Miyakogusa Predicted Gene
- Lj3g3v3752290.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3752290.3 Non Chatacterized Hit- tr|I1LNP6|I1LNP6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,89.27,0,DUF3535,Domain of unknown function DUF3535;
SNF2_N,SNF2-related; HEAT_EZ,NULL; Helicase_C,Helicase, ,CUFF.46318.3
(1978 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 2402 0.0
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 2384 0.0
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 233 1e-60
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 223 1e-57
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 222 2e-57
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 218 3e-56
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 218 3e-56
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 218 4e-56
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 212 2e-54
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 209 2e-53
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 204 5e-52
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 204 6e-52
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 204 6e-52
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 203 9e-52
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 201 4e-51
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 201 6e-51
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 200 8e-51
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 197 5e-50
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 197 8e-50
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 197 9e-50
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 196 2e-49
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 194 4e-49
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 187 6e-47
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 184 4e-46
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 177 6e-44
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 177 8e-44
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 176 1e-43
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 173 9e-43
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 167 6e-41
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 157 6e-38
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 148 4e-35
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 147 1e-34
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 146 1e-34
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 146 1e-34
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 146 1e-34
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 139 3e-32
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 115 2e-25
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 113 2e-24
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 104 7e-22
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 103 1e-21
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 97 2e-19
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 96 2e-19
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 96 4e-19
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 90 2e-17
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 89 4e-17
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 88 8e-17
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 85 4e-16
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 85 5e-16
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 79 2e-14
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 79 4e-14
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 79 5e-14
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 72 5e-12
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 66 2e-10
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 2402 bits (6224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1234/1982 (62%), Positives = 1473/1982 (74%), Gaps = 41/1982 (2%)
Query: 16 DTGSTQATRLTAARQIGDIAKSHPQDLSSLLKKVSQYLRSKNWDTRVAAAHAIGSIAENV 75
DTGSTQATRLTAA+QIGDIAKSHPQDLSSLL+KV +LRSK WDTRVAAAHAIG+I NV
Sbjct: 17 DTGSTQATRLTAAKQIGDIAKSHPQDLSSLLRKVLHHLRSKKWDTRVAAAHAIGAIVLNV 76
Query: 76 KHISLNELITSVVSKISEYGKSCSVEDLCAWPYLQSKI-SGSSFRSFDMNKVLEFGALLA 134
KH SL+EL+ S+ +K+ E G S +V+++ A+ LQSKI + + FRSF+MNKVLEFGALLA
Sbjct: 77 KHPSLSELLNSLATKLGEAGISDNVDEVVAFRNLQSKILANAPFRSFEMNKVLEFGALLA 136
Query: 135 SGGQEYDIGNDNSKNPKERLVRQKQNLRRRLGLDVCEQFMDINDVIRDEDLMAPKFESQI 194
SGGQEYDI NDNSKNP++R+ RQK+NLRRRLGLD+CEQFMD+N++IRDEDL+ K
Sbjct: 137 SGGQEYDILNDNSKNPRDRVARQKKNLRRRLGLDMCEQFMDVNEMIRDEDLIEQKSNVPA 196
Query: 195 NGIDHRVFTSCSVHNIQKMVAKMVPSVKSKWPSARELNLLKRKAKINSKDQTKSWCEDGS 254
NG+ +R++ +CS H+IQ+ V++MVP V S+ PSARELNLLKRKAKI+SKDQ K CE
Sbjct: 197 NGVGNRLYANCSPHHIQQFVSRMVPRVNSRRPSARELNLLKRKAKISSKDQAKGSCEVAD 256
Query: 255 TEASGAQ-NLTSKGICADTVNYGKAFVDANXXXXXXXXXXXXQWPFNTFVEQLIIDMFDP 313
E S + TSK I +D+++ KA + +WPF++FVEQLI+DMFDP
Sbjct: 257 VEMSSSHVASTSKRILSDSLDSSKADIGNEDDIEPDGDG---KWPFHSFVEQLILDMFDP 313
Query: 314 VWEIRHGSVMALREILTHQGASAGV----FKHDSRFGGTLFVELEDKSIPKILKREREID 369
WEIRHGSVMALREIL G SAGV F D+ F E K + + REREID
Sbjct: 314 AWEIRHGSVMALREILMLHGGSAGVSTEEFSSDNGF--------ELKDVLNKVTREREID 365
Query: 370 LNMQVSADESVSNLKKPKLEXXXXXXXXXXXXXXXNEGDIEISICSETHGSDIPLDNVNG 429
LNMQVS +E K+PK+E GD +I++ E +P VNG
Sbjct: 366 LNMQVSENELEPLRKRPKIEDPSKSFIDNTVLEVIG-GDYDINVKDEDAEFLLPPVKVNG 424
Query: 430 KFNGNSVAMDLESPSDSLHDA--YNESANLAEQKGYSDDSNIPSGNPNVLRNLPQNCELM 487
+ + +S ++ P S+ D+ ++E ++AE + +D + P + + +N E++
Sbjct: 425 QTDCSSTKLE---PQSSMDDSTSHSEINHVAEVNNHFEDKSFIE-EPVIPKQQEENLEVL 480
Query: 488 NLVKVARSSWLRNCEFLQDCVIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGATFKYM 547
+LVK AR SW++N EFLQDC IRFLCVLSLDRFGDY+SDQVVAPVRE CAQALGATFKYM
Sbjct: 481 DLVKQARHSWIKNFEFLQDCTIRFLCVLSLDRFGDYISDQVVAPVREACAQALGATFKYM 540
Query: 548 HPALVNETLNILLKMQCRPEWEIRHGSLLGIKYLVAVRQEMLSDLLGRVLPACKSGLEXX 607
+P+L+ ETLNILL+MQ RPEWEIRHGSLLGIKYLVAVRQEML DLLG +LPACK+GLE
Sbjct: 541 NPSLIYETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLQDLLGYILPACKAGLEDS 600
Query: 608 XXXXXXXXXXXXXXXXXXXXXXQGQTLHSIVMXXXXXXXXXXXXSPSTSSVMNLLAEIYS 667
+GQTL SIVM SPSTSS+MNLLAEIYS
Sbjct: 601 DDDVRAVAADALIPAAAAIVSLRGQTLLSIVMLLWDILLELDDLSPSTSSIMNLLAEIYS 660
Query: 668 QEEMIPKMYKVFKLGD------NEIENAXXXXXXXXXEENPYVLSTLAPRLWPFMRHSIT 721
Q++M M++ LG+ NE+ + +E+PY LS LAPRLWPF RH IT
Sbjct: 661 QDDMTLVMHEELSLGEEQNIELNEMGHIESIGERRDVKESPYALSGLAPRLWPFTRHDIT 720
Query: 722 SVRYSAIRTLERLLEAGYKRNMXXXXXXXXXXXXIFGDTLQIVFQNQLLETNEDILQCSE 781
SVR+SAIRTLERLLEAG ++N+ I GDTL+IVFQN LLE+ E+IL+CSE
Sbjct: 721 SVRFSAIRTLERLLEAGCRKNISGQSKSSFWPSSILGDTLRIVFQNLLLESTEEILECSE 780
Query: 782 RVWSLLVQCSVEDLEAAARSYMSSWIELASTPFGSALDSSKMYWPVAFPRKSQLRAAAKM 841
RVW LLVQC V+DLE A+ YM+SWIELA+TP+GS LD++KM+WPVA PRKS +AAAKM
Sbjct: 781 RVWRLLVQCPVDDLEDTAKFYMASWIELAATPYGSTLDATKMFWPVAPPRKSHFKAAAKM 840
Query: 842 RAVKIGNEYGGDPGLDSTKLTILQDKNRDVALNSVKIVVGADMDTSVTHTRVVTATALGI 901
+AVK+ NE G D + + +K D + S KI+VG+DM+ SVT TRVVTA+ALGI
Sbjct: 841 KAVKLENEASSILGFDYARSSASLEKQEDASARSTKIIVGSDMEMSVTRTRVVTASALGI 900
Query: 902 FASKLPEGSLKYVIDPLWSSLTSLSGVQRQVASMILISWFKEIKNMSLS----KIPDGIP 957
FAS+L EGS+++V+DPL S+LTS+SGVQRQV S++LISWF+E K + S +P G P
Sbjct: 901 FASRLREGSMQFVVDPLSSTLTSMSGVQRQVGSIVLISWFRETKCKAPSDGSGSLP-GFP 959
Query: 958 XXXXXXXXXXXXCSDPAFPTKGSHLPYAELSRTYSKMRGEAGQLLNAVKSSGMFNELLET 1017
C+DPAFPTK LPYAELSRTY+KMR EA QLL+ V++ F++LL T
Sbjct: 960 SPLKKWLLDLLACADPAFPTKDIFLPYAELSRTYTKMRNEASQLLHTVETCHCFDKLLST 1019
Query: 1018 TKIELDSVSVDDAIGFASKIPAFCNDSSTNESLGKNTMDDIESSKQRLLTTASYLKCVQS 1077
K+ ++SV+ D+ I FAS + + +S+ NESL K +D+ESS+Q+LL+TA YLKCVQS
Sbjct: 1020 NKLNVESVTADETIDFASTLDLWNKESAGNESLEKQVFEDVESSRQQLLSTAGYLKCVQS 1079
Query: 1078 NLHXXXXXXXXXXXXWMAQFPTRLTPIILPLMASVKREQEEIIQVKSAEALAELMYHCVT 1137
NLH WM++FP RL PIILPLMAS+KREQE+I+Q +AEALAEL+ +CV
Sbjct: 1080 NLHITVTSLVAAAVVWMSEFPARLNPIILPLMASIKREQEQILQQIAAEALAELIAYCVD 1139
Query: 1138 RRPCPNDKLIKNICSLTCMDPSETPQAKSICSIESIDDQGLLSFKTPVSKQKSKVHVLAG 1197
R+P PNDKLIKNICSLTCMDPSETPQA I S++ +DD LS ++ KQK+KV + +G
Sbjct: 1140 RKPSPNDKLIKNICSLTCMDPSETPQASIISSMDIVDDMDFLSSRSNTGKQKAKVVLASG 1199
Query: 1198 EDRSKVEGFIXXXXXXXXXXXXCEKFGALLFDKLPKLWDCLTEVLKPSSSESLLATNEKQ 1257
EDRSKVEGFI KFG LFDKLPKLW+CLTEVL P + +++++
Sbjct: 1200 EDRSKVEGFITRRGSELALKHLSLKFGGSLFDKLPKLWECLTEVLVPE-----IPSDQQK 1254
Query: 1258 VTAAIESICDPQTLINNIQVVRSVAPMXXXXXXXXXXXXXXCIFKCVQHSHVAVRLAASR 1317
+ IESI DPQ LINNIQVVRS+AP+ CIFKCV+HSHVAVRLAASR
Sbjct: 1255 IDLKIESISDPQVLINNIQVVRSIAPVMEETLKPRLLSLLPCIFKCVRHSHVAVRLAASR 1314
Query: 1318 CITSMAHSMKVKVMGAVVENAIPMLEDASSVHARQGAGMLINFLVQGLGVEXXXXXXXXX 1377
C+ +MA SM VM AVVE+AIPML D + + RQGAGMLI LVQGLGVE
Sbjct: 1315 CVMTMAKSMTTDVMAAVVESAIPMLGDLTCISGRQGAGMLIGLLVQGLGVELVPYSPLLV 1374
Query: 1378 XXXXRCMSDCDQSVRKSVTHSFAALVPLLPLARGLPQPIGLGEGVSRNAEDLHFLEQLLD 1437
RCMSD D SVR+SVT SFAALVP+LPLARG+P P+GL + +S NAED FLEQLLD
Sbjct: 1375 VPLLRCMSDVDSSVRQSVTRSFAALVPMLPLARGVPPPVGLSKDLSSNAEDAKFLEQLLD 1434
Query: 1438 NSHIEDYELCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDI 1497
NSHI+DY+LCTELKV LRRYQQEGINWL FLKRFKLHGILCDDMGLGKTLQASAIVASD
Sbjct: 1435 NSHIDDYKLCTELKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDA 1494
Query: 1498 AEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFC 1557
AE R D+ PS+I+CPSTLVGHWAFEIEKYID+S++S LQYVGSA DR+ LR+ F
Sbjct: 1495 AERRGSTDELDVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFN 1554
Query: 1558 KHNVIITSYDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGT 1617
HNVIITSYDVVRKD+DYL Q WNYCILDEGHIIKNAKSK+T AVKQLKAQHRLILSGT
Sbjct: 1555 NHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGT 1614
Query: 1618 PIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHK 1677
PIQNNIM+LWSLFDFLMPGFLGTERQFQ +YGKPLLA+RDPKCSAKDAEAG LAMEALHK
Sbjct: 1615 PIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHK 1674
Query: 1678 QVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPA 1737
QVMPFLLRRTK+EVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGS AKQE+SS++ + A
Sbjct: 1675 QVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSA 1734
Query: 1738 -AAEGSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISEL 1796
+ TKA++HVFQALQYLLKLCSHPLLV G K+ + ++ + + SD+I+EL
Sbjct: 1735 DSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITEL 1794
Query: 1797 HKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTH 1856
HK+ HSPKLVAL EILEECGIG DAS S+GT+S+GQHRVLIFAQHKA LDIIE+DLFQ H
Sbjct: 1795 HKVQHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAH 1854
Query: 1857 MKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDW 1916
MK+VTY+RLDGSV PEKRFEIVKAFNSDPTIDV SADTLVF+EHDW
Sbjct: 1855 MKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDW 1914
Query: 1917 NPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINSENASMKT 1976
NPMRDHQAMDRAHRLGQK+VVNVHRLIMRGTLEEKVMSLQ+FK+SVAN VIN+ENASMKT
Sbjct: 1915 NPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKT 1974
Query: 1977 MN 1978
MN
Sbjct: 1975 MN 1976
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 2384 bits (6179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1234/2013 (61%), Positives = 1473/2013 (73%), Gaps = 72/2013 (3%)
Query: 16 DTGSTQATRLTAARQIGDIAKSHPQDLSSLLKKVSQYLRSKNWDTRVAAAHAIGSIAENV 75
DTGSTQATRLTAA+QIGDIAKSHPQDLSSLL+KV +LRSK WDTRVAAAHAIG+I NV
Sbjct: 17 DTGSTQATRLTAAKQIGDIAKSHPQDLSSLLRKVLHHLRSKKWDTRVAAAHAIGAIVLNV 76
Query: 76 KHISLNELITSVVSKISEYGKSCSVEDLCAWPYLQSKI-SGSSFRSFDMNKVLEFGALLA 134
KH SL+EL+ S+ +K+ E G S +V+++ A+ LQSKI + + FRSF+MNKVLEFGALLA
Sbjct: 77 KHPSLSELLNSLATKLGEAGISDNVDEVVAFRNLQSKILANAPFRSFEMNKVLEFGALLA 136
Query: 135 SGGQ-------------------------------EYDIGNDNSKNPKERLVRQKQNLRR 163
SGGQ EYDI NDNSKNP++R+ RQK+NLRR
Sbjct: 137 SGGQAFITKNILCQLQPVKLFPTVSLFDLKKFYGLEYDILNDNSKNPRDRVARQKKNLRR 196
Query: 164 RLGLDVCEQFMDINDVIRDEDLMAPKFESQINGIDHRVFTSCSVHNIQKMVAKMVPSVKS 223
RLGLD+CEQFMD+N++IRDEDL+ K NG+ +R++ +CS H+IQ+ V++MVP V S
Sbjct: 197 RLGLDMCEQFMDVNEMIRDEDLIEQKSNVPANGVGNRLYANCSPHHIQQFVSRMVPRVNS 256
Query: 224 KWPSARELNLLKRKAKINSKDQTKSWCEDGSTEASGAQ-NLTSKGICADTVNYGKAFVDA 282
+ PSARELNLLKRKAKI+SKDQ K CE E S + TSK I +D+++ KA +
Sbjct: 257 RRPSARELNLLKRKAKISSKDQAKGSCEVADVEMSSSHVASTSKRILSDSLDSSKADIGN 316
Query: 283 NXXXXXXXXXXXXQWPFNTFVEQLIIDMFDPVWEIRHGSVMALREILTHQGASAGV---- 338
+WPF++FVEQLI+DMFDP WEIRHGSVMALREIL G SAGV
Sbjct: 317 EDDIEPDGDG---KWPFHSFVEQLILDMFDPAWEIRHGSVMALREILMLHGGSAGVSTEE 373
Query: 339 FKHDSRFGGTLFVELEDKSIPKILKREREIDLNMQVSADESVSNLKKPKLEXXXXXXXXX 398
F D+ F E K + + REREIDLNMQVS +E K+PK+E
Sbjct: 374 FSSDNGF--------ELKDVLNKVTREREIDLNMQVSENELEPLRKRPKIEDPSKSFIDN 425
Query: 399 XXXXXXNEGDIEISICSETHGSDIPLDNVNGKFNGNSVAMDLESPSDSLHDA--YNESAN 456
GD +I++ E +P VNG+ + +S ++ P S+ D+ ++E +
Sbjct: 426 TVLEVIG-GDYDINVKDEDAEFLLPPVKVNGQTDCSSTKLE---PQSSMDDSTSHSEINH 481
Query: 457 LAEQKGYSDDSNIPSGNPNVLRNLPQNCELMNLVKVARSSWLRNCEFLQDCVIRFLCVLS 516
+AE + +D + P + + +N E+++LVK AR SW++N EFLQDC IRFLCVLS
Sbjct: 482 VAEVNNHFEDKSFIE-EPVIPKQQEENLEVLDLVKQARHSWIKNFEFLQDCTIRFLCVLS 540
Query: 517 LDRFGDYVSDQVVAPVRETCAQALGATFKYMHPALVNETLNILLKMQCRPEWEIRHGSLL 576
LDRFGDY+SDQVVAPVRE CAQALGATFKYM+P+L+ ETLNILL+MQ RPEWEIRHGSLL
Sbjct: 541 LDRFGDYISDQVVAPVREACAQALGATFKYMNPSLIYETLNILLQMQRRPEWEIRHGSLL 600
Query: 577 GIKYLVAVRQEMLSDLLGRVLPACKSGLEXXXXXXXXXXXXXXXXXXXXXXXXQGQTLHS 636
GIKYLVAVRQEML DLLG +LPACK+GLE +GQTL S
Sbjct: 601 GIKYLVAVRQEMLQDLLGYILPACKAGLEDSDDDVRAVAADALIPAAAAIVSLRGQTLLS 660
Query: 637 IVMXXXXXXXXXXXXSPSTSSVMNLLAEIYSQEEMIPKMYKVFKLGD------NEIENAX 690
IVM SPSTSS+MNLLAEIYSQ++M M++ LG+ NE+ +
Sbjct: 661 IVMLLWDILLELDDLSPSTSSIMNLLAEIYSQDDMTLVMHEELSLGEEQNIELNEMGHIE 720
Query: 691 XXXXXXXXEENPYVLSTLAPRLWPFMRHSITSVRYSAIRTLERLLEAGYKRNMXXXXXXX 750
+E+PY LS LAPRLWPF RH ITSVR+SAIRTLERLLEAG ++N+
Sbjct: 721 SIGERRDVKESPYALSGLAPRLWPFTRHDITSVRFSAIRTLERLLEAGCRKNISGQSKSS 780
Query: 751 XXXXXIFGDTLQIVFQNQLLETNEDILQCSERVWSLLVQCSVEDLEAAARSYMSSWIELA 810
I GDTL+IVFQN LLE+ E+IL+CSERVW LLVQC V+DLE A+ YM+SWIELA
Sbjct: 781 FWPSSILGDTLRIVFQNLLLESTEEILECSERVWRLLVQCPVDDLEDTAKFYMASWIELA 840
Query: 811 STPFGSALDSSKMYWPVAFPRKSQLRAAAKMRAVKIGNEYGGDPGLDSTKLTILQDKNRD 870
+TP+GS LD++KM+WPVA PRKS +AAAKM+AVK+ NE G D + + +K D
Sbjct: 841 ATPYGSTLDATKMFWPVAPPRKSHFKAAAKMKAVKLENEASSILGFDYARSSASLEKQED 900
Query: 871 VALNSVKIVVGADMDTSVTHTRVVTATALGIFASKLPEGSLKYVIDPLWSSLTSLSGVQR 930
+ S KI+VG+DM+ SVT TRVVTA+ALGIFAS+L EGS+++V+DPL S+LTS+SGVQR
Sbjct: 901 ASARSTKIIVGSDMEMSVTRTRVVTASALGIFASRLREGSMQFVVDPLSSTLTSMSGVQR 960
Query: 931 QVASMILISWFKEIKNMSLS----KIPDGIPXXXXXXXXXXXXCSDPAFPTKGSHLPYAE 986
