Miyakogusa Predicted Gene

Lj4g3v0037570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0037570.1 Non Chatacterized Hit- tr|I1KNQ6|I1KNQ6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42426
PE,82.68,0,GTPase_EngA: ribosome-associated GTPase EngA,GTP-binding
protein EngA; small_GTP: small GTP-binding ,CUFF.46562.1
         (563 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G39960.1 | Symbols:  | GTP binding;GTP binding | chr5:1599419...   665   0.0  
AT3G12080.1 | Symbols: emb2738 | GTP-binding family protein | ch...   185   7e-47
AT3G12080.2 | Symbols: emb2738 | GTP-binding family protein | ch...   148   1e-35
AT1G78010.1 | Symbols:  | tRNA modification GTPase, putative | c...    59   9e-09

>AT5G39960.1 | Symbols:  | GTP binding;GTP binding |
           chr5:15994195-15996820 FORWARD LENGTH=621
          Length = 621

 Score =  665 bits (1716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/522 (64%), Positives = 410/522 (78%), Gaps = 11/522 (2%)

Query: 45  LDFTQLPISSLPTVIIIGRPNVGKSALFNRLIRRREALVYNTPEDHVTRDIREGVAKLGN 104
           +DFT++  + LPTV+++GRPNVGKSAL+NRLIRRREALVYNTP+DHVTRDIREG+AKLG+
Sbjct: 107 IDFTKIDANLLPTVMLMGRPNVGKSALYNRLIRRREALVYNTPDDHVTRDIREGIAKLGD 166

Query: 105 LRFRVLDSAGLXXXXXXXXXILHRTASITANFFAASHVALFLTDARAGLHPLDQEVGKWL 164
           LRF VLDSAG+         IL RT ++TAN  A +  A+ + D RAGLHPLD EVGKWL
Sbjct: 167 LRFNVLDSAGIETEVSSGT-ILGRTTAMTANVLARTQFAVLIIDVRAGLHPLDLEVGKWL 225

Query: 165 RKNAPQLKPIVAMNKSEXXXXXXXXXXXXGNEMCRLGFGDPIAISAETGLGMHDLYLSLK 224
           RK+APQ+KPIV MNKSE             +E   LGFG+PIAISAETGLGM  LY  L+
Sbjct: 226 RKHAPQIKPIVVMNKSESIGSLDEV----ASEALALGFGEPIAISAETGLGMTTLYEVLR 281

Query: 225 PLLEDYMLRVLNVNDEGAQENSNSEDTSSPEAEESKLPLQLAIVGRPNVGKSTLMNTLLQ 284
           PLLEDY + +LN  D G+Q++  +++  S E +ESKLPLQLAIVG+PNVGKSTL+N LL+
Sbjct: 282 PLLEDYTVEMLN--DIGSQDDVLTDENLSDEIDESKLPLQLAIVGKPNVGKSTLLNALLE 339

Query: 285 EDRVLVGPEAGLTRDSIRTQFEFEGRTIYLVDTAGWLQRTKQEKGAASLSIMQSRKSLLR 344
           E+RVLVGPEAGLTRD++R QFEF+GRT+YLVDTAGWL+RT+++KG ASLSIMQSRKSL+R
Sbjct: 340 EERVLVGPEAGLTRDAVRVQFEFQGRTVYLVDTAGWLERTERDKGPASLSIMQSRKSLMR 399

Query: 345 AHVVALVLDAEEIINERRSMKHAEVVIARRAVEEGRGLVVIVNKMDLLRGKASS--FEKV 402
           AHV+ALVLDAEEII  + SM H+EVVIARRAVEEGRGLVVIVNKMD LRG+ +S  ++K+
Sbjct: 400 AHVIALVLDAEEIIKAKCSMTHSEVVIARRAVEEGRGLVVIVNKMDRLRGRENSEMYKKI 459

Query: 403 MXXXXXXXXXXXXXXXXXXXXFTSALEGRGRTAVLEQVIDTYEKWCSRLSTARLNRWMQK 462
                                F SALEGRGR  V+++V DTY++WCSRLST RLNRW++K
Sbjct: 460 KEAVPIEIQTVIPQITGIPVVFISALEGRGRMEVMKEVTDTYKRWCSRLSTGRLNRWLRK 519

