWIE+ + V
Sbjct: 603 ARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCH 662
Query: 402 FVVGDKSHSQSE 413
F D+SH ++E
Sbjct: 663 FFAEDRSHLRAE 674
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 173/335 (51%), Gaps = 15/335 (4%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRR 65
F++M ERDV+SW T++ +SG + A LF RM N VS I+ ++
Sbjct: 164 VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLW 223
Query: 66 LDEALELFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
L+ E+ + E D +A++ + + L A ++F ++P+K ++ W SM+ G
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
Y G S+ +++ +M G +P+ T ++L ACS +L G+ IH + ++
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGT-RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI-SWNGMIAAYAHHGYGNEAINLFN 240
+ V +LI++Y KCGE ++A +F Q+D+ SWN MI++Y G +A+ +++
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKT---QKDVAESWNVMISSYISVGNWFKAVEVYD 399
Query: 241 KMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRA 300
+M +G + + VT+ +L ACS +++G Q + ++R ++ E + L+D+ +
Sbjct: 400 QMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR-LETDELLLSALLDMYSKC 458
Query: 301 GRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
G KEAF I + K +S W +++ HG
Sbjct: 459 GNEKEAFRIFNSIPKKDVVS-WTVMISAYGSHGQP 492
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 178/398 (44%), Gaps = 93/398 (23%)
Query: 49 NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP 108
+VV ++++ YA+ + +L++F+ MPERD+ASWN +++ F+Q+GE
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE------------ 188
Query: 109 QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
+E+AL++F +M+++ G +PN+ + + ACS L L G+
Sbjct: 189 -------------------AEKALELFGRMESS-GFEPNSVSLTVAISACSRLLWLERGK 228
Query: 169 QIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAH 228
+IH+ K GF+ + V SAL++MY KC L +AR++F + ++ L++WN MI Y
Sbjct: 229 EIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQK--MPRKSLVAWNSMIKGYVA 286
Query: 229 HGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED 288
G + + N+M G + + T +L ACS + + G ++ RS+ +
Sbjct: 287 KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI--RSVVNADI 344
Query: 289 HYAC-LVDL---CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKK 344
+ C L+DL CG A + F
Sbjct: 345 YVNCSLIDLYFKCGEANLAETVFS------------------------------------ 368
Query: 345 ILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQ--------PGCSW---I 393
K + + A +++++ + Y SVG W +A V +M G+K P CS +
Sbjct: 369 --KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 394 EVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGD 431
E G + + + S S+ E E LL L K G+
Sbjct: 427 EKGKQIHLSI----SESRLETDELLLSALLDMYSKCGN 460
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 134/258 (51%), Gaps = 5/258 (1%)
Query: 79 RDMASWNAMLTGFFQNGELNRAEKLFAELP-QKDVITWTSMMTGYAQHGLSEEALKMFTK 137
RD+ +++ +F + A +F + DV W S+M+GY+++ + + L++F +
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 138 MQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCG 197
+ P++ TF V+ A L G+ IH L+ K+G+ + V S+L+ MY+K
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 198 ELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
+ ++FD+ + +RD+ SWN +I+ + G +A+ LF +M+ GF+ N V+
Sbjct: 157 LFENSLQVFDE--MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVA 214
Query: 258 LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKL 317
++ACS ++ G + K +K + ++ E + LVD+ G+ L+ A + + + K
Sbjct: 215 ISACSRLLWLERGKEIHRKCVK-KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK- 272
Query: 318 SLSVWGPLLAGCNVHGNA 335
SL W ++ G G++
Sbjct: 273 SLVAWNSMIKGYVAKGDS 290
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 246/451 (54%), Gaps = 43/451 (9%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
+ DV +++++ K G++D+A LF +M R+V+ W M+TG+AQ + +A+E +
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYRE 207
Query: 76 MPERDMASWNAMLTGFFQ--------------NGELNR---------------------- 99
M ++ G Q +G L R
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGF 267
Query: 100 ---AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
A ++F+ + K ++W S+++G+AQ+GL+ +A + +MQ+ G +P+ T V VL
Sbjct: 268 IEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLG-FQPDLVTLVGVLV 326
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
ACS + SL G+ +H I K + +AL++MYSKCG L +R+IF+ + ++DL
Sbjct: 327 ACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEH--VGRKDL 383
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+ WN MI+ Y HG G E ++LF KM E + + T+ LL+A SH+GLV++G +F
Sbjct: 384 VCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSV 443
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
++ IQ E HY CL+DL RAGR++EA +I + +L +W LL+GC H N
Sbjct: 444 MINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLS 503
Query: 337 IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVG 396
+G + A KIL++ ++ G +L+SN +A+ KWKE A VR M++ ++K PG S IEV
Sbjct: 504 VGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVN 563
Query: 397 NTVQVFVVGDKSHSQSEMLEYLLLGLHTKMK 427
++ F++ D SH + + +L L T+++
Sbjct: 564 GELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 189/386 (48%), Gaps = 56/386 (14%)
Query: 27 DGLAKSGRIDD---ARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------P 77
D +A GRI + AR +FD +P R V +N+MI Y++ + DE L L+++M P
Sbjct: 55 DLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQP 114
Query: 78 ------------------ERDMASW---------------NAMLTGFFQNGELNRAEKLF 104
E+ A W +++L + + G+++ AE LF
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 105 AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
++ ++DVI WT+M+TG+AQ G S +A++ + +MQ N G + + +L A L
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ-NEGFGRDRVVMLGLLQASGDLGDT 233
Query: 165 TEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIA 224
G+ +H + +TG N V ++L++MY+K G + +A ++F + + +SW +I+
Sbjct: 234 KMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTA--VSWGSLIS 291
Query: 225 AYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQ 284
+A +G N+A +MQ LGFQ + VT V +L ACS G + G +LK +
Sbjct: 292 GFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD 351
Query: 285 VKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKK 344
L+D+ + G L + I E +G K L W +++ +HGN G+ V
Sbjct: 352 --RVTATALMDMYSKCGALSSSREIFEHVGRK-DLVCWNTMISCYGIHGN---GQEVVSL 405
Query: 345 ILK-----VEHENAGTYSLLSNMYAS 365
LK +E ++A SLLS + S
Sbjct: 406 FLKMTESNIEPDHATFASLLSALSHS 431
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 169 QIHQLISKTGFQENTRVVSA-LINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
QIH + TG N +S LI + GE+ ARK+FD+ L QR + +N MI Y+
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDE--LPQRGVSVYNSMIVVYS 92
Query: 228 HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKE 287
+E + L+++M Q + T+ + AC ++++G + K + K
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV---DFGYKN 149
Query: 288 DHYAC--LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
D + C +++L + G++ EA ++ G K + W ++ G
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEA-EVLFGKMAKRDVICWTTMVTG 191
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 226/349 (64%), Gaps = 7/349 (2%)
Query: 86 AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
A++T + + G++ A ++F +P+K ++ W S+++G+ Q+GL++EA+++F +M+ G +
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR-ESGFE 205
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKI 205
P++ TFV++L AC+ +++ G +HQ I G N ++ +ALIN+YS+CG++ AR++
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 206 FDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE-LGFQANDVTYVELLTACSHA 264
FD +++ ++ +W MI+AY HGYG +A+ LFNKM++ G N+VT+V +L+AC+HA
Sbjct: 266 FDK--MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHA 323
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLSLSV 321
GLV+EG + ++ K+ + +H+ C+VD+ GRAG L EA+ I L G + ++
Sbjct: 324 GLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPAL 383
Query: 322 WGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKD 381
W +L C +H N D+G +AK+++ +E +N G + +LSN+YA GK E +++R M
Sbjct: 384 WTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMR 443
Query: 382 KGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFG 430
L+KQ G S IEV N +F +GD+SH ++ + L L ++ K+ G
Sbjct: 444 NNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIG 492
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 130/234 (55%), Gaps = 11/234 (4%)
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
LF +P D + S++ ++ L + + +M ++ + P+N TF +V+ +C+ L+
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSN-VSPSNYTFTSVIKSCADLS 121
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
+L G+ +H +GF +T V +AL+ YSKCG++ AR++FD + ++ +++WN +
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDR--MPEKSIVAWNSL 179
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
++ + +G +EAI +F +M+E GF+ + T+V LL+AC+ G V G + + + +
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLG-SWVHQYIISEG 238
Query: 283 IQVKEDHYACLVDL---CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ + L++L CG G+ +E F ++ + +++ W +++ HG
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMK----ETNVAAWTAMISAYGTHG 288
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 152/338 (44%), Gaps = 79/338 (23%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D +V +K G ++ AR +FDRMP +++V+WN++++G+ QN DEA+++F +M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 78 ER----------------------DMASW-----------------NAMLTGFFQNGELN 98
E + SW A++ + + G++
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
+A ++F ++ + +V WT+M++ Y HG ++A+++F KM+ + G PNN TFV VL AC
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ + EG+ +++ ++K+ R++ + E H+
Sbjct: 321 AHAGLVEEGRSVYKRMTKS-----YRLIPGV--------EHHVC---------------- 351
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
M+ G+ +EA +++ G + +L AC D G++ +
Sbjct: 352 ---MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVE-----I 403
Query: 279 KNRSIQVKED---HYACLVDLCGRAGRLKEAFYIIEGL 313
R I ++ D H+ L ++ +G+ E +I +G+
Sbjct: 404 AKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 441
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/394 (33%), Positives = 229/394 (58%), Gaps = 7/394 (1%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELFERMPER 79
++VD AK+G++ A +F+ P R +++ WN +I GY + + + A LF MPER
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
+ SW+ ++ G+ +GELNRA++LF +P+K+V++WT+++ G++Q G E A+ + +M
Sbjct: 226 NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM- 284
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
GLKPN T VL ACS +L G +IH I G + + + +AL++MY+KCGEL
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
A +F + + +D++SW MI +A HG ++AI F +M G + ++V ++ +LT
Sbjct: 345 DCAATVFSN--MNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLT 402
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSL 319
AC ++ VD G+ +FD + + +I+ HY +VDL GRAG+L EA ++E + + L
Sbjct: 403 ACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDL 462
Query: 320 SVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKM 379
+ W L C H + V++ +L+++ E G+Y L +AS G ++ R+ +
Sbjct: 463 TTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSL 522
Query: 380 KDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSE 413
+ + ++ G S+IE+ + F GD SH ++
Sbjct: 523 QKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQ 556
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 43/265 (16%)
Query: 8 TMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLD 67
T F M ER+ SW+T++ G SG ++ A+ LF+ MP +NVVSW +I G++Q +
Sbjct: 216 TTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYE 275
Query: 68 EALELFERMPER---------------------------------------DMASWNAML 88
A+ + M E+ D A A++
Sbjct: 276 TAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALV 335
Query: 89 TGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
+ + GEL+ A +F+ + KD+++WT+M+ G+A HG +A++ F +M +G KP+
Sbjct: 336 DMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE-KPDE 394
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLIS-KTGFQENTRVVSALINMYSKCGELHIARKIFD 207
F+ VL AC + + G + + + ++++ + G+L+ A ++ +
Sbjct: 395 VVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVE 454
Query: 208 DGLLRQRDLISWNGMI-AAYAHHGY 231
+ + DL +W + A AH GY
Sbjct: 455 NMPINP-DLTTWAALYRACKAHKGY 478
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 67/295 (22%)
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
+F +++ +++ G ++ E +++ F M G+KP+ TF VL + S L
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILM-LRLGVKPDRLTFPFVLKSNSKLG 140
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD-------------- 208
G+ +H K ++ V +L++MY+K G+L A ++F++
Sbjct: 141 FRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 209 ----GLLRQRDLI---------------SWNGMIAAYAHHGYGNEAINLFN--------- 240
G R +D+ SW+ +I Y G N A LF
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS 260
Query: 241 ----------------------KMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
+M E G + N+ T +L+ACS +G + GI+ +L
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
N I++ LVD+ + G L A + + K LS W ++ G VHG
Sbjct: 321 DN-GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILS-WTAMIQGWAVHG 373
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/455 (32%), Positives = 249/455 (54%), Gaps = 41/455 (9%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL-----RNVVSWNAMITGYAQNRR 65
F++M ERDV SW +M+ G ++SG +D + ++ M N V+ ++ Q+
Sbjct: 190 FDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSD 249
Query: 66 LDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
L LE+ ++M E D++ NA++ + + G L+ A LF E+ +KD +T+ ++++G
Sbjct: 250 LIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISG 309
Query: 122 YAQHGLSEEALKMFTKMQANG------------------------------GLKPNNGTF 151
Y HGL +EA+ +F++M++ G G +PN T
Sbjct: 310 YMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTL 369
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL 211
++L + + ++L G++IH + G N V +++I+ Y+K G L A+++FD+
Sbjct: 370 SSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDN--C 427
Query: 212 RQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGI 271
+ R LI+W +I AYA HG + A +LF++MQ LG + +DVT +L+A +H+G D
Sbjct: 428 KDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQ 487
Query: 272 QYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNV 331
FD +L I+ +HYAC+V + RAG+L +A I + + VWG LL G +V
Sbjct: 488 HIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASV 547
Query: 332 HGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 391
G+ +I + ++ ++E EN G Y++++N+Y G+W+EA VR KMK GLKK PG S
Sbjct: 548 LGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTS 607
Query: 392 WIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKM 426
WIE ++ F+ D S +S+ + ++ GL M
Sbjct: 608 WIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESM 642
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 50/274 (18%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELF--------- 73
+ ++ + R A +FD + +RN S+NA++ Y +A LF
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 74 ---ERMPER------------------------------------DMASWNAMLTGFFQN 94
P+ D+ N M+T + +
Sbjct: 121 SSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKC 180
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
+ A K+F E+ ++DV++W SM++GY+Q G E+ KM+ M A KPN T ++V
Sbjct: 181 DNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISV 240
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
AC + L G ++H+ + + Q + + +A+I Y+KCG L AR +FD+ + ++
Sbjct: 241 FQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDE--MSEK 298
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
D +++ +I+ Y HG EA+ LF++M+ +G
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 145/299 (48%), Gaps = 25/299 (8%)
Query: 52 SWNAMITGYAQNRRLDEALELFERM------PERDMASWNAMLTGFFQNGELNRAEKLFA 105
++ +I + ++R L+L R+ P+ +AS +++ + + +A +F
Sbjct: 24 AYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLAS--KLISFYTRQDRFRQALHVFD 81
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMF-----TKMQANGGLKPNNGTFVTVLGACSG 160
E+ ++ ++ +++ Y + +A +F + ++ +P++ + VL A SG
Sbjct: 82 EITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSG 141
Query: 161 -----LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
L SL +Q+H + + GF + V + +I Y+KC + ARK+FD+ + +RD
Sbjct: 142 CDDFWLGSL--ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDE--MSERD 197
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQANDVTYVELLTACSHAGLVDEGIQYF 274
++SWN MI+ Y+ G + ++ M F+ N VT + + AC + + G++
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH 257
Query: 275 DKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
K+++N IQ+ ++ + G L A + + + K S++ +G +++G HG
Sbjct: 258 KKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVT-YGAIISGYMAHG 314
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 227/370 (61%), Gaps = 2/370 (0%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
DV T+V+ +SG + AR + DRMP+R+ VSWN++++ Y + +DEA LF+ M
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 78 ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTK 137
ER++ SWN M++G+ G + A+++F +P +DV++W +M+T YA G E L++F K
Sbjct: 234 ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNK 293
Query: 138 MQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCG 197
M + KP+ T V+VL AC+ L SL++G+ +H I K G + + +AL++MYSKCG
Sbjct: 294 MLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCG 353
Query: 198 ELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
++ A ++F +RD+ +WN +I+ + HG G +A+ +F++M GF+ N +T++ +
Sbjct: 354 KIDKALEVFR--ATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGV 411
Query: 258 LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKL 317
L+AC+H G++D+ + F+ + ++ +HY C+VDL GR G+++EA ++ +
Sbjct: 412 LSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADE 471
Query: 318 SLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRM 377
+ + LL C G + + +A ++L++ ++ Y+ +SN+YAS G+W++ + R
Sbjct: 472 ASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRR 531
Query: 378 KMKDKGLKKQ 387
M+ + + +
Sbjct: 532 NMRAERVNRS 541
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 141/279 (50%), Gaps = 43/279 (15%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M+ER+V SW M+ G A +G + +A+ +FD MP+R+VVSWNAM+T YA +E L
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 71 ELFERM-------PE----------------RDMASW-----------------NAMLTG 90
E+F +M P+ W A++
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ + G++++A ++F ++DV TW S+++ + HGL ++AL++F++M G KPN T
Sbjct: 349 YSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM-VYEGFKPNGIT 407
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENT-RVVSALINMYSKCGELHIARKIFDDG 209
F+ VL AC+ + L + +++ +++S E T ++++ + G++ A ++ ++
Sbjct: 408 FIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNE- 466
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
+ I ++ A G +A + N++ EL +
Sbjct: 467 IPADEASILLESLLGACKRFGQLEQAERIANRLLELNLR 505
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 66/283 (23%)
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
T S++ YA E AL +F +M G + P+ +F VL AC+ EG+QIH
Sbjct: 106 FTHNSVIRAYANSSTPEVALTVFREMLL-GPVFPDKYSFTFVLKACAAFCGFEEGRQIHG 164
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
L K+G + V + L+N+Y + G IARK+ D + RD +SWN +++AY G
Sbjct: 165 LFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDR--MPVRDAVSWNSLLSAYLEKGLV 222
Query: 233 NEAINLFNKMQELGFQA---------------------------NDVTYVELLTACSHAG 265
+EA LF++M+E ++ + V++ ++TA +H G
Sbjct: 223 DEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG 282
Query: 266 LVDEGIQYFDKLLKNRS-----------------------------------IQVKEDHY 290
+E ++ F+K+L + + I+++
Sbjct: 283 CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLA 342
Query: 291 ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
LVD+ + G++ +A + K +S W +++ +VHG
Sbjct: 343 TALVDMYSKCGKIDKALEVFRATS-KRDVSTWNSIISDLSVHG 384
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 16/241 (6%)
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGE---LHIARK 204
+ T V +L SLTE QQ H + KTG +T S L+ + E + A
Sbjct: 36 SSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHS 95
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
I + + + + N +I AYA+ A+ +F +M + ++ +L AC+
Sbjct: 96 ILNR--IGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAF 153
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYA--CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
+EG Q +K+ + D + LV++ GR+G + A +++ + V+ ++S W
Sbjct: 154 CGFEEGRQIHGLFIKSGLVT---DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS-W 209
Query: 323 GPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANV--RMKMK 380
LL+ G D + + ++ E N +++ + + YA+ G KEA V M ++
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEM---EERNVESWNFMISGYAAAGLVKEAKEVFDSMPVR 266
Query: 381 D 381
D
Sbjct: 267 D 267
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 218/375 (58%), Gaps = 7/375 (1%)
Query: 50 VVSWNAMITGYAQN-RRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP 108
VV A++ YA + + A +LF+ M ER++ SW AML+G+ ++G+++ A LF ++P
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP 220
Query: 109 QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
++DV +W +++ Q+GL EA+ +F +M ++PN T V VL AC+ +L +
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 169 QIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAH 228
IH + + V ++L+++Y KCG L A +F + ++ L +WN MI +A
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFK--MASKKSLTAWNSMINCFAL 338
Query: 229 HGYGNEAINLFNKMQELGF---QANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
HG EAI +F +M +L + + +T++ LL AC+H GLV +G YFD + I+
Sbjct: 339 HGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEP 398
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
+ +HY CL+DL GRAGR EA ++ + +K ++WG LL C +HG+ D+ ++ K +
Sbjct: 399 RIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNL 458
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVG 405
+ + N G ++++N+Y +G W+EA R +K + K PG S IE+ N V F
Sbjct: 459 VALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSL 518
Query: 406 DKSHSQSEMLEYLLL 420
DKSH ++E + Y++L
Sbjct: 519 DKSHPETEEI-YMIL 532
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 44/264 (16%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M ER+V SWT M+ G A+SG I +A ALF+ MP R+V SWNA++ QN EA+
Sbjct: 185 FDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAV 244
Query: 71 ELFERM---P---------------------------------ERDMAS----WNAMLTG 90
LF RM P RD++S N+++
Sbjct: 245 SLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDL 304
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQA--NGGLKPNN 148
+ + G L A +F +K + W SM+ +A HG SEEA+ +F +M +KP++
Sbjct: 305 YGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDH 364
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLIS-KTGFQENTRVVSALINMYSKCGELHIARKIFD 207
TF+ +L AC+ +++G+ L++ + G + LI++ + G A ++
Sbjct: 365 ITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMS 424
Query: 208 DGLLRQRDLISWNGMIAAYAHHGY 231
++ + I W ++ A HG+
Sbjct: 425 TMKMKADEAI-WGSLLNACKIHGH 447
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 129/293 (44%), Gaps = 51/293 (17%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQ----HGLSEEALKMFTKMQANGGLKPNNGTFV 152
L+ A +F + + +++T Y+ H S A F M +PN+ +
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASS--AFSFFRLMVNRSVPRPNHFIYP 130
Query: 153 TVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMY-SKCGELHIARKIFDDGLL 211
VL + L+S +H + K+GF V +AL++ Y S + +AR++FD+ +
Sbjct: 131 LVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDE--M 188
Query: 212 RQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDV-TYVELLTACSHAGLVDEG 270
+R+++SW M++ YA G + A+ LF M E DV ++ +L AC+ GL E
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPE-----RDVPSWNAILAACTQNGLFLEA 243
Query: 271 IQYFDKLLKNRSIQVKEDHYAC-----------------------------------LVD 295
+ F +++ SI+ E C LVD
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD 303
Query: 296 LCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKV 348
L G+ G L+EA + + + K SL+ W ++ +HG ++ V ++++K+
Sbjct: 304 LYGKCGNLEEASSVFK-MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKL 355
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/449 (31%), Positives = 248/449 (55%), Gaps = 42/449 (9%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM---PER-- 79
++D AK G + AR +F+ M ++ VSWN++I+GY Q+ L EA++LF+ M E+
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 80 ----------------------------------DMASWNAMLTGFFQNGELNRAEKLFA 105
D++ NA++ + + GE+ + K+F+
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ D +TW ++++ + G L++ T+M+ + P+ TF+ L C+ LA+
Sbjct: 468 SMGTGDTVTWNTVISACVRFGDFATGLQVTTQMR-KSEVVPDMATFLVTLPMCASLAAKR 526
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G++IH + + G++ ++ +ALI MYSKCG L + ++F+ + +RD+++W GMI A
Sbjct: 527 LGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER--MSRRDVVTWTGMIYA 584
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
Y +G G +A+ F M++ G + V ++ ++ ACSH+GLVDEG+ F+K+ + I
Sbjct: 585 YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
+HYAC+VDL R+ ++ +A I+ + +K S+W +L C G+ + + V+++I
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRI 704
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVG 405
+++ ++ G L SN YA++ KW + + +R +KDK + K PG SWIEVG V VF G
Sbjct: 705 IELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSG 764
Query: 406 DKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
D S QSE + L L++ M K G I D
Sbjct: 765 DDSAPQSEAIYKSLEILYSLMAKEGYIPD 793
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 181/373 (48%), Gaps = 45/373 (12%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
E D+ +VD ++ G + AR +FD MP+R++VSWN++I+GY+ + +EALE++
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 76 MPER----DMASWNAMLTGF-----FQNGE------------------------------ 96
+ D + +++L F + G+
Sbjct: 198 LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRR 257
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
A ++F E+ +D +++ +M+ GY + + EE+++MF ++ KP+ T +VL
Sbjct: 258 PTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLR 315
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
AC L L+ + I+ + K GF + V + LI++Y+KCG++ AR +F+ + +D
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS--MECKDT 373
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+SWN +I+ Y G EA+ LF M + QA+ +TY+ L++ + + G
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSN 433
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+K+ I + L+D+ + G + ++ I +G +++ W +++ C G+
Sbjct: 434 GIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACVRFGDFA 491
Query: 337 IGKLVAKKILKVE 349
G V ++ K E
Sbjct: 492 TGLQVTTQMRKSE 504
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 177/373 (47%), Gaps = 49/373 (13%)
Query: 40 ALFDRM-PLRNVVSWNAMITGYAQNRRLDEALELFERM------------P--------- 77
++F R+ P +NV WN++I +++N EALE + ++ P
Sbjct: 60 SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 78 ------------------ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
E D+ NA++ + + G L RA ++F E+P +D+++W S++
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
+GY+ HG EEAL+++ +++ N + P++ T +VL A L + +GQ +H K+G
Sbjct: 180 SGYSSHGYYEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
V + L+ MY K AR++FD+ + RD +S+N MI Y E++ +F
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDE--MDVRDSVSYNTMICGYLKLEMVEESVRMF 296
Query: 240 NKMQELG-FQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCG 298
++ L F+ + +T +L AC H + ++ +LK + ++ L+D+
Sbjct: 297 --LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV-LESTVRNILIDVYA 353
Query: 299 RAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN-ADIGKLVAKKILKVEHENAGTYS 357
+ G + A + + K ++S W +++G G+ + KL ++ E + TY
Sbjct: 354 KCGDMITARDVFNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYL 412
Query: 358 LLSNMYASVGKWK 370
+L ++ + K
Sbjct: 413 MLISVSTRLADLK 425
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 41/270 (15%)
Query: 31 KSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELF-----ERMPE------- 78
K R DAR +FD M +R+ VS+N MI GY + ++E++ +F + P+
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSV 313
Query: 79 -------RDMA----SWNAMLTGFF---------------QNGELNRAEKLFAELPQKDV 112
RD++ +N ML F + G++ A +F + KD
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
++W S+++GY Q G EA+K+F KM + ++ T++ ++ + LA L G+ +H
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
K+G + V +ALI+MY+KCGE+ + KIF + D ++WN +I+A G
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS--MGTGDTVTWNTVISACVRFGDF 490
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACS 262
+ + +M++ + T++ L C+
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 136/308 (44%), Gaps = 48/308 (15%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D+S ++D AK G + D+ +F M + V+WN +I+ + L++ +M
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 78 ER----DMASW-----------------------------------NAMLTGFFQNGELN 98
+ DMA++ NA++ + + G L
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLE 561
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
+ ++F + ++DV+TWT M+ Y +G E+AL+ F M+ G+ P++ F+ ++ AC
Sbjct: 562 NSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME-KSGIVPDSVVFIAIIYAC 620
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRV--VSALINMYSKCGELHIARKIFDDGLLRQRDL 216
S + EG + + KT ++ + + + ++++ S+ ++ A + F + + D
Sbjct: 621 SHSGLVDEGLACFEKM-KTHYKIDPMIEHYACVVDLLSRSQKISKAEE-FIQAMPIKPDA 678
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVD-EGIQYFD 275
W ++ A G A + ++ EL +D Y +L + ++A L + +
Sbjct: 679 SIWASVLRACRTSGDMETAERVSRRIIEL--NPDDPGY-SILASNAYAALRKWDKVSLIR 735
Query: 276 KLLKNRSI 283
K LK++ I
Sbjct: 736 KSLKDKHI 743
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
A S ++L E ++IH L+ G + LI+ YS E + +F + +++
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR-VSPAKNV 71
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE--GIQYF 274
WN +I A++ +G EA+ + K++E + T+ ++ AC AGL D G +
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVY 129
Query: 275 DKLLKNRSIQVKEDHYA--CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVH 332
+++L + + D + LVD+ R G L A + + + V+ L W L++G + H
Sbjct: 130 EQIL---DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSH 185
Query: 333 G 333
G
Sbjct: 186 G 186
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 223/356 (62%), Gaps = 5/356 (1%)
Query: 66 LDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP--QKDVITWTSMMTGYA 123
L +A ++F+ M +D+ WNA+L G+ + GE++ A L +P ++ ++WT +++GYA
Sbjct: 167 LGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYA 226
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
+ G + EA+++F +M ++P+ T + VL AC+ L SL G++I + G
Sbjct: 227 KSGRASEAIEVFQRMLMEN-VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAV 285
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
+ +A+I+MY+K G + A +F+ + +R++++W +IA A HG+G EA+ +FN+M
Sbjct: 286 SLNNAVIDMYAKSGNITKALDVFE--CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMV 343
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRL 303
+ G + NDVT++ +L+ACSH G VD G + F+ + I +HY C++DL GRAG+L
Sbjct: 344 KAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKL 403
Query: 304 KEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMY 363
+EA +I+ + K + ++WG LLA NVH + ++G+ +++K+E N+G Y LL+N+Y
Sbjct: 404 READEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLY 463
Query: 364 ASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLL 419
+++G+W E+ +R MK G+KK G S IEV N V F+ GD +H Q E + +L
Sbjct: 464 SNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEIL 519
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 135/262 (51%), Gaps = 45/262 (17%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP--LRNVVSWNAMITGYAQNRRLDE 68
F++M +DV+ W ++ G K G +D+AR+L + MP +RN VSW +I+GYA++ R E
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 69 ALELFERM------PE---------------------------------RDMASWNAMLT 89
A+E+F+RM P+ R ++ NA++
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVID 293
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
+ ++G + +A +F + +++V+TWT+++ G A HG EAL MF +M G++PN+
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM-VKAGVRPNDV 352
Query: 150 TFVTVLGACSGLASLTEGQQI-HQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD 208
TF+ +L ACS + + G+++ + + SK G N +I++ + G+L A ++
Sbjct: 353 TFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKS 412
Query: 209 GLLRQRDLISWNGMIAAY-AHH 229
+ I W ++AA HH
Sbjct: 413 MPFKANAAI-WGSLLAASNVHH 433
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 43/277 (15%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYA---QHGLSEEALKMFTKMQANGGLKPNNGTF 151
G L A +F P + +M+ + + A+ ++ K+ A KP+ TF
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCA-KPDTFTF 119
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL 211
VL ++ + G+QIH + GF + VV+ LI MY CG L ARK+FD+ L+
Sbjct: 120 PFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLV 179
Query: 212 RQ-------------------------------RDLISWNGMIAAYAHHGYGNEAINLFN 240
+ R+ +SW +I+ YA G +EAI +F
Sbjct: 180 KDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQ 239
Query: 241 KMQELGFQANDVTYVELLTACSHAGLVDEG---IQYFDKLLKNRSIQVKEDHYACLVDLC 297
+M + ++VT + +L+AC+ G ++ G Y D NR++ + ++D+
Sbjct: 240 RMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN----AVIDMY 295
Query: 298 GRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
++G + +A + E + + ++ W ++AG HG+
Sbjct: 296 AKSGNITKALDVFECVNER-NVVTWTTIIAGLATHGH 331
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 39/250 (15%)
Query: 4 DRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQN 63
+R C+ ++ R VS ++D AKSG I A +F+ + RNVV+W +I G A +
Sbjct: 270 ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATH 329
Query: 64 RRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYA 123
EAL +F RM + + + + +T+ ++++ +
Sbjct: 330 GHGAEALAMFNRMVKAGV---------------------------RPNDVTFIAILSACS 362
Query: 124 QHGLSEEALKMFTKMQANGGLKPN---NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQ 180
G + ++F M++ G+ PN G + +LG L ++ ++I F+
Sbjct: 363 HVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKL------READEVIKSMPFK 416
Query: 181 ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA--YAHHGYGNEAINL 238
N + +L+ + +L + + + L++ S N M+ A Y++ G +E+ +
Sbjct: 417 ANAAIWGSLLAASNVHHDLELGERALSE-LIKLEPNNSGNYMLLANLYSNLGRWDESRMM 475
Query: 239 FNKMQELGFQ 248
N M+ +G +
Sbjct: 476 RNMMKGIGVK 485
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 253/454 (55%), Gaps = 44/454 (9%)
Query: 17 RDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM 76
DV++ T+++ + SGR++DA LFD +P R+VV+W A+ +GY + R EA++LF++M
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKM 203
Query: 77 PER----------------------DMASW-----------------NAMLTGFFQNGEL 97
E D W ++ + + G++
Sbjct: 204 VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM 263
Query: 98 NRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM-QANGGLKPNNGTFVTVLG 156
+A +F + +KD++TW++M+ GYA + +E +++F +M Q N LKP+ + V L
Sbjct: 264 EKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN--LKPDQFSIVGFLS 321
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
+C+ L +L G+ LI + F N + +ALI+MY+KCG + ++F + ++++D+
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE--MKEKDI 379
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+ N I+ A +G+ + +F + ++LG + T++ LL C HAGL+ +G+++F+
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNA 439
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ +++ +HY C+VDL GRAG L +A+ +I + ++ + VWG LL+GC + +
Sbjct: 440 ISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQ 499
Query: 337 IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVG 396
+ + V K+++ +E NAG Y LSN+Y+ G+W EAA VR M KG+KK PG SWIE+
Sbjct: 500 LAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELE 559
Query: 397 NTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFG 430
V F+ DKSH S+ + L L +M+ G
Sbjct: 560 GKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 122/226 (53%), Gaps = 5/226 (2%)
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
LF+ ++ + S++ G+ + L E L +F ++ +G L + TF VL AC+ +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHG-LYLHGFTFPLVLKACTRAS 125
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
S G +H L+ K GF + +++L+++YS G L+ A K+FD+ + R +++W +
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE--IPDRSVVTWTAL 183
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
+ Y G EAI+LF KM E+G + + V++L+AC H G +D G ++ K ++
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG-EWIVKYMEEME 242
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+Q LV+L + G++++A + + + V+ + W ++ G
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 232/386 (60%), Gaps = 4/386 (1%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F+++ E+D SW ++ AK G + +A +LF MPL++ SWN +I GY R + A
Sbjct: 192 VFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLA 251
Query: 70 LELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSE 129
F+ MP+++ SW M++G+ + G++ AE+LF + +KD + + +M+ Y Q+G +
Sbjct: 252 RTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPK 311
Query: 130 EALKMFTKM-QANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
+ALK+F +M + N ++P+ T +V+ A S L + + G + I++ G + + + ++
Sbjct: 312 DALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTS 371
Query: 189 LINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
LI++Y K G+ A K+F + L ++D +S++ MI +G EA +LF M E
Sbjct: 372 LIDLYMKGGDFAKAFKMFSN--LNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIP 429
Query: 249 ANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFY 308
N VT+ LL+A SH+GLV EG + F+ + K+ +++ DHY +VD+ GRAGRL+EA+
Sbjct: 430 PNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYE 488
Query: 309 IIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGK 368
+I+ + ++ + VWG LL +H N + G++ +K+E + G S L+ +Y+SVG+
Sbjct: 489 LIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGR 548
Query: 369 WKEAANVRMKMKDKGLKKQPGCSWIE 394
W +A VR +K+K L K GCSW+E
Sbjct: 549 WDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 88 LTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPN 147
T F + +++ D +W ++ +QH +E + ++ M N G+ P+
Sbjct: 45 FTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMH-NSGIPPS 103
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD 207
+ +VL AC + ++ +G+ IH K G V + L+ +YS+ G + +A+K FD
Sbjct: 104 SHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFD 163
Query: 208 DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE 244
D + +++ +SWN ++ Y G +EA +F+K+ E
Sbjct: 164 D--IAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE 198
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 245/425 (57%), Gaps = 17/425 (4%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----------VSWNAMIT 58
+ F ++ ++ +WTT++ G G ++ +M L N V +A I
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID 227
Query: 59 GYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSM 118
+++ ++ +R + ++ N++L + + G L+ A+ F E+ KD+ITW ++
Sbjct: 228 SVTTGKQIHASV--IKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 119 MTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG 178
++ + S EAL MF + ++ G PN TF +++ AC+ +A+L GQQ+H I + G
Sbjct: 286 ISELERSD-SSEALLMFQRFESQG-FVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
F +N + +ALI+MY+KCG + ++++F + ++ +R+L+SW M+ Y HGYG EA+ L
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDSQRVFGE-IVDRRNLVSWTSMMIGYGSHGYGAEAVEL 402
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCG 298
F+KM G + + + ++ +L+AC HAGLV++G++YF+ + I D Y C+VDL G
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462
Query: 299 RAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG-NADIGKLVAKKILKVEHENAGTYS 357
RAG++ EA+ ++E + K S WG +L C H N I +L A+K+++++ + GTY
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYV 522
Query: 358 LLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEY 417
+LS +YA+ GKW + A VR M+ G KK+ G SWI V N V F V DK + + Y
Sbjct: 523 MLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSV-Y 581
Query: 418 LLLGL 422
+LGL
Sbjct: 582 SVLGL 586
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 174/355 (49%), Gaps = 53/355 (14%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPE---- 78
T ++ + G +++AR+LFD MP R+VV+W AMITGYA + A E F M +
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 79 -------------RDMA--SWNAMLTG-----------FFQNGELN----------RAEK 102
R+M ++ A++ G + N +N A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM-QANGGLKPNNGTFVTVLGACSGL 161
+F ++ K+ +TWT+++TG+ G LKM+ +M N + P T + A + +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASI 226
Query: 162 ASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
S+T G+QIH + K GFQ N V+++++++Y +CG L A+ F + + +DLI+WN
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHE--MEDKDLITWNT 284
Query: 222 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK-- 279
+I+ +EA+ +F + + GF N T+ L+ AC++ ++ G Q ++ +
Sbjct: 285 LISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG 343
Query: 280 -NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
N+++++ L+D+ + G + ++ + + + +L W ++ G HG
Sbjct: 344 FNKNVELAN----ALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 223/378 (58%), Gaps = 5/378 (1%)
Query: 49 NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP 108
NV +A++ Y + L +A F+ + ++ S +++G+ + E A LF +P
Sbjct: 127 NVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP 186
Query: 109 QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
++ V+TW +++ G++Q G +EEA+ F M G + PN TF + A S +AS G+
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGK 246
Query: 169 QIHQL-ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
IH I G + N V ++LI+ YSKCG + + F+ QR+++SWN MI YA
Sbjct: 247 SIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYA 306
Query: 228 HHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQ-- 284
H+G G EA+ +F KM ++ + N+VT + +L AC+HAGL+ EG YF+K + +
Sbjct: 307 HNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNL 366
Query: 285 VKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKK 344
++ +HYAC+VD+ R+GR KEA +I+ + + + W LL GC +H N + KL A K
Sbjct: 367 LELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASK 426
Query: 345 ILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVV 404
IL+++ + +Y +LSN Y+++ W+ + +R KMK+ GLK+ GCSWIEV + ++VFV
Sbjct: 427 ILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVN 486
Query: 405 GDKSHSQSEMLEYLLLGL 422
DK++ + + Y +L L
Sbjct: 487 ADKNNELKDEV-YRMLAL 503
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 15/295 (5%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
+ A K+F E+P+ DVI+ T+++ + + EA + F ++ G++PN TF TV+G
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLC-LGIRPNEFTFGTVIG 101
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
+ + + G+Q+H K G N V SA++N Y K L AR+ FDD R ++
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDT--RDPNV 159
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+S +I+ Y EA++LF M E VT+ ++ S G +E + F
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 277 LLKNRSIQVKEDHYACLVDLCGR-----AGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNV 331
+L+ + E + C + AG+ A I+ LG + ++ VW L++ +
Sbjct: 216 MLREGVVIPNESTFPCAITAISNIASHGAGKSIHA-CAIKFLGKRFNVFVWNSLISFYSK 274
Query: 332 HGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKM-KDKGLK 385
GN + L+A L+ E N +++ + YA G+ +EA + KM KD L+
Sbjct: 275 CGNME-DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLR 328
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 43/201 (21%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F+ ++ +V S T ++ G K ++A +LF MP R+VV+WNA+I G++Q R +EA
Sbjct: 150 CFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEA 209
Query: 70 LELFERM-------PER-----------DMAS-----------------------WNAML 88
+ F M P ++AS WN+++
Sbjct: 210 VNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLI 269
Query: 89 TGFFQNGELNRAEKLFAEL--PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
+ + + G + + F +L Q+++++W SM+ GYA +G EEA+ MF KM + L+P
Sbjct: 270 SFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRP 329
Query: 147 NNGTFVTVLGACSGLASLTEG 167
NN T + VL AC+ + EG
Sbjct: 330 NNVTILGVLFACNHAGLIQEG 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMP--LRNVVSWNAMITGYAQNRRLDEALELFER 75
+V W +++ +K G ++D+ F+++ RN+VSWN+MI GYA N R +EA+ +FE+
Sbjct: 261 NVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEK 320
Query: 76 M-PERDMASWNAML---------TGFFQNGEL--NRAEKLFAELPQKDVITWTSMMTGYA 123
M + ++ N + G Q G + N+A + + ++ + M+ +
Sbjct: 321 MVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLS 380
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
+ G +EA ++ M L P G + +LG C + +++ +L + + +
Sbjct: 381 RSGRFKEAEELIKSMP----LDPGIGFWKALLGGC----QIHSNKRLAKLAASKILELDP 432
Query: 184 RVVSALI---NMYSKCGELH----IARKIFDDGLLR 212
R VS+ + N YS I RK+ + GL R
Sbjct: 433 RDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKR 468
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 235/399 (58%), Gaps = 16/399 (4%)
Query: 52 SWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQ-- 109
S NA+I Y + ++ +A LF ++ + + SWN+++T F G+L+ A LF+EL +
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 110 ------KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
+V+TWTS++ G G +++L+ F +MQ + L N+ T +L C+ L +
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL-ANSVTICCILSICAELPA 449
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
L G++IH + +T EN V +AL+NMY+KCG L +F+ +R +DLISWN +I
Sbjct: 450 LNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEA--IRDKDLISWNSII 507
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
Y HG+ +A+++F++M GF + + V +L+ACSHAGLV++G + F + K +
Sbjct: 508 KGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGL 567
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
+ +++HYAC+VDL GR G LKEA I++ + ++ + V G LL C +H N DI + +A
Sbjct: 568 EPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIAS 627
Query: 344 KILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFV 403
++ +E E G+Y LLSN+Y++ G+W+E+ANVR K K LKK G SWIEV F
Sbjct: 628 QLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFS 687
Query: 404 VGDKSHSQSEMLEYLLLGLHTKMKKFGDILD-----DDL 437
G S+ E + +L L + M K G D DDL
Sbjct: 688 SGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDDL 726
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 160/339 (47%), Gaps = 43/339 (12%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFA----ELPQ 109
N ++T Y + R+ +A LF MP R+ SWN M+ GF Q + A K+F E +
Sbjct: 197 NELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFK 256
Query: 110 KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
D +TWTS+++ ++Q G E+ LK F M+ +G + C+ L +L+ ++
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGN-AVSGEALAVFFSVCAELEALSIAEK 315
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
+H + K GF+E +ALI++Y K G++ A +F +R + + SWN +I ++
Sbjct: 316 VHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ--IRNKGIESWNSLITSFVDA 373
Query: 230 GYGNEAINLFNKMQEL----GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
G +EA++LF++++E+ +AN VT+ ++ C+ G D+ ++YF ++ ++ +
Sbjct: 374 GKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSK-VLA 432
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
C++ +C L G +HG+ I
Sbjct: 433 NSVTICCILSICAELPALN----------------------LGREIHGHV---------I 461
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
EN + L NMYA G E + V ++DK L
Sbjct: 462 RTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDL 500
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 35/275 (12%)
Query: 111 DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQI 170
D+ W S++ HGL E AL+++ M+ G L + +L AC L +
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRG-LTGDGYILPLILRACRYLGRFGLCRAF 180
Query: 171 HQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
H + + G +EN VV+ L+ +Y K G + A +F + +R R +SWN MI ++
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNR--MSWNVMIKGFSQEY 238
Query: 231 YGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
A+ +F MQ F+ ++VT+ +L+ S G ++ ++YF L++ V +
Sbjct: 239 DCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYF-HLMRMSGNAVSGEAL 297
Query: 291 ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH 350
A +C EA I E VHG G
Sbjct: 298 AVFFSVCAEL----EALSIAE------------------KVHGYVIKGGF---------E 326
Query: 351 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
E + + L ++Y GK K+A ++ ++++KG++
Sbjct: 327 EYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE 361
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 10/200 (5%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQNRRLDEALELF 73
+V +WT+++ G GR DD+ F +M L N V+ +++ A+ L+ E+
Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIH 457
Query: 74 ERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSE 129
+ M+ NA++ + + G L+ +F + KD+I+W S++ GY HG +E
Sbjct: 458 GHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAE 517
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSA 188
+AL MF +M + G P+ V VL ACS + +G++I +SK G + +
Sbjct: 518 KALSMFDRM-ISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYAC 576
Query: 189 LINMYSKCGELHIARKIFDD 208
++++ + G L A +I +
Sbjct: 577 IVDLLGRVGFLKEASEIVKN 596
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 243/439 (55%), Gaps = 46/439 (10%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDM-- 81
++VD +K GRI++A +F R+ R+++SWNAMI G+ +AL+ F M E ++
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 82 ------------------------------------ASWNAMLTG-----FFQNGELNRA 100
+A +TG + + G L A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 101 EKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSG 160
K F ++ +K +I+W+S++ GYAQ G EA+ +F ++Q + ++ +++G +
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFAD 325
Query: 161 LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWN 220
A L +G+Q+ L K T V++++++MY KCG + A K F + ++ +D+ISW
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAE--MQLKDVISWT 383
Query: 221 GMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN 280
+I Y HG G +++ +F +M + ++V Y+ +L+ACSH+G++ EG + F KLL+
Sbjct: 384 VVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 443
Query: 281 RSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKL 340
I+ + +HYAC+VDL GRAGRLKEA ++I+ + +K ++ +W LL+ C VHG+ ++GK
Sbjct: 444 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 503
Query: 341 VAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQ 400
V K +L+++ +N Y ++SN+Y G W E N R KGLKK+ G SW+E+ V
Sbjct: 504 VGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVH 563
Query: 401 VFVVGDKSHSQSEMLEYLL 419
F G+ SH + +++ L
Sbjct: 564 FFRSGEDSHPLTPVIQETL 582
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 138/252 (54%), Gaps = 7/252 (2%)
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
++ + N ++ + + E A K+F +P+++V++W+++M+G+ +G + +L +F++M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM- 98
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
G+ PN TF T L AC L +L +G QIH K GF+ V ++L++MYSKCG +
Sbjct: 99 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ--ANDVTYVEL 257
+ A K+F + R LISWN MIA + H GYG++A++ F MQE + ++ T L
Sbjct: 159 NEAEKVFRR--IVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSL 216
Query: 258 LTACSHAGLVDEGIQYFDKLLKN-RSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVK 316
L ACS G++ G Q L+++ LVDL + G L A + + K
Sbjct: 217 LKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK 276
Query: 317 LSLSVWGPLLAG 328
+S W L+ G
Sbjct: 277 TMIS-WSSLILG 287
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 168/339 (49%), Gaps = 23/339 (6%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRR 65
F+ M ER+V SW+ ++ G +G + + +LF M + N +++ +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 66 LDEALEL--------FERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTS 117
L++ L++ FE M E N+++ + + G +N AEK+F + + +I+W +
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVG----NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 118 MMTGYAQHGLSEEALKMFTKMQ-ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK 176
M+ G+ G +AL F MQ AN +P+ T ++L ACS + G+QIH + +
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 177 TGFQ--ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNE 234
+GF + + +L+++Y KCG L ARK FD ++++ +ISW+ +I YA G E
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ--IKEKTMISWSSLILGYAQEGEFVE 296
Query: 235 AINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLV 294
A+ LF ++QEL Q + ++ + L+ +G Q +K S ++ +V
Sbjct: 297 AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPS-GLETSVLNSVV 355
Query: 295 DLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
D+ + G + EA + +K +S W ++ G HG
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVIS-WTVVITGYGKHG 393
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 125/230 (54%), Gaps = 11/230 (4%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRN-------VVSWNAMITGYAQ 62
AF+Q++E+ + SW++++ G A+ G +A LF R+ N + S + +A
Sbjct: 269 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL 328
Query: 63 NRRLDEALELFERMPE-RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
R+ + L ++P + + N+++ + + G ++ AEK FAE+ KDVI+WT ++TG
Sbjct: 329 LRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 388
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQI-HQLISKTGFQ 180
Y +HGL ++++++F +M + ++P+ ++ VL ACS + EG+++ +L+ G +
Sbjct: 389 YGKHGLGKKSVRIFYEMLRH-NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIK 447
Query: 181 ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
+ ++++ + G L A+ + D ++ I W +++ HG
Sbjct: 448 PRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI-WQTLLSLCRVHG 496
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 5/184 (2%)
Query: 146 PNN-GTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
PN V++L C+ +G Q+H + K+G N + LI+MY KC E +A K
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+FD + +R+++SW+ +++ + +G +++LF++M G N+ T+ L AC
Sbjct: 63 VFDS--MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
+++G+Q LK ++ + LVD+ + GR+ EA + + V SL W
Sbjct: 121 NALEKGLQIHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNA 178
Query: 325 LLAG 328
++AG
Sbjct: 179 MIAG 182
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
+ S ++VD K G +D+A F M L++V+SW +ITGY ++ +++ +F M
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 77 ---PERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVIT-----WTSMMTGYAQHGLS 128
E D + A+L+ +G + E+LF++L + I + ++ + G
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 466
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
+EA + M +KPN G + T+L C + G+++ +++ + + V
Sbjct: 467 KEAKHLIDTMP----IKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYV-M 521
Query: 189 LINMYSKCG---ELHIARKIFDDGLLRQRDLISW 219
+ N+Y + G E AR++ + L++ +SW
Sbjct: 522 MSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSW 555
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 238/420 (56%), Gaps = 46/420 (10%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
D+ T ++D AKS I AR +FD +N V+W+AMI GY +N + EA E+F +M
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 77 ---------PER-------------------------------DMASWNAMLTGFFQNGE 96
P D+ N +++ + + G
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
L A + F+E+ KDVI++ S++TG + EE+ ++F +M+ +G ++P+ T + VL
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG-IRPDITTLLGVLT 417
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
ACS LA+L G H G+ NT + +AL++MY+KCG+L +A+++FD + +RD+
Sbjct: 418 ACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDT--MHKRDI 475
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+SWN M+ + HG G EA++LFN MQE G ++VT + +L+ACSH+GLVDEG Q F+
Sbjct: 476 VSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNS 535
Query: 277 LLK-NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
+ + + ++ + DHY C+ DL RAG L EA+ + + + + V G LL+ C + NA
Sbjct: 536 MSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNA 595
Query: 336 DIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
++G V+KK+ + E + LLSN Y++ +W++AA +RM K +GL K PG SW++V
Sbjct: 596 ELGNEVSKKMQSLG-ETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 104/178 (58%), Gaps = 6/178 (3%)
Query: 96 ELNRAEKLFAELPQKDV--ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVT 153
E+ A +F E+P + I W M+ YA + +E+AL ++ KM N G++P T+
Sbjct: 50 EVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKM-LNSGVRPTKYTYPF 108
Query: 154 VLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ 213
VL AC+GL ++ +G+ IH ++ + F + V +AL++ Y+KCGEL +A K+FD+ + +
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE--MPK 166
Query: 214 RDLISWNGMIAAYAHHGYGNEAINLFNKMQEL-GFQANDVTYVELLTACSHAGLVDEG 270
RD+++WN MI+ ++ H + I LF M+ + G N T V + A AG + EG
Sbjct: 167 RDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 167/367 (45%), Gaps = 64/367 (17%)
Query: 19 VSSWTTMVDG---LAKSGRIDDARALFDRMPLR--NVVSWNAMITGYAQNRRLDEALELF 73
+SS T +V+ A ++ AR +FD +P N ++W+ MI YA N ++AL+L+
Sbjct: 32 LSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLY 91
Query: 74 ERM------PER---------------------------------DMASWNAMLTGFFQN 94
+M P + DM A++ + +
Sbjct: 92 YKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKC 151
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
GEL A K+F E+P++D++ W +M++G++ H + + +F M+ GL PN T V +
Sbjct: 152 GELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
A +L EG+ +H ++ GF + V + ++++Y+K + AR++FD L ++
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD--LDFKK 269
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
+ ++W+ MI Y + EA +F +M ND V ++T + GL+ G F
Sbjct: 270 NEVTWSAMIGGYVENEMIKEAGEVFFQM-----LVND--NVAMVTPVA-IGLILMGCARF 321
Query: 275 DKLLKNRSIQVKEDHYACLVDLC---------GRAGRLKEAFYIIEGLGVKLSLSVWGPL 325
L R + ++DL + G L +AF +G+K +S + L
Sbjct: 322 GDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVIS-YNSL 380
Query: 326 LAGCNVH 332
+ GC V+
Sbjct: 381 ITGCVVN 387
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 165/362 (45%), Gaps = 55/362 (15%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D+ T +VD AK G ++ A +FD MP R++V+WNAMI+G++ + L + + LF M
Sbjct: 137 DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR 196
Query: 78 ERDMASWN-AMLTGFFQ--------------NGELNR----------------------- 99
D S N + + G F +G R
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCI 256
Query: 100 --AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVT---- 153
A ++F +K+ +TW++M+ GY ++ + +EA ++F +M N +N VT
Sbjct: 257 IYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN-----DNVAMVTPVAI 311
Query: 154 --VLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL 211
+L C+ L+ G+ +H K GF + V + +I+ Y+K G L A + F + +
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSE--I 369
Query: 212 RQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGI 271
+D+IS+N +I + E+ LF++M+ G + + T + +LTACSH + G
Sbjct: 370 GLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGS 429
Query: 272 QYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNV 331
+ + V L+D+ + G+L A + + + K + W +L G +
Sbjct: 430 SCHGYCVVH-GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTMLFGFGI 487
Query: 332 HG 333
HG
Sbjct: 488 HG 489
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 151 FVTVLGACSGLASLTEGQQIHQ-LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
F+++L C +L GQ IHQ L+ ++ ++ V+ L +Y+ C E+ +AR +FD+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
+ + I+W+ MI AYA + + +A++L+ KM G + TY +L AC+ +D+
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 270 GIQYFDKLLKNR--SIQVKEDHYAC--LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPL 325
G KL+ + D Y C LVD + G L+ A + + + K + W +
Sbjct: 122 G-----KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAM 175
Query: 326 LAGCNVH 332
++G ++H
Sbjct: 176 ISGFSLH 182
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 252/460 (54%), Gaps = 44/460 (9%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER--- 79
T ++D +++ + +A LF+R ++V+WNAM+ GY Q+ + L+LF M ++
Sbjct: 456 TALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 80 ----------------------------------DMASW--NAMLTGFFQNGELNRAEKL 103
D+ W + +L + + G+++ A+
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F +P D + WT+M++G ++G E A +F++M+ G L P+ T T+ A S L +
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASSCLTA 633
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
L +G+QIH K + V ++L++MY+KCG + A +F + ++ +WN M+
Sbjct: 634 LEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKR--IEMMNITAWNAML 691
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
A HG G E + LF +M+ LG + + VT++ +L+ACSH+GLV E ++ + + I
Sbjct: 692 VGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGI 751
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
+ + +HY+CL D GRAG +K+A +IE + ++ S S++ LLA C V G+ + GK VA
Sbjct: 752 KPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVAT 811
Query: 344 KILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFV 403
K+L++E ++ Y LLSNMYA+ KW E R MK +KK PG SWIEV N + +FV
Sbjct: 812 KLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFV 871
Query: 404 VGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLSR-DVE 442
V D+S+ Q+E++ + + +K+ G + + D + DVE
Sbjct: 872 VDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 911
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 161/352 (45%), Gaps = 50/352 (14%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELF---------- 73
++++ K + AR +FD M R+++SWN++I G AQN EA+ LF
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 74 ------------ERMPE------------------RDMASWNAMLTGFFQNGELNRAEKL 103
+PE D A++ + +N + AE L
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEIL 474
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F E D++ W +MM GY Q + LK+F M G + ++ T TV C L +
Sbjct: 475 F-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLFA 532
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
+ +G+Q+H K+G+ + V S +++MY KCG++ A+ FD + D ++W MI
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS--IPVPDDVAWTTMI 590
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
+ +G A ++F++M+ +G ++ T L A S +++G Q LK +
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK---L 647
Query: 284 QVKEDHYA--CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
D + LVD+ + G + +A+ + + + + ++++ W +L G HG
Sbjct: 648 NCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHG 698
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 145/323 (44%), Gaps = 36/323 (11%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------PE 78
+V+ K G++ + + LF+ MP R+VV WN M+ Y + +EA++L P
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 79 RDMASWNAMLTG---------FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSE 129
A ++G F NG N A + ++I ++ Y G
Sbjct: 246 EITLRLLARISGDDSDAGQVKSFANG--NDASSV------SEIIFRNKGLSEYLHSGQYS 297
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSAL 189
LK F M ++ + TF+ +L + SL GQQ+H + K G V ++L
Sbjct: 298 ALLKCFADM-VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 190 INMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQA 249
INMY K + AR +FD+ + +RDLISWN +IA A +G EA+ LF ++ G +
Sbjct: 357 INMYCKLRKFGFARTVFDN--MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 250 NDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVK--EDHYA--CLVDLCGRAGRLKE 305
+ T +L A S + EG+ K + +I++ D + L+D R +KE
Sbjct: 415 DQYTMTSVLKAASS---LPEGLS-LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 306 AFYIIEGLGVKLSLSVWGPLLAG 328
A + E L W ++AG
Sbjct: 471 AEILFERHN--FDLVAWNAMMAG 491
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 47 LRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAE 106
LRN ++ + ++ G + R+ FE PER + N +++ + + G L A ++F +
Sbjct: 46 LRNAITSSDLMLGKCTHARI----LTFEENPERFLI--NNLISMYSKCGSLTYARRVFDK 99
Query: 107 LPQKDVITWTSMMTGYAQHGLS-----EEALKMFTKMQANGGLKPNNGTFVTVLGACSGL 161
+P +D+++W S++ YAQ ++A +F ++ + + + T +L C
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD-VVYTSRMTLSPMLKLCLHS 158
Query: 162 ASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
+ + H K G + V AL+N+Y K G++ + +F++ + RD++ WN
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEE--MPYRDVVLWNL 216
Query: 222 MIAAYAHHGYGNEAINLFNKMQELGFQANDVT 253
M+ AY G+ EAI+L + G N++T
Sbjct: 217 MLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDE 68
AF+ + D +WTTM+ G ++G + A +F +M L V+ I A+
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 69 ALELFERMP--------ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMT 120
ALE ++ D +++ + + G ++ A LF + ++ W +M+
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692
Query: 121 GYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC--SGLAS 163
G AQHG +E L++F +M++ G+KP+ TF+ VL AC SGL S
Sbjct: 693 GLAQHGEGKETLQLFKQMKS-LGIKPDKVTFIGVLSACSHSGLVS 736
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 257 bits (657), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 234/416 (56%), Gaps = 42/416 (10%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D+ ++V G +A +F MP+R+VVSW +ITG+ + EAL+ F +M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 78 -ERDMASW-----------------------------------NAMLTGFFQNGELNRAE 101
E ++A++ NA++ + + +L+ A
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 102 KLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGL 161
++F EL +KD ++W SM++G S+EA+ +F+ MQ + G+KP+ +VL AC+ L
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL 319
Query: 162 ASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
++ G+ +H+ I G + +T + +A+++MY+KCG + A +IF+ +R +++ +WN
Sbjct: 320 GAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNG--IRSKNVFTWNA 377
Query: 222 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNR 281
++ A HG+G E++ F +M +LGF+ N VT++ L AC H GLVDEG +YF K +K+R
Sbjct: 378 LLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK-MKSR 436
Query: 282 SIQV--KEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN-ADIG 338
+ K +HY C++DL RAG L EA +++ + VK + + G +L+ C G ++
Sbjct: 437 EYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELP 496
Query: 339 KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIE 394
K + L +E E++G Y LLSN++A+ +W + A +R MK KG+ K PG S+IE
Sbjct: 497 KEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 8/215 (3%)
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
++ ++++ YA + + +NG P+ TF V AC + + EG+QIH +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNG-FSPDMFTFPPVFKACGKFSGIREGKQIHGI 131
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
++K GF ++ V ++L++ Y CGE A K+F G + RD++SW G+I + G
Sbjct: 132 VTKMGFYDDIYVQNSLVHFYGVCGESRNACKVF--GEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
EA++ F+KM + N TYV +L + G + G +LK S+ E A L
Sbjct: 190 EALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNA-L 245
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+D+ + +L +A + L K +S W +++G
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVS-WNSMISG 279
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 228/386 (59%), Gaps = 6/386 (1%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
+++ Y+ L A +F+ +D+ +WN+++ + + G ++ A KLF E+P+++VI
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI 160
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQA----NGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
+W+ ++ GY G +EAL +F +MQ ++PN T TVL AC L +L +G+
Sbjct: 161 SWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKW 220
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
+H I K + + + +ALI+MY+KCG L A+++F+ L ++D+ +++ MI A +
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN-ALGSKKDVKAYSAMICCLAMY 279
Query: 230 GYGNEAINLFNKMQEL-GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED 288
G +E LF++M N VT+V +L AC H GL++EG YF +++ I
Sbjct: 280 GLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQ 339
Query: 289 HYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKV 348
HY C+VDL GR+G +KEA I + ++ + +WG LL+G + G+ + K+++++
Sbjct: 340 HYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIEL 399
Query: 349 EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKS 408
+ N+G Y LLSN+YA G+W E +R +M+ KG+ K PGCS++EV V FVVGD+S
Sbjct: 400 DPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDES 459
Query: 409 HSQSEMLEYLLLGLHTKMKKFGDILD 434
+SE + +L + ++++ G + D
Sbjct: 460 QQESERIYAMLDEIMQRLREAGYVTD 485
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 127/266 (47%), Gaps = 47/266 (17%)
Query: 5 RGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNR 64
R F+ +D+ +W ++V+ AK+G IDDAR LFD MP RNV+SW+ +I GY
Sbjct: 114 RSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCG 173
Query: 65 RLDEALELFERMP--------------------------------------------ERD 80
+ EAL+LF M E D
Sbjct: 174 KYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEID 233
Query: 81 MASWNAMLTGFFQNGELNRAEKLFAEL-PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
+ A++ + + G L RA+++F L +KDV +++M+ A +GL++E ++F++M
Sbjct: 234 IVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMT 293
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ-LISKTGFQENTRVVSALINMYSKCGE 198
+ + PN+ TFV +LGAC + EG+ + +I + G + + ++++Y + G
Sbjct: 294 TSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGL 353
Query: 199 LHIARKIFDDGLLRQRDLISWNGMIA 224
+ A F + + D++ W +++
Sbjct: 354 IKEAES-FIASMPMEPDVLIWGSLLS 378
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 36/240 (15%)
Query: 131 ALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALI 190
+ ++ +M+ N + P+ TF +L + L GQ+ H I G ++ V ++L+
Sbjct: 46 PISVYLRMR-NHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLL 104
Query: 191 NMYSKCGELHIARKIFDD-------------------GLL----------RQRDLISWNG 221
NMYS CG+L A+++FDD GL+ +R++ISW+
Sbjct: 105 NMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSC 164
Query: 222 MIAAYAHHGYGNEAINLFNKMQ-----ELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+I Y G EA++LF +MQ E + N+ T +L+AC G +++G ++
Sbjct: 165 LINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KWVHA 223
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ +++ L+D+ + G L+ A + LG K + + ++ ++G D
Sbjct: 224 YIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTD 283
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 239/443 (53%), Gaps = 42/443 (9%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP----------------------- 46
F++ RD+ SW +++G K G + A ++ M
Sbjct: 213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGD 272
Query: 47 ---------------LRNVVSW-NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTG 90
LR + NA++ +++ + EA +F+ + +R + SW M++G
Sbjct: 273 LNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISG 332
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ + G L+ + KLF ++ +KDV+ W +M+ G Q ++AL +F +MQ + KP+ T
Sbjct: 333 YARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNT-KPDEIT 391
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
+ L ACS L +L G IH+ I K N + ++L++MY+KCG + A +F
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHG-- 449
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
++ R+ +++ +I A HG + AI+ FN+M + G +++T++ LL+AC H G++ G
Sbjct: 450 IQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTG 509
Query: 271 IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCN 330
YF ++ ++ + HY+ +VDL GRAG L+EA ++E + ++ +VWG LL GC
Sbjct: 510 RDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCR 569
Query: 331 VHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 390
+HGN ++G+ AKK+L+++ ++G Y LL MY W++A R M ++G++K PGC
Sbjct: 570 MHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGC 629
Query: 391 SWIEVGNTVQVFVVGDKSHSQSE 413
S IEV V F+V DKS +SE
Sbjct: 630 SSIEVNGIVCEFIVRDKSRPESE 652
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 184/381 (48%), Gaps = 78/381 (20%)
Query: 28 GLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM---------PE 78
L++S +D + + + N+ SWN I G++++ E+ L+++M P+
Sbjct: 96 ALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPD 155
Query: 79 R-------------DMASWNAMLTG--------------------FFQNGELNRAEKLFA 105
++S M+ G F G++ A K+F
Sbjct: 156 HFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD 215
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
E P +D+++W ++ GY + G +E+A+ ++ M++ G +KP++ T + ++ +CS L L
Sbjct: 216 ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEG-VKPDDVTMIGLVSSCSMLGDLN 274
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G++ ++ + + G + +V+AL++M+SKCG++H AR+IFD+ L +R ++SW MI+
Sbjct: 275 RGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN--LEKRTIVSWTTMISG 332
Query: 226 YAHHGY-------------------------------GNEAINLFNKMQELGFQANDVTY 254
YA G G +A+ LF +MQ + +++T
Sbjct: 333 YARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 255 VELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLG 314
+ L+ACS G +D GI + + ++ S+ + LVD+ + G + EA + G+
Sbjct: 393 IHCLSACSQLGALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 315 VKLSLSVWGPLLAGCNVHGNA 335
+ SL+ + ++ G +HG+A
Sbjct: 452 TRNSLT-YTAIIGGLALHGDA 471
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 129/245 (52%), Gaps = 6/245 (2%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL--KPNNGTFVTV 154
L+ + K+ + ++ +W + G+++ +E+ ++ +M +G +P++ T+ +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
C+ L + G I + K + + V +A I+M++ CG++ ARK+FD+ +R
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR-- 220
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
DL+SWN +I Y G +AI ++ M+ G + +DVT + L+++CS G ++ G +++
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 275 DKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
+ +K +++ L+D+ + G + EA I + L K ++ W +++G G
Sbjct: 281 E-YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISGYARCGL 338
Query: 335 ADIGK 339
D+ +
Sbjct: 339 LDVSR 343
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 232/417 (55%), Gaps = 11/417 (2%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVV----SWNAMITGYAQNRRL 66
F M ERDV SWT+++ + G+ A F +M V ++ +M + A RL
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 67 DEALELFERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
+L + ++ N+M+ + G L A LF + +D+I+W++++ GY
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGY 386
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
Q G EE K F+ M+ G KP + ++L +A + G+Q+H L G ++N
Sbjct: 387 CQAGFGEEGFKYFSWMR-QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQN 445
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
+ V S+LINMYSKCG + A IF G + D++S MI YA HG EAI+LF K
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIF--GETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKS 503
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
++GF+ + VT++ +LTAC+H+G +D G YF+ + + +++ ++HY C+VDL RAGR
Sbjct: 504 LKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGR 563
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNM 362
L +A +I + K VW LL C G+ + G+ A++IL+++ A L+N+
Sbjct: 564 LSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANI 623
Query: 363 YASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLL 419
Y+S G +EAANVR MK KG+ K+PG S I++ + V FV GD+ H QSE + +L
Sbjct: 624 YSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 160/344 (46%), Gaps = 52/344 (15%)
Query: 29 LAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM--------PERD 80
L +G + AR +FD+MP ++VSW ++I Y DEAL LF M P+
Sbjct: 50 LINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTS 109
Query: 81 MASW---------------------------------NAMLTGFFQNGELNRAEKLFAEL 107
+ S +++L + + G+++++ ++F+E+
Sbjct: 110 VLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 108 PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEG 167
P ++ +TWT+++TG G +E L F++M + L + TF L AC+GL + G
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLRQVKYG 228
Query: 168 QQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
+ IH + GF V ++L MY++CGE+ +F++ + +RD++SW +I AY
Sbjct: 229 KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFEN--MSERDVVSWTSLIVAYK 286
Query: 228 HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK---NRSIQ 284
G +A+ F KM+ N+ T+ + +AC+ + G Q +L N S+
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 285 VKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
V ++ + G L A + +G+ + +S W ++ G
Sbjct: 347 VSNS----MMKMYSTCGNLVSASVLFQGMRCRDIIS-WSTIIGG 385
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ-ANGG 143
N+ L G L A ++F ++P D+++WTS++ Y S+EAL +F+ M+ +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR 203
+ P+ VL AC +++ G+ +H KT + V S+L++MY + G++ +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
++F + + R+ ++W +I H G E + F++M ++ T+ L AC
Sbjct: 164 RVFSE--MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC-- 219
Query: 264 AGL 266
AGL
Sbjct: 220 AGL 222
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 113/237 (47%), Gaps = 21/237 (8%)
Query: 8 TMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM-------------PLRNVVSWN 54
++ F M+ RD+ SW+T++ G ++G ++ F M L +V
Sbjct: 365 SVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNM 424
Query: 55 AMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVIT 114
A+I G Q L L E++ ++++ + + G + A +F E + D+++
Sbjct: 425 AVIEGGRQVHALALCFGL-----EQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVS 479
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
T+M+ GYA+HG S+EA+ +F K G +P++ TF++VL AC+ L G ++
Sbjct: 480 LTAMINGYAEHGKSKEAIDLFEK-SLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMM 538
Query: 175 SKT-GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
+T + ++++ + G L A K+ ++ ++ D++ W ++ A G
Sbjct: 539 QETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV-WTTLLIACKAKG 594
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 238/442 (53%), Gaps = 46/442 (10%)
Query: 7 CTMAFNQMQER-DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVS---WNAMITGYAQ 62
C++ N R + + ++ + R+D AR +FD + ++++ W AM GY++
Sbjct: 154 CSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSR 213
Query: 63 NRRLDEAL---------------------------------------ELFERMPERDMAS 83
N +AL ++ +R + D
Sbjct: 214 NGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVV 273
Query: 84 WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGG 143
+N +L + ++G + A K+F + +++V+TW S+++ ++ E +F KMQ
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM- 332
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR 203
+ + T T+L ACS +A+L G++IH I K+ + + ++++L++MY KCGE+ +R
Sbjct: 333 IGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSR 392
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
++FD ++ +DL SWN M+ YA +G E INLF M E G + +T+V LL+ CS
Sbjct: 393 RVFD--VMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSD 450
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWG 323
GL + G+ F+++ + +HYACLVD+ GRAG++KEA +IE + K S S+WG
Sbjct: 451 TGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWG 510
Query: 324 PLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 383
LL C +HGN +G++ AK++ +E N G Y ++SN+YA W +R MK +G
Sbjct: 511 SLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRG 570
Query: 384 LKKQPGCSWIEVGNTVQVFVVG 405
+KK+ GCSW++V + +Q+FV G
Sbjct: 571 VKKEAGCSWVQVKDKIQIFVAG 592
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 130/304 (42%), Gaps = 20/304 (6%)
Query: 33 GRIDDARALFDRMPLRNVVSWNAMI----TGYAQNRRLDEALELFERMPERDMASWNAML 88
GR D R + + R V + T + + L L F MP D+ + A L
Sbjct: 18 GRYDGVRTMVGKASNRAGVHVTDTVLFEETSFEFSPSLTPELNEFP-MPSLDVITPQAYL 76
Query: 89 TGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
T + +N A+ F ++P + + + G ++ +EA+ + ++
Sbjct: 77 TPL-GSQSINHAK--FLQIPWRQFVFTKPL--GLSKSTKLDEAVTLIENSSSSPSNLSTP 131
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLI-SKTGFQENTRVVSALINMYSKCGELHIARKIFD 207
+ +L AC SL G +I LI + + N +++S LI ++S C L +ARKIFD
Sbjct: 132 EAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFD 191
