Miyakogusa Predicted Gene

Lj4g3v0098320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0098320.1 tr|B9H332|B9H332_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_758981 PE=4
SV=1,25.85,2e-16,FAMILY NOT NAMED,NULL; coiled-coil,NULL;
DUF827,Protein of unknown function DUF827, plant;
seg,NULL,gene.g51521.t1.1
         (455 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12150.1 | Symbols:  | Plant protein of unknown function (DUF...   206   3e-53
AT5G55860.1 | Symbols:  | Plant protein of unknown function (DUF...   101   1e-21
AT4G17210.1 | Symbols:  | Plant protein of unknown function (DUF...    86   7e-17

>AT1G12150.1 | Symbols:  | Plant protein of unknown function
           (DUF827) | chr1:4123530-4125328 REVERSE LENGTH=548
          Length = 548

 Score =  206 bits (523), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 155/434 (35%), Positives = 224/434 (51%), Gaps = 40/434 (9%)

Query: 21  KAIGYEAWKQELEHARKEYTATVTELDSCKQELNKIRQDFDAALEAKMAAFQTAAEAQRS 80
           K  G      EL+ AR++Y +T  ELD+ KQ+LNKIRQ FD+A++ K  A   AAEAQR+
Sbjct: 136 KCHGSPPHHHELDVAREQYISTTVELDAAKQQLNKIRQSFDSAMDFKATALNQAAEAQRA 195

Query: 81  AKLNSERISELSKEIADMKASIEQLNEAQV-----------------DFYRTAKGEAQEK 123
            ++NS +++ELSKEI+DMK +I QL  A                   + YRTA  EA++K
Sbjct: 196 LQVNSAKVNELSKEISDMKDAIHQLKLAAAQNLQEHANIVKEKDDLRECYRTAVEEAEKK 255

Query: 124 LESLKNEYDPELVQSLDAKLAETSAEIEVLQEQMRKVHASHMESVRLLTSELKEATKTLQ 183
           L  L+ EY+PEL ++L+AKL ET++EIEVL+E+M+K H S M +V+++T+EL EAT  LQ
Sbjct: 256 LLVLRKEYEPELSRTLEAKLLETTSEIEVLREEMKKAHESEMNTVKIITNELNEATMRLQ 315

Query: 184 DVAAEETSLKKLVFCLRTELRQVXXXXXXXXXXXXXXXXXXXNLTGELQESMEVARPQPG 243
           + A +E SL+ LV  LR EL  +                       ELQ+  E  R +  
Sbjct: 316 EAADDECSLRSLVNSLRMELEDLRRERE------------------ELQQK-EAERLEIE 356

Query: 244 TVEDLEANIFYKQSMKLQRLKXXXXXXXXXXXXXXRKAQGLXXXXXXXXXXXXXXXXXXX 303
             + LEA    ++S+KL+++K              RK + L                   
Sbjct: 357 ETKKLEA--LKQESLKLEQMKTEAIEARNEAANMNRKIESLKKETEAAMIAAEEAEKRLE 414

Query: 304 XXXXXXXXXXXXXXXXXXXXXILSDVH-SRASNPKFGG-KIKMSREEFESLRGKVKECED 361
                                ++S    S+  + +  G KIK++ +EFESL+    E E 
Sbjct: 415 LVIREVEEAKSAEEKVREEMKMISQKQESKKQDEESSGSKIKITIQEFESLKRGAGETEA 474

Query: 362 LVEKKEGAVMAELQAIYARKNELHRKVEANLKAIXXXXXXXXXXLWYTEMADSAKVAIEN 421
            +EKK   + AEL+ I  R+ E   K+EANLKAI              E A++AK  +E+
Sbjct: 475 AIEKKLATIAAELEEINKRRAEADNKLEANLKAIEEMKQATELAQKSAESAEAAKRMVES 534

Query: 422 ELKRWRQQEQVVVA 435
           EL+RWRQQE V +A
Sbjct: 535 ELQRWRQQENVQLA 548


>AT5G55860.1 | Symbols:  | Plant protein of unknown function
           (DUF827) | chr5:22610146-22612166 FORWARD LENGTH=649
          Length = 649

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 101/186 (54%), Gaps = 17/186 (9%)

Query: 38  EYTATVTELDSCKQELNKIRQDFDAALEAKMAAFQTAAEAQRSAKLNSERISELSKEIAD 97
           EY     ELD+ KQEL KIRQ  +  LE K  A     EA++ +K++SE+I  L KEIA 
Sbjct: 154 EYGEVCKELDTAKQELRKIRQVSNEILETKTVALSKVEEAKKVSKVHSEKIELLRKEIAA 213

Query: 98  MKASIEQLN-----------------EAQVDFYRTAKGEAQEKLESLKNEYDPELVQSLD 140
           +  S+EQ                   E Q   Y+    E+ +K  +LKNE+DPE  + L+
Sbjct: 214 VNESVEQTKLACSQARKEQSEIFAEKEIQQKSYKAGMEESAKKSLALKNEFDPEFAKKLE 273

Query: 141 AKLAETSAEIEVLQEQMRKVHASHMESVRLLTSELKEATKTLQDVAAEETSLKKLVFCLR 200
            +L ET  EI+ LQ+QM    AS ++SV  ++ EL EA    + +  EE SL++LV  L+
Sbjct: 274 VQLTETYNEIDELQKQMETAKASDIDSVNGVSLELNEAKGLFEKLVEEEKSLQELVESLK 333

Query: 201 TELRQV 206
            EL+ V
Sbjct: 334 AELKNV 339


>AT4G17210.1 | Symbols:  | Plant protein of unknown function
           (DUF827) | chr4:9652585-9654257 REVERSE LENGTH=527
          Length = 527

 Score = 85.5 bits (210), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 30/194 (15%)

Query: 30  QELEHARKEYTATVTELDSCKQELNKIRQDFDAALEAKMAAFQTAAEAQRSAKLNSERIS 89
           QE E  R++Y     EL   K EL +++Q F+ ++E ++A  Q A EA+ ++ +NS +I 
Sbjct: 147 QETESTREDYILITAELFMAKYELAELKQQFNLSVEERLAELQRAEEAECASMVNSNKIK 206

Query: 90  ELSKEIADMKASIEQLNE-----------------AQVDFYRTAKGEAQEKLESLKNEYD 132
           ++S +IA+M+ + E+LN                  A  + Y   K EA+++LE LK + D
Sbjct: 207 DMSHDIAEMRDAAERLNSDAARKKEEEEQIKEESIALRETYVCKKLEAKQRLEDLKRDCD 266

Query: 133 PELVQSLDAKLAETSAEIEVLQEQMRKVHASHMESVRLLTSELKEATKTLQDVAAEETSL 192
           PEL + ++ +L E S E E LQE+++            L+ ELKEA   +Q++  EE+S 
Sbjct: 267 PELKKDIE-ELMEISTENERLQEEIK------------LSGELKEAKSAMQEIYDEESSY 313

Query: 193 KKLVFCLRTELRQV 206
           K LV  L  EL  V
Sbjct: 314 KSLVGSLTVELDGV 327