Query: 463 VMSRHSWKDQAAQPKIKYFTQVKARPPTFVAFLRGKTQLADTDIRFLTKSLKEDFDLGGI 522
           VMSRHSWKD A+QPKIK+FTQVKARPPTFVAF+ GKTQL ++DIRFLT+SLKEDFDLGG 
Sbjct: 520 VMSRHSWKDTASQPKIKFFTQVKARPPTFVAFVSGKTQLLESDIRFLTRSLKEDFDLGGT 579

Query: 523 PIRIMQRAVTKK--EVSGNSKSGHSAGRVAERMMSDKRSVLA 562
           PIRI+QR + +     +G   SG+S+ RV +R  SDKR++ A
Sbjct: 580 PIRIIQRVIPRAPPSGTGGGGSGNSSSRVVQRTTSDKRTLSA 621


>AT3G12080.1 | Symbols: emb2738 | GTP-binding family protein |
           chr3:3847851-3851980 FORWARD LENGTH=663
          Length = 663

 Score =  185 bits (470), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 261/557 (46%), Gaps = 71/557 (12%)

Query: 39  KNKPLDLDFTQLPISSLPTVIIIGRPNVGKSALFNRLIRRREALVYNTPEDHVTRDIREG 98
           K K L  +  Q+P   L  V I+GRPNVGKSALFNRL+    A+V + P   VTRD   G
Sbjct: 142 KGKRLAKNTQQIPEHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEP--GVTRDRLYG 199

Query: 99  VAKLGNLRFRVLDSAGLXXXXXXXXXILH-----------------RTASIT-------- 133
            +  G+  F V+D+ G+         ++                  R A+I         
Sbjct: 200 RSYWGDQEFVVVDTGGVMTVSKSPSGVMEELNVSTTIGMEGIPLSSREAAIARMPSMIEK 259

Query: 134 --ANFFAASHVALFLTDARAGLHPLDQEVGKWLRKNAPQLKPIVAMNKSEXXXXXXXXXX 191
                   S V +F+ D +AG    D E+  WLRK       I+A+NK E          
Sbjct: 260 QATAAVDESAVIIFVVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCESPRKGLMQ-- 317

Query: 192 XXGNEMCRLGFGDPIAISAETGLGMHDLYLSLKPLLEDYMLRVLNVNDEGAQENSNSEDT 251
              +E   LGF  PI ISA +G G  +L      L+   ++++  +              
Sbjct: 318 --ASEFWSLGF-TPIPISALSGTGTGELL----DLVCSGLIKLEIME------------N 358

Query: 252 SSPEAEESKLPLQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEF-EGR 310
              E EE+ +P  +AI+GRPNVGKS+++N L++EDR +V P +G TRD+I  +F   +G 
Sbjct: 359 IEEEEEENYIP-AIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGE 417

Query: 311 TIYLVDTAGWLQRTKQEKGAAS---LSIMQSRKSLLRAHVVALVLDAEEIINERRSMKHA 367
              L+DTAG  +++      ++   +S+ ++ +++ R+ VVALV++A   I E+      
Sbjct: 418 KFRLIDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQ------ 471

Query: 368 EVVIARRAVEEGRGLVVIVNKMDLLRGKASSFEKVMXXXXXXXXXXXXXXXXXXXXFTSA 427
           ++ IA R   EG+G +V+VNK D +  K    ++                      +++A
Sbjct: 472 DLKIAERIEREGKGCLVVVNKWDTIPNKN---QETAAHYEDDVREKLRSLKWAPIVYSTA 528

Query: 428 LEGRGRTAVLEQVIDTYEKWCSRLSTARLNRWMQKVMSRHSWKDQ--AAQPKIKYFTQVK 485
           + G     ++       ++   RLSTA LN+ +++ ++  S        + ++ Y TQ  
Sbjct: 529 ITGHSVDNIVVAAATVQKERSRRLSTAILNQVIREAVAFKSPPRTRGGKRGRVYYCTQAA 588

Query: 486 ARPPTFVAFLRGKTQLADTDIRFLTKSLKEDFDLGGIPIRIMQRAVTKKEVSGNSKSGHS 545
            RPPTFV F+      +DT  R++ K L+ D    G PIR++ R  ++K    N   G +
Sbjct: 589 IRPPTFVFFVNDAKLFSDTYRRYMEKQLRTDAGFAGTPIRLLWR--SRKRSDKNGGGGGT 646

Query: 546 ---AGRVAERMMSDKRS 559
              AG   +R ++ KR+
Sbjct: 647 MRMAGLTRQRNLATKRT 663



 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 7/111 (6%)