Query: 208 D----GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
D LL ++ W M Y+ +G +A+ ++ M + + + L AC
Sbjct: 192 DVTDSSLLTEK---VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWG 323
+ G +++K R +V + Y L+ L +G +A + +G+ + ++ W
Sbjct: 249 LKDLRVGRGIHAQIVK-RKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSER-NVVTWN 306
Query: 324 PLLA 327
L++
Sbjct: 307 SLIS 310
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 230/413 (55%), Gaps = 44/413 (10%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------PE 78
+V+ K GR+D+AR +FDRM R+V++W MI GY ++ ++ ALEL M P
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 79 ---------------------------------RDMASWNAMLTGFFQNGELNRAEKLFA 105
D+ ++++ + + ++ ++F+
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS 378
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ W++++ G Q+ L +AL +F +M+ ++PN T ++L A + LA L
Sbjct: 379 GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED-VEPNIATLNSLLPAYAALADLR 437
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL---RQRDLISWNGM 222
+ IH ++KTGF + + L+++YSKCG L A KIF+ G+ + +D++ W +
Sbjct: 438 QAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN-GIQEKHKSKDVVLWGAL 496
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
I+ Y HG G+ A+ +F +M G N++T+ L ACSH+GLV+EG+ F +L++
Sbjct: 497 ISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYK 556
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVA 342
+ +HY C+VDL GRAGRL EA+ +I + + + +VWG LLA C H N +G++ A
Sbjct: 557 TLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAA 616
Query: 343 KKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
K+ ++E EN G Y LL+N+YA++G+WK+ VR M++ GL+K+PG S IE+
Sbjct: 617 NKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 184/408 (45%), Gaps = 55/408 (13%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------ 76
+T+ A G I AR LF+ MP +++S+N +I Y + +A+ +F RM
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 77 --PE-------------------------RDMASW--------NAMLTGFFQNGELNRAE 101
P+ R + SW NA+L + G++ A
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 102 KLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGL 161
+F + +DVI+W +M++GY ++G +AL MF M N + ++ T V++L C L
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM-VNESVDLDHATIVSMLPVCGHL 231
Query: 162 ASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
L G+ +H+L+ + + V +AL+NMY KCG + AR +FD + +RD+I+W
Sbjct: 232 KDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR--MERRDVITWTC 289
Query: 222 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNR 281
MI Y G A+ L MQ G + N VT L++ C A V++G K L
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG-----KCLHGW 344
Query: 282 SI--QVKEDHY--ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADI 337
++ QV D L+ + + R+ F + G K W ++AGC +
Sbjct: 345 AVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSG-ASKYHTGPWSAIIAGCVQNELVSD 403
Query: 338 GKLVAKKILKVEHE-NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+ K++ + + E N T + L YA++ ++A N+ + G
Sbjct: 404 ALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGF 451
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 50/266 (18%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
A Q D+ T+++ AK R+D +F + W+A+I G QN + +A
Sbjct: 345 AVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDA 404
Query: 70 LELFERMPERD----MASWNAML---------------------TGFFQN---------- 94
L LF+RM D +A+ N++L TGF +
Sbjct: 405 LGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHV 464
Query: 95 ----GELNRAEKLFAELPQ----KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
G L A K+F + + KDV+ W ++++GY HG AL++F +M G+ P
Sbjct: 465 YSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM-VRSGVTP 523
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLI---SKTGFQENTRVVSALINMYSKCGELHIAR 203
N TF + L ACS + EG + + + KT + N + ++++ + G L A
Sbjct: 524 NEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNH--YTCIVDLLGRAGRLDEAY 581
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHH 229
+ + W ++AA H
Sbjct: 582 NLITTIPFEPTSTV-WGALLAACVTH 606
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 241/441 (54%), Gaps = 42/441 (9%)
Query: 33 GRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER------------- 79
G + DA +F+ MP +VV W+ MI + QN +EA++LF RM E
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 80 --------------------------DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
D+ NA++ + + +++ A KLFAEL K+ +
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEV 415
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
+W +++ GY G +A MF + N + TF + LGAC+ LAS+ G Q+H L
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREALRNQ-VSVTEVTFSSALGACASLASMDLGVQVHGL 474
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
KT + V ++LI+MY+KCG++ A+ +F++ + D+ SWN +I+ Y+ HG G
Sbjct: 475 AIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNE--METIDVASWNALISGYSTHGLGR 532
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
+A+ + + M++ + N +T++ +L+ CS+AGL+D+G + F+ ++++ I+ +HY C+
Sbjct: 533 QALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCM 592
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENA 353
V L GR+G+L +A +IEG+ + S+ +W +L+ N + + A++ILK+ ++
Sbjct: 593 VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDE 652
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSE 413
TY L+SNMYA +W A++R MK+ G+KK+PG SWIE V F VG H +
Sbjct: 653 ATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMK 712
Query: 414 MLEYLLLGLHTKMKKFGDILD 434
++ +L L+ K + G + D
Sbjct: 713 LINGMLEWLNMKATRAGYVPD 733
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 167/355 (47%), Gaps = 54/355 (15%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA 82
+++ + G +D AR +F+ + +++V W +++ Y +N +++L+L M
Sbjct: 185 AALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM 244
Query: 83 SWN---------------------------------------AMLTGFFQNGELNRAEKL 103
N +L + Q G+++ A K+
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL-----GAC 158
F E+P+ DV+ W+ M+ + Q+G EA+ +F +M+ + PN T ++L G C
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR-EAFVVPNEFTLSSILNGCAIGKC 363
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
SGL G+Q+H L+ K GF + V +ALI++Y+KC ++ A K+F + L ++ +S
Sbjct: 364 SGL-----GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE--LSSKNEVS 416
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
WN +I Y + G G +A ++F + +VT+ L AC+ +D G+Q +
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
K + + K L+D+ + G +K A + + + ++ W L++G + HG
Sbjct: 477 KTNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTHG 529
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 160/348 (45%), Gaps = 44/348 (12%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYA---------------- 61
D+ + +++ K+G DA LFD MP RN VS+ + GYA
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH 142
Query: 62 --QNRRLDEALELFERMPERDMASW-----------------NAMLTGFFQNGELNRAEK 102
L+LF + + ++ W A++ + G ++ A
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
+F + KD++ W +++ Y ++G E++LK+ + M+ G PNN TF T L A GL
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRM-AGFMPNNYTFDTALKASIGLG 261
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
+ + +H I KT + + RV L+ +Y++ G++ A K+F++ + + D++ W+ M
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNE--MPKNDVVPWSFM 319
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
IA + +G+ NEA++LF +M+E N+ T +L C+ G Q ++K
Sbjct: 320 IARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK--- 376
Query: 283 IQVKEDHYA--CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ D Y L+D+ + ++ A + L K +S W ++ G
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS-WNTVIVG 423
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDE 68
+A + V+ +++D AK G I A+++F+ M +V SWNA+I+GY+ + +
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQ 533
Query: 69 ALELFERMPERDMA----SWNAMLTGFFQNGELNRAEKLFAELPQKDVIT-----WTSMM 119
AL + + M +RD ++ +L+G G +++ ++ F + + I +T M+
Sbjct: 534 ALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMV 593
Query: 120 TGYAQHGLSEEALKMF 135
+ G ++A+K+
Sbjct: 594 RLLGRSGQLDKAMKLI 609
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 238/451 (52%), Gaps = 47/451 (10%)
Query: 1 MWEDRGCTM----AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAM 56
M+ + GC F + +R+ + +++ GL G I+DA LF M ++ VSW AM
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAM 241
Query: 57 ITGYAQNRRLDEALELFERMP----ERDMASWNAMLT-----GFFQNGE----------- 96
I G AQN EA+E F M + D + ++L G G+
Sbjct: 242 IKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF 301
Query: 97 -------------------LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTK 137
L+ A+ +F + QK+V++WT+M+ GY Q G +EEA+K+F
Sbjct: 302 QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLD 361
Query: 138 MQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCG 197
MQ G+ P++ T + AC+ ++SL EG Q H +G V ++L+ +Y KCG
Sbjct: 362 MQ-RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 198 ELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
++ + ++F++ + RD +SW M++AYA G E I LF+KM + G + + VT +
Sbjct: 421 DIDDSTRLFNE--MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV 478
Query: 258 LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKL 317
++ACS AGLV++G +YF + I HY+C++DL R+GRL+EA I G+
Sbjct: 479 ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP 538
Query: 318 SLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRM 377
W LL+ C GN +IGK A+ +++++ + Y+LLS++YAS GKW A +R
Sbjct: 539 DAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRR 598
Query: 378 KMKDKGLKKQPGCSWIEVGNTVQVFVVGDKS 408
M++K +KK+PG SWI+ + F D+S
Sbjct: 599 GMREKNVKKEPGQSWIKWKGKLHSFSADDES 629
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 36/323 (11%)
Query: 45 MPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLF 104
+P +N ++ YA + A +F+R+P+ ++ SWN +L + + G ++ E F
Sbjct: 36 LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 105 AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
+LP +D +TW ++ GY+ GL A+K + M + T +T+L S +
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 165 TEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF---DD-----------GL 210
+ G+QIH + K GF+ V S L+ MY+ G + A+K+F DD GL
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 211 LR--------------QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVE 256
L ++D +SW MI A +G EAI F +M+ G + + +
Sbjct: 216 LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 257 LLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY---ACLVDLCGRAGRLKEAFYIIEGL 313
+L AC G ++EG Q +++ +DH + L+D+ + L A + + +
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNF----QDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331
Query: 314 GVKLSLSVWGPLLAGCNVHGNAD 336
K +S W ++ G G A+
Sbjct: 332 KQKNVVS-WTAMVVGYGQTGRAE 353
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 255 bits (651), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/425 (32%), Positives = 237/425 (55%), Gaps = 12/425 (2%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQNRRL 66
F+Q++ D +SW ++ GLA +G D+A ++F +M + + +S +++ + L
Sbjct: 328 FDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMAL 387
Query: 67 DEALELFERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQK-DVITWTSMMTG 121
+ +++ + + D+ N++LT + +L LF + D ++W +++T
Sbjct: 388 SQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTA 447
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
QH E L++F K+ +P++ T +L C ++SL G Q+H KTG
Sbjct: 448 CLQHEQPVEMLRLF-KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP 506
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ + LI+MY+KCG L AR+IFD + RD++SW+ +I YA G+G EA+ LF +
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDS--MDNRDVVSWSTLIVGYAQSGFGEEALILFKE 564
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAG 301
M+ G + N VT+V +LTACSH GLV+EG++ + + I ++H +C+VDL RAG
Sbjct: 565 MKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAG 624
Query: 302 RLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSN 361
RL EA I+ + ++ + VW LL+ C GN + + A+ ILK++ N+ + LL +
Sbjct: 625 RLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCS 684
Query: 362 MYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLG 421
M+AS G W+ AA +R MK +KK PG SWIE+ + + +F D H + + + +L
Sbjct: 685 MHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHN 744
Query: 422 LHTKM 426
+ ++M
Sbjct: 745 IWSQM 749
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 151/288 (52%), Gaps = 41/288 (14%)
Query: 31 KSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA-------- 82
K G + DAR +FD MP RN+VS+ ++ITGY+QN + EA+ L+ +M + D+
Sbjct: 114 KCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGS 173
Query: 83 -------------------------------SWNAMLTGFFQNGELNRAEKLFAELPQKD 111
+ NA++ + + +++ A ++F +P KD
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKD 233
Query: 112 VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIH 171
+I+W+S++ G++Q G EAL +M + G PN F + L ACS L G QIH
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 172 QLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGY 231
L K+ N +L +MY++CG L+ AR++FD + + D SWN +IA A++GY
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQ--IERPDTASWNVIIAGLANNGY 351
Query: 232 GNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
+EA+++F++M+ GF + ++ LL A + + +G+Q ++K
Sbjct: 352 ADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK 399
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 159/324 (49%), Gaps = 21/324 (6%)
Query: 26 VDGLAKSGRIDDARALFD--------RMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
++ L KS +A FD ++ LR +S +I + +R L + ++ + +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYIS---LICACSSSRSLAQGRKIHDHIL 94
Query: 77 ---PERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALK 133
+ D N +L+ + + G L A ++F +P+++++++TS++TGY+Q+G EA++
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 134 MFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMY 193
++ KM L P+ F +++ AC+ + + G+Q+H + K + +ALI MY
Sbjct: 155 LYLKM-LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY 213
Query: 194 SKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQANDV 252
+ ++ A ++F + +DLISW+ +IA ++ G+ EA++ +M G F N+
Sbjct: 214 VRFNQMSDASRVFYG--IPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 271
Query: 253 TYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEG 312
+ L ACS D G Q +K+ + L D+ R G L A + +
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSE-LAGNAIAGCSLCDMYARCGFLNSARRVFDQ 330
Query: 313 LGVKLSLSVWGPLLAGCNVHGNAD 336
+ + + W ++AG +G AD
Sbjct: 331 IE-RPDTASWNVIIAGLANNGYAD 353
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 240/446 (53%), Gaps = 43/446 (9%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNR----RLDEALE--------- 71
V AK G + A+ +F + + V SWNA+I G+AQ+ LD L+
Sbjct: 436 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Query: 72 --------------------------LFERMPERDMASWNAMLTGFFQNGELNRAEKLFA 105
+ ERD+ + ++L+ + GEL + LF
Sbjct: 496 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ K +++W +++TGY Q+G + AL +F +M G ++ + + V GACS L SL
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG-IQLCGISMMPVFGACSLLPSLR 614
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G++ H K +++ + +LI+MY+K G + + K+F+ L+++ SWN MI
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNG--LKEKSTASWNAMIMG 672
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
Y HG EAI LF +MQ G +D+T++ +LTAC+H+GL+ EG++Y D++ + ++
Sbjct: 673 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 732
Query: 286 KEDHYACLVDLCGRAGRLKEAFYII-EGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKK 344
HYAC++D+ GRAG+L +A ++ E + + + +W LL+ C +H N ++G+ VA K
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792
Query: 345 ILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVV 404
+ ++E E Y LLSN+YA +GKW++ VR +M + L+K GCSWIE+ V FVV
Sbjct: 793 LFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVV 852
Query: 405 GDKSHSQSEMLEYLLLGLHTKMKKFG 430
G++ E ++ L L K+ K G
Sbjct: 853 GERFLDGFEEIKSLWSILEMKISKMG 878
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 158/351 (45%), Gaps = 49/351 (13%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------ 76
T ++ A G DD+R +FD + +N+ WNA+I+ Y++N DE LE F M
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 77 -PER---------------------------------DMASWNAMLTGFFQNGELNRAEK 102
P+ D+ NA+++ + +G + A +
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM---QANGGLKPNNGTFVTVLGACS 159
LF +P++++++W SM+ ++ +G SEE+ + +M +G P+ T VTVL C+
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 160 GLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISW 219
+ G+ +H K + + +AL++MYSKCG + A+ IF + ++++SW
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK--MNNNKNVVSW 361
Query: 220 NGMIAAYAHHGYGNEAINLFNKMQELG--FQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
N M+ ++ G + ++ +M G +A++VT + + C H + +
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 278 LKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
LK + E V + G L A + G+ K +++ W L+ G
Sbjct: 422 LKQEFVY-NELVANAFVASYAKCGSLSYAQRVFHGIRSK-TVNSWNALIGG 470
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 181/443 (40%), Gaps = 82/443 (18%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM--------------PLRNVVSWNAM 56
F+ M ER++ SW +M+ + +G +++ L M L V+ A
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Query: 57 ---------ITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAEL 107
+ G+A RLD+ L L NA++ + + G + A+ +F
Sbjct: 305 EREIGLGKGVHGWAVKLRLDKELVLN-----------NALMDMYSKCGCITNAQMIFKMN 353
Query: 108 PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG-GLKPNNGTFVTVLGACSGLASLTE 166
K+V++W +M+ G++ G + + +M A G +K + T + + C + L
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAY 226
+++H K F N V +A + Y+KCG L A+++F +R + + SWN +I +
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHG--IRSKTVNSWNALIGGH 471
Query: 227 AHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVK 286
A +++ +M+ G + T LL+ACS + G + +++N ++
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN---WLE 528
Query: 287 EDHYACLVDL-----CGRAGRLKEAFYIIE----------------------GLGVKLSL 319
D + L L CG ++ F +E LGV +
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 320 SVWG---------PLLAGCNVHGNADIGKLVAKKILK-VEHENAGTYSLLSNMYASVGKW 369
++G P+ C++ + +G+ LK + ++A L +MYA G
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 648
Query: 370 KEAANVRMKMKDKGLKKQPGCSW 392
+++ V GLK++ SW
Sbjct: 649 TQSSKVF-----NGLKEKSTASW 666
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 167 GQQIHQLIS-KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G++IHQL+S T + + + + +I MY+ CG +R +FD LR ++L WN +I++
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA--LRSKNLFQWNAVISS 160
Query: 226 YAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGI 271
Y+ + +E + F +M + TY ++ AC AG+ D GI
Sbjct: 161 YSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVGI 205
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 241/467 (51%), Gaps = 77/467 (16%)
Query: 6 GCTMAFNQMQERDVSSWTTMVDGLA----------------------------------- 30
G + F +M E +V SW M+ G
Sbjct: 302 GAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACF 361
Query: 31 KSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP----ERDMASWNA 86
+SG ++ R +F +P +V +WNAM++GY+ +EA+ F +M + D + +
Sbjct: 362 RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSV 421
Query: 87 MLTG-----FFQNGE------------------------------LNRAEKLFAE-LPQK 110
+L+ F + G+ + +E +F + + +
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481
Query: 111 DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQI 170
D+ W SM++G+ + L +AL +F +M L PN +F TVL +CS L SL G+Q
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 171 HQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
H L+ K+G+ ++ V +AL +MY KCGE+ AR+ FD +LR+ +I WN MI Y H+G
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD-AVLRKNTVI-WNEMIHGYGHNG 599
Query: 231 YGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
G+EA+ L+ KM G + + +T+V +LTACSH+GLV+ G++ + + I+ + DHY
Sbjct: 600 RGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHY 659
Query: 291 ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH 350
C+VD GRAGRL++A + E K S +W LL+ C VHG+ + + VA+K+++++
Sbjct: 660 ICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDP 719
Query: 351 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGN 397
+++ Y LLSN Y+S+ +W ++A ++ M + K PG SW GN
Sbjct: 720 QSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGN 766
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 172/318 (54%), Gaps = 9/318 (2%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER---- 79
++++ AK+ ++ A +F MP NVVSWN MI G+ Q R D+++E RM +
Sbjct: 289 SLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
+ + ++L F++G++ ++F+ +PQ V W +M++GY+ + EEA+ F +MQ
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
LKP+ T +L +C+ L L G+QIH ++ +T +N+ +VS LI +YS+C ++
Sbjct: 409 FQ-NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQANDVTYVELL 258
I+ IFDD + + D+ WN MI+ + H+ +A+ LF +M + N+ ++ +L
Sbjct: 468 EISECIFDD-CINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLS 318
++CS + G Q+ ++K+ + A L D+ + G + A + + ++ +
Sbjct: 527 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSARQFFDAV-LRKN 584
Query: 319 LSVWGPLLAGCNVHGNAD 336
+W ++ G +G D
Sbjct: 585 TVIWNEMIHGYGHNGRGD 602
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 114/207 (55%), Gaps = 4/207 (1%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N ++ Y + D A ++F+ M RD+ SWNA LT + G+L A ++F +P++DV+
Sbjct: 45 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
+W +M++ + G E+AL ++ +M +G L P+ T +VL ACS + G + H +
Sbjct: 105 SWNNMISVLVRKGFEEKALVVYKRMVCDGFL-PSRFTLASVLSACSKVLDGVFGMRCHGV 163
Query: 174 ISKTGFQENTRVVSALINMYSKCGEL-HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
KTG +N V +AL++MY+KCG + ++F+ L Q + +S+ +I A
Sbjct: 164 AVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES--LSQPNEVSYTAVIGGLARENKV 221
Query: 233 NEAINLFNKMQELGFQANDVTYVELLT 259
EA+ +F M E G Q + V +L+
Sbjct: 222 LEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 156/317 (49%), Gaps = 52/317 (16%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F++M RDV SW + K G + +A +FD MP R+VVSWN MI+ + ++A
Sbjct: 63 VFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKA 122
Query: 70 LELFERM------PER---------------------------------DMASWNAMLTG 90
L +++RM P R ++ NA+L+
Sbjct: 123 LVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSM 182
Query: 91 FFQNGEL-NRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
+ + G + + ++F L Q + +++T+++ G A+ EA++MF ++ G++ ++
Sbjct: 183 YAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMF-RLMCEKGVQVDSV 241
Query: 150 TFVTVLGACS---GLASLTE------GQQIHQLISKTGFQENTRVVSALINMYSKCGELH 200
+L + G SL+E G+QIH L + GF + + ++L+ +Y+K +++
Sbjct: 242 CLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMN 301
Query: 201 IARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA 260
A IF + + + +++SWN MI + ++++ +M++ GFQ N+VT + +L A
Sbjct: 302 GAELIFAE--MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA 359
Query: 261 CSHAGLVDEGIQYFDKL 277
C +G V+ G + F +
Sbjct: 360 CFRSGDVETGRRIFSSI 376
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 29/125 (23%)
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR-------------- 212
G+ IH I + G + +T + + L+++Y +CG+ ARK+FD+ +R
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 213 ---------------QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
+RD++SWN MI+ G+ +A+ ++ +M GF + T +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 258 LTACS 262
L+ACS
Sbjct: 145 LSACS 149
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/450 (32%), Positives = 240/450 (53%), Gaps = 42/450 (9%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
++++S ++ K G R +FD M RNV++ A+I+G +N ++ L LF
Sbjct: 187 DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSL 246
Query: 76 M------P---------------------------------ERDMASWNAMLTGFFQNGE 96
M P E ++ +A++ + + G
Sbjct: 247 MRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGS 306
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
+ A +F + D ++ T ++ G AQ+G EEA++ F +M G++ + VLG
Sbjct: 307 IEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRM-LQAGVEIDANVVSAVLG 365
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
SL G+Q+H L+ K F NT V + LINMYSKCG+L ++ +F + +R+
Sbjct: 366 VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRR--MPKRNY 423
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+SWN MIAA+A HG+G A+ L+ +M L + DVT++ LL ACSH GL+D+G + ++
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNE 483
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ + I+ + +HY C++D+ GRAG LKEA I+ L +K +W LL C+ HG+ +
Sbjct: 484 MKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
Query: 337 IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVG 396
+G+ A+++ + +++ + L++N+Y+S GKWKE A +MK G+ K+ G S IE+
Sbjct: 544 VGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Query: 397 NTVQVFVVGDKSHSQSEMLEYLLLGLHTKM 426
+ FVV DK H Q+E + +L GL M
Sbjct: 604 HKTHSFVVEDKLHPQAEAIYDVLSGLFPVM 633
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 43/274 (15%)
Query: 22 WTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM----- 76
W +++ AK G++ DA LFD MP+R+V+S N + G+ +NR + L +RM
Sbjct: 93 WNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGG 152
Query: 77 ---------------PE------------------RDMASWNAMLTGFFQNGELNRAEKL 103
PE ++++ N ++T +F+ G +
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F + ++VIT T++++G ++ L E+ L++F+ M+ G + PN+ T+++ L ACSG
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMR-RGLVHPNSVTYLSALAACSGSQR 271
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
+ EGQQIH L+ K G + + SAL++MYSKCG + A IF+ + D +S ++
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFEST--TEVDEVSMTVIL 329
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQ--ANDVTYV 255
A +G EAI F +M + G + AN V+ V
Sbjct: 330 VGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV 363
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 211/371 (56%), Gaps = 34/371 (9%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA 82
T +VD KSG+++ AR +F+ M NVV +MI+GY +++A E+F +D+
Sbjct: 179 TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIV 238
Query: 83 SWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
+NAM+ GF ++GE ++ ++ M+ MQ
Sbjct: 239 VYNAMVEGFSRSGE------------------------------TAKRSVDMYISMQ-RA 267
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA 202
G PN TF +V+GACS L S GQQ+H I K+G + ++ S+L++MY+KCG ++ A
Sbjct: 268 GFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDA 327
Query: 203 RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
R++FD ++++++ SW MI Y +G EA+ LF +M+E + N VT++ L+ACS
Sbjct: 328 RRVFDQ--MQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACS 385
Query: 263 HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
H+GLVD+G + F+ + ++ S++ K +HYAC+VDL GRAG L +AF + + +W
Sbjct: 386 HSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIW 445
Query: 323 GPLLAGCNVHGNADIGKLVAKKILKVEHEN-AGTYSLLSNMYASVGKWKEAANVRMKMKD 381
LL+ CN+HGN ++ + A ++ K+ + G Y LSN+YAS KW + +R MK
Sbjct: 446 AALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKR 505
Query: 382 KGLKKQPGCSW 392
+ + K G SW
Sbjct: 506 RRISKTIGRSW 516
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 38/277 (13%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G L+ A ++F ELP+ + + M++GY +HGL +E L + +M +G K + T V
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGE-KADGYTLSMV 141
Query: 155 LGACSGLASL-----TEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD-- 207
L A + S + + +H I K + + +++AL++ Y K G+L AR +F+
Sbjct: 142 LKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
Query: 208 ------------DGLLRQ---------------RDLISWNGMIAAYAHHG-YGNEAINLF 239
G + Q +D++ +N M+ ++ G +++++
Sbjct: 202 KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMY 261
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGR 299
MQ GF N T+ ++ ACS + G Q +++K+ + + L+D+ +
Sbjct: 262 ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAK 320
Query: 300 AGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
G + +A + + + K S W ++ G +GN +
Sbjct: 321 CGGINDARRVFDQMQEKNVFS-WTSMIDGYGKNGNPE 356
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 117/233 (50%), Gaps = 18/233 (7%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSG----RIDDARALFDRMPLRNVVSWNAMITGYAQNRRL 66
FN + +D+ + MV+G ++SG R D R +S A + G +
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACS---V 285
Query: 67 DEALELFERMPERDMAS--------WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSM 118
+ E+ +++ + M S +++L + + G +N A ++F ++ +K+V +WTSM
Sbjct: 286 LTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSM 345
Query: 119 MTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT- 177
+ GY ++G EEAL++FT+M+ ++PN TF+ L ACS + +G +I + + +
Sbjct: 346 IDGYGKNGNPEEALELFTRMK-EFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDY 404
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
+ + ++++ + G+L+ A + F + + D W ++++ HG
Sbjct: 405 SMKPKMEHYACIVDLMGRAGDLNKAFE-FARAMPERPDSDIWAALLSSCNLHG 456
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 12/132 (9%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP-LR---NVVSWNAMITGYAQNRRL 66
F+QMQE++V SWT+M+DG K+G ++A LF RM R N V++ ++ + + +
Sbjct: 331 FDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLV 390
Query: 67 DEALELFERMPERD------MASWNAMLTGFFQNGELNRAEKLFAELPQK-DVITWTSMM 119
D+ E+FE M +RD M + ++ + G+LN+A + +P++ D W +++
Sbjct: 391 DKGYEIFESM-QRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALL 449
Query: 120 TGYAQHGLSEEA 131
+ HG E A
Sbjct: 450 SSCNLHGNVELA 461
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAY 226
G++IH I KTGFQ + + L+ ++ KCG L AR++FD+ L + L ++N MI+ Y
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDE--LPKPTLSAYNYMISGY 110
Query: 227 AHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNR----S 282
HG E + L +M G +A+ T +L A + G + +L+ R
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGL 313
+++ + LVD ++G+L+ A + E +
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETM 201
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 235/396 (59%), Gaps = 12/396 (3%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPE-RDMA 82
++V A SG I A++L + ++ S N +I Y +N L+ A LFER+ D
Sbjct: 344 SLVHMYASSGLIASAQSLLNES--FDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKV 401
Query: 83 SWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
SW +M+ G+ + G+++RA LF +L KD +TWT M++G Q+ L EA + + M
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDM-VRC 460
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG--FQENTRVVSALINMYSKCGELH 200
GLKP N T+ +L + ++L +G+ IH +I+KT + + + ++L++MY+KCG +
Sbjct: 461 GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 201 IARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA 260
A +IF + Q+D +SWN MI +HHG ++A+NLF +M + G + N VT++ +L+A
Sbjct: 521 DAYEIFAK--MVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Query: 261 CSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLS 320
CSH+GL+ G++ F + + SIQ DHY ++DL GRAG+LKEA I L +
Sbjct: 579 CSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHT 638
Query: 321 VWGPLLAGCNVH---GNAD-IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVR 376
V+G LL C ++ +A+ I + A ++L+++ NA + L N+YA +G+ +R
Sbjct: 639 VYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMR 698
Query: 377 MKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQS 412
+M KG+KK PGCSW+ V VF+ GDKS S++
Sbjct: 699 KEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEA 734
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 204/385 (52%), Gaps = 26/385 (6%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M ER+V SW T+V GL ++G ++ A+ +FD MP R+VVSWNAMI GY +N ++EA
Sbjct: 161 FDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAK 220
Query: 71 ELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEE 130
LF M E+++ +W +M+ G+ + G++ A +LF E+P++++++WT+M++G+A + L E
Sbjct: 221 LLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE 280
Query: 131 ALKMFTKMQAN-GGLKPNNGTFVTVLGACSGLASLTE--GQQIHQLISKTGFQ---ENTR 184
AL +F +M+ + + PN T +++ AC GL G+Q+H + G++ + R
Sbjct: 281 ALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGR 340
Query: 185 VVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE 244
+ +L++MY+ G + A+ + ++ DL S N +I Y +G A LF +++
Sbjct: 341 LAKSLVHMYASSGLIASAQSLLNESF----DLQSCNIIINRYLKNGDLERAETLFERVKS 396
Query: 245 LGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLK 304
L + V++ ++ AG V F KL + + ++ +
Sbjct: 397 L---HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WTVMISGLVQNELFA 448
Query: 305 EAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIGK----LVAKKILKVEHENAGTYS 357
EA ++ + G+K S + LL+ N D GK ++AK + + S
Sbjct: 449 EAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNS 508
Query: 358 LLSNMYASVGKWKEAANVRMKMKDK 382
L+S MYA G ++A + KM K
Sbjct: 509 LVS-MYAKCGAIEDAYEIFAKMVQK 532
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 189/394 (47%), Gaps = 35/394 (8%)
Query: 33 GRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAML 88
G + AR L D++P R VV W ++++ YA+ LDEA LFE MPER++ + NAML
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 89 TGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
TG+ + +N A LF E+P K+V++WT M+T G SE+A+++F +M + N
Sbjct: 116 TGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN- 173
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVS--ALINMYSKCGELHIARKIF 206
T VT GL + ++ Q+ ++ VVS A+I Y + + A+ +F
Sbjct: 174 -TLVT------GLIRNGDMEKAKQVFDAMPSRD---VVSWNAMIKGYIENDGMEEAKLLF 223
Query: 207 DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGL 266
D + ++++++W M+ Y +G EA LF +M E N V++ +++ + L
Sbjct: 224 GD--MSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE----RNIVSWTAMISGFAWNEL 277
Query: 267 VDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYII-EGLGVKLSLSVWGPL 325
E + F ++ K+ + + L+ L G L F + E L ++ + W +
Sbjct: 278 YREALMLFLEMKKD--VDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETV 335
Query: 326 -----LAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
LA VH A G + + + L E + + +++ N Y G + A + ++K
Sbjct: 336 DHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVK 395
Query: 381 ---DKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQ 411
DK ++E G+ + F + K H +
Sbjct: 396 SLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK 429
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 21/340 (6%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDE 68
+ F M E++V +WT+MV G + G + +A LF MP RN+VSW AMI+G+A N E
Sbjct: 221 LLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE 280
Query: 69 ALELFERM-PERDMASWN--AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQH 125
AL LF M + D S N +++ + G L + E VI+ G+
Sbjct: 281 ALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVIS-----NGWETV 335
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTV---LGACSGLAS--LTEG--QQIHQLISKTG 178
K M A+ GL + + + L +C+ + + L G ++ L +
Sbjct: 336 DHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVK 395
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
+ +++I+ Y + G++ A +F L +D ++W MI+ + EA +L
Sbjct: 396 SLHDKVSWTSMIDGYLEAGDVSRAFGLFQK--LHDKDGVTWTVMISGLVQNELFAEAASL 453
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA--CLVDL 296
+ M G + + TY LL++ +D+G ++ ++ + D LV +
Sbjct: 454 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG-KHIHCVIAKTTACYDPDLILQNSLVSM 512
Query: 297 CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ G +++A+ I + K ++S W ++ G + HG AD
Sbjct: 513 YAKCGAIEDAYEIFAKMVQKDTVS-WNSMIMGLSHHGLAD 551
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 219/366 (59%), Gaps = 1/366 (0%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N +I Y R A +LF+ MP +++ +WN++L + ++G++ A +F E+ ++DV+
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
TW+SM+ GY + G +AL++F +M G K N T V+V+ AC+ L +L G+ +H+
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
I + ++LI+MY+KCG + A +F +++ D + WN +I A HG+
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 326
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
E++ LF+KM+E +++T++ LL ACSH GLV E +F K LK + K +HYAC+
Sbjct: 327 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFF-KSLKESGAEPKSEHYACM 385
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENA 353
VD+ RAG +K+A I + +K + S+ G LL GC HGN ++ + V KK+++++ N
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSE 413
G Y L+N+YA +++ A ++R M+ KG+KK G S +++ T F+ DK+H S+
Sbjct: 446 GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSD 505
Query: 414 MLEYLL 419
+ +L
Sbjct: 506 KIYAVL 511
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 108/229 (47%), Gaps = 43/229 (18%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M +++ +W +++D AKSG + AR +FD M R+VV+W++MI GY + ++AL
Sbjct: 166 FDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKAL 225
Query: 71 ELFERMPERDMASWN-----AMLTGFFQNGELNRAEKLF--------------------- 104
E+F++M + N +++ G LNR + +
Sbjct: 226 EIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDM 285
Query: 105 ----------------AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
A + + D + W +++ G A HG E+L++F KM+ + P+
Sbjct: 286 YAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMR-ESKIDPDE 344
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCG 197
TF+ +L ACS + E + + ++G + + + ++++ S+ G
Sbjct: 345 ITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAG 393
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 134/287 (46%), Gaps = 33/287 (11%)
Query: 78 ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTK 137
E S + +G+++ A K ++L W ++ G++ E+++ ++ +
Sbjct: 39 EEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQ 98
Query: 138 MQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCG 197
M GL P++ T+ ++ + S L++ G +H + K+G + + + + LI+MY
Sbjct: 99 M-LRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFR 157
Query: 198 ELHIARKIFDD-----------------------------GLLRQRDLISWNGMIAAYAH 228
+ ARK+FD+ + +RD+++W+ MI Y
Sbjct: 158 DQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVK 217
Query: 229 HGYGNEAINLFNKMQELG-FQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKE 287
G N+A+ +F++M +G +AN+VT V ++ AC+H G ++ G + + + + + +
Sbjct: 218 RGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG-KTVHRYILDVHLPLTV 276
Query: 288 DHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSV-WGPLLAGCNVHG 333
L+D+ + G + +A+ + VK + ++ W ++ G HG
Sbjct: 277 ILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/376 (35%), Positives = 219/376 (58%), Gaps = 5/376 (1%)
Query: 54 NAMITGYAQNRRLDEALELFERMPER-DMASWNAMLTGFFQNGELNRAEKLFAELPQKDV 112
NA++ YA+ ++ A ++F + ER + S+N++L+G+ +G + A+ LF E+ D+
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
TW+ M+ YA+ EA+ +F ++QA G ++PN T + +L C+ LASL +Q H
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARG-MRPNTVTIMNLLPVCAQLASLHLVRQCHG 592
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
I + G + R+ L+++Y+KCG L A +F +RDL+ + M+A YA HG G
Sbjct: 593 YIIRGGLGD-IRLKGTLLDVYAKCGSLKHAYSVFQSD--ARRDLVMFTAMVAGYAVHGRG 649
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC 292
EA+ +++ M E + + V +LTAC HAGL+ +G+Q +D + ++ + YAC
Sbjct: 650 KEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYAC 709
Query: 293 LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHEN 352
VDL R GRL +A+ + + V+ + ++WG LL C + D+G VA +L+ E ++
Sbjct: 710 AVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDD 769
Query: 353 AGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQS 412
G + L+SNMYA+ KW+ +R MK K +KK GCSW+EV VFV GD SH +
Sbjct: 770 TGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRR 829
Query: 413 EMLEYLLLGLHTKMKK 428
+ + L+ L+ +MK+
Sbjct: 830 DSIFDLVNALYLQMKE 845
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 194/418 (46%), Gaps = 52/418 (12%)
Query: 16 ERDVSSWTTMVDGLAKSGRI-DDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFE 74
E+D +V AK G I DA FD + ++VVSWNA+I G+++N + +A F
Sbjct: 154 EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFC 213
Query: 75 RM----------------P-----ERDMA--------------SW--------NAMLTGF 91
M P ++++A SW N++++ +
Sbjct: 214 LMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFY 273
Query: 92 FQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
+ G + A LF + KD+++W ++ GYA + +A ++F + G + P++ T
Sbjct: 274 LRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTI 333
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGF-QENTRVVSALINMYSKCGELHIARKIFDDGL 210
+++L C+ L L G++IH I + + E+T V +ALI+ Y++ G+ A F L
Sbjct: 334 ISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAF--SL 391
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
+ +D+ISWN ++ A+A + +NL + + + VT + LL C + + +
Sbjct: 392 MSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV 451
Query: 271 IQYFDKLLKNRSIQVKEDHYA--CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ +K + +E+ L+D + G ++ A I GL + +L + LL+G
Sbjct: 452 KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
Query: 329 CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
G+ D +++ ++ + T+SL+ +YA EA V +++ +G++
Sbjct: 512 YVNSGSHDDAQML---FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRP 566
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 169/387 (43%), Gaps = 84/387 (21%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER---- 79
++V + GRI++A +LF RM +++VSWN +I GYA N +A +LF + +
Sbjct: 268 SLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVS 327
Query: 80 -----------------DMASW--------------------NAMLTGFFQNGELNRAEK 102
D+AS NA+++ + + G+ + A
Sbjct: 328 PDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYW 387
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
F+ + KD+I+W +++ +A + N + ++ T +++L C +
Sbjct: 388 AFSLMSTKDIISWNAILDAFADSP-KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQ 446
Query: 163 SLTEGQQIHQLISKTGF---QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISW 219
+ + +++H K G +E ++ +AL++ Y+KCG + A KIF GL +R L+S+
Sbjct: 447 GIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIF-LGLSERRTLVSY 505
Query: 220 NGMIAAYAHHG-------------------------------YGNEAINLFNKMQELGFQ 248
N +++ Y + G NEAI +F ++Q G +
Sbjct: 506 NSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Query: 249 ANDVTYVELLTACSHAGLVDEGIQYFDKLLKN--RSIQVKEDHYACLVDLCGRAGRLKEA 306
N VT + LL C+ + Q +++ I++K L+D+ + G LK A
Sbjct: 566 PNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLK----GTLLDVYAKCGSLKHA 621
Query: 307 FYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ + + + L ++ ++AG VHG
Sbjct: 622 YSVFQS-DARRDLVMFTAMVAGYAVHG 647
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 6/246 (2%)
Query: 86 AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
++L + + ++ +K+F ++ D + W ++TG + E ++ F M K
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPK 119
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKI 205
P++ TF VL C L G+ +H I K G +++T V +AL++MY+K G +
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 206 FDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
DG + +D++SWN +IA ++ + +A F M + + N T +L C+
Sbjct: 180 AFDG-IADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 266 ---LVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
G Q +++ +Q LV R GR++EA + +G K L W
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSW 297
Query: 323 GPLLAG 328
++AG
Sbjct: 298 NVVIAG 303
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA 202
G ++ F+ V+ AC+ ++ LT G+ +H + K G + V +++NMY+KC +
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 203 RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQANDVTYVELLTAC 261
+K+F + D + WN ++ + G E + F M + + VT+ +L C
Sbjct: 76 QKMFRQ--MDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 262 SHAG 265
G
Sbjct: 133 VRLG 136
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/355 (38%), Positives = 221/355 (62%), Gaps = 4/355 (1%)
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
D+ ++++ + + GE+ A K+F E+PQ++V+TW+ MM GYAQ G +EEAL +F K
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF-KEA 208
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
L N+ +F +V+ C+ L G+QIH L K+ F ++ V S+L+++YSKCG
Sbjct: 209 LFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
A ++F++ + ++L WN M+ AYA H + + I LF +M+ G + N +T++ +L
Sbjct: 269 EGAYQVFNE--VPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSL 319
ACSHAGLVDEG YFD++ ++R I+ + HYA LVD+ GRAGRL+EA +I + + +
Sbjct: 327 ACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTE 385
Query: 320 SVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKM 379
SVWG LL C VH N ++ A K+ ++ ++G + LSN YA+ G++++AA R +
Sbjct: 386 SVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLL 445
Query: 380 KDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
+D+G KK+ G SW+E N V F G++ H +S+ + L L +M+K G I D
Sbjct: 446 RDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIAD 500
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 133/248 (53%), Gaps = 6/248 (2%)
Query: 88 LTGFFQNGELN-RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
L F+ +L + + F + PQK TW+S+++ +AQ+ L +L+ KM A G L+P
Sbjct: 56 LINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMA-GNLRP 114
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
++ + +C+ L+ G+ +H L KTG+ + V S+L++MY+KCGE+ ARK+F
Sbjct: 115 DDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMF 174
Query: 207 DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGL 266
D+ + QR++++W+GM+ YA G EA+ LF + ND ++ +++ C+++ L
Sbjct: 175 DE--MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTL 232
Query: 267 VDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLL 326
++ G Q L S + LV L + G + A+ + + VK +L +W +L
Sbjct: 233 LELGRQ-IHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAML 290
Query: 327 AGCNVHGN 334
H +
Sbjct: 291 KAYAQHSH 298
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 149/303 (49%), Gaps = 43/303 (14%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
DV +++VD AK G I AR +FD MP RNVV+W+ M+ GYAQ +EAL LF+
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 78 ERDMA----SWNAMLTGFFQNG--ELNR-------------------------------- 99
++A S++++++ + EL R
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 100 -AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
A ++F E+P K++ W +M+ YAQH +++ +++F +M+ + G+KPN TF+ VL AC
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLS-GMKPNFITFLNVLNAC 328
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
S + EG+ + ++ + + ++L++M + G L A ++ + + + +
Sbjct: 329 SHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV- 387
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
W ++ + H A +K+ ELG ++ + ++ L A + G ++ + KLL
Sbjct: 388 WGALLTSCTVHKNTELAAFAADKVFELGPVSSGM-HISLSNAYAADGRFEDAAKA-RKLL 445
Query: 279 KNR 281
++R
Sbjct: 446 RDR 448
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/430 (33%), Positives = 241/430 (56%), Gaps = 15/430 (3%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYA--QN 63
F M+ERDV SW TM+ ++G D+ L M + + ++ A+++ + +N
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 64 RRLDEALELFERMPERDMASWNAMLTGFFQNGELNR-AEKLF--AELPQKDVITWTSMMT 120
+ + + F N+ L + L R ++KLF + ++D TW SM++
Sbjct: 435 KEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 121 GYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQ 180
GY Q+G +E+ +F KM ++PN T ++L ACS + S+ G+Q+H +
Sbjct: 495 GYTQNGHTEKTFLVFRKMLEQN-IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD 553
Query: 181 ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFN 240
+N V SAL++MYSK G + A +F ++R+ +++ MI Y HG G AI+LF
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQ--TKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 241 KMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRA 300
MQE G + + +T+V +L+ACS++GL+DEG++ F+++ + +IQ +HY C+ D+ GR
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 301 GRLKEAFYIIEGLGVKLSLS-VWGPLLAGCNVHGNADIGKLVAKKILKVEHEN--AGTYS 357
GR+ EA+ ++GLG + +++ +WG LL C +HG ++ + V++++ K + +G
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEV 731
Query: 358 LLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEY 417
LLSNMYA KWK VR M++KGLKK+ G S IE+ V FV D+ H S +
Sbjct: 732 LLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYD 791
Query: 418 LLLGLHTKMK 427
++ GL M+
Sbjct: 792 VIDGLAKDMR 801
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 185/360 (51%), Gaps = 37/360 (10%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFD---RMPLR-NVVSWNAMITGYAQNRR 65
F+ M+ ++V +W T++ K+GR +A F RM ++ + VS+ + + +R
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 66 LDEALELFERMPE------RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
+ +A + M + +D+ ++ ++ + + G++ + ++F ++++ W +M+
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
Y Q+ E++++F + + + + T++ A S L + G+Q H +SK
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
+ +V++L+ MYS+CG +H + +F +R+RD++SWN MI+A+ +G +E + L
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLS--MRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 240 NKMQELGFQANDVTYVELLTACS-----------HAGLVDEGIQYFDKLLKNRSIQVKED 288
+MQ+ GF+ + +T LL+A S HA L+ +GIQ+ E
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF-------------EG 454
Query: 289 HYACLVDLCGRAGRLKEAFYIIEGLG-VKLSLSVWGPLLAGCNVHGNADIGKLVAKKILK 347
+ L+D+ ++G ++ + + EG G + + W +++G +G+ + LV +K+L+
Sbjct: 455 MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 82 ASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
S + L+ Q+G A +LF +P+ + W +++ G+ + L EAL +++M+
Sbjct: 40 PSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKT 99
Query: 142 GGLKPNNG-TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV-SALINMY------ 193
+ T+ + L AC+ +L G+ +H + + Q ++RVV ++L+NMY
Sbjct: 100 APFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRC-LQNSSRVVHNSLMNMYVSCLNA 158
Query: 194 SKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVT 253
C E + RK+FD+ +R++++++WN +I+ Y G EA F M + + + V+
Sbjct: 159 PDCFEYDVVRKVFDN--MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVS 216
Query: 254 YVELLTACSHAGLVDEGIQYFDKLLK 279
+V + A S + + + ++ +LK
Sbjct: 217 FVNVFPAVSISRSIKKANVFYGLMLK 242
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 234/387 (60%), Gaps = 11/387 (2%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
E D ++++D +K G + +AR +F + +++V +NAMI+GYA N + DEAL L +
Sbjct: 149 ESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKD 208
Query: 76 MP----ERDMASWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGL 127
M + D+ +WNA+++GF + ++ + + DV++WTS+++G +
Sbjct: 209 MKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQ 268
Query: 128 SEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVS 187
+E+A F +M +G L PN+ T +T+L AC+ LA + G++IH TG +++ V S
Sbjct: 269 NEKAFDAFKQMLTHG-LYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRS 327
Query: 188 ALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGF 247
AL++MY KCG + A +F ++ +++N MI YA+HG ++A+ LF++M+ G
Sbjct: 328 ALLDMYGKCGFISEAMILFRKT--PKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE 385
Query: 248 QANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAF 307
+ + +T+ +LTACSHAGL D G F + I + +HYAC+VDL GRAG+L EA+
Sbjct: 386 KLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAY 445
Query: 308 YIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVG 367
+I+ + ++ L VWG LLA C HGN ++ ++ AK + ++E EN+G LL+++YA+ G
Sbjct: 446 EMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAG 505
Query: 368 KWKEAANVRMKMKDKGLKKQPGCSWIE 394
W+ ++ +K K ++ G SW+E
Sbjct: 506 SWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 107/177 (60%), Gaps = 3/177 (1%)
Query: 87 MLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
++T + + G++ A K+F E+P++D+ M+ A++G +E+L F +M +G LK
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDG-LKL 115
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
+ ++L A L G+ IH L+ K ++ + +VS+LI+MYSK GE+ ARK+F
Sbjct: 116 DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVF 175
Query: 207 DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
D L ++DL+ +N MI+ YA++ +EA+NL M+ LG + + +T+ L++ SH
Sbjct: 176 SD--LGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD 208
G++V ++ A G+ +H + +G TR+ + L+ Y +CG++ ARK+FD+
Sbjct: 17 GSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDE 76
Query: 209 GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVD 268
+ +RD+ MI A A +GY E+++ F +M + G + + LL A + L+D
Sbjct: 77 --MPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN--LLD 132
Query: 269 EGIQYFDKLLKNRSIQVKEDHYA----CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
+ F K++ ++ + A L+D+ + G + A + LG + L V+
Sbjct: 133 ---REFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ-DLVVFNA 188
Query: 325 LLAGCNVHGNAD 336
+++G + AD
Sbjct: 189 MISGYANNSQAD 200
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 246/463 (53%), Gaps = 51/463 (11%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRL 66
F++M ERD SW +++ A G +A LFD+M +V++WN + G Q
Sbjct: 202 FDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNY 261
Query: 67 DEALELFERMPERDMASW-----------------------------------------N 85
AL L RM R+ + N
Sbjct: 262 VGALGLISRM--RNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRN 319
Query: 86 AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
++T + + +L A +F + + + TW S+++GYAQ SEEA + +M G +
Sbjct: 320 TLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLV-AGFQ 378
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIH-QLISKTGFQENTRVVSALINMYSKCGELHIARK 204
PN+ T ++L C+ +A+L G++ H ++ + F++ T + ++L+++Y+K G++ A++
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+ D L+ +RD +++ +I Y + G G A+ LF +M G + + VT V +L+ACSH+
Sbjct: 439 VSD--LMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHS 496
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
LV EG + F K+ I+ H++C+VDL GRAG L +A II + K S + W
Sbjct: 497 KLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWAT 556
Query: 325 LLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
LL C++HGN IGK A+K+L+++ EN G Y L++NMYA+ G W + A VR M+D G+
Sbjct: 557 LLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGV 616
Query: 385 KKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMK 427
KK PGC+WI+ + +F VGD S ++ LL GL+ MK
Sbjct: 617 KKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 7/257 (2%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAEL----PQ 109
NA+I+ Y + R + A LF+RM ERD SWNA++ + G + A +LF ++ +
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 110 KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
VITW + G Q G AL + ++M+ N + + L ACS + ++ G++
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMR-NFPTSLDPVAMIIGLKACSLIGAIRLGKE 301
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
IH L + + V + LI MYSKC +L A +F + L +WN +I+ YA
Sbjct: 302 IHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQ--TEENSLCTWNSIISGYAQL 359
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH 289
EA +L +M GFQ N +T +L C+ + G ++ +L+ + +
Sbjct: 360 NKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML 419
Query: 290 YACLVDLCGRAGRLKEA 306
+ LVD+ ++G++ A
Sbjct: 420 WNSLVDVYAKSGKIVAA 436
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 88 LTGFFQNGEL-NRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
L F+ L N A+ + + W ++ YA++ L EE + + +M + G++P
Sbjct: 84 LVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRM-VSKGIRP 142
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
+ T+ +VL AC + G+ +H I + ++ + V +ALI+MY + + IAR++F
Sbjct: 143 DAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLF 202
Query: 207 DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
D + +RD +SWN +I YA G +EA LF+KM G + + +T+ + C G
Sbjct: 203 DR--MFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 143/325 (44%), Gaps = 52/325 (16%)
Query: 5 RGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGY 60
R + F Q +E + +W +++ G A+ + ++A L M + N ++ +++
Sbjct: 332 RHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLC 391
Query: 61 AQNRRLDEALE----LFERMPERDMAS-WNAMLTGFFQNGELNRAEKLFAELPQKDVITW 115
A+ L E + R +D WN+++ + ++G++ A+++ + ++D +T+
Sbjct: 392 ARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTY 451
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIH-QLI 174
TS++ GY G AL +F +M G+KP++ T V VL ACS + EG+++ ++
Sbjct: 452 TSLIDGYGNQGEGGVALALFKEM-TRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQ 510
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNE 234
+ G + + S ++++Y + G L A+ I
Sbjct: 511 CEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI----------------------------- 541
Query: 235 AINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLV 294
+ + ++ + T+ LL AC G G +KLL+ + +Y +
Sbjct: 542 -------IHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMK--PENPGYYVLIA 592
Query: 295 DLCGRAG---RLKEAFYIIEGLGVK 316
++ AG +L E I+ LGVK
Sbjct: 593 NMYAAAGSWSKLAEVRTIMRDLGVK 617
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 123 AQHGLSEEALKMFT--KMQANGGLKPNN--GTFVTVLGACSGLASLTEGQQIHQLISKTG 178
A HG +A K F+ ++Q++ + + + ++L AC + + G Q+H +G
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
+ ++ +V L+ YS + A+ I ++ + + WN +IA+YA + E I
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHP--LPWNVLIASYAKNELFEEVIAA 131
Query: 239 FNKMQELGFQANDVTYVELLTAC 261
+ +M G + + TY +L AC
Sbjct: 132 YKRMVSKGIRPDAFTYPSVLKAC 154
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 239/448 (53%), Gaps = 47/448 (10%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRL-----DEAL 70
E D+ T ++D AK+G + +A LF MP +NVV++NAMI+G+ Q + EA
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 71 ELFERMPERDM----ASWNAMLTGF--------------------FQNGEL--------- 97
+LF M R + ++++ +L FQ+ E
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY 403
Query: 98 ------NRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
+ FA ++D+ +WTSM+ + Q+ E A +F ++ ++ ++P T
Sbjct: 404 ALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH-IRPEEYTV 462
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL 211
++ AC+ A+L+ G+QI K+G T V ++ I+MY+K G + +A ++F + +
Sbjct: 463 SLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE--V 520
Query: 212 RQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGI 271
+ D+ +++ MI++ A HG NEA+N+F M+ G + N ++ +L AC H GLV +G+
Sbjct: 521 QNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGL 580
Query: 272 QYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNV 331
+YF + + I E H+ CLVDL GR GRL +A +I G + W LL+ C V
Sbjct: 581 KYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRV 640
Query: 332 HGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 391
+ ++ IGK VA++++++E E +G+Y LL N+Y G A VR M+D+G+KK+P S
Sbjct: 641 YKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALS 700
Query: 392 WIEVGNTVQVFVVGDKSHSQSEMLEYLL 419
WI +GN F V D SH S+M+ +L
Sbjct: 701 WIVIGNQTHSFAVADLSHPSSQMIYTML 728
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 174/411 (42%), Gaps = 88/411 (21%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP------ 77
++D +K G++D A +LFDR R+ VSWN++I+GY + +E L L +M
Sbjct: 188 VLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNL 247
Query: 78 ------------------------------------ERDMASWNAMLTGFFQNGELNRAE 101
E D+ A+L + +NG L A
Sbjct: 248 TTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAI 307
Query: 102 KLFAELPQKDVITWTSMMTGYAQHG-----LSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
KLF+ +P K+V+T+ +M++G+ Q S EA K+F MQ GL+P+ TF VL
Sbjct: 308 KLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR-GLEPSPSTFSVVLK 366
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
ACS +L G+QIH LI K FQ + + SALI +Y+ G + F ++D+
Sbjct: 367 ACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAST--SKQDI 424
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
SW MI + + A +LF ++ + + T +++AC+ + G Q
Sbjct: 425 ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQ---- 480
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPL-LAGCNVHGNA 335
I+G +K + + + + +++ +
Sbjct: 481 ---------------------------------IQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 336 DIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
L + ++V++ + TYS + + A G EA N+ MK G+K
Sbjct: 508 GNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 50/290 (17%)
Query: 38 ARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA--------------- 82
AR LFDRMP RN++S+N++I+GY Q ++A+ELF E ++
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 83 ------------------------SWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSM 118
N ++ + + G+L++A LF ++D ++W S+
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 119 MTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS---GLASLTEGQQIHQLIS 175
++GY + G +EE L + KM + GL +VL AC + +G IH +
Sbjct: 221 ISGYVRVGAAEEPLNLLAKMHRD-GLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG----- 230
K G + + V +AL++MY+K G L A K+F L+ ++++++N MI+ +
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLF--SLMPSKNVVTYNAMISGFLQMDEITDE 337
Query: 231 YGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN 280
+EA LF MQ G + + T+ +L ACS A ++ G Q + KN
Sbjct: 338 ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN 387
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 123/239 (51%), Gaps = 14/239 (5%)
Query: 96 ELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL 155
EL A +LF +P++++I++ S+++GY Q G E+A+++F + + LK + T+ L
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAR-EANLKLDKFTYAGAL 155
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
G C L G+ +H L+ G + +++ LI+MYSKCG+L A +FD +RD
Sbjct: 156 GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR--CDERD 213
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS---HAGLVDEGIQ 272
+SWN +I+ Y G E +NL KM G +L AC + G +++G+
Sbjct: 214 QVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA 273
Query: 273 ---YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
Y KL I V+ L+D+ + G LKEA + + K ++ + +++G
Sbjct: 274 IHCYTAKLGMEFDIVVR----TALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMISG 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 12/230 (5%)
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
RA+ F + Q ++T + G LS T + + G + +
Sbjct: 6 RAKTFFNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEG--------YKILFQTA 57
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ S+ G+ H + K+ +++ L+NMY KC EL AR++FD + +R++IS
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDR--MPERNIIS 115
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
+N +I+ Y G+ +A+ LF + +E + + TY L C +D G + L+
Sbjct: 116 FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLV 174
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ + L+D+ + G+L +A + + + +S W L++G
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS-WNSLISG 223
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 236/430 (54%), Gaps = 46/430 (10%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
ERDV +++ AK G++ AR LFD + R+ VSWN+MI+GY++ +A++LF +
Sbjct: 164 ERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRK 223
Query: 76 MPE-------RDMASW--------------------------------NAMLTGFFQNGE 96
M E R + S + +++ + + G+
Sbjct: 224 MEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGD 283
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
L+ A ++F ++ +KD + WT+M+T Y+Q+G S EA K+F +M+ G + P+ GT TVL
Sbjct: 284 LDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG-VSPDAGTLSTVLS 342
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
AC + +L G+QI S+ Q N V + L++MY KCG + A ++F+ + ++
Sbjct: 343 ACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFE--AMPVKNE 400
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+WN MI AYAH G+ EA+ LF++M +D+T++ +L+AC HAGLV +G +YF +
Sbjct: 401 ATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHE 457
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ + K +HY ++DL RAG L EA+ +E K + +L C+ +
Sbjct: 458 MSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVA 517
Query: 337 IGKLVAKKILKV-EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
I + + ++++ E +NAG Y + SN+ A + W E+A +R M+D+G+ K PGCSWIE+
Sbjct: 518 IREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEI 577
Query: 396 GNTVQVFVVG 405
+ F+ G
Sbjct: 578 EGELMEFLAG 587
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 197/395 (49%), Gaps = 32/395 (8%)
Query: 8 TMAFNQMQERDVSSWTTMVDGLAKS-GRIDDARALFDRMPLRNV----VSWNAMITGYAQ 62
+ F+ +E + S+ M+ GL + + A +L+ RM + ++N + A+
Sbjct: 85 SFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAK 144
Query: 63 NRRLDEALE----LFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSM 118
+ LF+ ERD+ ++++ + + G++ A KLF E+ ++D ++W SM
Sbjct: 145 LEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSM 204
Query: 119 MTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG 178
++GY++ G +++A+ +F KM+ G +P+ T V++LGACS L L G+ + ++
Sbjct: 205 ISGYSEAGYAKDAMDLFRKMEEE-GFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK 263
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
+T + S LI+MY KCG+L AR++F+ + ++D ++W MI Y+ +G +EA L
Sbjct: 264 IGLSTFLGSKLISMYGKCGDLDSARRVFNQMI--KKDRVAWTAMITVYSQNGKSSEAFKL 321
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCG 298
F +M++ G + T +L+AC G ++ G Q + S+Q LVD+ G
Sbjct: 322 FFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ-IETHASELSLQHNIYVATGLVDMYG 380
Query: 299 RAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD------------------IGKL 340
+ GR++EA + E + VK + + W ++ G+A IG L
Sbjct: 381 KCGRVEEALRVFEAMPVK-NEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVL 439
Query: 341 VAKKILKVEHENAGTYSLLSNMYASVGKWKEAANV 375
A + H+ + +S+M+ V K + N+
Sbjct: 440 SACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNI 474
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 164/334 (49%), Gaps = 40/334 (11%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQH-GLSEEALKMFTKMQANGG 143
N ++ + G+ N + LF+ + + ++ M+ G E AL ++ +M+ +G
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSG- 127
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR 203
LKP+ T+ V AC+ L + G+ +H + K G + + + +LI MY+KCG++ AR
Sbjct: 128 LKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYAR 187
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
K+FD+ + +RD +SWN MI+ Y+ GY +A++LF KM+E GF+ ++ T V +L ACSH
Sbjct: 188 KLFDE--ITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 264 AG------LVDE-------GIQYF--DKLLK---------------NRSIQVKEDHYACL 293
G L++E G+ F KL+ N+ I+ + +
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAM 305
Query: 294 VDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI--LKV 348
+ + + G+ EA F+ +E GV +L+ C G ++GK + L +
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL 365
Query: 349 EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
+H N + L +MY G+ +EA V M K
Sbjct: 366 QH-NIYVATGLVDMYGKCGRVEEALRVFEAMPVK 398
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 241/453 (53%), Gaps = 45/453 (9%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMAS 83
+++ G + SG D A LFD ++VV+W AMI G+ +N EA+ F M + +A+
Sbjct: 143 SLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAA 202
Query: 84 WNAMLTG--------------------FFQNGEL--------------------NRAEKL 103
+ + + G + + A+K+
Sbjct: 203 NEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKV 262
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F E+P ++V+TWT+++ GY Q ++ + +F +M + PN T +VL AC+ + +
Sbjct: 263 FDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEM-LKSDVAPNEKTLSSVLSACAHVGA 321
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
L G+++H + K + NT + LI++Y KCG L A +F+ L ++++ +W MI
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFER--LHEKNVYTWTAMI 379
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
+A HGY +A +LF M N+VT++ +L+AC+H GLV+EG + F + ++
Sbjct: 380 NGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNM 439
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
+ K DHYAC+VDL GR G L+EA +IE + ++ + VWG L C +H + ++GK A
Sbjct: 440 EPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAAS 499
Query: 344 KILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV-GNTVQVF 402
+++K++ ++G Y+LL+N+Y+ W E A VR +MKD+ + K PG SWIEV G +
Sbjct: 500 RVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFI 559
Query: 403 VVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDD 435
DK +S+ L L + +M + D L+D
Sbjct: 560 AFDDKKPLESDDLYKTLDTVGVQM-RLPDELED 591
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 139/252 (55%), Gaps = 6/252 (2%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N++++G+ +G + A +LF KDV+TWT+M+ G+ ++G + EA+ F +M+ G+
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKT-GV 200
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG-FQENTRVVSALINMYSKCGELHIAR 203
N T V+VL A + + G+ +H L +TG + + + S+L++MY KC A+
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQ 260
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
K+FD+ + R++++W +IA Y ++ + +F +M + N+ T +L+AC+H
Sbjct: 261 KVFDE--MPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAH 318
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWG 323
G + G + ++KN SI++ L+DL + G L+EA + E L K ++ W
Sbjct: 319 VGALHRGRRVHCYMIKN-SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK-NVYTWT 376
Query: 324 PLLAGCNVHGNA 335
++ G HG A
Sbjct: 377 AMINGFAAHGYA 388
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 10/288 (3%)
Query: 96 ELNRAEKLFAELPQKDVITWTSMMTGYAQHGLS---EEALKMFTKMQANGGLKPNNGTFV 152
+ A +L +L + W S++ G+ G++ + + M+ NG + P+ TF
Sbjct: 51 QFRYARRLLCQLQTLSIQLWDSLI-GHFSGGITLNRRLSFLAYRHMRRNGVI-PSRHTFP 108
Query: 153 TVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR 212
+L A L + Q H I K G + V ++LI+ YS G A ++FD
Sbjct: 109 PLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGA--E 165
Query: 213 QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ 272
+D+++W MI + +G +EA+ F +M++ G AN++T V +L A V G
Sbjct: 166 DKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRS 225
Query: 273 YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVH 332
L+ ++ + LVD+ G+ +A + + + + ++ W L+AG
Sbjct: 226 VHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIAGYVQS 284
Query: 333 GNADIGKLVAKKILKVE-HENAGTYSLLSNMYASVGKWKEAANVRMKM 379
D G LV +++LK + N T S + + A VG V M
Sbjct: 285 RCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM 332
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 229/410 (55%), Gaps = 51/410 (12%)
Query: 33 GRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPE-------------- 78
G ++ +F+ +P NVV+W ++I+G+ N R +A+E F M
Sbjct: 156 GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL 215
Query: 79 ------RDMAS---WNAMLTG-----FFQN-------------------GELNRAEKLFA 105
+D+ + ++ L G +FQ+ G+L A LF
Sbjct: 216 VACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFD 275
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+P++ +++W S++TGY+Q+G +EEAL MF M + G+ P+ TF++V+ A
Sbjct: 276 GMPERTLVSWNSIITGYSQNGDAEEALCMFLDM-LDLGIAPDKVTFLSVIRASMIQGCSQ 334
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
GQ IH +SKTGF ++ +V AL+NMY+K G+ A+K F+D L ++D I+W +I
Sbjct: 335 LGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFED--LEKKDTIAWTVVIIG 392
Query: 226 YAHHGYGNEAINLFNKMQELGFQAND-VTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQ 284
A HG+GNEA+++F +MQE G D +TY+ +L ACSH GLV+EG +YF ++ ++
Sbjct: 393 LASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLE 452
Query: 285 VKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKK 344
+HY C+VD+ RAGR +EA +++ + VK ++++WG LL GC++H N ++ +
Sbjct: 453 PTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSM 512
Query: 345 ILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIE 394
+ + E +G Y LLSN+YA G+W + +R MK K + K G S +E
Sbjct: 513 VAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 129/248 (52%), Gaps = 13/248 (5%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
L+ A +F + V W SM+ GY+ ++AL + +M G P+ TF VL
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEM-LRKGYSPDYFTFPYVLK 115
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
ACSGL + G +H + KTGF+ N V + L++MY CGE++ ++F+D + Q ++
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFED--IPQWNV 173
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQY--- 273
++W +I+ + ++ ++AI F +MQ G +AN+ V+LL AC + G +
Sbjct: 174 VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGF 233
Query: 274 -----FDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
FD +++ + L+D+ + G L+ A Y+ +G+ + +L W ++ G
Sbjct: 234 LQGLGFDPYFQSK-VGFNVILATSLIDMYAKCGDLRTARYLFDGMPER-TLVSWNSIITG 291
Query: 329 CNVHGNAD 336
+ +G+A+
Sbjct: 292 YSQNGDAE 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGE---LHIARKIFD 207
+ +L SL E Q+H L+ K+ N +S LI+ + C E L AR +F+
Sbjct: 6 YKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 208 DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
+ + WN MI Y++ ++A+ + +M G+ + T+ +L ACS GL
Sbjct: 66 S--IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS--GLR 121
Query: 268 DEGIQY---FDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
D IQ+ + +V CL+ + G + + E + + ++ WG
Sbjct: 122 D--IQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGS 178
Query: 325 LLAG 328
L++G
Sbjct: 179 LISG 182
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 239/447 (53%), Gaps = 47/447 (10%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRN-VVSWNAMITGYAQNRRLD 67
+AF + D + +V +K ++DA+ +FD +P R+ V WNA++ GY+Q R +
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 68 EALELFERMPER---------------------------------------DMASWNAML 88
+AL +F +M E D+ NA++
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 89 TGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
+ ++ L A +F + ++D+ TW S++ + G + L +F +M +G ++P+
Sbjct: 305 DMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG-IRPDI 363
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKTGF----QENTRVVSALINMYSKCGELHIARK 204
T TVL C LASL +G++IH + +G N + ++L++MY KCG+L AR
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+FD +R +D SWN MI Y G A+++F+ M G + +++T+V LL ACSH+
Sbjct: 424 VFDS--MRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHS 481
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
G ++EG + ++ +I DHYAC++D+ GRA +L+EA+ + + + VW
Sbjct: 482 GFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRS 541
Query: 325 LLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+L+ C +HGN D+ + K++ ++E E+ G Y L+SN+Y GK++E +VR M+ + +
Sbjct: 542 ILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNV 601
Query: 385 KKQPGCSWIEVGNTVQVFVVGDKSHSQ 411
KK PGCSWI + N V F G+++H +
Sbjct: 602 KKTPGCSWIVLKNGVHTFFTGNQTHPE 628
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 132/255 (51%), Gaps = 12/255 (4%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
+++ + + G + RA +F ++DV + ++++G+ +G +A++ + +M+ANG L
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
P+ TF ++L + L++ +++H L K GF + V S L+ YSK + A+K
Sbjct: 159 -PDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQK 216
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+FD+ L + D + WN ++ Y+ +A+ +F+KM+E G + T +L+A + +
Sbjct: 217 VFDE-LPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVS 275
Query: 265 GLVDEGIQYFDKLLKNRS---IQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSV 321
G +D G +K S I V L+D+ G++ L+EA I E + + L
Sbjct: 276 GDIDNGRSIHGLAVKTGSGSDIVVSN----ALIDMYGKSKWLEEANSIFEAMDER-DLFT 330
Query: 322 WGPLLAGCNVHGNAD 336
W +L + G+ D
Sbjct: 331 WNSVLCVHDYCGDHD 345
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT-RVVSALINMYSKCGELHIARKI 205
N T + L C+ GQQIH + + GF +++ R ++L+NMY+KCG + A +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 206 FDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL 258
F +RD+ +N +I+ + +G +A+ + +M+ G + T+ LL
Sbjct: 119 FGGS---ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLL 168
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 219/353 (62%), Gaps = 3/353 (0%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N+++ YA + A +F +M RD+ SW +M+ G+ + G + A ++F E+P +++
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF 215
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
TW+ M+ GYA++ E+A+ +F M+ G + N V+V+ +C+ L +L G++ ++
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFMKREG-VVANETVMVSVISSCAHLGALEFGERAYEY 274
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
+ K+ N + +AL++M+ +CG++ A +F+ L + D +SW+ +I A HG+ +
Sbjct: 275 VVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG--LPETDSLSWSSIIKGLAVHGHAH 332
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
+A++ F++M LGF DVT+ +L+ACSH GLV++G++ ++ + K+ I+ + +HY C+
Sbjct: 333 KAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCI 392
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENA 353
VD+ GRAG+L EA I + VK + + G LL C ++ N ++ + V ++KV+ E++
Sbjct: 393 VDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHS 452
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGD 406
G Y LLSN+YA G+W + ++R MK+K +KK PG S IE+ + F +GD
Sbjct: 453 GYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGD 505
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 41/229 (17%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F QM RDV SWT+MV G K G +++AR +FD MP RN+ +W+ MI GYA+N ++A+
Sbjct: 175 FGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAI 234
Query: 71 ELFERMPERDMAS---------------------------------------WNAMLTGF 91
+LFE M + + A++ F
Sbjct: 235 DLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMF 294
Query: 92 FQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
++ G++ +A +F LP+ D ++W+S++ G A HG + +A+ F++M + G + P + TF
Sbjct: 295 WRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI-PRDVTF 353
Query: 152 VTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGEL 199
VL ACS + +G +I++ + K G + +++M + G+L
Sbjct: 354 TAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKL 402
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 133/270 (49%), Gaps = 36/270 (13%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
L A +F+++ ++ + ++ ++ +A +T+M + P+N TF ++
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQM-LKSRIWPDNITFPFLIK 125
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
A S + + G+Q H I + GFQ + V ++L++MY+ CG + A +IF G + RD+
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF--GQMGFRDV 183
Query: 217 ISWNGMIAAYAH--------------------------HGYGN-----EAINLFNKMQEL 245
+SW M+A Y +GY +AI+LF M+
Sbjct: 184 VSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 246 GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKE 305
G AN+ V ++++C+H G ++ G + ++ ++K+ + V LVD+ R G +++
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEK 302
Query: 306 AFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
A ++ EGL SLS W ++ G VHG+A
Sbjct: 303 AIHVFEGLPETDSLS-WSSIIKGLAVHGHA 331
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 52/226 (23%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVS------------------ 52
F++M R++ +W+ M++G AK+ + A LF+ M VV+
Sbjct: 206 FDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGAL 265
Query: 53 ---------------------WNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGF 91
A++ + + +++A+ +FE +PE D SW++++ G
Sbjct: 266 EFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGL 325
Query: 92 FQNGELNRAEKLFAELPQKDVI----TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP- 146
+G ++A F+++ I T+T++++ + GL E+ L+++ M+ + G++P
Sbjct: 326 AVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPR 385
Query: 147 --NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALI 190
+ G V +LG LA + I K + N ++ AL+
Sbjct: 386 LEHYGCIVDMLGRAGKLA------EAENFILKMHVKPNAPILGALL 425
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 240/425 (56%), Gaps = 11/425 (2%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
