Miyakogusa Predicted Gene

Lj4g3v0014220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0014220.1 Non Chatacterized Hit- tr|I1L3L8|I1L3L8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,43.14,6e-17,ATPases
associated with a variety of ce,AAA+ ATPase domain; C-terminal,
D2-small domain, of ClpB pr,,gene.g51420.t1.1
         (526 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53350.1 | Symbols: CLPX | CLP protease regulatory subunit X ...   435   e-122
AT1G33360.1 | Symbols:  | ATP-dependent Clp protease | chr1:1209...   422   e-118
AT5G49840.1 | Symbols:  | ATP-dependent Clp protease | chr5:2025...   419   e-117

>AT5G53350.1 | Symbols: CLPX | CLP protease regulatory subunit X |
           chr5:21644060-21647503 FORWARD LENGTH=579
          Length = 579

 Score =  435 bits (1119), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/373 (61%), Positives = 273/373 (73%), Gaps = 46/373 (12%)

Query: 183 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSSDQ-------DTDLVQPEK 235
           I   LN+FV+GQE+ KK+LSVAVYNHY R+   ++Q  S            D D+V+ EK
Sbjct: 164 ICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEK 223

Query: 236 SNVLLIGPTGSGKTLLAKTLARIVNVPFAIADATTFTQE-----------------ADFD 278
           SN+LL+GPTGSGKTLLAKTLAR VNVPF IADATT TQ                  AD++
Sbjct: 224 SNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYN 283

Query: 279 VELAQRGIVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVVSVPDKGARKHQS 338
           V  AQ+GIVY+DEVDKITKK ESLNI RDVSGEGVQQALLKMLE T+V+VP+KGARKH  
Sbjct: 284 VAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPR 343

Query: 339 GDSVLIDTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMRACGLPDAAVTSSLL 398
           GD++ IDTK+ILFICGGAFV++EK ISER+ DSSIGFG PVRANMRA G+ +AAV S+L+
Sbjct: 344 GDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLM 403

Query: 399 ENVESGDLIAYGLIPEFVGRFPILAGLSALSEDQLLQ---------------------VN 437
           E VES DLIAYGLIPEFVGRFP+L  LSAL+E+QL+Q                     V 
Sbjct: 404 ETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVK 463

Query: 438 LHFTDNALRLIAKKAMAKNTGARGLRALLENILTEAMFEVPDKADIGN-IEGVLVDEEAV 496
           LHFT++ALRLIA+KA+ KNTGARGLRALLE+IL ++M+E+PD+    + IE V+VDEEAV
Sbjct: 464 LHFTESALRLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAV 523

Query: 497 GSLNGHGCGAKIL 509
                 G GAKIL
Sbjct: 524 EGEGRRGSGAKIL 536


>AT1G33360.1 | Symbols:  | ATP-dependent Clp protease |
           chr1:12092111-12095789 FORWARD LENGTH=656
          Length = 656

 Score =  422 bits (1084), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/370 (61%), Positives = 267/370 (72%), Gaps = 40/370 (10%)

Query: 183 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSSD-QDTDLVQPEKSNVLLI 241
           I   L++FV+GQ + KK+LSVAVYNHY R+   + +  S +    D D V+ +KSNVLL+
Sbjct: 255 ICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQPIDDDDNVELDKSNVLLM 314

Query: 242 GPTGSGKTLLAKTLARIVNVPFAIADATTFTQE-----------------ADFDVELAQR 284
           GPTGSGKTLLAKTLAR+VNVPF IADATT TQ                  A+F+V+ AQ+
Sbjct: 315 GPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQ 374

Query: 285 GIVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVVSVPDKGARKHQSGDSVLI 344
           GIVY+DEVDKITKK ESLNI RDVSGEGVQQALLK+LE T+V+VP KGARKH  GD + I
Sbjct: 375 GIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQI 434

Query: 345 DTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMRACGLPDAAVTSSLLENVESG 404
           DTK+ILFICGGAFV+LEK I +R+QDSSIGFG PVRANM   G+   A+TSSLLE+VES 
Sbjct: 435 DTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESA 494

Query: 405 DLIAYGLIPEFVGRFPILAGLSALSEDQLLQ---------------------VNLHFTDN 443
           DL AYGLIPEFVGRFPIL  LSAL+EDQL++                     V LHFT+ 
Sbjct: 495 DLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEK 554

