Miyakogusa Predicted Gene
- Lj3g3v3751950.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3751950.1 tr|Q2HU53|Q2HU53_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_2g1,23.26,4e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; PPR: pentatricopeptide repeat
domain,Pent,CUFF.46267.1
(521 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 613 e-176
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 283 2e-76
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 281 5e-76
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 275 8e-74
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 4e-71
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 4e-71
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 2e-70
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 261 7e-70
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 259 4e-69
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 258 9e-69
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 4e-68
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 6e-68
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 7e-68
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 251 1e-66
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 2e-65
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 4e-64
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 240 2e-63
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 239 3e-63
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 239 3e-63
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 5e-63
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 5e-62
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 234 1e-61
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 234 1e-61
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 2e-61
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 233 3e-61
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 7e-61
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 8e-61
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 5e-60
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 227 1e-59
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 226 4e-59
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 7e-59
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 224 9e-59
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 5e-58
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 8e-58
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 221 8e-58
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 8e-58
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 218 6e-57
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 9e-57
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 212 4e-55
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 212 4e-55
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 6e-55
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 7e-55
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 7e-55
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 8e-55
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 1e-54
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 211 1e-54
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 210 2e-54
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 209 4e-54
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 208 8e-54
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 9e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 9e-54
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 9e-54
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 207 2e-53
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 3e-53
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 205 7e-53
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 9e-53
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 202 3e-52
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 9e-52
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 200 2e-51
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 197 2e-50
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 7e-50
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 2e-49
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 193 2e-49
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 6e-48
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 8e-48
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 186 3e-47
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 7e-47
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 3e-46
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 6e-46
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 7e-46
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 8e-46
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 2e-45
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 174 2e-43
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 173 3e-43
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 6e-42
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 167 1e-41
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 157 2e-38
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 3e-36
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 105 6e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 7e-23
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 102 8e-22
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 100 2e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 100 2e-21
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 1e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 98 1e-20
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 8e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 7e-19
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 88 1e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 86 8e-17
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 85 1e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 83 5e-16
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 5e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 77 3e-14
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 76 7e-14
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 9e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 70 2e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 70 4e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 6e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 66 7e-11
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 65 1e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 63 4e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 4e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 1e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 613 bits (1581), Expect = e-176, Method: Compositional matrix adjust.
Identities = 295/483 (61%), Positives = 372/483 (77%), Gaps = 2/483 (0%)
Query: 39 NTLSFPKPKSTPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRI-DPEIYASLLETCYR 97
+LSF KP TPLLI +Q +T+ +A++ V+ D+E S +KGI + +PEI+ASLLETCY
Sbjct: 45 TSLSFTKPSPTPLLIEKQSIHRTQLEALDSVITDLETSAQKGISLTEPEIFASLLETCYS 104
Query: 98 SQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWN 157
+AI HG +VH LIP LLR N+G++SKLVRLYAS GY E AH++FD+MS+RD+S F WN
Sbjct: 105 LRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWN 164
Query: 158 SLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRA 217
SLISGYA+LG Y+DA+ALYFQM E+GV+PD FTFPRVLK C G+G +++GE +HR V+
Sbjct: 165 SLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE 224
Query: 218 GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTF 277
GFG D LNALV MY KCG IVKAR +F+ + +D VSWNSMLT Y+HHGL EA+D F
Sbjct: 225 GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIF 284
Query: 278 CQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRL 337
MV G +PD V+IS++L V S G Q+HGWVIRRG+EW LS+AN+LI+ YSK G+L
Sbjct: 285 RLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQL 344
Query: 338 DTARWLFNLMPERDVVSWNSIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYL 397
A ++F+ M ERD VSWN+IISAH K+ L FEQM A KPD ITFVS+LS CA
Sbjct: 345 GQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANT 404
Query: 398 GLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQW 457
G+V DG RL++LM+++Y I P MEH+ CMVNLYGRAGM+E+AYS+I +G E AGPT W
Sbjct: 405 GMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLE-AGPTVW 463
Query: 458 GALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDR 517
GALLY+CYLHG+ IGE+AA +LF+LEPDNEHNF LL++IY A R ED+ERVR M+VDR
Sbjct: 464 GALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDR 523
Query: 518 GLD 520
GL+
Sbjct: 524 GLE 526
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 259/449 (57%), Gaps = 15/449 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
GI ID S+ C S+ I G VH + + + L+ +Y+ G ++ A
Sbjct: 291 GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+F +MS R S + S+I+GYA+ GL +A+ L+ +M EEG+ PD++T VL CA
Sbjct: 351 KAVFREMSDR--SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
LL+ G+ VH G D NAL+DMY KCG + +A +F+ M +D +SWN+
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCK--PDFVSISTIL---TGVSSMDLGVQIHGWVIR 314
++ Y + EA+ F ++LE + PD +++ +L +S+ D G +IHG+++R
Sbjct: 469 IIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 315 RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALAL 371
G + +ANSL+ Y+K G L A LF+ + +D+VSW +I+ + H +EA+AL
Sbjct: 528 NGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIAL 587
Query: 372 FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYG 431
F QM +AG++ D+I+FVSLL AC++ GLV++G R + +M + KI+P +EH+ C+V++
Sbjct: 588 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 432 RAGMVEKAYSIITD-GIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHN 490
R G + KAY I + I +A T WGALL C +H V + E A K+F+LEP+N
Sbjct: 648 RTGDLIKAYRFIENMPIPPDA---TIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGY 704
Query: 491 FALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ L+ IY A + E ++R+R + RGL
Sbjct: 705 YVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 201/369 (54%), Gaps = 9/369 (2%)
Query: 83 IDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
IDP S+L+ C S++++ G +V I + + SKL +Y + G +++A +
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
FD++ + A WN L++ A+ G + +I L+ +M+ GVE D +TF V K + L
Sbjct: 152 FDEV--KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
+ GE++H +++GFG N+LV Y K + ARK+F+ M RD +SWNS++
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEW 319
YV +GL + + F QM++ G + D +I ++ G + + LG +H ++
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQME 376
N+L+ YSK G LD+A+ +F M +R VVS+ S+I+ + + EA+ LFE+ME
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
E G+ PD T ++L+ CA L+++G R++ + E I + M ++Y + G +
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM-DMYAKCGSM 448
Query: 437 EKAYSIITD 445
++A + ++
Sbjct: 449 QEAELVFSE 457
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 206/402 (51%), Gaps = 19/402 (4%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ G+ +D ++ + ++ +++ G Q+H I + V + LV Y +
Sbjct: 187 MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV 246
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
+ A +FD+M++RD WNS+I+GY GL + ++++ QM+ G+E DL T V
Sbjct: 247 DSARKVFDEMTERDV--ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
CA L+ +G VH V+A F + N L+DMY KCG + A+ +F M R VS
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS 364
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVI 313
+ SM+ Y GL EA+ F +M EG PD +++ +L + +D G ++H W+
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHREALA 370
+ +++ ++N+L+ Y+K G + A +F+ M +D++SWN+II S +C EAL+
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 484
Query: 371 LFE-QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA-LMTEKYKIKPIMEHH--GCM 426
LF +EE PD+ T +L ACA L + G ++ +M Y + H +
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY----FSDRHVANSL 540
Query: 427 VNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
V++Y + G + A+ ++ D I S+ W ++ +HG
Sbjct: 541 VDMYAKCGALLLAH-MLFDDIASK--DLVSWTVMIAGYGMHG 579
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 173/376 (46%), Gaps = 50/376 (13%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLV 127
+ +K E E+GI D ++L C R + + G +VH I L ++ V++ L+
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 128 RLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEP 186
+YA G M++A +F +M +D WN++I GY++ ++A++L+ ++EE P
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKD--IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF 246
D T VL CA L + G E+H + +R G+ +D N+LVDMY KCG ++ A +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 247 NRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGV 306
+ + +D VSW M+ Y HG EA+ F QM G + D +S
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFV------------- 604
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-----ERDVVSWNSIISA 361
SL+ A S G +D FN+M E V + I+
Sbjct: 605 -------------------SLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 645
Query: 362 HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK-YKIKPIM 420
+ + + + +E + PD + +LL C ++ V+L + EK ++++P
Sbjct: 646 LARTGDLIKAYRFIENMPIPPDATIWGALLCGCR----IHHDVKLAEKVAEKVFELEP-- 699
Query: 421 EHHG---CMVNLYGRA 433
E+ G M N+Y A
Sbjct: 700 ENTGYYVLMANIYAEA 715
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 275/479 (57%), Gaps = 25/479 (5%)
Query: 61 TKHQAIEQVLKDIEASIEKGIRI-------DPEIYASLLETCYRSQAIRHGSQVHRLIPT 113
+ +Q I+ + K E +++ IR+ + Y L+ C ++ +VHR I
Sbjct: 48 SNNQLIQSLCK--EGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 114 VLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAI 173
++ + +KL+ +Y+ G ++ A +FD+ +R + + WN+L G ++ +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKR--TIYVWNALFRALTLAGHGEEVL 163
Query: 174 ALYFQMVEEGVEPDLFTFPRVLKVCAG----LGLLEVGEEVHRHAVRAGFGNDGLGLNAL 229
LY++M GVE D FT+ VLK C + L G+E+H H R G+ + + L
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTL 223
Query: 230 VDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE--GCKP 287
VDMY + G + A +F M R+ VSW++M+ Y +G EA+ TF +M+ E P
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 288 DFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLF 344
+ V++ ++L +S+ + G IHG+++RRG++ L + ++L+ Y + G+L+ + +F
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343
Query: 345 NLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVN 401
+ M +RDVVSWNS+IS++ H ++A+ +FE+M G P +TFVS+L AC++ GLV
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 402 DGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL 461
+G RL+ M + IKP +EH+ CMV+L GRA +++A ++ D + +E GP WG+LL
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQD-MRTE-PGPKVWGSLL 461
Query: 462 YSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
SC +HG+V + E A+ +LF LEP N N+ LL IY A ++++RV+ +L RGL
Sbjct: 462 GSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 188/381 (49%), Gaps = 30/381 (7%)
Query: 80 GIRIDPEIYASLLETCYRSQA----IRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGY 135
G+ D Y +L+ C S+ + G ++H + +V + + LV +YA FG
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE--PDLFTFPR 193
++ A +F M R+ + W+++I+ YA+ G +A+ + +M+ E + P+ T
Sbjct: 233 VDYASYVFGGMPVRNVVS--WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
VL+ CA L LE G+ +H + +R G + ++ALV MY +CG + +++F+RMH RD
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRD 350
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHG 310
VSWNS++++Y HG +A+ F +M+ G P V+ ++L S L G ++
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 311 WVIR-RGVEWNLSIANSLIIAYSKHGRLD-TARWLFNLMPERDVVSWNSIISAHCKHREA 368
+ R G++ + ++ + RLD A+ + ++ E W S++ + C+
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS-CRIHGN 469
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA---LMTEKYKIKPIMEHHGC 425
+ L E+ ++ + +A Y+ L + +YA + E ++K ++EH G
Sbjct: 470 VELAERASR------RLFALEPKNAGNYVLLAD----IYAEAQMWDEVKRVKKLLEHRG- 518
Query: 426 MVNLYGRAGM--VEKAYSIIT 444
+ L GR M K YS ++
Sbjct: 519 LQKLPGRCWMEVRRKMYSFVS 539
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 262/459 (57%), Gaps = 11/459 (2%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+E+ L I G+ D ++SLL + + + + + Q+H I + ++ +TS
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
L+ Y + A ++F Q + D F ++ISGY GLY D++ ++ +V+ +
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVF--TAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
P+ T +L V L L++G E+H ++ GF N A++DMY KCG + A +I
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM--- 302
F R+ +RD VSWNSM+T A+D F QM + G D VSIS L+ +++
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558
Query: 303 DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA- 361
G IHG++I+ + ++ ++LI Y+K G L A +F M E+++VSWNSII+A
Sbjct: 559 SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAAC 618
Query: 362 --HCKHREALALFEQM-EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKP 418
H K +++L LF +M E++G++PD+ITF+ ++S+C ++G V++GVR + MTE Y I+P
Sbjct: 619 GNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQP 678
Query: 419 IMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAAN 478
EH+ C+V+L+GRAG + +AY + AG WG LL +C LH +V + E+A++
Sbjct: 679 QQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAG--VWGTLLGACRLHKNVELAEVASS 736
Query: 479 KLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDR 517
KL DL+P N + L+ + NA E + +VR ++ +R
Sbjct: 737 KLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKER 775
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 165/313 (52%), Gaps = 6/313 (1%)
Query: 85 PEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFD 144
P + LL+ C +R G QVH + + + +++ +YA G D +F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 145 QMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLL 204
++ R +S PWNS+IS + + GL + A+A YF+M+ GV PD+ TFP ++K C L
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154
Query: 205 EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAY 264
+ + + G + ++L+ Y + G I K+F+R+ ++D V WN ML Y
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 265 VHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNL 321
G + F M ++ P+ V+ +L+ +S +DLGVQ+HG V+ GV++
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 322 SIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEA 378
SI NSL+ YSK GR D A LF +M D V+WN +IS + + E+L F +M +
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 379 GVKPDKITFVSLL 391
GV PD ITF SLL
Sbjct: 335 GVLPDAITFSSLL 347
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 217/417 (52%), Gaps = 14/417 (3%)
Query: 61 TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
K A++ V+K I + + +L C I G Q+H L+ +
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
+ + L+ +Y+ G +DA LF MS+ D WN +ISGY Q GL ++++ +++M+
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRAD--TVTWNCMISGYVQSGLMEESLTFFYEMI 332
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
GV PD TF +L + LE +++H + +R D +AL+D Y KC +
Sbjct: 333 SSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVS 392
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
A+ IF++ + D V + +M++ Y+H+GL +++++ F +V P+ +++ +IL +
Sbjct: 393 MAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG 452
Query: 301 ---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNS 357
++ LG ++HG++I++G + +I ++I Y+K GR++ A +F + +RD+VSWNS
Sbjct: 453 ILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNS 512
Query: 358 IISAHCKHRE----ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
+I+ C + A+ +F QM +G+ D ++ + LSACA L + G ++ M K
Sbjct: 513 MIT-RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-K 570
Query: 414 YKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSV 470
+ + + ++++Y + G ++ A ++ + W +++ +C HG +
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKT---MKEKNIVSWNSIIAACGNHGKL 624
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 194/371 (52%), Gaps = 11/371 (2%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G+ D + L++ C + + + + ++ + N V S L++ Y +G ++
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
LFD++ Q+D WN +++GYA+ G D I + M + + P+ TF VL VCA
Sbjct: 193 SKLFDRVLQKDCVI--WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCA 250
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
L+++G ++H V +G +G N+L+ MY KCG A K+F M R D+V+WN
Sbjct: 251 SKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNC 310
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRG 316
M++ YV GL E++ F +M+ G PD ++ S++L VS +++ QIH +++R
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFE 373
+ ++ + ++LI AY K + A+ +F+ DVV + ++IS + + ++L +F
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGC-MVNLYGR 432
+ + + P++IT VS+L L + G L+ + +K + GC ++++Y +
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRC--NIGCAVIDMYAK 488
Query: 433 AGMVEKAYSII 443
G + AY I
Sbjct: 489 CGRMNLAYEIF 499
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 158/486 (32%), Positives = 268/486 (55%), Gaps = 51/486 (10%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I G+ + + +L++C +S+A + G Q+H + + ++ V + L+ +Y G +
Sbjct: 126 ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 185
Query: 137 EDAHDLFDQMSQRDASAF-----------------------------PWNSLISGYAQLG 167
EDAH +FD+ RD ++ WN++ISGYA+ G
Sbjct: 186 EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETG 245
Query: 168 LYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLN 227
Y +A+ L+ M++ V PD T V+ CA G +E+G +VH GFG++ +N
Sbjct: 246 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVN 305
Query: 228 ALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKP 287
AL+D+Y KCG + A +F R+ +D +SWN+++ Y H L EA+ F +M+ G P
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 288 DFVSISTILTGVS---SMDLGVQIHGWVIRR--GVEWNLSIANSLIIAYSKHGRLDTARW 342
+ V++ +IL + ++D+G IH ++ +R GV S+ SLI Y+K G ++ A
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425
Query: 343 LFNLMPERDVVSWNSIISAHCKHREALA---LFEQMEEAGVKPDKITFVSLLSACAYLGL 399
+FN + + + SWN++I H A A LF +M + G++PD ITFV LLSAC++ G+
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485
Query: 400 VNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT------DGIGSEAAG 453
++ G ++ MT+ YK+ P +EH+GCM++L G +G+ ++A +I DG+
Sbjct: 486 LDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV------ 539
Query: 454 PTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMM 513
W +LL +C +HG+V +GE A L +EP+N ++ LL IY +AGR ++ + R +
Sbjct: 540 --IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRAL 597
Query: 514 LVDRGL 519
L D+G+
Sbjct: 598 LNDKGM 603
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 227/468 (48%), Gaps = 54/468 (11%)
Query: 81 IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVR---LYASFGYME 137
IR P + SLL C Q++R +H + + L SKL+ L F +
Sbjct: 31 IRNHPSL--SLLHNCKTLQSLR---IIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP 85
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
A +F + ++ + WN++ G+A A+ LY M+ G+ P+ +TFP VLK
Sbjct: 86 YAISVFKTI--QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 198 CAGLGLLEVGEEVHRHAVRAGFG-------------------------------NDGLGL 226
CA + G+++H H ++ G D +
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 227 NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCK 286
AL+ Y G+I A+K+F+ + +D VSWN+M++ Y G EA++ F M+ +
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 287 PDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWL 343
PD ++ T+++ + S++LG Q+H W+ G NL I N+LI YSK G L+TA L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 344 FNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLV 400
F +P +DV+SWN++I + ++EAL LF++M +G P+ +T +S+L ACA+LG +
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 401 NDGVRLYALMTEKYK-IKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGA 459
+ G ++ + ++ K + ++++Y + G +E A+ + + + W A
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL---SSWNA 440
Query: 460 LLYSCYLHG--SVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLE 505
+++ +HG + + + ++PD+ F L+ ++G L+
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDI-TFVGLLSACSHSGMLD 487
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 10/246 (4%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLV 127
++ KD+ ++ +R D +++ C +S +I G QVH I N+ + + L+
Sbjct: 252 ELFKDM---MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 128 RLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPD 187
LY+ G +E A LF+++ +D WN+LI GY + LY +A+ L+ +M+ G P+
Sbjct: 309 DLYSKCGELETACGLFERLPYKD--VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 366
Query: 188 LFTFPRVLKVCAGLGLLEVGEEVHRHAVR--AGFGNDGLGLNALVDMYPKCGHIVKARKI 245
T +L CA LG +++G +H + + G N +L+DMY KCG I A ++
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---M 302
FN + + SWN+M+ + HG + D F +M G +PD ++ +L+ S +
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486
Query: 303 DLGVQI 308
DLG I
Sbjct: 487 DLGRHI 492
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 266/533 (49%), Gaps = 58/533 (10%)
Query: 36 DRSNTLSFPKPKSTPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETC 95
D +++L P+ + +H E+ L ++G ++ +AS+L C
Sbjct: 103 DEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC 162
Query: 96 YRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFP 155
+ G QVH LI +V + S LV +Y+ G + DA +FD+M R+ +
Sbjct: 163 SGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS-- 220
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
WNSLI+ + Q G +A+ ++ M+E VEPD T V+ CA L ++VG+EVH V
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 216 RAG-FGNDGLGLNALVDMYPKCGHIVKARKIFN--------------------------- 247
+ ND + NA VDMY KC I +AR IF+
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 248 ----RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VS 300
+M R+ VSWN+++ Y +G EA+ FC + E P S + IL ++
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 301 SMDLGVQIH------GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
+ LG+Q H G+ + G E ++ + NSLI Y K G ++ +F M ERD VS
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 355 WNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
WN++I ++ EAL LF +M E+G KPD IT + +LSAC + G V +G ++ MT
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ-----WGALLYSCYL 466
+ + P+ +H+ CMV+L GRAG +E+A S+I + P Q WG+LL +C +
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE-------MPMQPDSVIWGSLLAACKV 573
Query: 467 HGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
H ++ +G+ A KL ++EP N + LL +Y G+ ED+ VR + G+
Sbjct: 574 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGV 626
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 219/411 (53%), Gaps = 51/411 (12%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I+ G + I L++ + ++ G QV +P ++N+ + +V G++
Sbjct: 47 IKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP----QRNIYTWNSVVTGLTKLGFL 102
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
++A LF M +RD WNS++SG+AQ ++A+ + M +EG + ++F VL
Sbjct: 103 DEADSLFRSMPERDQCT--WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C+GL + G +VH ++ F +D +ALVDMY KCG++ A+++F+ M R+ VS
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEG-CKPDFVSISTILTGVSSMD---LGVQIHGWV 312
WNS++T + +G VEA+D F QM+LE +PD V+++++++ +S+ +G ++HG V
Sbjct: 221 WNSLITCFEQNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 313 IRRG-VEWNLSIANSLIIAYSKHGRLDTARWLFNLMP----------------------- 348
++ + ++ ++N+ + Y+K R+ AR++F+ MP
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Query: 349 --------ERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYL 397
ER+VVSWN++I+ + + + EAL+LF ++ V P +F ++L ACA L
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADL 399
Query: 398 GLVNDGVRLYA-LMTEKYKIKPIMEHH----GCMVNLYGRAGMVEKAYSII 443
++ G++ + ++ +K + E ++++Y + G VE+ Y +
Sbjct: 400 AELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 139/271 (51%), Gaps = 37/271 (13%)
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----------------- 252
VH +++GF N+ N L+D Y KCG + R++F++M +R
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 253 --------------DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC---KPDFVSISTI 295
D +WNSM++ + H EA+ F M EG + F S+ +
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 296 LTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSW 355
+G++ M+ GVQ+H + + ++ I ++L+ YSK G ++ A+ +F+ M +R+VVSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 356 NSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE 412
NS+I+ ++ EAL +F+ M E+ V+PD++T S++SACA L + G ++ + +
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 413 KYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
K++ + V++Y + +++A I
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 266/464 (57%), Gaps = 29/464 (6%)
Query: 74 EASIEKGIRIDPEI----YASLLETCYRSQAIRHGSQVH------RLIPTVLLRKNVGVT 123
EA +E + + PE+ Y +LL C +A+R G +VH R +P LR
Sbjct: 38 EALLEMAM-LGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLR------ 90
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
++L+ Y +EDA + D+M +++ + W ++IS Y+Q G +A+ ++ +M+
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVS--WTAMISRYSQTGHSSEALTVFAEMMRSD 148
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+P+ FTF VL C L +G+++H V+ + + ++L+DMY K G I +AR
Sbjct: 149 GKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR 208
Query: 244 KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT---GVS 300
+IF + RD VS +++ Y GL+ EA++ F ++ EG P++V+ +++LT G++
Sbjct: 209 EIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLA 268
Query: 301 SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIIS 360
+D G Q H V+RR + + + NSLI YSK G L AR LF+ MPER +SWN+++
Sbjct: 269 LLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLV 328
Query: 361 AHCKH---REALALFEQM-EEAGVKPDKITFVSLLSACAYLGLVNDGVRLY-ALMTEKYK 415
+ KH RE L LF M +E VKPD +T +++LS C++ + + G+ ++ ++ +Y
Sbjct: 329 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYG 388
Query: 416 IKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI 475
KP EH+GC+V++ GRAG +++A+ I AG G+LL +C +H SV IGE
Sbjct: 389 TKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGV--LGSLLGACRVHLSVDIGES 446
Query: 476 AANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+L ++EP+N N+ +L +Y +AGR D+ VR M++ + +
Sbjct: 447 VGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAV 490
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 266/476 (55%), Gaps = 42/476 (8%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASF---GYMEDAH 140
D ++ S+L++C +R G VH I + + ++ + L+ +YA G
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163
Query: 141 DLFDQMSQRDASA-------------------------------FPWNSLISGYAQLGLY 169
++FD+M QR +++ +N++I+GYAQ G+Y
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223
Query: 170 DDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNAL 229
+DA+ + +M ++PD FT VL + + + G+E+H + +R G +D ++L
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283
Query: 230 VDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDF 289
VDMY K I + ++F+R++ RD +SWNS++ YV +G EA+ F QMV KP
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343
Query: 290 VSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
V+ S+++ ++++ LG Q+HG+V+R G N+ IA++L+ YSK G + AR +F+
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 347 MPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG 403
M D VSW +II H H EA++LFE+M+ GVKP+++ FV++L+AC+++GLV++
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 404 VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYS 463
+ MT+ Y + +EH+ + +L GRAG +E+AY+ I+ + E G W LL S
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISK-MCVEPTGSV-WSTLLSS 521