DV TT++D K+G + AR +FD M +N+V+WN++++G + L +A L RM
Sbjct: 259 DVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRME 318
Query: 78 ER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLSE 129
+ D +WN++ +G+ G+ +A + ++ +K +V++WT++ +G +++G
Sbjct: 319 KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 378
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSAL 189
ALK+F KMQ G + PN T T+L L+ L G+++H + + V +AL
Sbjct: 379 NALKVFIKMQEEG-VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATAL 437
Query: 190 INMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQA 249
++MY K G+L A +IF ++ + L SWN M+ YA G G E I F+ M E G +
Sbjct: 438 VDMYGKSGDLQSAIEIFWG--IKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Query: 250 NDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYI 309
+ +T+ +L+ C ++GLV EG +YFD + I +H +C+VDL GR+G L EA+
Sbjct: 496 DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDF 555
Query: 310 IEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKW 369
I+ + +K ++WG L+ C +H + ++ ++ K++ +E N+ Y ++ N+Y+++ +W
Sbjct: 556 IQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRW 615
Query: 370 KEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKF 429
++ +R M++ ++ Q SWI++ TV +F K+H + + L L ++MKK
Sbjct: 616 EDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKS 675
Query: 430 GDILD 434
G + D
Sbjct: 676 GYVPD 680
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 200/408 (49%), Gaps = 65/408 (15%)
Query: 90 GFF-QNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
GF+ + L A KLF E+P++D + W ++ + G E+A+++F +MQ +G K +
Sbjct: 31 GFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGA-KAYD 89
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD 208
T V +L CS EG+QIH + + G + N + ++LI MYS+ G+L ++RK+F+
Sbjct: 90 STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNS 149
Query: 209 GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVD 268
++ R+L SWN ++++Y GY ++AI L ++M+ G + + VT+ LL+ + GL
Sbjct: 150 --MKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSK 207
Query: 269 EGIQYFDKL----LKNRSIQVKE----------------------------DHY--ACLV 294
+ I ++ LK + + D Y L+
Sbjct: 208 DAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLI 267
Query: 295 DLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE--- 351
D+ + G L A + + + K ++ W L++G + A + K ++++E E
Sbjct: 268 DMYIKTGYLPYARMVFDMMDAK-NIVAWNSLVSGLSY---ACLLKDAEALMIRMEKEGIK 323
Query: 352 -NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV----------GNTVQ 400
+A T++ L++ YA++GK ++A +V KMK+KG+ SW + N ++
Sbjct: 324 PDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV-VSWTAIFSGCSKNGNFRNALK 382
Query: 401 VFV------VGDKSHSQSEMLEYL--LLGLHTKMKKFGDILDDDLSRD 440
VF+ VG + + S +L+ L L LH+ + G L +L D
Sbjct: 383 VFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICD 430
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 116/440 (26%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMIT----------GY 60
F++M +RD +W +V +SG + A LF M ++++ + G+
Sbjct: 46 FDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGF 105
Query: 61 AQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQK---------- 110
A+ R++ + E +++ N+++ + +NG+L + K+F + +
Sbjct: 106 AEGRQIHGYV--LRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILS 163
Query: 111 -------------------------DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
D++TW S+++GYA GLS++A+ + +MQ GLK
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI-AGLK 222
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKI 205
P+ + ++L A + L G+ IH I + + V + LI+MY K G L AR +
Sbjct: 223 PSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMV 282
Query: 206 FD-------------------DGLLR--------------QRDLISWNGMIAAYAHHGYG 232
FD LL+ + D I+WN + + YA G
Sbjct: 283 FDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKP 342
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK----------NRS 282
+A+++ KM+E G N V++ + + CS G ++ F K+ + +
Sbjct: 343 EKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTL 402
Query: 283 IQV----------KEDHYAC--------------LVDLCGRAGRLKEAFYIIEGLGVKLS 318
+++ KE H C LVD+ G++G L+ A I G+ K S
Sbjct: 403 LKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK-S 461
Query: 319 LSVWGPLLAGCNVHGNADIG 338
L+ W +L G + G + G
Sbjct: 462 LASWNCMLMGYAMFGRGEEG 481
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 12/224 (5%)
Query: 167 GQQIHQLISKTGF-QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G IH + K G +TRVVSA + Y +C L A K+FD+ + +RD ++WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDE--MPKRDDLAWNEIVMV 63
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
G +A+ LF +MQ G +A D T V+LL CS+ EG Q +L+ + +
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR---LGL 120
Query: 286 KEDHYAC--LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD--IGKLV 341
+ + C L+ + R G+L+ + + + + +LS W +L+ G D IG L
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR-NLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 342 AKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
+I ++ + SLLS YAS G K+A V +M+ GLK
Sbjct: 180 EMEICGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLK 222
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 243/428 (56%), Gaps = 14/428 (3%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRL 66
F++M+ +D+ SWTTM+ G + D A + M +V ++ A+++ A L
Sbjct: 355 FSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 67 DEALELFERMPERDMASW----NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
D +EL + + + S+ N ++ + + +++A +F +P+K+VI+WTS++ G
Sbjct: 415 DTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGL 474
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
+ EAL +M+ L+PN T L AC+ + +L G++IH + +TG +
Sbjct: 475 RLNNRCFEALIFLRQMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
+ +AL++MY +CG ++ A F+ +++D+ SWN ++ Y+ G G+ + LF++M
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQFNS---QKKDVTSWNILLTGYSERGQGSMVVELFDRM 589
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
+ + +++T++ LL CS + +V +G+ YF K+ ++ + HYAC+VDL GRAG
Sbjct: 590 VKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGE 648
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNM 362
L+EA I+ + V +VWG LL C +H D+G+L A+ I +++ ++ G Y LL N+
Sbjct: 649 LQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNL 708
Query: 363 YASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGL 422
YA GKW+E A VR MK+ GL GCSW+EV V F+ DK H Q++ + +L G
Sbjct: 709 YADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGF 768
Query: 423 HTKMKKFG 430
+ KM + G
Sbjct: 769 YEKMSEVG 776
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 172/364 (47%), Gaps = 51/364 (14%)
Query: 8 TMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLD 67
++A + M V + + G + DA +F +M RN+ SWN ++ GYA+ D
Sbjct: 118 SIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFD 177
Query: 68 EALELFERM-------P---------------------------------ERDMASWNAM 87
EA+ L+ RM P E D+ NA+
Sbjct: 178 EAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNAL 237
Query: 88 LTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPN 147
+T + + G++ A LF +P++D+I+W +M++GY ++G+ E L++F M+ + P+
Sbjct: 238 ITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGL-SVDPD 296
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD 207
T +V+ AC L G+ IH + TGF + V ++L MY G A K+F
Sbjct: 297 LMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS 356
Query: 208 DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
+ ++D++SW MI+ Y ++ ++AI+ + M + + +++T +L+AC+ G +
Sbjct: 357 R--MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 268 DEGIQYFDKLLKNRSIQ---VKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
D G++ +K R I V + L+++ + + +A I + K +S W
Sbjct: 415 DTGVELHKLAIKARLISYVIVANN----LINMYSKCKCIDKALDIFHNIPRKNVIS-WTS 469
Query: 325 LLAG 328
++AG
Sbjct: 470 IIAG 473
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 170/361 (47%), Gaps = 46/361 (12%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELF-- 73
E D+ ++ K G + AR LFDRMP R+++SWNAMI+GY +N E LELF
Sbjct: 228 ELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFA 287
Query: 74 ------------------------ERMPERDMASW-------------NAMLTGFFQNGE 96
+R RD+ ++ N++ + G
Sbjct: 288 MRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGS 347
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
AEKLF+ + +KD+++WT+M++GY + L ++A+ + +M +KP+ T VL
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLS 406
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
AC+ L L G ++H+L K V + LINMYSKC + A IF + + ++++
Sbjct: 407 ACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHN--IPRKNV 464
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
ISW +IA + EA+ +F + ++ Q N +T L AC+ G + G +
Sbjct: 465 ISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAH 523
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+L+ + + + L+D+ R GR+ A+ K ++ W LL G + G
Sbjct: 524 VLRT-GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLTGYSERGQGS 580
Query: 337 I 337
+
Sbjct: 581 M 581
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 180/397 (45%), Gaps = 82/397 (20%)
Query: 28 GLAKSGRIDDARALFDRM-PLRNVVS---WNAMITGYAQNRRLDEALELFE----RMPER 79
GL +G++++A L + M LR V + A++ R +E +++ M
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
+ NA L F + G L A +F ++ ++++ +W ++ GYA+ G +EA+ ++ +M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
GG+KP+ TF VL C G+ L G+++H + + G++ + VV+ALI MY KCG++
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
AR +FD + +RD+ISWN MI+ Y +G +E + LF M+ L + +T +++
Sbjct: 248 KSARLLFDR--MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSL 319
AC +LL +R R GR A+ I G V +S+
Sbjct: 306 AC--------------ELLGDR-----------------RLGRDIHAYVITTGFAVDISV 334
Query: 320 SVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKM 379
CN L+ MY + G W+EA + +M
Sbjct: 335 ---------CNS---------------------------LTQMYLNAGSWREAEKLFSRM 358
Query: 380 KDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLE 416
+ K + SW + + + + DK+ M++
Sbjct: 359 ERKDI-----VSWTTMISGYEYNFLPDKAIDTYRMMD 390
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 248 bits (632), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 208/353 (58%), Gaps = 5/353 (1%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N ++ + GE A+K+ ++VITW M+ GY ++ EEALK M + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
KPN +F + L AC+ L L + +H L+ +G + N + SAL+++Y+KCG++ +R+
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+F +++ D+ WN MI +A HG EAI +F++M+ + +T++ LLT CSH
Sbjct: 222 VFYS--VKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
GL++EG +YF + + SIQ K +HY +VDL GRAGR+KEA+ +IE + ++ + +W
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 325 LLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
LL+ + N ++G++ + + K + +G Y LLSN+Y+S KW+ A VR M +G+
Sbjct: 340 LLSSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 385 KKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDL 437
+K G SW+E G + F GD SH +++ + +L GL K K G + D DL
Sbjct: 397 RKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDL 449
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 92/199 (46%), Gaps = 37/199 (18%)
Query: 49 NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP 108
N + +A++ YA+ + + E+F + D++ WNAM+TGF +G
Sbjct: 199 NAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHG------------- 245
Query: 109 QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
L+ EA+++F++M+A + P++ TF+ +L CS L EG+
Sbjct: 246 ------------------LATEAIRVFSEMEAE-HVSPDSITFLGLLTTCSHCGLLEEGK 286
Query: 169 QIHQLISKT-GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA-- 225
+ L+S+ Q A++++ + G + A ++ + + + D++ W ++++
Sbjct: 287 EYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPI-EPDVVIWRSLLSSSR 345
Query: 226 -YAHHGYGNEAINLFNKMQ 243
Y + G AI +K +
Sbjct: 346 TYKNPELGEIAIQNLSKAK 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRR 65
F ++ DVS W M+ G A G +A +F M +V +++ ++T +
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 66 LDEALELFERMPER-----DMASWNAMLTGFFQNGELNRAEKLFAELP-QKDVITWTSMM 119
L+E E F M R + + AM+ + G + A +L +P + DV+ W S++
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 120 TG---YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK 176
+ Y L E A++ +K ++ G +V + S Q++ +L+SK
Sbjct: 342 SSSRTYKNPELGEIAIQNLSKAKS--------GDYVLLSNIYSSTKKWESAQKVRELMSK 393
Query: 177 TGFQE 181
G ++
Sbjct: 394 EGIRK 398
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 40/224 (17%)
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR--- 203
++G VL +C ++ Q H I K G+ ++ + + Y +C ++AR
Sbjct: 29 DHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLL 88
Query: 204 ---------------------KIFDDGLLRQ-------RDLISWNGMIAAYAHHGYGNEA 235
KI + GL ++ +++I+WN MI Y + EA
Sbjct: 89 LWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEA 148
Query: 236 IN-LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLV 294
+ L N + + N ++ L AC+ G + ++ L+ + I++ + LV
Sbjct: 149 LKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHA-KWVHSLMIDSGIELNAILSSALV 207
Query: 295 DL---CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
D+ CG G +E FY ++ + +S+W ++ G HG A
Sbjct: 208 DVYAKCGDIGTSREVFYSVK----RNDVSIWNAMITGFATHGLA 247
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 194/329 (58%), Gaps = 3/329 (0%)
Query: 87 MLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
+L + +G+L A LF L +D+I W +M++GY Q GL +E L ++ M+ N + P
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNR-IVP 207
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
+ TF +V ACS L L G++ H ++ K + N V SAL++MY KC ++F
Sbjct: 208 DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 267
Query: 207 DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGL 266
D L R++I+W +I+ Y +HG +E + F KM+E G + N VT++ +LTAC+H GL
Sbjct: 268 DQ--LSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGL 325
Query: 267 VDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLL 326
VD+G ++F + ++ I+ + HYA +VD GRAGRL+EA+ + K VWG LL
Sbjct: 326 VDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
Query: 327 AGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
C +HGN + +L A K L+++ N G Y + +N YAS G + A+ VR KM++ G+KK
Sbjct: 386 GACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKK 445
Query: 387 QPGCSWIEVGNTVQVFVVGDKSHSQSEML 415
PG S IE+ V F+ D SH SE +
Sbjct: 446 DPGYSQIELQGEVHRFMKDDTSHRLSEKI 474
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 42/241 (17%)
Query: 30 AKSGRIDDARALFDRMPLRNVVSWNAMITGYAQ----------------NR--------- 64
A SG + A LF + +R+++ WNAMI+GY Q NR
Sbjct: 154 ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFA 213
Query: 65 ---RLDEALELFE-----------RMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQK 110
R AL+ E R + ++ +A++ +F+ + ++F +L +
Sbjct: 214 SVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR 273
Query: 111 DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEG-QQ 169
+VITWTS+++GY HG E LK F KM+ G +PN TF+ VL AC+ + +G +
Sbjct: 274 NVITWTSLISGYGYHGKVSEVLKCFEKMKEE-GCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
+ + G + + +A+++ + G L A + ++ + W ++ A H
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPV-WGSLLGACRIH 391
Query: 230 G 230
G
Sbjct: 392 G 392
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Query: 141 NGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELH 200
+ GL+ T+ +L C T+G++IH + GF N + L+ +Y+ G+L
Sbjct: 101 SSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQ 160
Query: 201 IARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA 260
A +F L+ RDLI WN MI+ Y G E + ++ M++ + T+ + A
Sbjct: 161 TAGILFRS--LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA 218
Query: 261 CSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLS 320
CS ++ G + ++K R I+ + LVD+ + + + + L + ++
Sbjct: 219 CSALDRLEHGKRAHAVMIK-RCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVI 276
Query: 321 VWGPLLAGCNVHGNAD 336
W L++G HG
Sbjct: 277 TWTSLISGYGYHGKVS 292
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 254/459 (55%), Gaps = 47/459 (10%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRR-LDEALELF--- 73
+VS ++ A++G +++ R +F MP + VSWN++I A++ R L EA+ F
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 74 ERMPER------------------------------------DMASWNAMLTGFFQNGEL 97
+R ++ + + NA++ + + GE+
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 98 NRAEKLFAELPQK-DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
+ EK+F+ + ++ D +TW SM++GY + L +AL + M G + ++ + TVL
Sbjct: 569 DGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ-RLDSFMYATVLS 627
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
A + +A+L G ++H + + + V SAL++MYSKCG L A + F+ + R+
Sbjct: 628 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNT--MPVRNS 685
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAND-VTYVELLTACSHAGLVDEGIQYFD 275
SWN MI+ YA HG G EA+ LF M+ G D VT+V +L+ACSHAGL++EG ++F+
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFE 745
Query: 276 KLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLL-AGCNVHG- 333
+ + + + +H++C+ D+ GRAG L + IE + +K ++ +W +L A C +G
Sbjct: 746 SMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGR 805
Query: 334 NADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWI 393
A++GK A+ + ++E ENA Y LL NMYA+ G+W++ R KMKD +KK+ G SW+
Sbjct: 806 KAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Query: 394 EVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDI 432
+ + V +FV GDKSH ++++ L L+ KM+ G +
Sbjct: 866 TMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYV 904
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 163/352 (46%), Gaps = 44/352 (12%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMAS- 83
+V+ AK G I DAR +F M ++ VSWN+MITG QN EA+E ++ M D+
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 84 ---------------W-----------------------NAMLTGFFQNGELNRAEKLFA 105
W NA++T + + G LN K+F+
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 106 ELPQKDVITWTSMMTGYAQHGLS-EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
+P+ D ++W S++ A+ S EA+ F Q G K N TF +VL A S L+
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ-RAGQKLNRITFSSVLSAVSSLSFG 533
Query: 165 TEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIA 224
G+QIH L K + +ALI Y KCGE+ KIF + +RD ++WN MI+
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSR-MAERRDNVTWNSMIS 592
Query: 225 AYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQ 284
Y H+ +A++L M + G + + Y +L+A + ++ G++ ++ ++
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR-ACLE 651
Query: 285 VKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ LVD+ + GRL A + V+ S S W +++G HG +
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQGE 702
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 109/195 (55%), Gaps = 7/195 (3%)
Query: 72 LFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEA 131
L++ ++D+ N ++ + + G+ A K+F E+P ++ ++W +++GY+++G +EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 132 LKMFTKMQANGGLKPNNGTFVTVLGACSGLAS--LTEGQQIHQLISKTGFQENTRVVSAL 189
L +F + G+ N FV+VL AC + S + G+QIH L+ K + + V + L
Sbjct: 87 L-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 190 INMYSKC-GELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
I+MY KC G + A F D + ++ +SWN +I+ Y+ G A +F+ MQ G +
Sbjct: 146 ISMYWKCIGSVGYALCAFGD--IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 249 ANDVTYVELL-TACS 262
+ T+ L+ TACS
Sbjct: 204 PTEYTFGSLVTTACS 218
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 51/294 (17%)
Query: 33 GRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM---------------- 76
G + A F + ++N VSWN++I+ Y+Q A +F M
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 77 --------PE-----------------RDMASWNAMLTGFFQNGELNRAEKLFAELPQKD 111
P+ D+ + +++ F ++G L+ A K+F ++ ++
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 112 VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA-----SLTE 166
+T +M G + EEA K+F M + + P ++V +L + + L +
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKK 331
Query: 167 GQQIHQLISKTGFQE-NTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G+++H + TG + + + L+NMY+KCG + AR++F + +D +SWN MI
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY--FMTDKDSVSWNSMITG 389
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
+G EA+ + M+ T + L++C+ G Q + LK
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
H + K ++ + + LIN Y + G+ ARK+FD+ LR + +SW +++ Y+ +
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR--NCVSWACIVSGYSRN 80
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
G EA+ M + G +N +V +L AC G V
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 208/335 (62%), Gaps = 7/335 (2%)
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ--ANGGLKPNNGTFVTVLGA 157
A K+F E+P++D ++W + + Y ++ + + L +F KM+ +G +KP+ T + L A
Sbjct: 167 ACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA 226
Query: 158 CSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI 217
C+ L +L G+Q+H I + G + + L++MYS+CG + A ++F +R+R+++
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYG--MRERNVV 284
Query: 218 SWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
SW +I+ A +G+G EAI FN+M + G + T LL+ACSH+GLV EG+ +FD++
Sbjct: 285 SWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRM 344
Query: 278 LKNRSIQVKED--HYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
++ ++K + HY C+VDL GRA L +A+ +I+ + +K ++W LL C VHG+
Sbjct: 345 -RSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDV 403
Query: 336 DIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
++G+ V +++++ E AG Y LL N Y++VGKW++ +R MK+K + +PGCS IE+
Sbjct: 404 ELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIEL 463
Query: 396 GNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFG 430
TV F+V D SH + E + +L ++ ++K G
Sbjct: 464 QGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAG 498
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 118/241 (48%), Gaps = 7/241 (2%)
Query: 96 ELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL 155
++N + ++F++ + +M+ ++ E ++F ++ N L N + L
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL 120
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
C L G QIH I GF ++ +++ L+++YS C A K+FD+ + +RD
Sbjct: 121 KCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDE--IPKRD 178
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQ---ELGFQANDVTYVELLTACSHAGLVDEGIQ 272
+SWN + + Y + + + LF+KM+ + + + VT + L AC++ G +D G Q
Sbjct: 179 TVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQ 238
Query: 273 YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVH 332
D + +N + + LV + R G + +A+ + G+ + +S W L++G ++
Sbjct: 239 VHDFIDEN-GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVS-WTALISGLAMN 296
Query: 333 G 333
G
Sbjct: 297 G 297
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 130/309 (42%), Gaps = 50/309 (16%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------ 76
TT++D + DA +FD +P R+ VSWN + + Y +N+R + L LF++M
Sbjct: 152 TTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDG 211
Query: 77 ---PE-----------------------RDMAS----------WNAMLTGFFQNGELNRA 100
P+ D N +++ + + G +++A
Sbjct: 212 CVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKA 271
Query: 101 EKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSG 160
++F + +++V++WT++++G A +G +EA++ F +M G+ P T +L ACS
Sbjct: 272 YQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM-LKFGISPEEQTLTGLLSACSH 330
Query: 161 LASLTEGQQIHQLISKTGF--QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ EG + F + N ++++ + L A + ++ I
Sbjct: 331 SGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTI- 389
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQEL-GFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
W ++ A HG + + + EL +A D YV LL S G E + L
Sbjct: 390 WRTLLGACRVHGDVELGERVISHLIELKAEEAGD--YVLLLNTYSTVGKW-EKVTELRSL 446
Query: 278 LKNRSIQVK 286
+K + I K
Sbjct: 447 MKEKRIHTK 455
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 244/462 (52%), Gaps = 44/462 (9%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELF---- 73
DV + D K+ DDAR LFD +P RN+ +WNA I+ + R EA+E F
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 74 --ERMP---------------------------------ERDMASWNAMLTGFFQNGELN 98
+ P + D++ N ++ + + ++
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
+E +F E+ K+ ++W S++ Y Q+ E+A ++ + + + ++ ++ +VL AC
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI-VETSDFMISSVLSAC 320
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+G+A L G+ IH K + V SAL++MY KCG + + + FD+ + +++L++
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE--MPEKNLVT 378
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQE--LGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
N +I YAH G + A+ LF +M G N +T+V LL+ACS AG V+ G++ FD
Sbjct: 379 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS 438
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ I+ +HY+C+VD+ GRAG ++ A+ I+ + ++ ++SVWG L C +HG
Sbjct: 439 MRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ 498
Query: 337 IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVG 396
+G L A+ + K++ +++G + LLSN +A+ G+W EA VR ++K G+KK G SWI V
Sbjct: 499 LGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVK 558
Query: 397 NTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLS 438
N V F D+SH ++ ++ L L +M+ G D LS
Sbjct: 559 NQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLS 600
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 139/285 (48%), Gaps = 16/285 (5%)
Query: 47 LRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAE 106
L+N +S ++M G + R+ + L+ P +A++ L + + + +L
Sbjct: 13 LKNAISASSMRLGRVVHARIVKTLD---SPPPPFLANY---LINMYSKLDHPESARLVLR 66
Query: 107 L-PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
L P ++V++WTS+++G AQ+G AL F +M+ G + PN+ TF A + L
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREG-VVPNDFTFPCAFKAVASLRLPV 125
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G+QIH L K G + V + +MY K ARK+FD+ + +R+L +WN I+
Sbjct: 126 TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDE--IPERNLETWNAFISN 183
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
G EAI F + + + N +T+ L ACS ++ G+Q +L++
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS---GF 240
Query: 286 KEDHYAC--LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
D C L+D G+ +++ + I +G K ++S W L+A
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS-WCSLVAA 284
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 224/421 (53%), Gaps = 43/421 (10%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
++D ++V+ A+ G ++ A+ +FD +P+RN V W ++ GY + + E LF
Sbjct: 141 DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCL 200
Query: 76 MPERDMAS----------------------------------------WNAMLTGFFQNG 95
M + +A +++ + +
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR 260
Query: 96 ELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL 155
L+ A KLF ++V+ WT++++G+A+ + EA +F +M L PN T +L
Sbjct: 261 LLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL-PNQCTLAAIL 319
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
+CS L SL G+ +H + + G + + ++ I+MY++CG + +AR +FD ++ +R+
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD--MMPERN 377
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFD 275
+ISW+ MI A+ +G EA++ F+KM+ N VT+V LL+ACSH+G V EG + F+
Sbjct: 378 VISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFE 437
Query: 276 KLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
+ ++ + +E+HYAC+VDL GRAG + EA I+ + VK S WG LL+ C +H
Sbjct: 438 SMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEV 497
Query: 336 DIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
D+ +A+K+L +E E + Y LLSN+YA G W+ VR KM KG +K G S EV
Sbjct: 498 DLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Query: 396 G 396
G
Sbjct: 558 G 558
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 139/286 (48%), Gaps = 20/286 (6%)
Query: 55 AMITGYAQNRRLDEALELFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELP-- 108
A++T +Q + L+ ++ ++ E ++ +++ + Q+ L+ A F +P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 109 QKDVITWTSMMTGYAQHGLS--EEALKMFTKMQAN-GGLKPNNGTFVTVLGACSGLASLT 165
+++ +W ++++GY++ + L ++ +M+ + G+ N F + AC GL L
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA--IKACVGLGLLE 126
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G IH L K G ++ V +L+ MY++ G + A+K+FD+ + R+ + W ++
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDE--IPVRNSVLWGVLMKG 184
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH--AGLVDEGIQYFDKLLKNRSI 283
Y + E LF M++ G + +T + L+ AC + AG V + + + RS
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVH---GVSIRRSF 241
Query: 284 QVKEDHY-ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ D+ A ++D+ + L A + E V ++ +W L++G
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISG 286
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 248/466 (53%), Gaps = 45/466 (9%)
Query: 20 SSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM--- 76
S T +++ L G + AR +FD M + WN + GY +N+ E+L L+++M
Sbjct: 44 SLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDL 103
Query: 77 ---PERDMASW---------------------------------NAMLTGFFQNGELNRA 100
P+ + ++ + + GEL+ A
Sbjct: 104 GVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSA 163
Query: 101 EKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSG 160
E LF + KD++ W + + Q G S AL+ F KM A+ ++ ++ T V++L AC
Sbjct: 164 EFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA-VQFDSFTVVSMLSACGQ 222
Query: 161 LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWN 220
L SL G++I+ K N V +A ++M+ KCG AR +F++ ++QR+++SW+
Sbjct: 223 LGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE--MKQRNVVSWS 280
Query: 221 GMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK- 279
MI YA +G EA+ LF MQ G + N VT++ +L+ACSHAGLV+EG +YF +++
Sbjct: 281 TMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Query: 280 -NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
+++++ +++HYAC+VDL GR+G L+EA+ I+ + V+ +WG LL C VH + +G
Sbjct: 341 NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILG 400
Query: 339 KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNT 398
+ VA +++ + + LLSN+YA+ GKW VR KM+ G KK S +E
Sbjct: 401 QKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGK 460
Query: 399 VQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDD-DLSRDVEL 443
+ F GDKSH QS+ + L + K++K G + D + DVE+
Sbjct: 461 IHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEM 506
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 7/199 (3%)
Query: 85 NAMLTGFFQN----GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQA 140
N++LT +N G++ A ++F E+ + + W ++ GY ++ L E+L ++ KM+
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMR- 101
Query: 141 NGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELH 200
+ G++P+ T+ V+ A S L + G +H + K GF V + L+ MY K GEL
Sbjct: 102 DLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELS 161
Query: 201 IARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA 260
A +F+ ++ +DL++WN +A G A+ FNKM Q + T V +L+A
Sbjct: 162 SAEFLFES--MQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSA 219
Query: 261 CSHAGLVDEGIQYFDKLLK 279
C G ++ G + +D+ K
Sbjct: 220 CGQLGSLEIGEEIYDRARK 238
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRL 66
F MQ +D+ +W + ++G A F++M V + +M++ Q L
Sbjct: 167 FESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSL 226
Query: 67 DEALELFERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
+ E+++R + ++ NA L + G A LF E+ Q++V++W++M+ GY
Sbjct: 227 EIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGY 286
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT---GF 179
A +G S EAL +FT MQ N GL+PN TF+ VL ACS + EG++ L+ ++
Sbjct: 287 AMNGDSREALTLFTTMQ-NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNL 345
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
+ + ++++ + G L A + F + + D W ++ A A H
Sbjct: 346 EPRKEHYACMVDLLGRSGLLEEAYE-FIKKMPVEPDTGIWGALLGACAVH 394
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 168 QQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
++IH ++ +TGF E +++ L+ G++ AR++FD+ + + + WN + Y
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDE--MHKPRIFLWNTLFKGYV 85
Query: 228 HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKE 287
+ E++ L+ KM++LG + ++ TY ++ A S G G ++K
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY------- 138
Query: 288 DHYAC-------LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
+ C LV + + G L A ++ E + VK L W LA C GN+ I
Sbjct: 139 -GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIA 194
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/469 (30%), Positives = 249/469 (53%), Gaps = 46/469 (9%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM------------------------ 45
F +M DVSS+ M+ G AK G +A L+ +M
Sbjct: 188 VFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSD 247
Query: 46 ---------------PL--RNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAML 88
P+ N++ NA++ Y + + A F+ M ++DM SWN M+
Sbjct: 248 IRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMV 307
Query: 89 TGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALK-MFTKMQANGGLKPN 147
GF + G++ A+ +F ++P++D+++W S++ GY++ G + ++ +F +M +KP+
Sbjct: 308 VGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPD 367
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD 207
T V+++ + L+ G+ +H L+ + + + + SALI+MY KCG + A +F
Sbjct: 368 RVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFK 427
Query: 208 DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
++D+ W MI A HG G +A+ LF +MQE G N+VT + +LTACSH+GLV
Sbjct: 428 TA--TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLV 485
Query: 268 DEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIE-GLGVKLSLSVWGPLL 326
+EG+ F+ + + +HY LVDL RAGR++EA I++ + ++ S S+WG +L
Sbjct: 486 EEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSIL 545
Query: 327 AGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
+ C + + +L ++LK+E E G Y LLSN+YA+VG+W + R M+++G+KK
Sbjct: 546 SACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKK 605
Query: 387 QPGCSWIEVGNTVQVFVVGDK-SHSQSEMLEYLLLGLHTKMKKFGDILD 434
G S + + FV +K +H + ++ +L L+ +MK D LD
Sbjct: 606 TAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPKLDCLD 654
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 181/399 (45%), Gaps = 80/399 (20%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALF-DRMPLRNVVSWNAMITGYAQNRRLD 67
M FN + + S + +D A+ LF + P NV +N MI+ + ++ +
Sbjct: 58 MRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSK--N 115
Query: 68 EALELFERM------PERDM------AS-------------------------WNAMLTG 90
E L+ M P+R AS WN+++
Sbjct: 116 ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKF 175
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ + G AEK+FA +P DV ++ M+ GYA+ G S EALK++ KM ++ G++P+ T
Sbjct: 176 YMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSD-GIEPDEYT 234
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTG--FQENTRVVSALINMYSKCGELHIARKIFDD 208
+++L C L+ + G+ +H I + G + N + +AL++MY KC E +A++ FD
Sbjct: 235 VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDA 294
Query: 209 --------------GLLR---------------QRDLISWNGMIAAYAHHGYGNEAIN-L 238
G +R +RDL+SWN ++ Y+ G + L
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVREL 354
Query: 239 FNKMQEL-GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY--ACLVD 295
F +M + + + VT V L++ ++ G + G +++ +Q+K D + + L+D
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR---LQLKGDAFLSSALID 411
Query: 296 LCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
+ + G ++ AF + + K +++W ++ G HGN
Sbjct: 412 MYCKCGIIERAFMVFKTATEK-DVALWTSMITGLAFHGN 449
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 243/455 (53%), Gaps = 43/455 (9%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D+ + ++D K + A+ +F + +VV + AMI+GY N ++LE+F +
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 78 ERDMASWNAMLT-------------------GF-----FQN---------------GELN 98
+ ++ L GF F N G +N
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
A ++F L ++D+++W SM+T AQ A+ +F +M +G + + + L AC
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG-ICYDCVSISAALSAC 552
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ L S + G+ IH + K + S LI+MY+KCG L A +F +++++++S
Sbjct: 553 ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKT--MKEKNIVS 610
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQE-LGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
WN +IAA +HG +++ LF++M E G + + +T++E++++C H G VDEG+++F +
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Query: 278 LKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADI 337
++ IQ +++HYAC+VDL GRAGRL EA+ ++ + VWG LL C +H N ++
Sbjct: 671 TEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVEL 730
Query: 338 GKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGN 397
++ + K++ ++ N+G Y L+SN +A+ +W+ VR MK++ ++K PG SWIE+
Sbjct: 731 AEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINK 790
Query: 398 TVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDI 432
+FV GD +H +S + LL L +++ G I
Sbjct: 791 RTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYI 825
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 173/353 (49%), Gaps = 52/353 (14%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------P 77
+++ +K GR DDA LF M + V+WN MI+GY Q+ ++E+L F M P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 78 ER---------------------------------DMASWNAMLTGFFQNGELNRAEKLF 104
+ D+ +A++ +F+ ++ A+ +F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 105 AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
++ DV+ +T+M++GY +GL ++L+MF + + PN T V++L L +L
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMF-RWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 165 TEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIA 224
G+++H I K GF + A+I+MY+KCG +++A +IF+ L +RD++SWN MI
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER--LSKRDIVSWNSMIT 515
Query: 225 AYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQ 284
A + AI++F +M G + V+ L+AC A L E F K + I+
Sbjct: 516 RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC--ANLPSES---FGKAIHGFMIK 570
Query: 285 --VKEDHY--ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ D Y + L+D+ + G LK A + + + K +S W ++A C HG
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHG 622
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 184/438 (42%), Gaps = 82/438 (18%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA 82
++++ + G+ID LFDR+ ++ V WN M+ GYA+ LD ++ F M D
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM-RMDQI 235
Query: 83 SWNA----------------------------------------MLTGFFQNGELNRAEK 102
S NA +L+ + + G + A K
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
LF + + D +TW M++GY Q GL EE+L F +M ++G L P+ TF ++L + S
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFSSLLPSVSKFE 354
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
+L +QIH I + + + SALI+ Y KC + +A+ IF D++ + M
Sbjct: 355 NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ--CNSVDVVVFTAM 412
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
I+ Y H+G +++ +F + ++ N++T V +L + G + ++K +
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK-KG 471
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGC----NVHGNADI- 337
+ + ++D+ + GR+ A+ I E L K + W ++ C N DI
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 338 ----------------------GKLVAKKILKVEH---------ENAGTYSLLSNMYASV 366
L ++ K H + + S L +MYA
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590
Query: 367 GKWKEAANVRMKMKDKGL 384
G K A NV MK+K +
Sbjct: 591 GNLKAAMNVFKTMKEKNI 608
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 95 GELNRAEKLF--AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFV 152
G + K+F +L + + W S+++ + ++GL +AL + KM G+ P+ TF
Sbjct: 84 GSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLC-FGVSPDVSTFP 142
Query: 153 TVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR 212
++ AC L + + +S G N V S+LI Y + G++ + K+FD L
Sbjct: 143 CLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVL-- 200
Query: 213 QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ 272
Q+D + WN M+ YA G + I F+ M+ N VT+ +L+ C+ L+D G+Q
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ 260
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%)
Query: 154 VLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ 213
+L ACS L +G+Q+H + ++ ++ MY+ CG K+F LR+
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 214 RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTAC 261
+ WN +I+++ +G N+A+ + KM G + T+ L+ AC
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 224/415 (53%), Gaps = 42/415 (10%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
D++ +++ +K G ++++ LF +P ++ W +MI+G+ + L EA+ LF M
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML 543
Query: 77 ------------------------P--------------ERDMASWNAMLTGFFQNGELN 98
P ++ M +A++ + + G L
Sbjct: 544 DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLK 603
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
A +++ LP+ D ++ +S+++GY+QHGL ++ +F M +G ++ ++L A
Sbjct: 604 LARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG-FTMDSFAISSILKAA 662
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ + G Q+H I+K G V S+L+ MYSK G + K F + DLI+
Sbjct: 663 ALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQ--INGPDLIA 720
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
W +IA+YA HG NEA+ ++N M+E GF+ + VT+V +L+ACSH GLV+E + + ++
Sbjct: 721 WTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV 780
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
K+ I+ + HY C+VD GR+GRL+EA I + +K VWG LLA C +HG ++G
Sbjct: 781 KDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELG 840
Query: 339 KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWI 393
K+ AKK +++E +AG Y LSN+ A VG+W E R MK G++K+PG S +
Sbjct: 841 KVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 169/351 (48%), Gaps = 49/351 (13%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------ 76
+ ++D +K+ R +DA +F NV WN +I G +N+ +LF M
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 77 PE--------------------------------RDMASWNAMLTGFFQNGELNRAEKLF 104
P+ D+ A++ + + G + A ++F
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 105 AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
+ +P V++WT M++GY + + AL++F +M+ + G++ NN T +V+ AC + +
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR-HSGVEINNCTVTSVISACGRPSMV 367
Query: 165 TEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIA 224
E Q+H + K+GF ++ V +ALI+MYSK G++ ++ ++F+D QR I N MI
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMIT 426
Query: 225 AYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA--CSHAGLVDEGIQYFDKLLKNRS 282
+++ +AI LF +M + G + ++ + LL+ C + G G L+ + +
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLT 486
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ + L L + G L+E++ + +G+ K + + W +++G N +G
Sbjct: 487 VG------SSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYG 530
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 22/280 (7%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N T Q L L F+ + + SW + +G + A KLF +PQ DV+
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVV 116
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
+ M++GY QH L EE+L+ F+KM G + N ++ +V+ ACS L + + +
Sbjct: 117 SCNIMISGYKQHRLFEESLRFFSKMHFL-GFEANEISYGSVISACSALQAPLFSELVCCH 175
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIA-AYAHHGYG 232
K G+ V SALI+++SK A K+F D L ++ WN +IA A + YG
Sbjct: 176 TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSL--SANVYCWNTIIAGALRNQNYG 233
Query: 233 NEAINLFNKMQELGFQAND-VTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV-KEDHY 290
+LF++M +GFQ D TY +L AC+ E ++ F K+++ R I+ ED +
Sbjct: 234 -AVFDLFHEMC-VGFQKPDSYTYSSVLAACASL----EKLR-FGKVVQARVIKCGAEDVF 286
Query: 291 AC--LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
C +VDL + G + EA + + S+ W +L+G
Sbjct: 287 VCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVMLSG 325
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 241/419 (57%), Gaps = 24/419 (5%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGYAQNRR 65
F+QM ER+V SWTTM+ S DDA ++F M N V++ +I N +
Sbjct: 333 VFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQ 387
Query: 66 LDEALELFERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
+ E L++ + S N+ +T + + L A+K F ++ +++I+W +M++G
Sbjct: 388 IKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISG 447
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA--SLTEGQQIHQLISKTGF 179
+AQ+G S EALKMF + A PN TF +VL A + S+ +GQ+ H + K G
Sbjct: 448 FAQNGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGL 505
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
V SAL++MY+K G + + K+F++ + Q++ W +I+AY+ HG +NLF
Sbjct: 506 NSCPVVSSALLDMYAKRGNIDESEKVFNE--MSQKNQFVWTSIISAYSSHGDFETVMNLF 563
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGR 299
+KM + + VT++ +LTAC+ G+VD+G + F+ +++ +++ +HY+C+VD+ GR
Sbjct: 564 HKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGR 623
Query: 300 AGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLL 359
AGRLKEA ++ + S+ +L C +HGN +G VA+ ++++ E +G+Y +
Sbjct: 624 AGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQM 683
Query: 360 SNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGN-----TVQVFVVGDKSHSQSE 413
N+YA +W +AA +R M+ K + K+ G SWI+VG+ T+Q F GDKSH +S+
Sbjct: 684 YNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSD 742
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 180/358 (50%), Gaps = 30/358 (8%)
Query: 5 RGCTMAFNQMQERDVSSWTTMVDGLAKSGRID-DARALFDRMPLRNV----VSWNAMITG 59
RG F++M +D+ SW +++ GL++ G +A +F M V VS+ ++IT
Sbjct: 226 RGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITT 285
Query: 60 YAQNRRLDEALEL----FERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITW 115
L A ++ +R E + N +++ + + G L + +F ++ +++V++W
Sbjct: 286 CCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSW 345
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
T+M++ ++A+ +F M+ + G+ PN TFV ++ A + EG +IH L
Sbjct: 346 TTMISSN-----KDDAVSIFLNMRFD-GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCI 399
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEA 235
KTGF V ++ I +Y+K L A+K F+D + R++ISWN MI+ +A +G+ +EA
Sbjct: 400 KTGFVSEPSVGNSFITLYAKFEALEDAKKAFED--ITFREIISWNAMISGFAQNGFSHEA 457
Query: 236 INLF-NKMQELGFQANDVTYVELLTACSHAG--LVDEGIQYFDKLLK---NRSIQVKEDH 289
+ +F + E N+ T+ +L A + A V +G + LLK N V
Sbjct: 458 LKMFLSAAAET--MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--- 512
Query: 290 YACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILK 347
+ L+D+ + G + E+ + + K VW +++ + HG+ + + K++K
Sbjct: 513 -SALLDMYAKRGNIDESEKVFNEMSQKNQF-VWTSIISAYSSHGDFETVMNLFHKMIK 568
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 138/279 (49%), Gaps = 45/279 (16%)
Query: 31 KSGRIDDARALFDRMPLRNVVSWNAMITGYAQNR-------RLDEALELFERMP------ 77
K+GR D+A +F+ + +VVSWN +++G+ N+ R+ A +F+
Sbjct: 123 KAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALS 182
Query: 78 -----------------------ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVIT 114
E D+ N+ +T + ++G A ++F E+ KD+I+
Sbjct: 183 FCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMIS 242
Query: 115 WTSMMTGYAQHG-LSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
W S+++G +Q G EA+ +F M G ++ ++ +F +V+ C L +QIH L
Sbjct: 243 WNSLLSGLSQEGTFGFEAVVIFRDMMREG-VELDHVSFTSVITTCCHETDLKLARQIHGL 301
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
K G++ V + L++ YSKCG L + +F + +R+++SW MI++ +
Sbjct: 302 CIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ--MSERNVVSWTTMISSNK-----D 354
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ 272
+A+++F M+ G N+VT+V L+ A + EG++
Sbjct: 355 DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK 393
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 97/180 (53%), Gaps = 7/180 (3%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
NA++ + + G + A +F L DV++W ++++G+ + + AL +M++ G+
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKS-AGV 170
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
+ T+ T L C G G Q+ + KTG + + V ++ I MYS+ G AR+
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHG-YGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
+FD+ + +D+ISWN +++ + G +G EA+ +F M G + + V++ ++T C H
Sbjct: 231 VFDE--MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 30/246 (12%)
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEE--------ALKMFTKMQANG--GLKPNNG 149
A KLF Q++ T + H +SE AL +F + G G +
Sbjct: 27 AHKLFDGSSQRNATTSIN-------HSISESLRRNSPARALSIFKENLQLGYFGRHMDEV 79
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
T L AC G L G QIH + +GF V +A++ MY K G A IF++
Sbjct: 80 TLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFEN- 136
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
L D++SWN +++ + + A+N +M+ G + TY L+ C +
Sbjct: 137 -LVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL 192
Query: 270 GIQYFDKLLKN--RSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLA 327
G+Q ++K S V + + + + R+G + A + + + K +S W LL+
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSF---ITMYSRSGSFRGARRVFDEMSFKDMIS-WNSLLS 248
Query: 328 GCNVHG 333
G + G
Sbjct: 249 GLSQEG 254
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 239/441 (54%), Gaps = 48/441 (10%)
Query: 13 QMQERDVSSWTTMVDGL----AKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDE 68
++ +R + S +T+ L +K G DA +F M +++V+W ++I+G +N + E
Sbjct: 398 ELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKE 457
Query: 69 ALELFERM--------PERDM--------ASWNAMLTGFFQNGELNR------------- 99
AL++F M P+ D+ A A+ G +G + +
Sbjct: 458 ALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSL 517
Query: 100 ------------AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPN 147
A K+F + ++++ W SM++ Y+++ L E ++ +F M + G + P+
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-IFPD 576
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD 207
+ + +VL A S ASL +G+ +H + G +T + +ALI+MY KCG A IF
Sbjct: 577 SVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 208 DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
++ + LI+WN MI Y HG A++LF++M++ G +DVT++ L++AC+H+G V
Sbjct: 637 K--MQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFV 694
Query: 268 DEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLA 327
+EG F+ + ++ I+ +HYA +VDL GRAG L+EA+ I+ + ++ S+W LL+
Sbjct: 695 EEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLS 754
Query: 328 GCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQ 387
H N ++G L A+K+L++E E TY L N+Y G EAA + MK+KGL KQ
Sbjct: 755 ASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQ 814
Query: 388 PGCSWIEVGNTVQVFVVGDKS 408
PGCSWIEV + VF G S
Sbjct: 815 PGCSWIEVSDRTNVFFSGGSS 835
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 160/355 (45%), Gaps = 54/355 (15%)
Query: 23 TTMVDGLAKSGRIDDARALFDR-------MPLRNVVSWNAMITGYAQNRRLDEALELFER 75
T++V+ K G +D A +FD + R+V WN+MI GY + RR E + F R
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRR 158
Query: 76 M----PERDMASWNAMLTGFFQNGELNRAE------------------------------ 101
M D S + +++ + G R E
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKF 218
Query: 102 -------KLFAELPQK-DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVT 153
++F E+ K +V+ W M+ G+ G+ E +L ++ + N +K + +F
Sbjct: 219 GLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTG 277
Query: 154 VLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ 213
LGACS + G+QIH + K G + V ++L++MYSKCG + A +F +
Sbjct: 278 ALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFS--CVVD 335
Query: 214 RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQY 273
+ L WN M+AAYA + YG A++LF M++ + T +++ CS GL + G
Sbjct: 336 KRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSV 395
Query: 274 FDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+L K R IQ + L+ L + G +A+ + + + K + WG L++G
Sbjct: 396 HAELFK-RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISG 448
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 167/339 (49%), Gaps = 21/339 (6%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKS----------GRIDDARALFDRMPLRNVVSWNAMITG 59
F+ + ++ + W MV A++ G + L D L NV+S +++
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 60 YAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
Y + + ELF+R + +A+LT + + G A +F + +KD++ W S++
Sbjct: 389 YNYGKSVHA--ELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLI 446
Query: 120 TGYAQHGLSEEALKMFTKMQANG-GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG 178
+G ++G +EALK+F M+ + LKP++ +V AC+GL +L G Q+H + KTG
Sbjct: 447 SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTG 506
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
N V S+LI++YSKCG +A K+F + ++++WN MI+ Y+ + +I+L
Sbjct: 507 LVLNVFVGSSLIDLYSKCGLPEMALKVFTS--MSTENMVAWNSMISCYSRNNLPELSIDL 564
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA--CLVDL 296
FN M G + V+ +L A S + +G L+ + + D + L+D+
Sbjct: 565 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR---LGIPSDTHLKNALIDM 621
Query: 297 CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
+ G K A I + + K SL W ++ G HG+
Sbjct: 622 YVKCGFSKYAENIFKKMQHK-SLITWNLMIYGYGSHGDC 659
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 8/212 (3%)
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
Q G +AL +++K + + TF ++L ACS L +L+ G+ IH + G++ +
Sbjct: 36 QKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDP 95
Query: 184 RVVSALINMYSKCGELHIARKIFD-----DGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
+ ++L+NMY KCG L A ++FD + RD+ WN MI Y E +
Sbjct: 96 FIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGC 155
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLV--DEGIQYFDKLLKNRSIQVKEDHYACLVDL 296
F +M G + + + +++ G +EG Q +L+N S+ L+D+
Sbjct: 156 FRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLDTDSFLKTALIDM 214
Query: 297 CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ G +A+ + + K ++ +W ++ G
Sbjct: 215 YFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 229/415 (55%), Gaps = 40/415 (9%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM------P----LRNVVSWNAMITG- 59
F+Q+ E+D+ SW TM+DG + ++D+A + M P + +++S +A G
Sbjct: 262 FDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGS 321
Query: 60 ----------------------------YAQNRRLDEALELFERMPERDMASWNAMLTGF 91
YA + + AL+ FE + +AS NA++ GF
Sbjct: 322 SKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGF 381
Query: 92 FQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
+NG + +A ++F + KD+ +W +M++GYAQ + AL +F +M ++ +KP+ T
Sbjct: 382 VKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITM 441
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL 211
V+V A S L SL EG++ H ++ + N + +A+I+MY+KCG + A IF
Sbjct: 442 VSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKN 501
Query: 212 RQRDLIS-WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
IS WN +I A HG+ A++L++ +Q L + N +T+V +L+AC HAGLV+ G
Sbjct: 502 ISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELG 561
Query: 271 IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCN 330
YF+ + + I+ HY C+VDL G+AGRL+EA +I+ + VK + +WG LL+
Sbjct: 562 KTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASR 621
Query: 331 VHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
HGN +I +L A ++ ++ + G +LSN+YA G+W++ A VR +M+ + ++
Sbjct: 622 THGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 180/431 (41%), Gaps = 106/431 (24%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F + D +S+ MVDG +S R+ DA LFD MP R+ VS+ +I GYAQN + EA+
Sbjct: 99 FRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAM 158
Query: 71 ELFERMP-------ERDMAS-----------WNA---------------------MLTGF 91
ELF M E +A+ W+ +L +
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 92 FQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG--------- 142
L A KLF E+P+++++TW M+ GY++ GL E+A ++F ++
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 143 ---------------------GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF-- 179
G+KP+ V +L A + ++G Q+H I K GF
Sbjct: 279 GCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDC 338
Query: 180 -----------------------------QENTRVVSALINMYSKCGELHIARKIFDDGL 210
+++ +ALI + K G + AR++FD
Sbjct: 339 YDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT- 397
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDE 269
+D+ SWN MI+ YA A++LF +M + + +T V + +A S G ++E
Sbjct: 398 -HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEE 456
Query: 270 GIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLG--VKLSLSVWGPLLA 327
G + D L +I ++ A ++D+ + G ++ A I ++S W ++
Sbjct: 457 GKRAHD-YLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIIC 515
Query: 328 GCNVHGNADIG 338
G HG+A +
Sbjct: 516 GSATHGHAKLA 526
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 129/226 (57%), Gaps = 7/226 (3%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N+++ YA+ R L +A +F + D AS+N M+ G+ ++ L A KLF +P++ +
Sbjct: 80 NSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCV 139
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
++T+++ GYAQ+ EA+++F +M+ N G+ N T TV+ ACS L + + + + L
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMR-NLGIMLNEVTLATVISACSHLGGIWDCRMLQSL 198
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
K + V + L++MY C L ARK+FD+ + +R+L++WN M+ Y+ G
Sbjct: 199 AIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDE--MPERNLVTWNVMLNGYSKAGLIE 256
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
+A LF+++ E + V++ ++ C +DE + Y+ ++L+
Sbjct: 257 QAEELFDQITE----KDIVSWGTMIDGCLRKNQLDEALVYYTEMLR 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 29/159 (18%)
Query: 136 TKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSK 195
T +G V+ LG+C+ +T G+QIH + K+G N + ++++NMY+K
Sbjct: 29 THFDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAK 88
Query: 196 CGELHIARKIFD--------------DGLLRQRDL---------------ISWNGMIAAY 226
C L A +F DG +R R L +S+ +I Y
Sbjct: 89 CRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGY 148
Query: 227 AHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
A + +EA+ LF +M+ LG N+VT +++ACSH G
Sbjct: 149 AQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLG 187
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 228/410 (55%), Gaps = 12/410 (2%)
Query: 15 QERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV-----VSWNAMITGYAQNRRLDEA 69
+ S W ++ G + S ++ ++RM L +V ++N + + + + +
Sbjct: 67 SDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 70 LELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQH 125
LE+ + D +++ + NG + A K+F E+P +D+++W M+ ++
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHV 186
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
GL +AL M+ +M N G+ ++ T V +L +C+ +++L G +H++ + V
Sbjct: 187 GLHNQALSMYKRM-GNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFV 245
Query: 186 VSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
+ALI+MY+KCG L A +F+ +R+RD+++WN MI Y HG+G EAI+ F KM
Sbjct: 246 SNALIDMYAKCGSLENAIGVFNG--MRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303
Query: 246 GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKE 305
G + N +T++ LL CSH GLV EG+++F+ + + HY C+VDL GRAG+L+
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363
Query: 306 AFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYAS 365
+ +I +W LL C +H N ++G++ KK++++E NAG Y L++++Y++
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
Query: 366 VGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEML 415
+ A++R ++ L+ PG SWIE+G+ V FVV DK H +S ++
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVI 473
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVV----SWNAMITGYAQNRR 65
F++M RD+ SW M+ + G + A +++ RM V + A+++ A
Sbjct: 164 VFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSA 223
Query: 66 LDEALELFERMPERDMASW----NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
L+ + L + S NA++ + + G L A +F + ++DV+TW SM+ G
Sbjct: 224 LNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIG 283
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI-SKTGFQ 180
Y HG EA+ F KM A+ G++PN TF+ +L CS + EG + +++ S+
Sbjct: 284 YGVHGHGVEAISFFRKMVAS-GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLT 342
Query: 181 ENTRVVSALINMYSKCGEL 199
N + ++++Y + G+L
Sbjct: 343 PNVKHYGCMVDLYGRAGQL 361
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 225/426 (52%), Gaps = 42/426 (9%)
Query: 30 AKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPE----------- 78
K G I DAR LFD +P RN+ S+ ++I+G+ EA ELF+ M E
Sbjct: 169 VKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFA 228
Query: 79 ---RDMASWNAMLTG-------------------------FFQNGELNRAEKLFAELPQK 110
R A ++ G + + G++ A F +P+K
Sbjct: 229 VMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEK 288
Query: 111 DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQI 170
+ W +++ GYA HG SEEAL + M+ + G+ + T ++ + LA L +Q
Sbjct: 289 TTVAWNNVIAGYALHGYSEEALCLLYDMR-DSGVSIDQFTLSIMIRISTKLAKLELTKQA 347
Query: 171 HQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
H + + GF+ +AL++ YSK G + AR +FD L ++++ISWN ++ YA+HG
Sbjct: 348 HASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDK--LPRKNIISWNALMGGYANHG 405
Query: 231 YGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
G +A+ LF KM N VT++ +L+AC+++GL ++G + F + + I+ + HY
Sbjct: 406 RGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHY 465
Query: 291 ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH 350
AC+++L GR G L EA I +K ++++W LL C + N ++G++VA+K+ +
Sbjct: 466 ACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGP 525
Query: 351 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHS 410
E G Y ++ NMY S+GK EAA V ++ KGL P C+W+EVG+ F+ GD+ S
Sbjct: 526 EKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDS 585
Query: 411 QSEMLE 416
+E ++
Sbjct: 586 YNETVK 591
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 165/345 (47%), Gaps = 41/345 (11%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLR-----NVVSWNAMITGYAQNRRLDEALELFERM-- 76
+ ++ L R +A LF+ + +R V +++A++ + + + ++ M
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 77 ----PERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEAL 132
PE+ M N +L + G + A +LF E+P++++ ++ S+++G+ G EA
Sbjct: 152 NGFEPEQYMM--NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAF 209
Query: 133 KMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINM 192
++F KM TF +L A +GL S+ G+Q+H K G +NT V LI+M
Sbjct: 210 ELF-KMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDM 268
Query: 193 YSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDV 252
YSKCG++ AR F+ + ++ ++WN +IA YA HGY EA+ L M++ G +
Sbjct: 269 YSKCGDIEDARCAFE--CMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQF 326
Query: 253 TYVEL-----------LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAG 301
T + LT +HA L+ G + +++ N + LVD + G
Sbjct: 327 TLSIMIRISTKLAKLELTKQAHASLIRNGFE--SEIVANTA----------LVDFYSKWG 374
Query: 302 RLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN-ADIGKLVAKKI 345
R+ A Y+ + L K +S W L+ G HG D KL K I
Sbjct: 375 RVDTARYVFDKLPRKNIIS-WNALMGGYANHGRGTDAVKLFEKMI 418
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 27/131 (20%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
E ++ + T +VD +K GR+D AR +FD++P +N++SWNA++ GYA + R +A++LFE+
Sbjct: 357 ESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEK 416
Query: 76 MPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMF 135
M ++A + +T+ ++++ A GLSE+ ++F
Sbjct: 417 MIAANVAP---------------------------NHVTFLAVLSACAYSGLSEQGWEIF 449
Query: 136 TKMQANGGLKP 146
M G+KP
Sbjct: 450 LSMSEVHGIKP 460
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 222/412 (53%), Gaps = 43/412 (10%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP----E 78
T+++D K G I +AR +F+ ++V W AMI GY N ++EAL LF++M +
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 79 RDMASWNAMLTG--FFQNGELNR--------------------------------AEKLF 104
+ + ++L+G +N EL R A+ +F
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVF 400
Query: 105 AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
+KD++ W S+++G++Q+G EAL +F +M + + PN T ++ AC+ L SL
Sbjct: 401 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSES-VTPNGVTVASLFSACASLGSL 459
Query: 165 TEGQQIHQLISKTGF--QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
G +H K GF + V +AL++ Y+KCG+ AR IFD + +++ I+W+ M
Sbjct: 460 AVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT--IEEKNTITWSAM 517
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
I Y G ++ LF +M + + N+ T+ +L+AC H G+V+EG +YF + K+ +
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVA 342
HY C+VD+ RAG L++A IIE + ++ + +G L GC +H D+G++V
Sbjct: 578 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 637
Query: 343 KKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIE 394
KK+L + ++A Y L+SN+YAS G+W +A VR MK +GL K G S +E
Sbjct: 638 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 188/385 (48%), Gaps = 57/385 (14%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDM- 81
T ++D AK G I A +F+ + LRNVV W +MI GY +N +E L LF RM E ++
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 82 ---------------------ASW-----------------NAMLTGFFQNGELNRAEKL 103
W ++L + + G+++ A ++
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F E D++ WT+M+ GY +G EAL +F KM+ +KPN T +VL C + +
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV-EIKPNCVTIASVLSGCGLIEN 358
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
L G+ +H L K G + T V +AL++MY+KC + A+ +F+ + ++D+++WN +I
Sbjct: 359 LELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFE--MESEKDIVAWNSII 415
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ---YFDKL--L 278
+ ++ +G +EA+ LF++M N VT L +AC+ G + G Y KL L
Sbjct: 416 SGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFL 475
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
+ S+ V L+D + G + A I + + K +++ W ++ G G+ IG
Sbjct: 476 ASSSVHVG----TALLDFYAKCGDPQSARLIFDTIEEKNTIT-WSAMIGGYGKQGDT-IG 529
Query: 339 --KLVAKKILKVEHENAGTY-SLLS 360
+L + + K + N T+ S+LS
Sbjct: 530 SLELFEEMLKKQQKPNESTFTSILS 554
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 44/289 (15%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFE--- 74
D+S T +V G DAR +FD++P + W M+ Y N+ E ++L++
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 75 -----------------------------------RMPERDMASWNAMLTGFFQNGELNR 99
++P D +L + + GE+
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKS 194
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS 159
A K+F ++ ++V+ WTSM+ GY ++ L EE L +F +M+ N L N T+ T++ AC+
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG-NEYTYGTLIMACT 253
Query: 160 GLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISW 219
L++L +G+ H + K+G + ++ +V++L++MY KCG++ AR++F++ DL+ W
Sbjct: 254 KLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH--SHVDLVMW 311
Query: 220 NGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVD 268
MI Y H+G NEA++LF KM+ + + N VT +L+ C GL++
Sbjct: 312 TAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIE 357
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 125/269 (46%), Gaps = 15/269 (5%)
Query: 2 WEDRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMI 57
+++R F E+D+ +W +++ G +++G I +A LF RM +V V+ ++
Sbjct: 391 YQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLF 450
Query: 58 TGYAQNRRLDEALELFER------MPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKD 111
+ A L L + + A+L + + G+ A +F + +K+
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510
Query: 112 VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIH 171
ITW++M+ GY + G + +L++F +M KPN TF ++L AC + EG++
Sbjct: 511 TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ-KPNESTFTSILSACGHTGMVNEGKKYF 569
Query: 172 QLISKT-GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
+ K F +T+ + +++M ++ GEL A I + + Q D+ + + H
Sbjct: 570 SSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEK-MPIQPDVRCFGAFLHGCGMHS 628
Query: 231 YGNEAINLFNKMQELGFQANDVTYVELLT 259
+ + KM +L +D +Y L++
Sbjct: 629 RFDLGEIVIKKMLDL--HPDDASYYVLVS 655
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 154 VLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ 213
+L C+ + SL +Q H +++ G + + + L+++Y G AR +FD + +
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQ--IPE 104
Query: 214 RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQY 273
D W M+ Y + E + L++ + + GF+ +D+ + + L AC+ +D G +
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 274 FDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+L+K S L+D+ + G +K A + + ++ ++ W ++AG
Sbjct: 165 HCQLVKVPSFD--NVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIAG 216
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 223/411 (54%), Gaps = 7/411 (1%)
Query: 22 WTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRLDEALELFERMP 77
++ +V A G ID R + + V ++++ YA+ L+ A +F+ +
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR 167
Query: 78 ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTK 137
++ SW AM++G+ ++G A +LF LP K++ +WT++++G+ Q G EA +FT+
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 227
Query: 138 MQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCG 197
M+ + +++GAC+ LA+ G+Q+H L+ GF + +ALI+MY+KC
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287
Query: 198 ELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
++ A+ IF +R RD++SW +I A HG +A+ L++ M G + N+VT+V L
Sbjct: 288 DVIAAKDIFSR--MRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGL 345
Query: 258 LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKL 317
+ ACSH G V++G + F + K+ I+ HY CL+DL GR+G L EA +I +
Sbjct: 346 IYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPP 405
Query: 318 SLSVWGPLLAGCNVHGNADIGKLVAKKIL-KVEHENAGTYSLLSNMYASVGKWKEAANVR 376
W LL+ C G +G +A ++ + ++ TY LLSN+YAS W + + R
Sbjct: 406 DEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 465
Query: 377 MKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMK 427
K+ + ++K PG S +EV +VF G+ SH E + LL L +M+
Sbjct: 466 RKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMR 516
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 150/311 (48%), Gaps = 78/311 (25%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F+ ++ ++ SWT MV G AKSGR ++A LF +P++N+ SW A+I+G+ Q+ + EA
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 71 ELFERM-PER-----------------DMAS----------------------WNAMLTG 90
+F M ER ++A+ NA++
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDM 282
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ + ++ A+ +F+ + +DV++WTS++ G AQHG +E+AL ++ M ++ G+KPN T
Sbjct: 283 YAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSH-GVKPNEVT 341
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGELHIARKIFDDG 209
FV ++ ACS + + +G+++ Q ++K G + + + + L+++ + G L
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL---------- 391
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
+EA NL + M F ++ T+ LL+AC G
Sbjct: 392 -----------------------DEAENLIHTMP---FPPDEPTWAALLSACKRQGRGQM 425
Query: 270 GIQYFDKLLKN 280
GI+ D L+ +
Sbjct: 426 GIRIADHLVSS 436
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 118/225 (52%), Gaps = 10/225 (4%)
Query: 61 AQNRRLDEALELFERMPERDMASW----NAMLTGFFQNGELNRAEKLFAELPQKDVITWT 116
A+NR L A L + + + N ++ + + G + A ++F E+P +D I W
Sbjct: 14 ARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWA 73
Query: 117 SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK 176
S++T Q LS + L +F+ + ++ GL+P++ F ++ AC+ L S+ G+Q+H
Sbjct: 74 SVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIV 133
Query: 177 TGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAI 236
+ + + V S+L++MY+KCG L+ A+ +FD +R ++ ISW M++ YA G EA+
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDS--IRVKNTISWTAMVSGYAKSGRKEEAL 191
Query: 237 NLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNR 281
LF + N ++ L++ +G E F ++ + R
Sbjct: 192 ELFRILP----VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 232
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 8/227 (3%)
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
L C+ +LT + +H I K G + + + L+N+Y KCG A ++FD+ + R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDE--MPHR 67
Query: 215 DLISWNGMIAAYAHHGY-GNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQY 273
D I+W ++ A G + G + +D + L+ AC++ G +D G Q
Sbjct: 68 DHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Query: 274 FDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ + E + LVD+ + G L A + + + VK ++S W +++G G
Sbjct: 128 HCHFIVSEYAN-DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTIS-WTAMVSGYAKSG 185
Query: 334 NADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
+ L +IL V +N +++ L + + GK EA +V +M+
Sbjct: 186 RKE-EALELFRILPV--KNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRL 66
F++M+ RDV SWT+++ G+A+ G+ + A AL+D M V V++ +I + +
Sbjct: 296 FSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFV 355
Query: 67 DEALELFERMPE-----RDMASWNAMLTGFFQNGELNRAEKLFAELP-QKDVITWTSMMT 120
++ ELF+ M + + + +L ++G L+ AE L +P D TW ++++
Sbjct: 356 EKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
Query: 121 GYAQHGLSEEALKMFTKMQANGGLK-PNNGTFVTVLGACSGL 161
+ G + +++ + ++ LK P+ ++ + A + L
Sbjct: 416 ACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 228/428 (53%), Gaps = 41/428 (9%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER---- 79
T++D +K F RM ++++SW +I GYAQN EALELF + ++
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 80 ----------------------------------DMASWNAMLTGFFQNGELNRAEKLFA 105
D N ++ + + + A ++F
Sbjct: 486 DEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFE 545
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ KDV++WTSM++ A +G EA+++F +M GL ++ + +L A + L++L
Sbjct: 546 SIKGKDVVSWTSMISSSALNGNESEAVELFRRM-VETGLSADSVALLCILSAAASLSALN 604
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
+G++IH + + GF + A+++MY+ CG+L A+ +FD + ++ L+ + MI A
Sbjct: 605 KGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDR--IERKGLLQYTSMINA 662
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
Y HG G A+ LF+KM+ + ++++ LL ACSHAGL+DEG + + ++
Sbjct: 663 YGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEP 722
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
+HY CLVD+ GRA + EAF ++ + + + VW LLA C H +IG++ A+++
Sbjct: 723 WPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRL 782
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVG 405
L++E +N G L+SN++A G+W + VR KMK G++K PGCSWIE+ V F
Sbjct: 783 LELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTAR 842
Query: 406 DKSHSQSE 413
DKSH +S+
Sbjct: 843 DKSHPESK 850
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 132/271 (48%), Gaps = 10/271 (3%)
Query: 61 AQNRRLDEALELFERMPERDMASWNAMLTGFF-QNGELNRAEKLFAELPQKDVITWTSMM 119
+Q R+L +F+ P ++ L + + G L+ AEK+F E+P + W +M+
Sbjct: 97 SQGRQLHS--RIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMI 154
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
Y +G AL ++ M+ G + +F +L AC+ L + G ++H L+ K G+
Sbjct: 155 GAYVSNGEPASALALYWNMRVEG-VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGY 213
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
+V+AL++MY+K +L AR++F DG + D + WN ++++Y+ G E + LF
Sbjct: 214 HSTGFIVNALVSMYAKNDDLSAARRLF-DGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC--LVDLC 297
+M G N T V LTAC G + +LK+ + + Y C L+ +
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS--SELYVCNALIAMY 330
Query: 298 GRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
R G++ +A I+ + + W L+ G
Sbjct: 331 TRCGKMPQAERILRQMN-NADVVTWNSLIKG 360
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 133/260 (51%), Gaps = 13/260 (5%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVV----SWNAMITGYAQNRRL 66
F++M +R +W TM+ +G A AL+ M + V S+ A++ A+ R +
Sbjct: 139 FDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI 198
Query: 67 DEALELFERMPERDMASW----NAMLTGFFQNGELNRAEKLFAELPQK-DVITWTSMMTG 121
EL + + S NA+++ + +N +L+ A +LF +K D + W S+++
Sbjct: 199 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
Y+ G S E L++F +M G PN+ T V+ L AC G + G++IH + K+
Sbjct: 259 YSTSGKSLETLELFREMHMTGP-APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 182 NT-RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFN 240
+ V +ALI MY++CG++ A +I + D+++WN +I Y + EA+ F+
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQ--MNNADVVTWNSLIKGYVQNLMYKEALEFFS 375
Query: 241 KMQELGFQANDVTYVELLTA 260
M G ++++V+ ++ A
Sbjct: 376 DMIAAGHKSDEVSMTSIIAA 395
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 166/346 (47%), Gaps = 40/346 (11%)
Query: 11 FNQMQER-DVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITG-----Y 60
F+ QE+ D W +++ + SG+ + LF M P N + + +T Y
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 61 AQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMT 120
A+ + A L ++ NA++ + + G++ +AE++ ++ DV+TW S++
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 121 GYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQ 180
GY Q+ + +EAL+ F+ M A G K + + +++ A L++L G ++H + K G+
Sbjct: 360 GYVQNLMYKEALEFFSDMIA-AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 181 ENTRVVSALINMYSKCG-ELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
N +V + LI+MYSKC ++ R + +DLISW +IA YA + EA+ LF
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLR---MHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 240 NKMQELGFQANDVTYVELLTACS-----------HAGLVDEGIQYFDKLLKNRSIQVKED 288
+ + + +++ +L A S H ++ +G+ D +++N
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL--LDTVIQNE------- 526
Query: 289 HYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
LVD+ G+ + A + E + K +S W +++ ++GN
Sbjct: 527 ----LVDVYGKCRNMGYATRVFESIKGKDVVS-WTSMISSSALNGN 567
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 120/287 (41%), Gaps = 41/287 (14%)
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKT--GFQENTRVVSALINMYSKCGELHIARKIFD 207
F VL C ++++G+Q+H I KT F+ + + L+ MY KCG L A K+FD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFD 140
Query: 208 DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
+ + R +WN MI AY +G A+ L+ M+ G ++ LL AC+ +
Sbjct: 141 E--MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDI 198
Query: 268 DEGIQYFDKLLKNRSIQVKEDHYA------CLVDLCGRAGRLKEAFYIIEGLGVKLSLSV 321
G + S+ VK +++ LV + + L A + +G K +
Sbjct: 199 RSGSEL-------HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 251
Query: 322 WGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKD 381
W +L+ + G + + L + + + +Y+++S + A
Sbjct: 252 WNSILSSYSTSGKS-LETLELFREMHMTGPAPNSYTIVSALTAC---------------- 294
Query: 382 KGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKK 428
G S+ ++G + V+ +HS + L+ ++T+ K
Sbjct: 295 ------DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGK 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Query: 8 TMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM----------PLRNVVSWNAMI 57
T F ++ +DV SWT+M+ A +G +A LF RM L ++S A +
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 58 TGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTS 117
+ + R + L E +A A++ + G+L A+ +F + +K ++ +TS
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAV--AVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
M+ Y HG + A+++F KM+ + + P++ +F+ +L ACS L EG+
Sbjct: 659 MINAYGMHGCGKAAVELFDKMR-HENVSPDHISFLALLYACSHAGLLDEGR 708
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 236/458 (51%), Gaps = 47/458 (10%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D + +V K I+ AR LFD M NVVSW ++I+GY + AL +F++M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 78 E----------------------------------------RDMASWNAMLTGFFQNGEL 97
E R++ ++++ + + ++
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 98 NRAEKLFAELPQ--KDVITWTSMMTGYAQHGLSEEALKMFTKMQAN-GGLKPNNGTFVTV 154