Query: 444 ALRLIAKKAMAKNTGARGLRALLENILTEAMFEVP-DKADIGNIEGVLVDEEAVGSLNGH 502
           AL +I+K+AM KNTGARGLRALLE+ILTEAMFE+P DK     I+ V+VDEE+  S    
Sbjct: 555 ALEIISKQAMVKNTGARGLRALLESILTEAMFEIPDDKKGDERIDAVIVDEESTSSEASR 614

Query: 503 GCGAKILYRD 512
           GC AKIL  D
Sbjct: 615 GCTAKILRGD 624



 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 13/105 (12%)

Query: 60  QRRHKWEXXXXXXXXXXXXXIVYYDHIRADMNCPRCSRNMSVIFSNRPLSISG--HQPGL 117
           Q R K E              V    +RA+ NCPRCS+ M ++FSNR    S    +P  
Sbjct: 40  QERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDD 99

Query: 118 -----------YQALNLCPSCKTAFYFRPLKLSPLHGTFIEIARL 151
                      +Q++N CP+CKTA+ F P  +SPL GTFIEI R+
Sbjct: 100 SDSSGAGDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRV 144


>AT5G49840.1 | Symbols:  | ATP-dependent Clp protease |
           chr5:20255243-20259035 FORWARD LENGTH=608
          Length = 608

 Score =  419 bits (1076), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/380 (60%), Positives = 272/380 (71%), Gaps = 49/380 (12%)

Query: 183 IFNALNQFVVGQEKPKKLLSVAVYNHYIRLRLATTQPESQSS-------DQDTDLVQPEK 235
           I   L++FV+GQEK KK+LSVAVYNHY R+  A+ +  S S        D + D V+ +K
Sbjct: 203 ICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNIDHVELDK 262

Query: 236 SNVLLIGPTGSGKTLLAKTLARIVNVPFAIADATTFTQ-----------------EADFD 278
           SNVLL+GPTGSGKTLLAKTLARIVNVPFAIADAT+ TQ                 EA  +
Sbjct: 263 SNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLYVEAGCN 322

Query: 279 VELAQRGIVYVDEVDKITKKGESLNIGRDVSGEGVQQALLKMLESTVVSVP--DKGARKH 336
           VE AQRGIVY+DEVDK+T K  S N GRDVSGEGVQQ+LLK+LE TVVSVP  +KG R+ 
Sbjct: 323 VEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPEKGLRRD 382

Query: 337 QSGDSVLIDTKNILFICGGAFVNLEKIISERKQDSSIGFGVPVRANMRACGLPDAAVTSS 396
             GDS+ +DTK+ILFICGGAF++LEK +SER+ D+SIGFG  VR NM   GL  AAVTSS
Sbjct: 383 PRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSSAAVTSS 442

Query: 397 LLENVESGDLIAYGLIPEFVGRFPILAGLSALSEDQLLQ--------------------- 435
           LLE+++S DL+AYGLIPEFVGR PIL  LSAL+EDQL+Q                     
Sbjct: 443 LLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNN 502

Query: 436 VNLHFTDNALRLIAKKAMAKNTGARGLRALLENILTEAMFEVPDKADIG--NIEGVLVDE 493
           V L FT+ A RLIA+KAM+KNTGARGLR++LE+ILTEAMFEVPD    G  +I+ VLVDE
Sbjct: 503 VQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEVPDSITEGSQSIKAVLVDE 562

Query: 494 EAVGSLNGHGCGAKILYRDN 513
           EAVGS+   GCGAKIL  DN
Sbjct: 563 EAVGSVGSPGCGAKILKGDN 582



 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 58/70 (82%)

Query: 83  YDHIRADMNCPRCSRNMSVIFSNRPLSISGHQPGLYQALNLCPSCKTAFYFRPLKLSPLH 142
           YDHIR+D+NCPRCS  M VIFSNRPLS++  +PG+YQA+N C  CKTAFYFRP KLSPL 
Sbjct: 74  YDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREPGIYQAVNFCSQCKTAFYFRPFKLSPLQ 133

Query: 143 GTFIEIARLN 152
           G+FIE+ ++ 
Sbjct: 134 GSFIELGKVK 143