Query: 464 CYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
C +H ++ + E A K+F ++ +N + L+ +Y + GR ++M ++R+ + +GL
Sbjct: 522 CSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 173/357 (48%), Gaps = 46/357 (12%)
Query: 154 FPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRH 213
W S+I + L+ A+A + +M G PD FP VLK C + L GE VH
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 214 AVRAGFGNDGLGLNALVDMYPK---------CGHI---------------VKA------- 242
VR G D NAL++MY K G++ VKA
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 243 -----RKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
R++F M R+D VS+N+++ Y G+ +A+ +M KPD ++S++L
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 298 GVSS-MDL--GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
S +D+ G +IHG+VIR+G++ ++ I +SL+ Y+K R++ + +F+ + RD +S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 355 WNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
WNS+++ + ++ EAL LF QM A VKP + F S++ ACA+L ++ G +L+ +
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
I +V++Y + G ++ A I W A++ LHG
Sbjct: 371 RGGFGSNIFI-ASALVDMYSKCGNIKAARKIFDR---MNVLDEVSWTAIIMGHALHG 423
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 163/498 (32%), Positives = 256/498 (51%), Gaps = 23/498 (4%)
Query: 40 TLSFPKPKSTPLLIHQQPYPQ-----------TKHQAIEQVLKDIEASIEK-GIRIDPEI 87
TL F + K + LL +P + + L D+ SI K G+ +
Sbjct: 55 TLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETL-DLFLSIRKHGLYLHGFT 113
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
+ +L+ C R+ + + G +H L+ +V + L+ +Y+ G + DAH LFD++
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP 173
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
R S W +L SGY G + +AI L+ +MVE GV+PD + +VL C +G L+ G
Sbjct: 174 DR--SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
E + ++ + LV++Y KCG + KAR +F+ M +D V+W++M+ Y +
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIA 324
E ++ F QM+ E KPD SI L+ +S +DLG + R NL +A
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 325 NSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVK 381
N+LI Y+K G + +F M E+D+V N+ IS K+ + + A+F Q E+ G+
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 382 PDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYS 441
PD TF+ LL C + GL+ DG+R + ++ Y +K +EH+GCMV+L+GRAGM++ AY
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 442 IITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENA 501
+I D A WGALL C L + E +L LEP N N+ L IY
Sbjct: 472 LICDMPMRPNA--IVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVG 529
Query: 502 GRLEDMERVRMMLVDRGL 519
GR ++ VR M+ +G+
Sbjct: 530 GRWDEAAEVRDMMNKKGM 547
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 184/352 (52%), Gaps = 9/352 (2%)
Query: 100 AIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSL 159
+ H Q+H + L + + + L++ F + ++ LF + + F +NSL
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSH--TQFPNIFLYNSL 82
Query: 160 ISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF 219
I+G+ L+ + + L+ + + G+ FTFP VLK C ++G ++H V+ GF
Sbjct: 83 INGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGF 142
Query: 220 GNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQ 279
+D + +L+ +Y G + A K+F+ + R V+W ++ + Y G EA+D F +
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 280 MVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGR 336
MV G KPD I +L+ V +D G I ++ ++ N + +L+ Y+K G+
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 337 LDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSA 393
++ AR +F+ M E+D+V+W+++I + + +E + LF QM + +KPD+ + V LS+
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 394 CAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
CA LG ++ G +L+ ++++ + ++++Y + G + + + + +
Sbjct: 323 CASLGALDLGEWGISLI-DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 255/477 (53%), Gaps = 41/477 (8%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G R+D + +L+ + A+ G ++H + + + V + + +YAS G + A
Sbjct: 106 GGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYA 165
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
++FD+MS RD WN++I Y + GL D+A L+ +M + V PD ++ C
Sbjct: 166 RNVFDEMSHRD--VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACG 223
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDM--------------------------- 232
G + ++ + D L ALV M
Sbjct: 224 RTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTA 283
Query: 233 ----YPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD 288
Y KCG + A+ IF++ ++D V W +M++AYV EA+ F +M G KPD
Sbjct: 284 MVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPD 343
Query: 289 FVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN 345
VS+ ++++ ++ +D +H + G+E LSI N+LI Y+K G LD R +F
Sbjct: 344 VVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFE 403
Query: 346 LMPERDVVSWNSIISA---HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
MP R+VVSW+S+I+A H + +AL+LF +M++ V+P+++TFV +L C++ GLV +
Sbjct: 404 KMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEE 463
Query: 403 GVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLY 462
G +++A MT++Y I P +EH+GCMV+L+GRA ++ +A +I A+ WG+L+
Sbjct: 464 GKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIES--MPVASNVVIWGSLMS 521
Query: 463 SCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+C +HG + +G+ AA ++ +LEPD++ L+ IY R ED+ +R ++ ++ +
Sbjct: 522 ACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNV 578
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 179/389 (46%), Gaps = 53/389 (13%)
Query: 172 AIALYFQMVEE-GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALV 230
A L++Q + G D F+F +LK + + L G E+H A + D +
Sbjct: 94 ATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFM 153
Query: 231 DMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD-- 288
DMY CG I AR +F+ M RD V+WN+M+ Y GL EA F +M PD
Sbjct: 154 DMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEM 213
Query: 289 ------------------------------------FVSISTILTGVSSMDLGVQIHGWV 312
++ T+ G MD+ +
Sbjct: 214 ILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF---- 269
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REAL 369
R+ NL ++ +++ YSK GRLD A+ +F+ ++D+V W ++ISA+ + +EAL
Sbjct: 270 FRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
+FE+M +G+KPD ++ S++SACA LG+++ +++ + ++ + + ++N+
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN-GLESELSINNALINM 388
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG--SVAIGEIAANKLFDLEPDN 487
Y + G ++ + W +++ + +HG S A+ A K ++EP N
Sbjct: 389 YAKCGGLDATRDVFEK---MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP-N 444
Query: 488 EHNFALLMKIYENAGRLEDMERVRMMLVD 516
E F ++ ++G +E+ +++ + D
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 180/415 (43%), Gaps = 76/415 (18%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+++ K E + + D I +++ C R+ +R+ ++ + +R + + +
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQ------- 178
LV +YA G M+ A + F +MS R+ F +++SGY++ G DDA ++ Q
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRN--LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310
Query: 179 ------------------------MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHA 214
M G++PD+ + V+ CA LG+L+ + VH
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 215 VRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAM 274
G ++ NAL++MY KCG + R +F +M RR+ VSW+SM+ A HG +A+
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430
Query: 275 DTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKH 334
F +M E +P+ V+ +L G S L VE I S+ Y+
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSHSGL------------VEEGKKIFASMTDEYNIT 478
Query: 335 GRLDTARWLFNLMPERDVVSWNSIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSAC 394
+L+ + +L +++ REAL + E M V + + + SL+SAC
Sbjct: 479 PKLEHYGCMVDLFGRANLL------------REALEVIESMP---VASNVVIWGSLMSAC 523
Query: 395 AYLGLVNDGVRLYALMTEKYKIKPIME----HHGCMV---NLYGRAGMVEKAYSI 442
G + G K+ K I+E H G +V N+Y R E +I
Sbjct: 524 RIHGELELG---------KFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNI 569
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 242/420 (57%), Gaps = 12/420 (2%)
Query: 101 IRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLI 160
++ QVH + ++ + +KL+ L S + H LF + D F +NS+I
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDD--FLFNSVI 79
Query: 161 SGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG 220
++L L +A Y +M+ V P +TF V+K CA L L +G+ VH HAV +GFG
Sbjct: 80 KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG 139
Query: 221 NDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQM 280
D ALV Y KCG + AR++F+RM + V+WNS+++ + +GL EA+ F QM
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 281 VLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRL 337
G +PD FVS+ + ++ LG +H ++I G++ N+ + +LI YS+ G +
Sbjct: 200 RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDV 259
Query: 338 DTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQME-EAGVKPDKITFVSLLSA 393
AR +F+ M E +V +W ++ISA+ H ++A+ LF +ME + G P+ +TFV++LSA
Sbjct: 260 GKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 394 CAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII--TDGIGSEA 451
CA+ GLV +G +Y MT+ Y++ P +EHH CMV++ GRAG +++AY I D G +A
Sbjct: 320 CAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATG-KA 378
Query: 452 AGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVR 511
P W A+L +C +H + +G A +L LEPDN + +L IY +G+ +++ +R
Sbjct: 379 TAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIR 438
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E G D + SLL C ++ A+ GS VH+ I + L NV + + L+ LY+ G +
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE-GVEPDLFTFPRVLK 196
A ++FD+M + + +A W ++IS Y G A+ L+ +M ++ G P+ TF VL
Sbjct: 261 KAREVFDKMKETNVAA--WTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLS 318
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLN-ALVDMYPKCGHIVKARKIFNRMHRRDSV 255
CA GL+E G V++ ++ G+ + +VDM + G + +A K +++
Sbjct: 319 ACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKA 378
Query: 256 S----WNSMLTAYVHH 267
+ W +ML A H
Sbjct: 379 TAPALWTAMLGACKMH 394
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 276/524 (52%), Gaps = 76/524 (14%)
Query: 63 HQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGV 122
H+AI +V+ D+ +++GI ++L + ++ + G +VH I + LR NV V
Sbjct: 128 HKAI-RVMGDM---VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 123 TSKLVRLYASFGYMEDAHDLFDQMSQRDASAF---------------------------- 154
++ L+ +YA G A +FD+M RD S++
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 155 -PWNSLISGYAQLGLYDDAIALYFQMVEEGV-EPDLFTFPRVLKVCAGLGLLEVGEEVHR 212
WNS+ISG+ Q G A+ ++ +M+ + + PD FT VL CA L L +G+++H
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 213 HAVRAGFGNDGLGLNALVDMYPKCGHIVKARK---------------------------- 244
H V GF G+ LNAL+ MY +CG + AR+
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 245 -----IFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV 299
IF + RD V+W +M+ Y HG EA++ F MV G +P+ +++ +L+
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423
Query: 300 SSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDVVSW 355
SS+ G QIHG ++ G +++S++N+LI Y+K G + +A F+L+ ERD VSW
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSW 483
Query: 356 NSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE 412
S+I A +H EAL LFE M G++PD IT+V + SAC + GLVN G + + +M +
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Query: 413 KYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAI 472
KI P + H+ CMV+L+GRAG++++A I + + E T WG+LL +C +H ++ +
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFI-EKMPIEPDVVT-WGSLLSACRVHKNIDL 601
Query: 473 GEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVD 516
G++AA +L LEP+N ++ L +Y G+ E+ ++R + D
Sbjct: 602 GKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 190/410 (46%), Gaps = 76/410 (18%)
Query: 130 YASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLF 189
Y+ G M+ + FDQ+ QRD+ W ++I GY +G Y AI + MV+EG+EP F
Sbjct: 90 YSKRGDMDSTCEFFDQLPQRDS--VSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQF 147
Query: 190 TFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNR- 248
T VL A +E G++VH V+ G + N+L++MY KCG + A+ +F+R
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 249 ------------------------------MHRRDSVSWNSMLTAYVHHGLEVEAMDTFC 278
M RD V+WNSM++ + G ++ A+D F
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 279 QMVLEG-CKPDFVSISTILTGVSSMD---LGVQIHGWVIRRGVEWNLSIANSLIIAYSKH 334
+M+ + PD +++++L+ ++++ +G QIH ++ G + + + N+LI YS+
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 335 GRLDTARWL---------------------------------FNLMPERDVVSWNSII-- 359
G ++TAR L F + +RDVV+W ++I
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVG 387
Query: 360 -SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKP 418
H + EA+ LF M G +P+ T ++LS + L ++ G +++ + +I
Sbjct: 388 YEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS 447
Query: 419 IMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
+ + ++ +Y +AG + A S D I E W +++ + HG
Sbjct: 448 VSVSNA-LITMYAKAGNITSA-SRAFDLIRCE-RDTVSWTSMIIALAQHG 494
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 169/369 (45%), Gaps = 88/369 (23%)
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
VH +++G +N L+++Y K G+ + ARK+F+ M R + SWN++L+AY G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRG- 94
Query: 270 EVEAMDTFCQ-----------------------------------MVLEGCKPDFVSIST 294
MD+ C+ MV EG +P +++
Sbjct: 95 ---DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 295 ILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERD 351
+L V++ M+ G ++H ++++ G+ N+S++NSL+ Y+K G A+++F+ M RD
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 352 VVSWNSIISAHCKHRE---ALALFEQMEEAGV---------------------------- 380
+ SWN++I+ H + + A+A FEQM E +
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 381 ----KPDKITFVSLLSACAYLGLVNDGVRLYA-LMTEKYKIKPIMEHHGCMVNLYGRAGM 435
PD+ T S+LSACA L + G ++++ ++T + I I+ + ++++Y R G
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN--ALISMYSRCGG 329
Query: 436 VEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI--AANKLFDLEPDNEHNFAL 493
VE A +I E G ++ L G + +G++ A N L+ + +
Sbjct: 330 VETARRLI------EQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 494 LMKIYENAG 502
++ YE G
Sbjct: 384 MIVGYEQHG 392
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVG 121
+H + + + + + G R + A++L ++ HG Q+H +V
Sbjct: 390 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS 449
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQM-SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
V++ L+ +YA G + A FD + +RD W S+I AQ G ++A+ L+ M+
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERD--TVSWTSMIIALAQHGHAEEALELFETML 507
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNA-LVDMYPKCGHI 239
EG+ PD T+ V C GL+ G + L A +VD++ + G +
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 240 VKARKIFNRMH-RRDSVSWNSMLTA-YVHHGLEV 271
+A++ +M D V+W S+L+A VH +++
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 255/456 (55%), Gaps = 10/456 (2%)
Query: 70 LKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRL 129
L+ +++ E+ ++ S+L + I G ++H V +++ LV +
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 130 YASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLF 189
YA G +E A LFD M +R+ + WNS+I Y Q +A+ ++ +M++EGV+P
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVS--WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 190 TFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM 249
+ L CA LG LE G +H+ +V G + +N+L+ MY KC + A +F ++
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 250 HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GV 306
R VSWN+M+ + +G ++A++ F QM KPD + +++T ++ + +
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH- 365
IHG V+R ++ N+ + +L+ Y+K G + AR +F++M ER V +WN++I + H
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 366 --REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH 423
+ AL LFE+M++ +KP+ +TF+S++SAC++ GLV G++ + +M E Y I+ M+H+
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578
Query: 424 GCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDL 483
G MV+L GRAG + +A+ I A +GA+L +C +H +V E AA +LF+L
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV--YGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 484 EPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
PD+ LL IY A E + +VR+ ++ +GL
Sbjct: 637 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 209/366 (57%), Gaps = 17/366 (4%)
Query: 53 IHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIP 112
+ Q P P ++H+ I A++ + P A LLE C + +R Q+ L+
Sbjct: 11 VPQIPNPPSRHRHFLSERNYIPANVYE----HPA--ALLLERCSSLKELR---QILPLVF 61
Query: 113 TVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDA 172
L + +KLV L+ +G +++A +F+ + + +++++ G+A++ D A
Sbjct: 62 KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK--LNVLYHTMLKGFAKVSDLDKA 119
Query: 173 IALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDM 232
+ + +M + VEP ++ F +LKVC L VG+E+H V++GF D + L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 233 YPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
Y KC + +ARK+F+RM RD VSWN+++ Y +G+ A++ M E KP F++I
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 293 STILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE 349
++L VS++ L G +IHG+ +R G + ++I+ +L+ Y+K G L+TAR LF+ M E
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 350 RDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
R+VVSWNS+I A+ ++ +EA+ +F++M + GVKP ++ + L ACA LG + G +
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 407 YALMTE 412
+ L E
Sbjct: 360 HKLSVE 365
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 255/453 (56%), Gaps = 14/453 (3%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ + + +D S+L C + + G VH+L+ L + V + LV +Y G M
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
++A +FD+M +RD W +I+GY + G ++A+ L M EGV P+ T ++
Sbjct: 270 DEARFVFDRMERRDV--ITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS 327
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
VC + G+ +H AVR +D + +L+ MY KC + ++F+ + +
Sbjct: 328 VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP 387
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM-DL--GVQIHGWVI 313
W++++ V + L +A+ F +M E +P+ +++++L +++ DL + IH ++
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---R 366
+ G +L A L+ YSK G L++A +FN + E+ DVV W ++IS + H
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCM 426
AL +F +M +GV P++ITF S L+AC++ GLV +G+ L+ M E YK H+ C+
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCI 567
Query: 427 VNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD 486
V+L GRAG +++AY++IT I E T WGALL +C H +V +GE+AANKLF+LEP+
Sbjct: 568 VDLLGRAGRLDEAYNLITT-IPFEPT-STVWGALLAACVTHENVQLGEMAANKLFELEPE 625
Query: 487 NEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
N N+ LL IY GR +DME+VR M+ + GL
Sbjct: 626 NTGNYVLLANIYAALGRWKDMEKVRSMMENVGL 658
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 217/418 (51%), Gaps = 22/418 (5%)
Query: 63 HQAIEQVLKDIEASIEKGIRIDPE--IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
H AI ++ + +G++ P+ Y + + ++++ G VH I ++
Sbjct: 97 HDAISVFIR----MVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDK 152
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
V + L+ +Y +FG +E A D+FD M RD WN++ISGY + G +DA+ ++ MV
Sbjct: 153 YVQNALLAMYMNFGKVEMARDVFDVMKNRDV--ISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
E V+ D T +L VC L LE+G VH+ G+ NALV+MY KCG +
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQ-MVLEGCKPDFVSISTILTGV 299
+AR +F+RM RRD ++W M+ Y G +VE C+ M EG +P+ V+I+++++
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDG-DVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 300 S---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWN 356
++ G +HGW +R+ V ++ I SLI Y+K R+D +F+ + W+
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389
Query: 357 SIISAHCKHRE----ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE 412
+II A C E AL LF++M V+P+ T SLL A A L + + ++ +T+
Sbjct: 390 AII-AGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 413 KYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGS--EAAGPTQWGALLYSCYLHG 468
+ + G +V++Y + G +E A+ I +GI ++ WGAL+ +HG
Sbjct: 449 TGFMSSLDAATG-LVHVYSKCGTLESAHKIF-NGIQEKHKSKDVVLWGALISGYGMHG 504
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 210/409 (51%), Gaps = 17/409 (4%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
Y SLL +Q+I +H + T R + + S L YA G++ A LF++M
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE--PDLFTFPRVLKVCAGLGLLE 205
Q +S +N +I Y + GLY DAI+++ +MV EGV+ PD +T+P V K L ++
Sbjct: 77 Q--SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 206 VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
+G VH +R+ FG D NAL+ MY G + AR +F+ M RD +SWN+M++ Y
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILT---GVSSMDLGVQIHGWVIRRGVEWNLS 322
+G +A+ F MV E D +I ++L + +++G +H V + + +
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAG 379
+ N+L+ Y K GR+D AR++F+ M RDV++W +I+ + + AL L M+ G
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
V+P+ +T SL+S C VNDG L+ + I+ ++++Y + V+
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETS-LISMYAKCKRVDLC 373
Query: 440 YSIITDGIGSEAAGPTQWGALLYSCYLHGSV--AIGEIAANKLFDLEPD 486
+ + + G GP W A++ C + V A+G + D+EP+
Sbjct: 374 FRVFS-GASKYHTGP--WSAIIAGCVQNELVSDALGLFKRMRREDVEPN 419
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 20/311 (6%)
Query: 72 DIEASIE-------KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTS 124
D+E ++E +G+R + ASL+ C + + G +H + ++ + +
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIET 358
Query: 125 KLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGV 184
L+ +YA ++ +F S+ PW+++I+G Q L DA+ L+ +M E V
Sbjct: 359 SLISMYAKCKRVDLCFRVFSGASKYHTG--PWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 185 EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARK 244
EP++ T +L A L L +H + + GF + LV +Y KCG + A K
Sbjct: 417 EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 245 IFNRMHR----RDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
IFN + +D V W ++++ Y HG A+ F +MV G P+ ++ ++ L S
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS 536
Query: 301 SMDLGVQIHGWVIRRGVEWNLSIANS-----LIIAYSKHGRLDTARWLFNLMP-ERDVVS 354
L V+ + R +E ++A S ++ + GRLD A L +P E
Sbjct: 537 HSGL-VEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTV 595
Query: 355 WNSIISAHCKH 365
W ++++A H
Sbjct: 596 WGALLAACVTH 606
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/444 (34%), Positives = 244/444 (54%), Gaps = 46/444 (10%)
Query: 116 LRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIAL 175
L ++ + +K+V M+ A LF+Q+S + + F +NS+I Y LY D I +
Sbjct: 38 LSQSSFMVTKMVDFCDKIEDMDYATRLFNQVS--NPNVFLYNSIIRAYTHNSLYCDVIRI 95
Query: 176 YFQMVEEGVE-PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYP 234
Y Q++ + E PD FTFP + K CA LG +G++VH H + G + NAL+DMY
Sbjct: 96 YKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYM 155
Query: 235 KCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG-------------------------- 268
K +V A K+F+ M+ RD +SWNS+L+ Y G
Sbjct: 156 KFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISG 215
Query: 269 -----LEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWN 320
VEAMD F +M L G +PD +S+ ++L + S++LG IH + RRG
Sbjct: 216 YTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQ 275
Query: 321 LSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHREA---LALFEQMEE 377
+ N+LI YSK G + A LF M +DV+SW+++IS + H A + F +M+
Sbjct: 276 TGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR 335
Query: 378 AGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVE 437
A VKP+ ITF+ LLSAC+++G+ +G+R + +M + Y+I+P +EH+GC++++ RAG +E
Sbjct: 336 AKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLE 395
Query: 438 KAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLM 495
+A I + P WG+LL SC G++ + +A + L +LEP++ N+ LL
Sbjct: 396 RAVEITK----TMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLA 451
Query: 496 KIYENAGRLEDMERVRMMLVDRGL 519
IY + G+ ED+ R+R M+ + +
Sbjct: 452 NIYADLGKWEDVSRLRKMIRNENM 475
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 181/376 (48%), Gaps = 45/376 (11%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
D + + ++C + G QVH + R +V + L+ +Y F + DAH +F
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167
Query: 144 DQMSQRDASAFPWNSLISGYAQL-------------------------------GLYDDA 172
D+M +RD WNSL+SGYA+L G Y +A
Sbjct: 168 DEMYERD--VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEA 225
Query: 173 IALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDM 232
+ + +M G+EPD + VL CA LG LE+G+ +H +A R GF NAL++M
Sbjct: 226 MDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEM 285
Query: 233 YPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
Y KCG I +A ++F +M +D +SW++M++ Y +HG A++TF +M KP+ ++
Sbjct: 286 YSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITF 345
Query: 293 STILTGVSSMDL---GVQIHGWVIRRG--VEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
+L+ S + + G++ ++R+ +E + LI ++ G+L+ A + M
Sbjct: 346 LGLLSACSHVGMWQEGLRYFD-MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 404
Query: 348 PER-DVVSWNSIISAHCKHREAL--ALFEQMEEAGVKPDKI-TFVSLLSACAYLGLVNDG 403
P + D W S++S+ C+ L AL ++P+ + +V L + A LG D
Sbjct: 405 PMKPDSKIWGSLLSS-CRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDV 463
Query: 404 VRLYALM-TEKYKIKP 418
RL ++ E K P
Sbjct: 464 SRLRKMIRNENMKKTP 479
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 139/305 (45%), Gaps = 52/305 (17%)
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
++++ + G + +VD K + A ++FN++ + +NS++ AY H+
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 268 GLEVEAMDTFCQMVLEGCK-PDFVSISTILTGVSSMD---LGVQIHGWVIRRGVEWNLSI 323
L + + + Q++ + + PD + + +S+ LG Q+HG + + G +++
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 324 ANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK------------------- 364
N+LI Y K L A +F+ M ERDV+SWNS++S + +
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 365 ---------------HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG--VRLY 407
+ EA+ F +M+ AG++PD+I+ +S+L +CA LG + G + LY
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 408 ALMTEKYKIKPIMEHHG---CMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSC 464
A + + ++ G ++ +Y + G++ +A + G + W ++
Sbjct: 267 A------ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV---ISWSTMISGY 317
Query: 465 YLHGS 469
HG+
Sbjct: 318 AYHGN 322
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 247/446 (55%), Gaps = 10/446 (2%)
Query: 81 IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
++ + Y S+L++C ++ G Q+H + N+ V S L+ LYA G ME+A
Sbjct: 109 VKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEAR 168
Query: 141 DLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAG 200
FD M +RD WN++I GY D + +L+ M+ EG +PD FTF +L+
Sbjct: 169 LQFDSMKERDL--VSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIV 226
Query: 201 LGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSM 260
+ LE+ E+H A++ GFG + +LV+ Y KCG + A K+ +RD +S ++
Sbjct: 227 VKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTAL 286
Query: 261 LTAYVH-HGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRG 316
+T + + +A D F M+ K D V +S++L T ++S+ +G QIHG+ ++
Sbjct: 287 ITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSS 346
Query: 317 -VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
+ +++++ NSLI Y+K G ++ A F M E+DV SW S+I+ + +H +A+ L+
Sbjct: 347 QIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLY 406
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
+ME +KP+ +TF+SLLSAC++ G G ++Y M K+ I+ EH C++++ R
Sbjct: 407 NRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLAR 466
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFA 492
+G +E+AY++I G + + WGA L +C HG+V + ++AA +L +EP N+
Sbjct: 467 SGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYI 526
Query: 493 LLMKIYENAGRLEDMERVRMMLVDRG 518
L +Y G ++ R ++ + G
Sbjct: 527 NLASVYAANGAWDNALNTRKLMKESG 552
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 181/364 (49%), Gaps = 9/364 (2%)
Query: 83 IDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
+ P +Y L+ C + +H T N+ + L+ LY G ++ A L
Sbjct: 10 LSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKL 69
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
FD++S+RD W ++IS +++ G + DA+ L+ +M E V+ + FT+ VLK C LG
Sbjct: 70 FDRISKRDV--VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLG 127
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
L+ G ++H + + + +AL+ +Y +CG + +AR F+ M RD VSWN+M+
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMID 187
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEW 319
Y + + F M+ EG KPD + ++L V +++ ++HG I+ G
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR 247
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR----EALALFEQM 375
+ ++ SL+ AY K G L A L +RD++S ++I+ + +A +F+ M
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGM 435
K D++ S+L C + V G +++ + +I+ + ++++Y ++G
Sbjct: 308 IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGE 367
Query: 436 VEKA 439
+E A
Sbjct: 368 IEDA 371
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 251/453 (55%), Gaps = 13/453 (2%)
Query: 76 SIEKGIR-IDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFG 134
++ G+R +D SLL C + G +H L + V++KL+ LYA FG
Sbjct: 237 TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 135 YMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRV 194
+ D +FD+M RD WNS+I Y AI+L+ +M ++PD T +
Sbjct: 297 RLRDCQKVFDRMYVRDL--ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRD 253
+ + LG + V +R G+ + + + NA+V MY K G + AR +FN + D
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG----CKPDFVSISTILTGVSSMDLGVQIH 309
+SWN++++ Y +G EA++ + M EG + +VS+ + ++ G+++H
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---R 366
G +++ G+ ++ + SL Y K GRL+ A LF +P + V WN++I+ H H
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCM 426
+A+ LF++M + GVKPD ITFV+LLSAC++ GLV++G + +M Y I P ++H+GCM
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 594
Query: 427 VNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD 486
V++YGRAG +E A I S + WGALL +C +HG+V +G+IA+ LF++EP+
Sbjct: 595 VDMYGRAGQLETALKFIKS--MSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPE 652
Query: 487 NEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ LL +Y +AG+ E ++ +R + +GL
Sbjct: 653 HVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGL 685
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 236/457 (51%), Gaps = 31/457 (6%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ G+ D + S+L+ C + + G+++H L +V V + L+ LY+ + +
Sbjct: 145 LSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP-DLFTFPRVL 195
+A LFD+M RD + WN++ISGY Q G +A+ L G+ D T +L
Sbjct: 202 GNARILFDEMPVRDMGS--WNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLL 254
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
C G G +H ++++ G ++ N L+D+Y + G + +K+F+RM+ RD +
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWV 312
SWNS++ AY + + A+ F +M L +PD +S+++IL+ + + + G+
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT 374
Query: 313 IRRGVEW---NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---R 366
+R+G W +++I N++++ Y+K G +D+AR +FN +P DV+SWN+IIS + ++
Sbjct: 375 LRKG--WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFAS 432
Query: 367 EALALFEQMEEAG-VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGC 425
EA+ ++ MEE G + ++ T+VS+L AC+ G + G++L+ + + +
