Miyakogusa Predicted Gene
- Lj4g3v0036510.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0036510.1 tr|G7LJJ5|G7LJJ5_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_8g101580 PE=4
SV=1,26.89,2e-18,F-box,F-box domain, cyclin-like; FBA_1,F-box
associated domain, type 1; FBOX,F-box domain, cyclin-li,CUFF.46387.1
(421 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 102 6e-22
AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction ... 87 1e-17
AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction ... 87 1e-17
AT3G07870.1 | Symbols: | F-box and associated interaction domai... 75 6e-14
AT3G23880.1 | Symbols: | F-box and associated interaction domai... 71 2e-12
AT1G30790.1 | Symbols: | F-box and associated interaction domai... 60 2e-09
AT3G52320.1 | Symbols: | F-box and associated interaction domai... 56 4e-08
AT3G23960.1 | Symbols: | F-box and associated interaction domai... 55 1e-07
AT5G18160.1 | Symbols: | F-box and associated interaction domai... 54 1e-07
AT2G31470.1 | Symbols: DOR | F-box and associated interaction do... 54 2e-07
AT3G16210.1 | Symbols: | F-box family protein | chr3:5494533-54... 52 9e-07
AT1G26515.1 | Symbols: | F-box and associated interaction domai... 51 1e-06
AT5G62660.1 | Symbols: | F-box and associated interaction domai... 51 2e-06
AT4G17780.1 | Symbols: | F-box and associated interaction domai... 50 3e-06
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD LENGTH=427
Length = 427
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 182/419 (43%), Gaps = 65/419 (15%)
Query: 15 LEFPLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPTTCLVLSDRRYV 74
L P I+ +I +LPA S+ R V F L +DP F ++++ L+L + V
Sbjct: 34 LVLPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLD------LILRNES-V 86
Query: 75 SCIDCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISD-----------------HG 117
+ +L+ S+ N + + G + N P+ D +
Sbjct: 87 RSLHRKLIVSSHNLYSLDFNSIGD-GIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYD 145
Query: 118 SRRRFITIDCGRP----VNLVNSANGLLCLRTFGFPHDRALYYICNPLSAELMVLP--IA 171
RR + ++ V +V S+NGL+C+ P + A++ + NP + + LP
Sbjct: 146 DRRVMLKLNAKSYRRNWVEIVGSSNGLVCIS----PGEGAVF-LYNPTTGDSKRLPENFR 200
Query: 172 PTPIN---QNLRFSAFGYDALTNRYKILQLVVTSTNQMVAELFQIGDDKWRVIDNNXXXX 228
P + N + FG+D LT+ YK+++LV TS + + A ++ + D WR I N
Sbjct: 201 PKSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSEDILDASVYSLKADSWRRICNLNYEH 260
Query: 229 XXXXXXXXFDPSLNGALHWI-TQSPRISELICSFDLNKNEFKWVAPPSHFDDDYLNEISG 287
NGA+HW+ T+S ++ +FD+ EF+ + P +D + S
Sbjct: 261 NDGSYTSGV--HFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEA-EDCSHRFSN 317
Query: 288 ISVGVLKGCLCL---CYVKGSDVFETWLMESYGEVESWTKAFSIDIKSYVGLRPQDKHRP 344
VG L G LC+ CY D+ W+M YGE +SW++ I++ Y ++P
Sbjct: 318 FVVGSLNGRLCVVNSCYDVHDDI---WVMSEYGEAKSWSR-IRINLL-YRSMKPL----- 367
Query: 345 IGFSSSGAMLLKADSGSDSNSHSLVSYSAETGMFRTVDIVGIAFN--IEATPHVLSFLS 401