QV S++LISWF+E K + S +P G P C+DPAFPTK LPYAE
Sbjct: 961 QVGSIVLISWFRETKCKAPSDGSGSLP-GFPSPLKKWLLDLLACADPAFPTKDIFLPYAE 1019
Query: 987 LSRTYSKMRGEAGQLLNAVKSSGMFNELLETTKIELDSVSVDDAIGFASKIPAFCNDSST 1046
LSRTY+KMR EA QLL+ V++ F++LL T K+ ++SV+ D+ I FAS + + +S+
Sbjct: 1020 LSRTYTKMRNEASQLLHTVETCHCFDKLLSTNKLNVESVTADETIDFASTLDLWNKESAG 1079
Query: 1047 NESLGKNTMDDIESSKQRLLTTASYLKCVQSNLHXXXXXXXXXXXXWMAQFPTRLTPIIL 1106
NESL K +D+ESS+Q+LL+TA YLKCVQSNLH WM++FP RL PIIL
Sbjct: 1080 NESLEKQVFEDVESSRQQLLSTAGYLKCVQSNLHITVTSLVAAAVVWMSEFPARLNPIIL 1139
Query: 1107 PLMASVKREQEEIIQVKSAEALAELMYHCVTRRPCPNDKLIKNICSLTCMDPSETPQAKS 1166
PLMAS+KREQE+I+Q +AEALAEL+ +CV R+P PNDKLIKNICSLTCMDPSETPQA
Sbjct: 1140 PLMASIKREQEQILQQIAAEALAELIAYCVDRKPSPNDKLIKNICSLTCMDPSETPQASI 1199
Query: 1167 ICSIESIDDQGLLSFKTPVSKQKSKVHVLAGEDRSKVEGFIXXXXXXXXXXXXCEKFGAL 1226
I S++ +DD LS ++ KQK+KV + +GEDRSKVEGFI KFG
Sbjct: 1200 ISSMDIVDDMDFLSSRSNTGKQKAKVVLASGEDRSKVEGFITRRGSELALKHLSLKFGGS 1259
Query: 1227 LFDKLPKLWDCLTEVLKPSSSESLLATNEKQVTAAIESICDPQTLINNIQVVRSVAPMXX 1286
LFDKLPKLW+CLTEVL P + ++++++ IESI DPQ LINNIQVVRS+AP+
Sbjct: 1260 LFDKLPKLWECLTEVLVPE-----IPSDQQKIDLKIESISDPQVLINNIQVVRSIAPVME 1314
Query: 1287 XXXXXXXXXXXXCIFKCVQHSHVAVRLAASRCITSMAHSMKVKVMGAVVENAIPMLEDAS 1346
CIFKCV+HSHVAVRLAASRC+ +MA SM VM AVVE+AIPML D +
Sbjct: 1315 ETLKPRLLSLLPCIFKCVRHSHVAVRLAASRCVMTMAKSMTTDVMAAVVESAIPMLGDLT 1374
Query: 1347 SVHARQGAGMLINFLVQGLGVEXXXXXXXXXXXXXRCMSDCDQSVRKSVTHSFAALVPLL 1406
+ RQGAGMLI LVQGLGVE RCMSD D SVR+SVT SFAALVP+L
Sbjct: 1375 CISGRQGAGMLIGLLVQGLGVELVPYSPLLVVPLLRCMSDVDSSVRQSVTRSFAALVPML 1434
Query: 1407 PLARGLPQPIGLGEGVSRNAEDLHFLEQLLDNSHIEDYELCTELKVTLRRYQQEGINWLA 1466
PLARG+P P+GL + +S NAED FLEQLLDNSHI+DY+LCTELKV LRRYQQEGINWL
Sbjct: 1435 PLARGVPPPVGLSKDLSSNAEDAKFLEQLLDNSHIDDYKLCTELKVQLRRYQQEGINWLG 1494
Query: 1467 FLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSLIICPSTLVGHWAF 1526
FLKRFKLHGILCDDMGLGKTLQASAIVASD AE R D+ PS+I+CPSTLVGHWAF
Sbjct: 1495 FLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPSIIVCPSTLVGHWAF 1554
Query: 1527 EIEKYIDVSVISSLQYVGSAPDRMLLRDNFCKHNVIITSYDVVRKDIDYLGQLFWNYCIL 1586
EIEKYID+S++S LQYVGSA DR+ LR+ F HNVIITSYDVVRKD+DYL Q WNYCIL
Sbjct: 1555 EIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNHNVIITSYDVVRKDVDYLTQFSWNYCIL 1614
Query: 1587 DEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQG 1646
DEGHIIKNAKSK+T AVKQLKAQHRLILSGTPIQNNIM+LWSLFDFLMPGFLGTERQFQ
Sbjct: 1615 DEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQA 1674
Query: 1647 TYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCD 1706
+YGKPLLA+RDPKCSAKDAEAG LAMEALHKQVMPFLLRRTK+EVLSDLPEKIIQDRYCD
Sbjct: 1675 SYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCD 1734
Query: 1707 LSPVQLKLYEQFSGSRAKQEMSSVVTTNEPA-AAEGSSRNTKAASHVFQALQYLLKLCSH 1765
LSPVQLKLYEQFSGS AKQE+SS++ + A + TKA++HVFQALQYLLKLCSH
Sbjct: 1735 LSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSH 1794
Query: 1766 PLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVALHEILEECGIGVDASGSE 1825
PLLV G K+ + ++ + + SD+I+ELHK+ HSPKLVAL EILEECGIG DAS S+
Sbjct: 1795 PLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVALQEILEECGIGSDASSSD 1854
Query: 1826 GTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDP 1885
GT+S+GQHRVLIFAQHKA LDIIE+DLFQ HMK+VTY+RLDGSV PEKRFEIVKAFNSDP
Sbjct: 1855 GTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDP 1914
Query: 1886 TIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMR 1945
TIDV SADTLVF+EHDWNPMRDHQAMDRAHRLGQK+VVNVHRLIMR
Sbjct: 1915 TIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMR 1974
Query: 1946 GTLEEKVMSLQRFKLSVANAVINSENASMKTMN 1978
GTLEEKVMSLQ+FK+SVAN VIN+ENASMKTMN
Sbjct: 1975 GTLEEKVMSLQKFKVSVANTVINAENASMKTMN 2007
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 256/524 (48%), Gaps = 70/524 (13%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSL 1513
LR YQ EG+ W+ L L+GIL D+MGLGKT+Q +++A + P P L
Sbjct: 403 LRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPG------PYL 456
Query: 1514 IICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFC---KHNVIITSYDVVR 1570
I+ P ++ +W E + V I++ Y G +R +R+ K NV+IT YD++
Sbjct: 457 IVAPKAVLPNWVNEFATW--VPSIAAFLYDGRLEERKAIREKIAGEGKFNVLITHYDLIM 514
Query: 1571 KDIDYLGQLFWNYCILDEGHIIKNAKSKVTLA-VKQLKAQHRLILSGTPIQNNIMDLWSL 1629
+D +L ++ W Y I+DEGH +KN +S + + + + RL+L+GTPIQN++ +LWSL
Sbjct: 515 RDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSL 574
Query: 1630 FDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKD 1689
+FL+P + + F+ + P A R S D E L + LH + PF+LRR KD
Sbjct: 575 LNFLLPHIFNSVQNFEEWFNAP-FADRG-NVSLTDEEE-LLIIHRLHHVIRPFILRRKKD 631
Query: 1690 EVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAA 1749
EV LP K CD+S Q Y+Q + +M V GS ++
Sbjct: 632 EVEKFLPGKTQVILKCDMSAWQKVYYKQVT------DMGRV------GLQTGSGKSKSLQ 679
Query: 1750 SHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLV--- 1806
+ Q L K C+HP L GG + + P++V
Sbjct: 680 NLTMQ----LRKCCNHPYLFVGGD-----------------------YNMWKKPEIVRAS 712
Query: 1807 ALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLD 1866
E+L+ + +G HR+L+F+Q +D++E ++ T + + YLRLD
Sbjct: 713 GKFELLDRLLPKLRKAG---------HRILLFSQMTRLIDVLE--IYLT-LNDYKYLRLD 760
Query: 1867 GSVEPEKRFEIVKAFNS-DPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAM 1925
G+ + ++R ++K FN D + +ADT++ + DWNP D QA
Sbjct: 761 GTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAE 820
Query: 1926 DRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINS 1969
DRAHR+GQKK V V L+ G++EE ++ + K+ + VI +
Sbjct: 821 DRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQA 864
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 245/525 (46%), Gaps = 73/525 (13%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSL 1513
LR YQ EG+ W+ L +GIL D+MGLGKT+Q A++A + E + G P L
Sbjct: 386 LRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAY-LLESKDLHG-----PHL 439
Query: 1514 IICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFC--KHNVIITSYDVVRK 1571
I+ P ++ +W E + IS+ Y GS R +R K NV+IT YD++ +
Sbjct: 440 ILAPKAVLPNWENEFALW--APSISAFLYDGSKEKRTEIRARIAGGKFNVLITHYDLIMR 497
Query: 1572 DIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQ-LKAQHRLILSGTPIQNNIMDLWSLF 1630
D +L ++ WNY I+DEGH +KN + + + + + RL+L+GTPIQN++ +LWSL
Sbjct: 498 DKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWSLL 557
Query: 1631 DFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDA--EAGALAMEALHKQVMPFLLRRTK 1688
+FL+P + F+ + P +C + E L + LH + PFLLRR K
Sbjct: 558 NFLLPHIFNSIHNFEEWFNTPF-----AECGSASLTDEEELLIINRLHHVIRPFLLRRKK 612
Query: 1689 DEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKA 1748
EV LP K CD+S Q Y+Q V G+ ++
Sbjct: 613 SEVEKFLPGKTQVILKCDMSAWQKLYYKQ------------VTDVGRVGLHSGNGKSKSL 660
Query: 1749 ASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLV-- 1806
+ Q L K C+HP L G + + P++V
Sbjct: 661 QNLTMQ----LRKCCNHPYLFVGAD-----------------------YNMCKKPEIVRA 693
Query: 1807 -ALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRL 1865
E+L+ + +G HR+L+F+Q +D++E + + YLRL
Sbjct: 694 SGKFELLDRLLPKLKKAG---------HRILLFSQMTRLIDLLE---IYLSLNDYMYLRL 741
Query: 1866 DGSVEPEKRFEIVKAFNS-DPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQA 1924
DGS + ++R ++K FN D + +ADT++ + DWNP D QA
Sbjct: 742 DGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQA 801
Query: 1925 MDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINS 1969
DRAHR+GQKK V V L+ G++EE ++ + K+ + VI +
Sbjct: 802 EDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQA 846
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 254/540 (47%), Gaps = 58/540 (10%)
Query: 1444 YELCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTP 1503
Y L ++ L +Q+EG+NWL L GIL DDMGLGKT+Q + +A H
Sbjct: 367 YTLPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLF--HSKL 424
Query: 1504 IGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRML-LRDNFCKHNVI 1562
I +L++ P TL+ HW E+ + +S ++ Y S R L ++
Sbjct: 425 IKR-----ALVVAPKTLLPHWMKELAT-VGLSQMTREYYGTSTKAREYDLHHILQGKGIL 478
Query: 1563 ITSYDVVRK------------DIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQH 1610
+T+YD+VR D D W+Y ILDEGH+IKN ++ ++ ++ + H
Sbjct: 479 LTTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSH 538
Query: 1611 RLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGAL 1670
R+I+SGTPIQNN+ +LW+LF+F PG LG + F+ Y +L D + ++ G+
Sbjct: 539 RIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGST 598
Query: 1671 AMEALHKQVMPFLLRRTKDEVLSD------LPEKIIQDRYCDLSPVQLKLYEQFSGSRAK 1724
+ L + + PF LRR K EV D L +K + L+ Q +LYE F
Sbjct: 599 VAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLN---- 654
Query: 1725 QEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSE 1784
S +V + A +GS AL L K+C HPLL++ D + S
Sbjct: 655 ---SEIVLS----AFDGSP---------LAALTILKKICDHPLLLTKRAAEDVLEGMDST 698
Query: 1785 LFPAGSDVISELHKLHHSPKLVALHEILEE-----CGIGVDASGSEGTVSIGQHRVLIFA 1839
L + V L H V + + C + S E + G HRVLIF+
Sbjct: 699 LTQEEAGVAERL--AMHIADNVDTDDFQTKNDSISCKLSFIMSLLENLIPEG-HRVLIFS 755
Query: 1840 QHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXX 1899
Q + L++I+ L ++LR+DG+ + R + V+ F +
Sbjct: 756 QTRKMLNLIQDSLTSN---GYSFLRIDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGL 812
Query: 1900 XXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFK 1959
AD ++ V+ WNP D+Q++DRA+R+GQ K V V+RL+ T+EEK+ Q +K
Sbjct: 813 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYK 872
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 258/528 (48%), Gaps = 69/528 (13%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSL 1513
LR YQ G+ WL L L+GIL D+MGLGKT+Q +++ + E + +D P L
Sbjct: 754 LREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICY-LMETK-----NDRGPFL 807
Query: 1514 IICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPD--RMLLRDNFC--KHNVIITSYDVV 1569
++ PS+++ W EI + I + Y G+ PD R L ++ K NV++T+Y+ +
Sbjct: 808 VVVPSSVLPGWQSEINFW--APSIHKIVYCGT-PDERRKLFKEQIVHQKFNVLLTTYEYL 864
Query: 1570 --RKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLW 1627
+ D L ++ W+Y I+DEGH IKNA K+ +K + HRL+L+GTP+QNN+ +LW
Sbjct: 865 MNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELW 924
Query: 1628 SLFDFLMPGFLGTERQFQGTYGKPLLAS--RDPKCSAKDAEAGALAMEALHKQVMPFLLR 1685
+L +FL+P + F + KP ++ + + E L + LH+ + PF+LR
Sbjct: 925 ALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLR 984
Query: 1686 RTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRN 1745
R K +V ++LPEKI + C+ S Y++ R + + GS N
Sbjct: 985 RLKHKVENELPEKIERLIRCEAS-----AYQKLLMKRVEDNL-------------GSIGN 1026
Query: 1746 TKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKL 1805
K+ + V ++ L +C+HP L S+L S+ ++ + H P +
Sbjct: 1027 AKSRA-VHNSVMELRNICNHPYL--------------SQLH---SEEVNNIIPKHFLPPI 1068
Query: 1806 VAL---HEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTY 1862
V L E+L+ + A+ HRVL F+ LD++E L +K Y
Sbjct: 1069 VRLCGKLEMLDRMLPKLKAT---------DHRVLFFSTMTRLLDVMEDYLT---LKGYKY 1116
Query: 1863 LRLDGSVEPEKRFEIVKAFN-SDPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRD 1921
LRLDG R ++ FN S + +ADT++ + DWNP D
Sbjct: 1117 LRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVD 1176
Query: 1922 HQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINS 1969
QA RAHR+GQKK V V R ++EE+V + KL VAN I +
Sbjct: 1177 LQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 218 bits (555), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 258/528 (48%), Gaps = 69/528 (13%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSL 1513
LR YQ G+ WL L L+GIL D+MGLGKT+Q +++ + E + +D P L
Sbjct: 754 LREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICY-LMETK-----NDRGPFL 807
Query: 1514 IICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPD--RMLLRDNFC--KHNVIITSYDVV 1569
++ PS+++ W EI + I + Y G+ PD R L ++ K NV++T+Y+ +
Sbjct: 808 VVVPSSVLPGWQSEINFW--APSIHKIVYCGT-PDERRKLFKEQIVHQKFNVLLTTYEYL 864
Query: 1570 --RKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLW 1627
+ D L ++ W+Y I+DEGH IKNA K+ +K + HRL+L+GTP+QNN+ +LW
Sbjct: 865 MNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELW 924
Query: 1628 SLFDFLMPGFLGTERQFQGTYGKPLLAS--RDPKCSAKDAEAGALAMEALHKQVMPFLLR 1685
+L +FL+P + F + KP ++ + + E L + LH+ + PF+LR
Sbjct: 925 ALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLR 984
Query: 1686 RTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRN 1745
R K +V ++LPEKI + C+ S Y++ R + + GS N
Sbjct: 985 RLKHKVENELPEKIERLIRCEAS-----AYQKLLMKRVEDNL-------------GSIGN 1026
Query: 1746 TKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKL 1805
K+ + V ++ L +C+HP L S+L S+ ++ + H P +
Sbjct: 1027 AKSRA-VHNSVMELRNICNHPYL--------------SQLH---SEEVNNIIPKHFLPPI 1068
Query: 1806 VAL---HEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTY 1862
V L E+L+ + A+ HRVL F+ LD++E L +K Y
Sbjct: 1069 VRLCGKLEMLDRMLPKLKAT---------DHRVLFFSTMTRLLDVMEDYLT---LKGYKY 1116
Query: 1863 LRLDGSVEPEKRFEIVKAFN-SDPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRD 1921
LRLDG R ++ FN S + +ADT++ + DWNP D
Sbjct: 1117 LRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVD 1176
Query: 1922 HQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINS 1969
QA RAHR+GQKK V V R ++EE+V + KL VAN I +
Sbjct: 1177 LQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 218 bits (554), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 258/528 (48%), Gaps = 69/528 (13%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSL 1513
LR YQ G+ WL L L+GIL D+MGLGKT+Q +++ + E + +D P L
Sbjct: 754 LREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICY-LMETK-----NDRGPFL 807
Query: 1514 IICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPD--RMLLRDNFC--KHNVIITSYDVV 1569
++ PS+++ W EI + I + Y G+ PD R L ++ K NV++T+Y+ +
Sbjct: 808 VVVPSSVLPGWQSEINFW--APSIHKIVYCGT-PDERRKLFKEQIVHQKFNVLLTTYEYL 864
Query: 1570 --RKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLW 1627
+ D L ++ W+Y I+DEGH IKNA K+ +K + HRL+L+GTP+QNN+ +LW
Sbjct: 865 MNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELW 924
Query: 1628 SLFDFLMPGFLGTERQFQGTYGKPLLAS--RDPKCSAKDAEAGALAMEALHKQVMPFLLR 1685
+L +FL+P + F + KP ++ + + E L + LH+ + PF+LR
Sbjct: 925 ALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLR 984
Query: 1686 RTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRN 1745
R K +V ++LPEKI + C+ S Y++ R + + GS N
Sbjct: 985 RLKHKVENELPEKIERLIRCEAS-----AYQKLLMKRVEDNL-------------GSIGN 1026
Query: 1746 TKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKL 1805