A ++F + ++V++WTSM+T YAQ+ EA+++F A + N +V
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
+ ACS L L G+ H L+++ G++ NT V ++L++MY+KCG L A KIF +R
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLR--IRCH 300
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
+IS+ MI A A HG G A+ LF++M N VT + +L ACSH+GLV+EG++Y
Sbjct: 301 SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYL 360
Query: 275 DKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL--GVKLSLSVWGPLLAGCNVH 332
+ + + HY C+VD+ GR GR+ EA+ + + + G + +WG LL+ +H
Sbjct: 361 SLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLH 420
Query: 333 GNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSW 392
G +I +K++++ + Y LSN YA G W+++ ++R++MK G K+ CSW
Sbjct: 421 GRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSW 480
Query: 393 IEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFG 430
IE ++V VF GD S +S +E L L +MK+ G
Sbjct: 481 IENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERG 518
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 36/177 (20%)
Query: 87 MLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
M GF QN L A LF +PQ + + H LSE FT +
Sbjct: 1 MKKGFIQNVHLAPATSLF--VPQYKNDFFHLKTKAFLVHKLSESTNAAFTNL-------- 50
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
+H L K GF +T V+ L+ Y K E++ ARK+F
Sbjct: 51 -----------------------LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLF 87
Query: 207 DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE-LGFQANDVTYVELLTACS 262
D+ + + +++SW +I+ Y G A+++F KM E N+ T+ + ACS
Sbjct: 88 DE--MCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACS 142
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 223/411 (54%), Gaps = 12/411 (2%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
DV ++VD +K G+++DAR +FD + ++V +WN+MITGY Q +A ELF RM
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 78 ERDM----ASWNAMLTGFFQNGELNRAEKLFAELP-----QKDVITWTSMMTGYAQHGLS 128
+ ++ +WN M++G+ +NG+ A LF + Q++ TW ++ GY Q+G
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
+EAL++F KMQ + + PN+ T +++L AC+ L ++IH + + V +A
Sbjct: 506 DEALELFRKMQFSRFM-PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNA 564
Query: 189 LINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
L + Y+K G++ +R IF + +D+I+WN +I Y HG A+ LFN+M+ G
Sbjct: 565 LTDTYAKSGDIEYSRTIFLG--METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT 622
Query: 249 ANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFY 308
N T ++ A G VDEG + F + + I +H + +V L GRA RL+EA
Sbjct: 623 PNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQ 682
Query: 309 IIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGK 368
I+ + ++ +W L GC +HG+ D+ A+ + +E EN T S++S +YA K
Sbjct: 683 FIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAK 742
Query: 369 WKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLL 419
+ +D LKK G SWIEV N + F GD+S +++L L+
Sbjct: 743 LGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLV 793
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 194/374 (51%), Gaps = 29/374 (7%)
Query: 30 AKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA----SWN 85
AK G +D A F RM R+V++WN+++ Y QN + +EA+EL + M + ++ +WN
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 86 AMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
++ G+ Q G+ + A L ++ DV TWT+M++G +G+ +AL MF KM
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL- 345
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
G+ PN T ++ + ACS L + +G ++H + K GF ++ V ++L++MYSKCG+L
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 202 ARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTAC 261
ARK+FD ++ +D+ +WN MI Y GY +A LF +MQ+ + N +T+ +++
Sbjct: 406 ARKVFDS--VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Query: 262 SHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSV 321
G E + F ++ K+ +Q + ++ + G+ EA + K+ S
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR----KMQFSR 519
Query: 322 WGP-------LLAGC-NVHGNA---DIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWK 370
+ P LL C N+ G +I V ++ L H + L++ YA G +
Sbjct: 520 FMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIH---AVKNALTDTYAKSGDIE 576
Query: 371 EAANVRMKMKDKGL 384
+ + + M+ K +
Sbjct: 577 YSRTIFLGMETKDI 590
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 107/205 (52%), Gaps = 3/205 (1%)
Query: 73 FERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEAL 132
F E D+ +L+ + + G + A K+F + ++++ TW++M+ Y++ E
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 133 KMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINM 192
K+F M +G L P++ F +L C+ + G+ IH ++ K G RV ++++ +
Sbjct: 167 KLFRLMMKDGVL-PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAV 225
Query: 193 YSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDV 252
Y+KCGEL A K F +R+RD+I+WN ++ AY +G EA+ L +M++ G V
Sbjct: 226 YAKCGELDFATKFFRR--MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 253 TYVELLTACSHAGLVDEGIQYFDKL 277
T+ L+ + G D + K+
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKM 308
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 174/431 (40%), Gaps = 94/431 (21%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F E DV T ++ AK G I DAR +FD M RN+ +W+AMI Y++ R E
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 71 ELFERM------PER-----------------------------DMASW----NAMLTGF 91
+LF M P+ M+S N++L +
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 92 FQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
+ GEL+ A K F + ++DVI W S++ Y Q+G EEA+++ +M+ G+ P T+
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE-GISPGLVTW 285
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL 211
++G + L + Q + G
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITA------------------------------ 315
Query: 212 RQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGI 271
D+ +W MI+ H+G +A+++F KM G N VT + ++ACS ++++G
Sbjct: 316 ---DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGS 372
Query: 272 Q---------YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
+ + D +L S LVD+ + G+L++A + + + K + W
Sbjct: 373 EVHSIAVKMGFIDDVLVGNS----------LVDMYSKCGKLEDARKVFDSVKNK-DVYTW 421
Query: 323 GPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKD 381
++ G C +L + N T++ + + Y G EA ++ +M+
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Query: 382 KGLKKQPGCSW 392
G ++ +W
Sbjct: 482 DGKVQRNTATW 492
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 114/238 (47%), Gaps = 15/238 (6%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQNRRLDEALE 71
+R+ ++W ++ G ++G+ D+A LF +M + N V+ +++ A E
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Query: 72 LFERMPERDM----ASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGL 127
+ + R++ A NA+ + ++G++ + +F + KD+ITW S++ GY HG
Sbjct: 546 IHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGS 605
Query: 128 SEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQI-HQLISKTGFQENTRVV 186
AL +F +M+ G+ PN GT +++ A + ++ EG+++ + + +
Sbjct: 606 YGPALALFNQMKTQ-GITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHC 664
Query: 187 SALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAI----NLFN 240
SA++ +Y + L A + + ++ I W + HG + AI NLF+
Sbjct: 665 SAMVYLYGRANRLEEALQFIQEMNIQSETPI-WESFLTGCRIHGDIDMAIHAAENLFS 721
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 232/446 (52%), Gaps = 45/446 (10%)
Query: 19 VSSWTTMVDGLAKSGRIDDARALFDRMPL--RNVVSWNAMITGYAQNRRLDEALELFERM 76
V+ T + K G +D A+ +F+ + R VVSWN+M Y+ +A L+ M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 77 ---------------------PE------------------RDMASWNAMLTGFFQNGEL 97
PE +D+ + N ++ + ++ +
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 98 NRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGA 157
A LF + + ++WT M++GYA+ G +EAL +F M G KP+ T ++++
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM-IKSGEKPDLVTLLSLISG 366
Query: 158 CSGLASLTEGQQIHQLISKTGFQ-ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
C SL G+ I G + +N + +ALI+MYSKCG +H AR IFD+ ++ +
Sbjct: 367 CGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT--PEKTV 424
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
++W MIA YA +G EA+ LF+KM +L ++ N +T++ +L AC+H+G +++G +YF
Sbjct: 425 VTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHI 484
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ + +I DHY+C+VDL GR G+L+EA +I + K +WG LL C +H N
Sbjct: 485 MKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVK 544
Query: 337 IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVG 396
I + A+ + +E + A Y ++N+YA+ G W A +R MK + +KK PG S I+V
Sbjct: 545 IAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVN 604
Query: 397 NTVQVFVVGDKSHSQSEMLEYLLLGL 422
F VG+ H ++E++ + L GL
Sbjct: 605 GKNHSFTVGEHGHVENEVIYFTLNGL 630
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 165/343 (48%), Gaps = 34/343 (9%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F +M ERD ++W M+ G +SG D A +LF M L + + + Q+ +++L
Sbjct: 110 FERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSL 169
Query: 71 ELFERM--------PERDMASWNAMLTGFFQNGELNRAEKLFAELPQKD--VITWTSMMT 120
+L E M + + N ++ + + G+L+ A+ +F + + D V++W SM
Sbjct: 170 KLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFK 229
Query: 121 GYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQ 180
Y+ G + +A ++ M KP+ TF+ + +C +LT+G+ IH G
Sbjct: 230 AYSVFGEAFDAFGLYCLMLRE-EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD 288
Query: 181 ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFN 240
++ ++ I+MYSK + AR +FD ++ R +SW MI+ YA G +EA+ LF+
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFD--IMTSRTCVSWTVMISGYAEKGDMDEALALFH 346
Query: 241 KMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC-------- 292
M + G + + VT + L++ C G ++ G + I + D Y C
Sbjct: 347 AMIKSGEKPDLVTLLSLISGCGKFGSLETG----------KWIDARADIYGCKRDNVMIC 396
Query: 293 --LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
L+D+ + G + EA I + K ++ W ++AG ++G
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEK-TVVTWTTMIAGYALNG 438
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 146/331 (44%), Gaps = 46/331 (13%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
A + F + ++ A K+F +P++D TW +M++G+ Q G +++A +F +M+ N +
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE-I 149
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
P++ T +T++ + S SL + +H + + G V + I+ Y KCG+L A+
Sbjct: 150 TPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKL 209
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+F+ R ++SWN M AY+ G +A L+ M F+ + T++ L +C +
Sbjct: 210 VFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNP 269
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDH-----------YACLVDLC---------------- 297
+ +G +L+ + +I + D Y+ D C
Sbjct: 270 ETLTQG-----RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS 324
Query: 298 --------GRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIGKLVAKK-- 344
G + EA + + G K L L++GC G+ + GK + +
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARAD 384
Query: 345 ILKVEHENAGTYSLLSNMYASVGKWKEAANV 375
I + +N + L +MY+ G EA ++
Sbjct: 385 IYGCKRDNVMICNALIDMYSKCGSIHEARDI 415
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 144/290 (49%), Gaps = 22/290 (7%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQNR 64
+ F+ M R SWT M+ G A+ G +D+A ALF M ++V+ ++I+G +
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 65 RLDEALELFERMP----ERD-MASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
L+ + R +RD + NA++ + + G ++ A +F P+K V+TWT+M+
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT-G 178
GYA +G+ EALK+F+KM + KPN+ TF+ VL AC+ SL +G + ++ +
Sbjct: 432 AGYALNGIFLEALKLFSKM-IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG----YGNE 234
S ++++ + G+L A ++ + + + D W ++ A H
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRN-MSAKPDAGIWGALLNACKIHRNVKIAEQA 549
Query: 235 AINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQ 284
A +LFN ++ YVE+ + AG+ D G ++K R+I+
Sbjct: 550 AESLFNLEPQMA-----APYVEMANIYAAAGMWD-GFARIRSIMKQRNIK 593
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSAL 189
E+L +F +M+ GG +PNN TF V AC+ LA + + +H + K+ F + V +A
Sbjct: 35 ESLLLFREMK-RGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 190 INMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQA 249
++M+ KC + A K+F+ + +RD +WN M++ + G+ ++A +LF +M+
Sbjct: 94 VDMFVKCNSVDYAAKVFER--MPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITP 151
Query: 250 NDVTYVELLTACS 262
+ VT + L+ + S
Sbjct: 152 DSVTVMTLIQSAS 164
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 201/352 (57%), Gaps = 8/352 (2%)
Query: 47 LRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAE 106
L ++ + N +I Y+ +D AL+LF+ P+RD+ ++N ++ G + E+ RA +LF
Sbjct: 149 LSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDS 208
Query: 107 LPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTE 166
+P +D+++W S+++GYAQ EA+K+F +M A GLKP+N V+ L AC+ +
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVA-LGLKPDNVAIVSTLSACAQSGDWQK 267
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAY 226
G+ IH + ++ + + L++ Y+KCG + A +IF+ L + L +WN MI
Sbjct: 268 GKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE--LCSDKTLFTWNAMITGL 325
Query: 227 AHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVK 286
A HG G ++ F KM G + + VT++ +L CSH+GLVDE FD++ + +
Sbjct: 326 AMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNRE 385
Query: 287 EDHYACLVDLCGRAGRLKEAFYIIEGL----GVKLSLSVWGPLLAGCNVHGNADIGKLVA 342
HY C+ DL GRAG ++EA +IE + G + L W LL GC +HGN +I + A
Sbjct: 386 MKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAA 445
Query: 343 KKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKM-KDKGLKKQPGCSWI 393
++ + E+ G Y ++ MYA+ +W+E VR + +DK +KK G S +
Sbjct: 446 NRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 134/280 (47%), Gaps = 46/280 (16%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++ +RDV ++ ++DGL K+ I AR LFD MPLR++VSWN++I+GYAQ EA+
Sbjct: 175 FDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAI 234
Query: 71 ELFERMP----ERDMASWNAMLTGFFQNGE------------------------------ 96
+LF+ M + D + + L+ Q+G+
Sbjct: 235 KLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFY 294
Query: 97 -----LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
++ A ++F K + TW +M+TG A HG E + F KM + G+KP+ TF
Sbjct: 295 AKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM-VSSGIKPDGVTF 353
Query: 152 VTVLGACSGLASLTEGQQIH-QLISKTGFQENTRVVSALINMYSKCGELHIARKIFD--- 207
++VL CS + E + + Q+ S + + ++ + G + A ++ +
Sbjct: 354 ISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMP 413
Query: 208 -DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG 246
DG R++ L++W+G++ HG A N+++ L
Sbjct: 414 KDGGNREK-LLAWSGLLGGCRIHGNIEIAEKAANRVKALS 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 33/272 (12%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
++ A +F + + +++ H S + K F + P+ TF V
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 157 ACSGLAS--LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD------- 207
AC+ + LT + +H + G + ++ LI +YS + A ++FD
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV 183
Query: 208 -------DGLLRQ---------------RDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
DGL++ RDL+SWN +I+ YA + EAI LF++M L
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVAL 243
Query: 246 GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKE 305
G + ++V V L+AC+ +G +G D K + + + LVD + G +
Sbjct: 244 GLKPDNVAIVSTLSACAQSGDWQKGKAIHD-YTKRKRLFIDSFLATGLVDFYAKCGFIDT 302
Query: 306 AFYIIEGLGVKLSLSVWGPLLAGCNVHGNADI 337
A I E K +L W ++ G +HGN ++
Sbjct: 303 AMEIFELCSDK-TLFTWNAMITGLAMHGNGEL 333
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 226/385 (58%), Gaps = 7/385 (1%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N M+ Y L EA +F M D+ +WN+M+ GF + G +++A+ LF E+PQ++ +
Sbjct: 165 NTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGV 224
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
+W SM++G+ ++G ++AL MF +MQ +KP+ T V++L AC+ L + +G+ IH+
Sbjct: 225 SWNSMISGFVRNGRFKDALDMFREMQEKD-VKPDGFTMVSLLNACAYLGASEQGRWIHEY 283
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
I + F+ N+ VV+ALI+MY KCG + +F+ +Q L WN MI A++G+
Sbjct: 284 IVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ--LSCWNSMILGLANNGFEE 341
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
A++LF++++ G + + V+++ +LTAC+H+G V ++F + + I+ HY +
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENA 353
V++ G AG L+EA +I+ + V+ +W LL+ C GN ++ K AK + K++ +
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDET 461
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQS- 412
Y LLSN YAS G ++EA R+ MK++ ++K+ GCS IEV V F+ +H +S
Sbjct: 462 CGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSA 521
Query: 413 ---EMLEYLLLGLHTKMKKFGDILD 434
+L+ L + T F ++ D
Sbjct: 522 EIYSLLDILNWDVSTIKSGFAELFD 546
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 44/307 (14%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
DV +W +M+ G AK G ID A+ LFD MP RN VSWN+MI+G+ +N R +AL++F M
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 78 ERDMAS----------------------W-----------------NAMLTGFFQNGELN 98
E+D+ W A++ + + G +
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
+F P+K + W SM+ G A +G E A+ +F++++ GL+P++ +F+ VL AC
Sbjct: 311 EGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELE-RSGLEPDSVSFIGVLTAC 369
Query: 159 SGLASLTEGQQIHQLI-SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI 217
+ + + +L+ K + + + + ++N+ G L A + + + + D +
Sbjct: 370 AHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKN-MPVEEDTV 428
Query: 218 SWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
W+ +++A G A +++L YV L A + GL +E ++ L
Sbjct: 429 IWSSLLSACRKIGNVEMAKRAAKCLKKLD-PDETCGYVLLSNAYASYGLFEEAVEQ-RLL 486
Query: 278 LKNRSIQ 284
+K R ++
Sbjct: 487 MKERQME 493
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 130/300 (43%), Gaps = 67/300 (22%)
Query: 61 AQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMT 120
A ++ A +F R+ ++ WN ++ GF
Sbjct: 69 ASPSDMNYAYLVFTRINHKNPFVWNTIIRGF----------------------------- 99
Query: 121 GYAQHGLSEEALKMFTKMQANG-GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
++ E A+ +F M + +KP T+ +V A L +G+Q+H ++ K G
Sbjct: 100 --SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157
Query: 180 QENTRVVSALINMY-------------------------------SKCGELHIARKIFDD 208
++++ + + +++MY +KCG + A+ +FD+
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217
Query: 209 GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVD 268
+ QR+ +SWN MI+ + +G +A+++F +MQE + + T V LL AC++ G +
Sbjct: 218 --MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
Query: 269 EGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+G + +++NR ++ L+D+ + G ++E + E K LS W ++ G
Sbjct: 276 QGRWIHEYIVRNR-FELNSIVVTALIDMYCKCGCIEEGLNVFE-CAPKKQLSCWNSMILG 333
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 238/435 (54%), Gaps = 11/435 (2%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQNRRL 66
F M E D+ + +M G ++ + +LF + L + ++ +++ A + L
Sbjct: 86 FEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 67 DEALEL----FERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
+E +L + + ++ ++ + + +++ A +F + + V+ + +M+TGY
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGY 205
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
A+ EAL +F +MQ LKPN T ++VL +C+ L SL G+ IH+ K F +
Sbjct: 206 ARRNRPNEALSLFREMQGKY-LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
+V +ALI+M++KCG L A IF+ +R +D +W+ MI AYA+HG +++ +F +M
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEK--MRYKDTQAWSAMIVAYANHGKAEKSMLMFERM 322
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
+ Q +++T++ LL ACSH G V+EG +YF +++ I HY +VDL RAG
Sbjct: 323 RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGN 382
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNM 362
L++A+ I+ L + + +W LLA C+ H N D+ + V+++I +++ + G Y +LSN+
Sbjct: 383 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNL 442
Query: 363 YASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGL 422
YA KW+ ++R MKD+ K PGCS IEV N V F GD S + L L +
Sbjct: 443 YARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 502
Query: 423 HTKMKKFGDILDDDL 437
++K G + D +
Sbjct: 503 VKELKLSGYVPDTSM 517
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 131/251 (52%), Gaps = 5/251 (1%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
++ A LF + + D++ + SM GY++ E +F ++ +G L P+N TF ++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSL 135
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
L AC+ +L EG+Q+H L K G +N V LINMY++C ++ AR +FD + +
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDR--IVEP 193
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
++ +N MI YA NEA++LF +MQ + N++T + +L++C+ G +D G ++
Sbjct: 194 CVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWI 252
Query: 275 DKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
K K S L+D+ + G L +A I E + K W ++ HG
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGK 311
Query: 335 ADIGKLVAKKI 345
A+ L+ +++
Sbjct: 312 AEKSMLMFERM 322
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 232/454 (51%), Gaps = 48/454 (10%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP----- 77
T +V+ K G + A+ +FD+M ++ V+ ++ GY Q R +AL+LF +
Sbjct: 223 TGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVE 282
Query: 78 ----------------------------------ERDMASWNAMLTGFFQNGELNRAEKL 103
E +++ ++ + + A +
Sbjct: 283 WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRA 342
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F E+ + + ++W+++++GY Q EEA+K F +++ N+ T+ ++ ACS LA
Sbjct: 343 FQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
G Q+H K + SALI MYSKCG L A ++F+ + D+++W I
Sbjct: 403 CNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFES--MDNPDIVAWTAFI 460
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
+ +A++G +EA+ LF KM G + N VT++ +LTACSHAGLV++G D +L+ ++
Sbjct: 461 SGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNV 520
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
DHY C++D+ R+G L EA ++ + + W L+GC H N ++G++ +
Sbjct: 521 APTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGE 580
Query: 344 KILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFV 403
++ +++ E+ Y L N+Y GKW+EAA + M ++ LKK+ CSWI+ + F+
Sbjct: 581 ELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFI 640
Query: 404 VGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDL 437
VGDK H Q++ ++ K+K+F ++ D+
Sbjct: 641 VGDKHHPQTQ-------EIYEKLKEFDGFMEGDM 667
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 100/178 (56%), Gaps = 3/178 (1%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N +L + + L A+KLF E+ + + ++ T+M++ YA+ G+ ++A+ +F+ M A+G
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD- 180
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
KP + + T+L + +L G+QIH + + G NT + + ++NMY KCG L A++
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
+FD +++ ++ G++ Y G +A+ LF + G + + + +L AC+
Sbjct: 241 VFDQMAVKKP--VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 119 MTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG 178
+ ++H EA + +M G+ ++ ++ + AC L SL+ G+ +H + + G
Sbjct: 55 LVSLSKHRKLNEAFEFLQEMD-KAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMG 112
Query: 179 FQENTRVV--SALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAI 236
EN V+ + ++ MY +C L A K+FD+ + + + +S MI+AYA G ++A+
Sbjct: 113 I-ENPSVLLQNCVLQMYCECRSLEDADKLFDE--MSELNAVSRTTMISAYAEQGILDKAV 169
Query: 237 NLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK-----NRSIQVKEDHYA 291
LF+ M G + Y LL + + +D G Q +++ N SI+
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETG----- 224
Query: 292 CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
+V++ + G L A + + + VK ++ G L+ G G A
Sbjct: 225 -IVNMYVKCGWLVGAKRVFDQMAVKKPVACTG-LMVGYTQAGRA 266
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 231/451 (51%), Gaps = 42/451 (9%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
D+S ++++ AKS +A LF + ++V+SW+ +I Y QN EAL +F M
Sbjct: 197 DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMM 256
Query: 77 -----P---------------------------------ERDMASWNAMLTGFFQNGELN 98
P E ++ A++ + +
Sbjct: 257 DDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE 316
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
A +F+ +P+KDV++W ++++G+ +G++ +++ F+ M +P+ V VLG+C
Sbjct: 317 EAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSC 376
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
S L L + + H + K GF N + ++L+ +YS+CG L A K+F+ L+ D +
Sbjct: 377 SELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK--DTVV 434
Query: 219 WNGMIAAYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
W +I Y HG G +A+ FN M + + N+VT++ +L+ACSHAGL+ EG++ F +
Sbjct: 435 WTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Query: 278 LKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADI 337
+ + + +HYA LVDL GR G L A I + + + + G LL C +H N ++
Sbjct: 495 VNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEM 554
Query: 338 GKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGN 397
+ VAKK+ ++E +AG Y L+SN+Y G+W+ +R +K +G+KK S IE+
Sbjct: 555 AETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRR 614
Query: 398 TVQVFVVGDKSHSQSEMLEYLLLGLHTKMKK 428
V FV D+ H + E + LL L MK+
Sbjct: 615 KVHRFVADDELHPEKEPVYGLLKELDLHMKE 645
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 168/339 (49%), Gaps = 44/339 (12%)
Query: 37 DARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------------P------- 77
DAR +F M R++ WN ++ ++ ++ +E L F M P
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 78 ERDMASWNAMLTGFFQN---------------------GELNRAEKLFAELPQKDVITWT 116
E ++ M+ GF + G + A ++F EL + D++TW+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 117 SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK 176
SM++G+ ++G +A++ F +M + P+ T +T++ AC+ L++ G+ +H + +
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 177 TGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAI 236
GF + +V++L+N Y+K A +F ++ ++D+ISW+ +IA Y +G EA+
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK--MIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 237 NLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDL 296
+FN M + G + N T + +L AC+ A +++G + + ++ + ++ + LVD+
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR-KGLETEVKVSTALVDM 308
Query: 297 CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
+ +EA+ + + K +S W L++G ++G A
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVS-WVALISGFTLNGMA 346
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 239/435 (54%), Gaps = 44/435 (10%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------PE 78
+V+ A+ G++ D + + RN+V+WN++I+ YA + +AL LF +M P+
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPD 404
Query: 79 --------------------------------RDMASWNAMLTGFFQNGELNRAEKLFAE 106
D N+++ + ++G ++ A +F +
Sbjct: 405 AFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQ 464
Query: 107 LPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTE 166
+ + V+TW SM+ G++Q+G S EA+ +F M + L+ N TF+ V+ ACS + SL +
Sbjct: 465 IKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY-HSYLEMNEVTFLAVIQACSSIGSLEK 523
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAY 226
G+ +H + +G ++ +ALI+MY+KCG+L+ A +F + R ++SW+ MI AY
Sbjct: 524 GKWVHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFR--AMSSRSIVSWSSMINAY 580
Query: 227 AHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVK 286
HG AI+ FN+M E G + N+V ++ +L+AC H+G V+EG YF+ L+K+ +
Sbjct: 581 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN-LMKSFGVSPN 639
Query: 287 EDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKIL 346
+H+AC +DL R+G LKEA+ I+ + SVWG L+ GC +H DI K + +
Sbjct: 640 SEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLS 699
Query: 347 KVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGD 406
+ ++ G Y+LLSN+YA G+W+E +R MK LKK PG S IE+ V F G+
Sbjct: 700 DIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGE 759
Query: 407 KSHSQSEMLEYLLLG 421
++ Q++ + Y LG
Sbjct: 760 ENRIQTDEI-YRFLG 773
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 178/353 (50%), Gaps = 46/353 (13%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFE-------- 74
T+++ ++G + DA +FD MP+R++V+W+ +++ +N + +AL +F+
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199
Query: 75 -------------------------------RMPERDMASWNAMLTGFFQNGELNRAEKL 103
+M + D N++LT + + G+L +E++
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F ++ +K+ ++WT+M++ Y + SE+AL+ F++M G++PN T +VL +C +
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM-IKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 164 LTEGQQIHQLISKTGFQENTRVVS-ALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
+ EG+ +H + N +S AL+ +Y++CG+L + ++ R++++WN +
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR--VVSDRNIVAWNSL 376
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
I+ YAH G +A+ LF +M + + T ++AC +AGLV G Q ++ R+
Sbjct: 377 ISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI--RT 434
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
E L+D+ ++G + A + + + S+ W +L G + +GN+
Sbjct: 435 DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSMLCGFSQNGNS 486
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 178/416 (42%), Gaps = 71/416 (17%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
+++ Y Q L +A ++F+ MP RD+ +W+ +++ +NGE+ +A ++F
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMF--------- 190
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
K + G++P+ T ++V+ C+ L L + +H
Sbjct: 191 -----------------------KCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQ 227
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
I++ F + + ++L+ MYSKCG+L + +IF+ + +++ +SW MI++Y +
Sbjct: 228 ITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEK--IAKKNAVSWTAMISSYNRGEFSE 285
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
+A+ F++M + G + N VT +L++C GL+ EG ++ E L
Sbjct: 286 KALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL 345
Query: 294 VDLCGRAGRLKE--------------------AFY-----IIEGLG---------VKLSL 319
V+L G+L + + Y +I+ LG +K
Sbjct: 346 VELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 320 SVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKM 379
++ C G +GK + +++ + + + L +MY+ G A+ V ++
Sbjct: 406 FTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQI 465
Query: 380 KDKGLKKQPG--CSWIEVGNTVQVFVVGD-KSHSQSEMLEYLLLGLHTKMKKFGDI 432
K + + C + + GN+V+ + D HS EM E L + G +
Sbjct: 466 KHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 118/253 (46%), Gaps = 6/253 (2%)
Query: 79 RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM 138
RD ++ + G + + +F P D + ++ L + A+ ++ ++
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 139 QANGGLKPNNGTFVTVLGACSG-LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCG 197
+ + + F +VL AC+G L+ G ++H I K G ++ + ++L+ MY + G
Sbjct: 92 VSET-TQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 198 ELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
L A K+FD + RDL++W+ ++++ +G +A+ +F M + G + + VT + +
Sbjct: 151 NLSDAEKVFDG--MPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 258 LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKL 317
+ C+ G + ++ + + + E L+ + + G L + I E + K
Sbjct: 209 VEGCAELGCLRIARSVHGQITR-KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 318 SLSVWGPLLAGCN 330
++S W +++ N
Sbjct: 268 AVS-WTAMISSYN 279
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 229/459 (49%), Gaps = 72/459 (15%)
Query: 5 RGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNR 64
R + Q++E D S + ++ G A GR++++R LFDR R V+ WN+MI+GY N
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 65 RLDEALELFERMPER--------------------------------------DMASWNA 86
EAL LF M D+ +
Sbjct: 299 MKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST 358
Query: 87 MLTGFFQNGELNRAEKLFAE-------------------------------LPQKDVITW 115
+L + + G A KLF+E + K +I+W
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 418
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
SM G++Q+G + E L+ F +M L + + +V+ AC+ ++SL G+Q+ +
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMH-KLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEA 235
G + V S+LI++Y KCG + R++FD + + D + WN MI+ YA +G G EA
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDT--MVKSDEVPWNSMISGYATNGQGFEA 535
Query: 236 INLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVD 295
I+LF KM G + +T++ +LTAC++ GLV+EG + F+ + + ++H++C+VD
Sbjct: 536 IDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVD 595
Query: 296 LCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGT 355
L RAG ++EA ++E + + S+W +L GC +G +GK A+KI+++E EN+
Sbjct: 596 LLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVA 655
Query: 356 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIE 394
Y LS ++A+ G W+ +A VR M++ + K PG SW +
Sbjct: 656 YVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 134/212 (63%), Gaps = 6/212 (2%)
Query: 30 AKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLT 89
++SG++ AR LFD MP RN SWN MI GY + +L F+ MPERD SWN +++
Sbjct: 73 SRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVS 132
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
GF + GEL+ A +LF +P+KDV+T S++ GY +G +EEAL++F ++ +
Sbjct: 133 GFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN----FSADAI 188
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
T TVL AC+ L +L G+QIH I G + ++++ S+L+N+Y+KCG+L +A + +
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ- 247
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+R+ D S + +I+ YA+ G NE+ LF++
Sbjct: 248 -IREPDDHSLSALISGYANCGRVNESRGLFDR 278
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 139/269 (51%), Gaps = 21/269 (7%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M +R+ SW TM++G SG + FD MP R+ SWN +++G+A+ L A
Sbjct: 85 FDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVAR 144
Query: 71 ELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP-QKDVITWTSMMTGYAQHGLSE 129
LF MPE+D+ + N++L G+ NG A +LF EL D IT T+++ A+
Sbjct: 145 RLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAEL---- 200
Query: 130 EALKMFTKMQAN---GGLKPN---NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
EALK ++ A GG++ + N + V V C L ++ + + + +
Sbjct: 201 EALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL-------RMASYMLEQIREPDD 253
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
+SALI+ Y+ CG ++ +R +FD R +I WN MI+ Y + EA+ LFN+M+
Sbjct: 254 HSLSALISGYANCGRVNESRGLFDRK--SNRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQ 272
+ + T ++ AC G ++ G Q
Sbjct: 312 N-ETREDSRTLAAVINACIGLGFLETGKQ 339
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVS-ALINMYSKCGELHIARKIFDDG 209
+V +L +CS T +Q + L+ K GF + +V+ L+ MYS+ G++ IAR +FD+
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDE- 87
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL-GFQANDVTYVELLTACSHAGLVD 268
+ R+ SWN MI Y + G ++ F+ M E G+ N V ++ + AG +
Sbjct: 88 -MPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVV-----VSGFAKAGELS 141
Query: 269 EGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ F+ + + + + + +++ G +EA + + L +L
Sbjct: 142 VARRLFNAMPEKDVVTLNSLLHGYILN-----GYAEEALRLFKELNFSADAITLTTVLKA 196
Query: 329 CNVHGNADIGKLVAKKIL--KVEHENAGTYSLLSNMYASVGKWKEAA 373
C GK + +IL VE ++ SL+ N+YA G + A+
Sbjct: 197 CAELEALKCGKQIHAQILIGGVECDSKMNSSLV-NVYAKCGDLRMAS 242
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 203/347 (58%), Gaps = 2/347 (0%)
Query: 49 NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELP 108
+V A++ Y + +A ++F+ MPER+ +WN M+TG G+ +A ++P
Sbjct: 157 HVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMP 216
Query: 109 QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
+ V++WT+++ GYA+ +EA+ +F++M A +KPN T + +L A L L
Sbjct: 217 NRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCG 276
Query: 169 QIHQLISKTGFQE-NTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
+H + K GF + RV ++LI+ Y+KCG + A K F + +++L+SW MI+A+A
Sbjct: 277 SVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFA 336
Query: 228 HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG-IQYFDKLLKNRSIQVK 286
HG G EA+++F M+ LG + N VT + +L ACSH GL +E +++F+ ++ I
Sbjct: 337 IHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPD 396
Query: 287 EDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKIL 346
HY CLVD+ R GRL+EA I + ++ VW LL C+V+ +A++ + V +K++
Sbjct: 397 VKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLM 456
Query: 347 KVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWI 393
++E + G Y L+SN++ G++ +A R +M +G+ K PG S +
Sbjct: 457 ELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 47/281 (16%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F++M ER+ +W M+ GL G + A ++MP R VVSW +I GYA+ + EA
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEA 239
Query: 70 LELFERMPERDM-------------ASW----------------------------NAML 88
+ LF RM D A W N+++
Sbjct: 240 ILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLI 299
Query: 89 TGFFQNGELNRAEKLFAELP--QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
+ + G + A K F E+P +K++++WT+M++ +A HG+ +EA+ MF M+ GLKP
Sbjct: 300 DAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDME-RLGLKP 358
Query: 147 NNGTFVTVLGACS--GLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
N T ++VL ACS GLA + + ++++ + + L++M + G L A K
Sbjct: 359 NRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEK 418
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
I + + ++ ++ W ++ A + + A + K+ EL
Sbjct: 419 IALEIPIEEKAVV-WRMLLGACSVYDDAELAERVTRKLMEL 458
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 239/450 (53%), Gaps = 31/450 (6%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKS-GRIDDARALFDRMPLRN-----------VVSWNAMI 57
F+ ++ W T++ A R ++A L+ +M R V+ A I
Sbjct: 105 VFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYI 164
Query: 58 TGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTS 117
G+++ +++ ++ + D+ N ++ + G L+ A K+F E+P++ +++W S
Sbjct: 165 FGFSEGKQVH--CQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNS 222
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK- 176
M+ + G + AL++F +MQ + +P+ T +VL AC+GL SL+ G H + +
Sbjct: 223 MIDALVRFGEYDSALQLFREMQRS--FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRK 280
Query: 177 --TGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNE 234
+ V ++LI MY KCG L +A ++F +++RDL SWN MI +A HG E
Sbjct: 281 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG--MQKRDLASWNAMILGFATHGRAEE 338
Query: 235 AINLFNKM--QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC 292
A+N F++M + + N VT+V LL AC+H G V++G QYFD ++++ I+ +HY C
Sbjct: 339 AMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGC 398
Query: 293 LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG-NADIGKLVAKKILKVEHE 351
+VDL RAG + EA ++ + +K +W LL C G + ++ + +A+ I+ + +
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKED 458
Query: 352 N-------AGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVV 404
N +G Y LLS +YAS +W + VR M + G++K+PGCS IE+ F
Sbjct: 459 NESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFA 518
Query: 405 GDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
GD SH Q++ + L + +++ G + D
Sbjct: 519 GDTSHPQTKQIYQQLKVIDDRLRSIGYLPD 548
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 201/347 (57%), Gaps = 4/347 (1%)
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
++ S ++M+ G+ G++ A++LF L +K+++ WT+M GY + L++
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI 384
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
AN P++ V+VLGACS A + G++IH +TG + ++V+A ++MYSKCG +
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
A +IFD +RD + +N MIA AHHG+ ++ F M E GF+ +++T++ LL+
Sbjct: 445 EYAERIFDSSF--ERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLS 502
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLG-VKLS 318
AC H GLV EG +YF +++ +I + HY C++DL G+A RL +A ++EG+ V+
Sbjct: 503 ACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKD 562
Query: 319 LSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMK 378
+ G L C+ + N ++ K V +K+L +E N Y ++N YAS G+W E +R +
Sbjct: 563 AVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQ 622
Query: 379 MKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTK 425
M+ K L+ GCSW + +F D SH ++E + Y +L TK
Sbjct: 623 MRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAI-YAMLHFVTK 668
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 166/334 (49%), Gaps = 47/334 (14%)
Query: 51 VSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLF-AELPQ 109
VS N ++ Y+++ L EA +F+ M ER++ SWNA++ + + + A +LF ++ +
Sbjct: 24 VSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCE 83
Query: 110 KDVITWTSMMTGYAQ-HGLSEEALKMFTKM--QANGGLKPNNGTFVTVLGACSGLASLTE 166
+D+IT+ ++++G+A+ G EA++MF +M + + ++ T T++ + L ++
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD-------DGLLRQ------ 213
G+Q+H ++ KTG VS+LI+MYSKCG+ IF+ D + R
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 214 -------------------RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTY 254
D ISWN +IA YA +GY EA+ + M+E G + ++ ++
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 255 VELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLK--EAFYIIEG 312
+L S + G + ++LKN S K + +VD+ + G +K E+ +++ G
Sbjct: 264 GAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVS-SGIVDVYCKCGNMKYAESAHLLYG 322
Query: 313 LGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKIL 346
G S A + G + GK+V K L
Sbjct: 323 FGNLYS--------ASSMIVGYSSQGKMVEAKRL 348
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 35/188 (18%)
Query: 189 LINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
L+N+YSK G L AR +FD+ L +R++ SWN +IAAY EA LF + +
Sbjct: 29 LVNLYSKSGLLREARNVFDEML--ERNVYSWNAVIAAYVKFNNVKEARELF---ESDNCE 83
Query: 249 ANDVTYVELLTACSHA-GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAF 307
+ +TY LL+ + G E I+ F ++ + + D + + + + +L F
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFT-VTTMVKLSAKLTNVF 142
Query: 308 YIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVG 367
Y G L G V D K ++ +MY+ G
Sbjct: 143 Y--------------GEQLHGVLVKTGNDGTKFAVSSLI--------------HMYSKCG 174
Query: 368 KWKEAANV 375
K+KE N+
Sbjct: 175 KFKEVCNI 182
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 230/410 (56%), Gaps = 24/410 (5%)
Query: 2 WEDRGCTM-AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGY 60
+ED G F ++E+D+ +W TM+ ++ A +++ RM + V + G
Sbjct: 336 FEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKP-DEFTFGS 394
Query: 61 AQNRRLD-EALELFERMP-----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVIT 114
LD + LE+ + + NA+++ + +NG++ +A+ LF +K++I+
Sbjct: 395 LLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLIS 454
Query: 115 WTSMMTGYAQHGLSEEALKMFT-KMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
W ++++G+ +G E L+ F+ +++ + P+ T T+L C +SL G Q H
Sbjct: 455 WNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAY 514
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
+ + G + T + +ALINMYS+CG + + ++F+ + ++D++SWN +I+AY+ HG G
Sbjct: 515 VLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ--MSEKDVVSWNSLISAYSRHGEGE 572
Query: 234 EAINLFNKMQELGFQANDV-TYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC 292
A+N + MQ+ G D T+ +L+ACSHAGLV+EG++ F+ +++ + DH++C
Sbjct: 573 NAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSC 632
Query: 293 LVDLCGRAGRLKEAFYIIEGLGVKLS-------LSVWGPLLAGCNVHGNADIGKLVAKKI 345
LVDL GRAG L EA E L VK+S + VW L + C HG+ +GK+VAK +
Sbjct: 633 LVDLLGRAGHLDEA----ESL-VKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLL 687
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
++ E ++ Y LSN+YA G WKEA R + G KQ GCSW+ +
Sbjct: 688 MEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 148/289 (51%), Gaps = 48/289 (16%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVS-WNAMITGYAQNRRLDEA 69
F+++ E DV SWTT++ K G I+ A +FD+MP R+ V+ WNAMITG ++ + +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 70 LELFERMPER-------------DMASW-------------------------NAMLTGF 91
+ELF M + M + NA++T +
Sbjct: 175 VELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMY 234
Query: 92 FQNGELNRAEKLFAE--LPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
F + A +F E + +D +T+ ++ G A +E+L +F KM L+P +
Sbjct: 235 FNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFK-RDESLLVFRKM-LEASLRPTDL 292
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
TFV+V+G+CS A G Q+H L KTG+++ T V +A + MYS + A K+F+
Sbjct: 293 TFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES- 348
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL 258
L ++DL++WN MI++Y G A++++ +M +G + ++ T+ LL
Sbjct: 349 -LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL 396
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 122/215 (56%), Gaps = 6/215 (2%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKD-V 112
N +++ Y + L + F+ + E D+ SW +L+ F+ G++ A ++F ++P++D V
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
W +M+TG + G E ++++F +M G++ + F T+L C SL G+Q+H
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMH-KLGVRHDKFGFATILSMCD-YGSLDFGKQVHS 213
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
L+ K GF + VV+ALI MY C + A +F++ + RD +++N +I A G+
Sbjct: 214 LVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFK 271
Query: 233 -NEAINLFNKMQELGFQANDVTYVELLTACSHAGL 266
+E++ +F KM E + D+T+V ++ +CS A +
Sbjct: 272 RDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM 306
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 157/343 (45%), Gaps = 51/343 (14%)
Query: 35 IDDARALFDR--MPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASW-------- 84
+ DA +F+ + +R+ V++N +I G A +R DE+L +F +M E +
Sbjct: 240 VVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVM 298
Query: 85 ----------------------------NAMLTGFFQNGELNRAEKLFAELPQKDVITWT 116
NA +T + + A K+F L +KD++TW
Sbjct: 299 GSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWN 358
Query: 117 SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK 176
+M++ Y Q L + A+ ++ +M G+KP+ TF ++L L L + + I K
Sbjct: 359 TMISSYNQAKLGKSAMSVYKRMHII-GVKPDEFTFGSLLATSLDLDVL---EMVQACIIK 414
Query: 177 TGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAI 236
G + +ALI+ YSK G++ A +F+ L +++LISWN +I+ + H+G+ E +
Sbjct: 415 FGLSSKIEISNALISAYSKNGQIEKADLLFERSL--RKNLISWNAIISGFYHNGFPFEGL 472
Query: 237 NLFNKM--QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA-CL 293
F+ + E+ + T LL+ C + G Q +L++ Q KE L
Sbjct: 473 ERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG--QFKETLIGNAL 530
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+++ + G ++ + + + K +S W L++ + HG +
Sbjct: 531 INMYSQCGTIQNSLEVFNQMSEKDVVS-WNSLISAYSRHGEGE 572
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 119 MTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG 178
+TG + G + ALK+F + L+P+ + + L G Q+H ++G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
++ V + L+++Y + G L +K FD+ + + D+ SW +++A G A +
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDE--IDEPDVYSWTTLLSASFKLGDIEYAFEV 145
Query: 239 FNKMQELGFQANDVT-YVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH--YACLVD 295
F+KM E +DV + ++T C +G + ++ F ++ K + V+ D +A ++
Sbjct: 146 FDKMPE----RDDVAIWNAMITGCKESGYHETSVELFREMHK---LGVRHDKFGFATILS 198
Query: 296 LC 297
+C
Sbjct: 199 MC 200
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 232/422 (54%), Gaps = 13/422 (3%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAM-----ITGYAQNRRLDEALEL 72
D+S +++ + G + G + + + + V WN + + ++ R L+ AL++
Sbjct: 201 DLSVFSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRLFSNLRDLNLALQV 259
Query: 73 FERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLS 128
RM ++ + A++ + + G++ A+++F + +++ T++M Y Q
Sbjct: 260 HSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSF 319
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
EEAL +F+KM + PN TF +L + + L+ L +G +H L+ K+G++ + V +A
Sbjct: 320 EEALNLFSKMDTKE-VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378
Query: 189 LINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
L+NMY+K G + ARK F + RD+++WN MI+ +HHG G EA+ F++M G
Sbjct: 379 LVNMYAKSGSIEDARKAFSG--MTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 249 ANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFY 308
N +T++ +L ACSH G V++G+ YF++L+K +Q HY C+V L +AG K+A
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAED 496
Query: 309 IIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGK 368
+ ++ + W LL C V N +GK VA+ ++ ++G Y LLSN++A +
Sbjct: 497 FMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSRE 556
Query: 369 WKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKK 428
W+ A VR M ++G+KK+PG SWI + N VF+ D H + ++ + + +K+K
Sbjct: 557 WEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKP 616
Query: 429 FG 430
G
Sbjct: 617 LG 618
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 32/341 (9%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR-----NVVSWNAMITGYAQNRR 65
F+ M ER+V SW M+ G SG + LF M N + + + R
Sbjct: 92 FDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGR 151
Query: 66 LDEALELF----------ERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITW 115
++E + + ++ +G NGE A ++ +LP D+ +
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSG---NGE---AIRVLDDLPYCDLSVF 205
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
+S ++GY + G +E L + K AN NN T+++ L S L L Q+H +
Sbjct: 206 SSALSGYLECGAFKEGLDVLRK-TANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMV 264
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEA 235
+ GF ALINMY KCG++ A+++FDD +++ ++ AY EA
Sbjct: 265 RFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT--HAQNIFLNTTIMDAYFQDKSFEEA 322
Query: 236 INLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN---RSIQVKEDHYAC 292
+NLF+KM N+ T+ LL + + L+ +G +LK+ + V
Sbjct: 323 LNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN----A 378
Query: 293 LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
LV++ ++G +++A G+ + + W +++GC+ HG
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 3/224 (1%)
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
D N+++ + + E RA KLF +P+++V++W +MM GY G E LK+F M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
+G +PN V +CS + EG+Q H K G + V + L+ MYS C
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN 187
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
A ++ DD L DL ++ ++ Y G E +++ K F N++TY+ L
Sbjct: 188 GEAIRVLDD--LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLR 245
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRL 303
S+ ++ +Q ++++ + + L+++ G+ G++
Sbjct: 246 LFSNLRDLNLALQVHSRMVR-FGFNAEVEACGALINMYGKCGKV 288
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 19/294 (6%)
Query: 154 VLGACSGLASLTEGQQIHQ---LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
+L C+ + L G+ IH + +++ E+ +++LIN+Y KC E ARK+FD L
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD--L 94
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQANDVTYVELLTACSHAGLVDE 269
+ +R+++SW M+ Y + G+ E + LF M G + N+ + +CS++G ++E
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 270 GIQYFDKLLKNRSI--QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLA 327
G Q+ LK I + + + LC G EA +++ L LSV+ L+
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNG---EAIRVLDDLPY-CDLSVFSSALS 210
Query: 328 GCNVHGNADIGKLVAKKILKVEHE-NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
G G G V +K + N TY +++++ A V +M G
Sbjct: 211 GYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 387 Q-PGCSWI-----EVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
+ C + + G + V D +H+Q+ L ++ + + K F + L+
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALN 324
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 219/409 (53%), Gaps = 42/409 (10%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP----- 77
T++V K G I +AR +F+ + R++V WNA+++ Y N +DEA L + M
Sbjct: 181 TSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNR 240
Query: 78 --------------------------------ERDMASWNAMLTGFFQNGELNRAEKLFA 105
+ D+ A+L + ++ L+ A + F
Sbjct: 241 FRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFE 300
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ ++V++W +M+ G+AQ+G EA+++F +M L+P+ TF +VL +C+ +++
Sbjct: 301 SMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN-LQPDELTFASVLSSCAKFSAIW 359
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
E +Q+ +++K G + V ++LI+ YS+ G L A F +R+ DL+SW +I A
Sbjct: 360 EIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHS--IREPDLVSWTSVIGA 417
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
A HG+ E++ +F M + Q + +T++E+L+ACSH GLV EG++ F ++ + I+
Sbjct: 418 LASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEA 476
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
+++HY CL+DL GRAG + EA ++ + + S GCN+H + K AKK+
Sbjct: 477 EDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKL 536
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL-KKQPGCSWI 393
L++E YS+LSN Y S G W +AA +R + + K PGCSW+
Sbjct: 537 LEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 166/354 (46%), Gaps = 40/354 (11%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQH----------GLSEEALKM 134
N +L + + E + A+KLF E+P ++++TW ++ G Q G + +
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 135 FTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYS 194
FT + + + +F+ ++ C+ ++ G Q+H L+ K G + + ++L++ Y
Sbjct: 135 FTDVSLD------HVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYG 188
Query: 195 KCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM--QELGFQANDV 252
KCG + AR++F+ L RDL+ WN ++++Y +G +EA L M + F+ +
Sbjct: 189 KCGLIVEARRVFEAVL--DRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYF 246
Query: 253 TYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEG 312
T+ LL+AC +++G Q L K S Q L+++ ++ L +A E
Sbjct: 247 TFSSLLSACR----IEQGKQIHAILFK-VSYQFDIPVATALLNMYAKSNHLSDARECFES 301
Query: 313 LGVKLSLSVWGPLLAGCNVHGNA-DIGKLVAKKILKVEHENAGTY-SLLSNMYASVGKWK 370
+ V+ +S W ++ G +G + +L + +L+ + T+ S+LS+ W
Sbjct: 302 MVVRNVVS-WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW- 359
Query: 371 EAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHT 424
E V+ + KG ++ V N++ S+S++ L LL H+
Sbjct: 360 EIKQVQAMVTKKG-----SADFLSVANSLI------SSYSRNGNLSEALLCFHS 402
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 224/423 (52%), Gaps = 46/423 (10%)
Query: 13 QMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALEL 72
+MQE + S T +VD K A +FD+M ++N VSW AMI+G N+ + ++L
Sbjct: 180 RMQESVLLS-TALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDL 238
Query: 73 FERM------PER----------------------------------DMASWNAMLTGFF 92
F M P R D A +T +
Sbjct: 239 FRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC 298
Query: 93 QNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFV 152
+ G ++ + LF +DV+ W+SM++GYA+ G E + + +M+ G ++ N+ T +
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEG-IEANSVTLL 357
Query: 153 TVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR 212
++ AC+ L+ +H I K GF + + +ALI+MY+KCG L AR++F + L
Sbjct: 358 AIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE--LT 415
Query: 213 QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ 272
++DL+SW+ MI AY HG+G+EA+ +F M + G + +D+ ++ +L+AC+HAGLV+E
Sbjct: 416 EKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQT 475
Query: 273 YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVH 332
F + K + V +HYAC ++L GR G++ +AF + + +K S +W LL+ C H
Sbjct: 476 IFTQAGKYH-MPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETH 534
Query: 333 GNADI-GKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 391
G D+ GK++A +++K E +N Y LLS ++ G + A VR M+ + L K G S
Sbjct: 535 GRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFS 594
Query: 392 WIE 394
IE
Sbjct: 595 KIE 597
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 176/358 (49%), Gaps = 28/358 (7%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGY---------- 60
F++M RD S+ ++++ + G + +A L M + + ++
Sbjct: 105 FDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSS 164
Query: 61 AQNRRLDEALELF-ERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
++ R+ AL L ERM E + S A++ + + + A +F ++ K+ ++WT+M+
Sbjct: 165 SKVARMFHALVLVDERMQESVLLS-TALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMI 223
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGL---ASLTEGQQIHQLISK 176
+G + E + +F MQ L+PN T ++VL AC L +SL ++IH +
Sbjct: 224 SGCVANQNYEMGVDLFRAMQRE-NLRPNRVTLLSVLPACVELNYGSSLV--KEIHGFSFR 280
Query: 177 TGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAI 236
G + R+ +A + MY +CG + ++R +F+ + RD++ W+ MI+ YA G +E +
Sbjct: 281 HGCHADERLTAAFMTMYCRCGNVSLSRVLFETS--KVRDVVMWSSMISGYAETGDCSEVM 338
Query: 237 NLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA---CL 293
NL N+M++ G +AN VT + +++AC+++ L+ ++LK + H L
Sbjct: 339 NLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFM----SHILLGNAL 394
Query: 294 VDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE 351
+D+ + G L A + L K L W ++ +HG+ + K ++K HE
Sbjct: 395 IDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHE 451
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 119 MTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS-GLASLTEGQQIHQLISKT 177
+ G +EAL+++ + G +V+ AC+ G Q+H L K
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
G +T V ++LI+MY+K + RK+FD+ L RD +S+ +I + G EA+
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEML--HRDTVSYCSIINSCCQDGLLYEAMK 134
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL-LKNRSIQVKEDHYACLVDL 296
L +M GF LL C+ G + + F L L + +Q LVD+
Sbjct: 135 LIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDM 194
Query: 297 CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
+ AF++ + + VK +S W +++GC + N ++G
Sbjct: 195 YLKFDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMG 235
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
D N++++ + + K+F E+ +D +++ S++ Q GL EA+K+ +M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTE-GQQIHQLI-SKTGFQENTRVVSALINMYSKCG 197
G + P + ++L C+ + S ++ + H L+ QE+ + +AL++MY K
Sbjct: 141 FYGFI-PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 198 ELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
+ A +FD + ++ +SW MI+ + ++LF MQ + N VT + +
Sbjct: 200 DHAAAFHVFDQ--MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSV 257
Query: 258 LTAC 261
L AC
Sbjct: 258 LPAC 261
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 199/372 (53%), Gaps = 38/372 (10%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPE-RDMA 82
++D K + AR LFD +P RN V WNAMI+ Y ++ EA+EL+E M + +
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 83 SWNAMLTGFF--QNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQA 140
S+NA++ G ++G S A++ + KM
Sbjct: 148 SFNAIIKGLVGTEDG--------------------------------SYRAIEFYRKM-I 174
Query: 141 NGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELH 200
KPN T + ++ ACS + + ++IH + + + ++ S L+ Y +CG +
Sbjct: 175 EFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIV 234
Query: 201 IARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA 260
+ +FD + RD+++W+ +I+AYA HG A+ F +M+ +D+ ++ +L A
Sbjct: 235 YVQLVFDS--MEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKA 292
Query: 261 CSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLS 320
CSHAGL DE + YF ++ + ++ +DHY+CLVD+ R GR +EA+ +I+ + K +
Sbjct: 293 CSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAK 352
Query: 321 VWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
WG LL C +G ++ ++ A+++L VE EN Y LL +Y SVG+ +EA +R+KMK
Sbjct: 353 TWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMK 412
Query: 381 DKGLKKQPGCSW 392
+ G+K PG SW
Sbjct: 413 ESGVKVSPGSSW 424
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 43/261 (16%)
Query: 112 VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIH 171
+I+ T ++ YA G E+AL +F +M ++ L + F L +C+ G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 172 QLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGY 231
K+ F N V AL++MY KC + ARK+FD+ + QR+ + WN MI+ Y H G
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDE--IPQRNAVVWNAMISHYTHCGK 129
Query: 232 GNEAINL---------------------------------FNKMQELGFQANDVTYVELL 258
EA+ L + KM E F+ N +T + L+
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 259 TACSHAG---LVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGV 315
+ACS G L+ E Y + L Q+K LV+ GR G + + + +
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSG----LVEAYGRCGSIVYVQLVFDSMED 245
Query: 316 KLSLSVWGPLLAGCNVHGNAD 336
+ + W L++ +HG+A+
Sbjct: 246 R-DVVAWSSLISAYALHGDAE 265
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 8 TMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLD 67
+ AF + E + +V+ + G I + +FD M R+VV+W+++I+ YA + +
Sbjct: 206 SYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAE 265
Query: 68 EALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGL 127
AL+ F+ M EL + D I + +++ + GL
Sbjct: 266 SALKTFQEM-------------------ELAKV--------TPDDIAFLNVLKACSHAGL 298
Query: 128 SEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVS 187
++EAL F +MQ + GL+ + + ++ S + E ++ Q + + + +
Sbjct: 299 ADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPE---KPTAKTWG 355
Query: 188 ALINMYSKCGELHIA 202
AL+ GE+ +A
Sbjct: 356 ALLGACRNYGEIELA 370
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 216/429 (50%), Gaps = 78/429 (18%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDM- 81
+ ++D AK ++ ARAL + M + +VVSWN+MI G + + EAL +F RM ERDM
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 82 -----------------------------------ASW----NAMLTGFFQNGELNRAEK 102
A++ NA++ + + G ++ A K
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
+F + +KDVI+WT+++TG +G +EALK+F M+ GG+ P+ +VL A + L
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRV-GGITPDKIVTASVLSASAELT 444
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
L GQQ+H K+GF + V ++L+ MY+KCG L A IF+ + RDLI+W +
Sbjct: 445 LLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNS--MEIRDLITWTCL 502
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
I YA +G L+++ +YFD +
Sbjct: 503 IVGYAKNG-----------------------------------LLEDAQRYFDSMRTVYG 527
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVA 342
I +HYAC++DL GR+G + ++ + V+ +VW +LA HGN + G+ A
Sbjct: 528 ITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAA 587
Query: 343 KKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVF 402
K ++++E NA Y LSNMY++ G+ EAANVR MK + + K+PGCSW+E V F
Sbjct: 588 KTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSF 647
Query: 403 VVGDKSHSQ 411
+ D+ H +
Sbjct: 648 MSEDRRHPR 656
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 182/378 (48%), Gaps = 68/378 (17%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F++M ERD +W TM+ + S R+ DA LF P++N +SWNA+I+GY ++ EA
Sbjct: 51 FDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAF 110
Query: 71 ELFERMP---------------------------------------ERDMASWNAMLTGF 91
LF M + D+ N +L +
Sbjct: 111 NLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMY 170
Query: 92 FQNGELNRAEKLFAELP-QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
Q ++ AE LF + +K+ +TWTSM+TGY+Q+G + +A++ F ++ G + N T
Sbjct: 171 AQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN-QSNQYT 229
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
F +VL AC+ +++ G Q+H I K+GF+ N V SALI+MY+KC E+ AR + +
Sbjct: 230 FPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEG-- 287
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL------------ 258
+ D++SWN MI G EA+++F +M E + +D T +L
Sbjct: 288 MEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKI 347
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLS 318
+ +H +V G + KL+ N LVD+ + G + A + EG+ K
Sbjct: 348 ASSAHCLIVKTGYATY-KLVNN-----------ALVDMYAKRGIMDSALKVFEGMIEKDV 395
Query: 319 LSVWGPLLAGCNVHGNAD 336
+S W L+ G +G+ D
Sbjct: 396 IS-WTALVTGNTHNGSYD 412
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 163/288 (56%), Gaps = 8/288 (2%)
Query: 48 RNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAEL 107
R + N ++ +++ R+DEA ++F++MPERD +WN M+ + + L+ AEKLF
Sbjct: 26 RTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSN 85
Query: 108 PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEG 167
P K+ I+W ++++GY + G EA +F +MQ++ G+KPN T +VL C+ L L G
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD-GIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 168 QQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
+QIH KTGF + VV+ L+ MY++C + A +F+ + +++ ++W M+ Y+
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFET-MEGEKNNVTWTSMLTGYS 203
Query: 228 HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKE 287
+G+ +AI F ++ G Q+N T+ +LTAC+ G+Q ++K+ K
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS---GFKT 260
Query: 288 DHY--ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ Y + L+D+ + ++ A ++EG+ V +S W ++ GC G
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVS-WNSMIVGCVRQG 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 54/287 (18%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALF----------DRMPLRNVVSWNAMIT- 58
F M E+DV SWT +V G +G D+A LF D++ +V+S +A +T
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 59 -GYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTS 117
+ Q + F ++ N+++T + + G L A +F + +D+ITWT
Sbjct: 446 LEFGQQVHGNYIKSGF----PSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTC 501
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT 177
++ GYA++GL E+A + F M+ G+ P + AC
Sbjct: 502 LIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHY-----AC------------------- 537
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
+I+++ + G+ ++ + + D W ++AA HG
Sbjct: 538 -----------MIDLFGRSGDFVKVEQLLHQ-MEVEPDATVWKAILAASRKHGNIENGER 585
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQ 284
+ EL N V YV+L S AG DE +L+K+R+I
Sbjct: 586 AAKTLMELE-PNNAVPYVQLSNMYSAAGRQDEAAN-VRRLMKSRNIS 630
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 35/202 (17%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVS-------WNAMITGYAQN 63
FN M+ RD+ +WT ++ G AK+G ++DA+ FD M R V + MI + ++
Sbjct: 488 FNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM--RTVYGITPGPEHYACMIDLFGRS 545
Query: 64 RRLDEALELFERMP-ERDMASWNAMLT-----GFFQNGELNRAEKLFAELPQKDVITWTS 117
+ +L +M E D W A+L G +NGE RA K EL + + +
Sbjct: 546 GDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGE--RAAKTLMELEPNNAVPYVQ 603
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT 177
+ Y+ G +EA + M++ K G + + E ++H +S+
Sbjct: 604 LSNMYSAAGRQDEAANVRRLMKSRNISKE------------PGCSWVEEKGKVHSFMSE- 650
Query: 178 GFQENTRVVSALINMYSKCGEL 199
R ++ +YSK E+
Sbjct: 651 -----DRRHPRMVEIYSKVDEM 667
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 226/412 (54%), Gaps = 15/412 (3%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM-----PLRNVVSWNAMITGYAQNRR 65
F ++ ++ SW +++ G +++G + A ++ R+ P + +++A I+ A+ R
Sbjct: 358 FGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPER 417
Query: 66 LDEALELFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
L ++ ER + +L+ +F+N E A+K+F + ++DV+ WT M+ G
Sbjct: 418 FVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVG 477
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
+++ G SE A++ F +M + + + +V+GACS +A L +G+ H L +TGF
Sbjct: 478 HSRLGNSELAVQFFIEMYREKN-RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDC 536
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
V AL++MY K G+ A IF L DL WN M+ AY+ HG +A++ F +
Sbjct: 537 VMSVCGALVDMYGKNGKYETAETIF--SLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQ 594
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAG 301
+ E GF + VTY+ LL ACSH G +G ++ +K + I+ HY+C+V+L +AG
Sbjct: 595 ILENGFMPDAVTYLSLLAACSHRGSTLQG-KFLWNQMKEQGIKAGFKHYSCMVNLVSKAG 653
Query: 302 RLKEAFYIIE-GLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLS 360
+ EA +IE +W LL+ C N IG A++ILK++ E+ T+ LLS
Sbjct: 654 LVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLS 713
Query: 361 NMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV-GNTVQVFVVGDKSHSQ 411
N+YA G+W++ A +R K++ K PG SWIEV N QVF GD+S+ +
Sbjct: 714 NLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 179/391 (45%), Gaps = 56/391 (14%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSW---NAMITGYAQNRRLDE------ALELFER 75
++ + ++ AR +FD+MP RN+V+ +A+ + L + ++
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFF 87
Query: 76 MPERDMASW---------------------------------------NAMLTGFFQNGE 96
MP ++AS N +++ + + G
Sbjct: 88 MPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGS 147
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHG-LSEEALKMFTKMQANGGLKPNNGTFVTVL 155
L +A K+F ++P ++V+++ ++ + Y+++ + A + T M A +KPN+ TF +++
Sbjct: 148 LEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHM-AFEYVKPNSSTFTSLV 206
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
C+ L + G ++ I K G+ +N V ++++ MYS CG+L AR+IFD + RD
Sbjct: 207 QVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD--CVNNRD 264
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFD 275
++WN MI + + + F M G TY +L CS G G
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA 324
Query: 276 KLLKNRSI-QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
+++ + S+ + D+ L+D+ G ++EAFY+ G +L W +++GC+ +G
Sbjct: 325 RIIVSDSLADLPLDN--ALLDMYCSCGDMREAFYVF-GRIHNPNLVSWNSIISGCSENGF 381
Query: 335 ADIGKLVAKKILKVEHENAGTYSLLSNMYAS 365
+ L+ +++L++ Y+ + + A+
Sbjct: 382 GEQAMLMYRRLLRMSTPRPDEYTFSAAISAT 412
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 183/408 (44%), Gaps = 44/408 (10%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
+V T+++ + G ++ AR +FD + R+ V+WN MI G +N ++++ L F M
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 77 -----PER---------------------------------DMASWNAMLTGFFQNGELN 98
P + D+ NA+L + G++
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMR 352
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
A +F + ++++W S+++G +++G E+A+ M+ ++ +P+ TF + A
Sbjct: 353 EAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISAT 412
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ G+ +H ++K G++ + V + L++MY K E A+K+FD ++++RD++
Sbjct: 413 AEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFD--VMKERDVVL 470
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
W MI ++ G A+ F +M +++ + ++ ACS ++ +G + F L
Sbjct: 471 WTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLA 529
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
LVD+ G+ G+ + A I L L W +L + HG +
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIF-SLASNPDLKCWNSMLGAYSQHGMVEKA 588
Query: 339 KLVAKKILKVEH-ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
++IL+ +A TY L + G + + +MK++G+K
Sbjct: 589 LSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIK 636
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 151/344 (43%), Gaps = 47/344 (13%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITW--TSMMTGYAQHG--LSEEALKMFT-KMQ 139
N +++ + + L +A K+F ++PQ++++T S + Y G L + +K+ + +M
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA---LINMYSKC 196
L + V + C + L +QIH L+ G T A LI+MY +C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 197 GELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG-YGNEAINLFNKMQELGFQANDVTYV 255
G L ARK+FD + R+++S+N + +AY+ + + + A L M + N T+
Sbjct: 146 GSLEQARKVFDK--MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFT 203
Query: 256 ELLTACS-------HAGLVDEGIQ--YFDKLLKNRSI----------QVKEDHYACLVDL 296
L+ C+ + L + I+ Y D ++ S+ + + C+ +
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 297 CGRA------GRLKEAFYIIEGL---------GVKLSLSVWGPLLAGCNVHGNADIGKLV 341
A G LK I +GL GV + + +L GC+ G+ +GKL+
Sbjct: 264 DAVAWNTMIVGSLKND-KIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 342 AKKILKVEH-ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+I+ + + + L +MY S G +EA V ++ + L
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNL 366
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 177/310 (57%), Gaps = 10/310 (3%)
Query: 86 AMLTGFFQN-GELNRAEKLFAELPQKDVITWTSMMTGYAQH---GLSEEALKMFTKMQAN 141
A L GF+ N G+L A LF + + D+ TW +++ YA EE L +F +MQ
Sbjct: 154 AALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ-- 211
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
++PN + V ++ +C+ L G H + K N V ++LI++YSKCG L
Sbjct: 212 --VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSF 269
Query: 202 ARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTAC 261
ARK+FD+ + QRD+ +N MI A HG+G E I L+ + G + T+V ++AC
Sbjct: 270 ARKVFDE--MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISAC 327
Query: 262 SHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSV 321
SH+GLVDEG+Q F+ + I+ K +HY CLVDL GR+GRL+EA I+ + VK + ++
Sbjct: 328 SHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATL 387
Query: 322 WGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKD 381
W L HG+ + G++ K +L +E EN+G Y LLSN+YA V +W + R MKD
Sbjct: 388 WRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKD 447
Query: 382 KGLKKQPGCS 391
+ K PG S
Sbjct: 448 HRVNKSPGIS 457
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 129/262 (49%), Gaps = 20/262 (7%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEE---ALKMFTKMQANGG--LKPNNGTF 151
L+ A + ++P V + ++++ + S + A ++ ++ ++ ++PN T+
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 152 VTVLGACSGLASL--TEGQQIHQLISK--TGFQENTRVVSALINMYSKCGELHIARKIFD 207
++ A SG + G+ +H + K + V +AL+ Y+ CG+L AR +F+
Sbjct: 116 PSLFKA-SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFE 174
Query: 208 DGLLRQRDLISWNGMIAAYAHH---GYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+R+ DL +WN ++AAYA+ E + LF +MQ + N+++ V L+ +C++
Sbjct: 175 R--IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANL 229
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
G G+ +LKN ++ + + L+DL + G L A + + + + +S +
Sbjct: 230 GEFVRGVWAHVYVLKN-NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQR-DVSCYNA 287
Query: 325 LLAGCNVHGNADIGKLVAKKIL 346
++ G VHG G + K ++
Sbjct: 288 MIRGLAVHGFGQEGIELYKSLI 309
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 200/336 (59%), Gaps = 5/336 (1%)
Query: 60 YAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
Y R+ +A ++F+ M ER++ WN M+ GF +G++ R LF ++ ++ +++W SM+
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG- 178
+ ++ G EAL++F +M + G P+ T VTVL + L L G+ IH +G
Sbjct: 207 SSLSKCGRDREALELFCEM-IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGL 265
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
F++ V +AL++ Y K G+L A IF +++R+++SWN +I+ A +G G I+L
Sbjct: 266 FKDFITVGNALVDFYCKSGDLEAATAIFRK--MQRRNVVSWNTLISGSAVNGKGEFGIDL 323
Query: 239 FNKMQELGFQA-NDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
F+ M E G A N+ T++ +L CS+ G V+ G + F +++ ++ + +HY +VDL
Sbjct: 324 FDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLM 383
Query: 298 GRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYS 357
R+GR+ EAF ++ + V + ++WG LL+ C HG+ + ++ A +++K+E N+G Y
Sbjct: 384 SRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYV 443
Query: 358 LLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWI 393
LLSN+YA G+W++ VR MK L+K G S I
Sbjct: 444 LLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 42/262 (16%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F++M ER+V W M+ G SG ++ LF +M R++VSWN+MI+ ++ R EA
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 70 LELFERMPER----------------------DMASW------------------NAMLT 89
LELF M ++ D W NA++
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
+ ++G+L A +F ++ +++V++W ++++G A +G E + +F M G + PN
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Query: 150 TFVTVLGACSGLASLTEGQQIHQL-ISKTGFQENTRVVSALINMYSKCGELHIARKIFDD 208
TF+ VL CS + G+++ L + + + T A++++ S+ G + A K F
Sbjct: 339 TFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFK-FLK 397
Query: 209 GLLRQRDLISWNGMIAAYAHHG 230
+ + W +++A HG
Sbjct: 398 NMPVNANAAMWGSLLSACRSHG 419
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 126/268 (47%), Gaps = 31/268 (11%)
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS 159
A ++F+ + +V+ + +M+ Y+ G E+L F+ M++ G + + T+ +L +CS
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRG-IWADEYTYAPLLKSCS 113
Query: 160 GLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD----------- 208
L+ L G+ +H + +TGF ++ ++ +Y+ G + A+K+FD+
Sbjct: 114 SLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNL 173
Query: 209 -------------GL-----LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAN 250
GL + +R ++SWN MI++ + G EA+ LF +M + GF +
Sbjct: 174 MIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPD 233
Query: 251 DVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYII 310
+ T V +L + G++D G + + LVD ++G L+ A I
Sbjct: 234 EATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 311 EGLGVKLSLSVWGPLLAGCNVHGNADIG 338
+ + +S W L++G V+G + G
Sbjct: 294 RKMQRRNVVS-WNTLISGSAVNGKGEFG 320
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 231/394 (58%), Gaps = 17/394 (4%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP-----LRNVVSWNAMITGYAQNRR 65
F++M E DV WT ++ +K+ ++A LF M + + ++ ++T RR
Sbjct: 221 FDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRR 280
Query: 66 LDEALELFERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
L + E+ ++ + S +++L + + G + A ++F + +K+ ++W++++ G
Sbjct: 281 LKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGG 340
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
Y Q+G E+A+++F +M+ + + F TVL AC+GLA++ G++IH + G
Sbjct: 341 YCQNGEHEKAIEIFREME-----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
N V SALI++Y K G + A +++ + R++I+WN M++A A +G G EA++ FN
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSK--MSIRNMITWNAMLSALAQNGRGEEAVSFFND 453
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAG 301
M + G + + ++++ +LTAC H G+VDEG YF + K+ I+ +HY+C++DL GRAG
Sbjct: 454 MVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAG 513
Query: 302 RLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD-IGKLVAKKILKVEHENAGTYSLLS 360
+EA ++E + S+WG LL C + +A + + +AK+++++E + +Y LLS
Sbjct: 514 LFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLS 573
Query: 361 NMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIE 394
NMY ++G+ +A N+R M +G+ K G SWI+
Sbjct: 574 NMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 165/339 (48%), Gaps = 47/339 (13%)
Query: 37 DARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP-------ERDMAS------ 83
+ R +FD +++ +SW +M++GY + +ALE+F M E ++S
Sbjct: 115 ETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACS 174
Query: 84 ---------------------WNAMLTG-----FFQNGELNRAEKLFAELPQKDVITWTS 117
WN ++ + N E A ++F E+P+ DVI WT+
Sbjct: 175 ELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTA 234
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT 177
+++ ++++ L EEAL +F M GL P+ TF TVL AC L L +G++IH +
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
G N V S+L++MY KCG + AR++F+ + +++ +SW+ ++ Y +G +AI
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNG--MSKKNSVSWSALLGGYCQNGEHEKAIE 352
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
+F +M+E + + +L AC+ V G + + ++ R + L+DL
Sbjct: 353 IFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVR-RGCFGNVIVESALIDLY 407
Query: 298 GRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
G++G + A + + ++ ++ W +L+ +G +
Sbjct: 408 GKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGE 445
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 112/228 (49%), Gaps = 7/228 (3%)
Query: 5 RGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNR 64
R FN M +++ SW+ ++ G ++G + A +F M +++ + ++ A
Sbjct: 317 REARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLA 376
Query: 65 RLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMT 120
+ E+ + R ++ +A++ + ++G ++ A ++++++ +++ITW +M++