+ +LL+ D LV Y+ ET + I G+ + EA +V S +S
Sbjct: 368 CSTKNDEEVLLELDG-------DLVLYNFETNASSNLGICGVKLSDGFEANTYVESLIS 419
>AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction
domains-containing protein | chr4:7441815-7443157
FORWARD LENGTH=413
Length = 413
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 147/357 (41%), Gaps = 80/357 (22%)
Query: 18 PLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPTT----CLVLSDRRY 73
P+ I+ DIF +LPA +L+RC + +LI DP F + ++ R T ++L
Sbjct: 5 PMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGALR 64
Query: 74 VSCIDCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFITIDCGRPVNL 133
+ +D L S S+ H G P +
Sbjct: 65 LYSVDLDSLDSVSDVEHPMKR---------------------------------GGPTEV 91
Query: 134 VNSANGLLCLRTFGFPHDRALYYICNPLSAELMVLPIAPTPIN-------QNLRFSAFGY 186
S+NGL+ L P D A++ NP + ++ LP P+ I+ + F GY
Sbjct: 92 FGSSNGLIGLSNS--PTDLAVF---NPSTRQIHRLP--PSSIDLPDGSSTRGYVFYGLGY 144
Query: 187 DALTNRYKILQLV---VTSTNQM------VAELFQIGDDKWRVIDNNXXXXXXX------ 231
D++++ YK++++V + S +++ ++F + + W+ I++
Sbjct: 145 DSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYH 204
Query: 232 -XXXXXFDPSLNGALHWITQSPR-----ISELICSFDLNKNEFKWVAPPSHFDDDYLNEI 285
+ +LHW+ PR LI FDL EF+ V P + N
Sbjct: 205 LLYRRGYGVLAGNSLHWVL--PRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANG--NVD 260
Query: 286 SGISVGVLKGCLCLCYVKGSDVFETWLMESYGEVESWTKAFSID----IKSYVGLRP 338
+ +GVL GCLCL + W+M+ Y +SWTK F++ +KS+ +RP
Sbjct: 261 IQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRP 317
>AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction
domains-containing protein | chr4:7441815-7443157
FORWARD LENGTH=413
Length = 413
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 147/357 (41%), Gaps = 80/357 (22%)
Query: 18 PLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPTT----CLVLSDRRY 73
P+ I+ DIF +LPA +L+RC + +LI DP F + ++ R T ++L
Sbjct: 5 PMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGALR 64
Query: 74 VSCIDCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFITIDCGRPVNL 133
+ +D L S S+ H G P +
Sbjct: 65 LYSVDLDSLDSVSDVEHPMKR---------------------------------GGPTEV 91
Query: 134 VNSANGLLCLRTFGFPHDRALYYICNPLSAELMVLPIAPTPIN-------QNLRFSAFGY 186
S+NGL+ L P D A++ NP + ++ LP P+ I+ + F GY
Sbjct: 92 FGSSNGLIGLSNS--PTDLAVF---NPSTRQIHRLP--PSSIDLPDGSSTRGYVFYGLGY 144
Query: 187 DALTNRYKILQLV---VTSTNQM------VAELFQIGDDKWRVIDNNXXXXXXX------ 231
D++++ YK++++V + S +++ ++F + + W+ I++
Sbjct: 145 DSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYH 204
Query: 232 -XXXXXFDPSLNGALHWITQSPR-----ISELICSFDLNKNEFKWVAPPSHFDDDYLNEI 285
+ +LHW+ PR LI FDL EF+ V P + N
Sbjct: 205 LLYRRGYGVLAGNSLHWVL--PRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANG--NVD 260
Query: 286 SGISVGVLKGCLCLCYVKGSDVFETWLMESYGEVESWTKAFSID----IKSYVGLRP 338
+ +GVL GCLCL + W+M+ Y +SWTK F++ +KS+ +RP