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS- 491
Query: 426 MVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFD--L 483
+ ++YG+ G +E A S+ W L+ HG + ++ D +
Sbjct: 492 LADMYGKCGRLEDALSLFYQ---IPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 484 EPDNEHNFALLMKIYENAGRLEDMERV-RMMLVDRGL 519
+PD+ F L+ ++G +++ + MM D G+
Sbjct: 549 KPDHI-TFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 584
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 10/331 (3%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALY- 176
+NV +++KLV LY G + A FD + RD + WN +ISGY + G + I +
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDV--YAWNLMISGYGRAGNSSEVIRCFS 141
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
M+ G+ PD TFP VLK C + G ++H A++ GF D +L+ +Y +
Sbjct: 142 LFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRY 198
Query: 237 GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
+ AR +F+ M RD SWN+M++ Y G EA+ T + VS+ +
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-TLSNGLRAMDSVTVVSLLSAC 257
Query: 297 TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWN 356
T + GV IH + I+ G+E L ++N LI Y++ GRL + +F+ M RD++SWN
Sbjct: 258 TEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWN 317
Query: 357 SIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
SII A+ + + A++LF++M + ++PD +T +SL S + LG + + K
Sbjct: 318 SIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK 377
Query: 414 YKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
+ +V +Y + G+V+ A ++
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/536 (28%), Positives = 262/536 (48%), Gaps = 76/536 (14%)
Query: 58 YPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLR 117
Y TK + Q + G+ D + +L + C A + G Q+H + L
Sbjct: 89 YALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLD 148
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD--------------------------- 150
+ V + +Y G M DA +FD+MS +D
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 151 ------ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLL 204
A+ WN ++SG+ + G + +A+ ++ ++ G PD T VL +L
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 205 EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS---------- 254
+G +H + ++ G D ++A++DMY K GH+ +FN+ ++
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 255 -------------------------VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDF 289
VSW S++ +G ++EA++ F +M + G KP+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 290 VSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
V+I ++L ++++ G HG+ +R + N+ + ++LI Y+K GR++ ++ +FN+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 347 MPERDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG 403
MP +++V WNS++ S H K +E +++FE + +KPD I+F SLLSAC +GL ++G
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 404 VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYS 463
+ + +M+E+Y IKP +EH+ CMVNL GRAG +++AY +I + WGALL S
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE--MPFEPDSCVWGALLNS 566
Query: 464 CYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
C L +V + EIAA KLF LEP+N + LL IY G +++ +R + GL
Sbjct: 567 CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGL 622
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 196/445 (44%), Gaps = 92/445 (20%)
Query: 105 SQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYA 164
+Q H I + + +++KL+ Y+++ DA DL Q S D + + ++SLI
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDA-DLVLQ-SIPDPTIYSFSSLIYALT 92
Query: 165 QLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGL 224
+ L+ +I ++ +M G+ PD P + KVCA L +VG+++H + +G D
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 225 GLNALVDMYPKCGHIVKARKIFNRMHRRDS------------------------------ 254
++ MY +CG + ARK+F+RM +D
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 255 -----VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGV 306
VSWN +L+ + G EA+ F ++ G PD V++S++L V +++G
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 307 QIHGWVIRRGV-------------------------------EWNLSIANSLIIAYSKHG 335
IHG+VI++G+ + N+ I S++G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 336 RLDTARWLFNLMPER----DVVSWNSIISA---HCKHREALALFEQMEEAGVKPDKITFV 388
+D A +F L E+ +VVSW SII+ + K EAL LF +M+ AGVKP+ +T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 389 SLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHG-CMVNLYGRAGMVEKAYSIITDGI 447
S+L AC + + G + + + + H G ++++Y + G + + +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNV--HVGSALIDMYAKCGRINLSQIVFN--- 447
Query: 448 GSEAAGPTQ----WGALLYSCYLHG 468
PT+ W +L+ +HG
Sbjct: 448 ----MMPTKNLVCWNSLMNGFSMHG 468
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 269/501 (53%), Gaps = 46/501 (9%)
Query: 61 TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
K++ E+V+ + + KGIR D Y S+L+ C + + G VH I + ++
Sbjct: 120 AKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSL 179
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
V + L+ +Y F M A LFD+M +RDA + WN++I+ YA G++ +A L+ +M
Sbjct: 180 YVCNALISMYKRFRNMGIARRLFDRMFERDAVS--WNAVINCYASEGMWSEAFELFDKMW 237
Query: 181 EEGVEPDLFT--------------------------FPRVL---------KVCAGLGLLE 205
GVE + T FP L K C+ +G +
Sbjct: 238 FSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIR 297
Query: 206 VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
+G+E+H A+ + + N L+ MY KC + A +F + +WNS+++ Y
Sbjct: 298 LGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYA 357
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRGVEWNLS 322
EA +M++ G +P+ +++++IL ++++ G + H +++RR + +
Sbjct: 358 QLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYT 417
Query: 323 IA-NSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEA 378
+ NSL+ Y+K G++ A+ + +LM +RD V++ S+I + E ALALF++M +
Sbjct: 418 MLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRS 477
Query: 379 GVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEK 438
G+KPD +T V++LSAC++ LV++G RL+ M +Y I+P ++H CMV+LYGRAG + K
Sbjct: 478 GIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAK 537
Query: 439 AYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIY 498
A II + + + +G T W LL +C++HG+ IG+ AA KL +++P+N + L+ +Y
Sbjct: 538 AKDIIHN-MPYKPSGAT-WATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMY 595
Query: 499 ENAGRLEDMERVRMMLVDRGL 519
AG + VR ++ D G+
Sbjct: 596 AAAGSWSKLAEVRTIMRDLGV 616
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 187/420 (44%), Gaps = 57/420 (13%)
Query: 89 ASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQ 148
ASLL C +A G QVH + + + + KLV Y++F +A + + +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIE--NS 104
Query: 149 RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
PWN LI+ YA+ L+++ IA Y +MV +G+ PD FT+P VLK C + G
Sbjct: 105 DILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGR 164
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG 268
VH + + + NAL+ MY + ++ AR++F+RM RD+VSWN+++ Y G
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEG 224
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTG------------------------------ 298
+ EA + F +M G + ++ + I G
Sbjct: 225 MWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
Query: 299 --------VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER 350
+ ++ LG +IHG I + ++ N+LI YSK L A +F E
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN 344
Query: 351 DVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY 407
+ +WNSIIS + K EA L +M AG +P+ IT S+L CA + + G +
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 408 ALMTEKYKIKPIMEHHGCMVNLYGRAGMV--------------EKAYSIITDGIGSEAAG 453
+ + K +V++Y ++G + E Y+ + DG G++ G
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEG 464
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 267 HGLEVEAMDTFCQMVLEGCKP---DFV--SISTILTG---VSSMDLGVQIHGWVIRRGVE 318
HG +A TF + L+ D V S +++L+ V + GVQ+H I GVE
Sbjct: 16 HGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVE 75
Query: 319 WNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV---VSWNSIISAHCKH---REALALF 372
++ + L+ YS + A+ +++ D+ + WN +I+++ K+ E +A +
Sbjct: 76 YHSVLVPKLVTFYSAFNLHNEAQ---SIIENSDILHPLPWNVLIASYAKNELFEEVIAAY 132
Query: 373 EQMEEAGVKPDKITFVSLLSACA 395
++M G++PD T+ S+L AC
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACG 155
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 243/445 (54%), Gaps = 43/445 (9%)
Query: 81 IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
+R D + +L+ C S I G ++H V L + V + LV +Y G++ +A
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 141 DLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAG 200
+ D+MS+RD + WNSL+ GYAQ +DDA+ + +M + D T +L +
Sbjct: 196 LVLDEMSRRDVVS--WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN 253
Query: 201 LGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSM 260
V MY K +F +M ++ VSWN M
Sbjct: 254 TTTENV-------------------------MYVK--------DMFFKMGKKSLVSWNVM 280
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGV 317
+ Y+ + + VEA++ + +M +G +PD VSI+++L S++ LG +IHG++ R+ +
Sbjct: 281 IGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL 340
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQ 374
NL + N+LI Y+K G L+ AR +F M RDVVSW ++ISA+ + +A+ALF +
Sbjct: 341 IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSK 400
Query: 375 MEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAG 434
++++G+ PD I FV+ L+AC++ GL+ +G + LMT+ YKI P +EH CMV+L GRAG
Sbjct: 401 LQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAG 460
Query: 435 MVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALL 494
V++AY I D S WGALL +C +H IG +AA+KLF L P+ + LL
Sbjct: 461 KVKEAYRFIQD--MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLL 518
Query: 495 MKIYENAGRLEDMERVRMMLVDRGL 519
IY AGR E++ +R ++ +GL
Sbjct: 519 SNIYAKAGRWEEVTNIRNIMKSKGL 543
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 263/461 (57%), Gaps = 19/461 (4%)
Query: 70 LKDIEASIEK---GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
+K +E +E G+ + +S ++ C +R G H ++ T N ++S L
Sbjct: 145 VKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTL 204
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE-EGVE 185
LY DA +FD+M + D W +++S +++ LY++A+ L++ M +G+
Sbjct: 205 AYLYGVNREPVDARRVFDEMPEPDV--ICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLV 262
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
PD TF VL C L L+ G+E+H + G G++ + ++L+DMY KCG + +AR++
Sbjct: 263 PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQV 322
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSM 302
FN M +++SVSW+++L Y +G +A++ F +M + D T+L G++++
Sbjct: 323 FNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAV 378
Query: 303 DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA- 361
LG +IHG +RRG N+ + ++LI Y K G +D+A +++ M R++++WN+++SA
Sbjct: 379 RLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSAL 438
Query: 362 --HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
+ + EA++ F M + G+KPD I+F+++L+AC + G+V++G + LM + Y IKP
Sbjct: 439 AQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPG 498
Query: 420 MEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVA-IGEIAAN 478
EH+ CM++L GRAG+ E+A +++ A + WG LL C + + + E A
Sbjct: 499 TEHYSCMIDLLGRAGLFEEAENLLERAECRNDA--SLWGVLLGPCAANADASRVAERIAK 556
Query: 479 KLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
++ +LEP ++ LL +Y+ GR D +R ++V RG+
Sbjct: 557 RMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 236/511 (46%), Gaps = 57/511 (11%)
Query: 49 TPLLIHQQPYPQT------KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIR 102
TP + P Q+ K + + ++ + ++ I P++YASLL+TC + +
Sbjct: 19 TPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFI 78
Query: 103 HGSQVHRLIPTVLLRKNVGVTSKLVRLYASFG-YMEDAHDLFDQMSQRDASAFPWNSLIS 161
HG Q H + L + V + L+ LY G M + +FD +DA W S++S
Sbjct: 79 HGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDA--ISWTSMMS 136
Query: 162 GYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGN 221
GY + A+ ++ +MV G++ + FT +K C+ LG + +G H + GF
Sbjct: 137 GYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEW 196
Query: 222 DGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMV 281
+ + L +Y V AR++F+ M D + W ++L+A+ + L EA+ F M
Sbjct: 197 NHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH 256
Query: 282 L-EGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRL 337
+G PD + T+LT + + G +IHG +I G+ N+ + +SL+ Y K G +
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 338 DTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSAC 394
AR +FN M +++ VSW++++ +C+ H +A+ +F +MEE D F ++L AC
Sbjct: 317 REARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKAC 372
Query: 395 AYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT---------- 444
A L V G ++ + ++ +++LYG++G ++ A + +
Sbjct: 373 AGLAAVRLGKEIHGQYVRRGCFGNVIVESA-LIDLYGKSGCIDSASRVYSKMSIRNMITW 431
Query: 445 ---------DGIGSEAAG-------------PTQWGALLYSCYLHGSVAIGE---IAANK 479
+G G EA + A+L +C G V G + K
Sbjct: 432 NAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491
Query: 480 LFDLEPDNEHNFALLMKIYENAGRLEDMERV 510
+ ++P EH ++ ++ + AG E+ E +
Sbjct: 492 SYGIKPGTEH-YSCMIDLLGRAGLFEEAENL 521
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 251/451 (55%), Gaps = 17/451 (3%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+++G+R D SLL + G QVH L ++ V S L LY+ G +
Sbjct: 445 LQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSL 501
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
E+++ LF + +D + W S+ISG+ + G +AI L+ +M+++G PD T VL
Sbjct: 502 EESYKLFQGIPFKDNAC--WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLT 559
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDSV 255
VC+ L G+E+H + +RAG + G+ L +ALV+MY KCG + AR++++R+ D V
Sbjct: 560 VCSSHPSLPRGKEIHGYTLRAGI-DKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPV 618
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWV 312
S +S+++ Y HGL + F MV+ G D +IS+IL + D LG Q+H ++
Sbjct: 619 SCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYI 678
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REAL 369
+ G+ S+ +SL+ YSK G +D F+ + D+++W ++I+++ +H EAL
Sbjct: 679 TKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEAL 738
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
++ M+E G KPDK+TFV +LSAC++ GLV + M + Y I+P H+ CMV+
Sbjct: 739 QVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDA 798
Query: 430 YGRAGMVEKAYSIITD-GIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNE 488
GR+G + +A S I + I +A WG LL +C +HG V +G++AA K +LEP +
Sbjct: 799 LGRSGRLREAESFINNMHIKPDA---LVWGTLLAACKIHGEVELGKVAAKKAIELEPSDA 855
Query: 489 HNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ L I G +++E R ++ G+
Sbjct: 856 GAYISLSNILAEVGEWDEVEETRKLMKGTGV 886
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 190/366 (51%), Gaps = 14/366 (3%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
D Y+S+L C + +R G V R+I ++V V + +V LYA G+M +A ++
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCG--AEDVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
F ++ + S W ++SGY + A+ ++ +M GVE + T V+ C
Sbjct: 308 FSRIP--NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF---NRMHRRDSVSWNS 259
++ +VH ++GF D AL+ MY K G I + ++F + + R++ V N
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NV 423
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEW 319
M+T++ +A+ F +M+ EG + D S+ ++L+ + ++LG Q+HG+ ++ G+
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVL 483
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQME 376
+L++ +SL YSK G L+ + LF +P +D W S+IS ++ REA+ LF +M
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML 543
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
+ G PD+ T ++L+ C+ + G ++ T + I M+ +VN+Y + G +
Sbjct: 544 DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHG-YTLRAGIDKGMDLGSALVNMYSKCGSL 602
Query: 437 EKAYSI 442
+ A +
Sbjct: 603 KLARQV 608
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 199/423 (47%), Gaps = 44/423 (10%)
Query: 42 SFPKPKSTPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQA- 100
+ P+P I Y Q H+ E+ L+ G + Y S++ C QA
Sbjct: 109 TIPQPDVVSCNIMISGYKQ--HRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAP 166
Query: 101 ----------IRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF-DQMSQR 149
I+ G + ++ + L + V SK +R EDA+ +F D +S
Sbjct: 167 LFSELVCCHTIKMGYFFYEVVESAL----IDVFSKNLRF-------EDAYKVFRDSLS-- 213
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
A+ + WN++I+G + Y L+ +M +PD +T+ VL CA L L G+
Sbjct: 214 -ANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKV 272
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
V ++ G D A+VD+Y KCGH+ +A ++F+R+ VSW ML+ Y
Sbjct: 273 VQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSND 331
Query: 270 EVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANS 326
A++ F +M G + + +++++++ + Q+H WV + G + S+A +
Sbjct: 332 AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAA 391
Query: 327 LIIAYSKHGRLDTARWLFNLMPE---RDVVSWNSIISAHCKHR---EALALFEQMEEAGV 380
LI YSK G +D + +F + + +++V N +I++ + + +A+ LF +M + G+
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGL 449
Query: 381 KPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAY 440
+ D+ + SLLS L +N G +++ T K + + + LY + G +E++Y
Sbjct: 450 RTDEFSVCSLLSV---LDCLNLGKQVHG-YTLKSGLVLDLTVGSSLFTLYSKCGSLEESY 505
Query: 441 SII 443
+
Sbjct: 506 KLF 508
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 10/264 (3%)
Query: 46 PKSTPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGS 105
P+ P+ ++H I+ + G +D +S+L+ S G+
Sbjct: 613 PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGA 672
Query: 106 QVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQ 165
QVH I + L V S L+ +Y+ FG ++D F Q++ D A W +LI+ YAQ
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIA--WTALIASYAQ 730
Query: 166 LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG 225
G ++A+ +Y M E+G +PD TF VL C+ GL+E H +++ +G +
Sbjct: 731 HGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVE-ESYFHLNSMVKDYGIEPEN 789
Query: 226 LN--ALVDMYPKCGHIVKARKIFNRMH-RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVL 282
+ +VD + G + +A N MH + D++ W ++L A HG EVE + +
Sbjct: 790 RHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHG-EVELGKVAAKKAI 848
Query: 283 EGCKPD---FVSISTILTGVSSMD 303
E D ++S+S IL V D
Sbjct: 849 ELEPSDAGAYISLSNILAEVGEWD 872
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%), Gaps = 8/141 (5%)
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALA 370
R + +++ + SL+ YS G + A LF+ +P+ DVVS N +IS + +HR E+L
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 371 LFEQMEEAGVKPDKITFVSLLSACAYLG--LVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
F +M G + ++I++ S++SAC+ L L ++ V + + Y ++E +++
Sbjct: 137 FFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKM-GYFFYEVVE--SALID 193
Query: 429 LYGRAGMVEKAYSIITDGIGS 449
++ + E AY + D + +
Sbjct: 194 VFSKNLRFEDAYKVFRDSLSA 214
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 236/397 (59%), Gaps = 21/397 (5%)
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRV 194
M AH +F ++ ++ + F WN+LI GYA++G A +LY +M G VEPD T+P +
Sbjct: 69 MSYAHKVFSKI-EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFL 127
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
+K + + +GE +H +R+GFG+ N+L+ +Y CG + A K+F++M +D
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGW 311
V+WNS++ + +G EA+ + +M +G KPD +I ++L+ + ++ LG ++H +
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHREA 368
+I+ G+ NL +N L+ Y++ GR++ A+ LF+ M +++ VSW S+I + + +EA
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 369 LALFEQMEEA-GVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
+ LF+ ME G+ P +ITFV +L AC++ G+V +G + M E+YKI+P +EH GCMV
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQ-----WGALLYSCYLHGSVAIGEIAANKLFD 482
+L RAG V+KAY I + P Q W LL +C +HG + E A ++
Sbjct: 368 DLLARAGQVKKAYEYIK-------SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ 420
Query: 483 LEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
LEP++ ++ LL +Y + R D++++R ++ G+
Sbjct: 421 LEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV 457
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 163/311 (52%), Gaps = 17/311 (5%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVG----VTSKLVRLYASFGYMEDA 139
D Y L++ +R G +H +V++R G V + L+ LYA+ G + A
Sbjct: 120 DTHTYPFLIKAVTTMADVRLGETIH----SVVIRSGFGSLIYVQNSLLHLYANCGDVASA 175
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+ +FD+M ++D A WNS+I+G+A+ G ++A+ALY +M +G++PD FT +L CA
Sbjct: 176 YKVFDKMPEKDLVA--WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 233
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
+G L +G+ VH + ++ G + N L+D+Y +CG + +A+ +F+ M ++SVSW S
Sbjct: 234 KIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTS 293
Query: 260 MLTAYVHHGLEVEAMDTFCQM-VLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVE 318
++ +G EA++ F M EG P ++ IL S + + + R E
Sbjct: 294 LIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 353
Query: 319 WNLSIA----NSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISAHCKHREA-LALF 372
+ + ++ ++ G++ A MP + +VV W +++ A H ++ LA F
Sbjct: 354 YKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEF 413
Query: 373 EQMEEAGVKPD 383
+++ ++P+
Sbjct: 414 ARIQILQLEPN 424
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
KGI+ D SLL C + A+ G +VH + V L +N+ ++ L+ LYA G +E+
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM-VEEGVEPDLFTFPRVLKV 197
A LFD+M D ++ W SLI G A G +AI L+ M EG+ P TF +L
Sbjct: 276 AKTLFDEMV--DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGL--GLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
C+ G+++ G E R +R + + +VD+ + G + KA + M + +V
Sbjct: 334 CSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 256 S-WNSMLTAYVHHG 268
W ++L A HG
Sbjct: 393 VIWRTLLGACTVHG 406
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/466 (31%), Positives = 258/466 (55%), Gaps = 18/466 (3%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+E + +EA K I D Y Q + G Q H + + + +
Sbjct: 299 VESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNS 358
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
L+ +Y+ G + + +F M +RD + WN++IS + Q GL D+ + L ++M ++G +
Sbjct: 359 LMVMYSRCGSVHKSFGVFLSMRERDVVS--WNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
D T +L + L E+G++ H +R G +G+ + L+DMY K G I ++K+
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMN-SYLIDMYSKSGLIRISQKL 475
Query: 246 F--NRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS--- 300
F + RD +WNSM++ Y +G + F +M+ + +P+ V++++IL S
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 301 SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIIS 360
S+DLG Q+HG+ IR+ ++ N+ +A++L+ YSK G + A +F+ ER+ V++ ++I
Sbjct: 536 SVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 361 AHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIK 417
+ +H A++LF M+E+G+KPD ITFV++LSAC+Y GL+++G++++ M E Y I+
Sbjct: 596 GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
Query: 418 PIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAA 477
P EH+ C+ ++ GR G V +AY + G+G E WG+LL SC LHG + + E +
Sbjct: 656 PSSEHYCCITDMLGRVGRVNEAYEFV-KGLGEEGNIAELWGSLLGSCKLHGELELAETVS 714
Query: 478 NKLFDLEPDNEHNFA----LLMKIYENAGRLEDMERVRMMLVDRGL 519
+L D NF+ LL +Y + + +++VR + ++GL
Sbjct: 715 ERLAKF--DKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGL 758
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 198/408 (48%), Gaps = 50/408 (12%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHD-- 141
D Y+S L+ C ++ ++ G VH + L + V + L+ +Y S D +
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 142 ----LFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL-- 195
+FD M +++ A WN+LIS Y + G +A + M+ V+P +F V
Sbjct: 166 VVRKVFDNMRRKNVVA--WNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 196 ----------KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
V GL +L++G+E + D +++ + MY + G I +R++
Sbjct: 224 VSISRSIKKANVFYGL-MLKLGDE---------YVKDLFVVSSAISMYAELGDIESSRRV 273
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKP------DFVSISTILTGV 299
F+ R+ WN+M+ YV + VE+++ F + + G K ++ ++ ++ +
Sbjct: 274 FDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAI--GSKEIVSDEVTYLLAASAVSAL 331
Query: 300 SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII 359
++LG Q HG+V + E + I NSL++ YS+ G + + +F M ERDVVSWN++I
Sbjct: 332 QQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMI 391
Query: 360 SAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKI 416
SA ++ E L L +M++ G K D IT +LLSA + L G + +A + I
Sbjct: 392 SAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL-----I 446
Query: 417 KPIMEHHGC---MVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL 461
+ ++ G ++++Y ++G++ + + +G G W +++
Sbjct: 447 RQGIQFEGMNSYLIDMYSKSGLIRISQKLF-EGSGYAERDQATWNSMI 493
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 178/359 (49%), Gaps = 24/359 (6%)
Query: 102 RHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLIS 161
RH S P L + + S+L ++ G + A LFD + + + WN++I
Sbjct: 25 RHSSTFS---PPTLTPQTPSIRSRLSKICQD-GNPQLARQLFDAIPK--PTTVLWNTIII 78
Query: 162 GYAQLGLYDDAIALYFQMVEEG--VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF 219
G+ L +A+ Y +M + D +T+ LK CA L+ G+ VH H +R
Sbjct: 79 GFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQ 138
Query: 220 GNDGLGLNALVDMY------PKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEA 273
+ + N+L++MY P C RK+F+ M R++ V+WN++++ YV G EA
Sbjct: 139 NSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEA 198
Query: 274 MDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEW--NLSIANSLI 328
F M+ KP VS + VS S+ +G +++ G E+ +L + +S I
Sbjct: 199 CRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAI 258
Query: 329 IAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALF-EQMEEAGVKPDK 384
Y++ G ++++R +F+ ER++ WN++I + ++ E++ LF E + + D+
Sbjct: 259 SMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE 318
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
+T++ SA + L V G + + +++ ++ PI+ + MV +Y R G V K++ +
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVF 376
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 8/222 (3%)
Query: 58 YPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLR 117
Y Q H E+ +E+ IR + AS+L C + ++ G Q+H L
Sbjct: 496 YTQNGH--TEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD 553
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
+NV V S LV +Y+ G ++ A D+F Q +R+ + + ++I GY Q G+ + AI+L+
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQTKERN--SVTYTTMILGYGQHGMGERAISLFL 611
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRA-GFGNDGLGLNALVDMYPKC 236
M E G++PD TF VL C+ GL++ G ++ + DM +
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 237 GHIVKARKIFNRMHRRDSVS--WNSMLTAYVHHGLEVEAMDT 276
G + +A + + +++ W S+L + HG E+E +T
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHG-ELELAET 712
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/447 (32%), Positives = 255/447 (57%), Gaps = 18/447 (4%)
Query: 85 PEIYASLLETCYRSQAIRHGSQVHRLI---PTVLLRKNVGVTSKLVRLYASFGYMEDAHD 141
PE Y LL C ++++ HG ++ LI P+ LR N + SKL+ L++ ++ A
Sbjct: 131 PEAYTDLLHACISAKSLHHGIKICSLILNNPS--LRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 142 LFDQMSQRDASAFP---WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
+FD ++ D+S W ++ GY++ G DA+ +Y M+ +EP F+ LK C
Sbjct: 189 IFDDVT--DSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKAC 246
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
L L VG +H V+ D + N L+ +Y + G ARK+F+ M R+ V+WN
Sbjct: 247 VDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWN 306
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRR 315
S+++ E + F +M E + +++TIL + V+++ G +IH +++
Sbjct: 307 SLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKS 366
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
+ ++ + NSL+ Y K G ++ +R +F++M +D+ SWN +++ + + E + LF
Sbjct: 367 KEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLF 426
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
E M E+GV PD ITFV+LLS C+ GL G+ L+ M ++++ P +EH+ C+V++ GR
Sbjct: 427 EWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGR 486
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFA 492
AG +++A +I +A + WG+LL SC LHG+V++GEIAA +LF LEP N N+
Sbjct: 487 AGKIKEAVKVIETMPFKPSA--SIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYV 544
Query: 493 LLMKIYENAGRLEDMERVRMMLVDRGL 519
++ IY +A ++++++R M+ RG+
Sbjct: 545 MVSNIYADAKMWDNVDKIREMMKQRGV 571
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 254/443 (57%), Gaps = 19/443 (4%)
Query: 92 LETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDA 151
++ C I G Q H+ + ++ V+S L+ +Y++ G +EDA +FD++ +R+
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF------PRVLKVCAGLGLLE 205
W S+I GY G DA++L+ ++ + + D F V+ C+ +
Sbjct: 143 --VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 206 VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH--IVKARKIFNRMHRRDSVSWNSMLTA 263
+ E +H ++ GF N L+D Y K G + ARKIF+++ +D VS+NS+++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 264 YVHHGLEVEAMDTFCQMVLEGCKP-DFVSISTILTGVS---SMDLGVQIHGWVIRRGVEW 319
Y G+ EA + F ++V + +++ST+L VS ++ +G IH VIR G+E
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQME 376
++ + S+I Y K GR++TAR F+ M ++V SW ++I+ + H +AL LF M
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
++GV+P+ ITFVS+L+AC++ GL +G R + M ++ ++P +EH+GCMV+L GRAG +
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 437 EKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMK 496
+KAY +I W +LL +C +H +V + EI+ +LF+L+ N + LL
Sbjct: 441 QKAYDLIQR--MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSH 498
Query: 497 IYENAGRLEDMERVRMMLVDRGL 519
IY +AGR +D+ERVRM++ +RGL
Sbjct: 499 IYADAGRWKDVERVRMIMKNRGL 521
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 165/336 (49%), Gaps = 25/336 (7%)
Query: 154 FPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRH 213
F WNS+I+ A+ G +A+ + M + + P +FP +K C+ L + G++ H+
Sbjct: 42 FSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQ 101
Query: 214 AVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEA 273
A G+ +D +AL+ MY CG + ARK+F+ + +R+ VSW SM+ Y +G ++A
Sbjct: 102 AFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDA 161
Query: 274 MDTFCQMVLEGCKPD---------FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIA 324
+ F ++++ D VS+ + + V + L IH +VI+RG + +S+
Sbjct: 162 VSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVG 221
Query: 325 NSLIIAYSKHGR--LDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAG 379
N+L+ AY+K G + AR +F+ + ++D VS+NSI+S + + EA +F ++
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL---- 277
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH----GCMVNLYGRAGM 435
VK +TF ++ + L + + G I+ +E ++++Y + G
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 436 VEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVA 471
VE A + W A++ +HG A
Sbjct: 338 VETARKAFDR---MKNKNVRSWTAMIAGYGMHGHAA 370
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 13/164 (7%)
Query: 245 IFNR-MHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM- 302
+FNR + + D SWNS++ G EA+ F M P S + SS+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 303 DL--GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIIS 360
D+ G Q H G + ++ ++++LI+ YS G+L+ AR +F+ +P+R++VSW S+I
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 361 AHCKHREAL---ALFEQM------EEAGVKPDKITFVSLLSACA 395
+ + AL +LF+ + ++ + D + VS++SAC+
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 263/460 (57%), Gaps = 15/460 (3%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+ + +K +++ G+ D Y+ L++ C ++A+ G+ + R + R + + +