K+ + V ++ L +C+HP L S+L S+ ++ + H P +
Sbjct: 1027 AKSRA-VHNSVMELRNICNHPYL--------------SQLH---SEEVNNIIPKHFLPPI 1068
Query: 1806 VAL---HEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTY 1862
V L E+L+ + A+ HRVL F+ LD++E L +K Y
Sbjct: 1069 VRLCGKLEMLDRMLPKLKAT---------DHRVLFFSTMTRLLDVMEDYLT---LKGYKY 1116
Query: 1863 LRLDGSVEPEKRFEIVKAFN-SDPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRD 1921
LRLDG R ++ FN S + +ADT++ + DWNP D
Sbjct: 1117 LRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVD 1176
Query: 1922 HQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINS 1969
QA RAHR+GQKK V V R ++EE+V + KL VAN I +
Sbjct: 1177 LQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITA 1224
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 212 bits (540), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 162/547 (29%), Positives = 242/547 (44%), Gaps = 91/547 (16%)
Query: 1457 YQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSLIIC 1516
YQ+ G+ WL L + GI+ D+MGLGKT+Q + + S H + + PS+IIC
Sbjct: 388 YQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGS---LHFSKM----YKPSIIIC 440
Query: 1517 PSTLVGHWAFEIEK-YIDVSVI---SSLQYVGSAP------------------------- 1547
P TL+ W E +K Y D V S Q G
Sbjct: 441 PVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKSK 500
Query: 1548 -----DRMLLRDNFCKHNVIITSYDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLA 1602
D +L R + ++IT+Y+ +R + L + W Y +LDEGH I+N S +TL
Sbjct: 501 NTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLV 560
Query: 1603 VKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSA 1662
KQL+ HR+I++G PIQN + +LWSLFDF+ PG LG F+ + P+ S
Sbjct: 561 CKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASP 620
Query: 1663 KDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSR 1722
L +MP+LLRR K +V + L +K +C L+ Q Y F S
Sbjct: 621 LQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLAS- 679
Query: 1723 AKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIF 1782
E+ + N RN+ + + K+C+H PD
Sbjct: 680 --SEVEQIFDGN---------RNS------LYGIDVMRKICNH---------PDLLEREH 713
Query: 1783 SELFPAGSDVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHK 1842
S P + S K+ + E+L+ +G HRVL+F+Q +
Sbjct: 714 SHQNP-------DYGNPERSGKMKVVAEVLK-------VWKQQG------HRVLLFSQTQ 753
Query: 1843 AFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXX 1902
LDI+E L +Y R+DG ++R ++ FN+ + V
Sbjct: 754 QMLDILESFLVANEY---SYRRMDGLTPVKQRMALIDEFNNSEDMFVFVLTTKVGGLGTN 810
Query: 1903 XXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSV 1962
A+ ++ + DWNP D QA +RA R+GQKK V V+RLI RGT+EEKV Q +K +
Sbjct: 811 LTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFL 870
Query: 1963 ANAVINS 1969
N ++ +
Sbjct: 871 TNKILKN 877
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1 |
chromatin remodeling 1 | chr5:26649050-26652869 FORWARD
LENGTH=764
Length = 764
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 250/534 (46%), Gaps = 63/534 (11%)
Query: 1445 ELCTELKV-TLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTP 1503
ELC L L+ YQ +G+ WL L + L+GIL D MGLGKT+Q ++ H
Sbjct: 192 ELCPLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLS-----HLKG 246
Query: 1504 IGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFC------ 1557
G D P L+I P + + +W EI ++ I+++ Y G R LR
Sbjct: 247 NGLDG--PYLVIAPLSTLSNWFNEIARF--TPSINAIIYHGDKNQRDELRRKHMPKTVGP 302
Query: 1558 KHNVIITSYDVVRKDIDYLGQLF-WNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSG 1616
K ++ITSY+V D + + + W Y ++DEGH +KN K K+ +K LK ++L+L+G
Sbjct: 303 KFPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTG 362
Query: 1617 TPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAG--ALAMEA 1674
TP+QNN+ +LWSL +F++P + +F+ + + ++ + K+ E A +
Sbjct: 363 TPLQNNLSELWSLLNFILPDIFTSHDEFESWFD---FSEKNKNEATKEEEEKRRAQVVSK 419
Query: 1675 LHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTN 1734
LH + PF+LRR K +V LP K Y ++ Q K E V T
Sbjct: 420 LHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHL-----------VNNTL 468
Query: 1735 EPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVIS 1794
E E + R + + L K C+HP L+ G+I S+ L+P
Sbjct: 469 EAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQ-GQIDGSY------LYP------- 514
Query: 1795 ELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQ 1854
+ EI+ +CG + H+VLIF+Q LDI++ +
Sbjct: 515 ------------PVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMD---YY 559
Query: 1855 THMKNVTYLRLDGSVEPEKRFEIVKAFNSDP-TIDVXXXXXXXXXXXXXXXSADTLVFVE 1913
K R+DGSV+ ++R +K F+ + + + +ADT + +
Sbjct: 560 FSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYD 619
Query: 1914 HDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVI 1967
DWNP D QAMDR HR+GQ K V+V+RL ++E +V+ KL + + VI
Sbjct: 620 SDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVI 673
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 149/530 (28%), Positives = 244/530 (46%), Gaps = 72/530 (13%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSL 1513
+R YQ G+NWL L ++GIL D+MGLGKTLQ +++A + E+R G P +
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAY-LHEYRGING-----PHM 242
Query: 1514 IICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFC---KHNVIITSYDVVR 1570
++ P + +G+W EI ++ V+ +++++G+ +R +R++ K ++ +TS+++
Sbjct: 243 VVAPKSTLGNWMNEIRRF--CPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAI 300
Query: 1571 KDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLF 1630
K+ L + W Y I+DE H IKN S ++ ++ +RL+++GTP+QNN+ +LW+L
Sbjct: 301 KEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL 360
Query: 1631 DFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDE 1690
+FL+P + F + + S ++ + + + LHK + PFLLRR K +
Sbjct: 361 NFLLPEIFSSAETFDEWF----------QISGENDQQEVV--QQLHKVLRPFLLRRLKSD 408
Query: 1691 VLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAAS 1750
V LP K +S +Q KQ +++ + A G R
Sbjct: 409 VEKGLPPKKETILKVGMSQMQ------------KQYYKALLQKDLEAVNAGGER-----K 451
Query: 1751 HVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVALHE 1810
+ L K C+HP L G + P P
Sbjct: 452 RLLNIAMQLRKCCNHPYLFQGAE-------------PG--------------PPYTTGDH 484
Query: 1811 ILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVE 1870
++ G V + RVLIF+Q LDI+E L + Y R+DG+
Sbjct: 485 LITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLM---YRGYLYCRIDGNTG 541
Query: 1871 PEKRFEIVKAFNSDPTID-VXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAH 1929
++R ++A+N + V +AD ++ + DWNP D QA DRAH
Sbjct: 542 GDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH 601
Query: 1930 RLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINSEN-ASMKTMN 1978
R+GQKK V V R +EEKV+ KL++ VI A KT+N
Sbjct: 602 RIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVN 651
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 204 bits (519), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/530 (28%), Positives = 244/530 (46%), Gaps = 72/530 (13%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSL 1513
+R YQ G+NWL L ++GIL D+MGLGKTLQ +++A + E+R G P +
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAY-LHEYRGING-----PHM 242
Query: 1514 IICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFC---KHNVIITSYDVVR 1570
++ P + +G+W EI ++ V+ +++++G+ +R +R++ K ++ +TS+++
Sbjct: 243 VVAPKSTLGNWMNEIRRF--CPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAI 300
Query: 1571 KDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLF 1630
K+ L + W Y I+DE H IKN S ++ ++ +RL+++GTP+QNN+ +LW+L
Sbjct: 301 KEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL 360
Query: 1631 DFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDE 1690
+FL+P + F + + S ++ + + + LHK + PFLLRR K +
Sbjct: 361 NFLLPEIFSSAETFDEWF----------QISGENDQQEVV--QQLHKVLRPFLLRRLKSD 408
Query: 1691 VLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAAS 1750
V LP K +S +Q KQ +++ + A G R
Sbjct: 409 VEKGLPPKKETILKVGMSQMQ------------KQYYKALLQKDLEAVNAGGER-----K 451
Query: 1751 HVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVALHE 1810
+ L K C+HP L G + P P
Sbjct: 452 RLLNIAMQLRKCCNHPYLFQGAE-------------PG--------------PPYTTGDH 484
Query: 1811 ILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVE 1870
++ G V + RVLIF+Q LDI+E L + Y R+DG+
Sbjct: 485 LITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLM---YRGYLYCRIDGNTG 541
Query: 1871 PEKRFEIVKAFNSDPTID-VXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAH 1929
++R ++A+N + V +AD ++ + DWNP D QA DRAH
Sbjct: 542 GDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH 601
Query: 1930 RLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINSEN-ASMKTMN 1978
R+GQKK V V R +EEKV+ KL++ VI A KT+N
Sbjct: 602 RIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVN 651
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 204 bits (519), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/530 (28%), Positives = 244/530 (46%), Gaps = 72/530 (13%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSL 1513
+R YQ G+NWL L ++GIL D+MGLGKTLQ +++A + E+R G P +
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAY-LHEYRGING-----PHM 242
Query: 1514 IICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFC---KHNVIITSYDVVR 1570
++ P + +G+W EI ++ V+ +++++G+ +R +R++ K ++ +TS+++
Sbjct: 243 VVAPKSTLGNWMNEIRRF--CPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAI 300
Query: 1571 KDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLF 1630
K+ L + W Y I+DE H IKN S ++ ++ +RL+++GTP+QNN+ +LW+L
Sbjct: 301 KEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL 360
Query: 1631 DFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDE 1690
+FL+P + F + + S ++ + + + LHK + PFLLRR K +
Sbjct: 361 NFLLPEIFSSAETFDEWF----------QISGENDQQEVV--QQLHKVLRPFLLRRLKSD 408
Query: 1691 VLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAAS 1750
V LP K +S +Q KQ +++ + A G R
Sbjct: 409 VEKGLPPKKETILKVGMSQMQ------------KQYYKALLQKDLEAVNAGGER-----K 451
Query: 1751 HVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVALHE 1810
+ L K C+HP L G + P P
Sbjct: 452 RLLNIAMQLRKCCNHPYLFQGAE-------------PG--------------PPYTTGDH 484
Query: 1811 ILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVE 1870
++ G V + RVLIF+Q LDI+E L + Y R+DG+
Sbjct: 485 LITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLM---YRGYLYCRIDGNTG 541
Query: 1871 PEKRFEIVKAFNSDPTID-VXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAH 1929
++R ++A+N + V +AD ++ + DWNP D QA DRAH
Sbjct: 542 GDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH 601
Query: 1930 RLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINSEN-ASMKTMN 1978
R+GQKK V V R +EEKV+ KL++ VI A KT+N
Sbjct: 602 RIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVN 651
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 203 bits (517), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 255/556 (45%), Gaps = 100/556 (17%)
Query: 1450 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDL 1509
LK L YQ EG+N+L F + H IL D+MGLGKT+Q+ A++AS E +L
Sbjct: 269 LKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEE--------NL 320
Query: 1510 LPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDN-------------- 1555
+P L+I P + + +W E + ++ + Y G+A R ++R++
Sbjct: 321 IPHLVIAPLSTLRNWEREFATW--APQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKK 378
Query: 1556 ------------FCKHNVIITSYDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAV 1603
K +V++TSY+++ D L + W I+DEGH +KN SK+ ++
Sbjct: 379 KSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSL 438
Query: 1604 KQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAK 1663
Q + HR++L+GTP+QNN+ +L+ L FL G G+ +FQ + K
Sbjct: 439 TQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF--------------K 484
Query: 1664 DAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRA 1723
D + LHK + P LLRR K +V+ D+P K DLS +Q + Y+
Sbjct: 485 DINQEE-QISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYK------- 536
Query: 1724 KQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFS 1783
++ T N ++ A + + L K+C HP ++ G
Sbjct: 537 -----AIFTRNYQVL----TKKGGAQISLNNIMMELRKVCCHPYMLEG------------ 575
Query: 1784 ELFPAGSDVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKA 1843
V +H + A ++LE CG + HRVLI+ Q +
Sbjct: 576 --------VEPVIHDANE-----AFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQH 622
Query: 1844 FLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDV-XXXXXXXXXXXXX 1902
LD++E + TH K Y R+DG V +R + FN+ +
Sbjct: 623 MLDLLED--YCTH-KKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGIN 679
Query: 1903 XXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSV 1962
+ADT++ + DWNP D QAM RAHRLGQ V ++RLI RGT+EE++M L + K+ +
Sbjct: 680 LATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVL 739
Query: 1963 ANAVINSENASMKTMN 1978
+ V+ +KT N
Sbjct: 740 EHLVV----GKLKTQN 751
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 201 bits (511), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 255/542 (47%), Gaps = 87/542 (16%)
Query: 1447 CTELKVT--LRRYQQEGINWLAFLKRFKLHGIL-CDDMGLGKTLQASAIVASDIAEHRTP 1503
C+E VT L+ +Q EG++WL ++ +L D MGLGKTLQA + ++ P
Sbjct: 42 CSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLP 101
Query: 1504 IGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFCKH---- 1559
P L++CP ++ W EI ++ + L+YVG R+ +R + H
Sbjct: 102 G------PFLVLCPLSVTDGWVSEINRF--TPNLEVLRYVGDKYCRLDMRKSMYDHGHFL 153
Query: 1560 --NVIITSYDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKV-TLAVKQLKAQHRLILSG 1616
+V++T+YD+ D D+L Q+ W Y I+DE +KN S + + ++Q RL+++G
Sbjct: 154 PFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITG 213
Query: 1617 TPIQNNIMDLWSLFDFLMPGFLGTERQFQGTY---GKPLLASRDPKCSAKDAEAGALAME 1673
TPIQNN+ +LW+L F MP GT QF + G L S D + +
Sbjct: 214 TPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLDVSNDKET-----------YK 262
Query: 1674 ALHKQVMPFLLRRTKDEVLSD----LPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSS 1729
+L + F+LRRTK ++ LP L +Q K+Y +S
Sbjct: 263 SLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIY------------TS 310
Query: 1730 VVTTNEPAAAE---GSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELF 1786
++ P E G S +T + V Q L K CSHP L F I E F
Sbjct: 311 ILRKELPGLLELSSGGSNHTSLQNIVIQ----LRKACSHPYL---------FPGIEPEPF 357
Query: 1787 PAGSDVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLD 1846
G H + S KL+ L ++L+ + SG HRVL+F+Q + LD
Sbjct: 358 EEGE------HLVQASGKLLVLDQLLKR----LHDSG---------HRVLLFSQMTSTLD 398
Query: 1847 IIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPT-IDVXXXXXXXXXXXXXXXS 1905