Sbjct: 261 IQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRP 317
>AT3G07870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:2510871-2512124
FORWARD LENGTH=417
Length = 417
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 156/408 (38%), Gaps = 79/408 (19%)
Query: 17 FPLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPTTCLVLSDRRYVSC 76
P I+ DIF +LP S+ R VC ++++++T R S +PT
Sbjct: 28 LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHG-RLSSSSSSPTK------------ 74
Query: 77 IDCRLLCSASNSNHGTS----SCLATIGKTPSSTTRSNSPISDHGSRRRFITIDCGRPVN 132
C LL S +G S KT T R S + + +
Sbjct: 75 -PCLLLHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPE---------------FD 118
Query: 133 LVNSANGLLCLRTFGFPHDRALY----YICNPLSAELMVLPIAPTPINQNLRFSAFGYDA 188
+V S NGLLCL +LY Y+ NP + + LP + FG+
Sbjct: 119 VVGSCNGLLCLSD-------SLYNDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHE 171
Query: 189 LTNRYKILQLVV---TSTN-----------QMVAELFQIGDDKWRVIDNNXXXXXXXXXX 234
+T YK+L++V +S+N Q QI + D +
Sbjct: 172 MTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAP 231
Query: 235 XXF-----DPSLNGALHWITQSPR--ISELICSFDLNKNEFKWVAPPSHFDDDYLNEISG 287
F + +NG LH++T+ R SFDL EFK + P D LN +
Sbjct: 232 YKFVKRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPKP---DCGGLNRTNH 288
Query: 288 ISVGVLKGCLCLCYVKGSDVFETWLMESYGEVESWTKAFSIDIKSYVGLRPQDKHRPIGF 347
V LKGCLC + W+M++YG ESW K +SI GL+ Q+ RP+
Sbjct: 289 RLVN-LKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLK-QNLDRPMWI 346
Query: 348 SSSGA---------MLLKADSGSDSNSHSLVSYSAETGMFRTVDIVGI 386
+ +L + + S LV+Y + G F+ + G+
Sbjct: 347 WKNAENGKVVRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGL 394
>AT3G23880.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:8622061-8623155
REVERSE LENGTH=364
Length = 364
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 159/367 (43%), Gaps = 48/367 (13%)
Query: 17 FPLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPTTCLVLSDRRYVSC 76
PL ++ +I +LP SL R VC+++++LI++ F A L+L + +
Sbjct: 14 LPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLF-------ALKHALILETSKATTS 66
Query: 77 IDCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFITIDCGRPV-NLVN 135
++ H S C+ ++ S +S+H GR +V
Sbjct: 67 TKSPYGVITTSRYHLKSCCIHSLYNA------STVYVSEHDGEL------LGRDYYQVVG 114
Query: 136 SANGLLCLRTFGFPHDRALYYICNPLSAELMVLPIA--PTPINQNLRFSAFGYDALTNRY 193
+ +GL+C F +D++LY + NP L + T ++ + FGYD + Y
Sbjct: 115 TCHGLVC---FHVDYDKSLY-LWNPTIKLQQRLSSSDLETSDDECVVTYGFGYDESEDDY 170
Query: 194 KILQLVVTSTN-QMVAELFQIGDDKWRVIDNNXXXXXXXXXXXXFDPSLNGALHWITQSP 252
K++ L+ ++ +++ WR + + +NG L+W S
Sbjct: 171 KVVALLQQRHQVKIETKIYSTRQKLWRS-NTSFPSGVVVADKSRSGIYINGTLNWAATSS 229
Query: 253 RISELICSFDLNKNEFKWVAPPSHFDDDYLNEISGISVGVLKGCLCL-CYVKGSDVFETW 311
S I S+D++++EFK + P +++G L+GCL + CY KG++ + W
Sbjct: 230 SSSWTIISYDMSRDEFKELPGPVCCGRGCFT----MTLGDLRGCLSMVCYCKGANA-DVW 284