Sbjct: 377 AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLS 436
Query: 121 GYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT-GF 179
AQ+G EEA+ F M G+KP+ +F+ +L AC + EG+ L++K+ G
Sbjct: 437 ALAQNGRGEEAVSFFNDM-VKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGI 495
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
+ T S +I++ + G A + + R D W ++ A
Sbjct: 496 KPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN-DASLWGVLLGPCA 542
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
F Q+ L + + P K S + + G EA+++ ++ +
Sbjct: 10 FSQHASLCLTPSISSSAPTKQ-----SRILELCKLGQLTEAIRILNSTHSSE-IPATPKL 63
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGE-LHIARKIFDDG 209
+ ++L C+ + S G Q H + K+G + + V ++L+++Y K G + R++FD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
+ +D ISW M++ Y +A+ +F +M G AN+ T + ACS G V
Sbjct: 124 FV--KDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRL 181
Query: 270 G 270
G
Sbjct: 182 G 182
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 194/327 (59%), Gaps = 7/327 (2%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
+L + +NG+L A KLF E+P +DV +W +++ G + EA++++ +M+ G +
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEG-I 206
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
+ + T V LGACS L + EG+ I S +N V +A I+MYSKCG + A +
Sbjct: 207 RRSEVTVVAALGACSHLGDVKEGENIFHGYS----NDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+F+ ++ +++WN MI +A HG + A+ +F+K+++ G + +DV+Y+ LTAC HA
Sbjct: 263 VFEQ-FTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHA 321
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
GLV+ G+ F+ + + ++ HY C+VDL RAGRL+EA II + + +W
Sbjct: 322 GLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQS 380
Query: 325 LLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
LL ++ + ++ ++ +++I ++ N G + LLSN+YA+ G+WK+ VR M+ K +
Sbjct: 381 LLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQV 440
Query: 385 KKQPGCSWIEVGNTVQVFVVGDKSHSQ 411
KK PG S+IE T+ F DKSH Q
Sbjct: 441 KKIPGLSYIEAKGTIHEFYNSDKSHEQ 467
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 46/263 (17%)
Query: 7 CTMAFNQMQ----ERDVSS----WTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMIT 58
C+ A +Q+ R +S+ TT++D +K+G + A LFD MP+R+V SWNA+I
Sbjct: 124 CSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIA 183
Query: 59 GYAQNRRLDEALELFERMPER-----------------------------------DMAS 83
G R EA+EL++RM ++
Sbjct: 184 GLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIV 243
Query: 84 WNAMLTGFFQNGELNRAEKLFAELP-QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
NA + + + G +++A ++F + +K V+TW +M+TG+A HG + AL++F K++ N
Sbjct: 244 SNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN- 302
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA 202
G+KP++ +++ L AC + G + ++ G + N + ++++ S+ G L A
Sbjct: 303 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREA 362
Query: 203 RKIFDDGLLRQRDLISWNGMIAA 225
I + D + W ++ A
Sbjct: 363 HDII-CSMSMIPDPVLWQSLLGA 384
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 12/246 (4%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM-----QANGGLKPNNG 149
G+L+ A ++F +P+ W +++ G+A A + M ++ + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
T L AC+ + Q+H I++ G ++ + + L++ YSK G+L A K+FD+
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE- 169
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
+ RD+ SWN +IA +EA+ L+ +M+ G + ++VT V L ACSH G V E
Sbjct: 170 -MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKE 228
Query: 270 GIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGC 329
G F N ++ V +D+ + G + +A+ + E K S+ W ++ G
Sbjct: 229 GENIFHG-YSNDNVIVSN----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 330 NVHGNA 335
VHG A
Sbjct: 284 AVHGEA 289
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 196/346 (56%), Gaps = 16/346 (4%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
+L + ++ L A K+F E+PQ DV+ W +M GY + GL E L++F +M G L
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKG-L 214
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV-SALINMYSKCGELHIAR 203
+P+ + T L AC+ + +L +G+ IH+ + K + E+ V +AL++MY+KCG + A
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ-ELGFQANDVTYVELLTACS 262
++F L +R++ SW +I YA +GY +A+ +++ E G + + V + +L AC+
Sbjct: 275 EVFKK--LTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACA 332
Query: 263 HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
H G ++EG + + I K +HY+C+VDL RAGRL +A +IE + +K SVW
Sbjct: 333 HGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVW 392
Query: 323 GPLLAGCNVHGNADIGKLVAKKILKVE----HENAGTYSLLSNMYASVGKWKEAANVRMK 378
G LL GC H N ++G+L K +L +E E LSN+Y SV + EA+ VR
Sbjct: 393 GALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGM 452
Query: 379 MKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHT 424
++ +G++K PG S +EV V FV GD SH LL +HT
Sbjct: 453 IEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPN-------LLQIHT 491
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 128/266 (48%), Gaps = 14/266 (5%)
Query: 79 RDMASWNAMLTGFFQNGELNR----AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKM 134
R+ + + +LT F LN+ A +F + + + +M+ ++ L+
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 135 FTKM--QANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG-FQENTRVVSALIN 191
F M + + P+ TF ++ AC + G+QIH + K G F ++ V + ++
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 192 MYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAND 251
+Y + L ARK+FD+ + Q D++ W+ ++ Y G G+E + +F +M G + ++
Sbjct: 161 IYVEDKLLLDARKVFDE--IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDE 218
Query: 252 VTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA--CLVDLCGRAGRLKEAFYI 309
+ LTAC+ G + +G ++ + +K +S ++ D + LVD+ + G ++ A +
Sbjct: 219 FSVTTALTACAQVGALAQG-KWIHEFVKKKS-WIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 310 IEGLGVKLSLSVWGPLLAGCNVHGNA 335
+ L + S W L+ G +G A
Sbjct: 277 FKKLTRRNVFS-WAALIGGYAAYGYA 301
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 41/204 (20%)
Query: 37 DARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------P------------- 77
DAR +FD +P +VV W+ ++ GY + E LE+F M P
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 78 ---------------------ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWT 116
E D+ A++ + + G + A ++F +L +++V +W
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 289
Query: 117 SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ-IHQLIS 175
+++ GYA +G +++A+ +++ G+KP++ + VL AC+ L EG+ + + +
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 176 KTGFQENTRVVSALINMYSKCGEL 199
+ S ++++ + G L
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRL 373
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 190/310 (61%), Gaps = 5/310 (1%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
+ +T + + GE A K+F E P++ + +W +++ G G + EA++MF M+ GL
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK-RSGL 214
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLI--SKTGFQENTRVVSALINMYSKCGELHIA 202
+P++ T V+V +C GL L+ Q+H+ + +KT + + ++++LI+MY KCG + +A
Sbjct: 215 EPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLA 274
Query: 203 RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
IF++ +RQR+++SW+ MI YA +G EA+ F +M+E G + N +T+V +L+AC
Sbjct: 275 SHIFEE--MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACV 332
Query: 263 HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
H GLV+EG YF + ++ HY C+VDL R G+LKEA ++E + +K ++ VW
Sbjct: 333 HGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVW 392
Query: 323 GPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
G L+ GC G+ ++ + VA ++++E N G Y +L+N+YA G WK+ VR MK K
Sbjct: 393 GCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTK 452
Query: 383 GLKKQPGCSW 392
+ K P S+
Sbjct: 453 KVAKIPAYSY 462
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%), Gaps = 7/223 (3%)
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
W ++M Y +H +A++++ M + L P+ + V+ A + T G+++H +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVL-PDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNE 234
+ GF + S I +Y K GE ARK+FD+ +R L SWN +I H G NE
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDEN--PERKLGSWNAIIGGLNHAGRANE 201
Query: 235 AINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED--HYAC 292
A+ +F M+ G + +D T V + +C G + Q +L+ ++ + K D
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKT-EEKSDIMMLNS 260
Query: 293 LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
L+D+ G+ GR+ A +I E + + +S W ++ G +GN
Sbjct: 261 LIDMYGKCGRMDLASHIFEEMRQRNVVS-WSSMIVGYAANGNT 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 141/285 (49%), Gaps = 15/285 (5%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALF----------DRMPLRNVVSWNAMITG 59
F++ ER + SW ++ GL +GR ++A +F D + +V + +
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGD 233
Query: 60 YAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
+ +L + + + + D+ N+++ + + G ++ A +F E+ Q++V++W+SM+
Sbjct: 234 LSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMI 293
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI-SKTG 178
GYA +G + EAL+ F +M+ G++PN TFV VL AC + EG+ ++ S+
Sbjct: 294 VGYAANGNTLEALECFRQMR-EFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFE 352
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
+ ++++ S+ G+L A+K+ ++ ++ +++ W ++ G A +
Sbjct: 353 LEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKP-NVMVWGCLMGGCEKFGDVEMAEWV 411
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
M EL ND YV L + G+ + ++ KL+K + +
Sbjct: 412 APYMVELE-PWNDGVYVVLANVYALRGMWKD-VERVRKLMKTKKV 454
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 30/196 (15%)
Query: 7 CTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRL 66
C + ++ D+ +++D K GR+D A +F+ M RNVVSW++MI GYA N
Sbjct: 243 CVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNT 302
Query: 67 DEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHG 126
EALE F +M E F P K IT+ +++ G
Sbjct: 303 LEALECFRQMRE-------------------------FGVRPNK--ITFVGVLSACVHGG 335
Query: 127 LSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV 186
L EE F M++ L+P + ++ S L E +++ + + + N V
Sbjct: 336 LVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV---VEEMPMKPNVMVW 392
Query: 187 SALINMYSKCGELHIA 202
L+ K G++ +A
Sbjct: 393 GCLMGGCEKFGDVEMA 408
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 216/393 (54%), Gaps = 20/393 (5%)
Query: 15 QERDVSSWTTMVDGLAKSGR-IDDARAL----------FDRMPLRNVVSWNAMITGYAQN 63
+ RD++SW +++ G A SG ++ RA D + L +S + + G
Sbjct: 541 ETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNL-GLVLQ 599
Query: 64 RRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYA 123
R L + + + E D N ++T + + ++ A K+F + ++ +W +++ +
Sbjct: 600 GRCFHGLAI-KSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALS 658
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
Q+ E ++F ++ L+PN TFV +L A + L S + G Q H + + GFQ N
Sbjct: 659 QNKAGREVFQLFRNLK----LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANP 714
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
V +AL++MYS CG L K+F + + + +WN +I+A+ HG G +A+ LF ++
Sbjct: 715 FVSAALVDMYSSCGMLETGMKVFRNSGVN--SISAWNSVISAHGFHGMGEKAMELFKELS 772
Query: 244 ELG-FQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
+ N +++ LL+ACSH+G +DEG+ Y+ ++ + ++ +H +VD+ GRAG+
Sbjct: 773 SNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGK 832
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNM 362
L+EA+ I G+G VWG LL+ CN HG+ +GK VA+ + ++E +NA Y L+N
Sbjct: 833 LREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANT 892
Query: 363 YASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
Y +G W+EA +R ++D LKK PG S I+V
Sbjct: 893 YVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 164/361 (45%), Gaps = 66/361 (18%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
D S +++ AK + A +F M R++VSWN ++T N ++L+ F+ M
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT 281
Query: 77 ----------------------------------------PERDMASWNAMLTGFFQNGE 96
PE ++ N++++ + + G+
Sbjct: 282 GSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGD 341
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
AE +F EL +DVI+ +++ G+A +G+ EEA + +MQ+ ++P+ T V++
Sbjct: 342 TEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITS 401
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENT-RVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
C L+ EG+ +H + Q V++++I+MY KCG A +F RD
Sbjct: 402 ICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT--TTHRD 459
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNK-MQELGFQANDV-TYVELLTACSHAGLVDEGIQY 273
L+SWN MI+A++ +G+ ++A NLF + + E + T + +LT+C +
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS--------- 510
Query: 274 FDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
D L+ +S+ C + + G L AF +E + L+ W +++GC G
Sbjct: 511 -DSLIFGKSVH-------CWLQ---KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSG 559
Query: 334 N 334
+
Sbjct: 560 H 560
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 153/328 (46%), Gaps = 21/328 (6%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNR-RLD 67
+ F RD+ SW +M+ +++G A+ LF +++ Y+ ++ L
Sbjct: 450 LLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKE-----------VVSEYSCSKFSLS 498
Query: 68 EALELFERMPERDMASWNAMLTGFFQN-GELNRAEKLFAELPQ-KDVITWTSMMTGYAQH 125
L + D + + + Q G+L A + + +D+ +W S+++G A
Sbjct: 499 TVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASS 558
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G E+L+ F M G ++ + T + + A L + +G+ H L K+ + +T++
Sbjct: 559 GHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL 618
Query: 186 VSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
+ LI MY +C ++ A K+F GL+ +L SWN +I+A + + G E LF + L
Sbjct: 619 QNTLITMYGRCKDIESAVKVF--GLISDPNLCSWNCVISALSQNKAGREVFQLF---RNL 673
Query: 246 GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKE 305
+ N++T+V LL+A + G G+Q L++ R Q A LVD+ G L+
Sbjct: 674 KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIR-RGFQANPFVSAALVDMYSSCGMLET 732
Query: 306 AFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ GV S+S W +++ HG
Sbjct: 733 GMKVFRNSGVN-SISAWNSVISAHGFHG 759
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 84/342 (24%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR---------------------- 48
F++++E+DV W +M+ L ++GR A LF M +
Sbjct: 145 FDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLS 204
Query: 49 -----------------NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGF 91
+ NA++ YA+ L A +F M RD+ SWN ++T
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 92 FQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
NG P+K +L+ F M +G + + TF
Sbjct: 265 LANGH-----------PRK--------------------SLQYFKSMTGSGQ-EADTVTF 292
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGF--QENTRVVSALINMYSKCGELHIARKIFDDG 209
V+ ACS + LT G+ +H L+ K+G+ + + V +++I+MYSKCG+ A +F++
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEE- 351
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQANDVTYVELLTACSHAGLVD 268
L RD+IS N ++ +A +G EA + N+MQ + Q + T V + + C
Sbjct: 352 -LVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSR 410
Query: 269 EGIQ---YFDKL-LKNRSIQVKEDHYACLVDLCGRAGRLKEA 306
EG Y ++ +++R+++V ++D+ G+ G +A
Sbjct: 411 EGRAVHGYTVRMEMQSRALEVINS----VIDMYGKCGLTTQA 448
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 101/184 (54%), Gaps = 3/184 (1%)
Query: 79 RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM 138
+D+A+ + +LT + + GEL + LF EL +KDVI W SM+T Q+G A+ +F +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 139 QANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGE 198
G + ++ T + A S L + +H L +TG ++ + +AL+N+Y+K
Sbjct: 180 IHKGN-EFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGEN 238
Query: 199 LHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL 258
L A +F + RD++SWN ++ +G+ +++ F M G +A+ VT+ ++
Sbjct: 239 LSSAECVFTH--MEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 259 TACS 262
+ACS
Sbjct: 297 SACS 300
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 227/432 (52%), Gaps = 21/432 (4%)
Query: 4 DRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITG 59
D CT FN TM+ G ++A ++ M R + ++ ++
Sbjct: 93 DDPCTFDFN-----------TMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 60 YAQNRRLDEALEL----FERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITW 115
+ + + E ++ F+ E D+ N+++ + + GE+ + +F +L K +W
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
+SM++ A G+ E L +F M + LK V+ L AC+ +L G IH +
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEA 235
+ + N V ++L++MY KCG L A IF + +R+ ++++ MI+ A HG G A
Sbjct: 262 RNISELNIIVQTSLVDMYVKCGCLDKALHIFQK--MEKRNNLTYSAMISGLALHGEGESA 319
Query: 236 INLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVD 295
+ +F+KM + G + + V YV +L ACSH+GLV EG + F ++LK ++ +HY CLVD
Sbjct: 320 LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVD 379
Query: 296 LCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGT 355
L GRAG L+EA I+ + ++ + +W L+ C V N ++G++ A+++LK+ N G
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGD 439
Query: 356 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEML 415
Y L+SN+Y+ W + A R ++ KGLK+ PG S +E+ FV D+SH + + +
Sbjct: 440 YLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEI 499
Query: 416 EYLLLGLHTKMK 427
+L + ++K
Sbjct: 500 YKMLHQMEWQLK 511
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 153/295 (51%), Gaps = 10/295 (3%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
+N A +F + + +M+ GY EEAL + +M G +P+N T+ +L
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN-EPDNFTYPCLLK 140
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
AC+ L S+ EG+QIH + K G + + V ++LINMY +CGE+ ++ +F+ L +
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEK--LESKTA 198
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGIQYFD 275
SW+ M++A A G +E + LF M E +A + V L AC++ G ++ G+
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 276 KLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
LL+N S ++ LVD+ + G L +A +I + + + +L+ + +++G +HG
Sbjct: 259 FLLRNIS-ELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLT-YSAMISGLALHGEG 316
Query: 336 DIGKLVAKKILK--VEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQP 388
+ + K++K +E ++ S+L N + G KE V +M +G K +P
Sbjct: 317 ESALRMFSKMIKEGLEPDHVVYVSVL-NACSHSGLVKEGRRVFAEMLKEG-KVEP 369
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 222/395 (56%), Gaps = 11/395 (2%)
Query: 47 LRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAE 106
L +V NA++ Y + + E +FE + E+ + SW +L + L R ++F E
Sbjct: 143 LTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHE 202
Query: 107 LPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTE 166
+P+++ + WT M+ GY G + E L++ +M G N T ++L AC+ +L
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVV 262
Query: 167 GQQIH-------QLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISW 219
G+ +H ++ + ++ V +AL++MY+KCG + + +F L+R+R++++W
Sbjct: 263 GRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR--LMRKRNVVTW 320
Query: 220 NGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
N + + A HG G I++F +M + +D+T+ +L+ACSH+G+VDEG + F L +
Sbjct: 321 NALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-R 378
Query: 280 NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGK 339
++ K DHYAC+VDL GRAG ++EA ++ + V + V G LL C+VHG +I +
Sbjct: 379 FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAE 438
Query: 340 LVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTV 399
+ ++++++ N L+SNMY + G+ A +R ++ +G++K PG S I V ++V
Sbjct: 439 RIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSV 498
Query: 400 QVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
F GD+SH +++ + L + +++ G + D
Sbjct: 499 HRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPD 533
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 142/295 (48%), Gaps = 43/295 (14%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELP--QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
NA+ + +GE+ A+KLF E+P +KD + WT++++ ++++GL ++K+F +M+
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA 202
++ ++ + V + G C+ L L QQ H + K G + +V +AL++MY KCG +
Sbjct: 107 -VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEV 165
Query: 203 RKIFD--------------------DGLLR---------QRDLISWNGMIAAYAHHGYGN 233
++IF+ +GL R +R+ ++W M+A Y G+
Sbjct: 166 KRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTR 225
Query: 234 EAINLFNKMQ-ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY-- 290
E + L +M G N VT +L+AC+ +G + G LK + +E Y
Sbjct: 226 EVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDD 285
Query: 291 ----ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLV 341
LVD+ + G + + + L K ++ W L +G +HG G++V
Sbjct: 286 VMVGTALVDMYAKCGNIDSSMNVFR-LMRKRNVVTWNALFSGLAMHGK---GRMV 336
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 49/234 (20%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F +++E+ V SWT ++D + K ++ R +F MP RN V+W M+ GY E L
Sbjct: 169 FEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVL 228
Query: 71 ELFERMPER-----------------------------------------DMASWNAMLT 89
EL M R + AS++ ++
Sbjct: 229 ELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMV 288
Query: 90 G------FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGG 143
G + + G ++ + +F + +++V+TW ++ +G A HG + MF +M
Sbjct: 289 GTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-- 346
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCG 197
+KP++ TF VL ACS + EG + + G + + ++++ + G
Sbjct: 347 VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAG 400
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 92/178 (51%), Gaps = 10/178 (5%)
Query: 154 VLGACSGLASLTEGQQIHQLISKTGFQENTR--VVSALINMYSKCGELHIARKIFDDGLL 211
+L C+ + L G+++H +++ +G ++ R + +AL Y+ GE+ A+K+FD+ L
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 212 RQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH---AGLVD 268
++D + W ++++++ +G ++ LF +M+ + +DV+ V L C+ G
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 269 EGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLL 326
+G K+ S++V L+D+ G+ G + E I E L K S+ W +L
Sbjct: 132 QGHGVAVKMGVLTSVKVCN----ALMDMYGKCGLVSEVKRIFEELEEK-SVVSWTVVL 184
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 211/340 (62%), Gaps = 20/340 (5%)
Query: 88 LTGFFQN-GELNRAEKLFAELPQK-DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
L GF+ + G+++ A ++F E P+K +++ WT+M++ Y ++ S EA+++F +M+A
Sbjct: 106 LVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEK--I 163
Query: 146 PNNGTFVTV-LGACSGLASLTEGQQIHQ--LISKTGFQENTRVVSALINMYSKCGELHIA 202
+G VTV L AC+ L ++ G++I+ + K + + ++L+NMY K GE A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 203 RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM------QELGFQANDVTYVE 256
RK+FD+ + ++D+ ++ MI YA +G E++ LF KM Q+ NDVT++
Sbjct: 224 RKLFDESM--RKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIG 281
Query: 257 LLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVK 316
+L ACSH+GLV+EG ++F ++ + +++ +E H+ C+VDL R+G LK+A I + +K
Sbjct: 282 VLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIK 341
Query: 317 LSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVR 376
+ +W LL C++HGN ++G+ V ++I +++ ++ G Y LSN+YAS G W E +
Sbjct: 342 PNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKS--- 398
Query: 377 MKMKDKGLKKQ-PGCSWIEVGNTVQVFVVGDKSHSQSEML 415
KM+D+ K++ PG SWIE+G+ + FV G ++ + M+
Sbjct: 399 -KMRDRVRKRRMPGKSWIELGSIINEFVSGPDNNDEQLMM 437
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 56/310 (18%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLR-NVVSWNAMITGYAQNRRLDEALELFERMPER-- 79
T++V + G +D AR +FD P + N+V W AMI+ Y +N EA+ELF+RM
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 80 ---------------------------------------DMASWNAMLTGFFQNGELNRA 100
D+ N++L + ++GE +A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 101 EKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQA-----NGGLKPNNGTFVTVL 155
KLF E +KDV T+TSM+ GYA +G ++E+L++F KM+ + + PN+ TF+ VL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 156 GACSGLASLTEGQQ-IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR 214
ACS + EG++ +I + +++++ + G L A + + ++
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 215 DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDV---TYVELLTACSHAGLVDEGI 271
+I W ++ A + HG + L ++Q F+ + YV L + G+ DE
Sbjct: 344 TVI-WRTLLGACSLHG----NVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKS 398
Query: 272 QYFDKLLKNR 281
+ D++ K R
Sbjct: 399 KMRDRVRKRR 408
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Query: 162 ASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
AS +G+QIH L+ K GF ++ ++L+ YS G++ AR++FD+ +Q +++ W
Sbjct: 79 ASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQ-NIVLWTA 137
Query: 222 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNR 281
MI+AY + EAI LF +M+ + + V L+AC+ G V G + + + +K +
Sbjct: 138 MISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRK 197
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 196/346 (56%), Gaps = 16/346 (4%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
+L + ++ L A K+F E+PQ DV+ W +M GY + GL E L++F +M G +
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG-I 214
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV-SALINMYSKCGELHIAR 203
+P+ + T L AC+ + +L +G+ IH+ + K + E+ V +AL++MY+KCG + A
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ-ELGFQANDVTYVELLTACS 262
++F+ L +R++ SW +I YA +GY +A ++++ E G + + V + +L AC+
Sbjct: 275 EVFEK--LTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACA 332
Query: 263 HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
H G ++EG + + I K +HY+C+VDL RAGRL +A +IE + +K SVW
Sbjct: 333 HGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVW 392
Query: 323 GPLLAGCNVHGNADIGKLVAKKILKVE----HENAGTYSLLSNMYASVGKWKEAANVRMK 378
G LL GC H N ++G+L + +L +E E LSN+Y SV + EA VR
Sbjct: 393 GALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGM 452
Query: 379 MKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHT 424
++ +G++K PG S +EV V FV GD SH LL +HT
Sbjct: 453 IEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPN-------LLQIHT 491
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 10/264 (3%)
Query: 79 RDMASWNAMLTGFFQNGELNR----AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKM 134
R+ + + +LT F LN+ A +F + + + +M+ ++ L+
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 135 FTKM--QANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG-FQENTRVVSALIN 191
F M + + P+ TF ++ AC + G+QIH + K G F + V + ++
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 192 MYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAND 251
+Y + L ARK+FD+ + Q D++ W+ ++ Y G G+E + +F +M G + ++
Sbjct: 161 IYVEDKLLFDARKVFDE--IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDE 218
Query: 252 VTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIE 311
+ LTAC+ G + +G + + K R I+ LVD+ + G ++ A + E
Sbjct: 219 FSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFE 278
Query: 312 GLGVKLSLSVWGPLLAGCNVHGNA 335
L + S W L+ G +G A
Sbjct: 279 KLTRRNVFS-WAALIGGYAAYGYA 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRR 65
F+++ + DV W +++G + G + +F M +R + S +T AQ
Sbjct: 174 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGA 233
Query: 66 LDEALELFE-----RMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMT 120
L + + E R E D+ A++ + + G + A ++F +L +++V +W +++
Sbjct: 234 LAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIG 293
Query: 121 GYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ-IHQLISKTGF 179
GYA +G +++A +++ G+KP++ + VL AC+ L EG+ + + ++ G
Sbjct: 294 GYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGI 353
Query: 180 QENTRVVSALINMYSKCGEL 199
S ++++ + G L
Sbjct: 354 TPKHEHYSCIVDLMCRAGRL 373
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 213/398 (53%), Gaps = 49/398 (12%)
Query: 38 ARALFDRMPLR-NVVSWNAMITGYAQNRRLDEALELFERMP----ERDMASW-------- 84
A LF R+ N +WN M+ GY + + + +ELF ++ E D AS
Sbjct: 385 AEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCS 444
Query: 85 ---------------------------NAMLTGFFQNGELNRAEKLFAELPQKDVITWTS 117
N+++ + + G+L A ++F E +VITW +
Sbjct: 445 HIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNA 503
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT 177
M+ Y SE+A+ +F +M + KP++ T VT+L AC SL GQ IH+ I++T
Sbjct: 504 MIASYVHCEQSEKAIALFDRMVSEN-FKPSSITLVTLLMACVNTGSLERGQMIHRYITET 562
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
+ N + +ALI+MY+KCG L +R++FD G Q+D + WN MI+ Y HG AI
Sbjct: 563 EHEMNLSLSAALIDMYAKCGHLEKSRELFDAG--NQKDAVCWNVMISGYGMHGDVESAIA 620
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED--HYACLVD 295
LF++M+E + T++ LL+AC+HAGLV++G + F LK VK + HY+CLVD
Sbjct: 621 LFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF---LKMHQYDVKPNLKHYSCLVD 677
Query: 296 LCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGT 355
L R+G L+EA + + +WG LL+ C HG ++G +A++ + + +N G
Sbjct: 678 LLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY 737
Query: 356 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWI 393
Y +L+NMY++ GKW+EA R M++ G+ K+ G S +
Sbjct: 738 YIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 175/337 (51%), Gaps = 15/337 (4%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQ 62
++F ++ + D+ SWT+++ LA+SG ++++ +F M P V+S G
Sbjct: 286 LSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMM 345
Query: 63 NRRLDEALELF--ERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQK-DVITWTSMM 119
+A F D N++L+ + + L+ AEKLF + ++ + W +M+
Sbjct: 346 LVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTML 405
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
GY + + +++F K+Q N G++ ++ + +V+ +CS + ++ G+ +H + KT
Sbjct: 406 KGYGKMKCHVKCIELFRKIQ-NLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSL 464
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
VV++LI++Y K G+L +A ++F + ++I+WN MIA+Y H +AI LF
Sbjct: 465 DLTISVVNSLIDLYGKMGDLTVAWRMFCEA---DTNVITWNAMIASYVHCEQSEKAIALF 521
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGR 299
++M F+ + +T V LL AC + G ++ G Q + + ++ A L+D+ +
Sbjct: 522 DRMVSENFKPSSITLVTLLMACVNTGSLERG-QMIHRYITETEHEMNLSLSAALIDMYAK 580
Query: 300 AGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
G L+++ + + G + W +++G +HG+ +
Sbjct: 581 CGHLEKSRELFDA-GNQKDAVCWNVMISGYGMHGDVE 616
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 186/451 (41%), Gaps = 83/451 (18%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
+R+ + + V +K G + DA +FD MP R+VV+W A+I+G+ QN + L +
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 76 M-----------PERDMASWNA-------------------------------MLTGFFQ 93
M P + A M + + +
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK 277
Query: 94 NGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVT 153
+G + A F EL +D+ +WTS++ A+ G EE+ MF +MQ N G+ P+
Sbjct: 278 SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ-NKGMHPDGVVISC 336
Query: 154 VLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ 213
++ + + +G+ H + + F ++ V ++L++MY K L +A K+F + +
Sbjct: 337 LINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCR-ISEE 395
Query: 214 RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQY 273
+ +WN M+ Y + I LF K+Q LG + + + ++++CSH G V G
Sbjct: 396 GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL 455
Query: 274 FDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEA--------------------------- 306
++K S+ + L+DL G+ G L A
Sbjct: 456 HCYVVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQS 514
Query: 307 ------FYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE-NAGTYSLL 359
F + K S LL C G+ + G+++ + I + EHE N + L
Sbjct: 515 EKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAAL 574
Query: 360 SNMYASVGKWKEAANVRMKMKDKGLKKQPGC 390
+MYA G +++ ++ D G +K C
Sbjct: 575 IDMYAKCGHLEKSR----ELFDAGNQKDAVC 601
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Query: 87 MLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
+++ + G+ N + ++F + ++D+ W S++ + +G +L F M +G P
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQ-SP 123
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTG-FQENTRVVSALINMYSKCGELHIARKI 205
++ T V+ AC+ L G +H L+ K G F NT V ++ + YSKCG L A +
Sbjct: 124 DHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLV 183
Query: 206 FDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGF---QANDVTYVELLTACS 262
FD+ + RD+++W +I+ + +G + KM G + N T ACS
Sbjct: 184 FDE--MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACS 241
Query: 263 HAGLVDEG 270
+ G + EG
Sbjct: 242 NLGALKEG 249
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 13/273 (4%)
Query: 8 TMAFNQMQERD--VSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYA 61
T+A+ E D V +W M+ + + A ALFDRM N ++ ++
Sbjct: 485 TVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACV 544
Query: 62 QNRRLDEALELFERMPERD----MASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTS 117
L+ + + E + ++ A++ + + G L ++ +LF QKD + W
Sbjct: 545 NTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNV 604
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT 177
M++GY HG E A+ +F +M+ + +KP TF+ +L AC+ + +G+++ + +
Sbjct: 605 MISGYGMHGDVESAIALFDQMEES-DVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY 663
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
+ N + S L+++ S+ G L A + D + W ++++ HG I
Sbjct: 664 DVKPNLKHYSCLVDLLSRSGNLEEAESTVMS-MPFSPDGVIWGTLLSSCMTHGEFEMGIR 722
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
+ + Q ND Y+ L S AG +E
Sbjct: 723 MAERAVASDPQ-NDGYYIMLANMYSAAGKWEEA 754
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRL 66
F+ ++D W M+ G G ++ A ALFD+M +V ++ A+++ +
Sbjct: 591 FDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLV 650
Query: 67 DEALELFERMPERD----MASWNAMLTGFFQNGELNRAEKLFAELP-QKDVITWTSMMTG 121
++ +LF +M + D + ++ ++ ++G L AE +P D + W ++++
Sbjct: 651 EQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSS 710
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG 178
HG E ++M + A+ N+G ++ + S E ++ +++ ++G
Sbjct: 711 CMTHGEFEMGIRMAERAVASD--PQNDGYYIMLANMYSAAGKWEEAERAREMMRESG 765
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 220/387 (56%), Gaps = 20/387 (5%)
Query: 10 AFNQMQERDVS--SWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYA 61
F++M +RD S +W +++ G A+ G+ +DA AL+ +M P R G
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 62 QNRRLDEAL--ELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
+ ++ EA+ +L + D+ NA++ + + G++ +A +F +P KD ++W SM+
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSML 268
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
TGY HGL EAL +F M NG ++P+ +VL + S G+Q+H + + G
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNG-IEPDKVAISSVLAR---VLSFKHGRQLHGWVIRRGM 324
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
+ V +ALI +YSK G+L A IFD L +RD +SWN +I+A H + + F
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQML--ERDTVSWNAIISA---HSKNSNGLKYF 379
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGR 299
+M + + +T+V +L+ C++ G+V++G + F + K I K +HYAC+V+L GR
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 300 AGRLKEAF-YIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSL 358
AG ++EA+ I++ +G++ +VWG LL C +HGN DIG++ A+++ ++E +N + L
Sbjct: 440 AGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFEL 499
Query: 359 LSNMYASVGKWKEAANVRMKMKDKGLK 385
L +Y+ + ++ VR M D+GL+
Sbjct: 500 LIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
F ++L C L ++ G ++H LI + N + S L+ +Y+ CG +A ++FD
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
R +WN +I+ YA G +A+ L+ +M E G + + T+ +L AC G V G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 271 IQYFDKLLKNRSIQVKEDHYA--CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
L+K D Y LV + + G + +A + + + K +S W +L G
Sbjct: 215 EAIHRDLVKE---GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS-WNSMLTG 270
Query: 329 CNVHG 333
HG
Sbjct: 271 YLHHG 275
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 236/427 (55%), Gaps = 16/427 (3%)
Query: 14 MQERDVSSWTTMVDGLAKSGRIDDARALFDRM----------PLRNVVSWNAMITGYAQN 63
+ +DV WT M+ GL + GR + A +F M + +VV+ A + +
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 64 RRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYA 123
+ + D + N+++T + + G L+++ +F + ++D+++W ++++GYA
Sbjct: 366 ASVHGYV--LRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYA 423
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
Q+ +AL +F +M+ + ++ T V++L ACS +L G+ IH ++ ++ + +
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCS 483
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
V +AL++MYSKCG L A++ FD + +D++SW +IA Y HG G+ A+ ++++
Sbjct: 484 LVDTALVDMYSKCGYLEAAQRCFDS--ISWKDVVSWGILIAGYGFHGKGDIALEIYSEFL 541
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRL 303
G + N V ++ +L++CSH G+V +G++ F ++++ ++ +H AC+VDL RA R+
Sbjct: 542 HSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRI 601
Query: 304 KEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMY 363
++AF + + S+ V G +L C +G ++ ++ + +++++ +AG Y L + +
Sbjct: 602 EDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSF 661
Query: 364 ASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYLLLGLH 423
A++ +W + + +M+ GLKK PG S IE+ F + SHS + LL L
Sbjct: 662 AAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTV--SLLKLLS 719
Query: 424 TKMKKFG 430
+M +FG
Sbjct: 720 REMMQFG 726
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 184/375 (49%), Gaps = 57/375 (15%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
D++ +M++ K + DA+ LFD+M R++VSWN MI+GYA + E L+L RM
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 77 -----PER---------------------------------DMASWNAMLTGFFQNGELN 98
P++ DM A++T + + G+
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE 297
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
+ ++ +P KDV+ WT M++G + G +E+AL +F++M +G ++ +V+ +C
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGS-DLSSEAIASVVASC 356
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
+ L S G +H + + G+ +T +++LI MY+KCG L + IF+ + +RDL+S
Sbjct: 357 AQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFER--MNERDLVS 414
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQAND-VTYVELLTACSHAGLVDEGIQYFDKL 277
WN +I+ YA + +A+ LF +M+ Q D T V LL ACS AG + G KL
Sbjct: 415 WNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG-----KL 469
Query: 278 LKNRSIQVKEDHYAC------LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNV 331
+ I ++ C LVD+ + G L+ A + + K +S WG L+AG
Sbjct: 470 I--HCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGF 526
Query: 332 HGNADIGKLVAKKIL 346
HG DI + + L
Sbjct: 527 HGKGDIALEIYSEFL 541
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 165/325 (50%), Gaps = 12/325 (3%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRR 65
F +M+ERDV WT M+ +++G + +A +L + M + + V+ M++G + +
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQ 162
Query: 66 LDEALELFERMP--ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYA 123
L + L F + + D+A N+ML + + + A+ LF ++ Q+D+++W +M++GYA
Sbjct: 163 L-QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYA 221
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
G E LK+ +M+ + GL+P+ TF L + L G+ +H I KTGF +
Sbjct: 222 SVGNMSEILKLLYRMRGD-GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDM 280
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
+ +ALI MY KCG+ + ++ + + +D++ W MI+ G +A+ +F++M
Sbjct: 281 HLKTALITMYLKCGKEEASYRVLET--IPNKDVVCWTVMISGLMRLGRAEKALIVFSEML 338
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRL 303
+ G + ++ +C+ G D G +L++ + L+ + + G L
Sbjct: 339 QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH-GYTLDTPALNSLITMYAKCGHL 397
Query: 304 KEAFYIIEGLGVKLSLSVWGPLLAG 328
++ I E + + L W +++G
Sbjct: 398 DKSLVIFERMNER-DLVSWNAIISG 421
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 175/377 (46%), Gaps = 46/377 (12%)
Query: 47 LRNVVSWNAMITGYAQNRRLDEALELFERMP----ERDMASWNAMLTGFFQNGELNRAEK 102
L + ++ +++ A +RL L + +++ D ++++ + + G L A K
Sbjct: 43 LPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARK 102
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
+F E+ ++DV+ WT+M+ Y++ G+ EA + +M+ G+KP VT+L SG+
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQ-GIKPGP---VTLLEMLSGVL 158
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
+T+ Q +H GF + V+++++N+Y KC + A+ +FD + QRD++SWN M
Sbjct: 159 EITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ--MEQRDMVSWNTM 216
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL----TACS-------HAGLVDEGI 271
I+ YA G +E + L +M+ G + + T+ L T C H +V G
Sbjct: 217 ISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF 276
Query: 272 QYFDKLLKNRSIQV------KEDHYACL------------VDLCG--RAGRLKEAFYIIE 311
D LK I + +E Y L V + G R GR ++A +
Sbjct: 277 D-VDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFS 335
Query: 312 GL---GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE-NAGTYSLLSNMYASVG 367
+ G LS ++A C G+ D+G V +L+ + + + L MYA G
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395
Query: 368 KWKEAANVRMKMKDKGL 384
++ + +M ++ L
Sbjct: 396 HLDKSLVIFERMNERDL 412
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 85/145 (58%), Gaps = 3/145 (2%)
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+ S + + HG ++ L F+ M AN L P+ TF ++L AC+ L L+ G IHQ +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANK-LLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNE 234
GF + + S+L+N+Y+K G L ARK+F++ +R+RD++ W MI Y+ G E
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEE--MRERDVVHWTAMIGCYSRAGIVGE 130
Query: 235 AINLFNKMQELGFQANDVTYVELLT 259
A +L N+M+ G + VT +E+L+
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEMLS 155
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 218/409 (53%), Gaps = 49/409 (11%)
Query: 30 AKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------PE----- 78
A+ G++++AR FD M R++VSWNAMI GY N D + LF+ M P+
Sbjct: 159 ARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFG 218
Query: 79 ----------------------------RDMASWNAMLTGFFQNGELNRAEKLFAELPQK 110
R A +++ + + G L A KL ++
Sbjct: 219 SLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR 278
Query: 111 DVITWTSMMTGYAQ-HGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
D+++ T+++TG++Q + + +A +F M K + ++L C+ +AS+T G+Q
Sbjct: 279 DLLSCTALITGFSQQNNCTSDAFDIFKDM-IRMKTKMDEVVVSSMLKICTTIASVTIGRQ 337
Query: 170 IHQLISKTG-FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAH 228
IH K+ + + + ++LI+MY+K GE+ A F++ ++++D+ SW +IA Y
Sbjct: 338 IHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEE--MKEKDVRSWTSLIAGYGR 395
Query: 229 HGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED 288
HG +AI+L+N+M+ + NDVT++ LL+ACSH G + G + +D ++ I+ +E+
Sbjct: 396 HGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREE 455
Query: 289 HYACLVDLCGRAGRLKEAFYII---EGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
H +C++D+ R+G L+EA+ +I EG+ V LS S WG L C HGN + K+ A ++
Sbjct: 456 HLSCIIDMLARSGYLEEAYALIRSKEGI-VSLSSSTWGAFLDACRRHGNVQLSKVAATQL 514
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG-LKKQPGCSWI 393
L +E Y L+++YA+ G W A N R MK+ G K PG S +
Sbjct: 515 LSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 164/333 (49%), Gaps = 13/333 (3%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRL 66
F+++ +RDV SWT M+ ++ G DA LF M +V ++ +++ L
Sbjct: 70 FDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCL 129
Query: 67 DEALELFERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
E +++ + + + A +A+L+ + + G++ A F + ++D+++W +M+ GY
Sbjct: 130 KEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGY 189
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
+ ++ + +F M G KP+ TF ++L A + L ++H L K GF +
Sbjct: 190 TANACADTSFSLFQLMLTEGK-KPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRS 248
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA-HHGYGNEAINLFNK 241
+ ++ +L+N Y KCG L A K+ + ++RDL+S +I ++ + ++A ++F
Sbjct: 249 SALIRSLVNAYVKCGSLANAWKLHEGT--KKRDLLSCTALITGFSQQNNCTSDAFDIFKD 306
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAG 301
M + + ++V +L C+ V G Q LK+ I+ L+D+ ++G
Sbjct: 307 MIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSG 366
Query: 302 RLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGN 334
+++A E + K + W L+AG HGN
Sbjct: 367 EIEDAVLAFEEMKEK-DVRSWTSLIAGYGRHGN 398
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ + G++ A KLF + ++DV++WT+M++ +++ G +AL +F +M +K N T
Sbjct: 57 YLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRED-VKANQFT 115
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
+ +VL +C L L EG QIH + K N V SAL+++Y++CG++ AR FD
Sbjct: 116 YGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDS-- 173
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA 260
+++RDL+SWN MI Y + + + +LF M G + + T+ LL A
Sbjct: 174 MKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 10/170 (5%)
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
IH GF N ++ LI++Y K G++ ARK+FD + +RD++SW MI+ ++
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDR--ISKRDVVSWTAMISRFSRC 91
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNR---SIQVK 286
GY +A+ LF +M +AN TY +L +C G + EG+Q + K ++ V+
Sbjct: 92 GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR 151
Query: 287 EDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ L+ L R G+++EA + + + L W ++ G + AD
Sbjct: 152 ----SALLSLYARCGKMEEARLQFDSMKER-DLVSWNAMIDGYTANACAD 196
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 242/465 (52%), Gaps = 63/465 (13%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
DV +++D +K +D A +FD RN+VSWN+++ G+ N+R DEALE+F M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 77 -------------------------P-------------ERDMASWNAMLTGFFQNGELN 98
P E + + ++++ + ++
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
A + + KDV++ ++M++G A G S+EA+ +F M+ PN T +++L AC
Sbjct: 381 DAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLNAC 436
Query: 159 SGLASLTEGQQIHQLISKTGFQEN-TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI 217
S A L + H + + N V +++++ Y+KCG + +AR+ FD + ++++I
Sbjct: 437 SVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQ--ITEKNII 494
Query: 218 SWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
SW +I+AYA +G ++A+ LF++M++ G+ N VTY+ L+AC+H GLV +G+ F +
Sbjct: 495 SWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM 554
Query: 278 LK---NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLG--VKLSLSVWGPLLAGC-NV 331
++ S+Q HY+C+VD+ RAG + A +I+ L VK S WG +L+GC N
Sbjct: 555 VEEDHKPSLQ----HYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNR 610
Query: 332 HGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 391
I V ++L++E + Y L S+ +A+ W++ A +R +K++ ++ G S
Sbjct: 611 FKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYS 670
Query: 392 WIEVGNTVQVFVVGDK-SHSQSEMLEYLLLGLHTKMKKFGDILDD 435
+ GN + F+ GDK S S SE L ++ LH MK LDD
Sbjct: 671 MVREGNLAKRFLAGDKLSQSDSE-LNDVVQSLHRCMK-----LDD 709
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 110/201 (54%), Gaps = 14/201 (6%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N++L + + L+ A KLF E+ ++DVI+W+ ++ Y Q LK+F +M
Sbjct: 164 NSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 222
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQ-ENTRVVSALINMYSKCGELHIAR 203
+P+ T +VL AC+ + + G+ +H + GF + V ++LI+MYSK ++ A
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAF 282
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
++FD+ R+++SWN ++A + H+ +EA+ +F+ M + + ++VT V LL C
Sbjct: 283 RVFDETTC--RNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC-- 338
Query: 264 AGLVDEGIQYFDKLLKNRSIQ 284
++F++ L +SI
Sbjct: 339 --------KFFEQPLPCKSIH 351
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 138/287 (48%), Gaps = 20/287 (6%)
Query: 53 WNAMITGYAQNRR----LDEALELFERMPERDMASW----NAMLTGFFQNGELNRAEKLF 104
W +++GY++ +R ++ SW N++ + + G+L + F
Sbjct: 25 WREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREF 84
Query: 105 AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
+ +D ++W ++ G +G EE L F+K++ G +PN T V V+ AC L
Sbjct: 85 DCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV-WGFEPNTSTLVLVIHACRSL--W 141
Query: 165 TEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIA 224
+G++IH + ++GF + V ++++ MY+ L ARK+FD+ + +RD+ISW+ +I
Sbjct: 142 FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDE--MSERDVISWSVVIR 198
Query: 225 AYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
+Y + LF +M E + + VT +L AC+ +D G ++ R
Sbjct: 199 SYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIR-RGF 257
Query: 284 QVKEDHYAC--LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ D + C L+D+ + + AF + + + +S W +LAG
Sbjct: 258 DLA-DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVS-WNSILAG 302
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 217/420 (51%), Gaps = 56/420 (13%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
E ++ + T ++ AK GR A F+R+P+++ V++NA+ GY Q ++A ++++
Sbjct: 433 ESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN 492
Query: 76 M------PE-RDMASW--------------------------------NAMLTGFFQNGE 96
M P+ R M +A++ F +
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDA 552
Query: 97 LNRAEKLFAELP-QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL 155
L A LF + +K ++W MM GY HG +EEA+ F +M+ +PN TFV ++
Sbjct: 553 LAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK-FQPNAVTFVNIV 611
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
A + L++L G +H + + GF T V ++L++MY+KCG + + K F + + +
Sbjct: 612 RAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIE--ISNKY 669
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFD 275
++SWN M++AYA HG + A++LF MQE + + V+++ +L+AC HAGLV+EG + F+
Sbjct: 670 IVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFE 729
Query: 276 KLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
++ + I+ + +HYAC+VDL G+AG EA ++ + VK S+ VWG LL +H N
Sbjct: 730 EMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNL 789
Query: 336 DIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
+ +++K+E N YS + E NV +KK P CSWIEV
Sbjct: 790 WLSNAALCQLVKLEPLNPSHYS-------QDRRLGEVNNV------SRIKKVPACSWIEV 836
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 182/417 (43%), Gaps = 53/417 (12%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDM--- 81
++D + A ++F+ + ++ SW M+ YA N +E LELF+ M D+
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMN 299
Query: 82 ------------------------------------ASWNAMLTGFFQNGELNRAEKLFA 105
+ ++++ + + GEL AE+LF
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ +DV++W++M+ Y Q G +EA+ +F M +KPN T +VL C+G+A+
Sbjct: 360 NIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM-RIHIKPNAVTLTSVLQGCAGVAASR 418
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G+ IH K + +A+I+MY+KCG A K F+ L +D +++N +
Sbjct: 419 LGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFER--LPIKDAVAFNALAQG 476
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
Y G N+A +++ M+ G + T V +L C+ G + +++K+
Sbjct: 477 YTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS- 535
Query: 286 KEDHYA-CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKK 344
E H A L+++ + L A + + G + S W ++ G +HG A+ ++
Sbjct: 536 -ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQ 594
Query: 345 ILKVE--HENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTV 399
+KVE NA T+ + A + + +V + G CS VGN++
Sbjct: 595 -MKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF-----CSQTPVGNSL 645
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 4/173 (2%)
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
FQ +L+R +F + V+ W SM+ GY + GL EAL F M G+ P+
Sbjct: 44 SLFQRQDLSRV--IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKY 101
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
+F L AC+G +G +IH LI++ G + + + +AL+ MY K +L AR++FD
Sbjct: 102 SFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDK- 160
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
+ +D+++WN M++ A +G + A+ LF+ M+ + V+ L+ A S
Sbjct: 161 -MHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 45/282 (15%)
Query: 34 RIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER-------------- 79
R D +R +FD + VV WN+MI GY + EAL F M E
Sbjct: 48 RQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFAL 107
Query: 80 --------------------------DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
D+ A++ + + +L A ++F ++ KDV+
Sbjct: 108 KACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVV 167
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
TW +M++G AQ+G S AL +F M++ + ++ + ++ A S L + +H L
Sbjct: 168 TWNTMVSGLAQNGCSSAALLLFHDMRS-CCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGL 226
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
+ K GF S LI+MY C +L+ A +F++ + ++D SW M+AAYAH+G+
Sbjct: 227 VIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEE--VWRKDESSWGTMMAAYAHNGFFE 282
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFD 275
E + LF+ M+ + N V L A ++ G + +GI D
Sbjct: 283 EVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHD 324
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 204/415 (49%), Gaps = 41/415 (9%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D+S T++V ++ G + A L+ ++V ++++ YA+ +D A+ F +
Sbjct: 280 DISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTR 339
Query: 78 ERDMASWNAMLTGFFQ------------------------------NGELNRAEK----- 102
+ M L G NG + K
Sbjct: 340 QLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVE 399
Query: 103 ----LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
LF +L + +I+W S+++G Q G + A ++F +M GGL P+ T ++L C
Sbjct: 400 TVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGC 459
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS 218
S L L G+++H + F+ V +ALI+MY+KCG A +F ++ +
Sbjct: 460 SQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKS--IKAPCTAT 517
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
WN MI+ Y+ G + A++ + +M+E G + +++T++ +L+AC+H G VDEG F ++
Sbjct: 518 WNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMI 577
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
K I HYA +V L GRA EA Y+I + +K +VWG LL+ C +H ++G
Sbjct: 578 KEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVG 637
Query: 339 KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWI 393
+ VA+K+ ++++N G Y L+SN+YA+ W + VR MKD G G S I
Sbjct: 638 EYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 190/440 (43%), Gaps = 85/440 (19%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
+R V T++++ K G + A+ LFD MP R+ V WNA+I GY++N +A +LF
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIV 141
Query: 76 M----------------P-----------------------ERDMASWNAMLTGFFQNGE 96
M P E D NA+++ + + E
Sbjct: 142 MLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAE 201
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM-QANGGLKPNNGTFVTVL 155
L AE LF E+ K ++W +M+ Y+Q GL EEA+ +F M + N + P VT++
Sbjct: 202 LGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISP-----VTII 256
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
L++ + +H L+ K G + VV++L+ YS+CG L A +++ +Q
Sbjct: 257 NL---LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASA--KQDS 311
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG----- 270
++ +++ YA G + A+ F+K ++L + + V V +L C + +D G
Sbjct: 312 IVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHG 371
Query: 271 -----------------IQYFDKLLKNRSI-----QVKED---HYACLVDLCGRAGRLKE 305
I + K ++ Q++E + ++ C ++GR
Sbjct: 372 YAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRAST 431
Query: 306 AFYIIEGL----GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAG-TYSLLS 360
AF + + G+ LLAGC+ ++GK + L+ EN + L
Sbjct: 432 AFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALI 491
Query: 361 NMYASVGKWKEAANVRMKMK 380
+MYA G +A +V +K
Sbjct: 492 DMYAKCGNEVQAESVFKSIK 511
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR-----NVVSWNAMITGYAQNRR 65
F Q+QE + SW +++ G +SGR A +F +M L + ++ +++ G +Q
Sbjct: 405 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464
Query: 66 LDEALELFERMPERDMASWN----AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
L+ EL + + N A++ + + G +AE +F + TW SM++G
Sbjct: 465 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 524
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
Y+ GL AL + +M+ GLKP+ TF+ VL AC+ + EG+
Sbjct: 525 YSLSGLQHRALSCYLEMREK-GLKPDEITFLGVLSACNHGGFVDEGK 570
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 110 KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS-GLASLT-EG 167
+D+ + S++ +S + +F + L PN+ T L A + S +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDL-LRSSLTPNHFTMSIFLQATTTSFNSFKLQV 69
Query: 168 QQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYA 227
+Q+ ++K+G V ++L+N+Y K G + A+ +FD+ + +RD + WN +I Y+
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDE--MPERDTVVWNALICGYS 127
Query: 228 HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
+GY +A LF M + GF + T V LL C G V +G
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 216/405 (53%), Gaps = 49/405 (12%)
Query: 33 GRIDDARALFDRMPLR-NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGF 91
G+I DAR +FD MP + V+++ ++ GY Q + AL+LF M + ++ + L F
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF 233
Query: 92 F---------------------------------------QNGELNRAEKLFAELPQKDV 112
+ G ++ A ++F +KDV
Sbjct: 234 LSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDV 293
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
+TW M+ YA+ GL EE + + +M+ +KPN+ TFV +L +C+ + G+ +
Sbjct: 294 VTWNCMIDQYAKTGLLEECVWLLRQMKYEK-MKPNSSTFVGLLSSCAYSEAAFVGRTVAD 352
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
L+ + + + +AL++MY+K G L A +IF+ ++ +D+ SW MI+ Y HG
Sbjct: 353 LLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNR--MKDKDVKSWTAMISGYGAHGLA 410
Query: 233 NEAINLFNKMQE--LGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
EA+ LFNKM+E + N++T++ +L ACSH GLV EGI+ F ++++ S K +HY
Sbjct: 411 REAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHY 470
Query: 291 ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH 350
C+VDL GRAG+L+EA+ +I L + + W LLA C V+GNAD+G+ V ++ ++
Sbjct: 471 GCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGE 530
Query: 351 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
+ LL+ +A G +++ + + +KG +K+ G S IE+
Sbjct: 531 THPADAILLAGTHAVAGNPEKSLDNEL---NKG-RKEAGYSAIEI 571
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 45/338 (13%)
Query: 38 ARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER----DMASW--------- 84
A ++F+ + N+ +N MI GY+ + + A +F ++ + D S+
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 85 --------------------------NAMLTGFFQNGELNRAEKLFAELPQK-DVITWTS 117
NA++ + G+++ A K+F E+PQ D +T+++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT 177
+M GY Q AL +F M+ + N T ++ L A S L L+ + H L K
Sbjct: 198 LMNGYLQVSKKALALDLFRIMR-KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKI 256
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
G + +++ALI MY K G + AR+IFD + ++D+++WN MI YA G E +
Sbjct: 257 GLDLDLHLITALIGMYGKTGGISSARRIFDCAI--RKDVVTWNCMIDQYAKTGLLEECVW 314
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
L +M+ + N T+V LL++C+++ G D LL+ I + LVD+
Sbjct: 315 LLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD-LLEEERIALDAILGTALVDMY 373
Query: 298 GRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
+ G L++A I + K + W +++G HG A
Sbjct: 374 AKVGLLEKAVEIFNRMKDK-DVKSWTAMISGYGAHGLA 410
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 42/270 (15%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D+ T ++ K+G I AR +FD ++VV+WN MI YA+ L+E + L +M
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMK 320
Query: 78 ERDMASWNAMLTGFFQN---------------------------------------GELN 98
M ++ G + G L
Sbjct: 321 YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLE 380
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM-QANGGLKPNNGTFVTVLGA 157
+A ++F + KDV +WT+M++GY HGL+ EA+ +F KM + N ++PN TF+ VL A
Sbjct: 381 KAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNA 440
Query: 158 CSGLASLTEG-QQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
CS + EG + +++ F ++++ + G+L A ++ + L D
Sbjct: 441 CSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRN-LPITSDS 499
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELG 246
+W ++AA +G + ++ ++ E+G
Sbjct: 500 TAWRALLAACRVYGNADLGESVMMRLAEMG 529
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 156/335 (46%), Gaps = 42/335 (12%)
Query: 88 LTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPN 147
L F ++ A +F + ++ + +M+ GY+ E A +F +++A G L +
Sbjct: 66 LLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKG-LTLD 124
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD 207
+F+T L +CS ++ G+ +H + ++GF T + +ALI+ Y CG++ ARK+FD
Sbjct: 125 RFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFD 184
Query: 208 DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG-- 265
+ + + D ++++ ++ Y A++LF M++ N T + L+A S G
Sbjct: 185 E-MPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDL 243
Query: 266 --------------------LVDEGIQYFDK---LLKNRSI---QVKED--HYACLVDLC 297
L+ I + K + R I +++D + C++D
Sbjct: 244 SGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQY 303
Query: 298 GRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAG 354
+ G L+E +++ + +K + S + LL+ C A +G+ VA + E E
Sbjct: 304 AKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLL---EEERIA 360
Query: 355 TYSLLS----NMYASVGKWKEAANVRMKMKDKGLK 385
++L +MYA VG ++A + +MKDK +K
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVK 395
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 193/357 (54%), Gaps = 6/357 (1%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N+++ Y LD A +LF +P+RD+ SWN+++ G +NG++ A KLF E+P K++I
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
+W M++ Y ++ +F +M G + N T V +L AC A L EG+ +H
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREM-VRAGFQGNESTLVLLLNACGRSARLKEGRSVHAS 275
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
+ +T + + +ALI+MY KC E+ +AR+IFD L R+ ++WN MI A+ HG
Sbjct: 276 LIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDS--LSIRNKVTWNVMILAHCLHGRPE 333
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
+ LF M + ++VT+V +L C+ AGLV +G Y+ ++ I+ H C+
Sbjct: 334 GGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCM 393
Query: 294 VDLCGRAGRLKEAFYIIEGLG---VKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH 350
+L AG +EA ++ L V + W LL+ GN +G+ +AK +++ +
Sbjct: 394 ANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453
Query: 351 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDK 407
N Y LL N+Y+ G+W++ VR +K++ + + PGC +++ V +G K
Sbjct: 454 LNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCK 510
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 41/227 (18%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEAL 70
F ++ +RD+ SW +++ G+ ++G + A LFD MP +N++SWN MI+ Y ++
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 71 ELFERMPE-----------------------RDMASWNAMLTGFFQNG------------ 95
LF M ++ S +A L F N
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 96 ----ELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
E+ A ++F L ++ +TW M+ + HG E L++F M NG L+P+ TF
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM-INGMLRPDEVTF 354
Query: 152 VTVLGACSGLASLTEGQQIHQL-ISKTGFQENTRVVSALINMYSKCG 197
V VL C+ +++GQ + L + + + N + N+YS G
Sbjct: 355 VGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAG 401
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA 202
G P++ TFV+++ + G+ H K G + V ++L++MY+ CG L +A
Sbjct: 113 GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLA 172
Query: 203 RKIFDD--------------GLLRQ---------------RDLISWNGMIAAYAHHGYGN 233
+K+F + G++R +++ISWN MI+AY
Sbjct: 173 KKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPG 232
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK---NRSIQVKEDHY 290
+I+LF +M GFQ N+ T V LL AC + + EG L++ N S+ +
Sbjct: 233 VSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVID---- 288
Query: 291 ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG 338
L+D+ G+ + A I + L ++ ++ W ++ +HG + G
Sbjct: 289 TALIDMYGKCKEVGLARRIFDSLSIRNKVT-WNVMILAHCLHGRPEGG 335
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP----E 78
T ++D K + AR +FD + +RN V+WN MI + + R + LELFE M
Sbjct: 289 TALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLR 348
Query: 79 RDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVIT------WTSMMTGYAQHGLSEEAL 132
D ++ +L G + G +++ + ++ + + I W M Y+ G EEA
Sbjct: 349 PDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWC-MANLYSSAGFPEEAE 407
Query: 133 KMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINM 192
+ + + + P + + +L + + T G+ I + + +T N + L+N+
Sbjct: 408 EALKNL-PDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETD-PLNYKYYHLLMNI 465
Query: 193 YSKCGE 198
YS G
Sbjct: 466 YSVTGR 471
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 222/444 (50%), Gaps = 55/444 (12%)
Query: 37 DARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER----DMASWNAMLTGFF 92
+A +F+ + +N+V+WN+MI + +A+ +F RM D A+ + + +
Sbjct: 213 EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLY 272
Query: 93 QNGELNRAE------------------------------------------KLFAELPQ- 109
++ +L E KLF E+
Sbjct: 273 KSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHC 332
Query: 110 KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
+D++ W ++T +A + E A+ +F +++ L P+ TF +VL AC+GL +
Sbjct: 333 RDIVAWNGIITAFAVYD-PERAIHLFGQLRQEK-LSPDWYTFSSVLKACAGLVTARHALS 390
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
IH + K GF +T + ++LI+ Y+KCG L + ++FDD + RD++SWN M+ AY+ H
Sbjct: 391 IHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDD--MDSRDVVSWNSMLKAYSLH 448
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH 289
G + + +F KM + T++ LL+ACSHAG V+EG++ F + + + +H
Sbjct: 449 GQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNH 505
Query: 290 YACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILK-V 348
YAC++D+ RA R EA +I+ + + VW LL C HGN +GKL A K+ + V
Sbjct: 506 YACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELV 565
Query: 349 EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKS 408
E N+ +Y +SN+Y + G + EA +M+ ++K+P SW E+GN V F G +
Sbjct: 566 EPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRH 625
Query: 409 HSQSEMLEYLLLGLHTKMKKFGDI 432
E + L L + +K+ G +
Sbjct: 626 RPDKEAVYRELKRLISWLKEMGYV 649
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 125/245 (51%), Gaps = 22/245 (8%)
Query: 29 LAKSGRIDDARALFDRMP--LRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA-SWN 85
L +SG I A +LF P L++ ++ A+ A+ R L + + L M S N
Sbjct: 36 LVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQN 95
Query: 86 AMLTGFFQN-----GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQA 140
+L F N G + A ++F +P+++V++WT+++TGY Q G +E +F+ M +
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS 155
Query: 141 NGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGE-- 198
+ PN T +VL +C G+Q+H L K G + V +A+I+MY +C +
Sbjct: 156 H--CFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGA 209
Query: 199 -LHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
+ A +F+ ++ ++L++WN MIAA+ G +AI +F +M G + T L
Sbjct: 210 AAYEAWTVFEA--IKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT---L 264
Query: 258 LTACS 262
L CS
Sbjct: 265 LNICS 269
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 182/417 (43%), Gaps = 81/417 (19%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA-- 82
+++ AK G I AR +FD MP RNVVSW A+ITGY Q E LF M
Sbjct: 102 LINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNE 161
Query: 83 -SWNAMLTG----------------------FFQNGELN------------RAEKLFAEL 107
+ +++LT + N ++ A +F +
Sbjct: 162 FTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAI 221
Query: 108 PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG-GLKPNNGTFVTVLGACSGL---AS 163
K+++TW SM+ + L ++A+ +F +M ++G G T+L CS L +
Sbjct: 222 KFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDR-----ATLLNICSSLYKSSD 276
Query: 164 LTEGQ------QIHQLISKTGFQENTRVVSALINMYSKCGELHI-ARKIFDDGLLRQRDL 216
L + Q+H L K+G T V +ALI +YS+ E + K+F + + RD+
Sbjct: 277 LVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFME-MSHCRDI 335
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS-----------HAG 265
++WNG+I A+A + AI+LF ++++ + T+ +L AC+ HA
Sbjct: 336 VAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQ 394
Query: 266 LVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPL 325
++ G D +L N I YA + G L + + + + +S W +
Sbjct: 395 VIKGGF-LADTVLNNSLIHA----YA-------KCGSLDLCMRVFDDMDSRDVVS-WNSM 441
Query: 326 LAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
L ++HG D V +K + + ++A +LLS + G+ +E + M +K
Sbjct: 442 LKAYSLHGQVDSILPVFQK-MDINPDSATFIALLSAC-SHAGRVEEGLRIFRSMFEK 496
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 44/254 (17%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP-ERDMA 82
+++ AK G +D +FD M R+VVSWN+M+ Y+ + ++D L +F++M D A
Sbjct: 409 SLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSA 468
Query: 83 SWNAMLTGFFQNGELNRAEKLFAE-------LPQKD----VITWTSMMTGYAQHGLSEEA 131
++ A+L+ G + ++F LPQ + VI S +A+ +EE
Sbjct: 469 TFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAE---AEEV 525
Query: 132 LKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ----QIHQLISKTGFQENTRVVS 187
+K + P+ ++ +LG+C + G+ ++ +L+ T N+
Sbjct: 526 IKQMP-------MDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPT----NSMSYI 574
Query: 188 ALINMYSKCG---ELHIARKIFDDGLLRQRDLISWNGM------IAAYAHHGYGNEAI-- 236
+ N+Y+ G E +++ K + +R+ +SW + A+ H EA+
Sbjct: 575 QMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYR 634
Query: 237 ---NLFNKMQELGF 247
L + ++E+G+
Sbjct: 635 ELKRLISWLKEMGY 648
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 7 CTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR-NVVSWNAMITGYAQNRR 65
C F+ M RDV SW +M+ + G++D +F +M + + ++ A+++ + R
Sbjct: 423 CMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGR 482
Query: 66 LDEALELFERMPERD-----MASWNAMLTGFFQNGELNRAEKLFAELP-QKDVITWTSMM 119
++E L +F M E+ + + ++ + AE++ ++P D + W +++
Sbjct: 483 VEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALL 542
Query: 120 TGYAQHG 126
+HG
Sbjct: 543 GSCRKHG 549
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 222/405 (54%), Gaps = 11/405 (2%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRR 65
F M +V SWTT++ GL G + D L M R NVV+ + ++ ++ R
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRH 442
Query: 66 LDEALE----LFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
+ LE L R + +M N+++ + + +++ A + + ++D IT+TS++T
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR 502
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
+ + G E AL + M +G ++ + + + A + L +L G+ +H K+GF
Sbjct: 503 FNELGKHEMALSVINYMYGDG-IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSG 561
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
V+++L++MYSKCG L A+K+F++ + D++SWNG+++ A +G+ + A++ F +
Sbjct: 562 AASVLNSLVDMYSKCGSLEDAKKVFEE--IATPDVVSWNGLVSGLASNGFISSALSAFEE 619
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAG 301
M+ + + VT++ LL+ACS+ L D G++YF + K +I+ + +HY LV + GRAG
Sbjct: 620 MRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAG 679
Query: 302 RLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSN 361
RL+EA ++E + +K + ++ LL C GN +G+ +A K L + + Y LL++
Sbjct: 680 RLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLAD 739
Query: 362 MYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGD 406
+Y GK + A R M +K L K+ G S +EV V FV D
Sbjct: 740 LYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSED 784
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 158/308 (51%), Gaps = 22/308 (7%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N +L+ + + + A KLF E+ + V WT M++ + + AL +F +M A+G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG-T 120
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
PN TF +V+ +C+GL ++ G ++H + KTGF+ N+ V S+L ++YSKCG+ A +
Sbjct: 121 HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACE 180
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+F L+ D ISW MI++ EA+ +++M + G N+ T+V+LL A S
Sbjct: 181 LFSS--LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL 238
Query: 265 GLVDEGIQYFDKLLKN----RSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLS 320
GL F K + + R I + LVD + ++++A ++ G + +
Sbjct: 239 GL------EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ-DVF 291
Query: 321 VWGPLLAGC--NVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASV-----GKWKEAA 373
+W +++G N+ +G + + L ++ N TYS + ++ ++V GK +
Sbjct: 292 LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF-TYSAILSLCSAVRSLDFGKQIHSQ 350
Query: 374 NVRMKMKD 381
+++ +D
Sbjct: 351 TIKVGFED 358
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 42/279 (15%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM-----P 77
+++ D +K G+ +A LF + + +SW MI+ R+ EAL+ + M P
Sbjct: 163 SSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVP 222
Query: 78 ERDMA-------------------SWNAMLTG--------------FFQNGELNRAEKLF 104
+ N ++ G + Q ++ A ++
Sbjct: 223 PNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVL 282
Query: 105 AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
++DV WTS+++G+ ++ ++EA+ F +M++ G L+PNN T+ +L CS + SL
Sbjct: 283 NSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG-LQPNNFTYSAILSLCSAVRSL 341
Query: 165 TEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI-ARKIFDDGLLRQRDLISWNGMI 223
G+QIH K GF+++T V +AL++MY KC + A ++F G + +++SW +I
Sbjct: 342 DFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF--GAMVSPNVVSWTTLI 399
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
HG+ + L +M + + N VT +L ACS
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 153/331 (46%), Gaps = 13/331 (3%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQNRRL 66
F++M R V +WT M+ KS A +LF+ M N ++++++ A R +
Sbjct: 81 FDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDI 140
Query: 67 DEALELFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
+ + E + +++ + + G+ A +LF+ L D I+WT M++
Sbjct: 141 SYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSL 200
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
EAL+ +++M G+ PN TFV +LGA S L L G+ IH I G N
Sbjct: 201 VGARKWREALQFYSEM-VKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLN 258
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
+ ++L++ YS+ ++ A ++ + ++D+ W +++ + + EA+ F +M
Sbjct: 259 VVLKTSLVDFYSQFSKMEDAVRVLNSS--GEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
+ LG Q N+ TY +L+ CS +D G Q + +K + D LVD+ +
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVDMYMKCSA 375
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
+ + G V ++ W L+ G HG
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHG 406
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 152 VTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL 211
+ +L C +S G IH + K G EN + + L+++Y K + ARK+FD+ +
Sbjct: 28 IRILSFCESNSSRI-GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDE--M 84
Query: 212 RQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGI 271
R + +W MI+A+ A++LF +M G N+ T+ ++ +C+ + G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 272 QYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL 313
+ ++K + + L DL + G+ KEA + L
Sbjct: 145 RVHGSVIKT-GFEGNSVVGSSLSDLYSKCGQFKEACELFSSL 185
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 184/324 (56%), Gaps = 17/324 (5%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHG-----LSEEALKMFTKMQ 139
+L + +NG+L A K+F E+P++ +TW +M+ GY H + +A+ +F +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 140 ANG-GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV--SALINMYSKC 196
G G++P + T V VL A S L G +H I K GF V +AL++MYSKC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 197 GELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVE 256
G L+ A +F+ L++ +++ +W M A +G GNE NL N+M E G + N++T+
Sbjct: 271 GCLNNAFSVFE--LMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTS 328
Query: 257 LLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVK 316
LL+A H GLV+EGI+ F + + +HY C+VDL G+AGR++EA+ I + +K
Sbjct: 329 LLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
Query: 317 LSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHEN---AGT----YSLLSNMYASVGKW 369
+ L C+++G +G+ + K +L++E E+ +G+ Y LSN+ A GKW
Sbjct: 389 PDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKW 448
Query: 370 KEAANVRMKMKDKGLKKQPGCSWI 393
E +R +MK++ +K +PG S++
Sbjct: 449 VEVEKLRKEMKERRIKTRPGYSFV 472
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQ-----NRRLDEALELFERM- 76
TT++ AK+G + AR +FD MP R V+WNAMI GY N +A+ LF R
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 77 ------------------------------------------PERDMASWNAMLTGFFQN 94
PE D+ A++ + +
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
G LN A +F + K+V TWTSM TG A +G E + +M A G+KPN TF ++
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM-AESGIKPNEITFTSL 329
Query: 155 LGACSGLASLTEGQQIHQ-LISKTGFQENTRVVSALINMYSKCGELHIA 202
L A + + EG ++ + + ++ G ++++ K G + A
Sbjct: 330 LSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEA 378
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 21/271 (7%)
Query: 128 SEEALKMFTKMQANGGL-KPNNGTFVTVLGACSGLAS---LTEGQQIHQLISKTGFQENT 183
E+++++F + L N TFV VLGAC+ AS L G+ +H ++ K GF +
Sbjct: 87 PEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYES 146
Query: 184 RVV-SALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAY-AHHGYGN----EAIN 237
++ + L++ Y+K G+L ARK+FD+ + +R ++WN MI Y +H GN +A+
Sbjct: 147 ELIGTTLLHFYAKNGDLRYARKVFDE--MPERTSVTWNAMIGGYCSHKDKGNHNARKAMV 204
Query: 238 LFNKMQEL--GFQANDVTYVELLTACSHAGLVDEGI---QYFDKLLKNRSIQVKEDHYAC 292
LF + G + D T V +L+A S GL++ G Y +KL + V
Sbjct: 205 LFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIG--TA 262
Query: 293 LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA-DIGKLVAKKILKVEHE 351
LVD+ + G L AF + E + VK ++ W + G ++G + L+ +
Sbjct: 263 LVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLALNGRGNETPNLLNRMAESGIKP 321
Query: 352 NAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
N T++ L + Y +G +E + MK +
Sbjct: 322 NEITFTSLLSAYRHIGLVEEGIELFKSMKTR 352
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 36/193 (18%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
E DV T +VD +K G +++A ++F+ M ++NV +W +M TG A N R +E L R
Sbjct: 254 EVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNR 313
Query: 76 MPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMF 135
M E + + + IT+TS+++ Y GL EE +++F
Sbjct: 314 MAESGI---------------------------KPNEITFTSLLSAYRHIGLVEEGIELF 346
Query: 136 TKMQANGGLKP---NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINM 192
M+ G+ P + G V +LG + Q+ +Q I + + ++ +L N
Sbjct: 347 KSMKTRFGVTPVIEHYGCIVDLLGKAGRI------QEAYQFILAMPIKPDAILLRSLCNA 400
Query: 193 YSKCGELHIARKI 205
S GE + +I
Sbjct: 401 CSIYGETVMGEEI 413
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 207/413 (50%), Gaps = 46/413 (11%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPL---RNVVSWNAMITGYAQNRRLDEALELFERMPER 79
+ ++D + G + A +F + L +V WN+M++G+ N + AL L ++ +
Sbjct: 277 SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQS 336
Query: 80 DMASWNAMLTGFFQ---------------------------------------NGELNRA 100
D+ + L+G + G + A
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDA 396
Query: 101 EKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSG 160
KLF LP KD+I ++ ++ G + G + A +F ++ GL + +L CS
Sbjct: 397 HKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL-IKLGLDADQFIVSNILKVCSS 455
Query: 161 LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWN 220
LASL G+QIH L K G++ +AL++MY KCGE+ +FD G+L +RD++SW
Sbjct: 456 LASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFD-GML-ERDVVSWT 513
