Miyakogusa Predicted Gene

Lj3g3v3754400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3754400.1 Non Chatacterized Hit- tr|D8R8J0|D8R8J0_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.79,0.000000000000006,DUF4149,Domain of unknown function
DUF4149; LATE EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE,NULL;
LATE,CUFF.46321.1
         (406 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22600.1 | Symbols:  | Late embryogenesis abundant protein (L...   230   1e-60
AT1G72100.1 | Symbols:  | late embryogenesis abundant domain-con...   215   4e-56
AT3G62580.1 | Symbols:  | Late embryogenesis abundant protein (L...    64   1e-10

>AT1G22600.1 | Symbols:  | Late embryogenesis abundant protein (LEA)
           family protein | chr1:7987308-7989187 REVERSE LENGTH=385
          Length = 385

 Score =  230 bits (587), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 203/394 (51%), Gaps = 51/394 (12%)

Query: 30  NTIVKEGHRVVVVEYDQDGHQNTKISISPP--EPDHSDSNLLDNARDKIKEAASVFPNMP 87
           + IV++GHRVVVVEYD+DG  NT++ ISPP  E D    +  +   ++ +E AS  P   
Sbjct: 26  DIIVRDGHRVVVVEYDRDGETNTRVLISPPGKEVDQKSRDEGEVFGNEKRETASSLP--- 82

Query: 88  GTGMAGSSSSHSQDAFLHA-PKDLICDAYGRCKHKIADAMGKAKDK-------------- 132
                       ++   HA P +LICDA G+CKHK+   +G+ KD+              
Sbjct: 83  ----------EEEEREHHATPGELICDAIGKCKHKLGTVLGRVKDRTASDLSDETPEMTV 132

Query: 133 AQEAIEKKKDIDGAVADAVGKAKDTVYDKAKETVEKGMDTGQTMKDHVVRNVSQATHTVK 192
           A+EA+E ++ +     +A GK  +    KA   V+K           V+  V  A   + 
Sbjct: 133 AREALEVEEKVSWKAREARGKVNERATKKAHR-VQK-----------VLEKVQIAVRGIG 180

Query: 193 RFASTALGPLDSSVMGVANLLGFATAYGMCVWITFISSYVLSKAMPRQQFVVVQSKIYPV 252
              +TALG   + +  V  ++G A AYGMCVW+TF+S YVL+  +  QQF VVQSK+YPV
Sbjct: 181 TVVATALGL--TKIGSVVGIVGIAAAYGMCVWVTFVSGYVLASVLGEQQFGVVQSKMYPV 238

Query: 253 YFRAMAYTVGIALLGHVLGHRNTLFTSKPQMLQAYNLLASLLTIFFNSLYLEPRATKVMF 312
           YF+A++  + + LLGHV+G R  +FT    M Q+ NLL+S+L +  N+ ++  RATK MF
Sbjct: 239 YFKAVSVGILVGLLGHVIGRRRKVFTDAVDMWQSVNLLSSILMVEANASFVYTRATKAMF 298

Query: 313 ERMKLEKEEGRGREDISGSTQEHERXXXXXXXXXXXXXAVLSPAQGHDAVGSRMIKLNNK 372
           E +K EKE+GRG  D S  +Q  E                ++     D V  R+ KL+ +
Sbjct: 299 ELIKAEKEDGRGF-DTSDQSQSSESAGRTRGKKK------VTEKTDEDVVKQRLTKLSER 351

Query: 373 LKRXXXXXXXXXXXXXXXXTWHLVYLAQRVHSAC 406
           +++                TWH VYL  R+   C
Sbjct: 352 MRKLNAYSSRLNLLTLMSLTWHFVYLGYRLSLTC 385


>AT1G72100.1 | Symbols:  | late embryogenesis abundant
           domain-containing protein / LEA domain-containing
           protein | chr1:27127250-27128811 FORWARD LENGTH=480
          Length = 480

 Score =  215 bits (548), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 159/492 (32%), Positives = 219/492 (44%), Gaps = 134/492 (27%)

Query: 19  MFSPTPPKQGANT--------IVKEGHRVVVVEYDQDGHQNTKISISPPEPDHSD----- 65
           ++SP+P     NT        IVK+GH VVVVEYD+DG  NT++SISPP  D  +     
Sbjct: 19  VWSPSPAMTTHNTAVASEGEVIVKDGHHVVVVEYDRDGKTNTRVSISPPSADQGEEKENE 78