Query: 312 LMESYGEVESWTKAFSIDIKSYVGLRPQDKHRPIGFSSSGAMLLKADSGSDSNSHSLVSY 371
+M+ +GEV SW+K SI GL D RP+ S +LL+ SG L Y
Sbjct: 285 VMKEFGEVYSWSKLLSIP-----GL--TDFVRPLWISDGLVVLLEFRSG-------LALY 330
Query: 372 SAETGMF 378
+ G F
Sbjct: 331 NCSNGRF 337
>AT1G30790.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:10932713-10933912
FORWARD LENGTH=399
Length = 399
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 162/397 (40%), Gaps = 55/397 (13%)
Query: 13 HILEFPLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRA---PTTCLVLS 69
I P + +I +LPA SL++ V + ++I + SF + S + P + S
Sbjct: 5 EIDHIPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFS 64
Query: 70 DRRYVSCIDCRLLC--SASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFITIDC 127
+ + S + RL S+ + +SS + + T S T SN+ S R I
Sbjct: 65 NGSFPSDKEKRLFIFSSSHEGHESSSSVITNLDTTIPSLTVSNNLAS------RCI---- 114
Query: 128 GRPVNLVNSANGLLCLRTFGFPHDRALYYICNPLSAELMVLPIAPTPINQNLRFSAFGYD 187
S NG + + + ICNP + +++VLPI P+ ++R + GYD
Sbjct: 115 --------SVNGFIACSLY------TRFTICNPSTRQVIVLPILPSGRAPDMRSTCIGYD 160
Query: 188 ALTNRYKILQLV---VTSTNQMVAELFQI--GDDK---WRVIDNNXXXXXXXXXXXXFDP 239
+ +++K L L+ + + + V L GD K WR I N
Sbjct: 161 PVDDQFKALALISSCIPNKDSTVEHLVLTLKGDKKNYSWRQIQGNNNIPPYSPVTMRV-- 218
Query: 240 SLNGALHWITQSPR--ISELICSFDLNKNEFKWVAPPSHF----DDDYLNEISGISVGVL 293
+NG +++ +PR ++ +I FD+ + ++ P +D L E G ++
Sbjct: 219 CINGVVYYGAWTPRQSMNAVIVCFDVRSEKITFIKTPKDVVRWCNDSILMEYKGKLASIV 278
Query: 294 KGCLCLCYVKGSDVFETWLMESYGEVESWTKAF-SIDIKSYVGLRPQDKHRPIGFSSSGA 352
+ D F+ W++E E + W+K I + + + + P G + G
Sbjct: 279 RN-----RYSRFDTFDLWVLEDI-EKQEWSKQTCEIPLSVWDSVENFNMSFP-GINKFGE 331
Query: 353 MLLKAD--SGSDSNSHSLVSYSAETGMFRTVDIVGIA 387
++L SG S + Y ET R V + GIA
Sbjct: 332 IILAPTCLSGYHLRSFYIFYYHVETKKIRRVRLEGIA 368
>AT3G52320.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:19403020-19404192
REVERSE LENGTH=390
Length = 390
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 52/273 (19%)
Query: 16 EFPLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPTTCLVLSDRRYVS 75
E P +L DI +LPA SL+R V + +LIT F + + +CL +
Sbjct: 26 EIPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCL------FAY 79
Query: 76 CIDCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFITIDCGRPVNLVN 135
+D N L + + + ++ + D S I I G LVN
Sbjct: 80 LVD--------RENQSKYLLLQSSSSSRHDHSDTSVSVIDQHST---IPIMGG---YLVN 125
Query: 136 SANGLLCLRTFGFPHDRALYYICNPLSAELMVLPIAPTPINQNLRFSAFGYDALTNRYKI 195
+A GLLC RT R + +CNP + +++ LPI + N ++ FG+D + YK+
Sbjct: 126 AARGLLCYRT-----GRRV-KVCNPSTRQIVELPIMRSKTNV---WNWFGHDPFHDEYKV 176
Query: 196 L---------QLVVTSTNQMVAELFQIGDDKWRVIDNNXXXXXXXXXXXXFDP-----SL 241
L Q VV S +Q++ + +G WR ++ F P ++
Sbjct: 177 LSLFWEVTKEQTVVRSEHQVL--VLGVGAS-WRNTKSH------HTPHRPFHPYSRGMTI 227
Query: 242 NGALHWITQSPRISELICSFDLNKNEFKWVAPP 274
+G L++ ++ ++ SFDL+ EF + P