Query: 221 GMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN 280
G+I + +G EA F+KM +G + N VT++ LL+AC H+GL++E + +
Sbjct: 514 GIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSE 573
Query: 281 RSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKL 340
++ +HY C+VDL G+AG +EA +I + ++ ++W LL C H NA + +
Sbjct: 574 YGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTV 633
Query: 341 VAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWI 393
+A+K+LK ++ Y+ LSN YA++G W + + VR K G K+ G SWI
Sbjct: 634 IAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 171/380 (45%), Gaps = 45/380 (11%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM------------------------ 45
F++M ER++ +WTTMV G G+ + A L+ RM
Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVG 121
Query: 46 ---------------PLR-NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLT 89
LR +VV N+++ Y +N RL EA F+ + SWN +++
Sbjct: 122 DIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLIS 181
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
G+ + G ++ A LF +PQ +V++W +++G+ G S AL+ +MQ GL +
Sbjct: 182 GYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQRE-GLVLDGF 239
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF-DD 208
L ACS LT G+Q+H + K+G + + +SALI+MYS CG L A +F +
Sbjct: 240 ALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQE 299
Query: 209 GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVD 268
L + WN M++ + + A+ L ++ + + T L C + +
Sbjct: 300 KLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLR 359
Query: 269 EGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
G+Q L+ ++ + LVDL G +++A + L K ++ G L+ G
Sbjct: 360 LGLQ-VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG-LIRG 417
Query: 329 CNVHGNADIGKLVAKKILKV 348
C G + + ++++K+
Sbjct: 418 CVKSGFNSLAFYLFRELIKL 437
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 126/268 (47%), Gaps = 43/268 (16%)
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
L+ A K+F E+ +++++TWT+M++GY G +A++++ +M + N + VL
Sbjct: 56 LSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLK 115
Query: 157 ACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL 216
AC + + G +++ I K + + +++++++MY K G L A F + +LR
Sbjct: 116 ACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKE-ILRPSS- 173
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT----------------- 259
SWN +I+ Y G +EA+ LF++M Q N V++ L++
Sbjct: 174 TSWNTLISGYCKAGLMDEAVTLFHRMP----QPNVVSWNCLISGFVDKGSPRALEFLVRM 229
Query: 260 -----------------ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
ACS GL+ G Q ++K+ ++ + L+D+ G
Sbjct: 230 QREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGS 288
Query: 303 LKEAFYII--EGLGVKLSLSVWGPLLAG 328
L A + E L V S++VW +L+G
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 124/294 (42%), Gaps = 43/294 (14%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFER 75
E D + +VD A G I DA LF R+P +++++++ +I G ++ A LF
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 76 MP---------------------------------------ERDMASWNAMLTGFFQNGE 96
+ E + + A++ + + GE
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 97 LNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLG 156
++ LF + ++DV++WT ++ G+ Q+G EEA + F KM N G++PN TF+ +L
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM-INIGIEPNKVTFLGLLS 552
Query: 157 ACSGLASLTEGQQ-IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRD 215
AC L E + + + S+ G + ++++ + G A ++ + L + D
Sbjct: 553 ACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPL-EPD 611
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
W ++ A H + K+ + GF + Y L A + G+ D+
Sbjct: 612 KTIWTSLLTACGTHKNAGLVTVIAEKLLK-GFPDDPSVYTSLSNAYATLGMWDQ 664
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 158 CSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI 217
C + + G+ I + K G +N + + +I+MY L A K+FD+ + +R+++
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDE--MSERNIV 72
Query: 218 SWNGMIAAYAHHGYGNEAINLFNKMQELGFQ-ANDVTYVELLTACSHAGLVDEGIQYFDK 276
+W M++ Y G N+AI L+ +M + + AN+ Y +L AC G + GI +++
Sbjct: 73 TWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYER 132
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
+ K +++ +VD+ + GRL EA + + ++ S + W L++G
Sbjct: 133 IGK-ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISG 182
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 209/411 (50%), Gaps = 43/411 (10%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM------ 76
+ +V +K+G I +A LF +P ++ WN MI GY D+ + LF M
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 77 ---------------PERDMASWN------------------AMLTGFFQNGELNRAEKL 103
P + +W+ A++ + + + A +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 104 FAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS 163
F + + D++ +S++TGY++ G +EAL +F +++ +G KP+ VLG+C+ L+
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK-KPDCVLVAIVLGSCAELSD 323
Query: 164 LTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMI 223
G+++H + + G + + +V SALI+MYSKCG L A +F + +++++S+N +I
Sbjct: 324 SVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAG--IPEKNIVSFNSLI 381
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSI 283
HG+ + A F ++ E+G +++T+ LL C H+GL+++G + F+++ I
Sbjct: 382 LGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGI 441
Query: 284 QVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAK 343
+ + +HY +V L G AG+L+EAF + L + + G LL+ C VH N + ++VA+
Sbjct: 442 EPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAE 501
Query: 344 KILKVEHENAGTYS-LLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWI 393
I K E Y +LSN+YA G+W E +R + + K PG SW
Sbjct: 502 NIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISWF 552
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 152/361 (42%), Gaps = 48/361 (13%)
Query: 17 RDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM 76
RD T + A + + AR LFD P R+V WN++I YA+ + L LF ++
Sbjct: 38 RDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQI 97
Query: 77 PERDMASWN---------------------------------------AMLTGFFQNGEL 97
D N A++ + + G +
Sbjct: 98 LRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLI 157
Query: 98 NRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGA 157
A KLF +P D+ W M+ GY G ++ + +F MQ G +PN T V +
Sbjct: 158 VEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH-QPNCYTMVALTSG 216
Query: 158 CSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI 217
+ L +H K ++ V AL+NMYS+C + A +F+ + + DL+
Sbjct: 217 LIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNS--ISEPDLV 274
Query: 218 SWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
+ + +I Y+ G EA++LF +++ G + + V +L +C+ G + +
Sbjct: 275 ACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYV 334
Query: 278 LKNRSIQVKEDHYAC--LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNA 335
++ + ++ D C L+D+ + G LK A + G+ K ++ + L+ G +HG A
Sbjct: 335 IR---LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEK-NIVSFNSLILGLGLHGFA 390
Query: 336 D 336
Sbjct: 391 S 391
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 204/374 (54%), Gaps = 7/374 (1%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASW 84
++D K G +DDA +F M ++ VSWNA++ ++N +L+ L F +MP D ++
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTY 257
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N ++ F ++G+ N A ++ +++P + +W +++TGY S EA + FTKM ++ G+
Sbjct: 258 NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS-GV 316
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
+ + + VL A + LA + G IH K G V SALI+MYSKCG L A
Sbjct: 317 RFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAEL 376
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSH 263
+F + +++LI WN MI+ YA +G EAI LFN++ QE + + T++ LL CSH
Sbjct: 377 MF--WTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSH 434
Query: 264 AGLVDEG-IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
+ E + YF+ ++ I+ +H L+ G+ G + +A +I+ G W
Sbjct: 435 CEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAW 494
Query: 323 GPLLAGCNVHGNADIGKLVAKKILKV--EHENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
LL C+ + K VA K++++ ++ Y ++SN+YA +W+E +R M+
Sbjct: 495 RALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMR 554
Query: 381 DKGLKKQPGCSWIE 394
+ G+ K+ G SWI+
Sbjct: 555 ESGVLKEVGSSWID 568
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 149/326 (45%), Gaps = 32/326 (9%)
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
+W++++ A+ G S L+ ++ N G KP+ V +L ++ +Q+H
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVEL-INDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
++K GF NTR+ ++L+ Y L A K+FD+ + D+ISWN +++ Y G
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDE--MPDPDVISWNSLVSGYVQSGRFQ 138
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA-- 291
E I LF ++ N+ ++ L AC+ L G KL+K + +++ +
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK---LGLEKGNVVVG 195
Query: 292 -CLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH 350
CL+D+ G+ G + +A + + + K ++S W ++A C+ +G ++G ++ +
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVS-WNAIVASCSRNGKLELGLWFFHQM---PN 251
Query: 351 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQV-FVVGDKSH 409
+ TY+ L + + G + A V M + SW NT+ +V +KS
Sbjct: 252 PDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPN-----SSSW----NTILTGYVNSEKSG 302
Query: 410 SQSEMLEYLLLGLHTKMKKFGDILDD 435
+E TKM G D+
Sbjct: 303 EATEFF--------TKMHSSGVRFDE 320
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 141/352 (40%), Gaps = 80/352 (22%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N+++ Y + L++A ++F+ MP+ D+ SWN++++G+ Q+G LF EL + DV
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
PN +F L AC+ L G IH
Sbjct: 154 --------------------------------PNEFSFTAALAACARLHLSPLGACIHSK 181
Query: 174 ISKTGFQENTRVV-SALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
+ K G ++ VV + LI+MY KCG + A +F + ++D +SWN ++A+ + +G
Sbjct: 182 LVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQH--MEEKDTVSWNAIVASCSRNGKL 239
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC 292
+ F++M + VTY EL+ A +G + Q + S
Sbjct: 240 ELGLWFFHQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWN------ 289
Query: 293 LVDLCG-----RAGRLKEAFYIIEGLGVKL---SLSV------------WGPLLAGCNVH 332
L G ++G E F + GV+ SLS+ WG L+ C
Sbjct: 290 -TILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHK 348
Query: 333 GNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
D +VA S L +MY+ G K A + M K L
Sbjct: 349 LGLDSRVVVA--------------SALIDMYSKCGMLKHAELMFWTMPRKNL 386
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 188/342 (54%), Gaps = 6/342 (1%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
+ + Y + L+ + ++F+ + + + N++L +NGE++ A + F +P DV+
Sbjct: 125 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 184
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQAN--GGLKPNNGTFVTVLGACSGL--ASLTEGQQ 169
+WT+++ G+++ GL +AL +F +M N + PN TFV+VL +C+ + G+Q
Sbjct: 185 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQ 244
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
IH + T + +AL++MY K G+L +A IFD +R + + +WN +I+A A +
Sbjct: 245 IHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQ--IRDKKVCAWNAIISALASN 302
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH 289
G +A+ +F M+ N +T + +LTAC+ + LVD GIQ F + I +H
Sbjct: 303 GRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEH 362
Query: 290 YACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVE 349
Y C+VDL GRAG L +A I+ L + SV G LL C +H N ++G V K+++ ++
Sbjct: 363 YGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQ 422
Query: 350 HENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 391
++ G Y LS A W EA +R M + G++K P S
Sbjct: 423 PQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 117/258 (45%), Gaps = 37/258 (14%)
Query: 110 KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
K + +++ Y G + +L +FT M A+ ++PNN TF +++ A S++ G
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASH-VQPNNLTFPSLIKAACSSFSVSYGVA 107
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL------------------- 210
+H K GF + V ++ + Y + G+L +RK+FDD L
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 211 ----------LRQRDLISWNGMIAAYAHHGYGNEAINLFNKM---QELGFQANDVTYVEL 257
+ D++SW +I ++ G +A+ +F +M + N+ T+V +
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 258 LTACSH--AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGV 315
L++C++ G + G Q ++ ++ I + L+D+ G+AG L+ A I + +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVM-SKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD 286
Query: 316 KLSLSVWGPLLAGCNVHG 333
K + W +++ +G
Sbjct: 287 K-KVCAWNAIISALASNG 303
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 183/316 (57%), Gaps = 9/316 (2%)
Query: 100 AEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS 159
A K+F E+ +++V++W S+MT ++G + F +M P+ T V +L AC
Sbjct: 167 ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKR-FCPDETTMVVLLSACG 225
Query: 160 GLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISW 219
G +L+ G+ +H + + N R+ +AL++MY+K G L AR +F+ + +++ +W
Sbjct: 226 G--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFER--MVDKNVWTW 281
Query: 220 NGMIAAYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
+ MI A +G+ EA+ LF+KM +E + N VT++ +L ACSH GLVD+G +YF ++
Sbjct: 282 SAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEME 341
Query: 279 KNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD-- 336
K I+ HY +VD+ GRAGRL EA+ I+ + + VW LL+ C++H + D
Sbjct: 342 KIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDE 401
Query: 337 -IGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
IG+ V K+++++E + +G +++N +A W EAA VR MK+ +KK G S +E+
Sbjct: 402 GIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLEL 461
Query: 396 GNTVQVFVVGDKSHSQ 411
G + F G S+
Sbjct: 462 GGSFHRFFSGYDPRSE 477
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 122/239 (51%), Gaps = 17/239 (7%)
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
TW + GY+ E++ ++++M+ G +KPN TF +L AC+ LT G+QI
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRG-IKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGN 233
+ K GF + V + LI++Y C + ARK+FD+ + +R+++SWN ++ A +G N
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDE--MTERNVVSWNSIMTALVENGKLN 196
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC- 292
F +M F ++ T V LL+AC G KL+ ++ + V+E C
Sbjct: 197 LVFECFCEMIGKRFCPDETTMVVLLSACG-------GNLSLGKLVHSQ-VMVRELELNCR 248
Query: 293 ----LVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILK 347
LVD+ ++G L+ A + E + V ++ W ++ G +G A+ + K++K
Sbjct: 249 LGTALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMK 306
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 137/327 (41%), Gaps = 79/327 (24%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM- 76
DV ++ + DAR +FD M RNVVSWN+++T +N +L+ E F M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 77 -----P-------------------------------ERDMASWNAMLTGFFQNGELNRA 100
P E + A++ + ++G L A
Sbjct: 207 GKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 101 EKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSG 160
+F + K+V TW++M+ G AQ+G +EEAL++F+KM ++PN TF+ VL ACS
Sbjct: 267 RLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSH 326
Query: 161 LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWN 220
+ +G + F E ++ H + + +I +
Sbjct: 327 TGLVDDGYKY--------FHEMEKI--------------HKIKPM----------MIHYG 354
Query: 221 GMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS-HAGLVDEGIQYFDKLLK 279
M+ G NEA + KM F+ + V + LL+ACS H DEGI + +K
Sbjct: 355 AMVDILGRAGRLNEAYDFIKKMP---FEPDAVVWRTLLSACSIHHDEDDEGI---GEKVK 408
Query: 280 NRSIQVKEDHYACLVDLCGRAGRLKEA 306
R I+++ LV + A R EA
Sbjct: 409 KRLIELEPKRSGNLVIV---ANRFAEA 432
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM----PLR-NVVSWNAMITGYAQN 63
+ F +M +++V +W+ M+ GLA+ G ++A LF +M +R N V++ ++ +
Sbjct: 268 LVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHT 327
Query: 64 RRLDEALELFERMPERD-----MASWNAMLTGFFQNGELNRAEKLFAELP-QKDVITWTS 117
+D+ + F M + M + AM+ + G LN A ++P + D + W +
Sbjct: 328 GLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRT 387
Query: 118 MMTGYAQH------GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIH 171
+++ + H G+ E+ K +++ +G V V + E ++
Sbjct: 388 LLSACSIHHDEDDEGIGEKVKKRLIELEPK-----RSGNLVIVANRFAEARMWAEAAEVR 442
Query: 172 QLISKTGFQE 181
+++ +T ++
Sbjct: 443 RVMKETKMKK 452
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 192/343 (55%), Gaps = 7/343 (2%)
Query: 54 NAMITGYAQNRRLDEALELFERMPE-RDMASWNAMLTGFFQNGELNRAEKLFAELP---- 108
A+I Y++ R A +F + + R++ SWN++++G NG+ A +LF +L
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 109 QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQ 168
+ D TW S+++G++Q G EA K F +M + + P+ ++L ACS + +L G+
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPSLKCLTSLLSACSDIWTLKNGK 388
Query: 169 QIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAH 228
+IH + K + + V+++LI+MY KCG AR+IFD + +D + WN MI+ Y
Sbjct: 389 EIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGK 448
Query: 229 HGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED 288
HG AI +F ++E + + T+ +L+ACSH G V++G Q F + + + +
Sbjct: 449 HGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE 508
Query: 289 HYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKV 348
H C++DL GR+GRL+EA +I+ + S LL C H + +G+ A K+ ++
Sbjct: 509 HIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSS-LLGSCRQHLDPVLGEEAAMKLAEL 567
Query: 349 EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 391
E EN + +LS++YA++ +W++ ++R + K L K PG S
Sbjct: 568 EPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 143/297 (48%), Gaps = 37/297 (12%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELF--ER 75
DV + T +V K ++ DA + D MP R + S NA ++G +N +A +F R
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDAR 124
Query: 76 MPERDMASWN--------------------AMLTGF--------------FQNGELNRAE 101
+ M S AM +GF + GE A
Sbjct: 125 VSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAA 184
Query: 102 KLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGL 161
++F ++P K V+T+ + ++G ++G+ +F M+ +PN+ TFV + AC+ L
Sbjct: 185 RMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASL 244
Query: 162 ASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
+L G+Q+H L+ K FQ T V +ALI+MYSKC A +F + L R+LISWN
Sbjct: 245 LNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTE-LKDTRNLISWNS 303
Query: 222 MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
+I+ +G A+ LF K+ G + + T+ L++ S G V E ++F+++L
Sbjct: 304 VISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 155/298 (52%), Gaps = 15/298 (5%)
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
D+ + A+++ + + ++ A K+ E+P++ + + + ++G ++G +A +MF +
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDAR 124
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
+G N+ T +VLG C + G Q+H L K+GF+ V ++L++MYS+CGE
Sbjct: 125 VSGS-GMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEW 180
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGF-QANDVTYVELL 258
+A ++F+ + + ++++N I+ +G N ++FN M++ + NDVT+V +
Sbjct: 181 VLAARMFEK--VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAI 238
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLS 318
TAC+ + G Q ++K + Q + L+D+ + K A+ + L +
Sbjct: 239 TACASLLNLQYGRQLHGLVMK-KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRN 297
Query: 319 LSVWGPLLAGCNVHGNADIGKLVAKKI----LKVEHENAGTYSLLSNMYASVGKWKEA 372
L W +++G ++G + + +K+ LK ++ T++ L + ++ +GK EA
Sbjct: 298 LISWNSVISGMMINGQHETAVELFEKLDSEGLK---PDSATWNSLISGFSQLGKVIEA 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKI 205
PN TF +L +C+ L + +G+ +H + KTGF + +AL++MY K ++ A K+
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 206 FDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAG 265
D+ + +R + S N ++ +G+ +A +F + G N VT +L C G
Sbjct: 89 LDE--MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---G 143
Query: 266 LVDEGIQ 272
++ G+Q
Sbjct: 144 DIEGGMQ 150
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 32/146 (21%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRM--PLRNVVSWNAMITGYAQNRRLDEALELF 73
ERD+ T+++D K G AR +FDR ++ V WN MI+GY ++ + A+E+F
Sbjct: 400 ERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIF 459
Query: 74 ERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALK 133
EL R EK+ + + T+T++++ + G E+ +
Sbjct: 460 ----------------------ELLREEKV-----EPSLATFTAVLSACSHCGNVEKGSQ 492
Query: 134 MFTKMQANGGLKPNN---GTFVTVLG 156
+F MQ G KP+ G + +LG
Sbjct: 493 IFRLMQEEYGYKPSTEHIGCMIDLLG 518
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 210/394 (53%), Gaps = 44/394 (11%)
Query: 40 ALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERM-------PE-------------- 78
++F MP RN+ SWN +I ++++ ++++LF RM P+
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 79 RDMASWN-------------------AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
R+ S + A++ + G+L A KLF ++P +D + +T+M
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
GY Q G + L MF +M G ++ V++L AC L +L G+ +H +
Sbjct: 208 GGYVQQGEAMLGLAMFREM-GYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCS 266
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
+ +A+ +MY KC L A +F + + +RD+ISW+ +I Y G + LF
Sbjct: 267 CLGLNLGNAITDMYVKCSILDYAHTVFVN--MSRRDVISWSSLILGYGLDGDVVMSFKLF 324
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGR 299
++M + G + N VT++ +L+AC+H GLV++ YF +L++ +I + HYA + D R
Sbjct: 325 DEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF-RLMQEYNIVPELKHYASVADCMSR 383
Query: 300 AGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLL 359
AG L+EA +E + VK +V G +L+GC V+GN ++G+ VA+++++++ A Y L
Sbjct: 384 AGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTL 443
Query: 360 SNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWI 393
+ +Y++ G++ EA ++R MK+K + K PGCS I
Sbjct: 444 AGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 203/366 (55%), Gaps = 14/366 (3%)
Query: 24 TMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMAS 83
++D K ++ AR +FD++ R WN MI+GY + +EA +LF+ MPE D+ S
Sbjct: 141 VIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVS 200
Query: 84 WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGG 143
W M+TGF + +L A K F +P+K V++W +M++GYAQ+G +E+AL++F M G
Sbjct: 201 WTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM-LRLG 259
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR 203
++PN T+V V+ ACS A + + + +LI + + N V +AL++M++KC ++ AR
Sbjct: 260 VRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSAR 319
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
+IF++ L QR+L++WN MI+ Y G + A LF+ M + N V++ L+ +H
Sbjct: 320 RIFNE-LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP----KRNVVSWNSLIAGYAH 374
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLSLS 320
G I++F+ ++ + E ++ CG L+ I++ + +KL+ S
Sbjct: 375 NGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDS 434
Query: 321 VWGPLLAGCNVHGNADIGKLVAKKIL-KVEHENAGTYSLLSNMYASVGKWKEAANVRMKM 379
+ L+ GN AK++ +++ + +Y+ L +A+ G E N+ KM
Sbjct: 435 GYRSLIFMYARGGNL----WEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKM 490
Query: 380 KDKGLK 385
KD+G++
Sbjct: 491 KDEGIE 496
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 178/323 (55%), Gaps = 47/323 (14%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFD---RMPLR-NVVSW------------- 53
F++M E+ V SW M+ G A++G +DA LF+ R+ +R N +W
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 54 ----------------------NAMITGYAQNRRLDEALELFERM-PERDMASWNAMLTG 90
A++ +A+ R + A +F + +R++ +WNAM++G
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
Query: 91 FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGT 150
+ + G+++ A +LF +P+++V++W S++ GYA +G + A++ F M G KP+ T
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT 400
Query: 151 FVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGL 210
++VL AC +A L G I I K + N +LI MY++ G L A+++FD+
Sbjct: 401 MISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDE-- 458
Query: 211 LRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
+++RD++S+N + A+A +G G E +NL +KM++ G + + VTY +LTAC+ AGL+ EG
Sbjct: 459 MKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEG 518
Query: 271 IQYFDKLLKNRSIQVKEDHYACL 293
+ F K ++N DHYAC+
Sbjct: 519 QRIF-KSIRN----PLADHYACM 536
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 143/354 (40%), Gaps = 72/354 (20%)
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
+F + +V SM +++ ++ + L+++ + ++ G+ P+ +F V+ +
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQ-RSRCGIMPDAFSFPVVIKSAGRFG 120
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD-------------- 208
L + L+ K GF ++ V + +++MY K + ARK+FD
Sbjct: 121 ILFQA-----LVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 209 ---------------GLLRQRDLISW-------------------------------NGM 222
++ + D++SW N M
Sbjct: 176 GYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAM 235
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGI-QYFDKLLKNR 281
++ YA +G+ +A+ LFN M LG + N+ T+V +++ACS D + + KL+ +
Sbjct: 236 LSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA--DPSLTRSLVKLIDEK 293
Query: 282 SIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLV 341
+++ L+D+ + ++ A I LG + +L W +++G G+ + +
Sbjct: 294 RVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQL 353
Query: 342 AKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEV 395
+ K N +++ L YA G+ A M D G K + I V
Sbjct: 354 FDTMPK---RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISV 404
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 218/429 (50%), Gaps = 54/429 (12%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDE 68
+ Q E S T ++D +K G + D+ +F+ + +++VSWNA+++G+ +N + E
Sbjct: 109 LMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKE 168
Query: 69 ALELFERMPE-------------------------------------RDMASWNAMLTGF 91
AL +F M RD+ + F
Sbjct: 169 ALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISF 228
Query: 92 FQN-GELNRAEKLFAEL-PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
+ + G +N A K++ L D + S+++G ++ +EA + ++ +PN
Sbjct: 229 YSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ------RPNVR 282
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
+ L CS + L G+QIH + + GF ++++ + L++MY KCG++ AR IF
Sbjct: 283 VLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRA- 341
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE--LGFQANDVTYVELLTACSHAGLV 267
+ + ++SW MI AYA +G G +A+ +F +M E G N VT++ +++AC+HAGLV
Sbjct: 342 -IPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLV 400
Query: 268 DEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL----GVKLSLSVWG 323
EG + F + + + +HY C +D+ +AG +E + ++E + + ++W
Sbjct: 401 KEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWV 460
Query: 324 PLLAGCNVHGNADIGKLVAKKIL-KVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
+L+ C+++ + G+ VA++++ + ENA Y L+SN YA++GKW +R K+K+K
Sbjct: 461 AVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNK 520
Query: 383 GLKKQPGCS 391
GL K G S
Sbjct: 521 GLVKTAGHS 529
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 130/259 (50%), Gaps = 9/259 (3%)
Query: 73 FERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEAL 132
F R+ + S N +L F A+ LF ELPQ+D+ + S ++ + + G + L
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 133 KMFTKM-QANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALIN 191
+F ++ +A+ L + TF VLGACS L+ G+Q+H L+ K G + T +ALI+
Sbjct: 70 ALFLQIHRASPDLSSH--TFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALID 127
Query: 192 MYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAND 251
MYSK G L + ++F+ + ++DL+SWN +++ + +G G EA+ +F M + ++
Sbjct: 128 MYSKYGHLVDSVRVFES--VEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISE 185
Query: 252 VTYVELLTACSHAGLVDEGIQYFDK-LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYII 310
T ++ C+ ++ +G Q ++ R + V ++ G + EA +
Sbjct: 186 FTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLG---TAMISFYSSVGLINEAMKVY 242
Query: 311 EGLGVKLSLSVWGPLLAGC 329
L V + L++GC
Sbjct: 243 NSLNVHTDEVMLNSLISGC 261
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 189/352 (53%), Gaps = 44/352 (12%)
Query: 3 EDRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL--------------- 47
E + ++ FNQ+Q +W M+ L+ + + +A LF M +
Sbjct: 67 ETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVI 126
Query: 48 -------------------------RNVVSWNAMITGYAQNRRLDEALELFERMPERDMA 82
+V N ++ Y + + D ++F++MP R +
Sbjct: 127 KACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIV 186
Query: 83 SWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
SW ML G N +L+ AE +F ++P ++V++WT+M+T Y ++ +EA ++F +MQ +
Sbjct: 187 SWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD 246
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA 202
+KPN T V +L A + L SL+ G+ +H K GF + + +ALI+MYSKCG L A
Sbjct: 247 -VKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDA 305
Query: 203 RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG-FQANDVTYVELLTAC 261
RK+FD +++ + L +WN MI + HG G EA++LF +M+E + + +T+V +L+AC
Sbjct: 306 RKVFD--VMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSAC 363
Query: 262 SHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL 313
++ G V +G++YF ++++ I +H AC++ L +A +++A ++E +
Sbjct: 364 ANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 35/270 (12%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTV 154
GE A +F +L TW M+ + + EAL +F M + + + TF V
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD------ 208
+ AC +S+ G Q+H L K GF + + L+++Y KCG+ RK+FD
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 209 --------GLLRQ---------------RDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
GL+ R+++SW MI AY + +EA LF +MQ
Sbjct: 186 VSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD 245
Query: 246 GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY--ACLVDLCGRAGRL 303
+ N+ T V LL A + G + G D KN + D + L+D+ + G L
Sbjct: 246 DVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVL---DCFLGTALIDMYSKCGSL 302
Query: 304 KEAFYIIEGLGVKLSLSVWGPLLAGCNVHG 333
++A + + + K SL+ W ++ VHG
Sbjct: 303 QDARKVFDVMQGK-SLATWNSMITSLGVHG 331
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 161/280 (57%), Gaps = 8/280 (2%)
Query: 54 NAMITGYAQNRRLDEALELFERMP-ERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDV 112
++++ YA+N+ +++AL L + + N + + + G+ + + KL + L Q D
Sbjct: 451 SSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDT 510
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKM-QANGGLKPNNGTFVTVLGACSGLASLTEGQQIH 171
++W + ++ EE +++F M Q+N ++P+ TFV++L CS L LT G IH
Sbjct: 511 VSWNIAIAACSRSDYHEEVIELFKHMLQSN--IRPDKYTFVSILSLCSKLCDLTLGSSIH 568
Query: 172 QLISKTGFQ-ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHG 230
LI+KT F +T V + LI+MY KCG + K+F++ R+++LI+W +I+ HG
Sbjct: 569 GLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEET--REKNLITWTALISCLGIHG 626
Query: 231 YGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
YG EA+ F + LGF+ + V+++ +LTAC H G+V EG+ F K +K+ ++ + DHY
Sbjct: 627 YGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQK-MKDYGVEPEMDHY 685
Query: 291 ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCN 330
C VDL R G LKEA ++I + VW L GCN
Sbjct: 686 RCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 12/326 (3%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLD-- 67
F+QM ER+ S+ T++ G +K G +D A +F M + + ++G LD
Sbjct: 71 VFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVR 130
Query: 68 -----EALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
L L + D +L + + L AE++F ++P K + TW MM+
Sbjct: 131 AGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLL 190
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
G +E + F ++ G +F+ VL S + L +Q+H +K G
Sbjct: 191 GHRGFLKECMFFFREL-VRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCE 249
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
VV++LI+ Y KCG H+A ++F D D++SWN +I A A +A+ LF M
Sbjct: 250 ISVVNSLISAYGKCGNTHMAERMFQDA--GSWDIVSWNAIICATAKSENPLKALKLFVSM 307
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
E GF N TYV +L S L+ G Q L+KN + L+D + G
Sbjct: 308 PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDFYAKCGN 366
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAG 328
L+++ + + K ++ W LL+G
Sbjct: 367 LEDSRLCFDYIRDK-NIVCWNALLSG 391
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 138/265 (52%), Gaps = 22/265 (8%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMIT---------GY 60
F M + + +W M+ L G + + F R +V A +T G
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFF-----RELVRMGASLTESSFLGVLKGV 225
Query: 61 AQNRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWT 116
+ + LD + +L ++ +++ N++++ + + G + AE++F + D+++W
Sbjct: 226 SCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 117 SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK 176
+++ A+ +ALK+F M +G PN GT+V+VLG S + L+ G+QIH ++ K
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHG-FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 344
Query: 177 TGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAI 236
G + + +ALI+ Y+KCG L +R FD +R ++++ WN +++ YA+ G +
Sbjct: 345 NGCETGIVLGNALIDFYAKCGNLEDSRLCFD--YIRDKNIVCWNALLSGYANKD-GPICL 401
Query: 237 NLFNKMQELGFQANDVTYVELLTAC 261
+LF +M ++GF+ + T+ L +C
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 180/445 (40%), Gaps = 87/445 (19%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
++S +++ K G A +F ++VSWNA+I A++ +AL+LF MP
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 78 ERDMAS---------------------------------------WNAMLTGFFQNGELN 98
E + NA++ + + G L
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 99 RAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC 158
+ F + K+++ W ++++GYA L +F +M G +P TF T L +C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQM-LQMGFRPTEYTFSTALKSC 426
Query: 159 SGLASLTEGQQIHQLISKTGFQENTRVVSALIN--------------------------- 191
+TE QQ+H +I + G+++N V+S+L+
Sbjct: 427 C----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL 482
Query: 192 -----MYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELG 246
+YS+ G+ H + K+ L Q D +SWN IAA + Y E I LF M +
Sbjct: 483 NIVAGIYSRRGQYHESVKLIST--LEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN 540
Query: 247 FQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC--LVDLCGRAGRLK 304
+ + T+V +L+ CS L D + L ++ D + C L+D+ G+ G ++
Sbjct: 541 IRPDKYTFVSILSLCSK--LCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 598
Query: 305 EAFYIIEGLGVKLSLSVWGPLLAGCNVHGNAD--IGKLVAKKILKVEHENAGTYSLLSNM 362
+ E K +L W L++ +HG + K L + + S+L+
Sbjct: 599 SVMKVFEETREK-NLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTAC 657
Query: 363 YASVGKWKEAANVRMKMKDKGLKKQ 387
G KE + KMKD G++ +
Sbjct: 658 RHG-GMVKEGMGLFQKMKDYGVEPE 681
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 104/179 (58%), Gaps = 6/179 (3%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N +++ + + GE++ A K+F ++P+++ +++ +++ GY+++G ++A +F++M+ G L
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTG-FQENTRVVSALINMYSKCGELHIAR 203
PN T V+ L +C+ L + G Q+H L K G F + V + L+ +Y + L +A
Sbjct: 113 -PNQST-VSGLLSCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAE 169
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
++F+D + + L +WN M++ H G+ E + F ++ +G + +++ +L S
Sbjct: 170 QVFED--MPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK--TGFQENTRVVSALINMYSKCGEL 199
G L +N V++L C S + +H L + + V + +I++Y K GE+
Sbjct: 6 GDLANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEV 65
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
+A K+FD + +R+ +S+N +I Y+ +G ++A +F++M+ G+ N T LL+
Sbjct: 66 SLAGKVFDQ--MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS 123
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSL 319
S V G Q LK CL+ L GR L+ A + E + K SL
Sbjct: 124 CASLD--VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK-SL 180
Query: 320 SVWGPLLA 327
W +++
Sbjct: 181 ETWNHMMS 188
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 214/423 (50%), Gaps = 50/423 (11%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ---- 62
F++M ERD SW +++ ++ +A L DRM L ++V+WN + G +
Sbjct: 242 FDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNY 301
Query: 63 -------------NRRLDEAL-----------------ELFERMPERDMA-------SWN 85
N R+ ++F + R + N
Sbjct: 302 IGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN 361
Query: 86 AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
+++T + + +L A +F ++ + TW S+++G+A + SEE + +M +G
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG-FH 420
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIH-QLISKTGFQENTRVVSALINMYSKCGELHIARK 204
PN+ T ++L + + +L G++ H ++ + +++ + ++L++MY+K GE+ A++
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+FD +R+RD +++ +I Y G G A+ F M G + + VT V +L+ACSH+
Sbjct: 481 VFDS--MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
LV EG F K+ I+++ +HY+C+VDL RAG L +A I + + S ++
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 325 LLAGCNVHGNADIGKLVAKK-ILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 383
LL C +HGN +IG+ A K +L+ + E+ G Y LL++MYA G W + V+ + D G
Sbjct: 599 LLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLG 658
Query: 384 LKK 386
++K
Sbjct: 659 VQK 661
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 9/271 (3%)
Query: 49 NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAEL- 107
N+ NA+I+ Y + ++D A LF+RM ERD SWNA++ + +L A KL +
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 108 ---PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
+ ++TW ++ G + G AL M+ N ++ + + L ACS + +L
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR-NCNVRIGSVAMINGLKACSHIGAL 336
Query: 165 TEGQQIHQLISKT-GFQENT-RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
G+ H L+ ++ F + V ++LI MYS+C +L A +F + L +WN +
Sbjct: 337 KWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQ--VEANSLSTWNSI 394
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
I+ +A++ E L +M GF N +T +L + G + G ++ +L+ +S
Sbjct: 395 ISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQS 454
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGL 313
+ + LVD+ ++G + A + + +
Sbjct: 455 YKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 134/292 (45%), Gaps = 41/292 (14%)
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
+ W ++ Y ++ +E++ ++ +M + G ++ + T+ +V+ AC+ L G+ +H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKG-IRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
I + + N V +ALI+MY + G++ +AR++FD + +RD +SWN +I Y
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKL 266
Query: 233 NEAINLFNKMQELGFQANDVTY-----------------------------------VEL 257
EA L ++M G +A+ VT+ +
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 258 LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA-CLVDLCGRAGRLKEAFYIIEGLGVK 316
L ACSH G + G + ++++ S D+ L+ + R L+ AF + + +
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 317 LSLSVWGPLLAGCNVHGNADIGKLVAKK-ILKVEHENAGTYSLLSNMYASVG 367
SLS W +++G + ++ + K+ +L H N T + + ++A VG
Sbjct: 387 -SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 5 RGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGY 60
R + F Q++ +S+W +++ G A + R ++ L M L N ++ +++ +
Sbjct: 374 RHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLF 433
Query: 61 AQNRRLDEALE----LFERMPERD-MASWNAMLTGFFQNGELNRAEKLFAELPQKDVITW 115
A+ L E + R +D + WN+++ + ++GE+ A+++F + ++D +T+
Sbjct: 434 ARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTY 493
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
TS++ GY + G E AL F M G+KP++ T V VL ACS + EG H L +
Sbjct: 494 TSLIDGYGRLGKGEVALAWFKDMD-RSGIKPDHVTMVAVLSACSHSNLVREG---HWLFT 549
Query: 176 KT----GFQENTRVVSALINMYSKCGELHIARKIF 206
K G + S ++++Y + G L AR IF
Sbjct: 550 KMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 55/260 (21%)
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFV-----TVLGACSGLASLTEGQQIHQLISKTG 178
HG EA + F+ ++ G + FV ++L C G GQQ+H +G
Sbjct: 58 SHGQLYEAFRTFSLLRYQSG----SHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSG 113
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
+ ++ +V L+ YS L A+ I ++ + + WN +I +Y + E++++
Sbjct: 114 LEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP--LPWNVLIGSYIRNKRFQESVSV 171
Query: 239 FNKMQELGFQANDVTYVELLTAC-------------------SHA--------------- 264
+ +M G +A++ TY ++ AC SH
Sbjct: 172 YKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKR 231
Query: 265 -GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLSLS 320
G VD + FD++ + ++ + +++ +L EAF +++ + GV+ S+
Sbjct: 232 FGKVDVARRLFDRMSERDAVS-----WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIV 286
Query: 321 VWGPLLAGCNVHGNADIGKL 340
W + GC GN IG L
Sbjct: 287 TWNTIAGGCLEAGNY-IGAL 305
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 214/423 (50%), Gaps = 50/423 (11%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ---- 62
F++M ERD SW +++ ++ +A L DRM L ++V+WN + G +
Sbjct: 242 FDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNY 301
Query: 63 -------------NRRLDEAL-----------------ELFERMPERDMA-------SWN 85
N R+ ++F + R + N
Sbjct: 302 IGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN 361
Query: 86 AMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLK 145
+++T + + +L A +F ++ + TW S+++G+A + SEE + +M +G
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG-FH 420
Query: 146 PNNGTFVTVLGACSGLASLTEGQQIH-QLISKTGFQENTRVVSALINMYSKCGELHIARK 204
PN+ T ++L + + +L G++ H ++ + +++ + ++L++MY+K GE+ A++
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+FD +R+RD +++ +I Y G G A+ F M G + + VT V +L+ACSH+
Sbjct: 481 VFDS--MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
LV EG F K+ I+++ +HY+C+VDL RAG L +A I + + S ++
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 325 LLAGCNVHGNADIGKLVAKK-ILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 383
LL C +HGN +IG+ A K +L+ + E+ G Y LL++MYA G W + V+ + D G
Sbjct: 599 LLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLG 658
Query: 384 LKK 386
++K
Sbjct: 659 VQK 661
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 9/271 (3%)
Query: 49 NVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAEL- 107
N+ NA+I+ Y + ++D A LF+RM ERD SWNA++ + +L A KL +
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 108 ---PQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
+ ++TW ++ G + G AL M+ N ++ + + L ACS + +L
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR-NCNVRIGSVAMINGLKACSHIGAL 336
Query: 165 TEGQQIHQLISKT-GFQENT-RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
G+ H L+ ++ F + V ++LI MYS+C +L A +F + L +WN +
Sbjct: 337 KWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQ--VEANSLSTWNSI 394
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
I+ +A++ E L +M GF N +T +L + G + G ++ +L+ +S
Sbjct: 395 ISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQS 454
Query: 283 IQVKEDHYACLVDLCGRAGRLKEAFYIIEGL 313
+ + LVD+ ++G + A + + +
Sbjct: 455 YKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 134/292 (45%), Gaps = 41/292 (14%)
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
+ W ++ Y ++ +E++ ++ +M + G ++ + T+ +V+ AC+ L G+ +H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKG-IRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
I + + N V +ALI+MY + G++ +AR++FD + +RD +SWN +I Y
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDR--MSERDAVSWNAIINCYTSEEKL 266
Query: 233 NEAINLFNKMQELGFQANDVTY-----------------------------------VEL 257
EA L ++M G +A+ VT+ +
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 258 LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA-CLVDLCGRAGRLKEAFYIIEGLGVK 316
L ACSH G + G + ++++ S D+ L+ + R L+ AF + + +
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 317 LSLSVWGPLLAGCNVHGNADIGKLVAKK-ILKVEHENAGTYSLLSNMYASVG 367
SLS W +++G + ++ + K+ +L H N T + + ++A VG
Sbjct: 387 -SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 5 RGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGY 60
R + F Q++ +S+W +++ G A + R ++ L M L N ++ +++ +
Sbjct: 374 RHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLF 433
Query: 61 AQNRRLDEALE----LFERMPERD-MASWNAMLTGFFQNGELNRAEKLFAELPQKDVITW 115
A+ L E + R +D + WN+++ + ++GE+ A+++F + ++D +T+
Sbjct: 434 ARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTY 493
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
TS++ GY + G E AL F M G+KP++ T V VL ACS + EG H L +
Sbjct: 494 TSLIDGYGRLGKGEVALAWFKDMD-RSGIKPDHVTMVAVLSACSHSNLVREG---HWLFT 549
Query: 176 KT----GFQENTRVVSALINMYSKCGELHIARKIF 206
K G + S ++++Y + G L AR IF
Sbjct: 550 KMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 55/260 (21%)
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFV-----TVLGACSGLASLTEGQQIHQLISKTG 178
HG EA + F+ ++ G + FV ++L C G GQQ+H +G
Sbjct: 58 SHGQLYEAFRTFSLLRYQSG----SHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSG 113
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
+ ++ +V L+ YS L A+ I ++ + + WN +I +Y + E++++
Sbjct: 114 LEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP--LPWNVLIGSYIRNKRFQESVSV 171
Query: 239 FNKMQELGFQANDVTYVELLTAC-------------------SHA--------------- 264
+ +M G +A++ TY ++ AC SH
Sbjct: 172 YKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKR 231
Query: 265 -GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLSLS 320
G VD + FD++ + ++ + +++ +L EAF +++ + GV+ S+
Sbjct: 232 FGKVDVARRLFDRMSERDAVS-----WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIV 286
Query: 321 VWGPLLAGCNVHGNADIGKL 340
W + GC GN IG L
Sbjct: 287 TWNTIAGGCLEAGNY-IGAL 305
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 211/454 (46%), Gaps = 45/454 (9%)
Query: 1 MWEDRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGY 60
W+ + + M +D ++T M+ G +D A +F + +N +++NA++ G+
Sbjct: 333 FWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGF 392
Query: 61 AQNRRLDEALELFERMPERDMASWNAMLT-------------------GF---------- 91
+N +AL+LF M +R + + LT GF
Sbjct: 393 CRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNP 452
Query: 92 -FQNGELNR---------AEKLFAELPQK--DVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
Q L+ AE++F + P TS++ GYA++GL ++A+ +F +
Sbjct: 453 CIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTL 512
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
L + + +L C L G QIH K G+ + + ++LI+MY+KC +
Sbjct: 513 CEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDS 572
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
A KIF+ +R+ D+ISWN +I+ Y G+EA+ L+++M E + + +T +++
Sbjct: 573 DDAIKIFNT--MREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVIS 630
Query: 260 AC--SHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKL 317
A + + + F + I+ +HY V + G G L+EA I + V+
Sbjct: 631 AFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQP 690
Query: 318 SLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRM 377
+SV LL C +H N + K VAK IL + E Y L SN+Y++ G W + +R
Sbjct: 691 EVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIRE 750
Query: 378 KMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQ 411
+M+++G +K P SWI N + F D SH Q
Sbjct: 751 EMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQ 784
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 125/219 (57%), Gaps = 16/219 (7%)
Query: 73 FERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEAL 132
F ++ E NA+++ + + G A +F L V+++T++++G+++ L EAL
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 133 KMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINM 192
K+F +M+ G ++PN TFV +L AC ++ + G QIH LI K+GF + V ++L+++
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 193 YSK-----CGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL-G 246
Y K C ++ K+FD+ + QRD+ SWN ++++ G ++A +LF +M + G
Sbjct: 226 YDKDSGSSCDDV---LKLFDE--IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEG 280
Query: 247 FQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
F + T LL++C+ + ++ G + L R+I++
Sbjct: 281 FGVDSFTLSTLLSSCTDSSVLLRG-----RELHGRAIRI 314
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 153/350 (43%), Gaps = 50/350 (14%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
+F +++E ++ K G +A +F + VVS+ A+I+G+++ EA
Sbjct: 105 SFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEA 164
Query: 70 LELFERMPERDMASWN-----AMLTG----------------FFQNGELNRAE------- 101
L++F RM + + N A+LT ++G LN
Sbjct: 165 LKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMS 224
Query: 102 --------------KLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPN 147
KLF E+PQ+DV +W ++++ + G S +A +F +M G +
Sbjct: 225 LYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVD 284
Query: 148 NGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD 207
+ T T+L +C+ + L G+++H + G + V +ALI YSK ++ +++
Sbjct: 285 SFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYE 344
Query: 208 DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
++ +D +++ MI AY G + A+ +F + E N +TY L+ G
Sbjct: 345 --MMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE----KNTITYNALMAGFCRNGHG 398
Query: 268 DEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKL 317
+ ++ F +L+ R +++ + VD CG K+ I G +K
Sbjct: 399 LKALKLFTDMLQ-RGVELTDFSLTSAVDACGLVSE-KKVSEQIHGFCIKF 446
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 164/336 (48%), Gaps = 44/336 (13%)
Query: 10 AFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEA 69
F+Q + +D+ SWT+ + G A SG +AR LFD MP RN+VSWNAM+ GY DEA
Sbjct: 320 VFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEA 379
Query: 70 LELFERMPER---------------------------------------DMASWNAMLTG 90
L+ M + ++ NA+L
Sbjct: 380 LDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDM 439
Query: 91 FFQNGELNRAEKLFAELPQ-KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
+ + G L A F ++ + +D ++W +++TG A+ G SE+AL F MQ KP+
Sbjct: 440 YGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA--KPSKY 497
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
T T+L C+ + +L G+ IH + + G++ + + A+++MYSKC A ++F +
Sbjct: 498 TLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEA 557
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
RDLI WN +I +G E LF ++ G + + VT++ +L AC G V+
Sbjct: 558 A--TRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVEL 615
Query: 270 GIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKE 305
G QYF + I + +HY C+++L + G L +
Sbjct: 616 GFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQ 651
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 129/288 (44%), Gaps = 46/288 (15%)
Query: 26 VDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWN 85
++ K G +DDAR LF+ MP R+ SWNA+IT AQN DE +F RM + +
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 86 AMLTGFFQNGEL---------------------------------------NRAEKLFAE 106
G ++ L + A ++F E
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 107 LPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTE 166
+ ++W ++ Y + G ++EA+ MF KM ++P N T +V+ ACS +L
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKM-LELNVRPLNHTVSSVMLACSRSLALEV 281
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAY 226
G+ IH + K +T V +++ +MY KC L AR++FD R +DL SW ++ Y
Sbjct: 282 GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQT--RSKDLKSWTSAMSGY 339
Query: 227 AHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYF 274
A G EA LF+ M E N V++ +L HA DE + +
Sbjct: 340 AMSGLTREARELFDLMPE----RNIVSWNAMLGGYVHAHEWDEALDFL 383
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 36/312 (11%)
Query: 60 YAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMM 119
Y + RL+ A +F++ +D+ SW + ++G+ +G A +LF +P++++++W +M+
Sbjct: 308 YVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAML 367
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
GY +EAL T M+ +N T V +L CSG++ + G+Q H I + G+
Sbjct: 368 GGYVHAHEWDEALDFLTLMRQEIE-NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGY 426
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
N V +AL++MY KCG L A I+ + RD +SWN ++ A G +A++ F
Sbjct: 427 DTNVIVANALLDMYGKCGTLQSA-NIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF 485
Query: 240 NKMQELGFQANDVTYVELLTACS-----------HAGLVDEGIQY--------FDKLLKN 280
MQ + + + T LL C+ H L+ +G + D K
Sbjct: 486 EGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKC 544
Query: 281 R----SIQVKEDH-------YACLVDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLL 326
R +I+V ++ + ++ C R GR KE F ++E GVK + +L
Sbjct: 545 RCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGIL 604
Query: 327 AGCNVHGNADIG 338
C G+ ++G
Sbjct: 605 QACIREGHVELG 616
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 118/210 (56%), Gaps = 5/210 (2%)
Query: 61 AQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMT 120
Q R++ L F +P + N + + + G ++ A +LF E+P++D +W +++T
Sbjct: 78 VQARKVQSHLVTFSPLPP--IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVIT 135
Query: 121 GYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQ 180
AQ+G+S+E +MF +M + G++ +F VL +C + L +Q+H + K G+
Sbjct: 136 ACAQNGVSDEVFRMFRRMNRD-GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYS 194
Query: 181 ENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFN 240
N + ++++++Y KC + AR++FD+ ++ D +SWN ++ Y G+ +EA+ +F
Sbjct: 195 GNVDLETSIVDVYGKCRVMSDARRVFDE-IVNPSD-VSWNVIVRRYLEMGFNDEAVVMFF 252
Query: 241 KMQELGFQANDVTYVELLTACSHAGLVDEG 270
KM EL + + T ++ ACS + ++ G
Sbjct: 253 KMLELNVRPLNHTVSSVMLACSRSLALEVG 282
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 204/423 (48%), Gaps = 48/423 (11%)
Query: 22 WTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPE--- 78
W +++D + G D A ++F M R+VVSWN +I + + + AL+ F M E
Sbjct: 172 WNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEI 231
Query: 79 -----------------RDMASWNAMLT-----GFFQNG--------------ELNRAEK 102
R+++ L GF N L+ + K
Sbjct: 232 QPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVK 291
Query: 103 LFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
LF EL + D + SM+ Y+ H E+AL++F + ++P+ TF +VL + + +
Sbjct: 292 LFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFI-LAMTQSVRPDKFTFSSVLSSMNAVM 350
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF--DDGLLRQRDLISWN 220
L G +H L+ K GF +T V ++L+ MY K G + +A +F DG +DLI WN
Sbjct: 351 -LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDG----KDLIFWN 405
Query: 221 GMIAAYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLK 279
+I A + E++ +FN++ + + VT + +L AC +AG V+EGIQ F + K
Sbjct: 406 TVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEK 465
Query: 280 NRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGK 339
+ +HYAC+++L R G + EA I + + + S +W P+L G+ + +
Sbjct: 466 AHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAE 525
Query: 340 LVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTV 399
VAK +L+ E +++ Y +L +Y +W+ + +R M + LK G S I + ++V
Sbjct: 526 TVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSV 585
Query: 400 QVF 402
F
Sbjct: 586 FSF 588
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 70/316 (22%)
Query: 31 KSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMASWNAMLTG 90
KSG + +A LFD +P +N ++WN + G +N L+ AL+LF+ MPERD+ SWN M++G
Sbjct: 51 KSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISG 110
Query: 91 -------------FF--QNGELNRAEKLFAEL----------------------PQKDVI 113
FF Q E+ E F+ L + +++
Sbjct: 111 LVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLV 170
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQ--------------ANGG---------------- 143
W S+M Y + G+ + AL +F M+ ++ G
Sbjct: 171 VWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREME 230
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR 203
++P+ T V+ CS L L++G+Q L K GF N+ V+ A I+M+SKC L +
Sbjct: 231 IQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSV 290
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
K+F + L + D + N MI +Y+ H G +A+ LF + + T+ +L++ +
Sbjct: 291 KLFRE--LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MN 347
Query: 264 AGLVDEGIQYFDKLLK 279
A ++D G ++K
Sbjct: 348 AVMLDHGADVHSLVIK 363
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 120/220 (54%), Gaps = 7/220 (3%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N + Y ++ + AL+LF+ +P+++ +WN L G F+NG LN A LF E+P++DV+
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVV 102
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
+W +M++G G E +++F MQ ++P TF ++L S + + G+QIH
Sbjct: 103 SWNTMISGLVSCGFHEYGIRVFFDMQ-RWEIRPTEFTF-SILA--SLVTCVRHGEQIHGN 158
Query: 174 ISKTGFQENTRVV-SALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
+G VV +++++MY + G A +F + RD++SWN +I + + G
Sbjct: 159 AICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVF--LTMEDRDVVSWNCLILSCSDSGNK 216
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ 272
A++ F M+E+ Q ++ T +++ CS + +G Q
Sbjct: 217 EVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGM 222
S T + +H + + GF T + + +Y K G + A ++FDD + ++ I+WN
Sbjct: 19 SPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDD--IPDKNTITWNVC 76
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ-YFDKLLKNR 281
+ +GY N A++LF++M E + V++ +++ G + GI+ +FD ++
Sbjct: 77 LKGLFKNGYLNNALDLFDEMPE----RDVVSWNTMISGLVSCGFHEYGIRVFFD--MQRW 130
Query: 282 SIQVKEDHYACLVDL--CGRAGRLKEAFYIIEGLGVKLSLSVWGPLL 326
I+ E ++ L L C R G I G+ + +L VW ++
Sbjct: 131 EIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVS-RYNLVVWNSVM 176
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 184/365 (50%), Gaps = 44/365 (12%)
Query: 9 MAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDE 68
MA ++ + ++ + G + AR +FD MP +N V+W AMI GY + DE
Sbjct: 107 MALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDE 166
Query: 69 ALELFE-----------------------RMPERDMASW----------------NAMLT 89
A LFE R E ++ ++++
Sbjct: 167 AFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVY 226
Query: 90 GFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
+ Q GEL A + F + +KDVI+WT++++ ++ G +A+ MF M N PN
Sbjct: 227 FYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGM-LNHWFLPNEF 285
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
T ++L ACS +L G+Q+H L+ K + + V ++L++MY+KCGE+ RK+FD
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDG- 344
Query: 210 LLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
+ R+ ++W +IAA+A G+G EAI+LF M+ AN++T V +L AC G +
Sbjct: 345 -MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 270 GIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGC 329
G + +++KN SI+ + LV L + G ++AF +++ L + +S W +++GC
Sbjct: 404 GKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS-WTAMISGC 461
Query: 330 NVHGN 334
+ G+
Sbjct: 462 SSLGH 466
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 43/304 (14%)
Query: 8 TMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLD 67
++ +M + DV T+++D AK G I D R +FD M RN V+W ++I +A+ +
Sbjct: 308 SLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGE 367
Query: 68 EALELFERMPERDMASWN--------------AMLTG----------------------- 90
EA+ LF M R + + N A+L G
Sbjct: 368 EAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLV 427
Query: 91 --FFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
+ + GE A + +LP +DV++WT+M++G + G EAL F K G++PN
Sbjct: 428 WLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD-FLKEMIQEGVEPNP 486
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD 208
T+ + L AC+ SL G+ IH + K N V SALI+MY+KCG + A ++FD
Sbjct: 487 FTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDS 546
Query: 209 GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVD 268
+ +++L+SW MI YA +G+ EA+ L +M+ GF+ +D + +L+ C L D
Sbjct: 547 --MPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIEL-D 603
Query: 269 EGIQ 272
E ++
Sbjct: 604 EAVE 607
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 151/289 (52%), Gaps = 16/289 (5%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGL 144
N +++ + G+L A K+F +P+K+ +TWT+M+ GY ++GL +EA +F +G
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 145 KPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARK 204
N FV +L CS A G+Q+H + K G N V S+L+ Y++CGEL A +
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALR 239
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
FD ++ ++D+ISW +I+A + G+G +AI +F M F N+ T +L ACS
Sbjct: 240 AFD--MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEE 297
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHY--ACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVW 322
+ G Q ++K +K D + L+D+ + G + + + +G+ + +++ W
Sbjct: 298 KALRFGRQVHSLVVKR---MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVT-W 353
Query: 323 GPLLAGCNVHGNADIGK--LVAKKILKVEHENAGTYSLLSNMYA--SVG 367
++A H G+ + +I+K H A +++S + A SVG
Sbjct: 354 TSIIAA---HAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 69/195 (35%), Gaps = 71/195 (36%)
Query: 3 EDRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM----------------- 45
E R Q+ RDV SWT M+ G + G +A M
Sbjct: 435 ESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALK 494
Query: 46 ----------------------PLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMAS 83
L NV +A+I YA+ + EA +F+ MPE+++ S
Sbjct: 495 ACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVS 554
Query: 84 WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGG 143
W AM+ G YA++G EALK+ +M+A G
Sbjct: 555 WKAMIMG-------------------------------YARNGFCREALKLMYRMEAE-G 582
Query: 144 LKPNNGTFVTVLGAC 158
+ ++ F T+L C
Sbjct: 583 FEVDDYIFATILSTC 597
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 195/403 (48%), Gaps = 14/403 (3%)
Query: 6 GCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGYA 61
G +FN + E+DV SW ++V A G + D+ LF +M ++ + + + +
Sbjct: 267 GSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCS 326
Query: 62 QNRRLDEALELFERMPER--DMASWNAMLTGFFQNGELNRAEK---LFAELPQKDVITWT 116
+N + ++ + + D++S + G+ N E L+ LP ++
Sbjct: 327 RNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCN 386
Query: 117 SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACS-GLA-SLTEGQQIHQLI 174
S+MT G++++ ++MF M + G + T TVL A S L SL +H
Sbjct: 387 SLMTSLMHCGITKDIIEMFGLM-IDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCA 445
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNE 234
K+G+ + V +LI+ Y+K G+ ++RK+FD+ L ++ +I YA +G G +
Sbjct: 446 IKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDE--LDTPNIFCLTSIINGYARNGMGTD 503
Query: 235 AINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLV 294
+ + +M + ++VT + +L+ CSH+GLV+EG FD L I YAC+V
Sbjct: 504 CVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMV 563
Query: 295 DLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAG 354
DL GRAG +++A ++ W LL C +H N IG+ A+ ++ +E EN
Sbjct: 564 DLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFA 623
Query: 355 TYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGN 397
Y +S Y +G ++ + +R + L ++ G S + V N
Sbjct: 624 VYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 114/224 (50%), Gaps = 4/224 (1%)
Query: 57 ITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWT 116
+T + R+D + E P + + N + ++G L A + F E+ +DV+T+
Sbjct: 23 LTPFIATPRMDFS-SFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYN 81
Query: 117 SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK 176
+++G +++G S A++++ +M + GL+ + TF +VL CS EG Q+H +
Sbjct: 82 LLISGNSRYGCSLRAIELYAEM-VSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVIS 140
Query: 177 TGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAI 236
GF N V SAL+ +Y+ + +A K+FD+ L R+L N ++ + G
Sbjct: 141 LGFGCNMFVRSALVGLYACLRLVDVALKLFDEML--DRNLAVCNLLLRCFCQTGESKRLF 198
Query: 237 NLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN 280
++ +M+ G N +TY ++ CSH LV EG Q ++K+
Sbjct: 199 EVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKS 242
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 135/262 (51%), Gaps = 13/262 (4%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGYAQNRRL 66
F++M +R+++ ++ ++G ++ RM L +N +++ MI G + +R +
Sbjct: 170 FDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLV 229
Query: 67 DEALELFERMPER-----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
E +L + + ++ N ++ + G+L+ + + F +P+KDVI+W S+++
Sbjct: 230 YEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSV 289
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
A +G ++L +F+KMQ G +P+ F++ L CS + + G+QIH + K GF
Sbjct: 290 CADYGSVLDSLDLFSKMQFWGK-RPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDV 348
Query: 182 NT-RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFN 240
++ V SALI+MY KC + + ++ L +L N ++ + H G + I +F
Sbjct: 349 SSLHVQSALIDMYGKCNGIENSALLYQS--LPCLNLECCNSLMTSLMHCGITKDIIEMFG 406
Query: 241 KMQELGFQANDVTYVELLTACS 262
M + G ++VT +L A S
Sbjct: 407 LMIDEGTGIDEVTLSTVLKALS 428
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 153/321 (47%), Gaps = 42/321 (13%)
Query: 25 MVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER----- 79
++D K G + R +F RN +SW A+++GYA N R D+AL M +
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 417
Query: 80 ----------------------------------DMASWNAMLTGFFQNGELNRAEKLFA 105
+++ +++ + + G +LF
Sbjct: 418 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD 477
Query: 106 ELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
L Q++V WT+M+ Y ++ +++F M + +P++ T VL CS L +L
Sbjct: 478 RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH-RPDSVTMGRVLTVCSDLKALK 536
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
G+++H I K F+ V + +I MY KCG+L A FD ++ ++W +I A
Sbjct: 537 LGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGS--LTWTAIIEA 594
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
Y + +AIN F +M GF N T+ +L+ CS AG VDE ++F+ +L+ ++Q
Sbjct: 595 YGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQP 654
Query: 286 KEDHYACLVDLCGRAGRLKEA 306
E+HY+ +++L R GR++EA
Sbjct: 655 SEEHYSLVIELLNRCGRVEEA 675
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 44/300 (14%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITG--YAQNRRLDEALELFERMPE-- 78
T +V G + DA+ +FD NV SWNA++ G + +R + L F M E
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELG 209
Query: 79 ------------RDMASWNAMLTG-------------------------FFQNGELNRAE 101
+ A +A+ G +F+ G++ A
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLAR 269
Query: 102 KLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGL 161
++F E+ ++D++ W +M+ G A + EAL +F M + + PN+ T+L +
Sbjct: 270 RVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDV 329
Query: 162 ASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWN 220
+L G+++H + K+ + E V S LI++Y KCG++ R++F +QR+ ISW
Sbjct: 330 KALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGS--KQRNAISWT 387
Query: 221 GMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN 280
+++ YA +G ++A+ MQ+ GF+ + VT +L C+ + +G + LKN
Sbjct: 388 ALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKN 447
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 122/245 (49%), Gaps = 7/245 (2%)
Query: 95 GELNRAEKLFAELPQKDVITWTSMMTGYAQHGLS--EEALKMFTKMQANGGLKPNNGTFV 152
G + A+K+F E +V +W +++ G G ++ L FT+M+ G+ N +
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMR-ELGVDLNVYSLS 218
Query: 153 TVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR 212
V + +G ++L +G + H L K G + + ++L++MY KCG++ +AR++FD+ +
Sbjct: 219 NVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE--IV 276
Query: 213 QRDLISWNGMIAAYAHHGYGNEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVDEGI 271
+RD++ W MIA AH+ EA+ LF M E N V +L + G
Sbjct: 277 ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK 336
Query: 272 QYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNV 331
+ +LK+++ + ++ L+DL + G + + G + ++S W L++G
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAIS-WTALMSGYAA 395
Query: 332 HGNAD 336
+G D
Sbjct: 396 NGRFD 400
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 19/215 (8%)
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
+A+ E AL + ++ G + N TF +L AC SL G+Q+H I G +
Sbjct: 86 FARQNNLEVALTILDYLEQRG-IPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLES 144
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG--NEAINLF 239
N + + L++MY+ CG + A+K+FD+ ++ SWN ++ G + ++ F
Sbjct: 145 NEFLRTKLVHMYTACGSVKDAQKVFDEST--SSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN---RSIQVKEDHYACLVDL 296
+M+ELG N + + + + A + +G++ +KN S+ +K LVD+
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTS----LVDM 258
Query: 297 ---CGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAG 328
CG+ G + F I V+ + VWG ++AG
Sbjct: 259 YFKCGKVGLARRVFDEI----VERDIVVWGAMIAG 289
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 124/231 (53%), Gaps = 7/231 (3%)
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
Q L ++A+++ K G P+ FV + +C+ L SL +++H ++ F+ +
Sbjct: 216 CQRRLYKDAIELLDK-----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGD 270
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
++ + +I+M+ +C + A+++FD + +D+ SW+ M+ AY+ +G G++A++LF +M
Sbjct: 271 PKLNNMVISMFGECSSITDAKRVFDH--MVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
+ G + N+ T++ + AC+ G ++E +FD + I K +HY ++ + G+ G
Sbjct: 329 TKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGH 388
Query: 303 LKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENA 353
L EA I L + + W + +HG+ D+ + + ++ V+ A
Sbjct: 389 LVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA 439
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 38/193 (19%)
Query: 54 NAMITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI 113
N +I+ + + + +A +F+ M ++DM SW+ M+
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMM------------------------- 309
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEG-QQIHQ 172
Y+ +G+ ++AL +F +M + GLKPN TF+TV AC+ + + E
Sbjct: 310 ------CAYSDNGMGDDALHLFEEMTKH-GLKPNEETFLTVFLACATVGGIEEAFLHFDS 362
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYG 232
+ ++ G T ++ + KCG L A + D L + W M HG
Sbjct: 363 MKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRD-LPFEPTADFWEAMRNYARLHG-- 419
Query: 233 NEAINLFNKMQEL 245
I+L + M+EL
Sbjct: 420 --DIDLEDYMEEL 430
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 175/362 (48%), Gaps = 35/362 (9%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
D ++T +++GL K+ ++DDA +F M + +V S+ +I G+++ + +A +F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 74 ERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
+ M E + +N +L GF ++GE+ +A++L E+ K + +T+ +++ GY +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G EA ++F +M+ G L P++ + T++ C L + I +K G +T
Sbjct: 711 GDLAEAFRLFDEMKLKG-LVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAP 768
Query: 186 VSALINMYSKCGELHIARKIFD-------DGLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
+ALIN K G+ + ++ + D + D +++N MI G A L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND-VTYNIMIDYLCKEGNLEAAKEL 827
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH--YACLVDL 296
F++MQ +TY LL G E FD+ + + ++ DH Y+ +++
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI---AAGIEPDHIMYSVIINA 884
Query: 297 CGRAGRLKEAFYIIEGL--------GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKV 348
+ G +A +++ + G KLS+S LL+G G ++ + V + ++++
Sbjct: 885 FLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Query: 349 EH 350
++
Sbjct: 945 QY 946
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 137/310 (44%), Gaps = 24/310 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
+V +TT++ ++ R DA + M + ++ +N++I G ++ +R+DEA
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 74 ERMPERDMA----SWNAMLTGFFQNGELNRAEKLFAE------LPQKDVITWTSMMTGYA 123
M E + ++ A ++G+ + E A+K E LP K + T ++ Y
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK--VLCTGLINEYC 568
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
+ G EA + M + G+ + T+ ++ + + ++I + + G +
Sbjct: 569 KKGKVIEACSAYRSM-VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 184 RVVSALINMYSKCGELHIARKIFDD----GLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
LIN +SK G + A IFD+ GL ++I +N ++ + G +A L
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGL--TPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGR 299
++M G N VTY ++ +G + E + FD+ +K + + Y LVD C R
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE-MKLKGLVPDSFVYTTLVDGCCR 744
Query: 300 AGRLKEAFYI 309
++ A I
Sbjct: 745 LNDVERAITI 754
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/453 (19%), Positives = 172/453 (37%), Gaps = 92/453 (20%)
Query: 21 SWTTMVDGLAKSGRIDDARALFDRMPLRNVV----SWNAMITGYAQNRRLDEALELFERM 76
++ ++DGL K R++DA++L M V +++ +I G + R D A L M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 77 --------------------PERDMASWNAMLTGFFQNGELNRAE--------------- 101
E M A+ G +G + +A+
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 102 ----KLFAELPQKDVI----TWTSMMTGYAQHGLSEEALKMFTKMQANG----------- 142
+L E+ +++++ T+ +++ G G + A + +M A+G
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 143 -----------------------GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
G+ P+ + +++ S + E + + + G
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDD----GLLRQRDLISWNGMIAAYAHHGYGNEA 235
+ N A I+ Y + E A K + G+L + L + G+I Y G EA
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT--GLINEYCKKGKVIEA 576
Query: 236 INLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVD 295
+ + M + G + TY L+ VD+ + F + ++ + I Y L++
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE-MRGKGIAPDVFSYGVLIN 635
Query: 296 LCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIGK-LVAKKILKVEHE 351
+ G +++A I + + G+ ++ ++ LL G G + K L+ + +K H
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 352 NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
NA TY + + Y G EA + +MK KGL
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 206/437 (47%), Gaps = 30/437 (6%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALE 71
E D +++T+V+G GR+ +A AL DRM ++V+ + +I G R+ EAL
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 72 LFERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQKD----VITWTSMMTGYA 123
L +RM E D ++ +L ++G A LF ++ +++ V+ ++ ++
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
+ G ++AL +F +M+ G+K + T+ +++G +G ++ + + +
Sbjct: 257 KDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNK 241
SALI+++ K G+L A++++++ + R D I++N +I + +EA +F+
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC--GR 299
M G + + VTY L+ + A VD+G++ F ++ I + ++ C G+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 300 AGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE-NAGTYSL 358
KE F + GV S+ +G LL G +G + + +K+ K G Y++
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 359 LSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKSHSQSEMLEYL 418
+ + + K +A ++ + DKG+K + +G + S S+++M
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK-----KGSLSEADM---- 546
Query: 419 LLGLHTKMKKFGDILDD 435
L KMK+ G DD
Sbjct: 547 ---LFRKMKEDGCTPDD 560
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 185/392 (47%), Gaps = 25/392 (6%)
Query: 13 QMQER-DVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRR 65
+M++R D+ + +T+++GL GR+ +A L DRM P + V++ ++ ++
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP--DEVTYGPVLNRLCKSGN 225
Query: 66 LDEALELFERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTS 117
AL+LF +M ER++ + ++ ++ ++G + A LF E+ K DV+T++S
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT 177
++ G G ++ KM +M + P+ TF ++ L E ++++ +
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEA 235
G +T ++LI+ + K LH A ++FD + + + D+++++ +I +Y ++
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 236 INLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVD 295
+ LF ++ G N +TY L+ +G ++ + F +++ +R + Y L+D
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV-SRGVPPSVVTYGILLD 463
Query: 296 LCGRAGRLKEAFYIIEGLG---VKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKVEHE 351
G L +A I E + + L + ++ ++ G CN D L K
Sbjct: 464 GLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKP 523
Query: 352 NAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 383
+ TY+++ G EA + KMK+ G
Sbjct: 524 DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 62/311 (19%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLRN----VVSWNAMITGYAQ 62
FN+M+ + DV ++++++ GL G+ DD + M RN VV+++A+I + +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVIT 114
+L EA EL+ M R D ++N+++ GF + L+ A ++F + K D++T
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVT-VLGACSGLASLTEGQQIHQL 173
++ ++ Y + ++ +++F ++ + G L PN T+ T VLG C L +++ Q
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKG-LIPNTITYNTLVLGFCQS-GKLNAAKELFQE 445
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIF--------------------------- 206
+ G + L++ GEL+ A +IF
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 207 ------------DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTY 254
D G+ + D++++N MI G +EA LF KM+E G +D TY
Sbjct: 506 VDDAWSLFCSLSDKGV--KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 255 VELLTACSHAG 265
L+ A H G
Sbjct: 564 NILIRA--HLG 572
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 7/215 (3%)
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGL-LRQR-DLISWNGMIAAYAHHGYGN 233
K G++ +T S L+N + G + A + D + ++QR DL++ + +I G +
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 234 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACL 293
EA+ L ++M E GFQ ++VTY +L +G + F K ++ R+I+ Y+ +
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK-MEERNIKASVVQYSIV 251
Query: 294 VDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKVE 349
+D + G +A F +E G+K + + L+ G CN D K++ + I +
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 350 HENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+ T+S L +++ GK EA + +M +G+
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 172/341 (50%), Gaps = 26/341 (7%)
Query: 12 NQMQE----RDVSSWTTMVDGLAKSGRIDDARALFDRMP---LR-NVVSWNAMITGYAQN 63
NQM E DV +TT++D L K+G ++ A +LFD+M +R +VV + +++ G +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 64 RRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVITW 115
R +A L M +R D+ ++NA++ F + G+ AE+L+ E+ + ++ T+
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
TS++ G+ G +EA +MF M+ G P+ + +++ + + +I +S
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGN 233
+ G NT + LI + + G+ ++A+++F + R ++ ++N ++ ++G
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 234 EAINLFNKMQEL---GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
+A+ +F MQ+ G N TY LL + G +++ + F+ + K +
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 291 ACLVDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLLAG 328
+ +C +AG++K A F + GVK ++ + +++G
Sbjct: 465 IIIQGMC-KAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 136/283 (48%), Gaps = 30/283 (10%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFD---RMPL-RNVVSWNAMITGYAQNRRLDEALELF 73
DV ++ ++D K G+ DA L++ RM + N+ ++ ++I G+ +DEA ++F
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
M + D+ ++ +++ GF + +++ A K+F E+ QK + IT+T+++ G+ Q
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT---GFQEN 182
G A ++F+ M + G + PN T+ +L + + I + + K G N
Sbjct: 366 GKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQRDL--------ISWNGMIAAYAHHGYGNE 234
+ L++ G+L A +F+D +R+R++ I GM A G
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFED--MRKREMDIGIITYTIIIQGMCKA----GKVKN 478
Query: 235 AINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
A+NLF + G + N VTY +++ GL E F K+
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 158/356 (44%), Gaps = 23/356 (6%)
Query: 49 NVVSWNAMITGYAQNRRLDEALELFERMPE----RDMASWNAMLTGFFQNGELNRAEKLF 104
++V++ ++I G+ R++EA+ + +M E D+ + ++ +NG +N A LF
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 105 AELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSG 160
++ + DV+ +TS++ G G +A + M +KP+ TF ++ A
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK-IKPDVITFNALIDAFVK 259