Query: 226 LLEDY---MLRVLNVNDEGAQENSNSEDTSSPEAEESKLPLQL----AIVGRPNVGKSTL 278
           ++ DY   + R L + DE  +                ++P  L    AIVGRPNVGKS L
Sbjct: 115 IVRDYATTLSRELKIEDETIEGKETRRKGKRLAKNTQQIPEHLLQRVAIVGRPNVGKSAL 174

Query: 279 MNTLLQEDRVLVGPEAGLTRDSIRTQFEFEGRTIYLVDTAGWLQRTKQEKG 329
            N L+ E+R +V  E G+TRD +  +  +  +   +VDT G +  +K   G
Sbjct: 175 FNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMTVSKSPSG 225


>AT3G12080.2 | Symbols: emb2738 | GTP-binding family protein |
           chr3:3847851-3851677 FORWARD LENGTH=587
          Length = 587

 Score =  148 bits (373), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 189/388 (48%), Gaps = 61/388 (15%)

Query: 39  KNKPLDLDFTQLPISSLPTVIIIGRPNVGKSALFNRLIRRREALVYNTPEDHVTRDIREG 98
           K K L  +  Q+P   L  V I+GRPNVGKSALFNRL+    A+V + P   VTRD   G
Sbjct: 142 KGKRLAKNTQQIPEHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEP--GVTRDRLYG 199

Query: 99  VAKLGNLRFRVLDSAGLXXXXXXXXXILH-----------------RTASIT-------- 133
            +  G+  F V+D+ G+         ++                  R A+I         
Sbjct: 200 RSYWGDQEFVVVDTGGVMTVSKSPSGVMEELNVSTTIGMEGIPLSSREAAIARMPSMIEK 259

Query: 134 --ANFFAASHVALFLTDARAGLHPLDQEVGKWLRKNAPQLKPIVAMNKSEXXXXXXXXXX 191
                   S V +F+ D +AG    D E+  WLRK       I+A+NK E          
Sbjct: 260 QATAAVDESAVIIFVVDGQAGPSGADVEIADWLRKYYSHKYIILAVNKCESPRKGLMQ-- 317

Query: 192 XXGNEMCRLGFGDPIAISAETGLGMHDLYLSLKPLLEDYMLRVLNVNDEGAQENSNSEDT 251
              +E   LGF  PI ISA +G G  +L      L+   ++++  +              
Sbjct: 318 --ASEFWSLGF-TPIPISALSGTGTGELL----DLVCSGLIKLEIME------------N 358

Query: 252 SSPEAEESKLPLQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEF-EGR 310
              E EE+ +P  +AI+GRPNVGKS+++N L++EDR +V P +G TRD+I  +F   +G 
Sbjct: 359 IEEEEEENYIP-AIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGE 417

Query: 311 TIYLVDTAGWLQRTKQEKGAAS---LSIMQSRKSLLRAHVVALVLDAEEIINERRSMKHA 367
              L+DTAG  +++      ++   +S+ ++ +++ R+ VVALV++A   I E+      
Sbjct: 418 KFRLIDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQ------ 471

Query: 368 EVVIARRAVEEGRGLVVIVNKMDLLRGK 395
           ++ IA R   EG+G +V+VNK D +  K
Sbjct: 472 DLKIAERIEREGKGCLVVVNKWDTIPNK 499


>AT1G78010.1 | Symbols:  | tRNA modification GTPase, putative |
           chr1:29333535-29336297 FORWARD LENGTH=560
          Length = 560

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 14/131 (10%)

Query: 263 LQLAIVGRPNVGKSTLMNTLLQEDRVLVGPEAGLTRDSIRTQFEFEGRTIYLVDTAGWLQ 322
           LQ+AIVGRPNVGKS+L+N   + +R +V   AG TRD +       G  I L+DTAG ++
Sbjct: 318 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVVEANVTVRGVPITLLDTAG-IR 376

Query: 323 RTKQ--EKGAASLSIMQSRKSLLRAHVVALVLDAEEIINERRSMKHAEVVIARRAVEEGR 380
            T    EK    + + +S  +   A V+ + + A E   E    +  E++   R ++  +
Sbjct: 377 ETNDIVEK----IGVERSETAAKVADVIIMAVSAVEGWTE----EDTELL---RKIQSDK 425

Query: 381 GLVVIVNKMDL 391
            +++++NK+D 
Sbjct: 426 PMILVMNKIDC 436