Miyakogusa Predicted Gene

Lj4g3v0002130.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0002130.2 tr|A8JF64|A8JF64_CHLRE Mitotic checkpoint protein
MAD1 OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_15,30.56,1e-18,coiled-coil,NULL; seg,NULL; SUBFAMILY NOT
NAMED,NULL; MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN
MA,CUFF.46349.2
         (387 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49880.1 | Symbols:  | mitotic checkpoint family protein | ch...   504   e-143

>AT5G49880.1 | Symbols:  | mitotic checkpoint family protein |
           chr5:20282305-20287775 FORWARD LENGTH=726
          Length = 726

 Score =  504 bits (1297), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 254/390 (65%), Positives = 311/390 (79%), Gaps = 4/390 (1%)

Query: 1   MKMLEDQMSSWRSMIKNIPGVSCFEDLSDKIAALQKEVISSTQKEGDGTAHLKQLEVALD 60
           M+ LE+++SSW+S++ +IPGVSC +D+  + + LQ EV+ ST K G+ +  +KQLE  L+
Sbjct: 336 MEKLENELSSWKSLLNDIPGVSCPDDIVMRFSVLQNEVVQSTMKIGEASTRIKQLEETLE 395

Query: 61  AAEFKKQNAETEAALSKEKAEVLKSEIKQIELMLAAVTEERNKLRNVANS--KSSEAGDE 118
           A +  +QNA +EAAL+KEK+E LK+++K+IE+ML  VTEE+ +L+ V N   KS+  G  
Sbjct: 396 AIQLGRQNAVSEAALAKEKSEALKTDVKRIEVMLTLVTEEKEQLKAVVNELRKSNSEGSV 455

Query: 119 SKCANP--VQELESSLRKKDDCIKELESTLHELRVVNNRQHEEIKLLNEKLHSEARRIKX 176
           S  A+   +Q  ESSL KK++ IK+LE  L++L+ VNNRQ  EI+LLNEKL  EARR K 
Sbjct: 456 SGAADGALIQGFESSLAKKENYIKDLEQDLNQLKDVNNRQRTEIELLNEKLVDEARRNKS 515

Query: 177 XXXXXXXXXXXXXXXXAKLGHGDFSAANTKVLRMVNTLTVDNEAKQTIEALQTELQKTKE 236
                           +KLGHGD+SAANT+VLRMVNTL V+NEAKQTIEALQ ELQKTKE
Sbjct: 516 LERDSDRLRSEISLLESKLGHGDYSAANTRVLRMVNTLGVENEAKQTIEALQAELQKTKE 575

Query: 237 KLKAVEELKSQSGEAGKLVDSYISDKILQLKEQIATLEKREERYKTVFADRISVFRRACC 296
           +L+AVEELKSQSG+AGKLVDS+I+ KI QLKEQ ATLEKREERYKTVFADRISVFRRACC
Sbjct: 576 RLQAVEELKSQSGDAGKLVDSHITGKIAQLKEQNATLEKREERYKTVFADRISVFRRACC 635

Query: 297 ERFGYKIVMDEHQQPNGIPVTRFTLQSIYAQSDDEKLEFEYESGNTKILVNHYTSQPEVS 356
           E FGYKIVMDEHQ+PNGIPVTRFTLQSIYAQSDDEKLEFEYESGNT IL N Y SQ +++
Sbjct: 636 ELFGYKIVMDEHQRPNGIPVTRFTLQSIYAQSDDEKLEFEYESGNTSILNNEYASQGDIA 695

Query: 357 RQVEIFIRKMNSIPAFTANITVESFNRRTL 386
           +Q+EIFIRK NSIPAFTAN+T+ESFNRRTL
Sbjct: 696 KQIEIFIRKFNSIPAFTANLTMESFNRRTL 725