Miyakogusa Predicted Gene
- Lj4g3v0119570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0119570.1 Non Chatacterized Hit- tr|C5X400|C5X400_SORBI
Putative uncharacterized protein Sb02g041140
OS=Sorghu,75.81,1e-17,seg,NULL; SERINE ENDOPEPTIDASE DEGP2,Serine
endopeptidase DegP2; SERINE PROTEASE FAMILY S1C
HTRA-REL,TC74398.path2.1
(139 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G36950.1 | Symbols: DegP10 | DegP protease 10 | chr5:14594992... 89 1e-18
AT1G65630.1 | Symbols: DegP3 | DegP protease 3 | chr1:24406542-2... 68 2e-12
AT1G65640.1 | Symbols: DegP4 | DegP protease 4 | chr1:24411695-2... 66 6e-12
AT5G40200.1 | Symbols: DegP9 | DegP protease 9 | chr5:16070402-1... 55 1e-08
AT5G54745.1 | Symbols: | Trypsin family protein | chr5:22240256... 53 6e-08
AT1G51150.1 | Symbols: DegP6 | DegP protease 6 | chr1:18948370-1... 52 2e-07
AT3G16540.1 | Symbols: DegP11 | DegP protease 11 | chr3:5626290-... 51 3e-07
AT3G16550.1 | Symbols: DEGP12 | DEGP protease 12 | chr3:5629920-... 50 7e-07
AT2G47940.2 | Symbols: DEGP2 | DEGP protease 2 | chr2:19618372-1... 49 1e-06
AT2G47940.1 | Symbols: DEGP2 | DEGP protease 2 | chr2:19618372-1... 49 1e-06
>AT5G36950.1 | Symbols: DegP10 | DegP protease 10 |
chr5:14594992-14598216 FORWARD LENGTH=586
Length = 586
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 53/65 (81%), Gaps = 3/65 (4%)
Query: 78 RYRGAGSDVSHN---TAVELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRK 134
R R AG +S + AV+LAL+SVVK+FTVS SP+Y LPWQNK+QRE+MGSGFVI GRK
Sbjct: 91 RRRKAGKSLSISPAADAVDLALDSVVKIFTVSTSPSYFLPWQNKSQRESMGSGFVISGRK 150
Query: 135 ILTNA 139
I+TNA
Sbjct: 151 IITNA 155
>AT1G65630.1 | Symbols: DegP3 | DegP protease 3 |
chr1:24406542-24409068 REVERSE LENGTH=559
Length = 559
Score = 67.8 bits (164), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 38/50 (76%)
Query: 90 TAVELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
+A++LALNSVVKVFTVS P PWQ Q E+ GSGFVI G+KILTNA
Sbjct: 88 SAIDLALNSVVKVFTVSSKPRLFQPWQITMQSESTGSGFVISGKKILTNA 137
>AT1G65640.1 | Symbols: DegP4 | DegP protease 4 |
chr1:24411695-24413527 REVERSE LENGTH=436
Length = 436
Score = 66.2 bits (160), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 89 NTAVELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
+++++ A+NSVVKVFTV P+ L PW+N Q+E+ GSGFVI G+KILTNA
Sbjct: 65 SSSIDFAVNSVVKVFTVYSMPSVLQPWRNWPQQESGGSGFVISGKKILTNA 115
>AT5G40200.1 | Symbols: DegP9 | DegP protease 9 |
chr5:16070402-16073101 FORWARD LENGTH=592
Length = 592
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 95 ALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
++++VVKVF V PN+ LPWQ K Q + SGF+I GR++LTNA
Sbjct: 124 SMDAVVKVFCVHTEPNFSLPWQRKRQYSSGSSGFIIGGRRVLTNA 168
>AT5G54745.1 | Symbols: | Trypsin family protein |
chr5:22240256-22241233 REVERSE LENGTH=198
Length = 198
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 92 VELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
++LA +SVVK+F+ S PN + PWQ ++E SGF I GR+ILTNA
Sbjct: 39 IDLAQDSVVKIFSFSREPNVVQPWQT-TEKEYSSSGFAISGRRILTNA 85
>AT1G51150.1 | Symbols: DegP6 | DegP protease 6 |
chr1:18948370-18949290 REVERSE LENGTH=219
Length = 219
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 92 VELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
V++A ++VVK+F+ S PN + PWQ ++E SGF I GR+ILTNA
Sbjct: 52 VDVARDAVVKIFSFSREPNVVQPWQT-TEKEYSSSGFAISGRRILTNA 98
>AT3G16540.1 | Symbols: DegP11 | DegP protease 11 |
chr3:5626290-5628857 REVERSE LENGTH=555
Length = 555
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 93 ELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
EL L+SVVKVF+ S + PW+ Q+ + G+GF I GRKILTNA
Sbjct: 103 ELVLDSVVKVFSNSTEYSKSKPWKTLDQKSSRGTGFAIAGRKILTNA 149
>AT3G16550.1 | Symbols: DEGP12 | DEGP protease 12 |
chr3:5629920-5632417 REVERSE LENGTH=491
Length = 491
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 30/47 (63%)
Query: 93 ELALNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRKILTNA 139
EL L SVV+VFT S + + PWQ Q GSGF I G+KILTNA
Sbjct: 55 ELMLESVVEVFTDSTKYSKVKPWQTLNQESYGGSGFAIAGKKILTNA 101
>AT2G47940.2 | Symbols: DEGP2 | DEGP protease 2 |
chr2:19618372-19622164 REVERSE LENGTH=606
Length = 606
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 28 SHSLSSSKNCNLIKKTDNQIRRLPLPALTSYKFR-HGGGRTPPVRKAH----SPIRYRGA 82
+ SL+ + N+ +K+ P+ +Y R PP + A SP + +
Sbjct: 33 ASSLTPRASSNIKRKSSRSDSPSPILNPENYPGRVRDESSNPPQKMAFKAFGSPKKEKKE 92
Query: 83 G-SDVSHNTAVELA-------LNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVILGRK 134
SD S + + A LN+VVKV+ +P+Y LPWQ + Q + GS F+I K
Sbjct: 93 SLSDFSRDQQTDPAKIHDASFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGK 152
Query: 135 ILTNA 139
+LTNA
Sbjct: 153 LLTNA 157
>AT2G47940.1 | Symbols: DEGP2 | DEGP protease 2 |
chr2:19618372-19622164 REVERSE LENGTH=607
Length = 607
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 28 SHSLSSSKNCNLIKKTDNQIRRLPLPALTSYKFRHGGGR----TPPVRKAH----SPIRY 79
+ SL+ + N+ +K+ P P L K G R PP + A SP +
Sbjct: 33 ASSLTPRASSNIKRKSSRSDS--PSPILNPEKNYPGRVRDESSNPPQKMAFKAFGSPKKE 90
Query: 80 RGAG-SDVSHNTAVELA-------LNSVVKVFTVSCSPNYLLPWQNKAQRETMGSGFVIL 131
+ SD S + + A LN+VVKV+ +P+Y LPWQ + Q + GS F+I
Sbjct: 91 KKESLSDFSRDQQTDPAKIHDASFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG 150
Query: 132 GRKILTNA 139
K+LTNA
Sbjct: 151 DGKLLTNA 158