I++ D + ++ +Y RLDGSV E+RF +K F+ D + V +
Sbjct: 399 ILQ-DFME--LRRYSYERLDGSVRAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVA 455
Query: 1906 ADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANA 1965
ADT++F E DWNP D QA+ RAHR+GQ V L+ ++EE ++ KL +++
Sbjct: 456 ADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHN 515
Query: 1966 VI 1967
V+
Sbjct: 516 VV 517
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 201 bits (510), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 147/530 (27%), Positives = 240/530 (45%), Gaps = 72/530 (13%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSL 1513
LR YQ G+NWL L ++GIL D+MGLGKTLQ +++A + E+R G P +
Sbjct: 194 LRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAY-LHEYRGING-----PHM 247
Query: 1514 IICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFC---KHNVIITSYDVVR 1570
++ P + +G+W EI ++ V+ +++++G+ +R +R+ K ++ +TS+++
Sbjct: 248 VVAPKSTLGNWMNEIRRF--CPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAI 305
Query: 1571 KDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLF 1630
K+ L + W Y I+DE H IKN S ++ ++ +RL+++GTP+QNN+ +LW+L
Sbjct: 306 KEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL 365
Query: 1631 DFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDE 1690
+FL+P + F + + S ++ + + + LHK + PFLLRR K +
Sbjct: 366 NFLLPEVFSSAETFDEWF----------QISGENDQQEVV--QQLHKVLRPFLLRRLKSD 413
Query: 1691 VLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAAS 1750
V LP K +S +Q KQ +++ + G R
Sbjct: 414 VEKGLPPKKETILKVGMSQMQ------------KQYYKALLQKDLEVVNGGGER-----K 456
Query: 1751 HVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVALHE 1810
+ L K C+HP L G + P
Sbjct: 457 RLLNIAMQLRKCCNHPYLFQGAE---------------------------PGPPYTTGDH 489
Query: 1811 ILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVE 1870
++ G V + RVLIF+Q LDI+E L + Y R+DG+
Sbjct: 490 LVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLM---YRGYQYCRIDGNTG 546
Query: 1871 PEKRFEIVKAFNSDPTID-VXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAH 1929
++R ++A+N + V +AD ++ + DWNP D QA DRAH
Sbjct: 547 GDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH 606
Query: 1930 RLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINSEN-ASMKTMN 1978
R+GQKK V V R +E KV+ KL++ VI A KT+N
Sbjct: 607 RIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVN 656
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 200 bits (509), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 147/530 (27%), Positives = 240/530 (45%), Gaps = 72/530 (13%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSL 1513
LR YQ G+NWL L ++GIL D+MGLGKTLQ +++A + E+R G P +
Sbjct: 194 LRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAY-LHEYRGING-----PHM 247
Query: 1514 IICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFC---KHNVIITSYDVVR 1570
++ P + +G+W EI ++ V+ +++++G+ +R +R+ K ++ +TS+++
Sbjct: 248 VVAPKSTLGNWMNEIRRF--CPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAI 305
Query: 1571 KDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLF 1630
K+ L + W Y I+DE H IKN S ++ ++ +RL+++GTP+QNN+ +LW+L
Sbjct: 306 KEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALL 365
Query: 1631 DFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDE 1690
+FL+P + F + + S ++ + + + LHK + PFLLRR K +
Sbjct: 366 NFLLPEVFSSAETFDEWF----------QISGENDQQEVV--QQLHKVLRPFLLRRLKSD 413
Query: 1691 VLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAAS 1750
V LP K +S +Q KQ +++ + G R
Sbjct: 414 VEKGLPPKKETILKVGMSQMQ------------KQYYKALLQKDLEVVNGGGER-----K 456
Query: 1751 HVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVALHE 1810
+ L K C+HP L G + P
Sbjct: 457 RLLNIAMQLRKCCNHPYLFQGAE---------------------------PGPPYTTGDH 489
Query: 1811 ILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVE 1870
++ G V + RVLIF+Q LDI+E L + Y R+DG+
Sbjct: 490 LVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLM---YRGYQYCRIDGNTG 546
Query: 1871 PEKRFEIVKAFNSDPTID-VXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAH 1929
++R ++A+N + V +AD ++ + DWNP D QA DRAH
Sbjct: 547 GDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH 606
Query: 1930 RLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINSEN-ASMKTMN 1978
R+GQKK V V R +E KV+ KL++ VI A KT+N
Sbjct: 607 RIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVN 656
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 157/537 (29%), Positives = 263/537 (48%), Gaps = 84/537 (15%)
Query: 1453 TLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPS 1512
TLR YQ EG+N+L + IL D+MGLGKT+Q+ +++ + P P
Sbjct: 624 TLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPG------PF 677
Query: 1513 LIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRD----------NFCKHNVI 1562
L++ P + + +WA E K++ ++ + YVG+ R + + K N +
Sbjct: 678 LVVVPLSTLANWAKEFRKWL--PGMNIIVYVGTRASREVCQQYEFYNEKKVGRPIKFNAL 735
Query: 1563 ITSYDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNN 1622
+T+Y+VV KD L ++ W Y ++DE H +KN+++++ A+ + +++L+++GTP+QN+
Sbjct: 736 LTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNS 795
Query: 1623 IMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPF 1682
+ +LW+L FL PG + +F Y K L S ++E + LH ++ P
Sbjct: 796 VEELWALLHFLDPGKFKNKDEFVENY-KNL-------SSFNESE-----LANLHLELRPH 842
Query: 1683 LLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGS 1742
+LRR +V LP KI + ++SP+Q K Y ++ R +++ V N+ +
Sbjct: 843 ILRRVIKDVEKSLPPKIERILRVEMSPLQ-KQYYKWILERNFHDLNKGVRGNQVS----- 896
Query: 1743 SRNTKAASHVFQALQYLLKLCSHPLLVS------GGKIPDSFSAIFSELFPAGSDVISEL 1796
+ + L K C+HP L GG I D+ S + + +G VI L
Sbjct: 897 ---------LLNIVVELKKCCNHPFLFESADHGYGGDINDN-SKLDKIILSSGKLVI--L 944
Query: 1797 HKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTH 1856
KL LV L E +HRVLIF+Q LDI+ L
Sbjct: 945 DKL-----LVRLRET--------------------KHRVLIFSQMVRMLDILAEYL---S 976
Query: 1857 MKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDV-XXXXXXXXXXXXXXXSADTLVFVEHD 1915
++ + RLDGS + E R + + FN+ + D +ADT+V + D
Sbjct: 977 LRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSD 1036
Query: 1916 WNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINSENA 1972
WNP D QAM RAHR+GQ++VVN++R + ++EE+++ + K+ + + VI NA
Sbjct: 1037 WNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNA 1093
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 197 bits (500), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 156/529 (29%), Positives = 254/529 (48%), Gaps = 82/529 (15%)
Query: 1457 YQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSLIIC 1516
+Q E +NWL + IL D+MGLGKT+ ASA ++S E P L++
Sbjct: 692 HQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGV------ARPCLVLV 745
Query: 1517 PSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRD---------------NFCKHNV 1561
P + + +W E + +++ ++Y GSA R ++RD K NV
Sbjct: 746 PLSTMPNWLSEFSLW--APLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKFNV 803
Query: 1562 IITSYDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQN 1621
++T+Y++V D +L + W ++DEGH +KN++SK+ + QHR++L+GTP+QN
Sbjct: 804 LLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQN 863
Query: 1622 NIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMP 1681
NI ++++L +FL P + F+ + L S A +E L K V P
Sbjct: 864 NIGEMYNLLNFLQPSSFPSLSSFEERFHD--LTS-------------AEKVEELKKLVAP 908
Query: 1682 FLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEG 1741
+LRR K + + ++P K + +L+ +Q + Y RA + + N +G
Sbjct: 909 HMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYY------RAMLTKNYQILRN---IGKG 959
Query: 1742 SSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELH--KL 1799
++ + + + L K+C+HP L+ G + P+S S F LH ++
Sbjct: 960 VAQQS-----MLNIVMQLRKVCNHPYLIPGTE-PESGSLEF-------------LHDMRI 1000
Query: 1800 HHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKN 1859
S KL LH +L+ EG HRVLIF+Q LDI+E D
Sbjct: 1001 KASAKLTLLHSMLK-------VLHKEG------HRVLIFSQMTKLLDILE-DYLNIEFGP 1046
Query: 1860 VTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPM 1919
T+ R+DGSV R + FN D V +ADT++ + D+NP
Sbjct: 1047 KTFERVDGSVAVADRQAAIARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPH 1106
Query: 1920 RDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVIN 1968
D QAM+RAHR+GQ K + V+RL++R ++EE+++ L + KL + +N
Sbjct: 1107 ADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLFVN 1155
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 197 bits (500), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 165/555 (29%), Positives = 255/555 (45%), Gaps = 94/555 (16%)
Query: 1447 CTELKVT--LRRYQQEGINWLAFLKRFKLHGIL-CDDMGLGKTLQASAIVASDIAEHRTP 1503
C+E VT L+ +Q EG++WL ++ +L D MGLGKTLQA + ++ P
Sbjct: 42 CSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLP 101
Query: 1504 IGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFCKH---- 1559
P L++CP ++ W EI ++ + L+YVG R+ +R + H
Sbjct: 102 G------PFLVLCPLSVTDGWVSEINRF--TPNLEVLRYVGDKYCRLDMRKSMYDHVKKS 153
Query: 1560 --------NVIITSYDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKV-TLAVKQLKAQH 1610
+V++T+YD+ D D+L Q+ W Y I+DE +KN S + + ++Q
Sbjct: 154 SKGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPR 213
Query: 1611 RLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGAL 1670
RL+++GTPIQNN+ +LW+L F MP GT QF + + S D
Sbjct: 214 RLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKET-----GDGLSGLDVSNDKE 268
Query: 1671 AMEALHKQVMPFLLRRTKDEVLSD----LPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQE 1726
++L + F+LRRTK ++ LP L +Q K+Y
Sbjct: 269 TYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIY----------- 317
Query: 1727 MSSVVTTNEPAAAE---GSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFS 1783
+S++ P E G S +T + V Q L K CSHP L F I
Sbjct: 318 -TSILRKELPGLLELSSGGSNHTSLQNIVIQ----LRKACSHPYL---------FPGIEP 363
Query: 1784 ELFPAGSDVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKA 1843
E F G H + S KL+ L ++L+ + SG HRVL+F+Q +
Sbjct: 364 EPFEEGE------HLVQASGKLLVLDQLLKR----LHDSG---------HRVLLFSQMTS 404
Query: 1844 FLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNS------DPTID-----VXXX 1892
LDI++ D + ++ +Y RLDGSV E+RF +K F++ D +D V
Sbjct: 405 TLDILQ-DFME--LRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMI 461
Query: 1893 XXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKV 1952
+ADT++F E DWNP D QA+ RAHR+GQ V L+ ++EE +
Sbjct: 462 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVI 521
Query: 1953 MSLQRFKLSVANAVI 1967
+ KL +++ V+
Sbjct: 522 LRRAERKLQLSHNVV 536
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative |
chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 161/553 (29%), Positives = 270/553 (48%), Gaps = 88/553 (15%)
Query: 1431 FLEQLLDNSHIEDYELCTE-LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQA 1489
++E + + ++L E L TL YQ EG+N+L + K + IL D+MGLGKT+Q+
Sbjct: 201 YVENERNREEFKQFDLTPEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQS 260
Query: 1490 SAIVASDIAEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDR 1549
A +AS E +L P L++ P + + +W E + ++ + Y G + R
Sbjct: 261 IAFLASLFEE--------NLSPHLVVAPLSTIRNWEREFATW--APHMNVVMYTGDSEAR 310
Query: 1550 MLLRDN--------FCKHNVIITSYDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKVTL 1601
++ ++ K +V++T+Y++V I L + W I+DEGH +KN KSK+
Sbjct: 311 DVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYS 370
Query: 1602 AVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCS 1661
++ Q ++H ++L+GTP+QNN+ +L++L FL G+ +FQ K SR
Sbjct: 371 SLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQDI-NKEEQISR----- 424
Query: 1662 AKDAEAGALAMEALHKQVMPFLLRRTKDEVLSD-LPEKIIQDRYCDLSPVQLKLYEQFSG 1720
LH+ + P LLRR K +VL D +P K D+S Q ++Y+
Sbjct: 425 -------------LHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYK---- 467
Query: 1721 SRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSA 1780
+V+T N + K + + L L ++CSHP L +PD
Sbjct: 468 --------AVITNNYQVLTK------KRDAKISNVLMKLRQVCSHPYL-----LPD---- 504
Query: 1781 IFSELFPAGSDVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQ 1840
F F ++ ++L L S KL ++L++ + + G HRVLI+ Q
Sbjct: 505 -FEPRFEDANEAFTKL--LEASGKL----QLLDKMMVKLKEQG---------HRVLIYTQ 548
Query: 1841 HKAFLDIIERDLFQTHMKNVTYLRLDGSVE-PEKRFEIVKAFNSDPTIDV-XXXXXXXXX 1898
+ L ++E D F KN Y R+DG + PE++ I + FN++ +
Sbjct: 549 FQHTLYLLE-DYFT--FKNWNYERIDGKISGPERQVRIDR-FNAENSNRFCFLLSTRAGG 604
Query: 1899 XXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRF 1958
+ADT++ + DWNP D QAM R HRLGQ V ++RLI +GT+EE++M + +
Sbjct: 605 IGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKN 664
Query: 1959 KLSVANAVINSEN 1971
K+ + + V+ ++
Sbjct: 665 KMLLEHLVVGKQH 677
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative |
chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 161/553 (29%), Positives = 270/553 (48%), Gaps = 88/553 (15%)
Query: 1431 FLEQLLDNSHIEDYELCTE-LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQA 1489
++E + + ++L E L TL YQ EG+N+L + K + IL D+MGLGKT+Q+
Sbjct: 160 YVENERNREEFKQFDLTPEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQS 219
Query: 1490 SAIVASDIAEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDR 1549
A +AS E +L P L++ P + + +W E + ++ + Y G + R
Sbjct: 220 IAFLASLFEE--------NLSPHLVVAPLSTIRNWEREFATW--APHMNVVMYTGDSEAR 269
Query: 1550 MLLRDN--------FCKHNVIITSYDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKVTL 1601
++ ++ K +V++T+Y++V I L + W I+DEGH +KN KSK+
Sbjct: 270 DVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYS 329
Query: 1602 AVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCS 1661
++ Q ++H ++L+GTP+QNN+ +L++L FL G+ +FQ K SR
Sbjct: 330 SLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQDI-NKEEQISR----- 383
Query: 1662 AKDAEAGALAMEALHKQVMPFLLRRTKDEVLSD-LPEKIIQDRYCDLSPVQLKLYEQFSG 1720
LH+ + P LLRR K +VL D +P K D+S Q ++Y+
Sbjct: 384 -------------LHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYK---- 426
Query: 1721 SRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSA 1780
+V+T N + K + + L L ++CSHP L +PD
Sbjct: 427 --------AVITNNYQVLTK------KRDAKISNVLMKLRQVCSHPYL-----LPD---- 463
Query: 1781 IFSELFPAGSDVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQ 1840
F F ++ ++L L S KL ++L++ + + G HRVLI+ Q
Sbjct: 464 -FEPRFEDANEAFTKL--LEASGKL----QLLDKMMVKLKEQG---------HRVLIYTQ 507
Query: 1841 HKAFLDIIERDLFQTHMKNVTYLRLDGSVE-PEKRFEIVKAFNSDPTIDV-XXXXXXXXX 1898
+ L ++E D F KN Y R+DG + PE++ I + FN++ +
Sbjct: 508 FQHTLYLLE-DYFT--FKNWNYERIDGKISGPERQVRIDR-FNAENSNRFCFLLSTRAGG 563