Sbjct: 42 LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNV 101
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
L+ +Y F + DAH LFDQM QR+ W ++IS Y++ ++ A+ L M+ + V
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNV--ISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
P+++T+ VL+ C G+ + + +H ++ G +D +AL+D++ K G A +
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSM 302
F+ M D++ WNS++ + + A++ F +M G + +++++L TG++ +
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 303 DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH 362
+LG+Q H +++ + +L + N+L+ Y K G L+ A +FN M ERDV++W+++IS
Sbjct: 277 ELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL 334
Query: 363 CKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
++ +EAL LFE+M+ +G KP+ IT V +L AC++ GL+ DG + M + Y I P+
Sbjct: 335 AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV 394
Query: 420 MEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANK 479
EH+GCM++L G+AG ++ A ++ + + E T W LL +C + ++ + E AA K
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNE-MECEPDAVT-WRTLLGACRVQRNMVLAEYAAKK 452
Query: 480 LFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ L+P++ + LL IY N+ + + +E +R + DRG+
Sbjct: 453 VIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/472 (29%), Positives = 258/472 (54%), Gaps = 46/472 (9%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
Y +L++ C +++A+ G +VH I T + + ++L+R+YA G + DA +FD+M
Sbjct: 88 YCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMP 147
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE------------------------- 182
RD + WN +++GYA++GL ++A L+ +M E+
Sbjct: 148 NRDLCS--WNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 183 -------GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPK 235
P++FT + A + + G+E+H H VRAG +D + ++L+DMY K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Query: 236 CGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTI 295
CG I +AR IF+++ +D VSW SM+ Y E F ++V +P+ + + +
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325
Query: 296 LTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV 352
L + + +LG Q+HG++ R G + ++SL+ Y+K G +++A+ + + P+ D+
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 353 VSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYAL 409
VSW S+I ++ EAL F+ + ++G KPD +TFV++LSAC + GLV G+ +
Sbjct: 386 VSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYS 445
Query: 410 MTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLH 467
+TEK+++ +H+ C+V+L R+G E+ S+I++ P++ W ++L C +
Sbjct: 446 ITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISE----MPMKPSKFLWASVLGGCSTY 501
Query: 468 GSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
G++ + E AA +LF +EP+N + + IY AG+ E+ ++R + + G+
Sbjct: 502 GNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGV 553
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 179/388 (46%), Gaps = 64/388 (16%)
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCG 237
Q++ +P T+ +++VC+ LE G++VH H +GF + N L+ MY KCG
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 238 HIVKARKIFNRMHRRD-------------------------------SVSWNSMLTAYVH 266
+V ARK+F+ M RD S SW +M+T YV
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 267 HGLEVEAMDTFCQMV-LEGCKPDFVSIS---TILTGVSSMDLGVQIHGWVIRRGVEWNLS 322
EA+ + M + +P+ ++S V + G +IHG ++R G++ +
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAG 379
+ +SL+ Y K G +D AR +F+ + E+DVVSW S+I + K RE +LF ++ +
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
+P++ TF +L+ACA L G +++ MT + P +V++Y + G +E A
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMT-RVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 440 YSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDL------EPDNEHNFAL 493
++ G W +L+ C +G A K FDL +PD+ F
Sbjct: 374 KHVVD---GCPKPDLVSWTSLIGGCAQNGQPD----EALKYFDLLLKSGTKPDHV-TFVN 425
Query: 494 LMKIYENAGRLEDMERVRMMLVDRGLDY 521
++ +AG LV++GL++
Sbjct: 426 VLSACTHAG-----------LVEKGLEF 442
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 135/439 (30%), Positives = 239/439 (54%), Gaps = 12/439 (2%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
Y S+L+TC R + G Q+H I + N V S L+ +YA G ++ A D+ + +
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
+D + W ++I+GY Q D A+ + QM++ G+ D + CAGL L+ G
Sbjct: 553 GKDVVS--WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
+++H A +GF +D NALV +Y +CG I ++ F + D+++WN++++ +
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQS 670
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIA 324
G EA+ F +M EG + + + + S +M G Q+H + + G + +
Sbjct: 671 GNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC 730
Query: 325 NSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVK 381
N+LI Y+K G + A F + ++ VSWN+II+A+ KH EAL F+QM + V+
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVR 790
Query: 382 PDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYS 441
P+ +T V +LSAC+++GLV+ G+ + M +Y + P EH+ C+V++ RAG++ +A
Sbjct: 791 PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKE 850
Query: 442 IITD-GIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYEN 500
I + I +A W LL +C +H ++ IGE AA+ L +LEP++ + LL +Y
Sbjct: 851 FIQEMPIKPDA---LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 907
Query: 501 AGRLEDMERVRMMLVDRGL 519
+ + + + R + ++G+
Sbjct: 908 SKKWDARDLTRQKMKEKGV 926
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 196/388 (50%), Gaps = 12/388 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
GI P ++S+L C + +++ G Q+H L+ + + V + LV LY G + A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+F MSQRDA + N+LI+G +Q G + A+ L+ +M +G+EPD T ++ C+
Sbjct: 343 EHIFSNMSQRDAVTY--NTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
G L G+++H + + GF ++ AL+++Y KC I A F + V WN
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRG 316
ML AY + F QM +E P+ + +IL + ++LG QIH +I+
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALFE 373
+ N + + LI Y+K G+LDTA + +DVVSW ++I+ + ++ +AL F
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
QM + G++ D++ + +SACA L + +G +++A + +V LY R
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRC 639
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALL 461
G +E++Y +EA W AL+
Sbjct: 640 GKIEESYLAFEQ---TEAGDNIAWNALV 664
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 184/395 (46%), Gaps = 12/395 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G+ D ASL+ C + G Q+H + N + L+ LYA +E A
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
D F + + WN ++ Y L ++ ++ QM E + P+ +T+P +LK C
Sbjct: 444 LDYF--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
LG LE+GE++H ++ F + + L+DMY K G + A I R +D VSW +
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTT 561
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT---GVSSMDLGVQIHGWVIRRG 316
M+ Y + + +A+ TF QM+ G + D V ++ ++ G+ ++ G QIH G
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFE 373
+L N+L+ YS+ G+++ + F D ++WN+++S + + EAL +F
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
+M G+ + TF S + A + + G +++A++T K E ++++Y +
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT-KTGYDSETEVCNALISMYAKC 740
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
G + A + W A++ + HG
Sbjct: 741 GSISDAEKQFLE---VSTKNEVSWNAIINAYSKHG 772
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 204/398 (51%), Gaps = 21/398 (5%)
Query: 77 IEKGIRIDPEIYASLLETCYR-SQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGY 135
+ + + + ++ +LE C S A Q+H I LR + V + L+ LY+ G+
Sbjct: 178 VSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF 237
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
++ A +FD + +D S+ W ++ISG ++ +AI L+ M G+ P + F VL
Sbjct: 238 VDLARRVFDGLRLKDHSS--WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVL 295
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
C + LE+GE++H ++ GF +D NALV +Y G+++ A IF+ M +RD+V
Sbjct: 296 SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAV 355
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWV 312
++N+++ G +AM+ F +M L+G +PD ++++++ S ++ G Q+H +
Sbjct: 356 TYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREAL 369
+ G N I +L+ Y+K ++TA F +VV WN ++ A+ R +
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGC--MV 427
+F QM+ + P++ T+ S+L C LG + G ++++ + K + + C ++
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII---KTNFQLNAYVCSVLI 532
Query: 428 NLYGRAGMVEKAYSIITDGIGSEA-------AGPTQWG 458
++Y + G ++ A+ I+ G + AG TQ+
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 159/311 (51%), Gaps = 7/311 (2%)
Query: 61 TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
T++ ++ L +++GIR D + + C QA++ G Q+H ++
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
+ LV LY+ G +E+++ F+Q D A WN+L+SG+ Q G ++A+ ++ +M
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA--WNALVSGFQQSGNNEEALRVFVRMN 684
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
EG++ + FTF +K + ++ G++VH + G+ ++ NAL+ MY KCG I
Sbjct: 685 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
A K F + ++ VSWN+++ AY HG EA+D+F QM+ +P+ V++ +L+ S
Sbjct: 745 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Query: 301 SMDLGVQIHGWVIRRGVEWNLSIANS----LIIAYSKHGRLDTARWLFNLMPER-DVVSW 355
+ L + + E+ LS ++ ++ G L A+ MP + D + W
Sbjct: 805 HIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVW 864
Query: 356 NSIISAHCKHR 366
+++SA H+
Sbjct: 865 RTLLSACVVHK 875
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 152/323 (47%), Gaps = 30/323 (9%)
Query: 183 GVEPDLFTFPRVLKVCAGL-GLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
G+ P+ T +L+ C G L+ G ++H ++ G ++G L D Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 242 ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT---- 297
A K+F+ M R +WN M+ L E F +MV E P+ + S +L
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 298 GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNS 357
G + D+ QIH ++ +G+ + + N LI YS++G +D AR +F+ + +D SW +
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 358 IISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKY 414
+IS K+ EA+ LF M G+ P F S+LSAC + + G +L+ L+
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV---L 315
Query: 415 KIKPIMEHHGC--MVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG--SV 470
K+ + + C +V+LY G + A I ++ +Q A+ Y+ ++G
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN--------MSQRDAVTYNTLINGLSQC 367
Query: 471 AIGEIAANKLFD------LEPDN 487
GE A +LF LEPD+
Sbjct: 368 GYGE-KAMELFKRMHLDGLEPDS 389
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 253/454 (55%), Gaps = 14/454 (3%)
Query: 72 DIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYA 131
D+E S I D Y +LL+ C + + G VH I + R ++ + + L+ +YA
Sbjct: 50 DLEGSY---IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYA 106
Query: 132 SFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF 191
G +E+A +F++M QRD W +LISGY+Q DA+ + QM+ G P+ FT
Sbjct: 107 KCGSLEEARKVFEKMPQRDF--VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTL 164
Query: 192 PRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR 251
V+K A G ++H V+ GF ++ +AL+D+Y + G + A+ +F+ +
Sbjct: 165 SSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224
Query: 252 RDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQI 308
R+ VSWN+++ + +A++ F M+ +G +P S +++ SS ++ G +
Sbjct: 225 RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 309 HGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH--- 365
H ++I+ G + N+L+ Y+K G + AR +F+ + +RDVVSWNS+++A+ +H
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFG 344
Query: 366 REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGC 425
+EA+ FE+M G++P++I+F+S+L+AC++ GL+++G Y LM +K I P H+
Sbjct: 345 KEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVT 403
Query: 426 MVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEP 485
+V+L GRAG + +A I + A W ALL +C +H + +G AA +F+L+P
Sbjct: 404 VVDLLGRAGDLNRALRFIEEMPIEPTAAI--WKALLNACRMHKNTELGAYAAEHVFELDP 461
Query: 486 DNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
D+ +L IY + GR D RVR + + G+
Sbjct: 462 DDPGPHVILYNIYASGGRWNDAARVRKKMKESGV 495
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 3/209 (1%)
Query: 60 QTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKN 119
+ E+ L+ + + G R YASL C + + G VH + +
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM 179
+ L+ +YA G + DA +FD++++RD + WNSL++ YAQ G +A+ + +M
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS--WNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
G+ P+ +F VL C+ GLL+ G + + G + +VD+ + G +
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 240 VKARKIFNRMHRRDSVS-WNSMLTAYVHH 267
+A + M + + W ++L A H
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMH 443
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/497 (30%), Positives = 259/497 (52%), Gaps = 61/497 (12%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E G R D ++L C G Q+H T + +N+ V + LV +YA G M+
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMD 281
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE--------------- 182
+A+ +F MS +D + WN++++GY+Q+G ++DA+ L+ +M EE
Sbjct: 282 EANTVFSNMSVKDVVS--WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 183 --------------------GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVR------ 216
G++P+ T VL CA +G L G+E+H +A++
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLR 399
Query: 217 -AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM--HRRDSVSWNSMLTAYVHHGLEVEA 273
G G++ + +N L+DMY KC + AR +F+ + RD V+W M+ Y HG +A
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 274 MDTFCQMVLEGC--KPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWN---LSIAN 325
++ +M E C +P+ +IS L +S+ +G QIH + +R + N L ++N
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLFVSN 517
Query: 326 SLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKP 382
LI Y+K G + AR +F+ M ++ V+W S+++ + H EAL +F++M G K
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 383 DKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
D +T + +L AC++ G+++ G+ + M + + P EH+ C+V+L GRAG + A +
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 443 ITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAG 502
I + P W A L C +HG V +GE AA K+ +L +++ ++ LL +Y NAG
Sbjct: 638 IEE--MPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAG 695
Query: 503 RLEDMERVRMMLVDRGL 519
R +D+ R+R ++ +G+
Sbjct: 696 RWKDVTRIRSLMRHKGV 712
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 210/451 (46%), Gaps = 68/451 (15%)
Query: 85 PEIYASLLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
PEI + C + I +H +L+ +L N+ TS L+ Y S G + A L
Sbjct: 28 PEITPPFIHKC---KTISQVKLIHQKLLSFGILTLNL--TSHLISTYISVGCLSHAVSLL 82
Query: 144 DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGL 203
+ DA + WNSLI Y G + + L+ M PD +TFP V K C +
Sbjct: 83 RRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISS 142
Query: 204 LEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTA 263
+ GE H ++ GF ++ NALV MY +C + ARK+F+ M D VSWNS++ +
Sbjct: 143 VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIES 202
Query: 264 YVHHGLEVEAMDTFCQMVLE-GCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEW 319
Y G A++ F +M E GC+PD +++ +L +S+ LG Q+H + + +
Sbjct: 203 YAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ 262
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQME 376
N+ + N L+ Y+K G +D A +F+ M +DVVSWN++++ + + +A+ LFE+M+
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ 322
Query: 377 E-----------------------------------AGVKPDKITFVSLLSACAYLGLVN 401
E +G+KP+++T +S+LS CA +G +
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Query: 402 DG--VRLYALMTEKYKIKPIMEHHG-------CMVNLYGRAGMVEKAYSIITDGIGSEAA 452
G + YA+ KY I HG ++++Y + V+ A ++ D + +
Sbjct: 383 HGKEIHCYAI---KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMF-DSLSPKER 438
Query: 453 GPTQWGALLYSCYLHGSVAIGEIAANKLFDL 483
W ++ HG ANK +L
Sbjct: 439 DVVTWTVMIGGYSQHGD-------ANKALEL 462
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 230/517 (44%), Gaps = 95/517 (18%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
D + + + C ++R G H L NV V + LV +Y+ + DA +F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 144 DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE-GVEPDLFTFPRVLKVCAGLG 202
D+MS D + WNS+I YA+LG A+ ++ +M E G PD T VL CA LG
Sbjct: 186 DEMSVWDVVS--WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSM-- 260
+G+++H AV + + N LVDMY KCG + +A +F+ M +D VSWN+M
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 261 ---------------------------------LTAYVHHGLEVEAMDTFCQMVLEGCKP 287
++ Y GL EA+ QM+ G KP
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 288 DFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLS-------IANSLIIAYSKHGRL 337
+ V++ ++L+G +S+ G +IH + I+ ++ + + N LI Y+K ++
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 338 DTARWLFN-LMP-ERDVVSWNSIISAHCKH---REALALFEQM--EEAGVKPDKITFVSL 390
DTAR +F+ L P ERDVV+W +I + +H +AL L +M E+ +P+ T
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 391 LSACAYLGLVNDG--VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA--------- 439
L ACA L + G + YAL ++ + + + C++++Y + G + A
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSN--CLIDMYAKCGSISDARLVFDNMMA 541
Query: 440 -----YSIITDGIGSEAAGPTQWG------------------ALLYSCYLHGSVAIGEIA 476
++ + G G G G +LY+C G + G
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 477 ANKL---FDLEPDNEHNFALLMKIYENAGRLEDMERV 510
N++ F + P EH +A L+ + AGRL R+
Sbjct: 602 FNRMKTVFGVSPGPEH-YACLVDLLGRAGRLNAALRL 637
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 168/365 (46%), Gaps = 39/365 (10%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVH--RLIPTVLLRKNVG-----VTSKLVRL 129
+ GI+ + S+L C A+ HG ++H + + LRKN V ++L+ +
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDM 416
Query: 130 YASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE--PD 187
YA ++ A +FD +S ++ W +I GY+Q G + A+ L +M EE + P+
Sbjct: 417 YAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPN 476
Query: 188 LFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIF 246
FT L CA L L +G+++H +A+R L + N L+DMY KCG I AR +F
Sbjct: 477 AFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVF 536
Query: 247 NRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGV 306
+ M ++ V+W S++T Y HG EA+ F +M G K D V++ +L S
Sbjct: 537 DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS------ 590
Query: 307 QIHGWVIRRGVEWNLSIAN------------SLIIAYSKHGRLDTARWLFNLMP-ERDVV 353
H +I +G+E+ + L+ + GRL+ A L MP E V
Sbjct: 591 --HSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 354 SWNSIISAHCKHREALALFEQMEE-----AGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
W + +S C+ + L E E A T +S L A A G D R+ +
Sbjct: 649 VWVAFLSC-CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA--GRWKDVTRIRS 705
Query: 409 LMTEK 413
LM K
Sbjct: 706 LMRHK 710
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 246/449 (54%), Gaps = 10/449 (2%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I ++ Y +L+E C R ++IR +V+ + + + ++++ ++ G +
Sbjct: 115 IRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMI 174
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
DA LFD++ +R+ + + S+ISG+ G Y +A L+ M EE + + TF +L+
Sbjct: 175 IDARRLFDEIPERNL--YSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLR 232
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
AGLG + VG+++H A++ G ++ L+DMY KCG I AR F M + +V+
Sbjct: 233 ASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVA 292
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVI 313
WN+++ Y HG EA+ M G D ++S ++ T ++ ++L Q H +I
Sbjct: 293 WNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLI 352
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALA 370
R G E + +L+ YSK GR+DTAR++F+ +P ++++SWN+++ + H +A+
Sbjct: 353 RNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVK 412
Query: 371 LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLY 430
LFE+M A V P+ +TF+++LSACAY GL G ++ M+E + IKP H+ CM+ L
Sbjct: 413 LFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELL 472
Query: 431 GRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHN 490
GR G++++A + I W ALL +C + ++ +G + A KL+ + P+ N
Sbjct: 473 GRDGLLDEAIAFIRR--APLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGN 530
Query: 491 FALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ ++ +Y + G+ + V L +GL
Sbjct: 531 YVVMYNMYNSMGKTAEAAGVLETLESKGL 559
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 250/477 (52%), Gaps = 53/477 (11%)
Query: 85 PEIYASLLETCYRSQAIRHGSQVHRLI--PTVLLRKNVGVTS-KLVRLYASFGYMEDAHD 141
PE A L++ +SQ++ Q+H I +LL V + KL R YAS G + +
Sbjct: 29 PEKLAVLID---KSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLA 85
Query: 142 LFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGL 201
LF Q D F + + I+ + GL D A LY Q++ + P+ FTF +LK C+
Sbjct: 86 LFHQTI--DPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS-- 141
Query: 202 GLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR--------- 252
+ G+ +H H ++ G G D LVD+Y K G +V A+K+F+RM R
Sbjct: 142 --TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMI 199
Query: 253 ----------------------DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC-KPDF 289
D VSWN M+ Y HG +A+ F +++ EG KPD
Sbjct: 200 TCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDE 259
Query: 290 VSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
+++ L+ S +++ G IH +V + N+ + LI YSK G L+ A +FN
Sbjct: 260 ITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND 319
Query: 347 MPERDVVSWNSIISAHCKH---REALALFEQMEE-AGVKPDKITFVSLLSACAYLGLVND 402
P +D+V+WN++I+ + H ++AL LF +M+ G++P ITF+ L ACA+ GLVN+
Sbjct: 320 TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 403 GVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLY 462
G+R++ M ++Y IKP +EH+GC+V+L GRAG +++AY I + + A W ++L
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN--MNMDADSVLWSSVLG 437
Query: 463 SCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
SC LHG +G+ A L L N + LL IY + G E + +VR ++ ++G+
Sbjct: 438 SCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGI 494
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/447 (31%), Positives = 242/447 (54%), Gaps = 14/447 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G++ D Y + C + + I G VH + V L ++V + L+ +YA G + A
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYA 186
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
LFD++++RD + WNS+ISGY++ G DA+ L+ +M EEG EPD T +L C+
Sbjct: 187 RKLFDEITERDTVS--WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACS 244
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
LG L G + A+ G + L+ MY KCG + AR++FN+M ++D V+W +
Sbjct: 245 HLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTA 304
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRG 316
M+T Y +G EA F +M G PD ++ST+L+ V +++LG QI
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS 364
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFE 373
++ N+ +A L+ Y K GR++ A +F MP ++ +WN++I+A+ +EAL LF+
Sbjct: 365 LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD 424
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
+M V P ITF+ +LSAC + GLV+ G R + M+ + + P +EH+ +++L RA
Sbjct: 425 RM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 481
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDL-EPDNEHNFA 492
GM+++A+ + G A+L +C+ VAI E A L ++ E N N+
Sbjct: 482 GMLDEAWEFMERFPGK--PDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 539
Query: 493 LLMKIYENAGRLEDMERVRMMLVDRGL 519
+ + + ++ ++R ++ DRG+
Sbjct: 540 ISSNVLADMKMWDESAKMRALMRDRGV 566
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 208/431 (48%), Gaps = 34/431 (7%)
Query: 45 KPKSTPLLIHQQPYPQTKHQAIEQVLK-DIEASIEKGIRIDPEIYASLLETCYRSQAIRH 103
KP+ I++Q +P+ K + E+ + D+E + LL+ C +R
Sbjct: 8 KPEKLAFSIYRQ-FPKFKPRQFEEARRGDLERD-----------FLFLLKKCISVNQLRQ 55
Query: 104 GSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGY 163
I +L +V + L+ G + LF + + +F N +I G
Sbjct: 56 -------IQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSF--NYMIRGL 106
Query: 164 AQL-GLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGND 222
++ A++LY +M G++PD FT+ V CA L + VG VH + G D
Sbjct: 107 TNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERD 166
Query: 223 GLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVL 282
++L+ MY KCG + ARK+F+ + RD+VSWNSM++ Y G +AMD F +M
Sbjct: 167 VHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE 226
Query: 283 EGCKPDFVSISTILTGVSSM-DL--GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDT 339
EG +PD ++ ++L S + DL G + I + + + + + LI Y K G LD+
Sbjct: 227 EGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDS 286
Query: 340 ARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAY 396
AR +FN M ++D V+W ++I+ + K EA LF +ME+ GV PD T ++LSAC
Sbjct: 287 ARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGS 346
Query: 397 LGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ 456
+G + G ++ +E I G +V++YG+ G VE+A +
Sbjct: 347 VGALELGKQIETHASELSLQHNIYVATG-LVDMYGKCGRVEEALRVFE---AMPVKNEAT 402
Query: 457 WGALLYSCYLH 467
W A++ + Y H
Sbjct: 403 WNAMI-TAYAH 412
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 234/432 (54%), Gaps = 11/432 (2%)
Query: 87 IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM 146
I+ S L+ C +GSQ+H L L N L +YA G++ A +FDQ+
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEV 206
+ D ++ WN +I+G A G D+A++++ QM G PD + +L L
Sbjct: 332 ERPDTAS--WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQ 389
Query: 207 GEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR-DSVSWNSMLTAYV 265
G ++H + ++ GF D N+L+ MY C + +F DSVSWN++LTA +
Sbjct: 390 GMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACL 449
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLS 322
H VE + F M++ C+PD +++ +L G +SS+ LG Q+H + ++ G+
Sbjct: 450 QHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF 509
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAG 379
I N LI Y+K G L AR +F+ M RDVVSW+++I + + EAL LF++M+ AG
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG 569
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
++P+ +TFV +L+AC+++GLV +G++LYA M ++ I P EH C+V+L RAG + +A
Sbjct: 570 IEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEA 629
Query: 440 YSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYE 499
I D + E W LL +C G+V + + AA + ++P N LL ++
Sbjct: 630 ERFI-DEMKLE-PDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHA 687
Query: 500 NAGRLEDMERVR 511
++G E+ +R
Sbjct: 688 SSGNWENAALLR 699
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 198/400 (49%), Gaps = 12/400 (3%)
Query: 75 ASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFG 134
A +I Y SL+ C S+++ G ++H I + + + + ++ +Y G
Sbjct: 57 AQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCG 116
Query: 135 YMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRV 194
+ DA ++FD M +R+ ++ S+I+GY+Q G +AI LY +M++E + PD F F +
Sbjct: 117 SLRDAREVFDFMPERNLVSY--TSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSI 174
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
+K CA + +G+++H ++ + + NAL+ MY + + A ++F + +D
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDL 234
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC-KPDFVSISTILTGVSSM---DLGVQIHG 310
+SW+S++ + G E EA+ +M+ G P+ + L SS+ D G QIHG
Sbjct: 235 ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHG 294
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---RE 367
I+ + N SL Y++ G L++AR +F+ + D SWN II+ + E
Sbjct: 295 LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE 354
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
A+++F QM +G PD I+ SLL A ++ G+++++ + K+ + ++
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII-KWGFLADLTVCNSLL 413
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLH 467
+Y + +++ D + A W +L +C H
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNN--ADSVSWNTILTACLQH 451
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 249/450 (55%), Gaps = 20/450 (4%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
G + D S L C + + G ++H + + + +V V + ++ +Y+ +G +
Sbjct: 226 GFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSY 285
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE-GVEPDLFTFPRVLKV 197
A +F+ M QR+ A WN +I YA+ G DA + +M E+ G++PD+ T +L
Sbjct: 286 AERIFNGMIQRNIVA--WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
A +LE G +H +A+R GF + AL+DMY +CG + A IF+RM ++ +SW
Sbjct: 344 SA---ILE-GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISW 399
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIR 314
NS++ AYV +G A++ F ++ PD +I++IL + S+ G +IH ++++
Sbjct: 400 NSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK 459
Query: 315 RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALAL 371
N I NSL+ Y+ G L+ AR FN + +DVVSWNSII A+ H R ++ L
Sbjct: 460 SRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWL 519
Query: 372 FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYG 431
F +M + V P+K TF SLL+AC+ G+V++G + M +Y I P +EH+GCM++L G
Sbjct: 520 FSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIG 579
Query: 432 RAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEH 489
R G A + + PT WG+LL + H + I E AA ++F +E DN
Sbjct: 580 RTGNFSAAKRFLEE----MPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTG 635
Query: 490 NFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ LL+ +Y AGR ED+ R+++++ +G+
Sbjct: 636 CYVLLLNMYAEAGRWEDVNRIKLLMESKGI 665
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 217/395 (54%), Gaps = 14/395 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G++ D Y ++++ ++ G ++H ++ + +V V + L+ LY G DA
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+F++M +RD WNS+ISGY LG ++ L+ +M++ G +PD F+ L C+
Sbjct: 185 EKVFEEMPERD--IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 200 GLGLLEVGEEVHRHAVRAGF-GNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
+ ++G+E+H HAVR+ D + + +++DMY K G + A +IFN M +R+ V+WN
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLE-GCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGV 317
M+ Y +G +A F +M + G +PD ++ +L + ++ G IHG+ +RRG
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE-GRTIHGYAMRRGF 361
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQ 374
++ + +LI Y + G+L +A +F+ M E++V+SWNSII+A+ K+ AL LF++
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE 421
Query: 375 MEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA-LMTEKYKIKPIMEHHGCMVNLYGRA 433
+ ++ + PD T S+L A A +++G ++A ++ +Y I+ + +V++Y
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS--LVHMYAMC 479
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
G +E A + + W +++ + +HG
Sbjct: 480 GDLEDARKCFNHILLKDV---VSWNSIIMAYAVHG 511
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 183/328 (55%), Gaps = 15/328 (4%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
++ +R +A MEDA LFD+M++ DA F WN +I G+ GLY +A+ Y +MV G
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADA--FLWNVMIKGFTSCGLYIEAVQFYSRMVFAG 125
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
V+ D FT+P V+K AG+ LE G+++H ++ GF +D N+L+ +Y K G A
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 244 KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS--- 300
K+F M RD VSWNSM++ Y+ G ++ F +M+ G KPD S + L S
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 301 SMDLGVQIHGWVIRRGVEW-NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII 359
S +G +IH +R +E ++ + S++ YSK+G + A +FN M +R++V+WN +I
Sbjct: 246 SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305
Query: 360 SAHCKH---REALALFEQM-EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYK 415