Sbjct: 228 DGVLYYSARTDANRCVLMSFDLSSEEFNLIELP 260
>AT3G23960.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:8657736-8658944
FORWARD LENGTH=402
Length = 402
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 29/222 (13%)
Query: 7 KCGLGFHILEFPLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPTTCL 66
K L HI P+ +L +IF KLP S+ C +V + ++ F +L+++++ +
Sbjct: 24 KTSLNGHI---PIDLLIEIFLKLPVKSIATCRSVSKFWTYVLGRQDFTELFLTKSSSRPQ 80
Query: 67 VLSDRRYVSCIDCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFITID 126
+L C+ N SS P + ++SPI+ + + D
Sbjct: 81 LL------------FACANDNGYFFFSS------NQPQNLDENSSPIAAYPLTHVPKSRD 122
Query: 127 CGRPVNLVNSANGLLCLRTFGFPHDRALYYICNPLSAELMVLPIAPTPINQNLRFSAF-G 185
G P+N + S G L+ P D ++ Y NP + E + LP + ++F G
Sbjct: 123 LGPPINGLVSLRGERILKGRIRPVDVSIIY--NPSTGESLTLPKTNMTRKKIYTVTSFLG 180
Query: 186 YDALTNRYKILQLVVTSTNQMVAELFQI-----GDDKWRVID 222
YD + +YK+L + ++ E +Q+ G WR+I
Sbjct: 181 YDPIEKQYKVLSMNMSYEKHPKCEGYQVLTLGTGKLSWRMIK 222
>AT5G18160.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:6002770-6003909
FORWARD LENGTH=379
Length = 379
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 146/407 (35%), Gaps = 69/407 (16%)
Query: 7 KCGLGFHILE---FPLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPT 63
+C G HI + PL I +I +LPA S++R +V + ++ T P F + +
Sbjct: 21 RCSHGNHISQSNSIPLDITIEILSRLPAKSIVRSRSVSKLWSSITTTPEFIKHRSKKTSP 80
Query: 64 TCLVLSDRRYVSCIDCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFI 123
C++L R++ I + S + N T S + I +G RR
Sbjct: 81 PCVLLIFRKHDKLI---VFSSPQHQN------------TYSHVQDYHIEIPKNGFIRR-- 123
Query: 124 TIDCGRPVNLVNSANGLLCLRTFGFPHDRALYYICNPLSAELMVLPIAPTPINQNLRFSA 183
++S +GL+CL ICNP LP P
Sbjct: 124 ----------LDSVHGLICLE------GSKQLVICNPTLKRFFPLP-EPQGTGDEYNVGG 166
Query: 184 F-GYDALTNRYKILQLVVTSTNQMVAELFQIGDDKWRVIDNNXXXXXXXXXXXXFDPSLN 242
F GY+ + +YK L +V Q++ Q + WRV +N
Sbjct: 167 FLGYEPIEGKYKALCIVRGWNTQVLTLEIQ---ESWRVTKPGYTHWPTKDTGR----CIN 219
Query: 243 GALHW----ITQSPRISELICSFDLNKNEFKWVAPPSHFDDDYLNEISGISVGVLKGCLC 298
G +++ + PR +I FDL EF + P D +L + +G L
Sbjct: 220 GVIYYKAIIFDRVPR--HVIFGFDLRYEEFTHIEFPMRNYDRFL-------MVSYEGRLA 270
Query: 299 LCYVKGSDVFETWLMESYGEVESWTKAFSIDIKSYVGLRPQDKHRPIGFSSSGAMLLKAD 358
L S V E W +E G + + F + + L+ G +G ++
Sbjct: 271 LI-SSTSSVVEIWSLEDAGNRKWSYEQFHLCLPPNTSLK--------GVIDAGELIYTG- 320
Query: 359 SGSDSNSHSLVSYSAETGMFRTVDIVGIAFNIEATPHVLSFLSLKDM 405
S + S +V + + R GIA N P L F + D
Sbjct: 321 -FSLNRSFCVVYFDPKKNNIRETKFQGIADNQIWQPDRLGFDLVNDF 366
>AT2G31470.1 | Symbols: DOR | F-box and associated interaction
domains-containing protein | chr2:13407492-13408655
REVERSE LENGTH=387
Length = 387
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 153/390 (39%), Gaps = 61/390 (15%)
Query: 18 PLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPTTCLVLSDRRYVSCI 77
P+ ++ +IF + P S+ RC V + +++ P F +LY+++ SC
