Miyakogusa Predicted Gene

Lj3g3v3752070.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3752070.2 tr|G7LBJ9|G7LBJ9_MEDTR Malate dehydrogenase
OS=Medicago truncatula GN=MTR_8g005980 PE=3 SV=1,88.11,0,MDH,Malate
dehydrogenase, active site; SUBFAMILY NOT NAMED,NULL; MALATE
DEHYDROGENASE,Malate dehydro,CUFF.46295.2
         (371 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G56720.1 | Symbols:  | Lactate/malate dehydrogenase family pr...   523   e-148
AT1G04410.1 | Symbols:  | Lactate/malate dehydrogenase family pr...   517   e-147
AT5G43330.1 | Symbols:  | Lactate/malate dehydrogenase family pr...   516   e-146
AT5G58330.1 | Symbols:  | lactate/malate dehydrogenase family pr...   243   2e-64
AT5G58330.2 | Symbols:  | lactate/malate dehydrogenase family pr...   242   3e-64
AT5G58330.3 | Symbols:  | lactate/malate dehydrogenase family pr...   231   9e-61
AT3G47520.1 | Symbols: MDH | malate dehydrogenase | chr3:1751365...    59   6e-09

>AT5G56720.1 | Symbols:  | Lactate/malate dehydrogenase family
           protein | chr5:22945537-22946718 FORWARD LENGTH=339
          Length = 339

 Score =  523 bits (1346), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 240/338 (71%), Positives = 279/338 (82%)

Query: 34  MCGLLKVEKEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGV 93
           MC LL +EK+P+ VL+TGAAG IGYA+ PMIARG+MLGP+QP+ LH+LDIEPA+ +L+ V
Sbjct: 1   MCNLLNIEKDPIRVLITGAAGNIGYAIAPMIARGIMLGPDQPMILHLLDIEPASSSLEAV 60

Query: 94  KMELTDAAFPLLKGVVATTDVVEACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXX 153
           KMEL D+AFPLLKGV+ATT+VVEACKDVNI IM+GGFPR  GMERKDVMSKNV IYK   
Sbjct: 61  KMELQDSAFPLLKGVIATTNVVEACKDVNIVIMIGGFPRIAGMERKDVMSKNVVIYKAQA 120

Query: 154 XXXXXXXXXDCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISERINV 213
                    DCKVLVVANPANTNALILKEFAPSIP +NITCLTRLDHNRAL Q++++++V
Sbjct: 121 SALERYASDDCKVLVVANPANTNALILKEFAPSIPEENITCLTRLDHNRALAQLADKLSV 180

Query: 214 HVSDVKNVIIWGNHSSTQYPDVNHATITTSGGMKPVRDLIADHNWLNTEFITTVQQRGAA 273
            VS VKNVI+WGNHSSTQYPD NHAT++T  G +P+++L+ DHNWL  EFI  VQQRGAA
Sbjct: 181 PVSSVKNVIVWGNHSSTQYPDTNHATVSTKTGDRPLKELVTDHNWLKNEFIVEVQQRGAA 240

Query: 274 IIKARKXXXXXXXXXXXCDHIRDWVLGTPKGTWVSMGVCSDGSYGIQPGLIYSFPVTCEK 333
           +++ARK           CDHIRDW LGTPKGTWVSMGVCSDGSYGI PGL+YSFPV CEK
Sbjct: 241 VLRARKQSSAFSAAGAACDHIRDWFLGTPKGTWVSMGVCSDGSYGIPPGLVYSFPVICEK 300

Query: 334 GEWNIVQGLKIDQFSRDKMDKTAQELIEEKTLAKSCLN 371
           G W IVQGL ID+FSR+KMD +A+EL EEK LA SCLN
Sbjct: 301 GSWKIVQGLSIDEFSREKMDDSARELAEEKDLAYSCLN 338


>AT1G04410.1 | Symbols:  | Lactate/malate dehydrogenase family
           protein | chr1:1189418-1191267 REVERSE LENGTH=332
          Length = 332

 Score =  517 bits (1332), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/330 (76%), Positives = 274/330 (83%)

Query: 42  KEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAA 101
           KEPV VLVTGAAGQIGYALVPMIARG+MLG +QPV LHMLDI PAAEAL GVKMEL DAA
Sbjct: 3   KEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPPAAEALNGVKMELIDAA 62

Query: 102 FPLLKGVVATTDVVEACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXX 161
           FPLLKGVVATTD VE C  VN+A+MVGGFPRKEGMERKDVMSKNVSIYK           
Sbjct: 63  FPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAA 122

Query: 162 XDCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNV 221
            +CKVLVVANPANTNALILKEFAPSIP KNI+CLTRLDHNRALGQISER++V VSDVKNV
Sbjct: 123 PNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVKNV 182

Query: 222 IIWGNHSSTQYPDVNHATITTSGGMKPVRDLIADHNWLNTEFITTVQQRGAAIIKARKXX 281
           IIWGNHSS+QYPDVNHA + TS G KPVR+L+ D  WL+ EFI+TVQQRGAAIIKARK  
Sbjct: 183 IIWGNHSSSQYPDVNHAKVQTSSGEKPVRELVKDDAWLDGEFISTVQQRGAAIIKARKLS 242