+ ++ +A F++M E+ G++PD IT ++LL A A L +G ++ +
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRR-G 360
Query: 416 IKPIMEHHGCMVNLYGRAGMVEKAYSII 443
P M ++++YG G ++ A I
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIF 388
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 244/445 (54%), Gaps = 18/445 (4%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
GI D + SLL+ + + +VH L + + V S LV Y+ F +ED
Sbjct: 155 NGILPDKYTFPSLLKGS-DAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVED 213
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A +FD++ RD S WN+L++GY+Q+ ++DA+ ++ +M EEGV T VL
Sbjct: 214 AQKVFDELPDRDDSVL-WNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAF 272
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
G ++ G +H AV+ G G+D + NAL+DMY K + +A IF M RD +WN
Sbjct: 273 TVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWN 332
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRR 315
S+L + + G + F +M+ G +PD V+++T+L ++S+ G +IHG++I
Sbjct: 333 SVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVS 392
Query: 316 GV----EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH----CKHRE 367
G+ N I NSL+ Y K G L AR +F+ M +D SWN +I+ + C
Sbjct: 393 GLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGEL- 451
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
AL +F M AGVKPD+ITFV LL AC++ G +N+G A M Y I P +H+ C++
Sbjct: 452 ALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVI 511
Query: 428 NLYGRAGMVEKAYSI-ITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD 486
++ GRA +E+AY + I+ I P W ++L SC LHG+ + +A +L +LEP+
Sbjct: 512 DMLGRADKLEEAYELAISKPI---CDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPE 568
Query: 487 NEHNFALLMKIYENAGRLEDMERVR 511
+ + L+ +Y AG+ E++ VR
Sbjct: 569 HCGGYVLMSNVYVEAGKYEEVLDVR 593
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 203/410 (49%), Gaps = 31/410 (7%)
Query: 92 LETCYRSQAIRHGSQVHR-LIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
L+ C + + G Q+H ++ L + + LV +YA G M A +F S+RD
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERD 125
Query: 151 ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
F +N+LISG+ G DA+ Y +M G+ PD +TFP +LK + L +V ++V
Sbjct: 126 V--FGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKV 182
Query: 211 HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM-HRRDSVSWNSMLTAYVHHGL 269
H A + GF +D + LV Y K + A+K+F+ + R DSV WN+++ Y
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 270 EVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANS 326
+A+ F +M EG +I+++L+ + +D G IHG ++ G ++ ++N+
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 327 LIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH--C-KHREALALFEQMEEAGVKPD 383
LI Y K L+ A +F M ERD+ +WNS++ H C H LALFE+M +G++PD
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 384 KITFVSLLSACAYLGLVNDGVRL--YALMTEKYKIKPIMEH-HGCMVNLYGRAGMVEKA- 439
+T ++L C L + G + Y +++ K E H ++++Y + G + A
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 440 -------------YSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIA 476
++I+ +G G ++ G + ++SC V EI
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCG--ELALDMFSCMCRAGVKPDEIT 470
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 11/293 (3%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E+G+ + S+L S I +G +H L ++ V++ L+ +Y ++E
Sbjct: 255 EEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLE 314
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
+A+ +F+ M +RD F WNS++ + G +D +AL+ +M+ G+ PD+ T VL
Sbjct: 315 EANSIFEAMDERD--LFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPT 372
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGN----DGLGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
C L L G E+H + + +G N + N+L+DMY KCG + AR +F+ M +D
Sbjct: 373 CGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKD 432
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVI 313
S SWN M+ Y A+D F M G KPD ++ +L S + ++
Sbjct: 433 SASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLA 492
Query: 314 RRGVEWN-LSIANSLIIAYSKHGRLDTARWLFNLMPERDV----VSWNSIISA 361
+ +N L ++ GR D + L + + V W SI+S+
Sbjct: 493 QMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSS 545
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 73 IEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVH--RLIPTVLLRK--NVGVTSKLVR 128
E + GIR D ++L TC R ++R G ++H ++ +L RK N + + L+
Sbjct: 351 FERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMD 410
Query: 129 LYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDL 188
+Y G + DA +FD M +D+++ WN +I+GY + A+ ++ M GV+PD
Sbjct: 411 MYVKCGDLRDARMVFDSMRVKDSAS--WNIMINGYGVQSCGELALDMFSCMCRAGVKPDE 468
Query: 189 FTFPRVLKVCAGLGLLEVG 207
TF +L+ C+ G L G
Sbjct: 469 ITFVGLLQACSHSGFLNEG 487
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 248/461 (53%), Gaps = 17/461 (3%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYA--SLLETCYRSQAIRHGSQVHRLIPTVLLRKN 119
K A+ + ++ S+ K + P++YA S+L +C A+ G+QVH L +
Sbjct: 326 KQNALHKEAMELFTSMSK-FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGL---YDDAIALY 176
VT+ L+ +YA + DA +FD + D F N++I GY++LG +A+ ++
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF--NAMIEGYSRLGTQWELHEALNIF 442
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
M + P L TF +L+ A L L + +++H + G D +AL+D+Y C
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC 502
Query: 237 GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSIS 293
+ +R +F+ M +D V WNSM YV EA++ F ++ L +PD F ++
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMV 562
Query: 294 TILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVV 353
T ++S+ LG + H +++RG+E N I N+L+ Y+K G + A F+ RDVV
Sbjct: 563 TAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV 622
Query: 354 SWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
WNS+IS++ H ++AL + E+M G++P+ ITFV +LSAC++ GLV DG++ + LM
Sbjct: 623 CWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Query: 411 TEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSV 470
++ I+P EH+ CMV+L GRAG + KA +I AA W +LL C G+V
Sbjct: 683 L-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA--IVWRSLLSGCAKAGNV 739
Query: 471 AIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVR 511
+ E AA +P + +F +L IY + G + ++VR
Sbjct: 740 ELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVR 780
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 212/417 (50%), Gaps = 24/417 (5%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
++V V + L+ Y G ++ A +FD + ++ S W ++ISG ++G ++ L++
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEK--STVTWTTMISGCVKMGRSYVSLQLFY 238
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCG 237
Q++E+ V PD + VL C+ L LE G+++H H +R G D +N L+D Y KCG
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 238 HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
++ A K+FN M ++ +SW ++L+ Y + L EAM+ F M G KPD + S+ILT
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 298 GVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
+S + G Q+H + I+ + + + NSLI Y+K L AR +F++ DVV
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418
Query: 355 WNSIISAHCK------HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
+N++I + + EAL +F M ++P +TFVSLL A A L + +++
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478
Query: 409 LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
LM KY + + ++++Y ++ + + + + W + +++ Y+
Sbjct: 479 LMF-KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE---MKVKDLVIWNS-MFAGYVQQ 533
Query: 469 SVAIGEIAANKLFDLE-----PDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
S E A N +L+ PD E FA ++ N ++ + L+ RGL+
Sbjct: 534 SE--NEEALNLFLELQLSRERPD-EFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 221/451 (49%), Gaps = 21/451 (4%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+E + D I +++L C + G Q+H I L + + + L+ Y G +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
AH LF+ M ++ W +L+SGY Q L+ +A+ L+ M + G++PD++ +L
Sbjct: 301 IAAHKLFNGMPNKN--IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
CA L L G +VH + ++A GND N+L+DMY KC + ARK+F+ D V
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418
Query: 257 WNSMLTAYVHHGLEV---EAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHG 310
+N+M+ Y G + EA++ F M +P FVS+ ++S+ L QIHG
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HRE 367
+ + G+ ++ ++LI YS L +R +F+ M +D+V WNS+ + + + + E
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEE 538
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA-LMTEKYKIKPIMEHHGCM 426
AL LF +++ + +PD+ TF ++++A L V G + L+ + P + + +
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN--AL 596
Query: 427 VNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFD--LE 484
+++Y + G E A+ + W +++ S HG K+ +E
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVC---WNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 485 PDNEHNFALLMKIYENAGRLED-MERVRMML 514
P N F ++ +AG +ED +++ +ML
Sbjct: 654 P-NYITFVGVLSACSHAGLVEDGLKQFELML 683
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 190/353 (53%), Gaps = 16/353 (4%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+E V D ++I GIR E +A LL+ + + + VH I L + +++
Sbjct: 28 LEFVNADFPSTI--GIRGRRE-FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNI 84
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
L+ LY+ G M A +F++M +R+ + W++++S G+Y++++ ++ + +
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVS--WSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 186 -PDLFTFPRVLKVCAGL---GLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
P+ + ++ C+GL G V ++ V++GF D L+D Y K G+I
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVF-QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDY 201
Query: 242 ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS 301
AR +F+ + + +V+W +M++ V G ++ F Q++ + PD +ST+L+ S
Sbjct: 202 ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSI 261
Query: 302 MDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI 358
+ G QIH ++R G+E + S+ N LI +Y K GR+ A LFN MP ++++SW ++
Sbjct: 262 LPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 359 ISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
+S + + H+EA+ LF M + G+KPD S+L++CA L + G +++A
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 151/308 (49%), Gaps = 17/308 (5%)
Query: 191 FPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH 250
F R+L++ A LL VH + G D N L+++Y + G +V ARK+F +M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 251 RRDSVSWNSMLTAYVHHGLEVEAMDTFCQM-VLEGCKPDFVSISTILTGVSSMD-----L 304
R+ VSW++M++A HHG+ E++ F + P+ +S+ + S +D +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
Q+ ++++ G + ++ + LI Y K G +D AR +F+ +PE+ V+W ++IS K
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 365 HRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIME 421
+L LF Q+ E V PD ++LSAC+ L + G +++A + +Y ++
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL-RYGLEMDAS 285
Query: 422 HHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSV---AIGEIAAN 478
+++ Y + G V A+ + G W LL S Y ++ A+ +
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFN---GMPNKNIISWTTLL-SGYKQNALHKEAMELFTSM 341
Query: 479 KLFDLEPD 486
F L+PD
Sbjct: 342 SKFGLKPD 349
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/445 (32%), Positives = 234/445 (52%), Gaps = 43/445 (9%)
Query: 99 QAIRHGSQVHRLI--PTVLLRKNVGVTSKLVRLYASF------------------GYMED 138
Q I+ G + + L+ P + + NVG S +++ G +ED
Sbjct: 164 QVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIED 223
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A LF M + S W ++I G AQ GL +AI + +M +G++ D + F VL C
Sbjct: 224 ALQLFRGMEKDSVS---WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPAC 280
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
GLG + G+++H +R F + +AL+DMY KC + A+ +F+RM +++ VSW
Sbjct: 281 GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWT 340
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRR 315
+M+ Y G EA+ F M G PD ++ ++ VSS++ G Q HG I
Sbjct: 341 AMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS 400
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALF 372
G+ ++++NSL+ Y K G +D + LFN M RD VSW +++SA+ + E + LF
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLF 460
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
++M + G+KPD +T ++SAC+ GLV G R + LMT +Y I P + H+ CM++L+ R
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520
Query: 433 AGMVEKAYSIIT------DGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD 486
+G +E+A I D IG W LL +C G++ IG+ AA L +L+P
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIG--------WTTLLSACRNKGNLEIGKWAAESLIELDPH 572
Query: 487 NEHNFALLMKIYENAGRLEDMERVR 511
+ + LL IY + G+ + + ++R
Sbjct: 573 HPAGYTLLSSIYASKGKWDSVAQLR 597
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 166/310 (53%), Gaps = 8/310 (2%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+G+++D + S+L C AI G Q+H I + ++ V S L+ +Y +
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A +FD+M Q++ + W +++ GY Q G ++A+ ++ M G++PD +T + + C
Sbjct: 324 AKTVFDRMKQKNVVS--WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
A + LE G + H A+ +G + N+LV +Y KCG I + ++FN M+ RD+VSW
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVE 318
+M++AY G VE + F +MV G KPD V+++ +++ S L + + E
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 319 WNL--SIA--NSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISAHCKHREALALFE 373
+ + SI + +I +S+ GRL+ A N MP D + W +++SA C+++ L + +
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA-CRNKGNLEIGK 560
Query: 374 QMEEAGVKPD 383
E+ ++ D
Sbjct: 561 WAAESLIELD 570
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 216/483 (44%), Gaps = 55/483 (11%)
Query: 81 IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
IR P L + A+ S R + + + N+ + L+ Y+ G + +
Sbjct: 33 IRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEME 92
Query: 141 DLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE-GVEPDLFTFPRVLKVCA 199
F+++ RD WN LI GY+ GL A+ Y M+ + T +LK+ +
Sbjct: 93 STFEKLPDRDG--VTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSS 150
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN------------ 247
G + +G+++H ++ GF + L + L+ MY G I A+K+F
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNS 210
Query: 248 ------------------RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD- 288
R +DSVSW +M+ +GL EA++ F +M ++G K D
Sbjct: 211 LMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 289 --FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
F S+ G+ +++ G QIH +IR + ++ + ++LI Y K L A+ +F+
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 347 MPERDVVSWNSIISAH---CKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG 403
M +++VVSW +++ + + EA+ +F M+ +G+ PD T +SACA + + +G
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 404 VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYS 463
+ + I + + +V LYG+ G ++ + + + +A W A++ S
Sbjct: 391 SQFHGKAITSGLIHYVTVSNS-LVTLYGKCGDIDDSTRLFNEMNVRDA---VSWTAMV-S 445
Query: 464 CYLHGSVAIGEIAANKLFD------LEPDNEHNFALLMKIYENAGRLEDMER-VRMMLVD 516
Y A+ I +LFD L+PD ++ AG +E +R ++M +
Sbjct: 446 AYAQFGRAVETI---QLFDKMVQHGLKPDGV-TLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 517 RGL 519
G+
Sbjct: 502 YGI 504
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 242/446 (54%), Gaps = 14/446 (3%)
Query: 81 IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
+R+ +AS+++ C + +R Q+H + + + + L+ Y+ M DA
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 141 DLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAG 200
LF ++ + W ++ISG+ Q ++A+ L+ +M +GV P+ FT+ +L
Sbjct: 351 RLFKEIGCV-GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 201 LGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSM 260
+ EVH V+ + AL+D Y K G + +A K+F+ + +D V+W++M
Sbjct: 410 IS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS----SMDLGVQIHGWVIRRG 316
L Y G A+ F ++ G KP+ + S+IL + SM G Q HG+ I+
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHREA---LALFE 373
++ +L ++++L+ Y+K G +++A +F E+D+VSWNS+IS + +H +A L +F+
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
+M++ VK D +TF+ + +AC + GLV +G + + +M KI P EH+ CMV+LY RA
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFAL 493
G +EKA +I + AG T W +L +C +H +G +AA K+ ++P++ + L
Sbjct: 646 GQLEKAMKVIEN--MPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 494 LMKIYENAGRLEDMERVRMMLVDRGL 519
L +Y +G ++ +VR ++ +R +
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNV 729
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 215/432 (49%), Gaps = 30/432 (6%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G+ +D I++S+L+ G Q+H +V V + LV Y +D
Sbjct: 88 GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG 147
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+FD+M +R+ W +LISGYA+ + D+ + L+ +M EG +P+ FTF L V A
Sbjct: 148 RKVFDEMKERNV--VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLA 205
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
G+ G +VH V+ G N+L+++Y KCG++ KAR +F++ + V+WNS
Sbjct: 206 EEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNS 265
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCK---PDFVSISTILTGVSSMDLGVQIHGWVIRRG 316
M++ Y +GL++EA+ F M L + F S+ + + + Q+H V++ G
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 317 VEWNLSIANSLIIAYSK-HGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
++ +I +L++AYSK LD R + +VVSW ++IS ++ EA+ LF
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
+M+ GV+P++ T+ +L+A L +++ ++ Y+ + +++ Y +
Sbjct: 386 SEMKRKGVRPNEFTYSVILTA---LPVISPSEVHAQVVKTNYERSSTV--GTALLDAYVK 440
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI-AANKLF------DLEP 485
G VE+A + + G + W A+ L G GE AA K+F ++P
Sbjct: 441 LGKVEEAAKVFS---GIDDKDIVAWSAM-----LAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 486 DNEHNFALLMKI 497
NE F+ ++ +
Sbjct: 493 -NEFTFSSILNV 503
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 149/281 (53%), Gaps = 12/281 (4%)
Query: 127 VRLYA----SFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
VR+Y S + +AH+LFD+ RD ++ SL+ G+++ G +A L+ +
Sbjct: 30 VRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYI--SLLFGFSRDGRTQEAKRLFLNIHRL 87
Query: 183 GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKA 242
G+E D F VLKV A L G ++H ++ GF +D +LVD Y K +
Sbjct: 88 GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG 147
Query: 243 RKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM 302
RK+F+ M R+ V+W ++++ Y + + E + F +M EG +P+ + + L ++
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 303 DL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII 359
+ G+Q+H V++ G++ + ++NSLI Y K G + AR LF+ + VV+WNS+I
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
Query: 360 SAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYL 397
S + + EAL +F M V+ + +F S++ CA L
Sbjct: 268 SGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 243/445 (54%), Gaps = 20/445 (4%)
Query: 80 GIRIDPEIYASLLETCY-RSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
G +D + L+ C R I+ Q+H + V + V Y+ G + +
Sbjct: 135 GFEVDGFTLSGLIAACCDRVDLIK---QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLRE 191
Query: 139 AHDLFDQMSQ-RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
A +F M + RD + WNS+I Y Q A+ALY +M+ +G + D+FT VL
Sbjct: 192 AVSVFYGMDELRDEVS--WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH---IVKARKIFNRMHRRDS 254
L L G + H ++AGF + + L+D Y KCG + + K+F + D
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 255 VSWNSMLTAY-VHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHG 310
V WN+M++ Y ++ L EA+ +F QM G +PD FV +++ + +SS QIHG
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369
Query: 311 WVIRRGVEWN-LSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---R 366
I+ + N +S+ N+LI Y K G L ARW+F+ MPE + VS+N +I + +H
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCM 426
EAL L+++M ++G+ P+KITFV++LSACA+ G V++G + M E +KI+P EH+ CM
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCM 489
Query: 427 VNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD 486
++L GRAG +E+A I D + + G W ALL +C H ++A+ E AAN+L ++P
Sbjct: 490 IDLLGRAGKLEEAERFI-DAMPYK-PGSVAWAALLGACRKHKNMALAERAANELMVMQPL 547
Query: 487 NEHNFALLMKIYENAGRLEDMERVR 511
+ +L +Y +A + E+M VR
Sbjct: 548 AATPYVMLANMYADARKWEEMASVR 572
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 213/437 (48%), Gaps = 51/437 (11%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQ 178
NV + +V+ YA + A LFD++ Q D ++ N+LISGYA A+ L+ +
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSY--NTLISGYADARETFAAMVLFKR 130
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
M + G E D FT ++ C +++ +++H +V GF + NA V Y K G
Sbjct: 131 MRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 239 IVKARKIFNRMHR-RDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
+ +A +F M RD VSWNSM+ AY H +A+ + +M+ +G K D +++++L
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 298 GVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLD---TARWLFNLMPERD 351
++S+D G Q HG +I+ G N + + LI YSK G D + +F + D
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 352 VVSWNSIISAHCKH----REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY 407
+V WN++IS + + EA+ F QM+ G +PD +FV + SAC+ L + +++
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 408 ALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII-------------------TDGIG 448
L + + + + +++LY ++G ++ A + G G
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 449 SEA-----------AGPTQ--WGALLYSCYLHGSVAIGEIAANKL---FDLEPDNEHNFA 492
+EA P + + A+L +C G V G+ N + F +EP+ EH ++
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH-YS 487
Query: 493 LLMKIYENAGRLEDMER 509
++ + AG+LE+ ER
Sbjct: 488 CMIDLLGRAGKLEEAER 504
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 166/350 (47%), Gaps = 19/350 (5%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVG 121
+H+ + L + I KG +ID AS+L + G Q H + +N
Sbjct: 217 QHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSH 276
Query: 122 VTSKLVRLYASFG---YMEDAHDLFDQMSQRDASAFPWNSLISGYA-QLGLYDDAIALYF 177
V S L+ Y+ G M D+ +F ++ D WN++ISGY+ L ++A+ +
Sbjct: 277 VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV--WNTMISGYSMNEELSEEAVKSFR 334
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NALVDMYPKC 236
QM G PD +F V C+ L +++H A+++ ++ + + NAL+ +Y K
Sbjct: 335 QMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKS 394
Query: 237 GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
G++ AR +F+RM ++VS+N M+ Y HG EA+ + +M+ G P+ ++ +L
Sbjct: 395 GNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVL 454
Query: 297 TGVS---SMDLGVQIHGWVIRR-GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER-D 351
+ + +D G + + +E + +I + G+L+ A + MP +
Sbjct: 455 SACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPG 514
Query: 352 VVSWNSIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVN 401
V+W +++ A C+ + +AL E+ +++ + L+A Y+ L N
Sbjct: 515 SVAWAALLGA-CRKHKNMALAER------AANELMVMQPLAATPYVMLAN 557
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQ 374
E N+ N ++ AY+K ++ AR LF+ +P+ D VS+N++IS + RE A+ LF++
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 375 MEEAGVKPDKITFVSLLSAC 394
M + G + D T L++AC
Sbjct: 131 MRKLGFEVDGFTLSGLIAAC 150
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/475 (31%), Positives = 261/475 (54%), Gaps = 25/475 (5%)
Query: 67 EQVLKDIEASIE---KGIRIDPEIYASLLETCYRSQAIRHGSQVHRL-IPTVLLRKNVGV 122
EQ+L+ +E E +G+ D +S+L C + +R G ++H + L +N V
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 123 TSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
S LV +Y + + +FD M R WN++I+GY+Q +A+ L+ M E
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGL--WNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 183 -GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
G+ + T V+ C G E +H V+ G D N L+DMY + G I
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 242 ARKIFNRMHRRDSVSWNSMLTAYV---HHG---LEVEAMDTFCQMVLEGC-----KPDFV 290
A +IF +M RD V+WN+M+T YV HH L + M + V +G KP+ +
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 291 SISTIL---TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
++ TIL +S++ G +IH + I+ + ++++ ++L+ Y+K G L +R +F+ +
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQI 578
Query: 348 PERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGV 404
P+++V++WN II A+ H +EA+ L M GVKP+++TF+S+ +AC++ G+V++G+
Sbjct: 579 PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGL 638
Query: 405 RLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSC 464
R++ +M Y ++P +H+ C+V+L GRAG +++AY ++ + + + W +LL +
Sbjct: 639 RIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM-NMMPRDFNKAGAWSSLLGAS 697
Query: 465 YLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+H ++ IGEIAA L LEP+ ++ LL IY +AG + VR + ++G+
Sbjct: 698 RIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 190/381 (49%), Gaps = 24/381 (6%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
W L+ + L +A+ Y M+ G++PD + FP +LK A L +E+G+++H H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 216 RAGFGNDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAM 274
+ G+G D + + N LV++Y KCG K+F+R+ R+ VSWNS++++ A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 275 DTFCQMVLEGCKPDFVSISTILTGVSSMD------LGVQIHGWVIRRGVEWNLSIANSLI 328
+ F M+ E +P ++ +++T S++ +G Q+H + +R+G E N I N+L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 243
Query: 329 IAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKI 385
Y K G+L +++ L RD+V+WN+++S+ C++ EAL +M GV+PD+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 386 TFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
T S+L AC++L ++ G L+A + + +V++Y V + D
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF-D 362
Query: 446 GIGSEAAGPTQWGALL--YSCYLHGSVA----IGEIAANKLFDLEPDNEHNFALLMKIYE 499
G+ G W A++ YS H A IG + L N A ++
Sbjct: 363 GMFDRKIG--LWNAMIAGYSQNEHDKEALLLFIGMEESAGLL----ANSTTMAGVVPACV 416
Query: 500 NAGRLEDMERVRMMLVDRGLD 520
+G E + +V RGLD
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLD 437
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 197/376 (52%), Gaps = 16/376 (4%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLR-KNVGVTSKLVRLYASFGYMED 138
GI+ D + +LL+ Q + G Q+H + +V V + LV LY G
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
+ +FD++S+R+ + WNSLIS ++ A+ + M++E VEP FT V+ C
Sbjct: 152 VYKVFDRISERNQVS--WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 209
Query: 199 AGLGLLE---VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
+ L + E +G++VH + +R G N + +N LV MY K G + ++ + RD V
Sbjct: 210 SNLPMPEGLMMGKQVHAYGLRKGELNSFI-INTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWV 312
+WN++L++ + +EA++ +MVLEG +PD +IS++L S +++ G ++H +
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 328
Query: 313 IRRG-VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REA 368
++ G ++ N + ++L+ Y ++ + R +F+ M +R + WN++I+ + ++ +EA
Sbjct: 329 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 388
Query: 369 LALFEQMEE-AGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
L LF MEE AG+ + T ++ AC G + ++ + ++ + + M
Sbjct: 389 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM- 447
Query: 428 NLYGRAGMVEKAYSII 443
++Y R G ++ A I
Sbjct: 448 DMYSRLGKIDIAMRIF 463
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 164/326 (50%), Gaps = 22/326 (6%)
Query: 58 YPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLR 117
Y Q +H E +L I G+ + A ++ C RS A +H + L
Sbjct: 379 YSQNEHDK-EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
++ V + L+ +Y+ G ++ A +F +M RD WN++I+GY ++DA+ L
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL--VTWNTMITGYVFSEHHEDALLLLH 495
Query: 178 QM------VEEG-----VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL 226
+M V +G ++P+ T +L CA L L G+E+H +A++ D
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555
Query: 227 NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCK 286
+ALVDMY KCG + +RK+F+++ +++ ++WN ++ AY HG EA+D M+++G K
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 287 PDFVSISTILTGVSS---MDLGVQIHGWVIR--RGVEWNLSIANSLIIAYSKHGRLDTAR 341
P+ V+ ++ S +D G++I +V++ GVE + ++ + GR+ A
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 342 WLFNLMPE--RDVVSWNSIISAHCKH 365
L N+MP +W+S++ A H
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIH 700
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/479 (31%), Positives = 257/479 (53%), Gaps = 47/479 (9%)
Query: 82 RIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVL-LRKNV--GVTSKLVRLYASFGYMED 138
R D Y L + C +R S H ++ VL LR + V + + ++AS G ME+
Sbjct: 153 RPDHFTYPVLFKVC---ADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMEN 209
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A +FD+ RD + WN LI+GY ++G + AI +Y M EGV+PD T ++ C
Sbjct: 210 ARKVFDESPVRDLVS--WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSC 267
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
+ LG L G+E + + G +NAL+DM+ KCG I +AR+IF+ + +R VSW
Sbjct: 268 SMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWT 327
Query: 259 SMLTAYVHHGL---------EVEAMDT----------------------FCQMVLEGCKP 287
+M++ Y GL ++E D F +M KP
Sbjct: 328 TMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKP 387
Query: 288 DFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLF 344
D +++ L+ S ++D+G+ IH ++ + + N+++ SL+ Y+K G + A +F
Sbjct: 388 DEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVF 447
Query: 345 NLMPERDVVSWNSIISA---HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVN 401
+ + R+ +++ +II H A++ F +M +AG+ PD+ITF+ LLSAC + G++
Sbjct: 448 HGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQ 507
Query: 402 DGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL 461
G ++ M ++ + P ++H+ MV+L GRAG++E+A ++ + + EA WGALL
Sbjct: 508 TGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM-ESMPMEADAAV-WGALL 565
Query: 462 YSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
+ C +HG+V +GE AA KL +L+P + + LL +Y A ED +R R M+ +RG++
Sbjct: 566 FGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVE 624
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 181/375 (48%), Gaps = 46/375 (12%)
Query: 154 FPWNSLISGYAQLGLYDDAIALYFQMVEEGV---EPDLFTFPRVLKVCAGLGLLEVGEEV 210
F WN I G+++ ++ LY QM+ G PD FT+P + KVCA L L +G +
Sbjct: 119 FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMI 178
Query: 211 HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
H ++ NA + M+ CG + ARK+F+ RD VSWN ++ Y G
Sbjct: 179 LGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA 238
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSL 327
+A+ + M EG KPD V++ +++ S ++ G + + +V G+ + + N+L
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298
Query: 328 -------------------------------IIAYSKHGRLDTARWLFNLMPERDVVSWN 356
I Y++ G LD +R LF+ M E+DVV WN
Sbjct: 299 MDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWN 358
Query: 357 SIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
++I + + +ALALF++M+ + KPD+IT + LSAC+ LG ++ G+ ++ + EK
Sbjct: 359 AMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI-EK 417
Query: 414 YKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIG 473
Y + + +V++Y + G + +A S+ G + + A++ LHG +
Sbjct: 418 YSLSLNVALGTSLVDMYAKCGNISEALSVFH---GIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 474 EIAANKLFD--LEPD 486
N++ D + PD
Sbjct: 475 ISYFNEMIDAGIAPD 489
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 144/326 (44%), Gaps = 56/326 (17%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+G++ D L+ +C + G + + + LR + + + L+ +++ G + +