Query: 161 LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQR----DL 216
+ ++++ + + N ++LIN + G + AR++F L+ + D+
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF--YLMETKGCFPDV 317
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+++ +I + ++A+ +F +M + G N +TY L+ G + + F
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL------GVKLSLSVWGPLLAGCN 330
++ +R + Y L+ G++K+A I E + GV ++ + LL G
Sbjct: 378 MV-SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 331 VHGNADIGKLVAKKILKVEHENAGTYSLLSNM-YASVGKWKEAANVRMKMKDKGLK 385
+G + +V + + K E + + GK K A N+ + KG+K
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 161/374 (43%), Gaps = 30/374 (8%)
Query: 32 SGRIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMP----ERDMAS 83
S + ++A LF M PL +++ + ++ A+ ++ D + L + + D+ +
Sbjct: 50 SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 84 WNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
N ++ F Q+ + A ++ + D++T+TS++ G+ EEA+ M +M
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM- 168
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
G+KP+ + T++ + + + + G + + + ++L+N G
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 200 HIARKIFDDGLLR-------QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDV 252
A D LLR + D+I++N +I A+ G +A L+N+M + N
Sbjct: 229 RDA-----DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283
Query: 253 TYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVD---LCGRAGRLKEAFYI 309
TY L+ G VDE Q F L++ + Y L++ C + + FY
Sbjct: 284 TYTSLINGFCMEGCVDEARQMF-YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 310 IEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKIL-KVEHENAGTYSLLSNMYASVGK 368
+ G+ + + L+ G G ++ + V ++ + N TY++L + GK
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 369 WKEAANVRMKMKDK 382
K+A + M+ +
Sbjct: 403 VKKALMIFEDMQKR 416
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 82/152 (53%), Gaps = 19/152 (12%)
Query: 10 AFNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLR-------NVVSWNAMIT 58
F+ M R ++ ++ ++ L +G++ A +F+ M R N+ ++N ++
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 59 GYAQNRRLDEALELFERMPERDM----ASWNAMLTGFFQNGELNRAEKLFAELPQK---- 110
G N +L++AL +FE M +R+M ++ ++ G + G++ A LF LP K
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 111 DVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
+V+T+T+M++G + GL EA +F KM+ +G
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 155/302 (51%), Gaps = 17/302 (5%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D ++ +++GL K GR+D A+ LF R+P +V +N +I G+ + RLD+A + M
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 78 ER-----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLS 128
D+ ++N+++ G+++ G + A ++ ++ K +V ++T ++ G+ + G
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
+EA + +M A+ GLKPN F ++ A + E +I + + + G + + ++
Sbjct: 441 DEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 189 LINMYSKCGELHIA----RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE 244
LI+ + E+ A R + +G++ + +++N +I A+ G EA L N+M
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVV--ANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 245 LGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLK 304
G +++TY L+ AG VD+ F+K+L++ + LC R+G ++
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC-RSGMVE 616
Query: 305 EA 306
EA
Sbjct: 617 EA 618
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 163/322 (50%), Gaps = 25/322 (7%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMP-----LRNVVSWNAMITGYAQNRR 65
F ++ + ++ + T++ G GR+DDA+A+ M + +V ++N++I GY +
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 66 LDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTS 117
+ ALE+ M + ++ S+ ++ GF + G+++ A + E+ + + + +
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ----IHQL 173
+++ + + EA+++F +M G KP+ TF +++ SGL + E + + +
Sbjct: 465 LISAFCKEHRIPEAVEIFREM-PRKGCKPDVYTFNSLI---SGLCEVDEIKHALWLLRDM 520
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL--ISWNGMIAAYAHHGY 231
IS+ G NT + LIN + + GE+ ARK+ ++ + + L I++N +I G
Sbjct: 521 ISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 232 GNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYA 291
++A +LF KM G ++++ L+ +G+V+E +++ +++ S +
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 292 CLVDLCGRAGRLKEAFYIIEGL 313
+ LC RAGR+++ + L
Sbjct: 640 LINGLC-RAGRIEDGLTMFRKL 660
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 137/282 (48%), Gaps = 22/282 (7%)
Query: 12 NQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGYAQNRRLD 67
N+ + +V S+T +VDG K G+ID+A + + M N V +N +I+ + + R+
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 68 EALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI----TWTSMM 119
EA+E+F MP + D+ ++N++++G + E+ A L ++ + V+ T+ +++
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
+ + G +EA K+ +M G + T+ +++ + + + + + + + G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGS-PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAIN 237
+ + LIN + G + A + + +LR D++++N +I G + +
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLV-------DEGIQ 272
+F K+Q G + VT+ L++ G V DEGI+
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE 697
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 26/258 (10%)
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR 203
+ P TF V+ A + + + + ++K G N+ + LI+ SKC ++ A
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 204 KIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTAC 261
++ ++ L D ++N +I NEA + N+M GF +D+TY L+
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 262 SHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL----GVKL 317
G VD F ++ K + + L+ GRL +A ++ + G+
Sbjct: 333 CKIGRVDAAKDLFYRIPKPEIVI-----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 318 SLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE--------NAGTYSLLSNMYASVGKW 369
+ + L+ G G + L+V H+ N +Y++L + + +GK
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLA-------LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 370 KEAANVRMKMKDKGLKKQ 387
EA NV +M GLK
Sbjct: 441 DEAYNVLNEMSADGLKPN 458
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 150/324 (46%), Gaps = 32/324 (9%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELF 73
DV ++T MVD K+G I+ AR F+ M NVV++ A+I Y + +++ A ELF
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLF------AELPQKD------------ 111
E M ++ +++A++ G + G++ +A ++F ++P D
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 112 --VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
V+T+ +++ G+ + EEA K+ M G +PN + ++ + L E Q+
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG-CEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ--RDLISWNGMIAAYA 227
+ +S+ GF S+LI+ Y K +A K+ L +++ + MI
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 228 HHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKE 287
G +EA L M+E G Q N VTY ++ G ++ ++ ++ + ++ +
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER-MGSKGVAPNY 814
Query: 288 DHYACLVDLCGRAGRLKEAFYIIE 311
Y L+D C + G L A ++E
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLE 838
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 175/419 (41%), Gaps = 66/419 (15%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELF 73
D +T ++ GL ++ ++A +RM L NVV+++ ++ G ++L +
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL 360
Query: 74 ERM------PERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHG- 126
M P + +N+++ + +G+ + A KL ++ + M GY +
Sbjct: 361 NMMMMEGCYPSPKI--FNSLVHAYCTSGDHSYAYKLLKKMVK------CGHMPGYVVYNI 412
Query: 127 ---------------LSEEALKMFTKMQANGGL--KPNNGTFVTVLGACSGLASLTEGQQ 169
L + A K +++M A G + K N +F L CS
Sbjct: 413 LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL--CSAGKYEKAFSV 470
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD----GLLRQRDLISWNGMIAA 225
I ++I + GF +T S ++N ++ +A +F++ GL+ D+ ++ M+ +
Sbjct: 471 IREMIGQ-GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA--DVYTYTIMVDS 527
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
+ G +A FN+M+E+G N VTY L+ A A V + F+ +L +
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP- 586
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIEGL-------------------GVKLSLSVWGPLL 326
Y+ L+D +AG++++A I E + + ++ +G LL
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646
Query: 327 AG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
G C H + KL+ ++ N Y L + VGK EA V+ +M + G
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 136/331 (41%), Gaps = 28/331 (8%)
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQHGLSEEALKMF 135
D ++++ +L ++ A LF E+ + DV T+T M+ + + GL E+A K F
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 136 TKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSK 195
+M+ G PN T+ ++ A ++ ++ + + G N SALI+ + K
Sbjct: 542 NEMR-EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 196 CGELHIARKIFD-----------DGLLRQRD-------LISWNGMIAAYAHHGYGNEAIN 237
G++ A +IF+ D +Q D ++++ ++ + EA
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
L + M G + N + Y L+ G +DE Q + Y+ L+D
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA-QEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 298 GRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKVEHENA 353
+ R A ++ + ++ ++ ++ G C V + KL+ K N
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
TY+ + + + +GK + + +M KG+
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
+V +T M+DGL K G+ D+A L M + NVV++ AMI G+ +++ LEL
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 74 ERMPERDMA----SWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGY 122
ERM + +A ++ ++ +NG L+ A L E+ Q W + GY
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH---WPTHTAGY 852
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 192/438 (43%), Gaps = 58/438 (13%)
Query: 11 FNQMQE----RDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ 62
F +M+E V ++ T++ GL K+G+I +A LF+ M + N +++N + +
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Query: 63 NRRLDEALELFERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQ---KDVITW 115
N + AL++ +M + D+ ++N ++ G +NG++ A F ++ + D +T
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTL 680
Query: 116 TSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLIS 175
+++ G + L E+A K+ T N +P N + ++G+ A + + +
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV 740
Query: 176 KTGF-QENTRVVSALINMYSKCGELHIARKIFDD-------------------GLLRQ-- 213
G ++ ++ +I K + AR +F+ GLL
Sbjct: 741 ANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADM 800
Query: 214 -----------------RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVE 256
D+ ++N ++ AY G +E L+ +M +AN +T+
Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNI 860
Query: 257 LLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL--- 313
+++ AG VD+ + + L+ +R Y L+D ++GRL EA + EG+
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 314 GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKV-EHENAGTYSLLSNMYASVGKWKEA 372
G + + +++ L+ G G AD + K+++K + TYS+L + VG+ E
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 373 ANVRMKMKDKGLKKQPGC 390
+ ++K+ GL C
Sbjct: 981 LHYFKELKESGLNPDVVC 998
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 159/335 (47%), Gaps = 23/335 (6%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEALE 71
+V ++T + L ++G+I++A + RM P +VV++ +I R+LD A E
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP--DVVTYTVLIDALCTARKLDCAKE 314
Query: 72 LFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYA 123
+FE+M + D ++ +L F N +L+ ++ ++E+ + DV+T+T ++
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
+ G EA M+ + G+ PN T+ T++ + L + ++ + G +
Sbjct: 375 KAGNFGEAFDTLDVMR-DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNK 241
I+ Y K G+ A + F+ + ++++ N + + A G EA +F
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAG 301
++++G + VTY ++ S G +DE I+ ++++N + L++ +A
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN-GCEPDVIVVNSLINTLYKAD 552
Query: 302 RLKEA---FYIIEGLGVKLSLSVWGPLLAGCNVHG 333
R+ EA F ++ + +K ++ + LLAG +G
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 587
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 129/264 (48%), Gaps = 17/264 (6%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALEL- 72
DV+++ ++D KSG+ID+ L+ M N ++ N +I+G + +D+AL+L
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 73 FERMPERDMA----SWNAMLTGFFQNGELNRAEKLFAEL----PQKDVITWTSMMTGYAQ 124
++ M +RD + ++ ++ G ++G L A++LF + + + + ++ G+ +
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 125 HGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTR 184
G ++ A +F +M G++P+ T+ ++ + + EG + + ++G +
Sbjct: 939 AGEADAACALFKRM-VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 185 VVSALINMYSKCGELHIARKIFDDGLLRQ---RDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ +IN K L A +F++ + DL ++N +I G EA ++N+
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 242 MQELGFQANDVTYVELLTACSHAG 265
+Q G + N T+ L+ S +G
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSG 1081
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 4 DRGCTMAFNQMQERDVS----SWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSW 53
D + ++ M +RD S ++ ++DGL+KSGR+ +A+ LF+ M P N +
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP--NCAIY 929
Query: 54 NAMITGYAQNRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQ 109
N +I G+ + D A LF+RM + D+ +++ ++ G ++ F EL +
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 110 ----KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
DV+ + ++ G + EEAL +F +M+ + G+ P+ T+ +++ +
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
E +I+ I + G + N +ALI YS G+ A ++
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 122/260 (46%), Gaps = 21/260 (8%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALF-----DRMPLRNVVSWNAMITGYAQNRRLDEAL 70
E + + ++ GL K+G +DDA L+ DR ++ +I G +++ RL EA
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 71 ELFERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGY 122
+LFE M + + A +N ++ GF + GE + A LF + ++ D+ T++ ++
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQI-HQLISKTGFQE 181
G +E L F +++ + GL P+ + ++ L E + +++ + G
Sbjct: 972 CMVGRVDEGLHYFKELKES-GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 182 NTRVVSALINMYSKCGELHIARKIFDD----GLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
+ ++LI G + A KI+++ GL + ++ ++N +I Y+ G A
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL--EPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 238 LFNKMQELGFQANDVTYVEL 257
++ M GF N TY +L
Sbjct: 1089 VYQTMVTGGFSPNTGTYEQL 1108
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 166/396 (41%), Gaps = 57/396 (14%)
Query: 10 AFNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYA 61
F+ MQ+R D +++ T+ L+ G + A +M + N S+N +I
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 62 QNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG 121
++R EA+E++ RM +L GF + + T++S+M G
Sbjct: 200 KSRFCTEAMEVYRRM----------ILEGF-----------------RPSLQTYSSLMVG 232
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
+ + + + +M+ G LKPN TF + + E +I + + G
Sbjct: 233 LGKRRDIDSVMGLLKEMETLG-LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 291
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLL--RQRDLISWNGMIAAYAHHGYGNEAINLF 239
+ + LI+ +L A+++F+ + D +++ ++ ++ + + +
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCG- 298
++M++ G + VT+ L+ A AG E D +++++ I Y L+ CG
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD-VMRDQGILPNLHTYNTLI--CGL 408
Query: 299 -RAGRLKEAFYI---IEGLGVKLSLSVWGPLL-----AGCNVHGNADIGKLVAKKILK-V 348
R RL +A + +E LGVK + + + +G +V K+ K I +
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 349 EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
NA YSL A G+ +EA + +KD GL
Sbjct: 469 VACNASLYSL-----AKAGRDREAKQIFYGLKDIGL 499
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 187/400 (46%), Gaps = 29/400 (7%)
Query: 10 AFNQMQE---RDVSSWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQ 62
F +M++ ++S++ ++D L ++G++D A L D M NV + N M+ +
Sbjct: 365 VFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDV----IT 114
+++LDEA +FE M + D ++ +++ G + G ++ A K++ ++ D I
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+TS++ + HG E+ K++ M N P+ T + +G+ + + I
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDM-INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIF----DDGLLRQRDLISWNGMIAAYAHHG 230
F + R S LI+ K G + ++F + G + D ++N +I + G
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL--DTRAYNIVIDGFCKCG 601
Query: 231 YGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
N+A L +M+ GF+ VTY ++ + +DE F++ K++ I++ Y
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSKRIELNVVIY 660
Query: 291 ACLVDLCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAGC--NVHGNADIGKLVAKKI 345
+ L+D G+ GR+ EA+ I+E L G+ +L W LL N + + K
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
LK N TY +L N V K+ +A +M+ +G+K
Sbjct: 721 LKCT-PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 55/321 (17%)
Query: 11 FNQMQE----RDVSSWTTMVDGLAKSGRIDDARALFDRMP---------LRNV------- 50
F QMQE V +TT++ G AK GR+D A +L D M L NV
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 51 -----------------------VSWNAMITGYAQNRRLDEALELFERMPERDMA----S 83
V++ +MI + RLDEA+E+FE + + +
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 84 WNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
+N M+ G+ G+ + A L K VI + ++T + G +EALK+F +M+
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
+ PN T+ ++ L ++ + K G N R V+ +++ K +L
Sbjct: 371 KDAA--PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 200 HIARKIFD--DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
A +F+ D + D I++ +I G ++A ++ KM + + N + Y L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 258 LTACSHAGLVDEGIQYFDKLL 278
+ + G ++G + + ++
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMI 509
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 126/268 (47%), Gaps = 23/268 (8%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ 62
F M+E+ D ++ ++DG K G+++ A L + M + VV++ ++I G A+
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 63 NRRLDEALELFE----RMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVIT 114
RLDEA LFE + E ++ +++++ GF + G ++ A + EL QK ++ T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
W S++ + EAL F M+ PN T+ ++ + + Q +
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMK-ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM 753
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFD----DGLLRQRDLISWNGMIAAYAHHG 230
K G + +T + +I+ +K G + A +FD +G + D +N MI ++
Sbjct: 754 QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP--DSACYNAMIEGLSNGN 811
Query: 231 YGNEAINLFNKMQELGFQANDVTYVELL 258
+A +LF + + G ++ T V LL
Sbjct: 812 RAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 144/314 (45%), Gaps = 16/314 (5%)
Query: 12 NQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVV----SWNAMITGYAQNRRLD 67
NQ D+ T +D + K+G + RA+F+ + R V S++ +I G + +
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 68 EALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMM 119
E ELF M E+ D ++N ++ GF + G++N+A +L E+ K V+T+ S++
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
G A+ +EA +F + ++ ++ N + +++ + + E I + + + G
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKR-IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDD--GLLRQRDLISWNGMIAAYAHHGYGNEAIN 237
N ++L++ K E++ A F L + +++ +I N+A
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
+ +MQ+ G + + ++Y +++ + AG + E FD+ N + Y +++
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP-DSACYNAMIEGL 807
Query: 298 GRAGRLKEAFYIIE 311
R +AF + E
Sbjct: 808 SNGNRAMDAFSLFE 821
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 148/342 (43%), Gaps = 27/342 (7%)
Query: 64 RRL---DEALELF---ERMPERDMA--SWNAMLTGFFQNGELNRAEKLFAELPQ----KD 111
RRL + A+E F ER E S+N++L + + +++ E+
Sbjct: 73 RRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPS 132
Query: 112 VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLAS----LTEG 167
V T M+ G + E + +M +P + T++GA S + LT
Sbjct: 133 VNTCIEMVLGCVKANKLREGYDV-VQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 168 QQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD--GLLRQRDLISWNGMIAA 225
QQ+ +L G++ + + LI ++K G + A + D+ D++ +N I +
Sbjct: 192 QQMQEL----GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQV 285
+ G + A F++++ G + ++VTY ++ A +DE ++ F+ L KNR +
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 286 KEDHYACLVDLCGRAGRLKEAFYIIE---GLGVKLSLSVWGPLLAGCNVHGNADIGKLVA 342
Y ++ G AG+ EA+ ++E G S+ + +L G D V
Sbjct: 308 TY-AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366
Query: 343 KKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+++ K N TY++L +M GK A +R M+ GL
Sbjct: 367 EEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 142/277 (51%), Gaps = 21/277 (7%)
Query: 2 WEDRGCTMAFNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSW 53
W D + + M ER +V ++ +++D AK G++ +A LFD M R N+V++
Sbjct: 291 WSD--ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 54 NAMITGYAQNRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQ 109
N++I G+ + RLDEA ++F M + D+ ++N ++ GF + ++ +LF ++ +
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 110 K----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ + +T+T+++ G+ Q + A +F +M ++ G+ PN T+ T+L L
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLE 467
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMI 223
+ + + + K+ + + + + K G++ +F L+ + D+I++N MI
Sbjct: 468 KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA 260
+ + G EA LF KM+E G + TY L+ A
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 174/386 (45%), Gaps = 20/386 (5%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALE 71
+ D ++TT+V GL + + +A AL +RM ++ ++V++ A+I G + D AL
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 72 LFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYA 123
L +M E D+ ++ ++ + ++ A LF E+ K DV T++S+++
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
+G +A ++ + M + PN TF +++ A + L E +++ + + N
Sbjct: 287 NYGRWSDASRLLSDMLER-KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQ--RDLISWNGMIAAYAHHGYGNEAINLFNK 241
++LIN + L A++IF + + D++++N +I + + + LF
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAG 301
M G N VTY L+ A D F +++ + + Y L+D + G
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNG 464
Query: 302 RLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKVEHENAGTYS 357
+L++A + E L ++ + + + G G + G L LK + Y+
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 358 LLSNMYASVGKWKEAANVRMKMKDKG 383
+ + + G +EA + +KMK+ G
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/365 (18%), Positives = 148/365 (40%), Gaps = 51/365 (13%)
Query: 34 RIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMP----ERDMASWN 85
++D+A LF M P ++V ++ +++ A+ ++ D + E+M ++ ++N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 86 AMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
M+ + +L+ A + ++ + ++T S++ G+ EA+ + +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM-VE 163
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
G +P+ TF T+ +H L E +V ++ C
Sbjct: 164 MGYQPDTVTFTTL---------------VHGLFQHNKASEAVALVERMV--VKGC----- 201
Query: 202 ARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTAC 261
Q DL+++ +I G + A+NL NKM++ +A+ V Y ++ +
Sbjct: 202 -----------QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 262 SHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLS 318
VD+ + F + + N+ I+ Y+ L+ GR +A ++ + + +
Sbjct: 251 CKYRHVDDALNLFTE-MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 319 LSVWGPLLAGCNVHGN-ADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRM 377
+ + L+ G + KL + I + N TY+ L N + + EA +
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 378 KMKDK 382
M K
Sbjct: 370 LMVSK 374
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 179/395 (45%), Gaps = 55/395 (13%)
Query: 10 AFNQMQERDVS----SWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYA 61
F +M E VS ++ ++ G +G ID A LFD+M L NVV++N +I GY
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 62 QNRRLDEALELFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVI 113
+ R++D+ +L M E ++ S+N ++ G + G + + E+ ++ D +
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
T+ +++ GY + G +AL M +M +G L P+ T+ +++ + ++ +
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHG-LTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 174 ISKTGFQENTRVVSALINMYSKCGELH----IARKIFDDGLLRQRDLISWNGMIAAYAHH 229
+ G N R + L++ +S+ G ++ + R++ D+G ++++N +I +
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF--SPSVVTYNALINGHCVT 428
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH 289
G +AI + M+E G + V+Y +L+ + VDE ++ ++++ + I+
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE-KGIKPDTIT 487
Query: 290 YACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVE 349
Y+ L+ R KEA + E + L V P
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEM-----LRVGLP------------------------- 517
Query: 350 HENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+ TY+ L N Y G ++A + +M +KG+
Sbjct: 518 -PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 142/315 (45%), Gaps = 21/315 (6%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRN-----VVSWNAMITGYAQNRRLDEALEL 72
D ++ T++ G K G A + M LR+ V+++ ++I + ++ A+E
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEM-LRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 73 FERMPERDMA----SWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQ 124
++M R + ++ ++ GF Q G +N A ++ E+ V+T+ +++ G+
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 125 HGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTR 184
G E+A+ + M+ G L P+ ++ TVL + E ++ + + + G + +T
Sbjct: 428 TGKMEDAIAVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 185 VVSALINMYSKCGELHIARKIFDDGLLR---QRDLISWNGMIAAYAHHGYGNEAINLFNK 241
S+LI + + A ++++ +LR D ++ +I AY G +A+ L N+
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEE-MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAG 301
M E G + VTY L+ + E + KL S+ + Y L++ C
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP-SDVTYHTLIENCSNI- 603
Query: 302 RLKEAFYIIEGLGVK 316
K +I+G +K
Sbjct: 604 EFKSVVSLIKGFCMK 618
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 148/285 (51%), Gaps = 19/285 (6%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ 62
+M+ER D ++ ++DGL K G +D+A LF+ M ++ +++++N +I G+
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDV----IT 114
R D+ +L M +R ++ +++ ++ F + G+L A++L E+ Q+ + IT
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+ S++ G+ + EEA++M M + G P+ TF ++ + +G ++ + +
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKG-CDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYG 232
S G NT + L+ + + G+L +A+K+F + + R + D++S+ ++ +G
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
+A+ +F K+++ + + Y+ ++ +A VD+ F L
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 182/396 (45%), Gaps = 21/396 (5%)
Query: 7 CTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQ 62
C F+ +R++S + GL + DDA LF M PL V+ +N + + A+
Sbjct: 42 CERGFSTFSDRNLSYRDKLSSGLV-GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAK 100
Query: 63 NRRLDEALELFERMPERDMA----SWNAMLTGFFQNGELNRAEKLFAELP----QKDVIT 114
++ + L L ++M + +A + + M+ F + +L+ A ++ + D +
Sbjct: 101 TKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+ +++ G EAL++ +M G KP T T++ +++ + +
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRM-VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYG 232
+TGFQ N ++N+ K G+ +A ++ R + D + ++ +I G
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC 292
+ A NLFN+M+ GF+A+ +TY L+ +AG D+G + ++K R I ++
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK-RKISPNVVTFSV 338
Query: 293 LVDLCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKV 348
L+D + G+L+EA +++ + G+ + + L+ G C + + ++V I K
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 349 EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+ T+++L N Y + + + +M +G+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 131/262 (50%), Gaps = 17/262 (6%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
+V +++ ++D K G++ +A L M R N +++N++I G+ + RL+EA+++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI----TWTSMMTGYAQH 125
+ M + D+ ++N ++ G+ + ++ +LF E+ + VI T+ +++ G+ Q
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G E A K+F +M + ++P+ ++ +L L + +I I K+ + + +
Sbjct: 452 GKLEVAKKLFQEMVSRR-VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 186 VSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
+I+ ++ A +F L+ + D ++N MI+ ++A LF KM
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 244 ELGFQANDVTYVELLTACSHAG 265
E G +++TY L+ A H G
Sbjct: 571 EEGHAPDELTYNILIRA--HLG 590
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 49/231 (21%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALE 71
+ D+ ++ +++G K+ RIDD LF M LR N V++N ++ G+ Q+ +L+ A +
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRA-------EK------------------ 102
LF+ M R D+ S+ +L G NGEL +A EK
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 103 ----------LFAELPQK----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
LF LP K D + M++ + +A +F KM G P+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH-APDE 578
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
T+ ++ A G T ++ + + +GF + V +INM S GEL
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS-GEL 628
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 189/421 (44%), Gaps = 56/421 (13%)
Query: 19 VSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELFE 74
V ++ M+D + K G ++ AR LF+ M R + V++N+MI G+ + RLD+ + FE
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 75 RMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHG 126
M E D+ ++NA++ F + G+L + + E+ + +V+++++++ + + G
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 127 LSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV 186
+ ++A+K + M+ GL PN T+ +++ A + +L++ ++ + + G + N
Sbjct: 382 MMQQAIKFYVDMR-RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 187 SALINMYSKCGELHIARKIFD--DGLLRQRDLISWNGMIAAYAHHGYGNEAINLF----- 239
+ALI+ + A ++F D +L S+N +I + + A+ L
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 240 ------------------------------NKMQELGFQANDVTYVELLTACSHAGLVDE 269
N+M+E G +AN + Y L+ A +G E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 270 GIQYFDKLLKNRSIQVKEDHYACLVD-LCGRAGRLKEAFY---IIEGLGVKLSLSVWGPL 325
G+ D+ +K I+V + L+D LC K Y I G++ + +++ +
Sbjct: 561 GLHLLDE-MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 326 LAG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+ G C + L + + K + Y+ L + G EA +R KM + G+
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 385 K 385
K
Sbjct: 680 K 680
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 139/326 (42%), Gaps = 55/326 (16%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQNRRLDEALE 71
E +V ++T ++DGL + R+ +A LF +M + N+ S+NA+I G+ + + +D ALE
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDV----ITWTSMMTGYA 123
L + R D+ + + G ++ A+ + E+ + + + +T++M Y
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVL-GACSGLASLTEGQQIHQLISKTGFQEN 182
+ G E L + +M+ ++ TF ++ G C +++ + G Q N
Sbjct: 554 KSGNPTEGLHLLDEMK-ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 183 TRVVSALINMYSKCGELHIARKIFDD----GLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
+ +A+I+ K ++ A +F+ GL+ R ++ ++ G EA+ L
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR--TAYTSLMDGNFKQGNVLEALAL 670
Query: 239 FNKMQELGFQANDVTYVELLTACSHA---------------------------------- 264
+KM E+G + + + Y L+ SH
Sbjct: 671 RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYE 730
Query: 265 -GLVDEGIQYFDKLLKNRSIQVKEDH 289
G +DE ++ L+K++ + D+
Sbjct: 731 LGCIDEAVELQSYLMKHQLLTSDNDN 756
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 136/312 (43%), Gaps = 12/312 (3%)
Query: 84 WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTG----YAQHGLSEEALKMFTKMQ 139
++A+ + G L A + F+++ + V T G +A+ G +++ + F M
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM- 253
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
G +P T+ ++ + + + + + G +T +++I+ + K G L
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 200 HIARKIFDD--GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
F++ + + D+I++N +I + G + + +M+ G + N V+Y L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 258 LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYI---IEGLG 314
+ A G++ + I+++ ++ + E Y L+D + G L +AF + + +G
Sbjct: 374 VDAFCKEGMMQQAIKFYVD-MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 315 VKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAA 373
V+ ++ + L+ G C+ + +L K N +Y+ L + + A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 374 NVRMKMKDKGLK 385
+ ++K +G+K
Sbjct: 493 ELLNELKGRGIK 504
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 186/399 (46%), Gaps = 28/399 (7%)
Query: 11 FNQMQE----RDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ 62
FN+M+ V + ++DGL K R++DA LFD M R +++++N +I GY +
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 63 NRRLDEALELFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVIT 114
+++ ++ ERM E + ++N +L G F+ G + AE + E+ D T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
++ + GY+ + +E AL ++ + + G+K N T +L A + + ++I
Sbjct: 322 FSILFDGYSSNEKAEAALGVY-ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIAR-KIFDDGLLRQ---RDLISWNGMIAAYAHHG 230
G N + + +I+ Y + G+L AR KI + + +Q D +++N +I + G
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI--EAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 231 YGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
A NKM+ G + TY L+ D+ ++ N ++ Y
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP-NVVSY 497
Query: 291 ACLVDLCGRAGRLKEAFYI---IEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILK 347
L++ + +L EA + +E GV + ++ L+ GC G + +K++LK
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 348 VEHE-NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
E N TY+ L + + GK EA ++ +++ KGLK
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 136/316 (43%), Gaps = 69/316 (21%)
Query: 2 WEDRGCTMAFNQMQER----DVSSWTTMVDGLAKSGRIDDA----RALFDRMPLRNVVSW 53
+E C +M++ +V S+ T+++ L K ++ +A R + DR V +
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532
Query: 54 NAMITGYAQNRRLDEAL----ELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQ 109
N +I G ++++A E+ ++ E ++ ++N ++ G G+L+ AE L E+ +
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 110 K----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
K DV T+ S+++GY G + + ++ +M+ G+KP T+ ++ C+
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK-RSGIKPTLKTYHLLISLCT------ 645
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAA 225
K G + R+ GE+ + + DL+ +NG++
Sbjct: 646 ----------KEGIELTERLF----------GEMSL-----------KPDLLVYNGVLHC 674
Query: 226 YAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA-------CSHAGLVDEGIQYFDKLL 278
YA HG +A NL +M E + TY L+ C L+DE +
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE--------M 726
Query: 279 KNRSIQVKEDHYACLV 294
R ++ + D Y +V
Sbjct: 727 NAREMEPEADTYNIIV 742
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 157/342 (45%), Gaps = 55/342 (16%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEA 69
E D+ ++T++++G RI+DA ALFD++ P NVV++ +I +NR L+ A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP--NVVTYTTLIRCLCKNRHLNHA 207
Query: 70 LELFERM----PERDMASWNAMLTG----------------------------------- 90
+ELF +M ++ ++NA++TG
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 91 FFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKP 146
F + G+L A++L+ + Q DV T+ S++ G +GL +EA +MF M+ N G P
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN-GCYP 326
Query: 147 NNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF 206
N + T++ + +G +I +S+ G NT + LI Y G +A+++F
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 207 DDGLLRQ--RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+ R+ D+ ++N ++ +G +A+ +F M++ N VTY ++
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEA 306
G V++ F L ++ ++ Y ++ R G + EA
Sbjct: 447 GKVEDAFDLFCSLF-SKGMKPNVITYTTMISGFCRRGLIHEA 487
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/423 (19%), Positives = 181/423 (42%), Gaps = 55/423 (13%)
Query: 17 RDVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALEL 72
R SS+ ++ + + +DA LF RM PL +++ + +++ A+ R D + L
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 73 FERMP---------------------------------------ERDMASWNAMLTGFFQ 93
FE+M E D+ ++ ++L G+
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165
Query: 94 NGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNG 149
+ A LF ++ + +V+T+T+++ ++ A+++F +M NG +PN
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS-RPNVV 224
Query: 150 TFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDG 209
T+ ++ + + + + + K + N +ALI+ + K G+L A+++++
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 210 LLRQ--RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 267
+ D+ ++ +I +G +EA +F M+ G N+V Y L+ + V
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 268 DEGIQYFDKLLKNRSIQVKEDHYACLVD---LCGRAGRLKEAFYIIEGLGVKLSLSVWGP 324
++G++ F ++ + + Y L+ L GR +E F + + +
Sbjct: 345 EDGMKIFYEM-SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 325 LLAGCNVHGNADIGKLVAKKILKVEHE-NAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 383
LL G +G + ++ + + K E + N TY+++ +GK ++A ++ + KG
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 384 LKK 386
+K
Sbjct: 464 MKP 466
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 17/254 (6%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALE 71
E +V ++T ++D K G++ +A+ L++ M +V ++ ++I G LDEA +
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 72 LFERMPERDMASWN-----AMLTGFFQNGELNRAEKLFAELPQKDV----ITWTSMMTGY 122
+F M ER+ N ++ GF ++ + K+F E+ QK V IT+T ++ GY
Sbjct: 315 MFYLM-ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
G + A ++F +M + P+ T+ +L + + I + + K N
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFN 240
+ +I K G++ A +F + + ++I++ MI+ + G +EA +LF
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 241 KMQELGFQANDVTY 254
KM+E GF N+ Y
Sbjct: 493 KMKEDGFLPNESVY 506
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 17/157 (10%)
Query: 11 FNQMQERDVS----SWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ 62
F +M ++ V ++T ++ G GR D A+ +F++M R ++ ++N ++ G
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Query: 63 NRRLDEALELFERMPERDM----ASWNAMLTGFFQNGELNRAEKLFAELPQK----DVIT 114
N ++++AL +FE M +R+M ++ ++ G + G++ A LF L K +VIT
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF 151
+T+M++G+ + GL EA +F KM+ +G L PN +
Sbjct: 471 YTTMISGFCRRGLIHEADSLFKKMKEDGFL-PNESVY 506
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 25/337 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
DV ++ ++D L K G DA+ LF M + NV ++N MI G+ R +A L
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
M ER D+ ++NA+++ + G+L AEKL E+ + D +T+ SM+ G+ +H
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
++A MF M + P+ TF T++ + EG Q+ + IS+ G NT
Sbjct: 415 NRFDDAKHMFDLMAS-----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 186 VSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
+ LI+ + + L+ A+ +F + + D I+ N ++ + + EA+ LF +Q
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVD-LCGRAGR 302
+ V Y ++ VDE F L ++ Y ++ CG++
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMISGFCGKSA- 587
Query: 303 LKEA---FYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ +A F+ ++ G + S + L+ GC G D
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 42/271 (15%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D ++ +M+ G K R DDA+ +FD M +VV++N +I Y + +R+DE ++L +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 78 ER----DMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQHGLSE 129
R + ++N ++ GF + LN A+ LF E+ D IT ++ G+ ++ E
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSAL 189
EAL++F +Q + + + G C G + + E + + G +
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKG-SKVDEAWDLFCSLPIHGVEP-------- 570
Query: 190 INMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQA 249
D+ ++N MI+ + ++A LF+KM++ G +
Sbjct: 571 -------------------------DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 250 NDVTYVELLTACSHAGLVDEGIQYFDKLLKN 280
++ TY L+ C AG +D+ I+ ++ N
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 173/395 (43%), Gaps = 28/395 (7%)
Query: 11 FNQMQE----RDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ 62
F+QM E V ++ T+++GL GR+ +A AL ++M + +VV++ ++ G +
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVIT 114
AL L +M E D+ ++A++ ++G + A+ LF+E+ +K +V T
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+ M+ G+ G +A ++ M + P+ TF ++ A L E +++ +
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDM-IEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNE 234
+T +++I + K A+ +FD L+ D++++N +I Y +E
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD--LMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 235 AINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLV 294
+ L ++ G AN TY L+ ++ F +++ S V D C +
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI---SHGVCPDTITCNI 507
Query: 295 DLCG--RAGRLKEA---FYIIEGLGVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKV 348
L G +L+EA F +I+ + L + ++ G C + L +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 349 EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 383
+ TY+++ + + +A + KMKD G
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 32/284 (11%)
Query: 35 IDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMPER----DMASWNA 86
+DDA FD M P V N +I + + R D A+ L+ +M R ++ S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 87 MLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
++ F +L+ + F +L Q DV+T+ +++ G EAL +F M G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 143 GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA 202
L+ V + + + LI+ + +AL+N G LHI
Sbjct: 207 FLEA-----VALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG-LHI- 259
Query: 203 RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACS 262
D++++ ++ G A+NL +KM+E + + V Y ++
Sbjct: 260 ------------DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 263 HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEA 306
G + F ++L+ + I Y C++D GR +A
Sbjct: 308 KDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDA 350
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 25/337 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
DV ++ ++D L K G DA+ LF M + NV ++N MI G+ R +A L
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
M ER D+ ++NA+++ + G+L AEKL E+ + D +T+ SM+ G+ +H
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
++A MF M + P+ TF T++ + EG Q+ + IS+ G NT
Sbjct: 415 NRFDDAKHMFDLMAS-----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 186 VSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
+ LI+ + + L+ A+ +F + + D I+ N ++ + + EA+ LF +Q
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVD-LCGRAGR 302
+ V Y ++ VDE F L ++ Y ++ CG++
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMISGFCGKSA- 587
Query: 303 LKEA---FYIIEGLGVKLSLSVWGPLLAGCNVHGNAD 336
+ +A F+ ++ G + S + L+ GC G D
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 42/271 (15%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
D ++ +M+ G K R DDA+ +FD M +VV++N +I Y + +R+DE ++L +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 78 ER----DMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQHGLSE 129
R + ++N ++ GF + LN A+ LF E+ D IT ++ G+ ++ E
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSAL 189
EAL++F +Q + + + G C G + + E + + G +
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKG-SKVDEAWDLFCSLPIHGVEP-------- 570
Query: 190 INMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQA 249
D+ ++N MI+ + ++A LF+KM++ G +
Sbjct: 571 -------------------------DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 250 NDVTYVELLTACSHAGLVDEGIQYFDKLLKN 280
++ TY L+ C AG +D+ I+ ++ N
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 173/395 (43%), Gaps = 28/395 (7%)
Query: 11 FNQMQE----RDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ 62
F+QM E V ++ T+++GL GR+ +A AL ++M + +VV++ ++ G +
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVIT 114
AL L +M E D+ ++A++ ++G + A+ LF+E+ +K +V T
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+ M+ G+ G +A ++ M + P+ TF ++ A L E +++ +
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDM-IEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNE 234
+T +++I + K A+ +FD L+ D++++N +I Y +E
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD--LMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 235 AINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLV 294
+ L ++ G AN TY L+ ++ F +++ + V D C +
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH---GVCPDTITCNI 507
Query: 295 DLCG--RAGRLKEA---FYIIEGLGVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKV 348
L G +L+EA F +I+ + L + ++ G C + L +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 349 EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 383
+ TY+++ + + +A + KMKD G
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRLDEALELF 73
+ +++ T++ G + ++ A+ LF M V ++ N ++ G+ +N +L+EALELF
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 74 ERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQH 125
E + + D ++N ++ G + +++ A LF LP + DV T+ M++G+
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQ 180
+A +F KM+ NG +P+N T+ T++ C + + ++ + GF
Sbjct: 586 SAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 62/299 (20%)
Query: 35 IDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMPER----DMASWNA 86
+DDA FD M P V N +I + + R D A+ L+ +M R ++ S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 87 MLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANG 142
++ F +L+ + F +L Q DV+T+ +++ G EAL +F M G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 143 --------------GLKPNNGTFVTVL-GACSGLASLTEGQQIHQLISKTGFQENTRVVS 187
GL P TF T++ G C EG+ + +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLC------LEGRVLE--------------AA 246
Query: 188 ALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGF 247
AL+N G LHI D++++ ++ G A+NL +KM+E
Sbjct: 247 ALVNKMVGKG-LHI-------------DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 248 QANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEA 306
+ + V Y ++ G + F ++L+ + I Y C++D GR +A
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDA 350
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 188/422 (44%), Gaps = 56/422 (13%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR-NVVSWNAMITGYAQNRRLDEALELFERM 76
DV ++ M+ G K+G I++A ++ DRM + +VV++N ++ + +L +A+E+ +RM
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 77 PER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLS 128
+R D+ ++ ++ ++ + A KL E+ + DV+T+ ++ G + G
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
+EA+K M ++ G +PN T +L + + +++ + + GF + +
Sbjct: 291 DEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 189 LINMYSKCGELHIARKIFDD------------------GLLRQR---------------- 214
LIN + G L A I + G +++
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 215 ---DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGI 271
D++++N M+ A G +A+ + N++ G +TY ++ + AG + I
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 272 QYFDKLLKNRSIQVKED--HYACLVDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLL 326
+ D++ R+ +K D Y+ LV R G++ EA F+ E +G++ + + ++
Sbjct: 470 KLLDEM---RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 327 AG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
G C + I + N +Y++L A G KEA + ++ +KGL
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Query: 386 KQ 387
K+
Sbjct: 587 KK 588
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 113/264 (42%), Gaps = 9/264 (3%)
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
EE K M +G + P+ T++ L + +I +++ +G + +
Sbjct: 119 EEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 189 LINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
+I+ Y K GE++ A + D + D++++N ++ + G +A+ + ++M +
Sbjct: 178 MISGYCKAGEINNALSVLDR-MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 249 ANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFY 308
+ +TY L+ A V ++ D+ +++R Y LV+ + GRL EA
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDE-MRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 309 IIEGL---GVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYA 364
+ + G + ++ +L C+ D KL+A + K + T+++L N
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 365 SVGKWKEAANVRMKMKDKGLKKQP 388
G A ++ KM G QP
Sbjct: 356 RKGLLGRAIDILEKMPQHGC--QP 377
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 186/413 (45%), Gaps = 40/413 (9%)
Query: 1 MWEDRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWN 54
M ED+ C ++ ++ MV+G K G +++A ++ P + ++
Sbjct: 209 MLEDKVCP---------NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDP--DFFTYT 257
Query: 55 AMITGYAQNRRLDEALELFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQK 110
++I GY Q + LD A ++F MP R+ ++ ++ G ++ A LF ++
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317
Query: 111 D----VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTE 166
+ V T+T ++ EAL + +M+ G+KPN T+ ++ + +
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET-GIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 167 GQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI----SWNGM 222
+++ + + G N +ALIN Y K G + A + + L+ R L ++N +
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE--LMESRKLSPNTRTYNEL 434
Query: 223 IAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRS 282
I Y ++A+ + NKM E + VTY L+ +G D + L+ +R
Sbjct: 435 IKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS-LMNDRG 492
Query: 283 IQVKEDHYACLVDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGK 339
+ + Y ++D ++ R++EA F +E GV ++ ++ L+ G G D
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 340 LVAKKIL-KVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 391
L+ +K+L K N+ T++ L + + GK KEA + KM GL QP S
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL--QPTVS 603
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 181/400 (45%), Gaps = 31/400 (7%)
Query: 10 AFNQMQ----ERDVSSWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYA 61
FN+M R+ ++T ++ GL + RID+A LF +M V ++ +I
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 62 QNRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVI 113
+ R EAL L + M E ++ ++ ++ + +A +L ++ +K +VI
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL-GACSGLASLTEGQQIHQ 172
T+ +++ GY + G+ E+A+ + M++ L PN T+ ++ G C +++ + +
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRK-LSPNTRTYNELIKGYCK--SNVHKAMGVLN 451
Query: 173 LISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI----SWNGMIAAYAH 228
+ + + ++LI+ + G A ++ L+ R L+ ++ MI +
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL--SLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 229 HGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED 288
EA +LF+ +++ G N V Y L+ AG VDE +K+L +
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 289 HYACLVDLCGRAGRLKEAFYIIE---GLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKI 345
A + LC G+LKEA + E +G++ ++S L+ G+ D +++
Sbjct: 570 FNALIHGLCA-DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 346 LKV-EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
L +A TY+ Y G+ +A ++ KM++ G+
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 20/263 (7%)
Query: 14 MQERDVS----SWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQNRR 65
M+ R +S ++ ++ G KS + A + ++M L +VV++N++I G ++
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 66 LDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTS 117
D A L M +R D ++ +M+ ++ + A LF L QK +V+ +T+
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 118 MMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT 177
++ GY + G +EA M KM + L PN+ TF ++ L E + + + K
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 178 GFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEA 235
G Q + LI+ K G+ A F L + D ++ I Y G +A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 236 INLFNKMQELGFQANDVTYVELL 258
++ KM+E G + TY L+
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLI 679
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 11/244 (4%)
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR----K 204
G + T+L + + + E +Q++ + + N + ++N Y K G + A K
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
I + GL D ++ +I Y + A +FN+M G + N+V Y L+ A
Sbjct: 244 IVEAGL--DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYII---EGLGVKLSLSV 321
+DE + F K+ + + + LCG + R EA ++ E G+K ++
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG-SERKSEALNLVKEMEETGIKPNIHT 360
Query: 322 WGPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
+ L+ C+ +L+ + + K N TY+ L N Y G ++A +V M+
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 381 DKGL 384
+ L
Sbjct: 421 SRKL 424
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 183/394 (46%), Gaps = 28/394 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
+V ++T ++ GL + GRI +A ++ ++ R ++V+++++I G+ + L L+
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 74 ERMPE----RDMASWNAMLTGFFQNGELNRA----EKLFAELPQKDVITWTSMMTGYAQH 125
E M + D+ + ++ G + G + A K+ + + +V+ + S++ G+ +
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVL-------GACSGLASLTEGQQIHQLISKTG 178
+EALK+F ++ G+KP+ TF TV+ C + T G Q+ L+ +
Sbjct: 510 NRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNK 567
Query: 179 FQENTRVVSALINMYSKCGELHIARKIFDDGL--LRQRDLISWNGMIAAYAHHGYGNEAI 236
+ V + +I++ KC + A K F++ + + D++++N MI Y +EA
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Query: 237 NLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDL 296
+F ++ F N VT L+ +D I+ F ++ + + Y CL+D
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVTYGCLMDW 686
Query: 297 CGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH-EN 352
++ ++ +F + E + G+ S+ + ++ G G D + + + + +
Sbjct: 687 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 746
Query: 353 AGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
Y++L Y VG+ EAA + M G+K
Sbjct: 747 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 41 LFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER----DMASWNAMLTGFFQNGE 96
+ D P NVV++ +I G+ + +D A +LF+ M +R D+ +++ ++ G+F+ G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 97 LNRAEKLFAELPQK----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFV 152
L KLF++ K DV+ ++S + Y + G A ++ +M G+ PN T+
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISPNVVTYT 395
Query: 153 TVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR 212
++ + E ++ I K G + + S+LI+ + KCG L +++D
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED---- 451
Query: 213 QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ 272
M ++G+ + V Y L+ S GL+ ++
Sbjct: 452 -----------------------------MIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 273 YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGV 315
+ K+L +SI++ + L+D R R EA + +G+
Sbjct: 483 FSVKML-GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 29/236 (12%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGY 60
F+ MQ D++ ++ L K RI+DA F+ + P ++V++N MI GY
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP--DIVTYNTMICGY 617
Query: 61 AQNRRLDEALELFERMPERDMASWNAMLTGFF----QNGELNRAEKLFAELPQK----DV 112
RRLDEA +FE + LT +N +++ A ++F+ + +K +
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
+T+ +M +++ E + K+F +MQ G+ P+ ++ ++ + E I
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFH 736
Query: 173 LISKTGFQENTRVVSALINMYSKCGEL--------HIARKIFDDGLLRQRDLISWN 220
+ + LI Y K G L H+ R L QR L +N
Sbjct: 737 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYN 792
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 138/333 (41%), Gaps = 19/333 (5%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVV----SWNAMITGYAQNRRLDEALELF 73
D +++ + G +D A +F VV S M+ + R+D + F
Sbjct: 145 DADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204
Query: 74 ERM-----PERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLS 128
+++ +++ +L F GE+ +A F L + + GLS
Sbjct: 205 DKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALD-FHRLVMERGFRVGIVSCNKVLKGLS 263
Query: 129 EEALKMFTKMQA---NGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
+ +++ +++ + + G PN TF T++ + + +++ + G + +
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 186 VSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
S LI+ Y K G L + K+F L + + D++ ++ I Y G A ++ +M
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRL 303
G N VTY L+ G + E + ++LK R ++ Y+ L+D + G L
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKCGNL 442
Query: 304 KEAFYIIEG---LGVKLSLSVWGPLLAGCNVHG 333
+ F + E +G + ++G L+ G + G
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 195/454 (42%), Gaps = 75/454 (16%)
Query: 5 RGCTMAFNQM-------QERDVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVV 51
R ++AF+ M E D +++T+++GL GR+ +A L DRM P ++
Sbjct: 121 RKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP--TLI 178
Query: 52 SWNAMITGYAQNRRLDE-----------------------------------ALELFERM 76
+ NA++ G N ++ + A+EL +M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 77 PER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLS 128
ER D ++ ++ G ++G L+ A LF E+ K D+I +T+++ G+ G
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
++ K+ M + P+ F ++ L E +++H+ + + G +T ++
Sbjct: 299 DDGAKLLRDM-IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 189 LINMYSKCGELHIARKIFDDGLLRQR----DLISWNGMIAAYAHHGYGNEAINLFNKMQE 244
LI+ + K +L A + D L+ + ++ ++N +I Y ++ + LF KM
Sbjct: 358 LIDGFCKENQLDKANHMLD--LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 245 LGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED--HYACLVD-LC--GR 299
G A+ VTY L+ G ++ + F +++ R V+ D Y L+D LC G
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR---VRPDIVSYKILLDGLCDNGE 472
Query: 300 AGRLKEAFYIIEGLGVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYSL 358
+ E F IE ++L + ++ ++ G CN D L LK + TY++
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 359 LSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSW 392
+ G EA + KM++ G GC++
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDG-HSPNGCTY 565
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 127/252 (50%), Gaps = 19/252 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
D ++T+++DG K ++D A + D M + N+ ++N +I GY + +D+ LELF
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
+M R D ++N ++ GF + G+L A++LF E+ + D++++ ++ G +
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G E+AL++F K++ + ++ + G + ++ + + + + + G + + +
Sbjct: 471 GEPEKALEIFEKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 186 VSALINMYSKCGELHIA----RKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ +I K G L A RK+ +DG + ++N +I A+ G ++ L +
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEEDG--HSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 242 MQELGFQANDVT 253
++ GF + T
Sbjct: 588 IKRCGFSVDAST 599
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 138/288 (47%), Gaps = 22/288 (7%)
Query: 36 DDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA----SWNAM 87
DDA LF M P ++ ++ + + A+ ++ D L+L ++M + +A + + M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 88 LTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGG 143
+ + +L+ A ++ + D +T+++++ G G EAL++ +M G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM-VEMG 172
Query: 144 LKPNNGTFVTVLGACSGLA---SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELH 200
KP T +T+ +GL +++ + + +TGFQ N ++ + K G+
Sbjct: 173 HKP---TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 201 IARKIFDDGLLRQ--RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL 258
+A ++ R+ D + ++ +I G + A NLFN+M+ GF+A+ + Y L+
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEA 306
+AG D+G + ++K R I ++ L+D + G+L+EA
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIK-RKITPDVVAFSALIDCFVKEGKLREA 336
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 174/386 (45%), Gaps = 24/386 (6%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
D ++TT++ GL + +A AL DRM R N+V++ ++ G + +D A L
Sbjct: 114 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 173
Query: 74 ERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
+M E D+ +N ++ + ++ A LF E+ K +V+T++S+++ +
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G +A ++ + M + PN TF ++ A E +++H + K +
Sbjct: 234 GRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 186 VSALINMYSKCGELHIARKIFDDGLLRQ--RDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
++LIN + L A+++F+ + + DL ++N +I + + LF +M
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED--HYACLVD-LC--G 298
G + VTY L+ H G D + F +++ + V D Y+ L+D LC G
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD---GVPPDIMTYSILLDGLCNNG 409
Query: 299 RAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKVEHENAGTYS 357
+ + E F ++ +KL + ++ ++ G G D G L LK N TY+
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 358 LLSNMYASVGKWKEAANVRMKMKDKG 383
+ + S +EA + KMK+ G
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 176/395 (44%), Gaps = 58/395 (14%)
Query: 9 MAFNQMQ-------ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMI 57
+AFN + E DV + T++D L K +DDA LF M + NVV+++++I
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 58 TGYAQNRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK--- 110
+ R +A +L M E+ ++ ++NA++ F + G+ AEKL ++ ++
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 111 -DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQ 169
D+ T+ S++ G+ H ++A +MF M + P+ T+ T++ + +G +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 170 IHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHH 229
+ + +S G +T +++ +I H
Sbjct: 347 LFREMSHRGLVGDT---------------------------------VTYTTLIQGLFHD 373
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH 289
G + A +F +M G + +TY LL + G +++ ++ FD + K+ I++
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKLDIYI 432
Query: 290 YACLVDLCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKI 345
Y +++ +AG++ + + + L GVK ++ + +++G C+ + L+ K
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
++GTY+ L + G +A + +M+
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/410 (18%), Positives = 181/410 (44%), Gaps = 33/410 (8%)
Query: 46 PLRNVVSWNAMITGYAQNRRLDEALELFERMPE----RDMASWNAMLTGFFQNGELNRAE 101
PL ++ +N +++ A+ ++ D + L E+M ++ ++N ++ F + +++ A
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 102 KLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGA 157
L ++ + ++T +S++ GY +A+ + +M G +P+ TF T++
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLIHG 124
Query: 158 CSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD--DGLLRQRD 215
+E + + + G Q N ++N K G++ +A + + + + D
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFD 275
++ +N +I + + + ++A+NLF +M+ G + N VTY L++ G + Q
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 276 KLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVH 332
+++ + I + L+D + G+ EA + + + + + + L+ G +H
Sbjct: 245 DMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 333 GNADIGKLVAKKILKVE-HENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 391
D K + + ++ + + TY+ L + + ++ + +M +GL
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL------- 356
Query: 392 WIEVGNTVQ-------VFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILD 434
VG+TV +F GD ++Q + + G+ + + +LD
Sbjct: 357 ---VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 140/277 (50%), Gaps = 21/277 (7%)
Query: 2 WEDRGCTMAFNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSW 53
W D + + M ER DV +++ ++D K G++ +A L+D M R ++V++
Sbjct: 307 WSD--ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 54 NAMITGYAQNRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQ 109
+++I G+ + RLDEA ++FE M + D+ ++N ++ GF + + ++F E+ Q
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 110 K----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ + +T+ ++ G Q G + A ++F +M ++ G+ PN T+ T+L L
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLE 483
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMI 223
+ + + + ++ + + +I K G++ +F + L+ + D++++N MI
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Query: 224 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTA 260
+ + G EA LF +M+E G N Y L+ A
Sbjct: 544 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 148/297 (49%), Gaps = 27/297 (9%)
Query: 5 RGCT-MAFNQMQ-------ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVS 52
RG T +AFN + E V + T++DGL K +DDA LF M + NVV+
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 53 WNAMITGYAQNRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELP 108
++++I+ R +A L M ER D+ +++A++ F + G+L AEKL+ E+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 109 QK----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL 164
++ ++T++S++ G+ H +EA +MF M + P+ T+ T++ +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRV 412
Query: 165 TEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIF----DDGLLRQRDLISWN 220
EG ++ + +S+ G NT + LI + G+ +A++IF DG+ +++++N
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV--PPNIMTYN 470
Query: 221 GMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
++ +G +A+ +F +Q + TY ++ AG V++G F L
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 185/427 (43%), Gaps = 39/427 (9%)
Query: 34 RIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA----SWN 85
++DDA ALF M P +++ ++ +++ A+ + D + L E+M + +++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 86 AMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
++ F + +L A + ++ + +++T +S++ GY EA+ + +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
G +PN TF T++ +E + + G Q + ++N K G+ +
Sbjct: 181 G-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 202 ARKIF---DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL 258
A + + G L LI +N +I + + ++A+NLF +M+ G + N VTY L+
Sbjct: 240 AFNLLNKMEQGKLEPGVLI-YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GV 315
+ + G + + +++ R I ++ L+D + G+L EA + + + +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 316 KLSLSVWGPLLAGCNVHGNADIGK-LVAKKILKVEHENAGTYSLLSNMYASVGKWKEAAN 374
S+ + L+ G +H D K + + K + TY+ L + + +E
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 375 VRMKMKDKGLKKQPGCSWIEVGNTVQ-------VFVVGDKSHSQSEMLEYLLLGLHTKMK 427
V +M +GL VGNTV +F GD +Q E + G+ +
Sbjct: 418 VFREMSQRGL----------VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 428 KFGDILD 434
+ +LD
Sbjct: 468 TYNTLLD 474
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 102/200 (51%), Gaps = 19/200 (9%)
Query: 10 AFNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRM-----PLRNVVSWNAMITGY 60
F +M +R + ++ ++ GL ++G D A+ +F M P N++++N ++ G
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP-PNIMTYNTLLDGL 476
Query: 61 AQNRRLDEALELFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DV 112
+N +L++A+ +FE + E + ++N M+ G + G++ LF L K DV
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
+ + +M++G+ + G EEA +F +M+ +G L PN+G + T++ A ++ +
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTLIRARLRDGDREASAELIK 595
Query: 173 LISKTGFQENTRVVSALINM 192
+ GF + + + NM
Sbjct: 596 EMRSCGFAGDASTIGLVTNM 615
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 186/394 (47%), Gaps = 25/394 (6%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRM-----PLRNVVSWNAMITGYAQNRRLDEALEL 72
++ + ++VD LA + +D R + + P+ V + NA+I + + ++E L +
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPM-TVSAANALIKSFGKLGMVEELLWV 209
Query: 73 FERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQ 124
+ +M E + ++N ++ G ++ AE++F + + D++T+ +M+ GY +
Sbjct: 210 WRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCK 269
Query: 125 HGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTR 184
G +++A++ M+ G + + T++T++ AC + ++Q + + G Q
Sbjct: 270 AGQTQKAMEKLRDMETRGH-EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH 328
Query: 185 VVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKM 242
S +I K G+L+ +F++ + + + ++ + +I YA G +AI L ++M
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 243 QELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGR 302
+ GF+ + VTY ++ G V+E + YF + + + Y+ L+D G+AGR
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT-CRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 303 LKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAGTYS-- 357
+ EA + E + G + L+ H D + K++ + E + Y+
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507
Query: 358 -LLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 390
LLS M+ + +EA + M DKG+ C
Sbjct: 508 ILLSGMFKE-HRNEEALKLWDMMIDKGITPTAAC 540
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 150/344 (43%), Gaps = 49/344 (14%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
D+ ++ TM+ G K+G+ A M R + +++ MI + + L+
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 74 ERMPERDMA----SWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
+ M E+ + +++ ++ G + G+LN +F + +K +V +T ++ GYA+
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G E+A+++ +M + G KP+ T+ V+ + E G N+
Sbjct: 376 GSVEDAIRLLHRM-IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 186 VSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
S+LI+ K G + A ++F++ + RD +N +I A+ H +EAI LF +M+
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 244 EL-GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKN---------------------- 280
E G TY LL+ +E ++ +D ++
Sbjct: 495 EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKV 554
Query: 281 -RSIQVKED--------HYAC--LVDLCGRAGRLKEAFYIIEGL 313
R+ ++ ++ AC +++ +AGR+KEA + +G+
Sbjct: 555 ARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGI 598
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 4 DRGCTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPL-----RNVVSWNAMIT 58
++GCT RD + ++D K ++D+A ALF RM + V ++ +++
Sbjct: 460 EKGCT--------RDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 59 GYAQNRRLDEALELFERMPERDM----ASWNAMLTGFFQNGELNRAEKLFAELPQKDVI- 113
G + R +EAL+L++ M ++ + A + A+ TG +G++ RA K+ EL VI
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 114 --TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL 155
M+ + G +EA K+ + G P G TV+
Sbjct: 572 DAACEDMINTLCKAGRIKEACKLADGITERGREVP--GRIRTVM 613
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 173/416 (41%), Gaps = 62/416 (14%)
Query: 22 WTTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGYAQNRRLDEALELFERMP 77
+T M+ L + G +D +FD MP R+V S+ A+I Y +N R + +LEL +RM
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 78 ERDMA----SWNAMLTGFFQNG-ELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLS 128
++ ++N ++ + G + LFAE+ Q D++T+ ++++ A GL
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLG 263
Query: 129 EEALKMFTKMQ----------------------------------ANGGLKPNNGTFVTV 154
+EA +F M A+GG P+ ++ +
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 155 LGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD--GLLR 212
L A + S+ E + + G N S L+N++ + G R++F +
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 213 QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ 272
D ++N +I + GY E + LF+ M E + + TY ++ AC GL ++ +
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 273 YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKE---AFYIIEGLGVKLSLSVWGPLL--- 326
+ N I Y +++ G+A +E AF + +G S+ + LL
Sbjct: 444 ILQYMTAN-DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Query: 327 --AGCNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
G A + +LV I + N T++ Y GK++EA + M+
Sbjct: 503 ARGGLVKESEAILSRLVDSGIPR----NRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 131/276 (47%), Gaps = 19/276 (6%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQNRRLDEALELF 73
D++S+ +++ AKSG I +A +F +M N +++ ++ + Q+ R D+ +LF
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 74 ERM----PERDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
M + D A++N ++ F + G LF ++ ++ D+ T+ ++ +
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
GL E+A K+ M AN + P++ + V+ A A E + + G +
Sbjct: 436 GLHEDARKILQYMTAND-IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 186 VSALINMYSKCGELH----IARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+L+ +++ G + I ++ D G+ R RD ++N I AY G EA+ +
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRD--TFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
M++ ++ T +L+ S A LVDE + F+++
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM 588
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 24/274 (8%)
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
+A G + +L++F MQ KPN + ++ L + ++ + G
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQRD------LISWNGMIAAYAHHGYGNEA 235
+ +ALIN Y + G + ++ D R ++ ++++N +I A A G E
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLD----RMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 236 -INLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLV 294
+ LF +M+ G Q + VTY LL+AC+ GL DE F + + + I Y+ LV
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVF-RTMNDGGIVPDLTTYSHLV 289
Query: 295 DLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE--- 351
+ G+ RL++ ++ + SL P + NV A K+ + V H+
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSL----PDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 352 -----NAGTYSLLSNMYASVGKWKEAANVRMKMK 380
NA TYS+L N++ G++ + + ++MK
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 140/314 (44%), Gaps = 48/314 (15%)
Query: 84 WNAMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
+ M++ + G L++ ++F E+P + V ++T+++ Y ++G E +L++ +M+
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
N + P+ T+ TV+ AC+ EG L+ ++++
Sbjct: 204 -NEKISPSILTYNTVINACARGGLDWEG---------------------LLGLFAEMRHE 241
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
I Q D++++N +++A A G G+EA +F M + G + TY L+
Sbjct: 242 GI-----------QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEA---FYIIEGLGVK 316
+++ ++ S+ Y L++ ++G +KEA F+ ++ G
Sbjct: 291 TFGKLRRLEKVCDLLGEMASGGSLP-DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 317 LSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHEN----AGTYSLLSNMYASVGKWKEA 372
+ + + LL N+ G + V + L+++ N A TY++L ++ G +KE
Sbjct: 350 PNANTYSVLL---NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 373 ANVRMKMKDKGLKK 386
+ M ++ ++
Sbjct: 407 VTLFHDMVEENIEP 420
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAIN 237
+ N + + +I++ + G L ++FD+ + R + S+ +I AY +G ++
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
L ++M+ + +TY ++ AC+ GL EG+ +++ IQ Y L+ C
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 298 GRAGRLKEA---FYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKV-----E 349
G EA F + G+ L+ + L+ GKL +++ KV E
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV--------ETFGKL--RRLEKVCDLLGE 307
Query: 350 HENAG------TYSLLSNMYASVGKWKEAANVRMKMKDKG 383
+ G +Y++L YA G KEA V +M+ G
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 146/281 (51%), Gaps = 26/281 (9%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQ 62
+++M +R D+ +++++++G R+D+A+ +F+ M NVV++N +I G+ +
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVIT 114
+R++E +ELF M +R + ++N ++ G FQ G+ + A+K+F ++ D+IT
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF-VTVLGACSGLASLTEGQQIHQL 173
++ ++ G ++G E+AL +F +Q ++P+ T+ + + G C + +G +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQ-KSKMEPDIYTYNIMIEGMCKA-GKVEDGWDLFCS 525
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIF----DDGLLRQRDLISWNGMIAAYAHH 229
+S G + N + + +I+ + + G A +F +DG L ++N +I A
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG--TYNTLIRARLRD 583
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
G + L +M+ GF D + + ++ H G +++
Sbjct: 584 GDKAASAELIKEMRSCGF-VGDASTISMVINMLHDGRLEKS 623
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 182/404 (45%), Gaps = 59/404 (14%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALE 71
E DV +TT++D L ++DA LF M + NVV++N++I R +A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYA 123
L M ER ++ +++A++ F + G+L AEKL+ E+ ++ D+ T++S++ G+
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
H +EA MF M + PN T+ T++ + EG ++ + +S+ G NT
Sbjct: 372 MHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
+ LI + G+ +A+KI F KM
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKI---------------------------------FKKMV 457
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRL 303
G + +TY LL G +++ + F+ L K++ ++ Y +++ +AG++
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK-MEPDIYTYNIMIEGMCKAGKV 516
Query: 304 KEAFYIIEGL---GVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYSLL 359
++ + + L GVK ++ ++ +++G C + L + N+GTY+ L
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Query: 360 SNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFV 403
+ A + +AA+ + +K+ C ++ +T+ + +
Sbjct: 577 --IRARLRDGDKAASAEL------IKEMRSCGFVGDASTISMVI 612
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 185/427 (43%), Gaps = 39/427 (9%)
Query: 34 RIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMP----ERDMASWN 85
++DDA LF M PL ++V +N +++ A+ + D + L ERM D+ S+N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 86 AMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
++ F + +L A + ++ + D++T +S++ GY EA+ + +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
+PN TF T++ +E + + G Q + ++N K G++ +
Sbjct: 180 E-YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 202 ARKIF---DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL 258
A + + G + + D++ + +I A ++ N+A+NLF +M G + N VTY L+
Sbjct: 239 ALSLLKKMEKGKI-EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GV 315
+ G + + +++ R I ++ L+D + G+L EA + + + +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 316 KLSLSVWGPLLAGCNVHGNADIGK-LVAKKILKVEHENAGTYSLLSNMYASVGKWKEAAN 374
+ + L+ G +H D K + I K N TY+ L + + +E
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 375 VRMKMKDKGLKKQPGCSWIEVGNTVQ-------VFVVGDKSHSQSEMLEYLLLGLHTKMK 427
+ +M +GL VGNTV +F GD +Q + + G+ +
Sbjct: 417 LFREMSQRGL----------VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 428 KFGDILD 434
+ +LD
Sbjct: 467 TYSILLD 473
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 143/278 (51%), Gaps = 19/278 (6%)
Query: 11 FNQM----QERDVSSWTTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGYAQ 62
F+QM + +V + T++DGL KS ++D+A L +RM +VV++N++I+G
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVIT 114
+ R +A + M +R D+ ++NA++ + G ++ AE+ + E+ ++ D++T
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
++ ++ G + +EA +MF M + G P+ T+ ++ + G ++ +
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL--RQRDLISWNGMIAAYAHHGYG 232
S+ G NT + LI Y + G+L++A +IF + ++I++N ++ +G
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
+A+ + MQ+ G A+ VTY ++ AG V +
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 19/250 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
DV ++ ++D K GR+ +A ++ M R ++V+++ +I G RLDEA E+F
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI----TWTSMMTGYAQH 125
M + D+ +++ ++ G+ ++ ++ KLF E+ Q+ V+ T+T ++ GY +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G A ++F +M G+ PN T+ +L + + I + K G +
Sbjct: 375 GKLNVAEEIFRRM-VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVT 433
Query: 186 VSALINMYSKCGELHIARKIFDD----GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ +I K GE+ A I+ GL+ D+ ++ M+ G EA LF K
Sbjct: 434 YNIIIRGMCKAGEVADAWDIYCSLNCQGLMP--DIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 242 MQELGFQAND 251