Sbjct: 26 PIDLVIEIFSRSPVKSIARCRCVSKLWASILRLPYFTELYLTK--------------SCA 71
Query: 78 DCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFITIDCGRPVNLVNSA 137
RLL + H +T P + S+SP++ S I D GR N+++
Sbjct: 72 RPRLLFAC--QKHRELFFFST--PQPHNPNESSSPLA--ASFHMKIPFD-GR-FNIISPI 123
Query: 138 NGLLCLRTFGFPHDRA----LYYICNPLSAELMVLPIAPTPINQNLRFSAFGYDALTNRY 193
GL+ +R R + ICNP + + + LP P + S FGYD + ++
Sbjct: 124 GGLVFVRYEQILKGRKTPEFVSAICNPSTGQSLTLP-KPKTRKRIWGTSHFGYDPIEKQF 182
Query: 194 KILQLVVTSTNQMVAELFQIGDDK--WRVIDNNXXXXXXXXXXXXFDPSLNGALHWITQS 251
K+L + + + +G + WR I+ + +NG L++ ++
Sbjct: 183 KVLSMNIGDGVYKEHYVLTLGTENLSWRRIECSIPHVHGSKGI-----CINGVLYYRAKA 237
Query: 252 PRISE--LICSFDLNKNEFKWVA--PPSHFDDDYLNEISGISVGVLKGCLCLC------Y 301
S +I FD+ +F ++ P+ Y +++ + V +G +C +
Sbjct: 238 DMFSGTLMIVCFDVRFEKFSYIKILKPTTTLISYNGKLASL---VWEGPSYICGKRFEMW 294
Query: 302 VKGSDVFETWLMESYGEVESWTKAFSIDIKSYVGLRPQDKHRPIGFSSSGAMLLKADSGS 361
V G WL +Y W D+ + G+ +G +
Sbjct: 295 VLGDPEKHEWLKHTYELRPRWQNVLGEDLLIFAGM-------------TGTNEIVLSPKY 341
Query: 362 DSNSHSLVSYSAETGMFRTVDIVGI-AFNI 390
S+ + Y+ E R V+I G+ AF +
Sbjct: 342 PSHPFYVFYYNLERNTIRRVEIQGMGAFKV 371
>AT3G16210.1 | Symbols: | F-box family protein |
chr3:5494533-5495615 REVERSE LENGTH=360
Length = 360
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 119/334 (35%), Gaps = 51/334 (15%)
Query: 18 PLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPTTCLVLSDRRYVSCI 77
P + +I +L L R VC +++LI DP F + Y +P + D+ +
Sbjct: 6 PEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAKFVSFYDKNFY--- 62
Query: 78 DCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFITIDCGRPVNLVNSA 137
L GK P T + + P+ + C
Sbjct: 63 -----------------MLDVEGKHPVITNKLDFPLDQSMIDESTCVLHC---------- 95
Query: 138 NGLLCLRTFGFPHDRALYYICNPLSAELMVLPIAPTP-INQNLRFSAFGYDALTNRYKIL 196
+G LC+ + NP S + I P P I Q+ FGYD + + YK++
Sbjct: 96 DGTLCVTL-----KNHTLMVWNPFSKQ---FKIVPNPGIYQDSNILGFGYDPVHDDYKVV 147
Query: 197 QLVVTSTNQMVAELFQIGDDKWRVIDNNXXXXXXXXXXXXFDPSLNGALHWITQSPRISE 256
+ + A +F+ W ++ L+ L+WI
Sbjct: 148 TF-IDRLDVSTAHVFEFRTGSWG--ESLRISYPDWHYRDRRGTFLDQYLYWIAYRSSADR 204
Query: 257 LICSFDLNKNEFKWVAPPSHFDDDYLNEISGISVGVLKGCLCLC-YVKGSDVFETWLMES 315
I F+L+ +E++ + P Y ++ +GV LC+ Y +ME
Sbjct: 205 FILCFNLSTHEYRKLPLPV-----YNQGVTSSWLGVTSQKLCITEYEMCKKEIRISVMEK 259
Query: 316 YGEVESWTKAFSIDIKSYVGLRPQDKHRPIGFSS 349
G SW+K S+ + S++ ++ + + F S
Sbjct: 260 TG---SWSKIISLSMSSFISVQDRIYDYQVEFVS 290
>AT1G26515.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:9161810-9162910
REVERSE LENGTH=366
Length = 366
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 142/336 (42%), Gaps = 53/336 (15%)
Query: 16 EFPLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYISRAPTTCLVLSDRRYVS 75
+ PL + +IF +LP S+ R T+ + I PSF + R+P C +++ +
Sbjct: 25 QLPLDLEIEIFRRLPLKSVARFLTLSKSCAATIRSPSFITSF--RSPQPCTLIASAPIFN 82
Query: 76 CI---DCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFITIDCGRPVN 132