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYD---------------------------- 170
A +FD + +R + W ++ISGYA+ GL D
Sbjct: 311 ARRIFDNLEKR--TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368
Query: 171 ---DAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG-NDGLGL 226
DA+AL+ +M +PD T L C+ LG L+VG +HR+ + N LG
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALG- 427
Query: 227 NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCK 286
+LVDMY KCG+I +A +F+ + R+S+++ +++ HG A+ F +M+ G
Sbjct: 428 TSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA 487
Query: 287 PDFVSISTILTGVSSMDLGVQIHGWVIRRGVEW------------NLSIANSLIIAYSKH 334
PD ++ +L+ HG +I+ G ++ L + ++ +
Sbjct: 488 PDEITFIGLLSACC--------HGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRA 539
Query: 335 GRLDTARWLFNLMP-ERDVVSWNSII 359
G L+ A L MP E D W +++
Sbjct: 540 GLLEEADRLMESMPMEADAAVWGALL 565
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 10/211 (4%)
Query: 244 KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC---KPDFVSISTILTGVS 300
KI + + SWN + + E+ + QM+ GC +PD + + +
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 301 SM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNS 357
+ LG I G V++ +E + N+ I ++ G ++ AR +F+ P RD+VSWN
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 358 IISAHCKHREA---LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKY 414
+I+ + K EA + +++ ME GVKPD +T + L+S+C+ LG +N G Y + E
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN- 286
Query: 415 KIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
++ + +++++ + G + +A I +
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEARRIFDN 317
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 240/451 (53%), Gaps = 17/451 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASF---GYM 136
G D +S+ C + + G Q+H L +V + LV +YA G +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSV 321
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQ-LGLYDDAIALYFQMVEEG-VEPDLFTFPRV 194
+D +FD+M D S W +LI+GY + L +AI L+ +M+ +G VEP+ FTF
Sbjct: 322 DDCRKVFDRM--EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
K C L VG++V A + G ++ N+++ M+ K + A++ F + ++
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGW 311
VS+N+ L + +A ++ + +++L+GV+ S+ G QIH
Sbjct: 440 VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHREA--- 368
V++ G+ N + N+LI YSK G +DTA +FN M R+V+SW S+I+ KH A
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRV 559
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
L F QM E GVKP+++T+V++LSAC+++GLV++G R + M E +KIKP MEH+ CMV+
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVD 619
Query: 429 LYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNE 488
L RAG++ A+ I A W L +C +H + +G++AA K+ +L+P+
Sbjct: 620 LLCRAGLLTDAFEFIN--TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 489 HNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ L IY AG+ E+ +R + +R L
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 200/405 (49%), Gaps = 21/405 (5%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGS-QVHRLIPTVLLRKNVGVTSKLVRLYASF-G 134
+E G+ + Y +++ C S + G + L+ T +V V L+ ++
Sbjct: 158 LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
Query: 135 YMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRV 194
E+A+ +FD+MS+ + W +I+ Q+G +AI + MV G E D FT V
Sbjct: 218 SFENAYKVFDKMSELNV--VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC---GHIVKARKIFNRMHR 251
CA L L +G+++H A+R+G +D +LVDMY KC G + RK+F+RM
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 252 RDSVSWNSMLTAYVHH-GLEVEAMDTFCQMVLEG-CKPDFVSISTILTGVSSMD---LGV 306
+SW +++T Y+ + L EA++ F +M+ +G +P+ + S+ ++ +G
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH- 365
Q+ G +RG+ N S+ANS+I + K R++ A+ F + E+++VS+N+ + C++
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 366 --REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH 423
+A L ++ E + TF SLLS A +G + G ++++ + K +
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQPVC 512
Query: 424 GCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
++++Y + G ++ A + E W +++ HG
Sbjct: 513 NALISMYSKCGSIDTASRVFN---FMENRNVISWTSMITGFAKHG 554
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 193/388 (49%), Gaps = 36/388 (9%)
Query: 40 TLSFPKPKSTPLLIHQQPYPQTKHQAIEQVL------KDIEASI-------EKGIR-IDP 85
+ SFP P P I QP + ++++ D+ ++ GIR +D
Sbjct: 5 SFSFPSPAKLP--IKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDS 62
Query: 86 EIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQ 145
++SLL++C R++ R G VH + + + + + L+ LY+ G A D+F+
Sbjct: 63 VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFET 122
Query: 146 M---SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
M +RD + W+++++ Y G DAI ++ + +E G+ P+ + + V++ C+
Sbjct: 123 MRRFGKRDVVS--WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 203 LLEVGEEVHRHAVRAG-FGNDGLGLNALVDMYPKC-GHIVKARKIFNRMHRRDSVSWNSM 260
+ VG ++ G F +D +L+DM+ K A K+F++M + V+W M
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIRRGV 317
+T + G EA+ F MVL G + D ++S++ + + ++ LG Q+H W IR G+
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 318 EWNLSIANSLIIAYSK---HGRLDTARWLFNLMPERDVVSWNSIISAHCKH----REALA 370
++ SL+ Y+K G +D R +F+ M + V+SW ++I+ + K+ EA+
Sbjct: 301 VDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 371 LFEQMEEAG-VKPDKITFVSLLSACAYL 397
LF +M G V+P+ TF S AC L
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNL 386
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 14/265 (5%)
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEEGVEP-DLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
+ LI + G A++ M +G+ P D TF +LK C +G+ VH +
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR---RDSVSWNSMLTAYVHHGLEVE 272
D + N+L+ +Y K G KA +F M R RD VSW++M+ Y ++G E++
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 273 AMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIRRG-VEWNLSIANSLI 328
A+ F + + G P+ + ++ S+ D +G G++++ G E ++ + SLI
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 329 IAYSK-HGRLDTARWLFNLMPERDVVSWNSIISAHCKH----REALALFEQMEEAGVKPD 383
+ K + A +F+ M E +VV+W +I+ C REA+ F M +G + D
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMIT-RCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 384 KITFVSLLSACAYLGLVNDGVRLYA 408
K T S+ SACA L ++ G +L++
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHS 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
EQ K + E+ + + +ASLL +IR G Q+H + + L N V +
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
L+ +Y+ G ++ A +F+ M R+ W S+I+G+A+ G + + QM+EEGV+
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRN--VISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 186 PDLFTFPRVLKVCAGLGLLEVG-----EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
P+ T+ +L C+ +GL+ G H ++ + +VD+ + G +
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEH----YACMVDLLCRAGLLT 628
Query: 241 KARKIFNRM-HRRDSVSWNSMLTA-YVHHGLEV 271
A + N M + D + W + L A VH E+
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGACRVHSNTEL 661
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/472 (31%), Positives = 251/472 (53%), Gaps = 54/472 (11%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
S+ C S ++ H + R + +L K+ + ++ Y GY + +L + M
Sbjct: 192 SVYSKCASSPSLLHSA---RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD- 247
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+ +N++ISGY G Y +A+ + +MV G+E D FT+P V++ CA GLL++G++
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 210 VHRHAVRA---GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV- 265
VH + +R F D N+LV +Y KCG +AR IF +M +D VSWN++L+ YV
Sbjct: 308 VHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS 363
Query: 266 ------------------------------HHGLEVEAMDTFCQMVLEGCKPDFVSISTI 295
+G E + F M EG +P + S
Sbjct: 364 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 296 LTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV 352
+ + + G Q H +++ G + +LS N+LI Y+K G ++ AR +F MP D
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 353 VSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYAL 409
VSWN++I+A +H EA+ ++E+M + G++PD+IT +++L+AC++ GLV+ G + +
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 410 MTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLH 467
M Y+I P +H+ +++L R+G A S+I S PT W ALL C +H
Sbjct: 544 METVYRIPPGADHYARLIDLLCRSGKFSDAESVIE----SLPFKPTAEIWEALLSGCRVH 599
Query: 468 GSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
G++ +G IAA+KLF L P+++ + LL ++ G+ E++ RVR ++ DRG+
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGV 651
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 202/498 (40%), Gaps = 118/498 (23%)
Query: 81 IRIDPEIYASLLETCY--RSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+R YA+ L C R +++ VH I T + + ++L+ +Y +
Sbjct: 8 VRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNY 67
Query: 139 AHDLFDQMSQRDASA-------------------------------FPWNSLISGYAQLG 167
A LFD++S+ D A +N++I+G++
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 168 LYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE----EVHRHAVRAGFGNDG 223
AI L+ +M EG +PD FTF VL AGL L+ E + H A+++G G
Sbjct: 128 DGYSAINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYIT 184
Query: 224 LGLNALVDMYPKCGH----IVKARKIFNRMHRRDSVSW---------------------- 257
NALV +Y KC + ARK+F+ + +D SW
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 258 ----------NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDL 304
N+M++ YV+ G EA++ +MV G + D + +++ ++ + L
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
G Q+H +V+RR +++ NSL+ Y K G+ D AR +F MP +D+VSWN+++S +
Sbjct: 305 GKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS 363
Query: 365 H----------------------------------REALALFEQMEEAGVKPDKITFVSL 390
E L LF M+ G +P F
Sbjct: 364 SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGA 423
Query: 391 LSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSE 450
+ +CA LG +G + +A + K + ++ +Y + G+VE+A +
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLL-KIGFDSSLSAGNALITMYAKCGVVEEARQVFRT---MP 479
Query: 451 AAGPTQWGALLYSCYLHG 468
W AL+ + HG
Sbjct: 480 CLDSVSWNALIAALGQHG 497
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 8/206 (3%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
E+ LK +G ++ +++C A +G Q H + + ++ + L
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNAL 458
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
+ +YA G +E+A +F M D+ + WN+LI+ Q G +A+ +Y +M+++G+ P
Sbjct: 459 ITMYAKCGVVEEARQVFRTMPCLDSVS--WNALIAALGQHGHGAEAVDVYEEMLKKGIRP 516
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVH---RHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
D T VL C+ GL++ G + R G D L+D+ + G A
Sbjct: 517 DRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA--RLIDLLCRSGKFSDAE 574
Query: 244 KIFNRMHRRDSVS-WNSMLTAYVHHG 268
+ + + + W ++L+ HG
Sbjct: 575 SVIESLPFKPTAEIWEALLSGCRVHG 600
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 233/430 (54%), Gaps = 10/430 (2%)
Query: 87 IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM 146
++ ++L + + + G Q+H + L V +++ LV +Y+ + +A +FD
Sbjct: 223 VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFD-- 280
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEV 206
S D ++ W+++++GY+Q G +A+ L+ +M G++P +T VL C+ + LE
Sbjct: 281 SSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEE 340
Query: 207 GEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVH 266
G+++H ++ GF ALVDMY K G + ARK F+ + RD W S+++ YV
Sbjct: 341 GKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQ 400
Query: 267 HGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSI 323
+ EA+ + +M G P+ +++++L SS ++LG Q+HG I+ G + I
Sbjct: 401 NSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPI 460
Query: 324 ANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA---HCKHREALALFEQMEEAGV 380
++L YSK G L+ +F P +DVVSWN++IS + + EAL LFE+M G+
Sbjct: 461 GSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGM 520
Query: 381 KPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAY 440
+PD +TFV+++SAC++ G V G + +M+++ + P ++H+ CMV+L RAG +++A
Sbjct: 521 EPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAK 580
Query: 441 SIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYEN 500
I + G W LL +C HG +G A KL L + L IY
Sbjct: 581 EFIES--ANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTA 638
Query: 501 AGRLEDMERV 510
GR+ D+ERV
Sbjct: 639 LGRMRDVERV 648
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 181/353 (51%), Gaps = 29/353 (8%)
Query: 103 HGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISG 162
HG + T + NV LV YA G + AH +F+ + +D WNSLI+G
Sbjct: 37 HGQIIRTGASTCIQHANV-----LVNFYAKCGKLAKAHSIFNAIICKDV--VSWNSLITG 89
Query: 163 YAQLGLYDDA---IALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF 219
Y+Q G + + L+ +M + + P+ +T + K + L VG + H V+
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149
Query: 220 GNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQ 279
D +LV MY K G + K+F M R++ +W++M++ Y G EA+ F
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
Query: 280 MVL---EGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSK 333
+ EG D+V + +L+ +++ + LG QIH I+ G+ ++++N+L+ YSK
Sbjct: 210 FLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268
Query: 334 HGRLDTARWLFNLMPERDVVSWNSIISAHCKHREAL---ALFEQMEEAGVKPDKITFVSL 390
L+ A +F+ +R+ ++W+++++ + ++ E+L LF +M AG+KP + T V +
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328
Query: 391 LSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH----GCMVNLYGRAGMVEKA 439
L+AC+ + + +G +L++ + +K E H +V++Y +AG + A
Sbjct: 329 LNACSDICYLEEGKQLHSFL-----LKLGFERHLFATTALVDMYAKAGCLADA 376
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 123/232 (53%), Gaps = 4/232 (1%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
GI+ +L C + G Q+H + + +++ T+ LV +YA G + DA
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
FD + +RD + W SLISGY Q ++A+ LY +M G+ P+ T VLK C+
Sbjct: 377 RKGFDCLQERDVAL--WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
L LE+G++VH H ++ GFG + +AL MY KCG + +F R +D VSWN+
Sbjct: 435 SLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNA 494
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGW 311
M++ H+G EA++ F +M+ EG +PD V+ I++ S G GW
Sbjct: 495 MISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK--GFVERGW 544
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 204 LEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTA 263
L G VH +R G N LV+ Y KCG + KA IFN + +D VSWNS++T
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 264 YVHHG---LEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIRRGV 317
Y +G M F +M + P+ +++ I SS+ +G Q H V++
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALA---L 371
++ + SL+ Y K G ++ +F MPER+ +W++++S + EA+ L
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
Query: 372 FEQMEEAGVKPDKI--TFVSLLSACAYLGL 399
F + +E G D + +S L+A Y+GL
Sbjct: 210 FLREKEEGSDSDYVFTAVLSSLAATIYVGL 239
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 252/463 (54%), Gaps = 17/463 (3%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
++VL+ + I + I+ D + ++ C + G V + +V V S +
Sbjct: 98 DEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSV 157
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
+ LY G M++A LF +M++RD W ++++G+AQ G A+ Y +M EG
Sbjct: 158 LNLYMKCGKMDEAEVLFGKMAKRDV--ICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGR 215
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF 246
D +L+ LG ++G VH + R G + + +LVDMY K G I A ++F
Sbjct: 216 DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF 275
Query: 247 NRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMD 303
+RM + +VSW S+++ + +GL +A + +M G +PD V++ +L V S+
Sbjct: 276 SRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLK 335
Query: 304 LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC 363
G +H ++++R V + A +L+ YSK G L ++R +F + +D+V WN++IS +
Sbjct: 336 TGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYG 394
Query: 364 KH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIM 420
H +E ++LF +M E+ ++PD TF SLLSA ++ GLV G +++M KYKI+P
Sbjct: 395 IHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSE 454
Query: 421 EHHGCMVNLYGRAGMVEKAYSIITDGIGSEA---AGPTQWGALLYSCYLHGSVAIGEIAA 477
+H+ C+++L RAG VE+A D I SE A P W ALL C H ++++G+IAA
Sbjct: 455 KHYVCLIDLLARAGRVEEAL----DMINSEKLDNALPI-WVALLSGCINHRNLSVGDIAA 509
Query: 478 NKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
NK+ L PD+ L+ + A + +++ +VR ++ + ++
Sbjct: 510 NKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAME 552
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 218/421 (51%), Gaps = 25/421 (5%)
Query: 98 SQAIRHGSQVHR-LIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPW 156
S+ RH +Q+H +I T L ++ L+ G + A +FD++ QR S +
Sbjct: 27 SKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVY-- 84
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVR 216
NS+I Y++ D+ + LY QM+ E ++PD TF +K C +LE GE V AV
Sbjct: 85 NSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVD 144
Query: 217 AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDT 276
G+ ND ++++++Y KCG + +A +F +M +RD + W +M+T + G ++A++
Sbjct: 145 FGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEF 204
Query: 277 FCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSK 333
+ +M EG D V + +L + +G +HG++ R G+ N+ + SL+ Y+K
Sbjct: 205 YREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAK 264
Query: 334 HGRLDTARWLFNLMPERDVVSWNSIISAHCKHREALALFE---QMEEAGVKPDKITFVSL 390
G ++ A +F+ M + VSW S+IS ++ A FE +M+ G +PD +T V +
Sbjct: 265 VGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGV 324
Query: 391 LSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSE 450
L AC+ +G + G ++ + +++ + + ++++Y + G + + I + +G +
Sbjct: 325 LVACSQVGSLKTGRLVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIF-EHVGRK 381
Query: 451 AAGPTQWGALLYSCY-LHGSVAIGEIAANKLF-----DLEPDNEHNFALLMKIYENAGRL 504
W ++ SCY +HG+ G+ + ++EPD+ FA L+ ++G +
Sbjct: 382 --DLVCWNTMI-SCYGIHGN---GQEVVSLFLKMTESNIEPDHA-TFASLLSALSHSGLV 434
Query: 505 E 505
E
Sbjct: 435 E 435
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 245/450 (54%), Gaps = 12/450 (2%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
+K + D ++++ C +G VH + ++ + S L+ LY+ G
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE--GVEPDLFTFPRVL 195
DA+ +F M ++D A W SLISG + G + +A+ ++ M ++ ++PD V
Sbjct: 426 DAYLVFKSMEEKDMVA--WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVT 483
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
CAGL L G +VH ++ G + ++L+D+Y KCG A K+F M + V
Sbjct: 484 NACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV 543
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWV 312
+WNSM++ Y + L ++D F M+ +G PD VSI+++L +SS + G +HG+
Sbjct: 544 AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYT 603
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---AL 369
+R G+ + + N+LI Y K G A +F M + +++WN +I + H + AL
Sbjct: 604 LRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITAL 663
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
+LF++M++AG PD +TF+SL+SAC + G V +G ++ M + Y I+P MEH+ MV+L
Sbjct: 664 SLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDL 723
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEH 489
GRAG++E+AYS I + E A + W LL + H +V +G ++A KL +EP+
Sbjct: 724 LGRAGLLEEAYSFIK-AMPIE-ADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGS 781
Query: 490 NFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ L+ +Y AG + ++ ++ ++GL
Sbjct: 782 TYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 211/454 (46%), Gaps = 24/454 (5%)
Query: 81 IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
+++ + L C +S+ G Q+H + + L + V + L+ +Y+ G + +A
Sbjct: 268 VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAE 327
Query: 141 DLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAG 200
+F + + WN++++ YA+ A+ L+ M ++ V PD FT V+ C+
Sbjct: 328 TVFSCVVDKRLEI--WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 201 LGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSM 260
LGL G+ VH + + +AL+ +Y KCG A +F M +D V+W S+
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSL 445
Query: 261 LTAYVHHGLEVEAMDTFCQMV--LEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIRR 315
++ +G EA+ F M + KPD S++ G+ ++ G+Q+HG +I+
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
G+ N+ + +SLI YSK G + A +F M ++V+WNS+IS + ++ ++ LF
Sbjct: 506 GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF 565
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
M G+ PD ++ S+L A + + G L+ T + I ++++Y +
Sbjct: 566 NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGY-TLRLGIPSDTHLKNALIDMYVK 624
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDL-----EPDN 487
G + A +I + W ++Y HG I A LFD E +
Sbjct: 625 CGFSKYAENIFKK---MQHKSLITWNLMIYGYGSHGDC----ITALSLFDEMKKAGESPD 677
Query: 488 EHNFALLMKIYENAGRLEDMERV-RMMLVDRGLD 520
+ F L+ ++G +E+ + + M D G++
Sbjct: 678 DVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 179/372 (48%), Gaps = 14/372 (3%)
Query: 102 RHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLIS 161
G Q+H + L + + + L+ +Y FG DA +F ++ + ++ WN +I
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK-SNVVLWNVMIV 245
Query: 162 GYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGN 221
G+ G+ + ++ LY V+ +F L C+ G ++H V+ G N
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 222 DGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMV 281
D +L+ MY KCG + +A +F+ + + WN+M+ AY + A+D F M
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 282 LEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLD 338
+ PD ++S +++ S + L G +H + +R ++ +I ++L+ YSK G
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 339 TARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQM--EEAGVKPDKITFVSLLSA 393
A +F M E+D+V+W S+IS CK+ +EAL +F M ++ +KPD S+ +A
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 394 CAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAG 453
CA L + G++++ M + + + +++LY + G+ E A + T
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSS-LIDLYSKCGLPEMALKVFTS---MSTEN 541
Query: 454 PTQWGALLYSCY 465
W +++ SCY
Sbjct: 542 MVAWNSMI-SCY 552
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 183/390 (46%), Gaps = 22/390 (5%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
+ SLL+ C + +G +H + + R + + + LV +Y G+++ A +FD S
Sbjct: 63 FPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 122
Query: 148 Q-------RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAG 200
Q RD + WNS+I GY + + + + + +M+ GV PD F+ V+ V
Sbjct: 123 QSQSGVSARDVTV--WNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 201 LGLL--EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS-W 257
G E G+++H +R D AL+DMY K G + A ++F + + +V W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIR 314
N M+ + G+ ++D + K S + L S + G QIH V++
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 315 RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALAL 371
G+ + + SL+ YSK G + A +F+ + ++ + WN++++A+ ++ AL L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 372 FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYG 431
F M + V PD T +++S C+ LGL N G ++A + ++ I+ ++ LY
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYS 419
Query: 432 RAGMVEKAYSIITDGIGSEAAGPTQWGALL 461
+ G AY + E WG+L+
Sbjct: 420 KCGCDPDAYLVFKS---MEEKDMVAWGSLI 446
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 148/311 (47%), Gaps = 30/311 (9%)
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEEGVEP---DLFTFPRVLKVCAGLGLLEVGEEVHRH 213
NS I Q G Y A+ LY + +G P +FTFP +LK C+ L L G+ +H
Sbjct: 28 NSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 214 AVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN-------RMHRRDSVSWNSMLTAYVH 266
V G+ D +LV+MY KCG + A ++F+ + RD WNSM+ Y
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 267 HGLEVEAMDTFCQMVLEGCKPDFVSISTILT-----GVSSMDLGVQIHGWVIRRGVEWNL 321
E + F +M++ G +PD S+S +++ G + G QIHG+++R ++ +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 322 SIANSLIIAYSKHG-RLDTARWLFNLMPERDVVSWNSII-----SAHCKHREALALFEQM 375
+ +LI Y K G +D R + + +VV WN +I S C+ +L L+
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICE--SSLDLYMLA 263
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGC--MVNLYGRA 433
+ VK +F L AC+ G +++ + K+ + + C ++++Y +
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSGFGRQIHC---DVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 434 GMVEKAYSIIT 444
GMV +A ++ +
Sbjct: 321 GMVGEAETVFS 331
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/440 (33%), Positives = 242/440 (55%), Gaps = 19/440 (4%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
S L +C + + G Q+H + + NV V++ L+ LYA GY+ + +F M +
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH 479
Query: 150 DASAFPWNSLISGYAQLGL-YDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
D WNS+I A+ +A+ + G + + TF VL + L E+G+
Sbjct: 480 DQ--VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM-HRRDSVSWNSMLTAYVHH 267
++H A++ ++ NAL+ Y KCG + KIF+RM RRD+V+WNSM++ Y+H+
Sbjct: 538 QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIA 324
L +A+D M+ G + D +T+L+ V++++ G+++H +R +E ++ +
Sbjct: 598 ELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657
Query: 325 NSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAG-V 380
++L+ YSK GRLD A FN MP R+ SWNS+IS + +H EAL LFE M+ G
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717
Query: 381 KPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAY 440
PD +TFV +LSAC++ GL+ +G + + M++ Y + P +EH CM ++ GRAG ++K
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK-- 775
Query: 441 SIITDGIGSEAAGPTQ--WGALLYS-CYLHGSVA-IGEIAANKLFDLEPDNEHNFALLMK 496
+ D I P W +L + C +G A +G+ AA LF LEP+N N+ LL
Sbjct: 776 --LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Query: 497 IYENAGRLEDMERVRMMLVD 516
+Y GR ED+ + R + D
Sbjct: 834 MYAAGGRWEDLVKARKKMKD 853
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 216/446 (48%), Gaps = 30/446 (6%)
Query: 81 IRIDPEIYASLLET-----CYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFG 134
I + PE Y LL + ++ G +VH +I T L+ VG+ + LV +YA G
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 135 YMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRV 194
+ DA +F M+ +D+ WNS+I+G Q G + +A+ Y M + P FT
Sbjct: 364 SIADARRVFYFMTDKDS--VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
L CA L ++G+++H +++ G + NAL+ +Y + G++ + RKIF+ M D
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 255 VSWNSMLTAYVHHGLEV-EAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHG 310
VSWNS++ A + EA+ F G K + ++ S++L+ VSS+ +LG QIHG
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE-RDVVSWNSIISAHCKHR--- 366
++ + + N+LI Y K G +D +F+ M E RD V+WNS+IS + +
Sbjct: 542 LALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLA 601
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH--- 423
+AL L M + G + D + ++LSA A + + G+ ++A ++ +E
Sbjct: 602 KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC-----SVRACLESDVVV 656
Query: 424 -GCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL--YSCYLHGSVAIGEIAANKL 480
+V++Y + G ++ A W +++ Y+ + G A+ KL
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNT---MPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 481 FDLEPDNEHNFALLMKIYENAGRLED 506
P + F ++ +AG LE+
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEE 739
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 164/345 (47%), Gaps = 21/345 (6%)
Query: 116 LRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIAL 175
L K+V + + L+ Y G A +FD+M R+ W ++SGY++ G + +A+
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC--VSWACIVSGYSRNGEHKEALVF 89
Query: 176 YFQMVEEGVEPDLFTFPRVLKVCAGLGLLEV--GEEVHRHAVRAGFGNDGLGLNALVDMY 233
MV+EG+ + + F VL+ C +G + + G ++H + + D + N L+ MY
Sbjct: 90 LRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY 149
Query: 234 PKC-GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
KC G + A F + ++SVSWNS+++ Y G + A F M +G +P +
Sbjct: 150 WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF 209
Query: 293 STILTGVSSMD-----LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
+++T S+ L QI + + G+ +L + + L+ A++K G L AR +FN M
Sbjct: 210 GSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Query: 348 PERDVVSWNSIISAHCKHR---EALALFEQMEEA-GVKPDKITFVSLLSACAYLGLVND- 402
R+ V+ N ++ + + EA LF M V P+ ++V LLS+ L +
Sbjct: 270 ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEV 327
Query: 403 ----GVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
G ++ + + ++ +VN+Y + G + A +
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
++ G R+D +YA++L + G +VH L +V V S LV +Y+ G +
Sbjct: 611 LQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 670
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRVL 195
+ A F+ M R+ ++ WNS+ISGYA+ G ++A+ L+ M +G PD TF VL
Sbjct: 671 DYALRFFNTMPVRN--SYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVL 728
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL-------NALVDMYPKCGHIVKARKIFNR 248
C+ GLLE G + H ++ +D GL + + D+ + G + K +
Sbjct: 729 SACSHAGLLEEGFK-HFESM-----SDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEK 782
Query: 249 MHRRDSV-SWNSMLTA 263
M + +V W ++L A
Sbjct: 783 MPMKPNVLIWRTVLGA 798
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 308 IHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK--- 364
H + + ++ ++ + N+LI AY + G +AR +F+ MP R+ VSW I+S + +
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 365 HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND--GVRLYALM 410
H+EAL M + G+ ++ FVS+L AC +G V G +++ LM
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLM 130
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/435 (32%), Positives = 241/435 (55%), Gaps = 16/435 (3%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
+L+ C R+ A+ H I + L +V + + L+ Y+ G++E A +FD M +R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLER- 125
Query: 151 ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA-GLGLLEVGEE 209
S WN++I Y + + +A+ ++ +M EG + FT VL C LE ++
Sbjct: 126 -SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC-KK 183
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
+H +V+ + AL+D+Y KCG I A ++F M + SV+W+SM+ YV +
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 270 EVEAMDTF---CQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANS 326
EA+ + +M LE + S+ + ++++ G Q+H + + G N+ +A+S
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 327 LIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPD 383
+ Y+K G L + +F+ + E+++ WN+IIS KH +E + LFE+M++ G+ P+
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363
Query: 384 KITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
++TF SLLS C + GLV +G R + LM Y + P + H+ CMV++ GRAG++ +AY +I
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 423
Query: 444 TDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENA 501
S PT WG+LL SC ++ ++ + E+AA KLF+LEP+N N LL IY
Sbjct: 424 K----SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAAN 479
Query: 502 GRLEDMERVRMMLVD 516
+ E++ + R +L D
Sbjct: 480 KQWEEIAKSRKLLRD 494
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 118/219 (53%), Gaps = 2/219 (0%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+G + +S+L C + ++H L + N+ V + L+ LYA G ++D
Sbjct: 156 EGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKD 215
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A +F+ M +D S+ W+S+++GY Q Y++A+ LY + +E + FT V+ C
Sbjct: 216 AVQVFESM--QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
+ L L G+++H ++GFG++ ++ VDMY KCG + ++ IF+ + ++ WN
Sbjct: 274 SNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWN 333
