Miyakogusa Predicted Gene

Lj4g3v0120120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0120120.1 Non Chatacterized Hit- tr|B6SZ45|B6SZ45_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2 SV=1,69.23,6e-18,E
set domains,Immunoglobulin E-set; RHO GUANINE DISSOCIATION
INHIBITOR-RELATED,NULL; RHO GDP-DISSOCI,CUFF.46488.1
         (253 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07880.1 | Symbols: SCN1 | Immunoglobulin E-set superfamily p...   206   2e-53
AT1G12070.1 | Symbols:  | Immunoglobulin E-set superfamily prote...   174   4e-44
AT1G62450.1 | Symbols:  | Immunoglobulin E-set superfamily prote...   170   7e-43

>AT3G07880.1 | Symbols: SCN1 | Immunoglobulin E-set superfamily
           protein | chr3:2514175-2515544 FORWARD LENGTH=240
          Length = 240

 Score =  206 bits (523), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/175 (61%), Positives = 137/175 (78%), Gaps = 2/175 (1%)

Query: 5   IGVVSNCKSMGFDDDKHNVDTGKTAIDYASGDEHHERN-LTRHVSESSIAITEDDDDDLE 63
           + +VS  + MGFDD+ +N +      + +S     + + L+R +SESS+  TE+++DD +
Sbjct: 1   MSLVSGARDMGFDDNNNNKNNKDGDDENSSSRTRADDDALSRQMSESSLCATEEEEDD-D 59

Query: 64  RKIELGPQVTLKEQLEKDKDDESLRRWKEQLLGSVDVNAVGETLEPEVKILSLAIKSPGR 123
            K++LGPQ T+KE LEKDKDDESLR+WKEQLLGSVDV  +GETL+PEV+I SLAI SPGR
Sbjct: 60  SKLQLGPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAIISPGR 119

Query: 124 DDIVLPVPETGNPPGLWFTLKEGSRYSLMFTFQVGHNIVSGLKYTNTVWKTGIKV 178
            DIVL VPE GNP G+WFTLKEGS+Y+L FTF V +NIVSGL+YTNTVWKTG+KV
Sbjct: 120 PDIVLLVPENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKV 174


>AT1G12070.1 | Symbols:  | Immunoglobulin E-set superfamily protein
           | chr1:4078913-4080106 REVERSE LENGTH=223
          Length = 223

 Score =  174 bits (442), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 94/147 (63%), Positives = 120/147 (81%), Gaps = 2/147 (1%)

Query: 34  SGDEHHERNLTRHVSESSIAITEDDDDDLERKIELGPQVTLKEQLEKDKDDESLRRWKEQ 93
           S +E   + L+R  S SS+  T+DD+++ ++K+ELGP + LKEQLEKDKDDESLRRWKEQ
Sbjct: 13  SSEEPKGQGLSRKNSHSSMCPTDDDEEEEDKKLELGPMIALKEQLEKDKDDESLRRWKEQ 72

Query: 94  LLGSVDVNAVGETLEPEVKILSLAIKSPGRDDIVLPVPETGNPP--GLWFTLKEGSRYSL 151
           LLGSVD+  VGET +P VKIL+L I+SP R+D+VL +PE G P   G WFTLKEGS+Y+L
Sbjct: 73  LLGSVDLEEVGETPDPLVKILTLTIRSPDREDMVLTIPENGKPASKGPWFTLKEGSKYTL 132

Query: 152 MFTFQVGHNIVSGLKYTNTVWKTGIKV 178
           +FTF+V +NIVSGL+Y+NTVWKTGIKV
Sbjct: 133 IFTFRVTNNIVSGLQYSNTVWKTGIKV 159


>AT1G62450.1 | Symbols:  | Immunoglobulin E-set superfamily protein
           | chr1:23115958-23117370 REVERSE LENGTH=223
          Length = 223

 Score =  170 bits (431), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/170 (57%), Positives = 128/170 (75%), Gaps = 5/170 (2%)

Query: 33  ASGDEHHERNLTRHVSESSIAITEDDDDDLERKIELGPQVTLKEQLEKDKDDESLRRWKE 92
           ASG+   +  L+R  S SS++ TEDD++D ++K+ELGP + LKEQLE+DKDDESLRRWKE
Sbjct: 12  ASGETSEKMGLSRKNSGSSLSPTEDDEEDEDKKLELGPMIALKEQLERDKDDESLRRWKE 71

Query: 93  QLLGSVDVNAVGETLEPEVKILSLAIKSPGRDDIVLPVPETG--NPPGLWFTLKEGSRYS 150
           QLLG VD+  VGET +P VKIL L I+SP R+++VL +PE G  NP G WFT+KEGS+Y+
Sbjct: 72  QLLGVVDLEDVGETPDPVVKILDLTIRSPDREEMVLTIPEDGLPNPKGPWFTIKEGSKYT 131

Query: 151 LMFTFQVGHNIVSGLKYTNTVWKTGIKVSET---LDLKSCQETTMRSMIP 197
           L+F F+V +NIVSGL+Y NTVWKTG+KV  T   L   S Q  + + ++P
Sbjct: 132 LVFNFRVTNNIVSGLRYNNTVWKTGVKVDSTKAMLGTFSPQAESYQHVMP 181