C+ R+L S +SS ++ S T +SP H + C
Sbjct: 83 CLHPFKPRVLVDHKLSFFSSSSSSSSSTSFLSRLTCPSSPYPRH------MEYYC----- 131
Query: 133 LVNSANGLLCLRTFGFPHDRALYYICNPLSAELMVLPIAPTPINQNLRFSAFGYDALTNR 192
+ NGL+ + G+ ++ + NP + + LP T + L S FGYD +++
Sbjct: 132 --HYVNGLISV---GYGREQI---VTNPSTGRFITLPSVRT--KRRLVKSFFGYDPASDQ 181
Query: 193 YKILQLVVTSTNQM-----VAELFQIGDDK-WRVIDNNXXXXXXXXXXXXFDPSLNGALH 246
YK+L + ++F +G K W+++D ++G ++
Sbjct: 182 YKVLCMTERLYGHQEDPSSQHQVFTLGVKKPWKMLDRTTIPDHRPWTNGV---CIDGVVY 238
Query: 247 WITQSPR-ISEL-ICSFDL---NKNEF----KWVAPPSHFDDDYLNEISGISVGVLKGCL 297
+I ++ + +S+L + +DL N N F + + PS + D LN +G L
Sbjct: 239 YIAKTGQGMSQLSLMRYDLRDDNLNVFISLPEEIRTPSLYSDTLLN---------YEGKL 289
Query: 298 CLCYVKGSDVFETWLMESYGEVESWTKAFSIDIKSY 333
+ S +F+ W+M+ GE W K + +I+ +
Sbjct: 290 AIAIPVTSYIFDVWVMDQDGEKHEWLKKITFNIEPW 325
>AT5G62660.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:25156326-25157465
REVERSE LENGTH=379
Length = 379
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 121/320 (37%), Gaps = 52/320 (16%)
Query: 16 EFPLHILCDIFFKLPAWSLIRCTTVCTAFKNLITDPSFRQLYIS-RAPTTCLVLSDRRYV 74
E PL +L +I KLPA SL+R V + +LI F Y++ + P R Y+
Sbjct: 40 EIPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRR----PPRLYM 95
Query: 75 SCIDCRLLCSASNSNHGTSSCLATIGKTPSSTTRSNSPISDHGSRRRFITIDCGRPVNLV 134
S +D LLC++ H + + + + N I+ G R +
Sbjct: 96 SLVD-HLLCNSLMVCHYPCESVLLSSSSSAESLEQNLTIAGMGGRNMVV----------- 143
Query: 135 NSANGLLCLRTFGFPHDRALYYIC------NPLSAELMVLPIAPTPI-----NQNLRFSA 183
GL+ LY +C NP + + + LP + I + N
Sbjct: 144 --LRGLI------------LYVVCRTASIYNPTTRQSVTLPAVKSNILAQKSHWNSLLYF 189
Query: 184 FGYDALTNRYKILQLVVTSTNQMVAELFQIGDDKWRVIDNNXXXXXXXXXXXXFDPS--- 240
FGYD + ++YK VV + L +I + W + P+
Sbjct: 190 FGYDPVLDQYK----VVCTVALFSKRLKRITSEHWVFVLEPGGSWKRIEFDQPHLPTRLG 245
Query: 241 --LNGALHWITQSPRISELICSFDLNKNEFKWVAPPSHFDDDYLNEISGISVGVLKGCLC 298
+NG ++++ + + +++ SFD+ EF + P + + I G
Sbjct: 246 LCVNGVIYYLASTWKRRDIVVSFDVRSEEFSMIQGPLKV-SAFSESVGFIEYGGKPAVFD 304
Query: 299 LCYVKGSDVFETWLMESYGE 318
+K + + + W++E G+
Sbjct: 305 YTMMKQTGLVDLWVLEDAGK 324
>AT4G17780.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr4:9880259-9881455
REVERSE LENGTH=398
Length = 398
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 183 AFGYDALTNRYKILQLVVTSTNQMVAE-------LFQIGDDKWRVIDNNXXXXXXXXXXX 235
FG D +T YK++++ + S +++ A + + +WR++
Sbjct: 150 GFGKDKVTGSYKVVKMCLISFSEICARDPEVEYSVLDVETGEWRMLSPPPYKVFEVRKSE 209
Query: 236 XFDPSLNGALHWITQSPRISELICSFDLNKNEFKWVAPPSHFDDDYLNEISGISVGVLKG 295
NG+++W+ + + I + DL+K E ++ P D E I +
Sbjct: 210 ----CANGSIYWLHKPTERAWTILALDLHKEELHNISVP---DMSVTQETFQIVNLEDRL 262
Query: 296 CLCLCYVKGSDVFETWLMESYGEVESWTKAFSIDIKSYVGLRPQDKH--RPIGFSSSGAM 353
+ Y K E W M++ EVE+WTK +SID+++ V R + P+ S G +
Sbjct: 263 AIANTYTKTEWKLEIWSMDT--EVETWTKTYSIDLENRVASRERRNRWFTPVSVSKQGNI 320
Query: 354 LL 355
+
Sbjct: 321 VF 322