Query: 1899 XXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRF 1958
+ADT++ + DWNP D QAM R HRLGQ V ++RLI +GT+EE++M + +
Sbjct: 564 IGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKN 623
Query: 1959 KLSVANAVINSEN 1971
K+ + + V+ ++
Sbjct: 624 KMLLEHLVVGKQH 636
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 187 bits (475), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 151/562 (26%), Positives = 255/562 (45%), Gaps = 72/562 (12%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVAS----DIAEHRTPIGNDDL 1509
L +Q+EG+ ++ L + GIL DDMGLGKT+Q A +A+ D + + D
Sbjct: 139 LLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDK 198
Query: 1510 LPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFCKHNVIITSYDVV 1569
P LIICPS+++ +W E ++ +S Y GS D +L + V++TS+D
Sbjct: 199 GPVLIICPSSIIHNWESEFSRWASFFKVSV--YHGSNRDMILEKLKARGVEVLVTSFDTF 256
Query: 1570 RKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSL 1629
R L + W I DE H +KN KSK+ A ++K + R+ L+GT +QN I +L++L
Sbjct: 257 RIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFNL 316
Query: 1630 FDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKD 1689
F+++ PG LGT F+ Y +PL + + + + L + ++LRRTK+
Sbjct: 317 FEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRRTKE 376
Query: 1690 EVLSDL----PEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRN 1745
E + L + ++ +C +S +Q ++Y++ E+ +V + P A +
Sbjct: 377 ETIGHLMMGKEDNVV---FCQMSQLQRRVYQRMI---QLPEIQCLVNKDNPCACGSPLKQ 430
Query: 1746 TKAASH--------------------------VFQALQYLLKLCSHPLLVSGG------- 1772
++ V L L ++ +H L+
Sbjct: 431 SECCRRIVPDGTIWSYLHRDNHDGCDSCPFCLVLPCLMKLQQISNHLELIKPNPKDEPEK 490
Query: 1773 --KIPDSFSAIFSELFP-----AGSDVISELHKLHHSPKLVALHEILEECGIGVDASGSE 1825
K + S +F + S +L + H K+ AL +++
Sbjct: 491 QKKDAEFVSTVFGTDIDLLGGISASKSFMDLSDVKHCGKMRALEKLM------------A 538
Query: 1826 GTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDP 1885
+S G ++L+F+ LDI+E+ L + K ++ RLDGS R +V FN+ P
Sbjct: 539 SWISKGD-KILLFSYSVRMLDILEKFLIR---KGYSFARLDGSTPTNLRQSLVDDFNASP 594
Query: 1886 TIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMR 1945
+ V SA+ +V + +WNP D QA DR+ R GQK+ V V RL+
Sbjct: 595 SKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSA 654
Query: 1946 GTLEEKVMSLQRFKLSVANAVI 1967
G+LEE V + Q +K ++N +
Sbjct: 655 GSLEELVYTRQVYKQQLSNIAV 676
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 184 bits (468), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 160/572 (27%), Positives = 266/572 (46%), Gaps = 90/572 (15%)
Query: 1448 TELKVTLRRYQQEGINWLAFLKRFKLHG-ILCDDMGLGKTLQASAIVA--SDIAEHRTPI 1504
++ + L+ YQ G+N+L L + + G IL D+MGLGKT+QA + S +
Sbjct: 207 SDFQPILKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRL------- 259
Query: 1505 GNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFCKH----- 1559
N+D P L++CP++++ +W E+ K+ + LQY G+A N
Sbjct: 260 -NNDPGPHLVVCPASVLENWERELRKW--CPSFTVLQYHGAARAAYSRELNSLSKAGKPP 316
Query: 1560 --NVIITSYDVVRK-------DIDYLGQLFWNYCILDEGHIIKNAKS---KVTLAVKQLK 1607
NV++ Y + + D L + W+ ++DE H +K+ S K ++V +
Sbjct: 317 PFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVAR-N 375
Query: 1608 AQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEA 1667
A RL+L+GTP+QN++ +LWSL +F++P TE K LL + D + +
Sbjct: 376 ANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTE----NVDLKKLLNAEDTELITR---- 427
Query: 1668 GALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLY-EQFSGSRAKQE 1726
M+++ + PF+LRR K +V+ L KI + Y + Q Y E RA +
Sbjct: 428 ----MKSI---LGPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQ 480
Query: 1727 MSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELF 1786
V +++ + + + S+ F + K+ +HPLL+ + I +L
Sbjct: 481 ARLVKLSSKSLNSLAKALPKRQISNYFTQFR---KIANHPLLIRRIYSDEDVIRIARKLH 537
Query: 1787 PAGS--------DVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQ------ 1832
P G+ VI E+ + +H++L + G+ + ++GT+S
Sbjct: 538 PIGAFGFECSLDRVIEEVKGFND----FRIHQLLFQYGV----NDTKGTLSDKHVMLSAK 589
Query: 1833 ---------------HRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEI 1877
HRVLIF+Q + LDI+E L + VTY RLDGS + R I
Sbjct: 590 CRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTL---DVIGVTYRRLDGSTQVTDRQTI 646
Query: 1878 VKAFNSDPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVV 1937
V FN+D +I ADT++ + D+NP D QA DR HR+GQ K V
Sbjct: 647 VDTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPV 706
Query: 1938 NVHRLIMRGTLEEKVMSLQRFKLSVANAVINS 1969
+ RL+ + T++E + + + KL + AV+ S
Sbjct: 707 TIFRLVTKSTVDENIYEIAKRKLVLDAAVLES 738
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 177 bits (450), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 156/535 (29%), Positives = 245/535 (45%), Gaps = 67/535 (12%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHG-------ILCDDMGLGKTLQASAIVASDIAE--HRTPI 1504
LR +Q+EG+ ++ F LHG IL DDMGLGKTLQ+ ++ + + + TP+
Sbjct: 180 LRPHQREGVQFM-FDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPM 238
Query: 1505 GNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLR-DNFCKH---- 1559
+ ++I+ P++LV +W EI+K++ I + S D +L D+F +
Sbjct: 239 ----VKKAIIVTPTSLVSNWEAEIKKWVG-DRIQLIALCESTRDDVLSGIDSFTRPRSAL 293
Query: 1560 NVIITSYDVVRKDIDYLGQL-FWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTP 1618
V+I SY+ R Q + I DE H +KN ++ A+ L + R++LSGTP
Sbjct: 294 QVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTP 353
Query: 1619 IQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQ 1678
+QN++ + +++ +F PG LG F+ Y P++ R+P + ++ A L +
Sbjct: 354 MQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSK 413
Query: 1679 VMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAA 1738
V F+LRRT + + LP KII+ C ++ +Q LY F S+ N A
Sbjct: 414 VNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSK-----------NLKRA 462
Query: 1739 AEGSSRNTKAASHVFQALQYLLKLCSHPLLV-----SGGKIPDSFSAIFSELFPA----- 1788
+++ TK +++ L KLC+HP L+ SG F E FPA
Sbjct: 463 LADNAKQTKVLAYI----TALKKLCNHPKLIYDTIKSGNPGTVGFENCL-EFFPAEMFSG 517
Query: 1789 --GSDVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLD 1846
G+ + + S K+ L +L D R+++ + + LD
Sbjct: 518 RSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTD------------DRIVLVSNYTQTLD 565
Query: 1847 IIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTID--VXXXXXXXXXXXXXXX 1904
+ + + +LRLDGS KR ++V N DPT D
Sbjct: 566 LFAQ---LCRERRYPFLRLDGSTTISKRQKLVNRLN-DPTKDEFAFLLSSKAGGCGLNLI 621
Query: 1905 SADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFK 1959
A+ LV + DWNP D QA R R GQKK V V+R + GT+EEKV Q K
Sbjct: 622 GANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSK 676
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 177 bits (449), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 241/499 (48%), Gaps = 62/499 (12%)
Query: 1453 TLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPS 1512
TLR YQ G+ W+ L KL+GIL D+MGLGKT+Q A++A + E + G P
Sbjct: 980 TLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAY-LMEFKGNYG-----PH 1033
Query: 1513 LIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLL--RDNFCKHNVIITSYDVVR 1570
LII P+ ++ +W E+ ++ +S + YVG+ R L + F K NV++T+Y+ +
Sbjct: 1034 LIIVPNAVLVNWKSELHTWL--PSVSCIYYVGTKDQRSKLFSQVKFEKFNVLVTTYEFIM 1091
Query: 1571 KDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLF 1630
D L ++ W Y I+DE +K+ +S + + + + Q RL+L+GTP+QN++ +LWSL
Sbjct: 1092 YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLL 1151
Query: 1631 DFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKD----AEAGALAMEALHKQVMPFLLRR 1686
+ L+P + F + +P P + +D E + + LH+ + PF+LRR
Sbjct: 1152 NLLLPDVFDNRKAFHDWFAQP-FQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRR 1210
Query: 1687 TKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNT 1746
++V LP K+ C +S +Q +Y+ + + V +E A+ +N
Sbjct: 1211 RVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLR----VDPDDEKLRAQ---KNP 1263
Query: 1747 KAASHVFQALQ----YLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHS 1802
+ +++ L L K C+HPLL P + FS+ F ++ KL
Sbjct: 1264 IYQAKIYRTLNNRCMELRKACNHPLL----NYP--YFNDFSKDF-----LVRSCGKLW-- 1310
Query: 1803 PKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTY 1862
IL+ I + +G HRVL+F+ LDI+E L + + Y
Sbjct: 1311 --------ILDRILIKLQRTG---------HRVLLFSTMTKLLDILEEYL---QWRRLVY 1350
Query: 1863 LRLDGSVEPEKRFEIVKAFNSDPTID--VXXXXXXXXXXXXXXXSADTLVFVEHDWNPMR 1920
R+DG+ E R + FN DP D + +ADT+V + D NP
Sbjct: 1351 RRIDGTTSLEDRESAIVDFN-DPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKN 1409
Query: 1921 DHQAMDRAHRLGQKKVVNV 1939
+ QA+ RAHR+GQ + V V
Sbjct: 1410 EEQAVARAHRIGQTREVKV 1428
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 176 bits (446), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 240/500 (48%), Gaps = 63/500 (12%)
Query: 1453 TLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPS 1512
TLR YQ G+ W+ L KL+GIL D+MGLGKT+Q A++A + E + G P
Sbjct: 980 TLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAY-LMEFKGNYG-----PH 1033
Query: 1513 LIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDR-MLLRDNFC--KHNVIITSYDVV 1569
LII P+ ++ +W E+ ++ +S + YVG+ R L C K NV++T+Y+ +
Sbjct: 1034 LIIVPNAVLVNWKSELHTWL--PSVSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFI 1091
Query: 1570 RKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSL 1629
D L ++ W Y I+DE +K+ +S + + + + Q RL+L+GTP+QN++ +LWSL
Sbjct: 1092 MYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSL 1151
Query: 1630 FDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKD----AEAGALAMEALHKQVMPFLLR 1685
+ L+P + F + +P P + +D E + + LH+ + PF+LR
Sbjct: 1152 LNLLLPDVFDNRKAFHDWFAQP-FQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLR 1210
Query: 1686 RTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRN 1745
R ++V LP K+ C +S +Q +Y+ + + V +E A+ +N
Sbjct: 1211 RRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLR----VDPDDEKLRAQ---KN 1263
Query: 1746 TKAASHVFQALQ----YLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHH 1801
+ +++ L L K C+HPLL P + FS+ F ++ KL
Sbjct: 1264 PIYQAKIYRTLNNRCMELRKACNHPLL----NYP--YFNDFSKDF-----LVRSCGKLW- 1311
Query: 1802 SPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVT 1861
IL+ I + +G HRVL+F+ LDI+E L + +
Sbjct: 1312 ---------ILDRILIKLQRTG---------HRVLLFSTMTKLLDILEEYL---QWRRLV 1350
Query: 1862 YLRLDGSVEPEKRFEIVKAFNSDPTID--VXXXXXXXXXXXXXXXSADTLVFVEHDWNPM 1919
Y R+DG+ E R + FN DP D + +ADT+V + D NP
Sbjct: 1351 YRRIDGTTSLEDRESAIVDFN-DPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPK 1409
Query: 1920 RDHQAMDRAHRLGQKKVVNV 1939
+ QA+ RAHR+GQ + V V
Sbjct: 1410 NEEQAVARAHRIGQTREVKV 1429
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 173 bits (439), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 170/332 (51%), Gaps = 32/332 (9%)
Query: 1450 LKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDL 1509
LK +LR YQ G++WL + KL+GIL D+MGLGKT+ A++A +A + G
Sbjct: 532 LKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAH-LACDKGIWG---- 586
Query: 1510 LPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFCKHN---VIITSY 1566
P LI+ P++++ +W E K+ I L Y GSA +R L R + K N V IT+Y
Sbjct: 587 -PHLIVVPTSVMLNWETEFLKWCPAFKI--LTYFGSAKERKLKRQGWMKLNSFHVCITTY 643
Query: 1567 DVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDL 1626
+V +D + W Y ILDE H+IKN KS+ + ++ R++L+GTP+QN++M+L
Sbjct: 644 RLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMEL 703
Query: 1627 WSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRR 1686
WSL FLMP + ++F+ + P+ + + + ++ LH + PFLLRR
Sbjct: 704 WSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQ-----EKINKEVIDRLHNVLRPFLLRR 758
Query: 1687 TKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNT 1746
K +V LP K +C LS Q LYE F + + E A S
Sbjct: 759 LKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDF------------IASTETQATLTSGSFF 806
Query: 1747 KAASHVFQALQYLLKLCSHPLLVSGGKIPDSF 1778
S + Q L K+C+HP L G I SF
Sbjct: 807 GMISIIMQ----LRKVCNHPDLFEGRPIVSSF 834
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 1828 VSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTI 1887
+ G HR LIF Q LD++E + ++ TY+RLDGS PE+R +++ FN++P I
Sbjct: 1087 LKFGGHRALIFTQMTKMLDVLEAFI---NLYGYTYMRLDGSTPPEERQTLMQRFNTNPKI 1143
Query: 1888 DVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGT 1947
+ ADT++F + DWNP D QA DR HR+GQ + V+++RLI T
Sbjct: 1144 FLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISEST 1203
Query: 1948 LEEKVMSLQRFKLSVANAVINS 1969
+EE ++ K + N VI +
Sbjct: 1204 IEENILKKANQKRVLDNLVIQN 1225
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 152/535 (28%), Positives = 244/535 (45%), Gaps = 69/535 (12%)
Query: 1454 LRRYQQEGINWLAFLKRFKLHG-------ILCDDMGLGKTLQASAIVASDIAE--HRTPI 1504
LR +Q+EG+ ++ F LHG IL DDMGLGKTLQ+ ++ + + + TP+
Sbjct: 180 LRPHQREGVQFM-FDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPM 238
Query: 1505 GNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLR-DNFCKH---- 1559
+ ++I+ P++LV +W EI+K++ I + S D +L D+F +
Sbjct: 239 ----VKKAIIVTPTSLVSNWEAEIKKWVG-DRIQLIALCESTRDDVLSGIDSFTRPRSAL 293
Query: 1560 NVIITSYDVVRKDIDYLGQL-FWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTP 1618
V+I SY+ R Q + I DE H +KN ++ A+ L + R++LSGTP
Sbjct: 294 QVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTP 353
Query: 1619 IQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQ 1678
+QN++ + +++ +F PG LG F+ Y P++ R+P + ++ A L +
Sbjct: 354 MQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSK 413
Query: 1679 VMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAA 1738
V F+LRRT + + LP KII+ C ++ +Q ++G Q ++
Sbjct: 414 VNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQTT----YNGCLCMQLKRALA------- 462
Query: 1739 AEGSSRNTKAASHVFQALQYLLKLCSHPLLV-----SGGKIPDSFSAIFSELFPA----- 1788
+++ TK +++ L KLC+HP L+ SG F E FPA
Sbjct: 463 --DNAKQTKVLAYI----TALKKLCNHPKLIYDTIKSGNPGTVGFENCL-EFFPAEMFSG 515
Query: 1789 --GSDVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLD 1846
G+ + + S K+ L +L D R+++ + + LD
Sbjct: 516 RSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTD------------DRIVLVSNYTQTLD 563
Query: 1847 IIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTID--VXXXXXXXXXXXXXXX 1904
+ + + +LRLDGS KR ++V N DPT D
Sbjct: 564 LFAQ---LCRERRYPFLRLDGSTTISKRQKLVNRLN-DPTKDEFAFLLSSKAGGCGLNLI 619
Query: 1905 SADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFK 1959
A+ LV + DWNP D QA R R GQKK V V+R + GT+EEKV Q K
Sbjct: 620 GANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSK 674
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 194/420 (46%), Gaps = 57/420 (13%)