Query: 282 XXXXXXXXXCDHIRDWVLGTPKGTWVSMGVCSDGSYGIQPGLIYSFPVTCEKGEWNIVQG 341
                    CDHIRDWVLGTP+GT+VSMGV SDGSY +  GLIYSFPVTC  G+W+IVQG
Sbjct: 243 SALSAASSACDHIRDWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIVQG 302

Query: 342 LKIDQFSRDKMDKTAQELIEEKTLAKSCLN 371
           L ID+ SR KMD TA+EL EEK LA SCL+
Sbjct: 303 LPIDEVSRKKMDLTAEELKEEKDLAYSCLS 332


>AT5G43330.1 | Symbols:  | Lactate/malate dehydrogenase family
           protein | chr5:17390552-17392449 FORWARD LENGTH=332
          Length = 332

 Score =  516 bits (1329), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 254/330 (76%), Positives = 273/330 (82%)

Query: 42  KEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAA 101
           KEPV VLVTGAAGQIGYALVPMIARG+MLG +QPV LHMLDI  AAEAL GVKMEL DAA
Sbjct: 3   KEPVRVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVDAA 62

Query: 102 FPLLKGVVATTDVVEACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXX 161
           FPLLKGVVATTD VEAC  VN+A+MVGGFPRKEGMERKDVMSKNVSIYK           
Sbjct: 63  FPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAA 122

Query: 162 XDCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNV 221
            +CKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQ+SER++V VSDVKNV
Sbjct: 123 PNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNV 182

Query: 222 IIWGNHSSTQYPDVNHATITTSGGMKPVRDLIADHNWLNTEFITTVQQRGAAIIKARKXX 281
           IIWGNHSSTQYPDVNHAT+ TS G KPVR+L+ +  WLN EFI+TVQQRGAAIIKARK  
Sbjct: 183 IIWGNHSSTQYPDVNHATVKTSVGEKPVRELVKNDEWLNGEFISTVQQRGAAIIKARKLS 242

Query: 282 XXXXXXXXXCDHIRDWVLGTPKGTWVSMGVCSDGSYGIQPGLIYSFPVTCEKGEWNIVQG 341
                    CDHIRDWV+GTP+GT+VSMGV SDGSY +  GLIYSFPVTC  GEW IVQG
Sbjct: 243 SALSAASSACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQG 302

Query: 342 LKIDQFSRDKMDKTAQELIEEKTLAKSCLN 371
           L ID  SR KMD TA+EL EEK LA SCL+
Sbjct: 303 LPIDDASRKKMDLTAEELKEEKDLAYSCLS 332


>AT5G58330.1 | Symbols:  | lactate/malate dehydrogenase family
           protein | chr5:23580010-23582287 REVERSE LENGTH=443
          Length = 443

 Score =  243 bits (619), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/324 (41%), Positives = 191/324 (58%), Gaps = 6/324 (1%)

Query: 42  KEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAA 101
           K+ + + V+GAAG I   L+  +A G + GP+QP+ L +L  E + +AL+GV MEL D+ 
Sbjct: 97  KKLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSL 156

Query: 102 FPLLKGVVATTDVVEACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXX 161
           FPLL+ V   TD  E  +DV  AI++G  PR  GMER D++  N  I+            
Sbjct: 157 FPLLREVDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAAS 216

Query: 162 XDCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNV 221
            + KVLVV NP NTNALI  + AP+IPAKN   LTRLD NRA  Q++ +  V    V N+
Sbjct: 217 PNVKVLVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNM 276

Query: 222 IIWGNHSSTQYPDVNHATITTSGGMKPVRDLIADHNWLNTEFITTVQQRGAAIIKARKXX 281
            IWGNHS+TQ PD  +A I    G+ PV+++I DH WL   F  +VQ+RG  +I+     
Sbjct: 277 TIWGNHSTTQVPDFLNARIN---GL-PVKEVITDHKWLEEGFTESVQKRGGLLIQKWGRS 332

Query: 282 XXXXXXXXXCDHIRDWVLGTPKGTWVSMGVCSDGS-YGIQPGLIYSFPVTCE-KGEWNIV 339
                     D I+  V  TP+G W S GV +DG+ YGI+ GL++S P   +  G++ +V
Sbjct: 333 SAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMPCRSKGDGDYELV 392

Query: 340 QGLKIDQFSRDKMDKTAQELIEEK 363
           + ++ID + R ++ K+  EL+ EK
Sbjct: 393 KDVEIDDYLRQRIAKSEAELLAEK 416


>AT5G58330.2 | Symbols:  | lactate/malate dehydrogenase family
           protein | chr5:23580010-23582287 REVERSE LENGTH=442
          Length = 442

 Score =  242 bits (618), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 134/324 (41%), Positives = 191/324 (58%), Gaps = 6/324 (1%)

Query: 42  KEPVTVLVTGAAGQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAA 101
           K+ + + V+GAAG I   L+  +A G + GP+QP+ L +L  E + +AL+GV MEL D+ 
Sbjct: 96  KKLINIAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSL 155

Query: 102 FPLLKGVVATTDVVEACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXX 161
           FPLL+ V   TD  E  +DV  AI++G  PR  GMER D++  N  I+            
Sbjct: 156 FPLLREVDIGTDPNEVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAAS 215

Query: 162 XDCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNV 221
            + KVLVV NP NTNALI  + AP+IPAKN   LTRLD NRA  Q++ +  V    V N+
Sbjct: 216 PNVKVLVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNM 275

Query: 222 IIWGNHSSTQYPDVNHATITTSGGMKPVRDLIADHNWLNTEFITTVQQRGAAIIKARKXX 281
            IWGNHS+TQ PD  +A I    G+ PV+++I DH WL   F  +VQ+RG  +I+     
Sbjct: 276 TIWGNHSTTQVPDFLNARIN---GL-PVKEVITDHKWLEEGFTESVQKRGGLLIQKWGRS 331

Query: 282 XXXXXXXXXCDHIRDWVLGTPKGTWVSMGVCSDGS-YGIQPGLIYSFPVTCE-KGEWNIV 339
                     D I+  V  TP+G W S GV +DG+ YGI+ GL++S P   +  G++ +V
Sbjct: 332 SAASTAVSIVDAIKSLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMPCRSKGDGDYELV 391

Query: 340 QGLKIDQFSRDKMDKTAQELIEEK 363
           + ++ID + R ++ K+  EL+ EK
Sbjct: 392 KDVEIDDYLRQRIAKSEAELLAEK 415


>AT5G58330.3 | Symbols:  | lactate/malate dehydrogenase family
           protein | chr5:23580010-23581751 REVERSE LENGTH=334
          Length = 334

 Score =  231 bits (588), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 181/310 (58%), Gaps = 6/310 (1%)

Query: 56  IGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAAFPLLKGVVATTDVV 115
           I   L+  +A G + GP+QP+ L +L  E + +AL+GV MEL D+ FPLL+ V   TD  
Sbjct: 2   ISNHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSLFPLLREVDIGTDPN 61

Query: 116 EACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXXXDCKVLVVANPANT 175
           E  +DV  AI++G  PR  GMER D++  N  I+             + KVLVV NP NT
Sbjct: 62  EVFQDVEWAILIGAKPRGPGMERADLLDINGQIFAEQGKALNKAASPNVKVLVVGNPCNT 121

Query: 176 NALILKEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNVIIWGNHSSTQYPDV 235
           NALI  + AP+IPAKN   LTRLD NRA  Q++ +  V    V N+ IWGNHS+TQ PD 
Sbjct: 122 NALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNMTIWGNHSTTQVPDF 181

Query: 236 NHATITTSGGMKPVRDLIADHNWLNTEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIR 295
            +A I    G+ PV+++I DH WL   F  +VQ+RG  +I+               D I+
Sbjct: 182 LNARIN---GL-PVKEVITDHKWLEEGFTESVQKRGGLLIQKWGRSSAASTAVSIVDAIK 237

Query: 296 DWVLGTPKGTWVSMGVCSDGS-YGIQPGLIYSFPVTCE-KGEWNIVQGLKIDQFSRDKMD 353
             V  TP+G W S GV +DG+ YGI+ GL++S P   +  G++ +V+ ++ID + R ++ 
Sbjct: 238 SLVTPTPEGDWFSTGVYTDGNPYGIEEGLVFSMPCRSKGDGDYELVKDVEIDDYLRQRIA 297

Query: 354 KTAQELIEEK 363
           K+  EL+ EK
Sbjct: 298 KSEAELLAEK 307


>AT3G47520.1 | Symbols: MDH | malate dehydrogenase |
           chr3:17513657-17514868 FORWARD LENGTH=403
          Length = 403

 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 16/192 (8%)

Query: 47  VLVTGAAGQIGYALVPMIARGMMLGPNQPVFLHMLDIEPAAEALKGVKMELTDAAFP-LL 105
           V V GAAG IG  L  +I    ++       LH+ DI      +KGV  +L+    P  +
Sbjct: 85  VAVLGAAGGIGQPLSLLIKMSPLVST-----LHLYDIA----NVKGVAADLSHCNTPSQV 135

Query: 106 KGVVATTDVVEACKDVNIAIMVGGFPRKEGMERKDVMSKNVSIYKXXXXXXXXXXXXDCK 165
           +     +++ +  KDVN+ ++  G PRK GM R D+ + N +I K            +  
Sbjct: 136 RDFTGPSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVK-TLVEAVAENCPNAF 194

Query: 166 VLVVANPANTN----ALILKEFAPSIPAKNITCLTRLDHNRALGQISERINVHVSDVKNV 221
           + +++NP N+     A +LK+     P K +  +T LD  RA   +S++ N+ + DV   
Sbjct: 195 IHIISNPVNSTVPIAAEVLKKKGVYDP-KKLFGVTTLDVVRANTFVSQKKNLKLIDVDVP 253

Query: 222 IIWGNHSSTQYP 233
           +I G+   T  P
Sbjct: 254 VIGGHAGITILP 265