M+E G N+
Sbjct: 492 MKEDGILPNE 501
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 17/153 (11%)
Query: 11 FNQMQERDVS----SWTTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGYAQ 62
F +M +R V ++T ++ G ++G+++ A +F RM N++++N ++ G
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELP----QKDVIT 114
N ++++AL + M + D+ ++N ++ G + GE+ A ++ L D+ T
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPN 147
+T+MM G + GL EA +F KM+ +G L PN
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGIL-PN 500
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/396 (18%), Positives = 170/396 (42%), Gaps = 20/396 (5%)
Query: 7 CTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQ 62
C F++ + S + M+ + ++DD+ LF M PL ++ ++ +++ ++
Sbjct: 34 CGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK 93
Query: 63 NRRLDEALELFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAEL----PQKDVIT 114
++ D + L+E+M ++ + N +L F + +L+ A ++ + ++T
Sbjct: 94 MKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVT 153
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+ S++ G+ + +AL MF +M G KPN + T++ + + +
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQM-VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQ--RDLISWNGMIAAYAHHGYG 232
K G + ++LI+ G A ++ R+ D+ ++N +I A G
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC 292
+EA + +M + VTY L+ +DE + F + ++ Y+
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG-FMVSKGCFPDVVTYSI 331
Query: 293 LVDLCGRAGRLKEA---FYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKV- 348
L++ ++ +++ F + GV + + L+ G G ++ + + ++++
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 349 EHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
H N TY++L + GK ++A + M+ G+
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 157/309 (50%), Gaps = 28/309 (9%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
D ++ ++D KS R +A + + M L ++V++N++I+ YA++ LDEA+EL
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQH 125
+M E+ D+ ++ +L+GF + G++ A +F E+ + ++ T+ + + Y
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G E +K+F ++ GL P+ T+ T+L +E + + + + GF
Sbjct: 433 GKFTEMMKIFDEINV-CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 186 VSALINMYSKCGELH----IARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ LI+ YS+CG + R++ D G+ DL ++N ++AA A G ++ + +
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGV--TPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 242 MQELGFQANDVTYVELLTACSHA---GLVDE-GIQYFDKLLKNRSIQVKEDHYACLVDLC 297
M++ + N++TY LL A ++ GL+ + + +++ R++ +K LV +C
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK-----TLVLVC 604
Query: 298 GRAGRLKEA 306
+ L EA
Sbjct: 605 SKCDLLPEA 613
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 59/324 (18%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRM--------------------- 45
FN +QE DV S+T+++ A SGR +A +F +M
Sbjct: 196 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 255
Query: 46 ---PLRNVVS----------------WNAMITGYAQNRRLDEALELFERMP----ERDMA 82
P + S +N +IT + EA ++FE M D
Sbjct: 256 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 315
Query: 83 SWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKM 138
++NA+L + ++ A K+ E+ ++T+ S+++ YA+ G+ +EA+++ +M
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 139 QANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGE 198
A G KP+ T+ T+L + I + + G + N +A I MY G+
Sbjct: 376 -AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 199 LHIARKIFDD----GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTY 254
KIFD+ GL D+++WN ++A + +G +E +F +M+ GF T+
Sbjct: 435 FTEMMKIFDEINVCGL--SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 255 VELLTACSHAGLVDEGIQYFDKLL 278
L++A S G ++ + + ++L
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRML 516
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 170/383 (44%), Gaps = 50/383 (13%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALF-----DRMPLRNVVSWNAMITGYAQNRRLDEALEL 72
D S ++ L K GR+ A +F D L +V S+ ++I+ +A + R EA+ +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSL-DVYSYTSLISAFANSGRYREAVNV 230
Query: 73 FERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEAL 132
F++M E D + +IT+ ++ + + G +
Sbjct: 231 FKKM-EEDGC--------------------------KPTLITYNVILNVFGKMGTPWNKI 263
Query: 133 KMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINM 192
+ + G+ P+ T+ T++ C + E Q+ + + GF + +AL+++
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 193 YSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAN 250
Y K A K+ ++ +L ++++N +I+AYA G +EA+ L N+M E G + +
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 251 DVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYII 310
TY LL+ AG V+ + F++ ++N + + + + G G+ E I
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEE-MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 311 EGL---GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAG------TYSLLSN 361
+ + G+ + W LLA V G + V+ + K E + AG T++ L +
Sbjct: 443 DEINVCGLSPDIVTWNTLLA---VFGQNGMDSEVS-GVFK-EMKRAGFVPERETFNTLIS 497
Query: 362 MYASVGKWKEAANVRMKMKDKGL 384
Y+ G +++A V +M D G+
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGV 520
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 153/354 (43%), Gaps = 69/354 (19%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVV----SWNAMITGYAQNRRLDEALELF 73
D+ +W T++ ++G + +F M V ++N +I+ Y++ ++A+ ++
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 74 ERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQ- 124
RM + D++++N +L + G ++EK+ AE+ + + +T+ S++ YA
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 125 ------HGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQI-------- 170
H L+EE +G ++P T++ CS L E ++
Sbjct: 573 KEIGLMHSLAEEVY--------SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 171 -----------------HQLISKT----------GFQENTRVVSALINMYSKCGEL---- 199
Q+++K GF + ++L+ M+S+ +
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
I R+I G+ + D+IS+N +I AY + +A +F++M+ G + +TY +
Sbjct: 685 EILREILAKGI--KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL 313
+ + + +E I ++K+ + ++ Y +VD + R EA +E L
Sbjct: 743 SYAADSMFEEAIGVVRYMIKH-GCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 185 VVSALINMYSKCGELHIARKIF----DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFN 240
VV+ +I+M K G + A +F +DG D+ S+ +I+A+A+ G EA+N+F
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGF--SLDVYSYTSLISAFANSGRYREAVNVFK 232
Query: 241 KMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRA 300
KM+E G + +TY +L G I + +K+ I Y L+ C R
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRG 292
Query: 301 GRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNA----DIGKLVAKKILKVEHENA 353
+EA + E + G + LL +V+G + + K++ + +L +
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALL---DVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
TY+ L + YA G EA ++ +M +KG K
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 147/302 (48%), Gaps = 17/302 (5%)
Query: 19 VSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPE 78
S++ + L GRIDDAR L M +VVS+N ++ GY + + EA LF+ +
Sbjct: 343 TSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRA 402
Query: 79 RD----MASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLSEE 130
D + ++N ++ G ++G L A++L E+ + DVIT+T+++ G+ ++G
Sbjct: 403 GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 462
Query: 131 ALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIH-QLISKTGFQENTRVVSAL 189
A +++ +M G+KP+ + T L + ++H ++++ + + +
Sbjct: 463 ATEVYDEM-LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 190 INMYSKCGEL----HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
I+ K G L RKIF GL+ D +++ +I Y +G A NL+++M
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLV--PDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 246 GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKE 305
+ +TY L+ + AG +++ QY ++ K H A L +C +AG + E
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC-KAGNIDE 638
Query: 306 AF 307
A+
Sbjct: 639 AY 640
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/455 (20%), Positives = 183/455 (40%), Gaps = 93/455 (20%)
Query: 19 VSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRLDEALELFE 74
V ++ TM+D K+G ++ ++ M RN+ V++N +I G+++N +++EA
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 75 RMPERDMA----SWNAMLTGFFQN-----------------------------------G 95
M A S+N ++ G+ + G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 96 ELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVL 155
++ A +L + + DV+++ ++M GY + G EA +F ++A G + P+ T+ T++
Sbjct: 358 RIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRA-GDIHPSIVTYNTLI 416
Query: 156 GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDD------- 208
+L Q++ + ++ + + L+ + K G L +A +++D+
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 209 -----------GLLR--------------------QRDLISWNGMIAAYAHHGYGNEAIN 237
G LR DL +N I G +AI
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE 536
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
K+ +G + VTY ++ G +D++L+ R + Y L+
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR-LYPSVITYFVLIYGH 595
Query: 298 GRAGRLKEAFYI---IEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE--- 351
+AGRL++AF ++ GV+ ++ LL G GN D + + K+E E
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA---YRYLCKMEEEGIP 652
Query: 352 -NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
N +Y++L + KW+E + +M DK ++
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 186/442 (42%), Gaps = 84/442 (19%)
Query: 47 LRNVVSWNAMITGYAQNRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEK 102
L +V + N ++ +R +++A ++E M E + ++N ML F+ G+L R +K
Sbjct: 200 LPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 259
Query: 103 LFAELPQKDV----ITWTSMMTGYAQHGLSEEALKMFTKMQANG---------------- 142
++ E+ ++++ +T+ ++ G++++G EEA + M+ +G
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319
Query: 143 ------------------GLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTR 184
G+ P T+ + A + + + +L+S +
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR---ELLSSMAAPD--- 373
Query: 185 VVS--ALINMYSKCGELHIARKIFDDGLLRQRD----LISWNGMIAAYAHHGYGNEAINL 238
VVS L++ Y K G+ A +FDD LR D ++++N +I G A L
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDD--LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCG 298
+M + +TY L+ G + + +D++L+ +K D YA G
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK---GIKPDGYAYTTRAVG 488
Query: 299 --RAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVH--GNADIGKLVA-----KKILKVE 349
R G +AF + E + ++ P L NV G +G LV +KI +V
Sbjct: 489 ELRLGDSDKAFRLHEEM---VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545
Query: 350 H-ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWIEVGNTVQVFVVGDKS 408
+ TY+ + Y G++K A N + D+ L+K+ S I T V + G
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARN----LYDEMLRKRLYPSVI----TYFVLIYG--- 594
Query: 409 HSQSEMLEYLLLGLHTKMKKFG 430
H+++ LE T+MKK G
Sbjct: 595 HAKAGRLEQ-AFQYSTEMKKRG 615
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 30/269 (11%)
Query: 12 NQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRL----- 66
Q+ DV ++TT+V G K+G + A ++D M LR + + GYA R
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM-LRKGIKPD----GYAYTTRAVGELR 491
Query: 67 ----DEALELFERMPER-----DMASWNAMLTGFFQNGELNRA----EKLFAELPQKDVI 113
D+A L E M D+ +N + G + G L +A K+F D +
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
T+T+++ GY ++G + A ++ +M L P+ T+ ++ + L + Q
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEM-LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIAR----KIFDDGLLRQRDLISWNGMIAAYAHH 229
+ K G + N +AL+ K G + A K+ ++G+ + S+ +I+
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK--YSYTMLISKNCDF 668
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELL 258
E + L+ +M + + + T+ L
Sbjct: 669 EKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 175/386 (45%), Gaps = 24/386 (6%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
D ++TT++ GL + +A AL DRM R N+V++ ++ G + D AL L
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 74 ERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
+M E D+ +N ++ + ++ A LF E+ K +V+T++S+++ +
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G +A ++ + M + PN TF ++ A E ++++ + K +
Sbjct: 309 GRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 186 VSALINMYSKCGELHIARKIFDDGLLRQ--RDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
++L+N + L A+++F+ + + D++++N +I + + LF +M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED--HYACLVD-LC--G 298
G + VTY L+ H G D + F +++ + V D Y+ L+D LC G
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD---GVPPDIMTYSILLDGLCNNG 484
Query: 299 RAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKVEHENAGTYS 357
+ + E F ++ +KL + ++ ++ G G D G L LK N TY+
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 358 LLSNMYASVGKWKEAANVRMKMKDKG 383
+ + S +EA + KMK+ G
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 176/390 (45%), Gaps = 55/390 (14%)
Query: 11 FNQMQ----ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ 62
N+M+ E DV + T++D L K +DDA LF M + NVV+++++I+
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVIT 114
R +A +L M E+ ++ ++NA++ F + G+ AEKL+ ++ ++ D+ T
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+ S++ G+ H ++A +MF M + P+ T+ T++ + +G ++ + +
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNE 234
S G +T +++ +I H G +
Sbjct: 427 SHRGLVGDT---------------------------------VTYTTLIQGLFHDGDCDN 453
Query: 235 AINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLV 294
A +F +M G + +TY LL + G +++ ++ FD + K+ I++ Y ++
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IKLDIYIYTTMI 512
Query: 295 DLCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKVEH 350
+ +AG++ + + + L GVK ++ + +++G C+ + L+ K
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 351 ENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
N+GTY+ L + G +A + +M+
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/426 (19%), Positives = 189/426 (44%), Gaps = 37/426 (8%)
Query: 34 RIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMA----SWN 85
++DDA LF M PL ++V +N +++ A+ ++ D + L E+M ++ ++N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 86 AMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
++ F + +++ A L ++ + ++T +S++ GY +A+ + +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VE 183
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
G +P+ TF T++ +E + + + G Q N ++N K G+ +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 202 ARKIFD--DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
A + + + + D++ +N +I + + + ++A+NLF +M+ G + N VTY L++
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVK 316
G + Q +++ + I + L+D + G+ EA + + + +
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 317 LSLSVWGPLLAGCNVHGNADIGKLVAKKILKVE-HENAGTYSLLSNMYASVGKWKEAANV 375
+ + L+ G +H D K + + ++ + + TY+ L + + ++ +
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 376 RMKMKDKGLKKQPGCSWIEVGNTVQ-------VFVVGDKSHSQSEMLEYLLLGLHTKMKK 428
+M +GL VG+TV +F GD ++Q + + G+ +
Sbjct: 423 FREMSHRGL----------VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 429 FGDILD 434
+ +LD
Sbjct: 473 YSILLD 478
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 138/290 (47%), Gaps = 28/290 (9%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALE 71
E DV + T++DGL K +DDA LF++M + +V ++N +I+ R +A
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQ-----KDVITWTSMMTGY 122
L M E+ D+ +NA++ F + G+L AEKL+ E+ + DV+ + +++ G+
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
++ EE +++F +M + GL N T+ T++ Q + + + G +
Sbjct: 367 CKYKRVEEGMEVFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLRQR----DLISWNGMIAAYAHHGYGNEAINL 238
+ L++ G + A +F+ +++R D++++ MI A G + +L
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFE--YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED 288
F + G + N VTY +++ GL +E F +++KED
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF--------VEMKED 525
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 140/278 (50%), Gaps = 18/278 (6%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGYAQNRRLDEALE 71
+ D+ ++ +++GL K G D A L ++M +VV +N +I G + + +D+A +
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYA 123
LF +M + D+ ++N +++ G + A +L +++ +K D++ + +++ +
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
+ G EA K++ +M + P+ + T++ + EG ++ + +S+ G NT
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 184 RVVSALINMYSKCGELHIARKIF----DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLF 239
+ LI+ + + + A+ +F DG+ D++++N ++ ++G A+ +F
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGV--HPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
MQ+ + + VTY ++ A AG V++G F L
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 169/385 (43%), Gaps = 40/385 (10%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALE 71
+ D ++TT+V GL + + +A AL +RM ++ ++V++ A+I G + D AL
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 72 LFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEA 131
L +M + G++ + DV+ + +++ G ++ ++A
Sbjct: 237 LLNKM----------------EKGKI-----------EADVVIYNTIIDGLCKYKHMDDA 269
Query: 132 LKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALIN 191
+F KM+ G+KP+ T+ ++ ++ ++ + + + +ALI+
Sbjct: 270 FDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 192 MYSKCGELHIARKIFDDGLLRQR---DLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQ 248
+ K G+L A K++D+ + + D++++N +I + + E + +F +M + G
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 249 ANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFY 308
N VTY L+ A D F +++ + + Y L+D G ++ A
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 309 IIEGL---GVKLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKVEHENAGTYSLLSNMYA 364
+ E + +KL + + ++ G + G L LK N TY+ + + +
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 365 SVGKWKEAANVRMKMKDKGLKKQPG 389
G +EA + ++MK+ G G
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSG 532
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 94/166 (56%), Gaps = 21/166 (12%)
Query: 10 AFNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITG 59
F +M +R + ++TT++ G ++ D+A+ +F +M P +++++N ++ G
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP--DIMTYNILLDG 435
Query: 60 YAQNRRLDEALELFERMPERDM----ASWNAMLTGFFQNGELNRAEKLFAELPQK----D 111
N ++ AL +FE M +RDM ++ M+ + G++ LF L K +
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 112 VITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGA 157
V+T+T+MM+G+ + GL EEA +F +M+ +G L PN+GT+ T++ A
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRA 540
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/425 (18%), Positives = 168/425 (39%), Gaps = 69/425 (16%)
Query: 34 RIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMP----ERDMASWN 85
++DDA LF M P ++V ++ +++ A+ + D + L E+M ++ +++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 86 AMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
+ F + +L+ A + ++ + ++T S++ G+ EA+ + +M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM-VE 173
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
G +P+ TF T+ +H L E +V ++ C
Sbjct: 174 MGYQPDTVTFTTL---------------VHGLFQHNKASEAVALVERMV--VKGC----- 211
Query: 202 ARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTAC 261
Q DL+++ +I G + A+NL NKM++ +A+ V Y ++
Sbjct: 212 -----------QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 262 SHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLS 318
+D+ F+K ++ + I+ Y L+ GR +A ++ + +
Sbjct: 261 CKYKHMDDAFDLFNK-METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 319 LSVWGPLLAGCNVHGNADIGKLVAKKILKVEH--ENAGTYSLLSNMYASVGKWKEAANVR 376
L + L+ G + + +++K +H + Y+ L + + +E V
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 377 MKMKDKGLKKQPGCSWIEVGNTVQ-------VFVVGDKSHSQSEMLEYLLLGLHTKMKKF 429
+M +GL VGNTV F D ++Q + + G+H + +
Sbjct: 380 REMSQRGL----------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 430 GDILD 434
+LD
Sbjct: 430 NILLD 434
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 54/278 (19%)
Query: 12 NQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLD 67
N+ E+DV S+ T++D + K G++D A + +MP++ NVVS++ +I G+A+ R D
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 68 EALELFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMM 119
EAL LF M D S+N +L+ + + G A + E+ +KDV+T+ +++
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 120 TGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF 179
GY + G +E K+FT+M+ L PN T+
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVL-PNLLTY---------------------------- 517
Query: 180 QENTRVVSALINMYSKCGELHIARKIFDD----GLLRQRDLISWNGMIAAYAHHGYGNEA 235
S LI+ YSK G A +IF + GL + D++ ++ +I A +G A
Sbjct: 518 -------STLIDGYSKGGLYKEAMEIFREFKSAGL--RADVVLYSALIDALCKNGLVGSA 568
Query: 236 INLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQY 273
++L ++M + G N VTY ++ A + +D Y
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 151/313 (48%), Gaps = 15/313 (4%)
Query: 85 NAMLTGFFQNGELNRAEKLF----AELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQA 140
+AM++ + G++ A+++F A V ++++++ Y + GL EEA+ +F M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 141 NGGLKPNNGTFVTVLGAC-SGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGEL 199
G L+PN T+ V+ AC G + + + + G Q + ++L+ + S+ G
Sbjct: 297 YG-LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 200 HIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVEL 257
AR +FD+ R ++D+ S+N ++ A G + A + +M N V+Y +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 258 LTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIE---GLG 314
+ + AG DE + F ++ + I + Y L+ + + GR +EA I+ +G
Sbjct: 416 IDGFAKAGRFDEALNLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 315 VKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH--ENAGTYSLLSNMYASVGKWKEA 372
+K + + LL G G D K V + +K EH N TYS L + Y+ G +KEA
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTE-MKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 373 ANVRMKMKDKGLK 385
+ + K GL+
Sbjct: 534 MEIFREFKSAGLR 546
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 110/211 (52%), Gaps = 8/211 (3%)
Query: 181 ENTRVVSALINMYSKCGELHIARKIFDDGLL--RQRDLISWNGMIAAYAHHGYGNEAINL 238
E ++ SA+I+ + G++ IA++IF+ + +++ +I+AY G EAI++
Sbjct: 231 EQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISV 290
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGL-VDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
FN M+E G + N VTY ++ AC G+ + ++FD++ +N +Q + L+ +C
Sbjct: 291 FNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVC 349
Query: 298 GRAGRLKEAFYIIEGLG---VKLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKVEHENA 353
R G + A + + + ++ + + LL G D+ +++A+ +K N
Sbjct: 350 SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNV 409
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+YS + + +A G++ EA N+ +M+ G+
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 141/305 (46%), Gaps = 21/305 (6%)
Query: 23 TTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGYAQNRRLDEALELFERMPE 78
+ M+ L + G++ A+ +F+ V +++A+I+ Y ++ +EA+ +F M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 79 ----RDMASWNAMLTGFFQNG-ELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSE 129
++ ++NA++ + G E + K F E+ Q D IT+ S++ ++ GL E
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 130 EALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSAL 189
A +F +M N ++ + ++ T+L A + +I + N S +
Sbjct: 357 AARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 190 INMYSKCGELHIARKIFDDGLLR----QRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
I+ ++K G A +F G +R D +S+N +++ Y G EA+++ +M +
Sbjct: 416 IDGFAKAGRFDEALNLF--GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 246 GFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKE 305
G + + VTY LL G DE + F + +K + Y+ L+D + G KE
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTE-MKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 306 AFYII 310
A I
Sbjct: 533 AMEIF 537
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 132/263 (50%), Gaps = 21/263 (7%)
Query: 2 WEDRGCTMAFNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSW 53
W D + + M ER +V ++ ++D K G++ +A L+D M R ++ ++
Sbjct: 311 WSD--ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 54 NAMITGYAQNRRLDEALELFERMPERD----MASWNAMLTGFFQNGELNRAEKLFAELPQ 109
+++I G+ + RLDEA +FE M +D + ++N ++ GF + ++ +LF E+ Q
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 110 K----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLT 165
+ + +T+T+++ G+ Q + A +F +M ++G + PN T+ T+L L
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPNIMTYNTLLDGLCKNGKLE 487
Query: 166 EGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMI 223
+ + + + ++ + + +I K G++ +F L+ + D+I +N MI
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 224 AAYAHHGYGNEAINLFNKMQELG 246
+ + G EA LF KM+E G
Sbjct: 548 SGFCRKGLKEEADALFRKMREDG 570
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 186/388 (47%), Gaps = 20/388 (5%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQNRRLDEALE 71
E + + +++++G RI DA AL D+M + +++ +I G + + EA+
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYA 123
L +RM +R ++ ++ ++ G + G+++ A L ++ + +V+ +++++
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
++ ++AL +FT+M+ N G++PN T+ +++ ++ ++ + + N
Sbjct: 272 KYRHEDDALNLFTEME-NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQ--RDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ALI+ + K G+L A K++D+ + R D+ +++ +I + H +EA ++F
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAG 301
M N VTY L+ A +DEG++ F + + R + Y L+ +A
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE-MSQRGLVGNTVTYTTLIHGFFQAR 449
Query: 302 RLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHE-NAGTYS 357
A + + + GV ++ + LL G +G + +V + + + + E TY+
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 509
Query: 358 LLSNMYASVGKWKEAANVRMKMKDKGLK 385
++ GK ++ ++ + KG+K
Sbjct: 510 IMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 179/394 (45%), Gaps = 28/394 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
D ++TT++ GL + +A AL D+M R ++V++ ++ G + +D AL L
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 74 ERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
++M E D+ +N ++ G + ++ A LF E+ K DV T++S+++ +
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G +A ++ + M + PN TF ++ A L E ++++ + K +
Sbjct: 307 GRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 186 VSALINMYSKCGELHIARKIFDDGLLRQRD----LISWNGMIAAYAHHGYGNEAINLFNK 241
S+LIN + L A+ +F+ L+ +D +++++ +I + E + LF +
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFE--LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED--HYACLVDLCGR 299
M + G N VTY L+ A D F +++ S+ V + Y L+D +
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV---SVGVHPNILTYNILLDGLCK 480
Query: 300 AGRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKVEHENAGT 355
G+L +A + E L ++ + + ++ G G + G +L LK N
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 356 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPG 389
Y+ + + + G +EA ++ KMK+ G G
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 138/276 (50%), Gaps = 15/276 (5%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALE 71
E DV + T++DGL K +DDA LF M + +V +++++I+ R +A
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYA 123
L M ER ++ +++A++ F + G+L AEKL+ E+ ++ D+ T++S++ G+
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
H +EA MF M + PN T+ T++ + EG ++ + +S+ G NT
Sbjct: 375 MHDRLDEAKHMFELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 184 RVVSALINMYSKCGELHIARKIFDD--GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ LI+ + + + A+ +F + +++++N ++ +G +A+ +F
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
+Q + + TY ++ AG V++G + F L
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 188/427 (44%), Gaps = 39/427 (9%)
Query: 34 RIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMP----ERDMASWN 85
++DDA LF M P ++V +N +++ A+ + + + L E+M D+ +++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 86 AMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
+ F + +L+ A + A++ + D++T +S++ GY +A+ + +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM-VE 181
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
G KP+ TF T++ +E + + + G Q + ++N K G++ +
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 202 ARKIF---DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL 258
A + + G + + D++ +N +I + + ++A+NLF +M G + + TY L+
Sbjct: 242 ALSLLKKMEKGKI-EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GV 315
+ + G + + +++ R I ++ L+D + G+L EA + + + +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 316 KLSLSVWGPLLAGCNVHGNADIGK-LVAKKILKVEHENAGTYSLLSNMYASVGKWKEAAN 374
+ + L+ G +H D K + I K N TYS L + + +E
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 375 VRMKMKDKGLKKQPGCSWIEVGNTVQ-------VFVVGDKSHSQSEMLEYLLLGLHTKMK 427
+ +M +GL VGNTV F D ++Q + + +G+H +
Sbjct: 420 LFREMSQRGL----------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 428 KFGDILD 434
+ +LD
Sbjct: 470 TYNILLD 476
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 144/282 (51%), Gaps = 26/282 (9%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQ 62
+++M +R D+ +++++++G R+D+A+ +F+ M NVV+++ +I G+ +
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAEL----PQKDVIT 114
+R++E +ELF M +R + ++ ++ GFFQ + + A+ +F ++ +++T
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF-VTVLGACSGLASLTEGQQIHQL 173
+ ++ G ++G +A+ +F +Q ++P+ T+ + + G C + +G ++
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQ-RSTMEPDIYTYNIMIEGMCKA-GKVEDGWELFCN 528
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIA----RKIFDDGLLRQRDLISWNGMIAAYAHH 229
+S G N + +I+ + + G A +K+ +DG L ++N +I A
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG--TYNTLIRARLRD 586
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGI 271
G + L +M+ GF A D + + L+T H G +D+
Sbjct: 587 GDREASAELIKEMRSCGF-AGDASTIGLVTNMLHDGRLDKSF 627
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 177/390 (45%), Gaps = 22/390 (5%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRM-----PLRNVVSWNAMITGYAQNRRLDEAL 70
E + ++++++DG K G + AL++ M P +VV + ++ G ++ + A+
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP-PDVVIYGVLVDGLSKQGLMLHAM 481
Query: 71 ELFERM----PERDMASWNAMLTGFFQNGELNRAEKLFAEL----PQKDVITWTSMMTGY 122
+M ++ +N+++ G+ + + A K+F + + DV T+T++M
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 123 AQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
G EEAL +F +M GL+P+ + T++ A T G Q+ L+ + +
Sbjct: 542 IMEGRLEEALFLFFRM-FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGL--LRQRDLISWNGMIAAYAHHGYGNEAINLFN 240
V + +I++ KC + A K F++ + + D++++N MI Y +EA +F
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 241 KMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRA 300
++ F N VT L+ +D I+ F ++ + + Y CL+D ++
Sbjct: 661 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 301 GRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH-ENAGTY 356
++ +F + E + G+ S+ + ++ G G D + + + + + Y
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 779
Query: 357 SLLSNMYASVGKWKEAANVRMKMKDKGLKK 386
++L Y VG+ EAA + M G+K
Sbjct: 780 AILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 129/279 (46%), Gaps = 12/279 (4%)
Query: 41 LFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMPER----DMASWNAMLTGFFQNGE 96
+ D P NVV++ +I G+ + +D A +LF+ M +R D+ +++ ++ G+F+ G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 97 LNRAEKLFAELPQK----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFV 152
L KLF++ K DV+ ++S + Y + G A ++ +M G+ PN T+
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISPNVVTYT 395
Query: 153 TVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLL- 211
++ + E ++ I K G + + S+LI+ + KCG L +++D +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 212 -RQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEG 270
D++ + ++ + G A+ KM + N V + L+ DE
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 271 IQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYI 309
++ F +L+ I+ + ++ + GRL+EA ++
Sbjct: 516 LKVF-RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFL 553
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 29/236 (12%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGY 60
F+ MQ D++ ++ L K RI+DA F+ + P ++V++N MI GY
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP--DIVTYNTMICGY 646
Query: 61 AQNRRLDEALELFERMPERDMASWNAMLTGFF----QNGELNRAEKLFAELPQK----DV 112
RRLDEA +FE + LT +N +++ A ++F+ + +K +
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 113 ITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQ 172
+T+ +M +++ E + K+F +MQ G+ P+ ++ ++ + E I
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFH 765
Query: 173 LISKTGFQENTRVVSALINMYSKCGEL--------HIARKIFDDGLLRQRDLISWN 220
+ + LI Y K G L H+ R L QR L +N
Sbjct: 766 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYN 821
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 126 GLSEEALKMFTKMQA---NGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQEN 182
GLS + +++ +++ + + G PN TF T++ + + +++ + G + +
Sbjct: 261 GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320
Query: 183 TRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFN 240
S LI+ Y K G L + K+F L + + D++ ++ I Y G A ++
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Query: 241 KMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRA 300
+M G N VTY L+ G + E + ++LK R ++ Y+ L+D +
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKC 439
Query: 301 GRLKEAFYIIEG---LGVKLSLSVWGPLLAGCNVHG 333
G L+ F + E +G + ++G L+ G + G
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 137/276 (49%), Gaps = 15/276 (5%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALE 71
E +V + T++DGL K+G ++ A L + M + +VV++N ++TG + R +A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDV----ITWTSMMTGYA 123
+ M +R D+ ++ A++ F + G L+ A++L+ E+ Q V +T+ S++ G
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
HG +A K F M A+ G PN T+ T++ + EG ++ Q +S GF +
Sbjct: 293 MHGRLYDAKKTFDLM-ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQ--RDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ LI+ Y + G+L +A IF + R+ D+I+ ++ +G A+ F+
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 242 MQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
M+E V Y ++ A V++ + F +L
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 178/394 (45%), Gaps = 32/394 (8%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEALE 71
D+ S+T ++ + R+ A ++ +M P ++V++ +++ G+ R+ +A
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEP--SIVTFGSLLHGFCLVNRIGDAFS 162
Query: 72 LFERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYA 123
L M E ++ +N ++ G +NGELN A +L E+ +K DV+T+ +++TG
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
G +A +M M + P+ TF ++ +L E Q++++ + ++ N
Sbjct: 223 YSGRWSDAARMLRDMMKRS-INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQR----DLISWNGMIAAYAHHGYGNEAINLF 239
+++IN G L+ A+K FD L+ + +++++N +I+ + +E + LF
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFD--LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGR 299
+M GF A+ TY L+ G + + F ++ R H L LC
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 300 AGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADIGK------LVAKKILKVEHENA 353
G ++ A + + + S G + +HG K L + ++ +A
Sbjct: 400 -GEIESALVKFDDM--RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 354 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQ 387
TY+++ G +EA + +MK++G+ Q
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGIICQ 490
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 113/283 (39%), Gaps = 66/283 (23%)
Query: 28 GLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMPERDMAS 83
G S R +DA ALF M PL ++V + ++T A RR + + ++M
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKME------ 98
Query: 84 WNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQANGG 143
L G D+ ++T ++ + + AL + KM G
Sbjct: 99 ----LYGI-----------------SHDLYSFTILIHCFCRCSRLSFALSVLGKMM-KLG 136
Query: 144 LKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIAR 203
+P+ TF ++L + + + + L+ K+G++ N V + LI+ K GEL+I
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI-- 194
Query: 204 KIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSH 263
A+ L N+M++ G A+ VTY LLT +
Sbjct: 195 -------------------------------ALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 264 AGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEA 306
+G + + ++K RSI + L+D+ + G L EA
Sbjct: 224 SGRWSDAARMLRDMMK-RSINPDVVTFTALIDVFVKQGNLDEA 265
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 173/396 (43%), Gaps = 59/396 (14%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ 62
+M+ER D ++ ++DGL K G +D+A LF+ M ++ N++++N +I G+
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVIT 114
R D+ +L M +R ++ +++ ++ F + G+L AE+L E+ + D IT
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+TS++ G+ + L + Q+ L+
Sbjct: 371 YTSLIDGFCKEN------------------------------------HLDKANQMVDLM 394
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYG 232
G N R + LIN Y K + ++F LR D +++N +I + G
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 233 NEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYAC 292
N A LF +M N VTY LL G ++ ++ F+K+ K++ +++ Y
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK-MELDIGIYNI 513
Query: 293 LVDLCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVE 349
++ A ++ +A+ + L GVK + + ++ G G +L+ +K+ +
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 350 HENAG-TYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
H G TY++L + G ++ + ++K G
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGF 609
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 179/399 (44%), Gaps = 27/399 (6%)
Query: 7 CTMAFNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQ 62
C F+ +R++S + GL + DDA LF M PL V+ ++ + + A+
Sbjct: 42 CERGFSAFSDRNLSYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAK 100
Query: 63 NRRLDEALELFERMPERDMA----SWNAMLTGFFQNGELNRAEKLFAELP----QKDVIT 114
++ D L L ++M + +A + + M+ F + +L A ++ + + IT
Sbjct: 101 TKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTIT 160
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+++++ G G EAL++ +M G KP+ +T+ +GL + + LI
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRM-VEMGHKPD---LITINTLVNGLCLSGKEAEAMLLI 216
Query: 175 SKT---GFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHH 229
K G Q N ++N+ K G+ +A ++ R + D + ++ +I H
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDH 289
G + A NLFN+M+ G N +TY L+ +AG D+G + ++K R I
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK-RKINPNVVT 335
Query: 290 YACLVDLCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKI 345
++ L+D + G+L+EA + + + G+ + L+ G C + ++V +
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 346 LKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
K N T+++L N Y + + + KM +G+
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 151/316 (47%), Gaps = 24/316 (7%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQ 62
+M+ER DV +++T++D L + G ID A +LF M + +VV++N+++ G +
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 63 NRRLDEALELFERMPERDMA----SWNAMLTGFFQNGELNRAEKLFAELPQK----DVIT 114
+ ++ L + M R++ ++N +L F + G+L A +L+ E+ + ++IT
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLI 174
+ ++M GY EA M M N P+ TF +++ + + +G ++ + I
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 175 SKTGFQENTRVVSALINMYSKCGELHIARKIFDD----GLLRQRDLISWNGMIAAYAHHG 230
SK G N S L+ + + G++ +A ++F + G+L D++++ ++ +G
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL--PDVMTYGILLDGLCDNG 452
Query: 231 YGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
+A+ +F +Q+ V Y ++ G V++ F L + ++ Y
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS-LPCKGVKPNVMTY 511
Query: 291 ACLVDLCGRAGRLKEA 306
++ + G L EA
Sbjct: 512 TVMISGLCKKGSLSEA 527
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 175/389 (44%), Gaps = 26/389 (6%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEA 69
E D +++ T++ GL G++ +A L DRM P +VV++N+++ G ++ A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP--DVVTYNSIVNGICRSGDTSLA 212
Query: 70 LELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTG 121
L+L +M ER D+ +++ ++ ++G ++ A LF E+ K V+T+ S++ G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
+ G + + M + + PN TF +L L E ++++ + G
Sbjct: 273 LCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQR---DLISWNGMIAAYAHHGYGNEAINL 238
N + L++ Y L A + D ++R + D++++ +I Y ++ + +
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML-DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCG 298
F + + G AN VTY L+ +G + + F +++ + + Y L+D
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH-GVLPDVMTYGILLDGLC 449
Query: 299 RAGRLKEAFYIIEGL---GVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKVEHENAG 354
G+L++A I E L + L + ++ ++ G C D L K N
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 355 TYSLLSNMYASVGKWKEAANVRMKMKDKG 383
TY+++ + G EA + KM++ G
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 21 SWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQNRRLDEALELFERM 76
+++ +V G +SG+I A LF M L +V+++ ++ G N +L++ALE+FE +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 77 PERDM----ASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLS 128
+ M + ++ G + G++ A LF LP K +V+T+T M++G + G
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
EA + KM+ +G PN+ T+ T++ A LT ++ + + GF + +
Sbjct: 525 SEANILLRKMEEDGN-APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 583
Query: 189 LINMYSKCGELHIARKIFDDGLLRQRDLISWNG 221
+I+M + R G ++DL+ +G
Sbjct: 584 VIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSG 616
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
+V ++ ++D K G++ +A L+ M R N++++N ++ GY RL EA +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
+ M D+ ++ +++ G+ ++ K+F + ++ + +T++ ++ G+ Q
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G + A ++F +M ++G L P+ T+ +L L + +I + + K+ +
Sbjct: 417 GKIKLAEELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 186 VSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
+ +I K G++ A +F + + +++++ MI+ G +EA L KM+
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 244 ELGFQANDVTYVELLTA 260
E G ND TY L+ A
Sbjct: 536 EDGNAPNDCTYNTLIRA 552
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 181/385 (47%), Gaps = 35/385 (9%)
Query: 29 LAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQN-RRLDEALELFERMPER---- 79
L G + +AR +F++M + +V S N +T +++ + A+ +F PE
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLSEEALKMF 135
++AS+N ++ Q G + A L + K DVI++++++ GY + G ++ K+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 136 TKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSK 195
M+ G LKPN+ + +++G + L E ++ + + G +T V + LI+ + K
Sbjct: 305 EVMKRKG-LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 196 CGELHIARKIFDDGLLRQ--RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVT 253
G++ A K F + R D++++ +I+ + G EA LF++M G + + VT
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 254 YVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIE-- 311
+ EL+ AG + + + + +++ Y L+D + G L A ++
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 312 -GLGVKLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKVEHENAG------TYSLLSNMY 363
+G++ ++ + ++ G GN + KLV E E AG TY+ L + Y
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG------EFEAAGLNADTVTYTTLMDAY 536
Query: 364 ASVGKWKEAANVRMKMKDKGLKKQP 388
G+ +A + +M KGL QP
Sbjct: 537 CKSGEMDKAQEILKEMLGKGL--QP 559
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 160/341 (46%), Gaps = 25/341 (7%)
Query: 10 AFNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYA 61
AF++M + D +TT++DG K G I A F M R +V+++ A+I+G+
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 62 QNRRLDEALELFERM----PERDMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVI 113
Q + EA +LF M E D ++ ++ G+ + G + A ++ + Q +V+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
T+T+++ G + G + A ++ +M GL+PN T+ +++ ++ E ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMW-KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGY 231
G +T + L++ Y K GE+ A++I + L + Q ++++N ++ + HG
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 232 GNEAINLFNKMQELGFQANDVTYVELLTA-CSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
+ L N M G N T+ L+ C L Y D + +R + Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD--MCSRGVGPDGKTY 634
Query: 291 ACLVDLCGRAGRLKEAFYIIE---GLGVKLSLSVWGPLLAG 328
LV +A +KEA+++ + G G +S+S + L+ G
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 178/423 (42%), Gaps = 61/423 (14%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
DV S++T+V+G + G +D L + M + N + ++I + +L EA E F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKD----VITWTSMMTGYAQH 125
M + D + ++ GF + G++ A K F E+ +D V+T+T++++G+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G EA K+F +M G L+P++ TF ++ + + ++H + + G N
Sbjct: 400 GDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 186 VSALINMYSKCGELHIARKIFDD----GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ LI+ K G+L A ++ + GL Q ++ ++N ++ G EA+ L +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGL--QPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 242 MQELGFQANDVTYVELLTA------------------------------------CSHAG 265
+ G A+ VTY L+ A C H G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH-G 575
Query: 266 LVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLSLSVW 322
++++G + + +L + I + LV LK A I + + GV +
Sbjct: 576 MLEDGEKLLNWMLA-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 323 GPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKD 381
L+ G C + L + K + TYS+L + K+ EA V +M+
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 382 KGL 384
+GL
Sbjct: 695 EGL 697
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 122/249 (48%), Gaps = 19/249 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEALE 71
+V ++TT++DGL K G +D A L M P N+ ++N+++ G ++ ++EA++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP--NIFTYNSIVNGLCKSGNIEEAVK 512
Query: 72 L---FERMP-ERDMASWNAMLTGFFQNGELNRAEKLFAEL----PQKDVITWTSMMTGYA 123
L FE D ++ ++ + ++GE+++A+++ E+ Q ++T+ +M G+
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
HG+ E+ K+ M A G+ PN TF +++ +L I++ + G +
Sbjct: 573 LHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 184 RVVSALINMYSKCGELHIARKIFDD--GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ L+ + K + A +F + G + +++ +I + EA +F++
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 242 MQELGFQAN 250
M+ G A+
Sbjct: 692 MRREGLAAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 181/385 (47%), Gaps = 35/385 (9%)
Query: 29 LAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQN-RRLDEALELFERMPER---- 79
L G + +AR +F++M + +V S N +T +++ + A+ +F PE
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLSEEALKMF 135
++AS+N ++ Q G + A L + K DVI++++++ GY + G ++ K+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 136 TKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSK 195
M+ G LKPN+ + +++G + L E ++ + + G +T V + LI+ + K
Sbjct: 305 EVMKRKG-LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 196 CGELHIARKIFDDGLLRQ--RDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVT 253
G++ A K F + R D++++ +I+ + G EA LF++M G + + VT
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 254 YVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIE-- 311
+ EL+ AG + + + + +++ Y L+D + G L A ++
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 312 -GLGVKLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKVEHENAG------TYSLLSNMY 363
+G++ ++ + ++ G GN + KLV E E AG TY+ L + Y
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG------EFEAAGLNADTVTYTTLMDAY 536
Query: 364 ASVGKWKEAANVRMKMKDKGLKKQP 388
G+ +A + +M KGL QP
Sbjct: 537 CKSGEMDKAQEILKEMLGKGL--QP 559
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 160/341 (46%), Gaps = 25/341 (7%)
Query: 10 AFNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYA 61
AF++M + D +TT++DG K G I A F M R +V+++ A+I+G+
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 62 QNRRLDEALELFERM----PERDMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVI 113
Q + EA +LF M E D ++ ++ G+ + G + A ++ + Q +V+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 114 TWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQL 173
T+T+++ G + G + A ++ +M GL+PN T+ +++ ++ E ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMW-KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGY 231
G +T + L++ Y K GE+ A++I + L + Q ++++N ++ + HG
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 232 GNEAINLFNKMQELGFQANDVTYVELLTA-CSHAGLVDEGIQYFDKLLKNRSIQVKEDHY 290
+ L N M G N T+ L+ C L Y D + +R + Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD--MCSRGVGPDGKTY 634
Query: 291 ACLVDLCGRAGRLKEAFYIIE---GLGVKLSLSVWGPLLAG 328
LV +A +KEA+++ + G G +S+S + L+ G
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 178/423 (42%), Gaps = 61/423 (14%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
DV S++T+V+G + G +D L + M + N + ++I + +L EA E F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 74 ERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKD----VITWTSMMTGYAQH 125
M + D + ++ GF + G++ A K F E+ +D V+T+T++++G+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G EA K+F +M G L+P++ TF ++ + + ++H + + G N
Sbjct: 400 GDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 186 VSALINMYSKCGELHIARKIFDD----GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ LI+ K G+L A ++ + GL Q ++ ++N ++ G EA+ L +
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGL--QPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 242 MQELGFQANDVTYVELLTA------------------------------------CSHAG 265
+ G A+ VTY L+ A C H G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH-G 575
Query: 266 LVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLSLSVW 322
++++G + + +L + I + LV LK A I + + GV +
Sbjct: 576 MLEDGEKLLNWMLA-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 323 GPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKD 381
L+ G C + L + K + TYS+L + K+ EA V +M+
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 382 KGL 384
+GL
Sbjct: 695 EGL 697
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 122/249 (48%), Gaps = 19/249 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEALE 71
+V ++TT++DGL K G +D A L M P N+ ++N+++ G ++ ++EA++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP--NIFTYNSIVNGLCKSGNIEEAVK 512
Query: 72 L---FERMP-ERDMASWNAMLTGFFQNGELNRAEKLFAEL----PQKDVITWTSMMTGYA 123
L FE D ++ ++ + ++GE+++A+++ E+ Q ++T+ +M G+
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
HG+ E+ K+ M A G+ PN TF +++ +L I++ + G +
Sbjct: 573 LHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 184 RVVSALINMYSKCGELHIARKIFDD--GLLRQRDLISWNGMIAAYAHHGYGNEAINLFNK 241
+ L+ + K + A +F + G + +++ +I + EA +F++
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 242 MQELGFQAN 250
M+ G A+
Sbjct: 692 MRREGLAAD 700
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 145/309 (46%), Gaps = 18/309 (5%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFERMP 77
DV ++TT+++GL GR+ A AL DRM + +I G + + AL L +M
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 78 ERDMAS----WNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGL-- 127
E + + +NA++ ++G A+ LF E+ K DVIT++ M+ + + G
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 128 -SEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV 186
+E+ L+ + Q N P+ TF ++ A ++E ++I+ + + G T
Sbjct: 129 DAEQLLRDMIERQIN----PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 187 SALINMYSKCGELHIARKIFDDGLLR--QRDLISWNGMIAAYAHHGYGNEAINLFNKMQE 244
+++I+ + K L+ A+++ D + D+++++ +I Y + + +F +M
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 245 LGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLK 304
G AN VTY L+ G +D + ++ + + L LC + L+
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK-ELR 303
Query: 305 EAFYIIEGL 313
+AF I+E L
Sbjct: 304 KAFAILEDL 312
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 28/289 (9%)
Query: 158 CSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI 217
C +L + +H+ I + +A+I MYS C + A K+F++ +
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEE-------MP 181
Query: 218 SWNG-----MIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQ 272
WN M+ + ++GYG EAI+LF + +E G + N + ++ + C+ G V EG
Sbjct: 182 EWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSL 241
Query: 273 YFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVH 332
F + + I +HY + + +G L EA +E + ++ S+ VW L+ VH
Sbjct: 242 QFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVH 301
Query: 333 GNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSW 392
G+ ++G A+ + K++ + K A V K D +KK+P S
Sbjct: 302 GDVELGDRCAELVEKLDA-------------TRLDKVSSAGLVATKASD-FVKKEP--ST 345
Query: 393 IEVGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFGDILDDDLSRDV 441
F D SH Q ++ L+ L +++K+ G + D R +
Sbjct: 346 RSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSL 394
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 168/412 (40%), Gaps = 59/412 (14%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRN----VVSWNAMITGYAQNRRLD---- 67
+ DV ++ +++G K RIDDA + DRM ++ V++N MI +LD
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 68 -------------------------------EALELFERMPER----DMASWNAMLTGFF 92
EAL+L + M R DM ++N ++ G
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 93 QNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNN 148
+ G ++RA ++ L K DVI++ ++ G EE K+ TKM + PN
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK-CDPNV 333
Query: 149 GTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIA----RK 204
T+ ++ + E + +L+ + G + LI + + G L +A
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 205 IFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHA 264
+ DG L D++++N ++A +G ++A+ +F K+ E+G N +Y + +A +
Sbjct: 394 MISDGCLP--DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYII---EGLGVKLSLSV 321
G + +++ N I E Y ++ R G + EAF ++ S+
Sbjct: 452 GDKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 322 WGPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEA 372
+ +L G C H D ++ + N TY++L G EA
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 140/310 (45%), Gaps = 15/310 (4%)
Query: 18 DVSSWTTMVDGLAKSGRIDDA---RALFDRMPLRNVVSWNAMITGYAQNRRLDEALELFE 74
DV T ++ G I A + ++ +V ++NA+I G+ + R+D+A + +
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLD 182
Query: 75 RMPERDMA----SWNAMLTGFFQNGELNRAEKLFAEL----PQKDVITWTSMMTGYAQHG 126
RM +D + ++N M+ G+L+ A K+ +L Q VIT+T ++ G
Sbjct: 183 RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEG 242
Query: 127 LSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVV 186
+EALK+ +M + G LKP+ T+ T++ + ++ + + G + +
Sbjct: 243 GVDEALKLMDEMLSRG-LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 187 SALINMYSKCGELHIARKIFDDGLLRQRD--LISWNGMIAAYAHHGYGNEAINLFNKMQE 244
+ L+ G+ K+ + D +++++ +I G EA+NL M+E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 245 LGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLK 304
G + +Y L+ A G +D I++ + ++ + + ++ L LC + G+
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC-KNGKAD 420
Query: 305 EAFYIIEGLG 314
+A I LG
Sbjct: 421 QALEIFGKLG 430
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 137/286 (47%), Gaps = 21/286 (7%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEA 69
E DV S+ ++ L G+ ++ L +M P NVV+++ +IT ++ +++EA
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP--NVVTYSILITTLCRDGKIEEA 352
Query: 70 LELFERMPER----DMASWNAMLTGFFQNGELNRA----EKLFAELPQKDVITWTSMMTG 121
+ L + M E+ D S++ ++ F + G L+ A E + ++ D++ + +++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGAC-SGLASLTEGQQIHQLISKTGFQ 180
++G +++AL++F K+ G PN+ ++ T+ A S + I +++S G
Sbjct: 413 LCKNGKADQALEIFGKL-GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN-GID 470
Query: 181 ENTRVVSALINMYSKCGELHIARKIFDD--GLLRQRDLISWNGMIAAYAHHGYGNEAINL 238
+ +++I+ + G + A ++ D ++++N ++ + +AIN+
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQ 284
M G + N+ TY L+ AG E ++ + L++ +I
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 12/232 (5%)
Query: 161 LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDL---- 216
L ++ + ++ +++ K G Q + +ALIN + K + A ++ D +R +D
Sbjct: 137 LRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDR--MRSKDFSPDT 193
Query: 217 ISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDK 276
+++N MI + G + A+ + N++ Q +TY L+ A G VDE ++ D+
Sbjct: 194 VTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDE 253
Query: 277 LLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHG 333
+L +R ++ Y ++ + G + AF ++ L G + + + LL G
Sbjct: 254 ML-SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 334 NADIG-KLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 384
+ G KL+ K + N TYS+L GK +EA N+ MK+KGL
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 180/396 (45%), Gaps = 34/396 (8%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRN----VVSWNAMITGYAQNRRLDEALE 71
E D+ +T+++ G G +D +ALFD + R +++N +I G+ + +L EA E
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKD----VITWTSMMTGYA 123
+FE M ER ++ ++ ++ G G+ A +L + +KD +T+ ++
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
+ GL +A+++ M+ +P+N T+ +LG L E ++ L+ K +
Sbjct: 364 KDGLVADAVEIVELMKKRRT-RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 184 RVVS--ALINMYSKCGELHIARKIFDDGLLRQR----DLISWNGMIAAYAHHGYGNEAIN 237
V+S ALI+ K LH A I+D LL ++ D ++ N ++ + G N+A+
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYD--LLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
L+ ++ + N TY ++ G+++ K+ + +Q Y CL+
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM-RVSELQPSVFDYNCLLSSL 539
Query: 298 GRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNV--HGNADIGKLVAKKILKVEHENAG- 354
+ G L +A+ + E + + P + N+ G+ G + + + L V AG
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNF----PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL 595
Query: 355 -----TYSLLSNMYASVGKWKEAANVRMKMKDKGLK 385
TYS L N + +G EA + KM D G +
Sbjct: 596 SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 141/289 (48%), Gaps = 23/289 (7%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRM--------PLRNVVSWNAMITGYAQNRRLDEA 69
D ++ ++ GL G +D+A L M P +V+S+NA+I G + RL +A
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP--DVISYNALIHGLCKENRLHQA 443
Query: 70 LELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVI----TWTSMMTG 121
L++++ + E+ D + N +L + G++N+A +L+ ++ ++ T+T+M+ G
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
+ + G+ A + KM+ + L+P+ + +L + SL + ++ + + +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSE-LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLR---QRDLISWNGMIAAYAHHGYGNEAINL 238
+ + +I+ K G++ A + G+ R DL +++ +I + GY +EAI+
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLV-GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 239 FNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKE 287
F+KM + GF+ + +L C G D+ + KL+ + KE
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKE 670
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 147/320 (45%), Gaps = 22/320 (6%)
Query: 21 SWTTMVDGLAKSGRIDDARALFDRMPL----RNVVSWNAMITGYAQNRRLDEALELFERM 76
+W ++D K+G++D+A M ++V + ++I G+ LD LF+ +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 77 PERDMA----SWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQHGLS 128
ER + ++N ++ GF + G+L A ++F + ++ +V T+T ++ G G +
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 129 EEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSA 188
+EAL++ M +PN T+ ++ + + +I +L+ K + + +
Sbjct: 334 KEALQLLNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 189 LINMYSKCGELHIARKIF----DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQE 244
L+ G+L A K+ D D+IS+N +I ++A+++++ + E
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 245 LGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLK 304
+ VT LL + AG V++ ++ + K + + I D Y ++D + G L
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELW-KQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 305 EAFYIIEGLGVKLSLSVWGP 324
A +GL K+ +S P
Sbjct: 512 VA----KGLLCKMRVSELQP 527
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 123/269 (45%), Gaps = 14/269 (5%)
Query: 49 NVVSWNAMITGYAQNRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLF 104
NV + N ++ G +N +A+ L M D+ S+N ++ GF + EL +A +L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 105 AELPQK----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSG 160
E+ ++TW ++ + + G +EA+ +M+ G L+ + + +++
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG-LEADLVVYTSLIRGFCD 259
Query: 161 LASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLR--QRDLIS 218
L G+ + + + G + LI + K G+L A +IF+ + R + ++ +
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
+ G+I G EA+ L N M E + N VTY ++ GLV + ++ + L+
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE-LM 378
Query: 279 KNRSIQVKEDHYACLV-DLCGRAGRLKEA 306
K R + Y L+ LC + G L EA
Sbjct: 379 KKRRTRPDNITYNILLGGLCAK-GDLDEA 406
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 16/172 (9%)
Query: 17 RDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALEL 72
R+ ++T M+DG K+G ++ A+ L +M + +V +N +++ + LD+A L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 73 FERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQ 124
FE M D+ S+N M+ G + G++ AE L + + D+ T++ ++ + +
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 125 HGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISK 176
G +EA+ F KM + G +P+ +VL C S E ++ +L+ K
Sbjct: 612 LGYLDEAISFFDKM-VDSGFEPDAHICDSVLKYC---ISQGETDKLTELVKK 659
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 216 LISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFD 275
L++W +I A+ G +EA+ +M+ +G +A+ V Y L+ G +D G FD
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 276 KLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAG-CNV 331
++L+ + + C + G+LKEA I E + GV+ ++ + L+ G C V
Sbjct: 272 EVLERGDSPCAITYNTLIRGFC-KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 332 HGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 382
+ +L+ I K E NA TY+++ N G +A + MK +
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 129/255 (50%), Gaps = 14/255 (5%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLRNV----VSWNAMITGYAQNRRLDEALELF 73
+V ++ ++D K G++ +A L + M R++ +++N +I G+ + RLDEA ++F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 74 ERMPERD----MASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
+ M +D + ++N ++ GF + + +LF E+ Q+ + +T+T+++ G+ Q
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
G + A +F +M +N + + T+ +L L I + + K+ + N +
Sbjct: 447 GDCDSAQMVFKQMVSNR-VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 186 VSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQEL 245
+ +I K G++ A +F L + D++++N MI+ EA +LF KM+E
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFC-SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 246 GFQANDVTYVELLTA 260
G N TY L+ A
Sbjct: 565 GTLPNSGTYNTLIRA 579
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 184/429 (42%), Gaps = 62/429 (14%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEA 69
E D+ + +++++G S RI DA AL D+M P + ++ +I G + + EA
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP--DTFTFTTLIHGLFLHNKASEA 207
Query: 70 LELFERMPER----DMASWNAMLTGFFQNGE----LNRAEKLFAELPQKDVITWTSMMTG 121
+ L ++M +R D+ ++ ++ G + G+ LN K+ A + +V+ + +++
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
++ E A+ +FT+M+ G ++PN T+ +++ ++ ++ + +
Sbjct: 268 LCKYRHVEVAVDLFTEMETKG-IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQ--RDLISWNGMIAAYAHHGYGNEA---- 235
N +ALI+ + K G+L A K+ ++ + R D I++N +I + H +EA
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 236 -------------------------------INLFNKMQELGFQANDVTYVELLTACSHA 264
+ LF +M + G N VTY ++ A
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 265 GLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLG---VKLSLSV 321
G D F +++ NR + L LC G+L A I + L ++L++ +
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY-GKLDTALVIFKYLQKSEMELNIFI 505
Query: 322 WGPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMK 380
+ ++ G C + L +K + TY+ + + S +EA ++ KMK
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMK 562
Query: 381 DKGLKKQPG 389
+ G G
Sbjct: 563 EDGTLPNSG 571
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 172/384 (44%), Gaps = 30/384 (7%)
Query: 34 RIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMP----ERDMASWN 85
++DDA LF M P ++V +N +++ A+ + + + L E+M D+ +++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 86 AMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
+ F + +L+ A + A++ + D++T +S++ GY +A+ + +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM-VE 181
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
G KP+ TF T++ +E + + + G Q + ++N K G++ +
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 202 ARKIFD--DGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
A + + + + +++ +N +I + + + A++LF +M+ G + N VTY L+
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 260 ACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GVK 316
+ G + + +L+ + I + L+D + G+L EA + E + +
Sbjct: 302 CLCNYGRWSDASRLLSNMLE-KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 317 LSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEH-ENAGTYSLLSNMYASVGKWKEAANV 375
+ L+ G +H D K + K ++ + N TY+ L N + + ++ +
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 376 RMKMKDKGLKKQPGCSWIEVGNTV 399
+M +GL VGNTV
Sbjct: 421 FREMSQRGL----------VGNTV 434
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 132/266 (49%), Gaps = 15/266 (5%)
Query: 18 DVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALELF 73
+V ++T +V+GL S R DA L M + NV++++A++ + +N ++ EA ELF
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 74 ERMP----ERDMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYAQH 125
E M + D+ ++++++ G + ++ A ++F + K DV+++ +++ G+ +
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 126 GLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRV 185
E+ +K+F +M + GL N T+ T++ + + Q+ + G +
Sbjct: 344 KRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 186 VSALINMYSKCGELHIARKIFDDGLLRQRDL--ISWNGMIAAYAHHGYGNEAINLFNKMQ 243
+ L+ GEL A IF+D R+ DL +++ +I G EA +LF +
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 244 ELGFQANDVTYVELLTACSHAGLVDE 269
G + + VTY +++ GL+ E
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHE 488
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 119/250 (47%), Gaps = 46/250 (18%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMP----LRNVVSWNAMITGYAQNRRLDEALE 71
+ D+ +++++++GL RID+A +FD M L +VVS+N +I G+ + +R+++ ++
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 72 LFERMPERDMAS----WNAMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYA 123
LF M +R + S +N ++ GFFQ G++++A++ F+++ D+ T+ ++ G
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
+G E+AL +F MQ + + T+ TV+ + E + +S G +
Sbjct: 412 DNGELEKALVIFEDMQKRE-MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP-- 468
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
D++++ M++ G +E L+ KM+
Sbjct: 469 -------------------------------DIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 244 ELGFQANDVT 253
+ G ND T
Sbjct: 498 QEGLMKNDCT 507
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 165/339 (48%), Gaps = 27/339 (7%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRM------PLRNVVSWNAMITGYAQNRRLDEA 69
E D + ++V+G + R+ DA +L D+M P ++V++NA+I + +R+++A
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP--DIVAYNAIIDSLCKTKRVNDA 209
Query: 70 LELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTG 121
+ F+ + + ++ ++ A++ G + + A +L +++ +K +VIT+++++
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 122 YAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQE 181
+ ++G EA ++F +M + P+ T+ +++ + E Q+ L+ G
Sbjct: 270 FVKNGKVLEAKELFEEM-VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 182 NTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLIS----WNGMIAAYAHHGYGNEAIN 237
+ + LIN + K + K+F + + QR L+S +N +I + G ++A
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRE--MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 238 LFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLC 297
F++M G + TY LL G +++ + F+ + K R + + Y ++
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK-REMDLDIVTYTTVIRGM 445
Query: 298 GRAGRLKEAFYIIEGL---GVKLSLSVWGPLLAGCNVHG 333
+ G+++EA+ + L G+K + + +++G G
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 158/355 (44%), Gaps = 24/355 (6%)
Query: 51 VSWNAMITGYAQNRRLDEALELFERMPE----RDMASWNAMLTGFFQNGELNRAEKLFAE 106
V+ +++ G+ + R+ +A+ L ++M E D+ ++NA++ + +N A F E
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 107 LPQK----DVITWTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLA 162
+ +K +V+T+T+++ G +A ++ + M + PN T+ +L A
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKNG 274
Query: 163 SLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFD----DGLLRQRDLIS 218
+ E +++ + + + + S+LIN + A ++FD G L D++S
Sbjct: 275 KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA--DVVS 332
Query: 219 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLL 278
+N +I + + + LF +M + G +N VTY L+ AG VD+ ++F ++
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM- 391
Query: 279 KNRSIQVKEDHYACLVDLCGRA--GRLKEAFYIIEGLG---VKLSLSVWGPLLAG-CNVH 332
+ D + + L G G L++A I E + + L + + ++ G C
Sbjct: 392 --DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTG 449
Query: 333 GNADIGKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQ 387
+ L LK + TY+ + + + G E + KMK +GL K
Sbjct: 450 KVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQ 243
R++SA++ + + + +K+ G+ + DL ++N +I + + A+++ KM
Sbjct: 90 RLLSAIVKLKKYDVVISLGKKMEVLGI--RNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 244 ELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKED--HYACLVDLCGRAG 301
+LG++ + VT L+ V + + DK+++ I K D Y ++D +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE---IGYKPDIVAYNAIIDSLCKTK 204
Query: 302 RLKEAFYI---IEGLGVKLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKVEHENAGTYS 357
R+ +AF IE G++ ++ + L+ G CN +D +L++ I K N TYS
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 358 LLSNMYASVGKWKEA 372
L + + GK EA
Sbjct: 265 ALLDAFVKNGKVLEA 279
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 149/307 (48%), Gaps = 20/307 (6%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALE 71
+RDV T ++D L K+ + A + RM R NVV+++++ITG ++ RL +A
Sbjct: 45 KRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAER 104
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYA 123
M + ++ +++A++ + + G+L++ + ++ + Q +V T++S++ G
Sbjct: 105 RLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLC 164
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
H +EA+KM M + G PN T+ T+ + + +G ++ + + G NT
Sbjct: 165 MHNRVDEAIKMLDLMISK-GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANT 223
Query: 184 RVVSALINMYSKCGELHIARKIFDDGLLRQRDLI----SWNGMIAAYAHHGYGNEAINLF 239
+ LI Y + G++ +A +F G + LI S+N ++A +G +A++ F
Sbjct: 224 VSCNTLIKGYFQAGKIDLALGVF--GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRF 281
Query: 240 NKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGR 299
MQ+ + +TY ++ A +V E F K LK + ++ Y ++ R
Sbjct: 282 EHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYK-LKFKRVEPDFKAYTIMIAELNR 340
Query: 300 AGRLKEA 306
AG EA
Sbjct: 341 AGMRTEA 347
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 143/322 (44%), Gaps = 26/322 (8%)
Query: 78 ERDMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVITWTSMMTGYAQHGLSEEALK 133
E D+ + ++++ GF + + A + ++ + +DV+ T ++ ++ L AL+
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69
Query: 134 MFTKMQANGGLKPNNGTFVTVL-GACSGLASLTEGQQIHQLISKTGFQENTRVVSALINM 192
+ +M+ + G+ PN T+ +++ G C +++H++ SK N SALI+
Sbjct: 70 VLKRMK-DRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK-INPNVITFSALIDA 127
Query: 193 YSKCGELHIARKIFDDGLLRQRD--LISWNGMIAAYAHHGYGNEAINLFNKMQELGFQAN 250
Y+K G+L ++ + D + +++ +I H +EAI + + M G N
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 251 DVTYVELLTACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEA---F 307
VTY L + VD+GI+ D + R + L+ +AG++ A F
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDD-MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 308 YIIEGLGVKLSLSVWGPLLAGCNVHGNADIGKLVAKKILKVEHENAG-------TYSLLS 360
+ G+ ++ + +LAG +G V K + + EH TY+++
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGE------VEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 361 NMYASVGKWKEAANVRMKMKDK 382
+ KEA ++ K+K K
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFK 322
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 143/280 (51%), Gaps = 26/280 (9%)
Query: 11 FNQMQER----DVSSWTTMVDGLAKSGRIDDARALFDRM----PLRNVVSWNAMITGYAQ 62
+++M +R D+ +++++++G R+D+A+ +F+ M NVV++N +I G+ +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 63 NRRLDEALELFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQ----KDVIT 114
+R+DE +ELF M +R + ++ ++ GFFQ E + A+ +F ++ D++T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 115 WTSMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTF-VTVLGACSGLASLTEGQQIHQL 173
++ ++ G +G E AL +F +Q ++P+ T+ + + G C + +G +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQ-RSKMEPDIYTYNIMIEGMCKA-GKVEDGWDLFCS 526
Query: 174 ISKTGFQENTRVVSALINMYSKCGELHIARKIF----DDGLLRQRDLISWNGMIAAYAHH 229
+S G + N + +++ + + G A +F ++G L D ++N +I A+
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL--PDSGTYNTLIRAHLRD 584
Query: 230 GYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDE 269
G + L +M+ F D + + L+T H G +D+
Sbjct: 585 GDKAASAELIREMRSCRF-VGDASTIGLVTNMLHDGRLDK 623
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 136/311 (43%), Gaps = 50/311 (16%)
Query: 16 ERDVSSWTTMVDGLAKSGRIDDARALFDRMPLR----NVVSWNAMITGYAQNRRLDEALE 71
E V + T++D L ++DA LF M + NVV++N++I R +A
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 72 LFERMPER----DMASWNAMLTGFFQNGELNRAEKLFAELPQK----DVITWTSMMTGYA 123
L M ER ++ +++A++ F + G+L AEKL+ E+ ++ D+ T++S++ G+
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 124 QHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENT 183
H +EA MF M + PN T+ T++ + EG ++ + +S+ G NT
Sbjct: 373 MHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 184 RVVSALINMYSKCGELHIARKIF----DDGLLR--------------------------- 212
+ LI+ + + E A+ +F DG+L
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 213 ------QRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGL 266
+ D+ ++N MI G + +LF + G + N VTY +++ GL
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 267 VDEGIQYFDKL 277
+E F ++
Sbjct: 552 KEEADALFREM 562
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 171/385 (44%), Gaps = 32/385 (8%)
Query: 34 RIDDARALFDRM----PLRNVVSWNAMITGYAQNRRLDEALELFERMP----ERDMASWN 85
++DDA LF M P ++V ++ +++ A+ + D + L E+M ++ +++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 86 AMLTGFFQNGELNRAEKLFAELP----QKDVITWTSMMTGYAQHGLSEEALKMFTKMQAN 141
++ F + +L+ A + A++ + D++T S++ G+ +A+ + +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM-VE 179
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHI 201
G +P++ TF T++ +E + + G Q + ++N K G++ +
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 202 ARKIF---DDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELL 258
A + + G + + ++ +N +I A ++ N+A+NLF +M G + N VTY L+
Sbjct: 240 ALSLLKKMEQGKI-EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 259 TACSHAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGL---GV 315
+ G + + +++ R I ++ L+D + G+L EA + + + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 316 KLSLSVWGPLLAGCNVHGNADIGK-LVAKKILKVEHENAGTYSLLSNMYASVGKWKEAAN 374
+ + L+ G +H D K + I K N TY+ L + + E
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 375 VRMKMKDKGLKKQPGCSWIEVGNTV 399
+ +M +GL VGNTV
Sbjct: 418 LFREMSQRGL----------VGNTV 432
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 19/276 (6%)
Query: 158 CSGLASLTEGQQIHQLISKTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLI 217
C L E + +H IS + + L+ MYS CG + A +F+ + +++L
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEK--MSEKNLE 321
Query: 218 SWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLTACSHAGLVDEGIQYFDKL 277
+W +I +A +G+G +AI++F++ +E G + + + AC G VDEG+ +F+ +
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 278 LKNRSIQVKEDHYACLVDLCGRAGRLKEAFYIIEGLGVKLSLSVWGPLLAGCNVHGNADI 337
++ I + Y LV++ G L EA +E + ++ ++ VW L+ VHGN ++
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 338 GKLVAKKILKVEHENAGTYSLLSNMYASVGKWKEAANVRMKMKD---KGLKKQPGCSWIE 394
G A+ + ++ + K + +K D + LKK+ G
Sbjct: 442 GDYCAEVVEFLDP-------------TRLNKQSREGFIPVKASDVEKESLKKRSGI-LHG 487
Query: 395 VGNTVQVFVVGDKSHSQSEMLEYLLLGLHTKMKKFG 430
V +++Q F GD + +++ L LL L M + G
Sbjct: 488 VKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVG 523
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 80 DMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKMQ 139
D++S + +L + G N A +F ++ +K++ TW ++ +A++G E+A+ MF++ +
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 140 ANGGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKT-GFQENTRVVSALINMYSKCGE 198
G + P+ F + AC L + EG + +S+ G + +L+ MY+ G
Sbjct: 348 EEGNI-PDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGF 406
Query: 199 LHIARKIFDDGLLRQRDLISWNGMIAAYAHHG------YGNEAINL-----FNKMQELGF 247
L A + F + + + ++ W ++ HG Y E + NK GF
Sbjct: 407 LDEALE-FVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGF 465
Query: 248 ---QANDV 252
+A+DV
Sbjct: 466 IPVKASDV 473
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 11 FNQMQERDVSSWTTMVDGLAKSGRIDDARALFDRMPLRN------VVSW--------NAM 56
F++M RD SW + G + G +DA LF M + + SW AM
Sbjct: 146 FDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAM 205
Query: 57 ITGYAQNRRLDEALELFERMPERDMASWNAMLTGFFQNGELNRAEKLFAELPQKDVITWT 116
I + +++ + E D +++ + + L A + +L + + W
Sbjct: 206 IRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWA 265
Query: 117 SMMTGYAQHGLSEEALKMFTKMQANGGLKPNNGTFVTVLGACSGLASL-TEGQQIHQLIS 175
+ +T + G +E ++ F +M N G+K N F VL ACS ++ GQQ+H
Sbjct: 266 AKVTNDYREGEFQEVIRDFIEM-GNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAI 324
Query: 176 KTGFQENTRVVSALINMYSKCGELHIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEA 235
K GF+ + + LI MY K G++ A K+F + + WN M+A+Y +G EA
Sbjct: 325 KLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSS-KDETSVSCWNAMVASYMQNGIYIEA 383
Query: 236 INLFNKMQELGFQANDV 252
I L +M+ G +A+D
Sbjct: 384 IKLLYQMKATGIKAHDT 400
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 31/261 (11%)
Query: 85 NAMLTGFFQNGELNRAEKLFAELPQKDVITWTSMMTGYAQHGLSEEALKMFTKM---QAN 141
N +L G L+ ++F +P +D +W + G + G E+A +F M
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 142 GGLKPNNGTFVTVLGACSGLASLTEGQQIHQLISKTGF--QENTRVVSALINMYSKCGEL 199
G K + VL AC+ + G+Q+H L K GF +E++ + +LI Y + L
Sbjct: 187 GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCL 246
Query: 200 HIARKIFDDGLLRQRDLISWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVELLT 259
A + L + ++W + G E I F +M G + N + +L
Sbjct: 247 EDANLVLHQ--LSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLK 304
Query: 260 ACS------------HAGLVDEGIQYFDKLLKNRSIQVKEDHYACLVDLCGRAGRLKEAF 307
ACS HA + G + D L++ R L+++ G+ G++K+A
Sbjct: 305 ACSWVSDGGRSGQQVHANAIKLGFES-DCLIRCR-----------LIEMYGKYGKVKDAE 352
Query: 308 YIIEGLGVKLSLSVWGPLLAG 328
+ + + S+S W ++A
Sbjct: 353 KVFKSSKDETSVSCWNAMVAS 373