Query: 1428 DLHFLEQLLDNSHIEDYELCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTL 1487
DLH + S ++ EL K TL+ YQ +G+ WL L+GIL D+MGLGKT+
Sbjct: 563 DLHNPSTMPVTSTVQTPEL---FKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTI 619
Query: 1488 QASAIVASDIAEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAP 1547
QA A +A +AE + G P L++ P++++ +WA EI ++ + +L Y G
Sbjct: 620 QAMAFLAH-LAEEKNIWG-----PFLVVAPASVLNNWADEISRF--CPDLKTLPYWGGLQ 671
Query: 1548 DRMLLRDNF---------CKHNVIITSYDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSK 1598
+R +LR N +++ITSY ++ D Y ++ W Y +LDE IK++ S
Sbjct: 672 ERTILRKNINPKRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSI 731
Query: 1599 VTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDP 1658
+ ++RL+L+GTPIQNN+ +LW+L F+MP QF + K +
Sbjct: 732 RWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGI------ 785
Query: 1659 KCSAKDAEAGALAME----ALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKL 1714
AE G E LH + PF+LRR K +V+S+L K +C LS Q
Sbjct: 786 ---ENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAF 842
Query: 1715 YEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLL------ 1768
Y+ + K ++ + +N G + K + + +Q L K+C+HP L
Sbjct: 843 YQAI---KNKISLAELFDSN-----RGQFTDKKVLNLMNIVIQ-LRKVCNHPELFERNEG 893
Query: 1769 --------VSGGKIPDSFSAIFSELFPAGSD-VISELHKLHHSPKLVALHEILEECGIGV 1819
S +P F + + G + +I ++ KL H L G G+
Sbjct: 894 SSYLYFGVTSNSLLPHPFGELEDVHYSGGQNPIIYKIPKLLHQEVLQNSETFCSSVGRGI 953
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 1769 VSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVALHEILEEC--------GIGVD 1820
+G + P+SF P ++ SEL + P L H I C +
Sbjct: 1152 ANGPRKPNSFP------HPLIQEIDSELPVVQ--PALQLTHRIFGSCPPMQSFDPAKLLT 1203
Query: 1821 ASGSEGTVSI-------GQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEK 1873
SG T+ I G HRVL+FAQ L+I+E + + + YLRLDGS
Sbjct: 1204 DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYM---NYRKYKYLRLDGSSTIMD 1260
Query: 1874 RFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQ 1933
R ++V+ F I V +ADT++F E DWNP D QAMDRAHRLGQ
Sbjct: 1261 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1320
Query: 1934 KKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVI 1967
K V V+RLI + T+EEK++ K +V V+
Sbjct: 1321 TKDVTVYRLICKETVEEKILHRASQKNTVQQLVM 1354
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 236/545 (43%), Gaps = 80/545 (14%)
Query: 1473 LHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYI 1532
L IL MGLGKT Q A + + A +G L +LI+ P ++ +W E EK++
Sbjct: 748 LGCILAHTMGLGKTFQVIAFLYT--AMRCVDLG---LKTALIVTPVNVLHNWRSEFEKWM 802
Query: 1533 DVSVISSLQYVGSAPDRMLLRDNFCKHNVIITSYDVVRKDIDYLGQLFW------NYCIL 1586
V P R+ + + ++ KD++ + + +
Sbjct: 803 PSEV---------KPLRIFMLGDVSRYKFFYERNFWGVKDLNAARGICNALRDGPDILVC 853
Query: 1587 DEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQG 1646
DE HIIKN K+ T A+KQ+K Q R+ L+G+P+QNN+M+ + + DF+ GFLG+ +F+
Sbjct: 854 DEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRN 913
Query: 1647 TYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCD 1706
+ P+ + +A+D + L++Q+ F+ R + V DLP K +
Sbjct: 914 RFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVK 973
Query: 1707 LSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHP 1766
LSP+Q LY++F E + + + F A Q L ++ +HP
Sbjct: 974 LSPLQRILYQRFL---------------ELYGFSDGRTDERMRKNFFAAYQVLAQILNHP 1018
Query: 1767 LL-------VSGGK------IPD--------SFSAIFSELFPAGSDVISELHKLHHSPKL 1805
+ G+ IPD ++ + E +D+ ++
Sbjct: 1019 GIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWW 1078
Query: 1806 VALHEILEECGIGV-DASGS--------EGTVSIGQHRVLIFAQHKAFLDIIERDLFQT- 1855
V ++L++ V D SG + +G + L+F+Q LD+IE L +
Sbjct: 1079 V---DLLQKNNYKVSDFSGKMILLLDILSMSADVGD-KALVFSQSIPTLDLIELYLSRVP 1134
Query: 1856 --------HMKNVTYLRLDGSVEPEKRFEIVKAFNS--DPTIDVXXXXXXXXXXXXXXXS 1905
K + R+DG E +R ++V FN + + +
Sbjct: 1135 RHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYA 1194
Query: 1906 ADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANA 1965
A+ ++ V+ WNP D QA+ RA R GQKK V +RL+ RGT+EEK+ Q K +A
Sbjct: 1195 ANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAAR 1254
Query: 1966 VINSE 1970
V++ +
Sbjct: 1255 VVDRQ 1259
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 196/453 (43%), Gaps = 90/453 (19%)
Query: 1428 DLHFLEQLLDNSHIEDYELCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTL 1487
DLH + S ++ EL K TL+ YQ +G+ WL L+GIL D+MGLGKT+
Sbjct: 563 DLHNPSTMPVTSTVQTPEL---FKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTI 619
Query: 1488 QASAIVASDIAEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAP 1547
QA A +A +AE + G P L++ P++++ +WA EI ++ + +L Y G
Sbjct: 620 QAMAFLAH-LAEEKNIWG-----PFLVVAPASVLNNWADEISRF--CPDLKTLPYWGGLQ 671
Query: 1548 DRMLLRDNF-------------------------CKH-----------------NVIITS 1565
+R +LR N CK +++ITS
Sbjct: 672 ERTILRKNINPKRVMFFSTWIISFDPWAVRQICICKRACNVVRFQTLSDMDAGFHILITS 731
Query: 1566 YDVVRKDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMD 1625
Y ++ D Y ++ W Y +LDE IK++ S + ++RL+L+GTPIQNN+ +
Sbjct: 732 YQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAE 791
Query: 1626 LWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAME----ALHKQVMP 1681
LW+L F+MP QF + K + AE G E LH + P
Sbjct: 792 LWALLHFIMPMLFDNHDQFNEWFSKGI---------ENHAEHGGTLNEHQLNRLHAILKP 842
Query: 1682 FLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEG 1741
F+LRR K +V+S+L K +C LS Q Y+ + K ++ + +N G
Sbjct: 843 FMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAI---KNKISLAELFDSN-----RG 894
Query: 1742 SSRNTKAASHVFQALQYLLKLCSHPLL--------------VSGGKIPDSFSAIFSELFP 1787
+ K + + +Q L K+C+HP L S +P F + +
Sbjct: 895 QFTDKKVLNLMNIVIQ-LRKVCNHPELFERNEGSSYLYFGVTSNSLLPHPFGELEDVHYS 953
Query: 1788 AGSD-VISELHKLHHSPKLVALHEILEECGIGV 1819
G + +I ++ KL H L G G+
Sbjct: 954 GGQNPIIYKIPKLLHQEVLQNSETFCSSVGRGI 986
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 1769 VSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVALHEILEEC--------GIGVD 1820
+G + P+SF P ++ SEL + P L H I C +
Sbjct: 1185 ANGPRKPNSFP------HPLIQEIDSELPVVQ--PALQLTHRIFGSCPPMQSFDPAKLLT 1236
Query: 1821 ASGSEGTVSI-------GQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEK 1873
SG T+ I G HRVL+FAQ L+I+E + + + YLRLDGS
Sbjct: 1237 DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYM---NYRKYKYLRLDGSSTIMD 1293
Query: 1874 RFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQ 1933
R ++V+ F I V +ADT++F E DWNP D QAMDRAHRLGQ
Sbjct: 1294 RRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQ 1353
Query: 1934 KKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVI 1967
K V V+RLI + T+EEK++ K +V V+
Sbjct: 1354 TKDVTVYRLICKETVEEKILHRASQKNTVQQLVM 1387
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 238/554 (42%), Gaps = 83/554 (14%)
Query: 1476 ILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDVS 1535
IL MGLGKT Q A + + A +G L +LI+ P ++ +W E EK++
Sbjct: 751 ILAHTMGLGKTFQVIAFLYT--AMRCVDLG---LKTALIVTPVNVLHNWRSEFEKWMPSE 805
Query: 1536 V----ISSLQYVGSAPDRMLLRDNFCKHNVIITSYDVVR--------KDIDYLGQLFW-- 1581
V I L V LL K V + Y R KD++ +
Sbjct: 806 VKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNAL 865
Query: 1582 ----NYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGF 1637
+ + DE HIIKN K+ T A+KQ+K Q R+ L+G+P+QNN+M+ + + DF+ GF
Sbjct: 866 RDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 925
Query: 1638 LGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPE 1697
LG+ +F+ + P+ + +A+D + L++Q+ F+ R + V DLP
Sbjct: 926 LGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 985
Query: 1698 KIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQ 1757
K + LSP+Q LY++F E + + + F A Q
Sbjct: 986 KTVFVISVKLSPLQRILYQRFL---------------ELYGFSDGRTDERMRKNFFAAYQ 1030
Query: 1758 YLLKLCSHPLL-------VSGGK------IPD--------SFSAIFSELFPAGSDVISEL 1796
L ++ +HP + G+ IPD ++ + E +D+ ++
Sbjct: 1031 VLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKV 1090
Query: 1797 HKLHHSPKLVALHEILEECGIGV-DASGS--------EGTVSIGQHRVLIFAQHKAFLDI 1847
V ++L++ V D SG + +G + L+F+Q LD+
Sbjct: 1091 DGYLQKDWWV---DLLQKNNYKVSDFSGKMILLLDILSMSADVGD-KALVFSQSIPTLDL 1146
Query: 1848 IERDLFQT---------HMKNVTYLRLDGSVEPEKRFEIVKAFNS--DPTIDVXXXXXXX 1896
IE L + K + R+DG E +R ++V FN + +
Sbjct: 1147 IELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRA 1206
Query: 1897 XXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQ 1956
+A+ ++ V+ WNP D QA+ RA R GQKK V +RL+ RGT+EEK+ Q
Sbjct: 1207 GSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQ 1266
Query: 1957 RFKLSVANAVINSE 1970
K +A V++ +
Sbjct: 1267 VTKEGLAARVVDRQ 1280
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 238/554 (42%), Gaps = 83/554 (14%)
Query: 1476 ILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDVS 1535
IL MGLGKT Q A + + A +G L +LI+ P ++ +W E EK++
Sbjct: 751 ILAHTMGLGKTFQVIAFLYT--AMRCVDLG---LKTALIVTPVNVLHNWRSEFEKWMPSE 805
Query: 1536 V----ISSLQYVGSAPDRMLLRDNFCKHNVIITSYDVVR--------KDIDYLGQLFW-- 1581
V I L V LL K V + Y R KD++ +
Sbjct: 806 VKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNAL 865
Query: 1582 ----NYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGF 1637
+ + DE HIIKN K+ T A+KQ+K Q R+ L+G+P+QNN+M+ + + DF+ GF
Sbjct: 866 RDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 925
Query: 1638 LGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPE 1697
LG+ +F+ + P+ + +A+D + L++Q+ F+ R + V DLP
Sbjct: 926 LGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 985
Query: 1698 KIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQ 1757
K + LSP+Q LY++F E + + + F A Q
Sbjct: 986 KTVFVISVKLSPLQRILYQRFL---------------ELYGFSDGRTDERMRKNFFAAYQ 1030
Query: 1758 YLLKLCSHPLL-------VSGGK------IPD--------SFSAIFSELFPAGSDVISEL 1796
L ++ +HP + G+ IPD ++ + E +D+ ++
Sbjct: 1031 VLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKV 1090
Query: 1797 HKLHHSPKLVALHEILEECGIGV-DASGS--------EGTVSIGQHRVLIFAQHKAFLDI 1847
V ++L++ V D SG + +G + L+F+Q LD+
Sbjct: 1091 DGYLQKDWWV---DLLQKNNYKVSDFSGKMILLLDILSMSADVGD-KALVFSQSIPTLDL 1146
Query: 1848 IERDLFQT---------HMKNVTYLRLDGSVEPEKRFEIVKAFNS--DPTIDVXXXXXXX 1896
IE L + K + R+DG E +R ++V FN + +
Sbjct: 1147 IELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRA 1206
Query: 1897 XXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQ 1956
+A+ ++ V+ WNP D QA+ RA R GQKK V +RL+ RGT+EEK+ Q
Sbjct: 1207 GSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQ 1266
Query: 1957 RFKLSVANAVINSE 1970
K +A V++ +
Sbjct: 1267 VTKEGLAARVVDRQ 1280
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 238/554 (42%), Gaps = 83/554 (14%)
Query: 1476 ILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDVS 1535
IL MGLGKT Q A + + A +G L +LI+ P ++ +W E EK++
Sbjct: 751 ILAHTMGLGKTFQVIAFLYT--AMRCVDLG---LKTALIVTPVNVLHNWRSEFEKWMPSE 805
Query: 1536 V----ISSLQYVGSAPDRMLLRDNFCKHNVIITSYDVVR--------KDIDYLGQLFW-- 1581
V I L V LL K V + Y R KD++ +
Sbjct: 806 VKPLRIFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNAL 865
Query: 1582 ----NYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGF 1637
+ + DE HIIKN K+ T A+KQ+K Q R+ L+G+P+QNN+M+ + + DF+ GF
Sbjct: 866 RDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 925
Query: 1638 LGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPE 1697
LG+ +F+ + P+ + +A+D + L++Q+ F+ R + V DLP
Sbjct: 926 LGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 985
Query: 1698 KIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQ 1757
K + LSP+Q LY++F E + + + F A Q
Sbjct: 986 KTVFVISVKLSPLQRILYQRFL---------------ELYGFSDGRTDERMRKNFFAAYQ 1030
Query: 1758 YLLKLCSHPLL-------VSGGK------IPD--------SFSAIFSELFPAGSDVISEL 1796
L ++ +HP + G+ IPD ++ + E +D+ ++
Sbjct: 1031 VLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKV 1090
Query: 1797 HKLHHSPKLVALHEILEECGIGV-DASGS--------EGTVSIGQHRVLIFAQHKAFLDI 1847
V ++L++ V D SG + +G + L+F+Q LD+
Sbjct: 1091 DGYLQKDWWV---DLLQKNNYKVSDFSGKMILLLDILSMSADVGD-KALVFSQSIPTLDL 1146
Query: 1848 IERDLFQT---------HMKNVTYLRLDGSVEPEKRFEIVKAFNS--DPTIDVXXXXXXX 1896
IE L + K + R+DG E +R ++V FN + +
Sbjct: 1147 IELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRA 1206
Query: 1897 XXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQ 1956
+A+ ++ V+ WNP D QA+ RA R GQKK V +RL+ RGT+EEK+ Q
Sbjct: 1207 GSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQ 1266
Query: 1957 RFKLSVANAVINSE 1970
K +A V++ +
Sbjct: 1267 VTKEGLAARVVDRQ 1280
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 156/616 (25%), Positives = 259/616 (42%), Gaps = 121/616 (19%)
Query: 1427 EDLHFLEQLLDNSHI-EDYELCTELKVTLRRYQQEGINWLAFLKRFKLHG-ILCDDMGLG 1484
ED F EQ N+ I E E +L + L +YQ+E + W + + G IL D+MG+G
Sbjct: 109 EDDDFDEQ---NAVIAEAAEQPLDLIIPLLKYQKEFLAWATIQELSAVRGGILADEMGMG 165
Query: 1485 KTLQASAIVAS----DIAEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSL 1540
KT+QA ++V + D A+ R +G+ +L++ P + W EI + L
Sbjct: 166 KTIQAISLVLARREVDRAKSREAVGH-----TLVLVPPVALSQWLDEISRLTSPGSTRVL 220
Query: 1541 QYVGSAPDRMLLRDNFCKHNVIITSYDVV----RKD------IDYLGQLFWNYCILDEGH 1590
QY G D+ + + ++ ++T+ +V RKD + L + WN I+DE H
Sbjct: 221 QYHGPKRDKNVQK--LMNYDFVLTTSPIVENEYRKDEGVDETMSPLHSIKWNRIIVDEAH 278
Query: 1591 IIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGK 1650
IKN S+ AV L+A +R LSGTP+QN++ +L+SL + F F TY
Sbjct: 279 DIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSLVSYSFLNF------FYSTYAS 332
Query: 1651 PLLASRDPKCS-AKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSP 1709
A R + A++ L + +P + ++ + + R LS
Sbjct: 333 --FAFRHTHITFARNVTVKFLIGGNILPLSIPVRIENVPAVLIMQINTSLGGKRRDALSV 390
Query: 1710 VQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLLV 1769
V+ YE TT + G+ N A H+F L L + HP LV
Sbjct: 391 VEADFYESLYKVSK--------TTFDGYIQAGTLMNNYA--HIFGLLIRLRQAVDHPYLV 440
Query: 1770 SGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVS 1829
S+S+ P+G++ L+ ++ +ECG G D S + V+
Sbjct: 441 -------SYSS------PSGANA-----------NLLDANKNEKECGFGHDPS-KDYFVT 475
Query: 1830 IGQH-----------------------------------------------RVLIFAQHK 1842
+H + ++F+Q
Sbjct: 476 SSEHQASKTKLKGFRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQFT 535
Query: 1843 AFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXX 1902
+FLD+I L ++ V+ ++L GS+ + +K F +P V
Sbjct: 536 SFLDLISYALGKS---GVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQAGGVALN 592
Query: 1903 XXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSV 1962
+A + ++ WNP + QA DR HR+GQ K V V R IM T+EEK+++LQ+ K +