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
++++ + H E M F +M +G P+ V+ S++L+
Sbjct: 334 TIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 225/404 (55%), Gaps = 9/404 (2%)
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE 181
V + V YA G + A +F + R + WN+LI G+AQ ++ + QM
Sbjct: 432 VANAFVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 182 EGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
G+ PD FT +L C+ L L +G+EVH +R D +++ +Y CG +
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 242 ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS- 300
+ +F+ M + VSWN+++T Y+ +G A+ F QMVL G + +S+ + S
Sbjct: 550 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 609
Query: 301 --SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI 358
S+ LG + H + ++ +E + IA SLI Y+K+G + + +FN + E+ SWN++
Sbjct: 610 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 669
Query: 359 ISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYK 415
I + H +EA+ LFE+M+ G PD +TF+ +L+AC + GL+++G+R M +
Sbjct: 670 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG 729
Query: 416 IKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI 475
+KP ++H+ C++++ GRAG ++KA ++ + + SE A W +LL SC +H ++ +GE
Sbjct: 730 LKPNLKHYACVIDMLGRAGQLDKALRVVAEEM-SEEADVGIWKSLLSSCRIHQNLEMGEK 788
Query: 476 AANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
A KLF+LEP+ N+ LL +Y G+ ED+ +VR + + L
Sbjct: 789 VAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 832
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 182/345 (52%), Gaps = 17/345 (4%)
Query: 64 QAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIP-TVLLRKNVGV 122
+ +++ + D E+S + + + E LL+ + + I G ++H+L+ + LR + +
Sbjct: 64 RTVQEFVGDDESSSDAFLLV-REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL 122
Query: 123 TSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
++++ +YA G +D+ +FD + R + F WN++IS Y++ LYD+ + + +M+
Sbjct: 123 CTRIITMYAMCGSPDDSRFVFDAL--RSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 180
Query: 183 -GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
+ PD FT+P V+K CAG+ + +G VH V+ G D NALV Y G +
Sbjct: 181 TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240
Query: 242 ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCK----PDFVSISTILT 297
A ++F+ M R+ VSWNSM+ + +G E+ +M+ E PD ++ T+L
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 298 GVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
+ + LG +HGW ++ ++ L + N+L+ YSK G + A+ +F + ++VVS
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 355 WNSII---SAHCKHREALALFEQMEEAG--VKPDKITFVSLLSAC 394
WN+++ SA + QM G VK D++T ++ + C
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 201/419 (47%), Gaps = 26/419 (6%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
D ++L C R + I G VH + L K + + + L+ +Y+ G + +A +F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 144 DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE--EGVEPDLFTFPRVLKVCAGL 201
+ ++ + WN+++ G++ G + QM+ E V+ D T + VC
Sbjct: 351 KMNNNKNVVS--WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE 408
Query: 202 GLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSML 261
L +E+H ++++ F + L NA V Y KCG + A+++F+ + + SWN+++
Sbjct: 409 SFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI 468
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVE 318
+ ++D QM + G PD ++ ++L+ S S+ LG ++HG++IR +E
Sbjct: 469 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 528
Query: 319 WNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQM 375
+L + S++ Y G L T + LF+ M ++ +VSWN++I+ + ++ AL +F QM
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHG----CMVNLYG 431
G++ I+ + + AC+ L + G +A Y +K ++E ++++Y
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHA-----YALKHLLEDDAFIACSLIDMYA 643
Query: 432 RAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHN 490
+ G + ++ + G + W A++ +HG A KLF+ HN
Sbjct: 644 KNGSITQSSKVFN---GLKEKSTASWNAMIMGYGIHGLAK----EAIKLFEEMQRTGHN 695
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 157/333 (47%), Gaps = 30/333 (9%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G+ D SLL C + +++R G +VH I L +++ V ++ LY G +
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 550
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
LFD M D S WN++I+GY Q G D A+ ++ QMV G++ + V C+
Sbjct: 551 QALFDAM--EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
L L +G E H +A++ +D +L+DMY K G I ++ K+FN + + + SWN+
Sbjct: 609 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 668
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEW 319
M+ Y HGL EA+ F +M G PD ++ +LT + H +I G+ +
Sbjct: 669 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN--------HSGLIHEGLRY 720
Query: 320 ------------NLSIANSLIIAYSKHGRLDTARWLF--NLMPERDVVSWNSIISAHCKH 365
NL +I + G+LD A + + E DV W S++S+ C+
Sbjct: 721 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS-CRI 779
Query: 366 REALALFEQM-----EEAGVKPDKITFVSLLSA 393
+ L + E++ E KP+ +S L A
Sbjct: 780 HQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 230/444 (51%), Gaps = 15/444 (3%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I G ++ + S L C+ G +H L+ L N + + LV +Y G M
Sbjct: 337 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 396
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
++ + QM +RD A WN+LI GYA+ D A+A + M EGV + T VL
Sbjct: 397 SESRRVLLQMPRRDVVA--WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 454
Query: 197 VCAGLG-LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
C G LLE G+ +H + V AGF +D N+L+ MY KCG + ++ +FN + R+ +
Sbjct: 455 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 514
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWV 312
+WN+ML A HHG E + +M G D S S L+ + + + G Q+HG
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 574
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REAL 369
++ G E + I N+ YSK G + + R + SWN +ISA +H E
Sbjct: 575 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 634
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
A F +M E G+KP +TFVSLL+AC++ GLV+ G+ Y ++ + ++P +EH C+++L
Sbjct: 635 ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 694
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDN 487
GR+G + +A + I+ P W +LL SC +HG++ G AA L LEP++
Sbjct: 695 LGRSGRLAEAETFIS----KMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 750
Query: 488 EHNFALLMKIYENAGRLEDMERVR 511
+ + L ++ GR ED+E VR
Sbjct: 751 DSVYVLSSNMFATTGRWEDVENVR 774
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 194/398 (48%), Gaps = 23/398 (5%)
Query: 83 IDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
++ ++LL + G +H L+ + V V + L+R+YA G +A+ +
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
F QM +D WNSL++ + G DA+ L M+ G + TF L C
Sbjct: 302 FKQMPTKDL--ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 203 LLEVGEEVHRHAVRAG-FGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSML 261
E G +H V +G F N +G NALV MY K G + ++R++ +M RRD V+WN+++
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 418
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV----SSMDLGVQIHGWVIRRGV 317
Y +A+ F M +EG +++++ ++L+ ++ G +H +++ G
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 478
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQ 374
E + + NSLI Y+K G L +++ LFN + R++++WN++++A+ H E L L +
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Query: 375 MEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN----LY 430
M GV D+ +F LSA A L ++ +G +L+ L +K EH + N +Y
Sbjct: 539 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL-----AVKLGFEHDSFIFNAAADMY 593
Query: 431 GRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
+ G + + ++ + W L+ + HG
Sbjct: 594 SKCGEIGEVVKMLPPSVNRSLP---SWNILISALGRHG 628
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 203/411 (49%), Gaps = 17/411 (4%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
E+V+ + +G+ + + ++ +C + G Q+ + L + V + L
Sbjct: 125 EEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSL 184
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
+ + S G ++ A+ +FDQMS+RD WNS+ + YAQ G +++ ++ M E
Sbjct: 185 ISMLGSMGNVDYANYIFDQMSERDT--ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF 246
+ T +L V + + G +H V+ GF + N L+ MY G V+A +F
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 247 NRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL-- 304
+M +D +SWNS++ ++V+ G ++A+ C M+ G ++V+ ++ L + D
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 362
Query: 305 -GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC 363
G +HG V+ G+ +N I N+L+ Y K G + +R + MP RDVV+WN++I +
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 364 KHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLG-LVNDGVRLYA-LMTEKYKIKP 418
+ + ALA F+ M GV + IT VS+LSAC G L+ G L+A +++ ++
Sbjct: 423 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD- 481
Query: 419 IMEH-HGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
EH ++ +Y + G + + + G + W A+L + HG
Sbjct: 482 --EHVKNSLITMYAKCGDLSSSQDLFN---GLDNRNIITWNAMLAANAHHG 527
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 190/374 (50%), Gaps = 16/374 (4%)
Query: 80 GIRIDPEIYASLLETCYRSQAI-RHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
GI+ + ASL+ C RS ++ R G QVH + L +V V++ ++ LY +G +
Sbjct: 36 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 95
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
+ +F++M R+ + W SL+ GY+ G ++ I +Y M EGV + + V+ C
Sbjct: 96 SRKVFEEMPDRNVVS--WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 153
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
L +G ++ V++G + N+L+ M G++ A IF++M RD++SWN
Sbjct: 154 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 213
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIRR 315
S+ AY +G E+ F M + + ++ST+L+ + +D G IHG V++
Sbjct: 214 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 273
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALF 372
G + + + N+L+ Y+ GR A +F MP +D++SWNS++++ + +AL L
Sbjct: 274 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 333
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH---GCMVNL 429
M +G + +TF S L+AC G L+ L+ + + + +V++
Sbjct: 334 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV----VSGLFYNQIIGNALVSM 389
Query: 430 YGRAGMVEKAYSII 443
YG+ G + ++ ++
Sbjct: 390 YGKIGEMSESRRVL 403
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 130/249 (52%), Gaps = 7/249 (2%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG-LLEVGEEVHRHA 214
WN+++SG ++GLY + + + +M + G++P F ++ C G + G +VH
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 215 VRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAM 274
++G +D A++ +Y G + +RK+F M R+ VSW S++ Y G E +
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128
Query: 275 DTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAY 331
D + M EG + S+S +++ + LG QI G V++ G+E L++ NSLI
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 188
Query: 332 SKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFV 388
G +D A ++F+ M ERD +SWNSI +A+ ++ E+ +F M + + T
Sbjct: 189 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 248
Query: 389 SLLSACAYL 397
+LLS ++
Sbjct: 249 TLLSVLGHV 257
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 87/156 (55%), Gaps = 7/156 (4%)
Query: 249 MHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV----SSMDL 304
M R+ VSWN+M++ V GL +E M+ F +M G KP I++++T S
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
GVQ+HG+V + G+ ++ ++ +++ Y +G + +R +F MP+R+VVSW S++ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 365 H---REALALFEQMEEAGVKPDKITFVSLLSACAYL 397
E + +++ M GV ++ + ++S+C L
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLL 156
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 16/214 (7%)
Query: 63 HQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGV 122
H E+VLK + G+ +D ++ L + + G Q+H L + + +
Sbjct: 526 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 585
Query: 123 TSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
+ +Y+ G + + + R S WN LIS + G +++ A + +M+E
Sbjct: 586 FNAAADMYSKCGEIGEVVKMLPPSVNR--SLPSWNILISALGRHGYFEEVCATFHEMLEM 643
Query: 183 GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLN-------ALVDMYPK 235
G++P TF +L C+ GL++ G + R GL ++D+ +
Sbjct: 644 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR------DFGLEPAIEHCICVIDLLGR 697
Query: 236 CGHIVKARKIFNRMHRR-DSVSWNSMLTAYVHHG 268
G + +A ++M + + + W S+L + HG
Sbjct: 698 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHG 731
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 230/444 (51%), Gaps = 15/444 (3%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I G ++ + S L C+ G +H L+ L N + + LV +Y G M
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 413
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
++ + QM +RD A WN+LI GYA+ D A+A + M EGV + T VL
Sbjct: 414 SESRRVLLQMPRRDVVA--WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 471
Query: 197 VCAGLG-LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
C G LLE G+ +H + V AGF +D N+L+ MY KCG + ++ +FN + R+ +
Sbjct: 472 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 531
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWV 312
+WN+ML A HHG E + +M G D S S L+ + + + G Q+HG
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 591
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REAL 369
++ G E + I N+ YSK G + + R + SWN +ISA +H E
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 651
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
A F +M E G+KP +TFVSLL+AC++ GLV+ G+ Y ++ + ++P +EH C+++L
Sbjct: 652 ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 711
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDN 487
GR+G + +A + I+ P W +LL SC +HG++ G AA L LEP++
Sbjct: 712 LGRSGRLAEAETFIS----KMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 767
Query: 488 EHNFALLMKIYENAGRLEDMERVR 511
+ + L ++ GR ED+E VR
Sbjct: 768 DSVYVLSSNMFATTGRWEDVENVR 791
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 196/398 (49%), Gaps = 23/398 (5%)
Query: 83 IDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
++ ++LL + G +H L+ + V V + L+R+YA G +A+ +
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
F QM +D WNSL++ + G DA+ L M+ G + TF L C
Sbjct: 319 FKQMPTKDL--ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 376
Query: 203 LLEVGEEVHRHAVRAG-FGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSML 261
E G +H V +G F N +G NALV MY K G + ++R++ +M RRD V+WN+++
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 435
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV----SSMDLGVQIHGWVIRRGV 317
Y +A+ F M +EG +++++ ++L+ ++ G +H +++ G
Sbjct: 436 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 495
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQ 374
E + + NSLI Y+K G L +++ LFN + R++++WN++++A+ H E L L +
Sbjct: 496 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Query: 375 MEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN----LY 430
M GV D+ +F LSA A L ++ +G +L+ L +K EH + N +Y
Sbjct: 556 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL-----AVKLGFEHDSFIFNAAADMY 610
Query: 431 GRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
+ G + + ++ + P+ W L+ + HG
Sbjct: 611 SKCGEIGEVVKMLPPSVNRSL--PS-WNILISALGRHG 645
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 203/411 (49%), Gaps = 17/411 (4%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
E+V+ + +G+ + + ++ +C + G Q+ + L + V + L
Sbjct: 142 EEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSL 201
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
+ + S G ++ A+ +FDQMS+RD WNS+ + YAQ G +++ ++ M E
Sbjct: 202 ISMLGSMGNVDYANYIFDQMSERDT--ISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 259
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF 246
+ T +L V + + G +H V+ GF + N L+ MY G V+A +F
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 319
Query: 247 NRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL-- 304
+M +D +SWNS++ ++V+ G ++A+ C M+ G ++V+ ++ L + D
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 379
Query: 305 -GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC 363
G +HG V+ G+ +N I N+L+ Y K G + +R + MP RDVV+WN++I +
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 364 KHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLG-LVNDGVRLYA-LMTEKYKIKP 418
+ + ALA F+ M GV + IT VS+LSAC G L+ G L+A +++ ++
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD- 498
Query: 419 IMEH-HGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
EH ++ +Y + G + + + G + W A+L + HG
Sbjct: 499 --EHVKNSLITMYAKCGDLSSSQDLFN---GLDNRNIITWNAMLAANAHHG 544
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 190/374 (50%), Gaps = 16/374 (4%)
Query: 80 GIRIDPEIYASLLETCYRSQAI-RHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
GI+ + ASL+ C RS ++ R G QVH + L +V V++ ++ LY +G +
Sbjct: 53 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 112
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
+ +F++M R+ + W SL+ GY+ G ++ I +Y M EGV + + V+ C
Sbjct: 113 SRKVFEEMPDRNVVS--WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 170
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
L +G ++ V++G + N+L+ M G++ A IF++M RD++SWN
Sbjct: 171 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 230
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIRR 315
S+ AY +G E+ F M + + ++ST+L+ + +D G IHG V++
Sbjct: 231 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 290
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALF 372
G + + + N+L+ Y+ GR A +F MP +D++SWNS++++ + +AL L
Sbjct: 291 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 350
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH---GCMVNL 429
M +G + +TF S L+AC G L+ L+ + + + +V++
Sbjct: 351 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV----VSGLFYNQIIGNALVSM 406
Query: 430 YGRAGMVEKAYSII 443
YG+ G + ++ ++
Sbjct: 407 YGKIGEMSESRRVL 420
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 144/276 (52%), Gaps = 9/276 (3%)
Query: 129 LYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDL 188
+Y FG ++ A LFD M R+ + WN+++SG ++GLY + + + +M + G++P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVS--WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58
Query: 189 FTFPRVLKVCAGLG-LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN 247
F ++ C G + G +VH ++G +D A++ +Y G + +RK+F
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 248 RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DL 304
M R+ VSW S++ Y G E +D + M EG + S+S +++ + L
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
G QI G V++ G+E L++ NSLI G +D A ++F+ M ERD +SWNSI +A+ +
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 365 H---REALALFEQMEEAGVKPDKITFVSLLSACAYL 397
+ E+ +F M + + T +LLS ++
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 274
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 16/214 (7%)
Query: 63 HQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGV 122
H E+VLK + G+ +D ++ L + + G Q+H L + + +
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 602
Query: 123 TSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
+ +Y+ G + + + R S WN LIS + G +++ A + +M+E
Sbjct: 603 FNAAADMYSKCGEIGEVVKMLPPSVNR--SLPSWNILISALGRHGYFEEVCATFHEMLEM 660
Query: 183 GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLN-------ALVDMYPK 235
G++P TF +L C+ GL++ G + R GL ++D+ +
Sbjct: 661 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR------DFGLEPAIEHCICVIDLLGR 714
Query: 236 CGHIVKARKIFNRMHRR-DSVSWNSMLTAYVHHG 268
G + +A ++M + + + W S+L + HG
Sbjct: 715 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHG 748
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 231/434 (53%), Gaps = 11/434 (2%)
Query: 92 LETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDA 151
++ C + +G +H L L K+ V LV +YA G ME A +FD++ R++
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVH 211
W L+ GY + + L+ M + G+ D T ++K C + +VG+ VH
Sbjct: 176 --VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVH 233
Query: 212 RHAVRAGFGNDGLGLNA-LVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
++R F + L A ++DMY KC + ARK+F R+ V W ++++ +
Sbjct: 234 GVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA 293
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSL 327
VEA D F QM+ E P+ +++ IL SS+ G +HG++IR G+E + S
Sbjct: 294 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 353
Query: 328 IIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA---HCKHREALALFEQMEEAGVKPDK 384
I Y++ G + AR +F++MPER+V+SW+S+I+A + EAL F +M+ V P+
Sbjct: 354 IDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNS 413
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
+TFVSLLSAC++ G V +G + + MT Y + P EH+ CMV+L GRAG + +A S I
Sbjct: 414 VTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFID 473
Query: 445 DGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRL 504
+ A + WGALL +C +H V + A KL +EP+ + LL IY +AG
Sbjct: 474 NMPVKPMA--SAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMW 531
Query: 505 EDMERVRMMLVDRG 518
E + VR + +G
Sbjct: 532 EMVNCVRRKMGIKG 545
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 176/363 (48%), Gaps = 10/363 (2%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
+LL +++ + H QVH + V + S L Y ++ A F+++
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 150 DASAFPWNSLISGYAQ--LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
+ WN+++SGY++ Y D + LY +M D F +K C GLGLLE G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
+H A++ G D +LV+MY + G + A+K+F+ + R+SV W ++ Y+ +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRG-VEWNLSI 323
+ E FC M G D +++ ++ ++ +G +HG IRR ++ + +
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 324 ANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIIS--AHCKHR-EALALFEQMEEAGV 380
S+I Y K LD AR LF +R+VV W ++IS A C+ EA LF QM +
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 381 KPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAY 440
P++ T ++L +C+ LG + G ++ M + I+ + +++Y R G ++ A
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMI-RNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 441 SII 443
++
Sbjct: 368 TVF 370
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 160/324 (49%), Gaps = 13/324 (4%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRL-IPTVLLRKNVGVTSKLVRLYASFGYM 136
+ G+ +D L++ C A + G VH + I + ++ + + ++ +Y +
Sbjct: 203 DTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLL 262
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
++A LF+ + D + W +LISG+A+ +A L+ QM+ E + P+ T +L
Sbjct: 263 DNARKLFE--TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILV 320
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C+ LG L G+ VH + +R G D + + +DMY +CG+I AR +F+ M R+ +S
Sbjct: 321 SCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVIS 380
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRG 316
W+SM+ A+ +GL EA+D F +M + P+ V+ ++L+ S G GW
Sbjct: 381 WSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS--GNVKEGWKQFES 438
Query: 317 VEWNLSIA------NSLIIAYSKHGRLDTARWLFNLMPERDVVS-WNSIISAHCKHREAL 369
+ + + ++ + G + A+ + MP + + S W +++SA H+E
Sbjct: 439 MTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVD 498
Query: 370 ALFEQMEE-AGVKPDKITFVSLLS 392
E E+ ++P+K + LLS
Sbjct: 499 LAGEIAEKLLSMEPEKSSVYVLLS 522
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 227/443 (51%), Gaps = 12/443 (2%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
D +A L+ C + +++G +H + + V + L +Y G M+D LF
Sbjct: 208 DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLF 267
Query: 144 DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGL 203
+ MS+RD W SLI Y ++G A+ + +M V P+ TF + CA L
Sbjct: 268 ENMSERDV--VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 204 LEVGEEVHRHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
L GE++H + + G ND L + N+++ MY CG++V A +F M RD +SW++++
Sbjct: 326 LVWGEQLHCNVLSLGL-NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIG 384
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEW 319
Y G E F M G KP +++++L+ +M + G Q+H + G+E
Sbjct: 385 GYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ 444
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQME 376
N ++ +SLI YSK G + A +F D+VS ++I+ + +H +EA+ LFE+
Sbjct: 445 NSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 504
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
+ G +PD +TF+S+L+AC + G ++ G + +M E Y ++P EH+GCMV+L RAG +
Sbjct: 505 KVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRL 564
Query: 437 EKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMK 496
A +I + S W LL +C G + G AA ++ +L+P L
Sbjct: 565 SDAEKMINE--MSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLAN 622
Query: 497 IYENAGRLEDMERVRMMLVDRGL 519
IY + G LE+ VR + +G+
Sbjct: 623 IYSSTGNLEEAANVRKNMKAKGV 645
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 223/475 (46%), Gaps = 45/475 (9%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
++ + D + + +L+ C +S I +G +H L +V V S L+ +Y G +
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
+ + +F +M R+A W ++I+G G Y + + + +M D +TF LK
Sbjct: 160 DKSCRVFSEMPFRNA--VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALK 217
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
CAGL ++ G+ +H H + GF N+L MY +CG + +F M RD VS
Sbjct: 218 ACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS 277
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVI 313
W S++ AY G EV+A++TF +M P+ F S+ + +S + G Q+H V+
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL 337
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALA 370
G+ +LS++NS++ YS G L +A LF M RD++SW++II +C+ E
Sbjct: 338 SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFK 397
Query: 371 LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLY 430
F M ++G KP SLLS + ++ G +++AL + ++ ++N+Y
Sbjct: 398 YFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALAL-CFGLEQNSTVRSSLINMY 456
Query: 431 GRAGMVEKAYSII----TDGIGSEAA---GPTQWG------------------------- 458
+ G +++A I D I S A G + G
Sbjct: 457 SKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFI 516
Query: 459 ALLYSCYLHGSVAIGEIAANKL---FDLEPDNEHNFALLMKIYENAGRLEDMERV 510
++L +C G + +G N + +++ P EH + ++ + AGRL D E++
Sbjct: 517 SVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEH-YGCMVDLLCRAGRLSDAEKM 570
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 141/282 (50%), Gaps = 10/282 (3%)
Query: 134 GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM--VEEGVEPDLFTF 191
G + A +FD+M D W S+I Y D+A+ L+ M V+ V PD
Sbjct: 54 GNLRAARQVFDKMPHGDI--VSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 192 PRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR 251
VLK C + GE +H +AV+ + ++L+DMY + G I K+ ++F+ M
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 252 RDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQI 308
R++V+W +++T VH G E + F +M D + + L G+ + G I
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 309 HGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---H 365
H VI RG L +ANSL Y++ G + LF M ERDVVSW S+I A+ +
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 366 REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY 407
+A+ F +M + V P++ TF S+ SACA L + G +L+
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 155/315 (49%), Gaps = 17/315 (5%)
Query: 63 HQAIEQVLKDIEASIE-KGIRIDP--EIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKN 119
++ I Q +K +E I+ + ++ P + +AS+ C + G Q+H + ++ L +
Sbjct: 285 YKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS 344
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM 179
+ V++ ++++Y++ G + A LF M RD W+++I GY Q G ++ + M
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDI--ISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
+ G +P F +L V + ++E G +VH A+ G + ++L++MY KCG I
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 240 VKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTIL 296
+A IF R D VS +M+ Y HG EA+D F + + G +PD F+S+ T
Sbjct: 463 KEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTAC 522
Query: 297 TGVSSMDLGVQIHGWVIRRGVEWNLSIANS----LIIAYSKHGRLDTARWLFNLMP-ERD 351
T +DLG + +N+ A ++ + GRL A + N M ++D
Sbjct: 523 THSGQLDLGFHYFNMMQE---TYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKD 579
Query: 352 VVSWNSIISAHCKHR 366
V W +++ A CK +
Sbjct: 580 DVVWTTLLIA-CKAK 593
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 312 VIRRGVEWNL-SIANSLIIAYSKH---------GRLDTARWLFNLMPERDVVSWNSIISA 361
++++ VE N+ I+N +++ + + G L AR +F+ MP D+VSW SII
Sbjct: 21 LLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKR 80
Query: 362 HCKHR---EALALFEQME--EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKI 416
+ EAL LF M + V PD +L AC + G L+A + +
Sbjct: 81 YVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLL 140
Query: 417 KPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
+ ++++Y R G ++K+ + ++
Sbjct: 141 SSVYVGSS-LLDMYKRVGKIDKSCRVFSE 168
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 241/462 (52%), Gaps = 32/462 (6%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ G+ D + + C + + G Q++ L L +V V + + +Y +
Sbjct: 374 MSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL 433
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
+A +FD+M +RDA + WN++I+ + Q G + + L+ M+ +EPD FTF +LK
Sbjct: 434 AEAFRVFDEMRRRDAVS--WNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C G G L G E+H V++G ++ +L+DMY KCG I +A KI +R +R +VS
Sbjct: 492 ACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 257 --------------------WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
WNS+++ YV +A F +M+ G PD + +T+L
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Query: 297 ---TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVV 353
++S LG QIH VI++ ++ ++ I ++L+ YSK G L +R +F RD V
Sbjct: 611 DTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFV 670
Query: 354 SWNSIISA---HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
+WN++I H K EA+ LFE+M +KP+ +TF+S+L ACA++GL++ G+ + +M
Sbjct: 671 TWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMM 730
Query: 411 TEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLH-GS 469
Y + P + H+ MV++ G++G V++A +I + A W LL C +H +
Sbjct: 731 KRDYGLDPQLPHYSNMVDILGKSGKVKRALELIRE--MPFEADDVIWRTLLGVCTIHRNN 788
Query: 470 VAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVR 511
V + E A L L+P + + LL +Y +AG E + +R
Sbjct: 789 VEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLR 830
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 226/466 (48%), Gaps = 35/466 (7%)
Query: 83 IDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
+ IYAS+L +C +R G Q+H + V + + +YA M+DA L
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
FD + ++ N++I+GY+Q A+ L+ +++ G+ D + V + CA +
Sbjct: 339 FDNSENLNRQSY--NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 396
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
L G +++ A+++ D NA +DMY KC + +A ++F+ M RRD+VSWN+++
Sbjct: 397 GLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIA 456
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS--SMDLGVQIHGWVIRRGVEWN 320
A+ +G E + F M+ +PD + +IL + S+ G++IH +++ G+ N
Sbjct: 457 AHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASN 516
Query: 321 LSIANSLIIAYSKHGRLDTARWLFNLMPERD--------------------VVSWNSIIS 360
S+ SLI YSK G ++ A + + +R VSWNSIIS
Sbjct: 517 SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIIS 576
Query: 361 AHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIK 417
+ + +A LF +M E G+ PDK T+ ++L CA L G +++A + +K +++
Sbjct: 577 GYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQ 635
