Miyakogusa Predicted Gene

Lj4g3v0134610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0134610.1 Non Chatacterized Hit- tr|I1KNG6|I1KNG6_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,93.55,0,ValRS/IleRS/LeuRS editing
domain,Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing
domain; N,CUFF.46506.1
         (411 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G04350.1 | Symbols: EMB2369 | tRNA synthetase class I (I, L, ...   672   0.0  

>AT4G04350.1 | Symbols: EMB2369 | tRNA synthetase class I (I, L, M
           and V) family protein | chr4:2128129-2133030 FORWARD
           LENGTH=973
          Length = 973

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/403 (77%), Positives = 357/403 (88%)

Query: 1   MRQWMLKITAYADRLFEDLDDLDWPESVKEMQRNWIGRSEGAEMEFCILDNDGKERDINI 60
           MRQWMLKITAYADRL EDLD+L+WPES+KEMQRNWIGRSEGAE+ F ILD +G+E D  I
Sbjct: 271 MRQWMLKITAYADRLLEDLDELEWPESIKEMQRNWIGRSEGAELNFSILDGEGRETDKEI 330

Query: 61  IVYTTRPDTIFGATYLVVAPEHPLLLSLVSVAQSKQVEDYVDLASRKSDLERTELQKEKT 120
            VYTTRPDT+FGATY+VVAPEH LL   V+  Q +QVE+Y D ASRKSDLERTELQK+KT
Sbjct: 331 TVYTTRPDTLFGATYMVVAPEHQLLSYFVTAEQKQQVEEYKDFASRKSDLERTELQKDKT 390

Query: 121 GVFTGCYAKNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDSRDYEFALKYDVPVRWVVL 180
           GVFTGCYAKNPANG+AIPIWVADYVL SYGTGAIMAVPAHD+RD EFALKY++P++WVV 
Sbjct: 391 GVFTGCYAKNPANGDAIPIWVADYVLASYGTGAIMAVPAHDTRDNEFALKYNIPIKWVVR 450

Query: 181 PDGKSVNESGKAFPGEGIIANSSNKVVGLDINGLSSKEAALKVIKWAEKSGNGKRKVNYK 240
            +  S +++ + +PG GII NSS    GLDIN LSSKEAALKVI+WAE++GNGK+KVNYK
Sbjct: 451 NEANSSDDAKQVYPGLGIIENSSTLETGLDINQLSSKEAALKVIEWAERTGNGKKKVNYK 510

Query: 241 LRDWLFARQRYWGEPIPVIFLDDSGETIPLSETELPIILPELDDFSPSGTGEPPLSKAVS 300
           LRDWLFARQRYWGEPIP++ LD+SGETI +SE+ELP+ LPEL+DF+P+GTGEPPLSKAVS
Sbjct: 511 LRDWLFARQRYWGEPIPILILDESGETIAISESELPLTLPELNDFTPTGTGEPPLSKAVS 570

Query: 301 WVKTTDSLSGRPATRETNTMPQWAGSCWYYLRFMDPNNSKELVDKTKERYWGPVDVYVGG 360
           WV T D  +G+PA RET+TMPQWAGSCWYYLRFMDP N + LVDK KE+YW PVDVYVGG
Sbjct: 571 WVNTVDPSTGKPAKRETSTMPQWAGSCWYYLRFMDPKNPEALVDKEKEKYWSPVDVYVGG 630

Query: 361 AEHAVLHLLYARFWHKVLFDIGVVSTKEPFQCVINQGIILGEV 403
           AEHAVLHLLY+RFWHKVL+DIGVVSTKEPF+CVINQGIILGEV
Sbjct: 631 AEHAVLHLLYSRFWHKVLYDIGVVSTKEPFKCVINQGIILGEV 673