Sbjct: 593 LTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKKEDL 652
Query: 1963 ANAVI-NSENASMKTM 1977
+ + +SE A ++ +
Sbjct: 653 FESTLGDSEEAVVQKL 668
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/501 (25%), Positives = 213/501 (42%), Gaps = 52/501 (10%)
Query: 1462 INWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLLPSLIICPSTLV 1521
++ L F R + D+MGLGKTLQA AI I+E L++CP+ L
Sbjct: 209 LDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISEGSI----------LVVCPAVLR 258
Query: 1522 GHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFCKHNVIITSYDVVRKDIDYLGQLFW 1581
WA E+E+++ + S + V D + K V++ SY +++ + + W
Sbjct: 259 FTWAEELERWLPSCLPSDVHLVFGHQDNPAYLPRWPK--VVVISYKMLQHLRTTMLEREW 316
Query: 1582 NYCILDEGHIIKNAKSK-------VTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLM 1634
I+DE H ++ +K K L V + K +H ++LSGTP + D++ + L
Sbjct: 317 ALLIVDESHHLRCSKKKSDPPEIKTVLDVAE-KVKHIILLSGTPSVSRPFDIFHQINMLW 375
Query: 1635 PGFLGTER-QFQGTYGKPLLASRDPKCSAKDAEAGALAME---ALHKQVMPFLLRRTKDE 1690
PG LG ++ +F TY + L +D G +E L++ VM +RR K
Sbjct: 376 PGLLGKDKYEFAKTYCEVGLVRGIQGKIFQDFSKGTRLLELNILLNQTVM---IRRLKQH 432
Query: 1691 VLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPA-AAEGSSRNTKAA 1749
+L+ LP K Q L + L KQ+ ++ E + + ++R + A
Sbjct: 433 LLTQLPPKRRQIVTILLKKSDIALAMAIVSEAKKQKDGAIAEVTEKSHEPDQNARGSNEA 492
Query: 1750 SHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVALH 1809
HV S G D + + +L S + KL + ++LH
Sbjct: 493 GHVNAE-------------NSDGPNSDKENQLCGKL----SYQQLGIAKLSAFREWLSLH 535
Query: 1810 EILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSV 1869
+L G+D + E ++++FA H LD I+ + K + ++R+DG+
Sbjct: 536 PLLS----GLDYTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICD---KGIGFVRIDGTT 588
Query: 1870 EPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAH 1929
P R V++F + + +A +VF+E P QA DRAH
Sbjct: 589 LPRDRQLAVQSFQFSSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAH 648
Query: 1930 RLGQKKVVNVHRLIMRGTLEE 1950
R GQ VNV+ + T++E
Sbjct: 649 RRGQTSAVNVYIFCAKDTMDE 669
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 167/369 (45%), Gaps = 76/369 (20%)
Query: 1450 LKVTLRRYQQEGINWLAFLKRFK---LHGILCDDMGLGKTLQASAIV------------- 1493
L V+L R+Q+ ++W++ + GIL DD GLGKT+ A++
Sbjct: 538 LAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYLPCEE 597
Query: 1494 -----ASDIAEHRTPIGNDDLL--------------PSLIICPSTLVGHWAFEIEKYIDV 1534
+ ++H + N++ + +LI+CP++L+ WA E+ K + +
Sbjct: 598 DSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRKKVTL 657
Query: 1535 SV-ISSLQYVGSAPDRMLLRDNFCKHNVIITSYDVV--RKDIDY---------LGQLFWN 1582
+S L Y G + R K++V+IT+Y +V RK +D L Q+ W
Sbjct: 658 EAHLSVLVYHGCS--RTKDPHELAKYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQVSWF 715
Query: 1583 YCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTER 1642
+LDE IKN K++ ++A L A+ R LSGTPIQN+I DL+S F FL + +
Sbjct: 716 RVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQ 775
Query: 1643 QFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLS-----DLPE 1697
F T P+ S+ E G ++A+ K+VM LRRTKD +L LP
Sbjct: 776 TFCETIKNPI--------SSYPGE-GYKTLQAILKKVM---LRRTKDTLLDGKPVISLPP 823
Query: 1698 KIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQ 1757
K I+ R D + + Y +K E S E A A +N ++ L
Sbjct: 824 KSIELRRVDFTKEERDFY-------SKLECDSRDQFKEYAEAGTVKQN---YVNILLMLL 873
Query: 1758 YLLKLCSHP 1766
L + C HP
Sbjct: 874 RLRQACGHP 882
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Query: 1826 GTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDP 1885
G V++ + ++F Q LD++E L + + Y R DG + R V+ FN+ P
Sbjct: 1065 GVVNVAGEKAIVFTQWTKMLDLLEAGLKSS---GIQYRRFDGKMTVPARDAAVQDFNTLP 1121
Query: 1886 TIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMR 1945
+ V +A ++ ++ WNP + QA+DRAHR+GQ + V V R ++
Sbjct: 1122 DVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVK 1181
Query: 1946 GTLEEKVMSLQRFKLS-VANAVINSENASMKT 1976
T+E+++++LQ+ K VA+A EN S ++
Sbjct: 1182 DTVEDRILALQQKKRKMVASAFGEHENGSRES 1213
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 147/350 (42%), Gaps = 80/350 (22%)
Query: 1475 GILCDDMGLGKTL-----------------------QASAIVASDIAEHRTP-------I 1504
GIL D MGLGKT+ + +++S + + +P +
Sbjct: 415 GILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFL 474
Query: 1505 GNDDLL----------PSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVG-SAPDRMLLR 1553
G D L +LI+CP TL+G W EIE + +S + G S P L
Sbjct: 475 GFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKL- 533
Query: 1554 DNFCKHNVIITSYDVVRKDI------DYLG--QLFWNYCILDEGHIIKNAKSKVTLAVKQ 1605
+ +V+IT+Y V+ + D+ G + W +LDE H IKN+KS+++LA
Sbjct: 534 --LSQSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAA 591
Query: 1606 LKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDA 1665
L A R L+GTPIQNN+ DL+SL FL GT + KP
Sbjct: 592 LVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPF------------E 639
Query: 1666 EAGALAMEALHKQVMPFLLRRTKDEVLSD------LPEKIIQDRYCDLSPVQLKLYEQFS 1719
E ++ + + P +LRRTK + LP + YC+LS + Y+
Sbjct: 640 EGDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALF 699
Query: 1720 GSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLLV 1769
R+K + V +G + A+ + + L L + C HP LV
Sbjct: 700 -KRSKVKFDQFV-------EQGKVLHNYAS--ILELLLRLRQCCDHPFLV 739
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 1801 HSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNV 1860
S K+ AL E LE G+ +SGS + ++F+Q AFLD+++ L + N
Sbjct: 861 ESSKITALLEELE----GLRSSGS---------KSILFSQWTAFLDLLQIPLSRN---NF 904
Query: 1861 TYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMR 1920
+++RLDG++ ++R +++K F+ D +I V +A ++ WNP
Sbjct: 905 SFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAV 964
Query: 1921 DHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQ-RFKLSVANAVINSENASMK 1975
+ QA+ R HR+GQ K V + R I++GT+EE++ ++Q R + ++ A+ + E S +
Sbjct: 965 EEQAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAVQARKQRMISGALTDQEVRSAR 1020
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 60/292 (20%)
Query: 1475 GILCDDMGLGKTLQASAIVASDI---AEHRTP---------------------------- 1503
G+ DDMGLGKTL +++A D A TP
Sbjct: 262 GVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKIEKKGKKRGRGKSSESV 321
Query: 1504 ----IGNDDLL-------PSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLL 1552
+ DD++ +LI+CP +++ W ++E++ ++ Y G +R
Sbjct: 322 TRKKLKTDDVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGG--ERTDD 379
Query: 1553 RDNFCKHNVIITSYDVVRKDIDY----LGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKA 1608
+ K+++++T+Y + + + + ++ W ILDE H IKNA ++ + V +LKA
Sbjct: 380 VNELMKYDIVLTTYGTLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKA 439
Query: 1609 QHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAG 1668
R ++GTPIQN DL+SL FL + +Q +PL +
Sbjct: 440 SRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPL------------GQGN 487
Query: 1669 ALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSG 1720
+ L + LRRTK++ L LP K ++ Y +LSP + +LY+ G
Sbjct: 488 KKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEG 539
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 1836 LIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAF-NSDPTIDVXXXXX 1894
++F+Q + L ++E L T LRLDG++ +KR +++ F N + T V
Sbjct: 710 VVFSQFRKMLLLLETPL---KAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLAS 766
Query: 1895 XXXXXXXXXXSADTLVFV-EHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVM 1953
+A + V++ + WNP + QAMDR HR+GQK+ V + R+I R ++EE+V+
Sbjct: 767 LKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVL 826
Query: 1954 SLQRFKLSVAN 1964
LQ+ K ++AN
Sbjct: 827 ELQQKKKNLAN 837
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 160/390 (41%), Gaps = 73/390 (18%)
Query: 1419 GEGVSRNAEDLHFLEQLLDNSHIEDYELCTEL--KVTLRRYQQEGINWLAFLKRFKLHGI 1476
G V + AE LH E Y +C E + L + E + GI
Sbjct: 633 GIDVEKAAETLH--------PCWEAYRICDERAPSIYLNIFSGEATIQFPTATQMARGGI 684
Query: 1477 LCDDMGLGKTLQASAIVASDIAEHRTPIGNDDLL-------------------------P 1511
L D MGLGKT+ A++ + R N+D+L
Sbjct: 685 LADAMGLGKTVMTIALILARPG--RGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGG 742
Query: 1512 SLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFCKHNVIITSYDVV-- 1569
+LIICP L+ W E+E + +S L Y G DR H+V++T+Y V+
Sbjct: 743 TLIICPMALLSQWKDELETHSKPDTVSVLVYYGG--DRTHDAKAIASHDVVLTTYGVLTS 800
Query: 1570 --RKDI--DYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMD 1625
++D+ ++ W +LDE H IK+ K++ A +L + R L+GTP+QN + D
Sbjct: 801 AYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLED 860
Query: 1626 LWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLR 1685
L+SL FL + KP + DP+ ++ + + P +LR
Sbjct: 861 LYSLLCFLHVEPWCNWAWWSKLIQKP-YENGDPR-----------GLKLIKAILRPLMLR 908
Query: 1686 RTKD------EVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAA 1739
RTK+ ++ +LP +Q C+ S + Y R+K + V A
Sbjct: 909 RTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTAL-FKRSKVQFDQFV-------A 960
Query: 1740 EGSSRNTKAASHVFQALQYLLKLCSHPLLV 1769
+G + A ++ + L L + C+HP LV
Sbjct: 961 QGKVLHNYA--NILELLLRLRQCCNHPFLV 988
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 1783 SELFPAGSDVISELHKLHHSPKLVALHEILEECGIGVDASGSEGTVSIGQHRVLIFAQHK 1842
+EL +D I + + + + + E+L+ C + SGS G SI +F+Q
Sbjct: 1086 TELISCPTDSIFRVDVVKNWKESSKVSELLK-CLEKIKKSGS-GEKSI------VFSQWT 1137
Query: 1843 AFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXXXXXXXXXXX 1902
+FLD++E L + +LR DG + + R +++K FN +
Sbjct: 1138 SFLDLLEIPL---RRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLN 1194
Query: 1903 XXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQ-RFKLS 1961
+A ++ ++ WNP + QA+ R HR+GQK+ V V R I++ T+EE++ +Q R +
Sbjct: 1195 LTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQARKQRM 1254
Query: 1962 VANAVINSENASMK 1975
+A A+ + E S +
Sbjct: 1255 IAGALTDEEVRSAR 1268
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 167/413 (40%), Gaps = 120/413 (29%)
Query: 1450 LKVTLRRYQQEGINWLAFLKRFK---LHGILCDDMGLGKTLQASAIV------------- 1493
L V+L R+Q+ ++W++ + GIL DD GLGKT+ A++
Sbjct: 537 LAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYLPCEE 596
Query: 1494 -----ASDIAEHRTPIGNDDLL--------------PSLIICPSTLVGHWAFEIEKYIDV 1534
+ ++H + N++ + +LI+CP++L+ WA E+ K + +
Sbjct: 597 DSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRKKVTL 656
Query: 1535 SV-ISSLQYVGSAPDRMLLRDNFCKHNVIITSYDVV------------------------ 1569
+S L Y G + R K++V+IT+Y +V
Sbjct: 657 EAHLSVLVYHGCS--RTKDPHELAKYDVVITTYSLVSVEVPKQPRDRADEEKGGIHDGGV 714
Query: 1570 ----------------------RKDIDY---------LGQLFWNYCILDEGHIIKNAKSK 1598
RK +D L Q+ W +LDE IKN K++
Sbjct: 715 ESVGFGSNKKDLPNSQKKGTKKRKHMDCEPVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQ 774
Query: 1599 VTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDP 1658
++A L A+ R LSGTPIQN+I DL+S F FL + + F T P+
Sbjct: 775 ASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCETIKNPI------ 828
Query: 1659 KCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLS-----DLPEKIIQDRYCDLSPVQLK 1713
S+ E G ++A+ K+VM LRRTKD +L LP K I+ R D + +
Sbjct: 829 --SSYPGE-GYKTLQAILKKVM---LRRTKDTLLDGKPVISLPPKSIELRRVDFTKEERD 882
Query: 1714 LYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHP 1766
Y +K E S E A A +N ++ L L + C HP
Sbjct: 883 FY-------SKLECDSRDQFKEYAEAGTVKQN---YVNILLMLLRLRQACGHP 925
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Query: 1826 GTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDP 1885
G V++ + ++F Q LD++E L + + Y R DG + R V+ FN+ P
Sbjct: 1108 GVVNVAGEKAIVFTQWTKMLDLLEAGLKSS---GIQYRRFDGKMTVPARDAAVQDFNTLP 1164
Query: 1886 TIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMR 1945
+ V +A ++ ++ WNP + QA+DRAHR+GQ + V V R ++
Sbjct: 1165 DVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVK 1224
Query: 1946 GTLEEKVMSLQRFKLS-VANAVINSENASMKT 1976
T+E+++++LQ+ K VA+A EN S ++
Sbjct: 1225 DTVEDRILALQQKKRKMVASAFGEHENGSRES 1256
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 125/274 (45%), Gaps = 47/274 (17%)
Query: 1450 LKVTLRRYQQEGINWLAFLKRFKLH---GILCDDMGLGKTLQASAIVA----SDIAEHRT 1502
L V L R+Q+ +NW+ ++ H GIL DD GLGKT+ +++ ++ R
Sbjct: 49 LTVPLMRHQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRK 108
Query: 1503 PIGNDDLLPSLIICPSTLVGHWAFEI-EKYIDVSVISSLQYVGSA----PDRMLLRD--- 1554
G + +LI+CP+++V WA E+ EK D +S L + GS P + + D
Sbjct: 109 RKGQNSG-GTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVM 167
Query: 1555 -------NFCKHNVIITSYDVVR------------KDIDYLGQLFWNYCILDEGHIIKNA 1595
N N ++ YD +R + LG++ W +LDE H IKN
Sbjct: 168 TTYAIVTNEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNH 227
Query: 1596 KSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLAS 1655
++ + A L+A+ R L+GTPI+N + DL+S F FL F P+
Sbjct: 228 RTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPI--- 284
Query: 1656 RDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKD 1689
K G ++A+ + +M LRRTK+
Sbjct: 285 ------DKKPLHGYKKLQAILRGIM---LRRTKE 309
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 44/67 (65%)
Query: 1905 SADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVAN 1964
+A ++ ++ WNP + QA+DRAHR+GQ + V V R+ ++ T+EE++++L K ++
Sbjct: 525 AASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEERILTLHERKRNIVA 584
Query: 1965 AVINSEN 1971
+ + +N
Sbjct: 585 SALGEKN 591
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 176/488 (36%), Gaps = 126/488 (25%)
Query: 1571 KDIDYLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLF 1630
K+ L + WN ILDE H IK +S AV L+A +R LSGTP+QN + +L+SL
Sbjct: 344 KEKSLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLI 403
Query: 1631 DFLMPGFLGTERQFQGTYGK------------------PLLASR----------DPKCSA 1662
FL R + + K P A R P
Sbjct: 404 RFLQI------RPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPITVY 457
Query: 1663 KDAEAGALAMEAL-HKQVMPFLLRRTKDEVLSD--LPEKIIQDRYCDLSPVQLKLYEQFS 1719
G AM L HK + LLRRTK +D LP +II R L + YE
Sbjct: 458 GSFGLGKRAMILLKHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFDYYESLY 517
Query: 1720 GSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSHPLLVSGGKIPDSFS 1779
+ ++ E ++ + G+ N A H+F L L + HP LV
Sbjct: 518 KN-SQAEFNTYIEA-------GTLMNNYA--HIFDLLTRLRQAVDHPYLV---------- 557
Query: 1780 AIFSELFPAGSDVISELHK-----LHHSPK-----LVALHEILEECGIGVDASGSEGTVS 1829
++S A ++++ E L H P H + C IG AS + T
Sbjct: 558 -VYSNSSGANANLVDENKSEQECGLCHDPAEDYVVTSCAHVFCKACLIGFSASLGKVTCP 616
Query: 1830 IGQHRVLI------FAQHKA------------FLDIIERDLFQTHMK------------- 1858
+ + +HKA L+ I+ D FQT K
Sbjct: 617 TCSKLLTVDWTTKADTEHKASKTTLKGFRASSILNRIKLDDFQTSTKIEALREEIRFMVE 676
