Miyakogusa Predicted Gene

Lj4g3v0120360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0120360.1 Non Chatacterized Hit- tr|B7FK83|B7FK83_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,93.02,0.000000000000009,no description,NAD(P)-binding
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
NAD(P)-bindin,GO010191.path2.1
         (68 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G05530.1 | Symbols: IBR1, SDRA | indole-3-butyric acid respon...    70   2e-13

>AT4G05530.1 | Symbols: IBR1, SDRA | indole-3-butyric acid
          response 1 | chr4:2816462-2818074 FORWARD LENGTH=254
          Length = 254

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/44 (75%), Positives = 37/44 (84%)

Query: 2  EIPKRFRGKVAIVTASTQGIGFSIAERLGLEGASVVISSRKQVR 45
          ++P+R  GKVAIVTASTQGIGF I ER GLEGASVV+SSRKQ  
Sbjct: 4  KLPRRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQAN 47