Query: 66  ----SNLLDNARDKIKEAASVFPNMPGTGMAGSSSSHSQDAFLHAPKDLICDAYG----- 116
               +++  N ++K KE AS  P++ G G++    +           ++ICDA+G     
Sbjct: 79  VEMGTSMFRNVKEKAKETASYLPHV-GQGISQPVMTDEARDHHATAGEVICDAFGKCRQK 137

Query: 117 ------RCKHKIADAMGKAKDKAQEAIEKK------------KDIDGAVAD----AVGK- 153
                 R K +  D++G+     +EA   K            +D++  VAD    A G+ 
Sbjct: 138 IASVVGRAKDRTVDSVGETASDVREAAAHKAHDVKETVTHAARDVEDTVADQAQYAKGRV 197

Query: 154 -----------------AKDTVYDKA---KETV------------EKGMDTGQTM----- 176
                            AK++V DKA   KE+V            EK  D  +T+     
Sbjct: 198 TEKAHDPKEGVAHKAHDAKESVADKAHDAKESVAQKAHDAKEKVREKAHDVKETVAQKAH 257

Query: 177 ------KDHVVRNVSQ----ATHTVK-----------RFASTALGPLD-SSVMGVANLLG 214
                 KD V     +    ATH  K            F S     L  + V  +  L G
Sbjct: 258 ESKERAKDRVREKAQELKETATHKSKNAWERVKNGAREFGSATAATLSPTKVASIVGLTG 317

Query: 215 FATAYGMCVWITFISSYVLSKAMPRQQFVVVQSKIYPVYFRAMAYTVGIALLGHVLGHRN 274
            A A+G  VW+TF+SSYVL+  + RQQF VVQSK+YPVYF+A +  + + L GHVL  R 
Sbjct: 318 IAAAFGTSVWVTFVSSYVLASVLGRQQFGVVQSKLYPVYFKATSVGILVGLFGHVLSRRR 377

Query: 275 TLFTSKPQMLQAYNLLASLLTIFFNSLYLEPRATKVMFERMKLEKEEGRGREDISGSTQE 334
            L T   +M Q  NLL+S   I  N  ++EPRATK MFERMK EKEEGRG E    S QE
Sbjct: 378 KLLTDATEMWQGVNLLSSFFMIEANKSFVEPRATKAMFERMKAEKEEGRGGERT--SEQE 435

Query: 335 HERXXXXXXXXXXXXXAVLSPAQGHDAVGSRMIKLNNKLKRXXXXXXXXXXXXXXXXTWH 394
             R                           ++ +L+ +L +                TWH
Sbjct: 436 LRR---------------------------KLEQLSERLSKLNTYSSWLNILTLMSLTWH 468

Query: 395 LVYLAQRVHSAC 406
            VYL QR+ +AC
Sbjct: 469 FVYLGQRLGAAC 480


>AT3G62580.1 | Symbols:  | Late embryogenesis abundant protein (LEA)
           family protein | chr3:23146931-23147735 FORWARD
           LENGTH=213
          Length = 213

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 7/136 (5%)

Query: 204 SSVMGVANLLGFATAYGMCVWITFISSYVLSKAMPRQQFVVVQSKIYPVYFRAMAYTVGI 263
           S  + +A+LL FATA+G  +W TFI   ++ K +PR QF  +QSK++P YF  +     I
Sbjct: 38  SIFLKLAHLLSFATAWGAALWATFIGGIIMFKNLPRHQFGNLQSKLFPAYFTLVGSCCAI 97

Query: 264 AL--LGHVLGHRNTLFTSKPQMLQAYNLLASLLTIFFNSLYLEPRATKVMFERMKLEKEE 321
           +L   G++   +++    K Q+    +  A  LT   N     P    +M +R K+E+E 
Sbjct: 98  SLSAFGYLHPWKSSSTVEKYQIGFLLSAFAFNLT---NLFVFTPMTIDMMKQRHKVEREN 154

Query: 322 GRGREDISGSTQEHER 337
             G E   G ++  E+
Sbjct: 155 NIGDE--VGWSKNREK 168