Query: 1859 ---------------------------NVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXX 1891
V+ ++L GS+ R + F DP V
Sbjct: 677 RDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFL 736
Query: 1892 XXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEK 1951
A + ++ WNP + QA DR HR+GQ K + V R I+ T+EE+
Sbjct: 737 MSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEER 796
Query: 1952 VMSLQRFK 1959
++ LQ+ K
Sbjct: 797 ILRLQKKK 804
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 1442 EDYELCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASDIAEHR 1501
E E ++L + L RYQ+E + W ++ GIL D+MG+GKT+QA ++V + R
Sbjct: 127 ETAEPPSDLIMPLLRYQKEFLAWATKQEQSVAGGILADEMGMGKTIQAISLVLARREVDR 186
Query: 1502 TPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAPDRMLLRDNFCKHNV 1561
G + +L++CP V W EI ++ L Y G+ + + F ++
Sbjct: 187 AQFG-EAAGCTLVLCPLVAVSQWLNEIARFTSPGSTKVLVYHGAKRAKNI--KEFMNYDF 243
Query: 1562 IITSYDVVRKD 1572
++T+Y V +
Sbjct: 244 VLTTYSTVESE 254
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18 |
chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 135/312 (43%), Gaps = 62/312 (19%)
Query: 1423 SRNAEDLHFLEQLLDNSHIEDYELCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMG 1482
SR + H E++ SHIE L +Q+EGI F+ + +L D+MG
Sbjct: 152 SRVPDLRHLYEKI--PSHIEP---------KLLPFQREGIE---FILQHGGRVLLADEMG 197
Query: 1483 LGKTLQASAIVASDIAEHRTPIGNDDLLPSLIICPSTLVGHWAFEIEKYIDV---SVISS 1539
LGKTLQA A+ + P LII PS+L HWA I +++ V ++
Sbjct: 198 LGKTLQAIAVTTC----------VQESWPVLIIAPSSLRLHWATMIHQWLHVPPSDIVVV 247
Query: 1540 LQYVGSAPDRMLLRDNFCKHNVI---------------ITSYDVVRKDIDYLGQLFWNYC 1584
L G + N C ++ I SYDVV K L L +
Sbjct: 248 LPQPGGS--------NKCGFTIVSSNTKGTIHLDGVFNIVSYDVVTKLDKLLMALDFKVV 299
Query: 1585 ILDEGHIIKNAKSKVTLAVKQL--KAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTER 1642
I DE H +KN ++K T A + KAQ+ ++LSGTP + ++L+ + L P
Sbjct: 300 IADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYRNIH 359
Query: 1643 QFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQV-MPFLLRRTKDEVLSDLPEKIIQ 1701
++ G Y K GA + LH + ++RR K +VL++LP K Q
Sbjct: 360 EYGGRYCKGGFFG---------TYQGASNHDELHNLMKATVMIRRLKKDVLTELPSKRRQ 410
Query: 1702 DRYCDLSPVQLK 1713
+ DL+ +K
Sbjct: 411 QVFLDLAAKDMK 422
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 1834 RVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVXXXX 1893
+ L+FA H++ L+ + + L + K V +R+DGS R +V F I
Sbjct: 486 KFLVFAHHQSMLEELHQFLKK---KKVGCIRIDGSTPASSRQALVSDFQDKDEIKAAVLS 542
Query: 1894 XXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVM 1953
+A T++F E W P QA DRAHR+GQ VN+H L+ T+++ +
Sbjct: 543 IRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIW 602
Query: 1954 SLQRFKL-SVANAVINSENA 1972
+ + KL ++ + ENA
Sbjct: 603 DVVQSKLDNLGQMLDGQENA 622
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 209/492 (42%), Gaps = 101/492 (20%)
Query: 1513 LIICPSTLVGHWAFEIEKY---IDVSVISSLQYVG---SAPDRMLLRDNFCKHN------ 1560
+II P++L+ WA E +K+ I +SSL + G SA +L++ N +
Sbjct: 890 VIIAPASLLLTWAEEFKKWNISIPFHNLSSLDFTGKENSAALGLLMQKNATARSNNEIRM 949
Query: 1561 -----------VIITSYDV----------------VR-----KDIDYLGQLFWN---YCI 1585
++ SY++ VR K++D + ++ +
Sbjct: 950 VKIYSWIKSKSILGISYNLYEKLAGVKDEDKKTKMVREVKPDKELDDIREILMGRPGLLV 1009
Query: 1586 LDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQ 1645
LDE H +N +S + + +++ Q R++LSGTP QNN ++L ++ P +L ER
Sbjct: 1010 LDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYL--ERLTS 1067
Query: 1646 GTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRYC 1705
+ ++ K + + E +E L ++PF+ + S LP +++
Sbjct: 1068 TLKKSGMTVTKRGKKNLGN-EINNRGIEELKAVMLPFVHVHKGSILQSSLPG--LRECVV 1124
Query: 1706 DLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQYLLKLCSH 1765
L+P +L+ ++ + S+ T+ +R TK +VF+ L + H
Sbjct: 1125 VLNPPELQ----------RRVLESIEVTH--------NRKTK---NVFETEHKLSLVSVH 1163
Query: 1766 PLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSP----KLVALHEILEECGIGVDA 1821
P LVS KI + E ++++L K+ P K L E +E C
Sbjct: 1164 PSLVSRCKISE------KERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELC------ 1211
Query: 1822 SGSEGTVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNV--TYLRLDGSVEPEKRFEIVK 1879
+ + +VL+F+Q+ L +I + L N L + G +E ++R ++
Sbjct: 1212 -------EVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLIN 1264
Query: 1880 AFNSDP--TIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVV 1937
FN DP V A ++ ++ WNP + QA+ RA+R+GQK++V
Sbjct: 1265 EFN-DPKSKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIV 1323
Query: 1938 NVHRLIMRGTLE 1949
+ L+ +GT E
Sbjct: 1324 YTYHLVAKGTPE 1335
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 1776 DSFSAIFSELFPAGS-------DVISELHKLHHSPKLVALHEILEECGIGVDASGSEGT- 1827
+S S E P GS +++ L K H + E E G+ + +EG
Sbjct: 897 NSLSPCSDEDLPYGSSKIKAALEILQSLPKAHDLTDSNQISENREYSGLSITPVKNEGMS 956
Query: 1828 ----VSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNS 1883
+ + + ++F+Q L+++E L +H++ Y RLDG++ R + V+ FN+
Sbjct: 957 VDVPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQ---YRRLDGTMSVAARDKAVQDFNT 1013
Query: 1884 DPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLI 1943
P + V +A ++ ++ WNP + QA+DRAHR+GQ + V V R
Sbjct: 1014 LPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFT 1073
Query: 1944 MRGTLEEKVMSLQRFK-LSVANAVINSENASMKT 1976
++ T+E+++++LQ+ K + VA+A E S ++
Sbjct: 1074 VKDTVEDRILALQQKKRMMVASAFGEDEKGSRQS 1107
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 1576 LGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMP 1635
L ++ W +LDE IKN K++V A L+A+ R LSGTPIQN+I DL+S F FL
Sbjct: 624 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 683
Query: 1636 GFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLS-- 1693
+ F T P+ +R+P G ++A+ K VM LRRTK +L
Sbjct: 684 DPYSSYVLFCSTIKNPI--TRNPV-------KGYQKLQAILKTVM---LRRTKGSLLDGK 731
Query: 1694 ---DLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAAS 1750
LP K I+ R D + + Y +K E S E A A +N
Sbjct: 732 PIISLPPKSIELRKVDFTVEERDFY-------SKLEAESRTQFREYAEAGTVKQNY---V 781
Query: 1751 HVFQALQYLLKLCSHPLLVSG 1771
++ L L + C HPLLV+G
Sbjct: 782 NILLMLLRLRQACDHPLLVNG 802
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 1776 DSFSAIFSELFPAGS-------DVISELHKLHHSPKLVALHEILEECGIGVDASGSEG-- 1826
+S S E P GS +++ L K H + E E G+ + +EG
Sbjct: 1055 NSLSPCSDEDLPYGSSKIKAALEILQSLPKAHDLTDSNQISENREYSGLSITPVKNEGMS 1114
Query: 1827 ---TVSIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNS 1883
+ + + ++F+Q L+++E L +H++ Y RLDG++ R + V+ FN+
Sbjct: 1115 VDVPIKVAGEKAIVFSQWTKMLNLLEASLVSSHIQ---YRRLDGTMSVAARDKAVQDFNT 1171
Query: 1884 DPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLI 1943
P + V +A ++ ++ WNP + QA+DRAHR+GQ + V V R
Sbjct: 1172 LPEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFT 1231
Query: 1944 MRGTLEEKVMSLQRFK-LSVANAVINSENASMKT 1976
++ T+E+++++LQ+ K + VA+A E S ++
Sbjct: 1232 VKDTVEDRILALQQKKRMMVASAFGEDEKGSRQS 1265
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 1576 LGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMP 1635
L ++ W +LDE IKN K++V A L+A+ R LSGTPIQN+I DL+S F FL
Sbjct: 782 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 841
Query: 1636 GFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLS-- 1693
+ F T P+ +R+P G ++A+ K VM LRRTK +L
Sbjct: 842 DPYSSYVLFCSTIKNPI--TRNPV-------KGYQKLQAILKTVM---LRRTKGSLLDGK 889
Query: 1694 ---DLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAAS 1750
LP K I+ R D + + Y +K E S E A A +N
Sbjct: 890 PIISLPPKSIELRKVDFTVEERDFY-------SKLEAESRTQFREYAEAGTVKQNY---V 939
Query: 1751 HVFQALQYLLKLCSHPLLVSG 1771
++ L L + C HPLLV+G
Sbjct: 940 NILLMLLRLRQACDHPLLVNG 960
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 1576 LGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMP 1635
L ++ W +LDE IKN K++V A L+A+ R LSGTPIQN+I DL+S F FL
Sbjct: 789 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 848
Query: 1636 GFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLS-- 1693
+ F T P+ +R+P G ++A+ K VM LRRTK +L
Sbjct: 849 DPYSSYVLFCSTIKNPI--TRNPV-------KGYQKLQAILKTVM---LRRTKGSLLDGK 896
Query: 1694 ---DLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAAS 1750
LP K I+ R D + + Y +K E S E A A +N
Sbjct: 897 PIISLPPKSIELRKVDFTVEERDFY-------SKLEAESRTQFREYAEAGTVKQNY---V 946
Query: 1751 HVFQALQYLLKLCSHPLLVSG 1771
++ L L + C HPLLV+G
Sbjct: 947 NILLMLLRLRQACDHPLLVNG 967
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 1831 GQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDVX 1890
G + +IF+Q LD++E L + ++ + RLDG++ R VK F++DP + V
Sbjct: 825 GPIKTIIFSQWTGMLDLVELSLIEN---SIEFRRLDGTMSLIARDRAVKEFSNDPDVKVM 881
Query: 1891 XXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEE 1950
+A ++ ++ WNP + QA+DRAHR+GQ + V V R+ ++ T+E+
Sbjct: 882 IMSLKAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVED 941
Query: 1951 KVMSLQRFK 1959
++++LQ K
Sbjct: 942 RILALQEEK 950
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 148/375 (39%), Gaps = 94/375 (25%)
Query: 1512 SLIICPSTLVGHWAFEI-EKYIDVSVISSLQYVGS------------------------- 1545
+LI+CP+++V WA E+ EK D + +S L Y G
Sbjct: 345 TLIVCPASVVRQWARELDEKVTDEAKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNE 404
Query: 1546 APDRMLLRD-------------------NFCKHNVIITSY------------DVVRKDID 1574
P + L+ D N + NV+ T+ D D
Sbjct: 405 VPKQPLVDDDENDEKNSEKYGLASGFSINKKRKNVVGTTKKSKKKKGNNNAGDSSDPDSG 464
Query: 1575 YLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLM 1634
L ++ W +LDE IKN +++V A L+A+ R LSGTPIQN I DL+S F FL
Sbjct: 465 TLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLK 524
Query: 1635 PGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLS- 1693
+ F P+ ++++ G ++A+ + +M LRRTK +L
Sbjct: 525 YDPYAVYKSFCHQIKGPI---------SRNSLQGYKKLQAVLRAIM---LRRTKGTLLDG 572
Query: 1694 ----DLPEKIIQDRYCDLSPVQLKLYEQF-SGSRAKQEMSSVVTTNEPAAAEGSSRNTKA 1748
+LP K I D S + Y + S SR++ + A A + N
Sbjct: 573 QPIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFK----------AYAAAGTLNQNY 622
Query: 1749 ASHVFQALQYLLKLCSHPLLVSGGKIPDSFSAIFSELFP--AGSDVISELHKLHHSPKLV 1806
A+ + L+ L + C HP LV DS + E D++S L +L SP
Sbjct: 623 ANILLMLLR-LRQACDHPQLVKRYN-SDSVGKVSEEAVKKLPKEDLVSLLSRLESSPICC 680
Query: 1807 ALHEILEE-----CG 1816
H+ E+ CG
Sbjct: 681 VCHDPPEDPVVTLCG 695
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 74/276 (26%)
Query: 1512 SLIICPSTLVGHWAFEI-EKYIDVSVISSLQYVGS------------------------- 1545
+LI+CP+++V WA E+ EK + S +S L Y GS
Sbjct: 416 TLIVCPASVVRQWARELDEKVSEESKLSVLVYHGSNRTKDPNELAEYDVVVTTYAIVTNE 475
Query: 1546 APDRMLLRD------------------NFCKHNVIITSYDVVRK-------------DID 1574
AP++ L+ + N K V++ + ++ D
Sbjct: 476 APNKFLVDEDENDEKNTDRYGLASGFSNNKKRKVVVGASKKSKRRGRKSTNDTSSEPDCG 535
Query: 1575 YLGQLFWNYCILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLM 1634
LG++ W +LDE IKN ++++ + L+A+ R LSGTPIQN I DL+S F FL
Sbjct: 536 PLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLR 595
Query: 1635 PGFLGTERQFQGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLS- 1693
+ F T P+ ++++ G ++A+ + +M LRRTK +L
Sbjct: 596 YDPYAVYKSFYSTIKVPI---------SRNSCQGYKKLQAVLRAIM---LRRTKGTLLDG 643
Query: 1694 ----DLPEKIIQDRYCDLSPVQLKLYEQFSGSRAKQ 1725
+LP K++ D S + Y++ Q
Sbjct: 644 KPIINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQ 679
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 1829 SIGQHRVLIFAQHKAFLDIIERDLFQTHMKNVTYLRLDGSVEPEKRFEIVKAFNSDPTID 1888
S G + +IF+Q LD++E + ++ + + RLDG++ R VK F+ P +
Sbjct: 889 SQGAVKTIIFSQWTGMLDLVELRILES---GIEFRRLDGTMSLAARDRAVKEFSKKPDVK 945
Query: 1889 VXXXXXXXXXXXXXXXSADTLVFVEHDWNPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTL 1948
V +A ++ ++ WNP + QA+DRAHR+GQ + V V R+ ++ T+
Sbjct: 946 VMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTV 1005
Query: 1949 EEKVMSLQRFKLSVANAVINSENA 1972
E++++ LQ K ++ + E+
Sbjct: 1006 EDRILKLQEEKRTMVASAFGEEHG 1029
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 163/414 (39%), Gaps = 75/414 (18%)
Query: 1585 ILDEGHIIKNAKSKVTLAVKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQF 1644
+LDEGH ++ KS++ A+ ++ R++LSGT QNN + ++ P F+
Sbjct: 847 VLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCEYFNTLCLARPKFV------ 900
Query: 1645 QGTYGKPLLASRDPKCSAKDAEAGALAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRY 1704
+L D K AE A P LL + D+ K I +
Sbjct: 901 -----HEVLVELDKKFQTNQAEQKA-----------PHLLENRARKFFLDIIAKKIDTKV 944
Query: 1705 CDLSPVQLKLYEQFSGSRAKQEMSSVVTTNEPAAAEGSSRNTKAASHVFQALQ-YLLKLC 1763
D E+ G + M+S N + GS V LQ Y L +
Sbjct: 945 GD---------ERLQGLNMLRNMTSGFIDNYEGSGSGSG-------DVLPGLQIYTLLMN 988
Query: 1764 S----HPLLVSGGKIPDSFSAIFSELFPAGSDVISELHKLHHSPKLVAL----------H 1809
S H L I ++ +P +++ L +H P LV
Sbjct: 989 STDVQHKSLTKLQNIMSTYHG-----YPLELELLITLAAIH--PWLVKTTTCCAKFFNPQ 1041
Query: 1810 EILEECGIGVDASGSEGTV--------SIGQHRVLIFAQHKA----FLDIIERDLFQTHM 1857
E+LE + DA + + + ++LIF + A FL++ E ++F+
Sbjct: 1042 ELLEIEKLKHDAKKGSKVMFVLNLVFRVVKREKILIFCHNIAPIRLFLELFE-NVFRWK- 1099
Query: 1858 KNVTYLRLDGSVEPEKRFEIVKAFNS-DPTIDVXXXXXXXXXXXXXXXSADTLVFVEHDW 1916
+ L L G +E +R ++ F V +A ++ ++ +W
Sbjct: 1100 RGRELLTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEW 1159
Query: 1917 NPMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINSE 1970
NP + QA+ RA R GQ+KVV V++L+ RGTLEE +K V++ + + E
Sbjct: 1160 NPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSEE 1213
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 118/298 (39%), Gaps = 49/298 (16%)
Query: 1512 SLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGS-----APDRMLLRDNFCKHNVIITSY 1566
+LI+CP+ ++ W EI ++ + + + Y G + + M+ ++++T+Y
Sbjct: 502 TLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMIDITELLNADIVLTTY 561
Query: 1567 DVVRKDIDY------------------------LGQLFWNYCILDEGHIIKNAKSKVTLA 1602
DV+++D+ + L ++FW LDE ++++ + T
Sbjct: 562 DVLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQMVESNAAAATEM 621
Query: 1603 VKQLKAQHRLILSGTPIQNNIMDLWSLFDFLMPGFLGTERQFQGTYGKPLLASRDPKCSA 1662
+L +HR ++GTPIQ + DL+ L FL R + P RD K
Sbjct: 622 ALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKANPFDVSRWWIEVIRDP-YERRDTK--- 677
Query: 1663 KDAEAGALAMEALHKQVMPFLLRRTKDEVLSD--LPEKIIQDRYCDLSPVQLKLYEQFSG 1720
AME HK + R +K V + LP + + S ++ Y +
Sbjct: 678 --------AMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLKFSAIEEHFYSRQHD 729
Query: 1721 SRAKQEMSSVVTTNEPAAAEG-SSRNTKAASHVFQA--LQYLLKL---CSHPLLVSGG 1772
+ + T G +S + +H A L LLKL C HP + S G
Sbjct: 730 TCVSYAREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHPQVGSSG 787