Query: 418 PIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL--YSCYLHGSVAIGEI 475
+ +V++Y + G + + + + + W A++ Y+ + G AI
Sbjct: 636 SDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF---VTWNAMICGYAHHGKGEEAIQLF 692
Query: 476 AANKLFDLEPDNEHNFALLMKIYENAGRLED-MERVRMMLVDRGLD 520
L +++P N F +++ + G ++ +E MM D GLD
Sbjct: 693 ERMILENIKP-NHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 191/395 (48%), Gaps = 24/395 (6%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I G R + LL+ S+ S V +P ++V +K++ Y+ M
Sbjct: 75 IISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPL----RDVVSWNKMINGYSKSNDM 130
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A+ F+ M RD + WNS++SGY Q G +I ++ M EG+E D TF +LK
Sbjct: 131 FKANSFFNMMPVRDVVS--WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
VC+ L +G ++H VR G D + +AL+DMY K V++ ++F + ++SVS
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQM--VLEGCKPD-FVSISTILTGVSSMDLGVQIHGWVI 313
W++++ V + L A+ F +M V G + S+ +S + LG Q+H +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALA 370
+ + + + + Y+K + A+ LF+ + S+N++I+ + + +AL
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 371 LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN-- 428
LF ++ +G+ D+I+ + ACA + +++G+++Y L IK + C+ N
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL-----AIKSSLSLDVCVANAA 423
Query: 429 --LYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL 461
+YG+ + +A+ + + +A W A++
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRRDA---VSWNAII 455
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 39/257 (15%)
Query: 190 TFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM 249
F V K CA G LE+G++ H H + +GF LN L+ +Y V A +F++M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 250 HRRDSVSW-------------------------------NSMLTAYVHHGLEVEAMDTFC 278
RD VSW NSML+ Y+ +G +++++ F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 279 QMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHG 335
M EG + D + + IL S ++ LG+QIHG V+R G + ++ A++L+ Y+K
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 336 RLDTARWLFNLMPERDVVSWNSIISAHCKHRE----ALALFEQMEEAGVKPDKITFVSLL 391
R + +F +PE++ VSW++II A C AL F++M++ + + S+L
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAII-AGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 392 SACAYLGLVNDGVRLYA 408
+CA L + G +L+A
Sbjct: 289 RSCAALSELRLGGQLHA 305
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 245/447 (54%), Gaps = 11/447 (2%)
Query: 82 RIDPE--IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
R+ P+ + LL+ C ++ G VH + + +V V + L+ LYA + A
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+F+ + + + W +++S YAQ G +A+ ++ QM + V+PD VL
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT 233
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
L L+ G +H V+ G + L +L MY KCG + A+ +F++M + + WN+
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRG 316
M++ Y +G EA+D F +M+ + +PD +SI++ ++ V S++ ++ +V R
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA---HCKHREALALFE 373
++ I+++LI ++K G ++ AR +F+ +RDVV W+++I H + REA++L+
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
ME GV P+ +TF+ LL AC + G+V +G + M + +KI P +H+ C+++L GRA
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRA 472
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFAL 493
G +++AY +I G T WGALL +C H V +GE AA +LF ++P N ++
Sbjct: 473 GHLDQAYEVIK--CMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQ 530
Query: 494 LMKIYENAGRLEDMERVRMMLVDRGLD 520
L +Y A + + VR+ + ++GL+
Sbjct: 531 LSNLYAAARLWDRVAEVRVRMKEKGLN 557
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 221/427 (51%), Gaps = 22/427 (5%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
GI D YASL+++ ++ Q+H + + L+ + + +KL+ +SFG + A
Sbjct: 17 GIHSD-SFYASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+FD + + FPWN++I GY++ + DA+ +Y M V PD FTFP +LK C+
Sbjct: 73 RQVFDDLPR--PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN--RMHRRDSVSW 257
GL L++G VH R GF D N L+ +Y KC + AR +F + R VSW
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIR 314
++++AY +G +EA++ F QM KPD+V++ ++L T + + G IH V++
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 315 RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALAL 371
G+E + SL Y+K G++ TA+ LF+ M +++ WN++IS + K+ REA+ +
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 372 FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM-TEKYKIKPIMEHHGCMVNLY 430
F +M V+PD I+ S +SACA +G + +Y + Y+ + +++++
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMF 368
Query: 431 GRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSV--AIGEIAANKLFDLEPDNE 488
+ G VE A + + + W A++ LHG AI A + + P++
Sbjct: 369 AKCGSVEGARLVFDRTLDRDV---VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 489 HNFALLM 495
LLM
Sbjct: 426 TFLGLLM 432
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 3/192 (1%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I K +R D S + C + ++ ++ + R +V ++S L+ ++A G +
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
E A +FD+ RD W+++I GY G +AI+LY M GV P+ TF +L
Sbjct: 375 EGARLVFDRTLDRDVVV--WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 432
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C G++ G ++D+ + GH+ +A ++ M + V+
Sbjct: 433 ACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVT 492
Query: 257 -WNSMLTAYVHH 267
W ++L+A H
Sbjct: 493 VWGALLSACKKH 504
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 238/435 (54%), Gaps = 11/435 (2%)
Query: 92 LETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDA 151
+ C R + G ++HR + V S LV +Y +E A ++F +M ++
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK-- 272
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVH 211
S WNS+I GY G + + +M+ EG P T +L C+ L G+ +H
Sbjct: 273 SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIH 332
Query: 212 RHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEV 271
+ +R+ D +L+D+Y KCG A +F++ + + SWN M+++Y+ G
Sbjct: 333 GYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWF 392
Query: 272 EAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLI 328
+A++ + QMV G KPD V+ +++L S +++ G QIH + +E + + ++L+
Sbjct: 393 KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALL 452
Query: 329 IAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKI 385
YSK G A +FN +P++DVVSW +ISA+ H REAL F++M++ G+KPD +
Sbjct: 453 DMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGV 512
Query: 386 TFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
T +++LSAC + GL+++G++ ++ M KY I+PI+EH+ CM+++ GRAG + +AY II
Sbjct: 513 TLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Query: 446 GIGSEAAGPTQWGALLYS-CYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRL 504
E + + + L+S C LH ++G+ A L + PD+ + +L +Y +
Sbjct: 573 --TPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESW 630
Query: 505 EDMERVRMMLVDRGL 519
+ RVR+ + + GL
Sbjct: 631 DAARRVRLKMKEMGL 645
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 212/399 (53%), Gaps = 14/399 (3%)
Query: 104 GSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGY 163
G +H L+ +V V S LV +YA F E++ +FD+M +RD ++ WN++IS +
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVAS--WNTVISCF 183
Query: 164 AQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDG 223
Q G + A+ L+ +M G EP+ + + C+ L LE G+E+HR V+ GF D
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 224 LGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE 283
+ALVDMY KC + AR++F +M R+ V+WNSM+ YV G ++ +M++E
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 284 GCKPDFVSISTILTGVS-SMDL--GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTA 340
G +P ++++IL S S +L G IHG+VIR V ++ + SLI Y K G + A
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA 363
Query: 341 RWLFNLMPERDVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYL 397
+F+ + SWN +IS++ +A+ +++QM GVKPD +TF S+L AC+ L
Sbjct: 364 ETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 398 GLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQW 457
+ G +++ ++E +++ ++++Y + G ++A+ I + W
Sbjct: 424 AALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV---VSW 479
Query: 458 GALLYSCYLHGS--VAIGEIAANKLFDLEPDNEHNFALL 494
++ + HG A+ + + F L+PD A+L
Sbjct: 480 TVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 170/314 (54%), Gaps = 9/314 (2%)
Query: 90 SLLETCYRS-QAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQ 148
SLL C S +++R VH+ I T+ LR++V + L+ +Y + A +F+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 149 RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGV-EPDLFTFPRVLKVCAGLGLLEVG 207
R + + WNSL+SGY++ ++ D + ++ +++ + PD FTFP V+K LG +G
Sbjct: 68 R-SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
+H V++G+ D + ++LV MY K + ++F+ M RD SWN++++ +
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIA 324
G +A++ F +M G +P+ VS++ ++ S ++ G +IH +++G E + +
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 325 NSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVK 381
++L+ Y K L+ AR +F MP + +V+WNS+I + + + + +M G +
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 382 PDKITFVSLLSACA 395
P + T S+L AC+
Sbjct: 307 PSQTTLTSILMACS 320
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 154/297 (51%), Gaps = 8/297 (2%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I +G R S+L C RS+ + HG +H + ++ ++ V L+ LY G
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A +F + +Q+D A WN +IS Y +G + A+ +Y QMV GV+PD+ TF VL
Sbjct: 361 NLAETVFSK-TQKDV-AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C+ L LE G+++H + D L L+AL+DMY KCG+ +A +IFN + ++D VS
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVI 313
W M++AY HG EA+ F +M G KPD V++ +L+ +D G++ +
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 314 RR-GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER--DVVSWNSIISAHCKHRE 367
+ G+E + + +I + GRL A + PE + +++ SA C H E
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLE 595
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 224/385 (58%), Gaps = 10/385 (2%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+E+ +K + + E + +D +++ +L+ C +A GS+V+ + + + V + +
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV-EEGV 184
+ ++ FG + DA +F +MS+R+ F WN L+ GYA+ G +D+A+ LY +M+ GV
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERN--LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 185 EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARK 244
+PD++TFP VL+ C G+ L G+EVH H VR G+ D +NAL+ MY KCG + AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 245 IFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD- 303
+F+RM RRD +SWN+M++ Y +G+ E ++ F M PD ++++++++ +
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 304 --LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA 361
LG IH +VI G ++S+ NSL Y G A LF+ M +D+VSW ++IS
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 362 HCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKP 418
+ + +A+ + M++ VKPD+IT ++LSACA LG ++ GV L+ L + I
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 419 IMEHHGCMVNLYGRAGMVEKAYSII 443
++ + ++N+Y + ++KA I
Sbjct: 433 VIVANN-LINMYSKCKCIDKALDIF 456
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 244/448 (54%), Gaps = 13/448 (2%)
Query: 79 KGIRIDPEI--YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+G+ +DP++ S++ C R G +H + T ++ V + L ++Y + G
Sbjct: 289 RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSW 348
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
+A LF +M ++D + W ++ISGY L D AI Y M ++ V+PD T VL
Sbjct: 349 REAEKLFSRMERKDIVS--WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLS 406
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
CA LG L+ G E+H+ A++A + + N L++MY KC I KA IF+ + R++ +S
Sbjct: 407 ACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS 466
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQM--VLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIR 314
W S++ + EA+ QM L+ + + ++ G +IH V+R
Sbjct: 467 WTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLR 526
Query: 315 RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHREA---LAL 371
GV + + N+L+ Y + GR++TA FN ++DV SWN +++ + + + + L
Sbjct: 527 TGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVEL 585
Query: 372 FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYG 431
F++M ++ V+PD+ITF+SLL C+ +V G+ ++ M E Y + P ++H+ C+V+L G
Sbjct: 586 FDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLG 644
Query: 432 RAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNF 491
RAG +++A+ I P WGALL +C +H + +GE++A +F+L+ + +
Sbjct: 645 RAGELQEAHKFIQKM--PVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYY 702
Query: 492 ALLMKIYENAGRLEDMERVRMMLVDRGL 519
LL +Y + G+ ++ +VR M+ + GL
Sbjct: 703 ILLCNLYADCGKWREVAKVRRMMKENGL 730
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 218/412 (52%), Gaps = 24/412 (5%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G++ D + +L TC + G +VH + ++ V + L+ +Y G ++ A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
LFD+M +RD WN++ISGY + G+ + + L+F M V+PDL T V+ C
Sbjct: 251 RLLFDRMPRRDI--ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
LG +G ++H + + GF D N+L MY G +A K+F+RM R+D VSW +
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRG 316
M++ Y ++ L +A+DT+ M + KPD ++++ +L+ ++ +D GV++H I+
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA---HCKHREALALFE 373
+ + +AN+LI YSK +D A +F+ +P ++V+SW SII+ + + EAL
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA-LMTEKYKIKPIMEHHGCMVNLYGR 432
QM+ ++P+ IT + L+ACA +G + G ++A ++ + + + ++++Y R
Sbjct: 489 QMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYVR 545
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQWGALL--YSCYLHGSVAIGEIAANKLFD 482
G + A+S S+ T W LL YS GS+ + +LFD
Sbjct: 546 CGRMNTAWS----QFNSQKKDVTSWNILLTGYSERGQGSMVV------ELFD 587
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 163/358 (45%), Gaps = 22/358 (6%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
+ ++ D A++L C + G ++H+L L V V + L+ +Y+ ++
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
A D+F + +++ W S+I+G +A+ ++ + ++ ++P+ T L
Sbjct: 451 KALDIFHNIPRKN--VISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAA 507
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
CA +G L G+E+H H +R G G D NAL+DMY +CG + A FN ++D SW
Sbjct: 508 CARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSW 566
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIR 314
N +LT Y G ++ F +MV +PD ++ ++L G S + G+ +
Sbjct: 567 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED 626
Query: 315 RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISAHCKHREALALFE 373
GV NL ++ + G L A MP D W ++++A C+ + L E
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA-CRIHHKIDLGE 685
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA---LMTEKYKIKPIMEHHGCMVN 428
+ + DK S Y+ L N LYA E K++ +M+ +G V+
Sbjct: 686 LSAQHIFELDK------KSVGYYILLCN----LYADCGKWREVAKVRRMMKENGLTVD 733
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/551 (27%), Positives = 276/551 (50%), Gaps = 75/551 (13%)
Query: 41 LSFPKPKSTPLLIHQQPYPQTKHQA-IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQ 99
+ P+ P+ + Q + +A + Q + +E+ ++GIR+ ++ ASLL+ C ++
Sbjct: 1 MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTK 60
Query: 100 AIRHGSQVHR-LIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAF---- 154
+++ G +HR L T R N +++ L+ +Y G DA +FDQM R+ ++
Sbjct: 61 SLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMV 120
Query: 155 -------------------------PWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLF 189
WN+++ GYAQ G +A+ Y + G++ + F
Sbjct: 121 SGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 190 TFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM 249
+F +L C L++ + H + AGF ++ + +++D Y KCG + A++ F+ M
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 250 HRRD-------------------------------SVSWNSMLTAYVHHGLEVEAMDTFC 278
+D VSW +++ YV G A+D F
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 279 QMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHG 335
+M+ G KP+ + S+ L ++S+ G +IHG++IR V N + +SLI YSK G
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Query: 336 RLDTARWLFNLMPER-DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLL 391
L+ + +F + ++ D V WN++ISA +H +AL + + M + V+P++ T V +L
Sbjct: 361 SLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Query: 392 SACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEA 451
+AC++ GLV +G+R + MT ++ I P EH+ C+++L GRAG + + I
Sbjct: 421 NACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG----CFKELMRKIEEMP 476
Query: 452 AGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMER 509
P + W A+L C +HG+ +G+ AA++L L+P++ + LL IY + G+ E +E+
Sbjct: 477 FEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEK 536
Query: 510 VRMMLVDRGLD 520
+R ++ R ++
Sbjct: 537 LRGVMKKRRVN 547
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 239/449 (53%), Gaps = 8/449 (1%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ G D + +L++C G Q+H + V + L+ +Y G +
Sbjct: 45 LRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLV 104
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
DA +F++ Q + +N+LISGY DA ++ +M E GV D T ++
Sbjct: 105 ADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVP 164
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
+C L +G +H V+ G ++ LN+ + MY KCG + R++F+ M + ++
Sbjct: 165 LCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLIT 224
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVI 313
WN++++ Y +GL + ++ + QM G PD ++ ++L+ + + +G ++ V
Sbjct: 225 WNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVE 284
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALA 370
G N+ ++N+ I Y++ G L AR +F++MP + +VSW ++I + H L
Sbjct: 285 SNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLM 344
Query: 371 LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLY 430
LF+ M + G++PD FV +LSAC++ GL + G+ L+ M +YK++P EH+ C+V+L
Sbjct: 345 LFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLL 404
Query: 431 GRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHN 490
GRAG +++A I + + E G WGALL +C +H +V + E+A K+ + EP+N
Sbjct: 405 GRAGRLDEAMEFI-ESMPVEPDGAV-WGALLGACKIHKNVDMAELAFAKVIEFEPNNIGY 462
Query: 491 FALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ L+ IY ++ E + R+R+M+ +R
Sbjct: 463 YVLMSNIYSDSKNQEGIWRIRVMMRERAF 491
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 197/410 (48%), Gaps = 54/410 (13%)
Query: 155 PWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHA 214
PWN + A L+ ++I+LY M+ G PD F+FP +LK CA L L G+++H H
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 215 VRAGFGNDGLGLNALVDMYPKCGHIVKARKIF--NRMHRRDSVSWNSMLTAYVHHGLEVE 272
+ G + L AL+ MY KCG + ARK+F N + SV +N++++ Y + +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 273 AMDTFCQMVLEGCKPDFVS---ISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLII 329
A F +M G D V+ + + T + LG +HG ++ G++ +++ NS I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 330 AYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKIT 386
Y K G ++ R LF+ MP + +++WN++IS + ++ + L L+EQM+ +GV PD T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 387 FVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDG 446
VS+LS+CA+LG G + L+ E P + +++Y R G + KA ++
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLV-ESNGFVPNVFVSNASISMYARCGNLAKARAVFDI- 317
Query: 447 IGSEAAGPTQWGALLYSCY-LHGSVAIGEI------------------------------ 475
W A++ CY +HG IG +
Sbjct: 318 --MPVKSLVSWTAMI-GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 476 --------AANKLFDLEPDNEHNFALLMKIYENAGRL-EDMERVRMMLVD 516
A + + LEP EH ++ L+ + AGRL E ME + M V+
Sbjct: 375 DKGLELFRAMKREYKLEPGPEH-YSCLVDLLGRAGRLDEAMEFIESMPVE 423
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 168/364 (46%), Gaps = 25/364 (6%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E G+ +D L+ C + + G +H L V V + + +Y G +E
Sbjct: 149 ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVE 208
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
LFD+M + WN++ISGY+Q GL D + LY QM GV PD FT VL
Sbjct: 209 AGRRLFDEMPVK--GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSS 266
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
CA LG ++G EV + GF + NA + MY +CG++ KAR +F+ M + VSW
Sbjct: 267 CAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSW 326
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIR 314
+M+ Y HG+ + F M+ G +PD +L+ S D G+++ + R
Sbjct: 327 TAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 386
Query: 315 RGVEWNLSIA----NSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISAHCKHREA- 368
E+ L + L+ + GRLD A MP E D W +++ A H+
Sbjct: 387 ---EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVD 443
Query: 369 ---LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGV-RLYALMTEK-YKIKP---IM 420
LA + +E +P+ I + L+S +G+ R+ +M E+ ++ KP +
Sbjct: 444 MAELAFAKVIE---FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Query: 421 EHHG 424
EH G
Sbjct: 501 EHKG 504
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 4/201 (1%)
Query: 69 VLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVR 128
VL+ E G+ DP S+L +C A + G +V +L+ + NV V++ +
Sbjct: 241 VLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASIS 300
Query: 129 LYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDL 188
+YA G + A +FD M + S W ++I Y G+ + + L+ M++ G+ PD
Sbjct: 301 MYARCGNLAKARAVFDIMPVK--SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 189 FTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG-LNALVDMYPKCGHIVKARKIFN 247
F VL C+ GL + G E+ R R G + LVD+ + G + +A +
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 248 RMH-RRDSVSWNSMLTAYVHH 267
M D W ++L A H
Sbjct: 419 SMPVEPDGAVWGALLGACKIH 439
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHG 310
S WN L + L E++ + M+ G PD S IL +S+ L G Q+H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS--WNSIIS---AHCKH 365
V + G E + +LI Y K G + AR +F P+ +S +N++IS A+ K
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 366 REALALFEQMEEAGVKPDKITFVSLLSACA 395
+A +F +M+E GV D +T + L+ C
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCT 167
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 232/450 (51%), Gaps = 11/450 (2%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ G + +Y +LL++ +A+ G Q+H + L N + + +V +Y G++
Sbjct: 176 LASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWL 235
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A +FDQM+ + A L+ GY Q G DA+ L+ +V EGVE D F F VLK
Sbjct: 236 VGAKRVFDQMAVKKPVA--CTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLK 293
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
CA L L +G+++H + G ++ LVD Y KC A + F + + VS
Sbjct: 294 ACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVS 353
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKP----DFVSISTILTGVSSMDLGVQIHGWV 312
W+++++ Y EA+ TF + + + SI + ++ ++G Q+H
Sbjct: 354 WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADA 413
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REAL 369
I+R + + ++LI YSK G LD A +F M D+V+W + IS H + EAL
Sbjct: 414 IKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEAL 473
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
LFE+M G+KP+ +TF+++L+AC++ GLV G M KY + P ++H+ CM+++
Sbjct: 474 RLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDI 533
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEH 489
Y R+G++++A + + A W L C+ H ++ +GEIA +L L+P++
Sbjct: 534 YARSGLLDEALKFMKNMPFEPDA--MSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTA 591
Query: 490 NFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ L +Y AG+ E+ + ++ +R L
Sbjct: 592 GYVLPFNLYTWAGKWEEAAEMMKLMNERML 621
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 198/392 (50%), Gaps = 14/392 (3%)
Query: 61 TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
+KH+ + + + ++ + G+ + Y L E C +++ HG +H + + +V
Sbjct: 59 SKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSV 118
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
+ + ++++Y +EDA LFD+MS+ +A + ++IS YA+ G+ D A+ L+ M+
Sbjct: 119 LLQNCVLQMYCECRSLEDADKLFDEMSELNAVS--RTTMISAYAEQGILDKAVGLFSGML 176
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
G +P + +LK L+ G ++H H +RAG ++ +V+MY KCG +V
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
A+++F++M + V+ ++ Y G +A+ F +V EG + D S +L +
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 301 SMD---LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNS 357
S++ LG QIH V + G+E +S+ L+ Y K ++A F + E + VSW++
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSA 356
Query: 358 IISAHC---KHREALALFEQMEEAGVKP-DKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
IIS +C + EA+ F+ + + T+ S+ AC+ L N G +++A +
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHA---DA 413
Query: 414 YKIKPIMEHHG--CMVNLYGRAGMVEKAYSII 443
K I +G ++ +Y + G ++ A +
Sbjct: 414 IKRSLIGSQYGESALITMYSKCGCLDDANEVF 445
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 230/415 (55%), Gaps = 41/415 (9%)
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
+A FD M+ RD + WN++I+GYAQ G D+A Q+ +E D+FT+ ++
Sbjct: 237 EARQFFDSMNVRDVVS--WNTIITGYAQSGKIDEAR----QLFDESPVQDVFTWTAMVSG 290
Query: 198 CAGLGLLEVGEE----------VHRHAVRAGF-----------------GNDGLGLNALV 230
++E E V +A+ AG+ + N ++
Sbjct: 291 YIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMI 350
Query: 231 DMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFV 290
Y +CG I +A+ +F++M +RD VSW +M+ Y G EA+ F QM EG + +
Sbjct: 351 TGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRS 410
Query: 291 SISTILT---GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
S S+ L+ V +++LG Q+HG +++ G E + N+L++ Y K G ++ A LF M
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 348 PERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGV 404
+D+VSWN++I+ + +H AL FE M+ G+KPD T V++LSAC++ GLV+ G
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 405 RLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSC 464
+ + MT+ Y + P +H+ CMV+L GRAG++E A++++ + A WG LL +
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI--WGTLLGAS 588
Query: 465 YLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+HG+ + E AA+K+F +EP+N + LL +Y ++GR D+ ++R+ + D+G+
Sbjct: 589 RVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 128/253 (50%), Gaps = 7/253 (2%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
+NV + ++ YA G + +A +LFD+M +RD + W ++I+GY+Q G +A+ L+
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS--WAAMIAGYSQSGHSFEALRLFV 398
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCG 237
QM EG + +F L CA + LE+G+++H V+ G+ NAL+ MY KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 238 HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
I +A +F M +D VSWN+M+ Y HG A+ F M EG KPD ++ +L+
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 298 GVSS---MDLGVQ-IHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDV 352
S +D G Q + GV N ++ + G L+ A L MP E D
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 353 VSWNSIISAHCKH 365
W +++ A H
Sbjct: 579 AIWGTLLGASRVH 591
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 193/435 (44%), Gaps = 84/435 (19%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAF-----------------------------PW 156
++ Y G E A LFD+M +RD ++ W
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW 160
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEE------GVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
N+++SGYAQ G DDA +++ +M E+ + ++ + C E V
Sbjct: 161 NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV 220
Query: 211 HRHAVRAGFGN-----------------DGLGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
+ + GF D + N ++ Y + G I +AR++F+ +D
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHG 310
+W +M++ Y+ + + EA + F +M + + VS + +L G M++ ++
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---E 367
+ R N+S N++I Y++ G++ A+ LF+ MP+RD VSW ++I+ + + E
Sbjct: 337 VMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA-LMTEKYKIKPIMEHHGCM 426
AL LF QME G + ++ +F S LS CA + + G +L+ L+ Y+ GC
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET-------GCF 445
Query: 427 VN-----LYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL--YSCYLHGSVAIGEIAANK 479
V +Y + G +E+A + + G + W ++ YS + G VA+ + K
Sbjct: 446 VGNALLLMYCKCGSIEEANDLFKEMAGKDI---VSWNTMIAGYSRHGFGEVALRFFESMK 502
Query: 480 LFDLEPDNEHNFALL 494
L+PD+ A+L
Sbjct: 503 REGLKPDDATMVAVL 517
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 6/213 (2%)
Query: 58 YPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLR 117
Y Q+ H + E + ++ E G R++ ++S L TC A+ G Q+H +
Sbjct: 384 YSQSGH-SFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
V + L+ +Y G +E+A+DLF +M+ +D + WN++I+GY++ G + A+ +
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS--WNTMIAGYSRHGFGEVALRFFE 499
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE-VHRHAVRAGFGNDGLGLNALVDMYPKC 236
M EG++PD T VL C+ GL++ G + + G + +VD+ +
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559
Query: 237 GHIVKARKIFNRM-HRRDSVSWNSMLTAYVHHG 268
G + A + M D+ W ++L A HG
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 34/277 (12%)
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC-AGL--GLLEV 206
D+ WN IS Y + G ++A+ ++ +M PR V G+ G L
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRM------------PRWSSVSYNGMISGYLRN 108
Query: 207 GE-EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
GE E+ R D + N ++ Y + ++ KAR++F M RD SWN+ML+ Y
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYA 168
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLS 322
+G +A F +M + + VS + +L+ S M+ + + W L
Sbjct: 169 QNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACML----FKSRENWALV 220
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQMEEAG 379
N L+ + K ++ AR F+ M RDVVSWN+II+ + K EA LF +E+
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF---DESP 277
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKI 416
V+ D T+ +++S +V + L+ M E+ ++
Sbjct: 278 VQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV 313
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EA 368
V +R W+ N +I Y ++G + AR LF+ MPERD+VSWN +I + ++R +A
Sbjct: 86 VFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKA 145
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
LFE M E D ++ ++LS A G V+D ++ M EK + +++
Sbjct: 146 RELFEIMPE----RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVS-----WNALLS 196
Query: 429 LYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIA-ANKLFD 482
Y + +E+A + W + ++C L G V +I A + FD
Sbjct: 197 AYVQNSKMEEACMLFK--------SRENWALVSWNCLLGGFVKKKKIVEARQFFD 243
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 210/408 (51%), Gaps = 11/408 (2%)
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM 179
V V + + Y G ++ A +F+ + + D + WNS+ Y+ G DA LY M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
+ E +PDL TF + C L G +H HA+ G D +N + MY K
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 240 VKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV 299
AR +F+ M R VSW M++ Y G EA+ F M+ G KPD V++ ++++G
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 300 SSMDLGVQIHGWVIRRGVEW-----NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
++ W+ R + N+ I N+LI YSK G + AR +F+ PE+ VV+
Sbjct: 368 GKFG-SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVT 426
Query: 355 WNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
W ++I+ + + EAL LF +M + KP+ ITF+++L ACA+ G + G + +M
Sbjct: 427 WTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVA 471
+ Y I P ++H+ CMV+L GR G +E+A +I + AG WGALL +C +H +V
Sbjct: 487 QVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGI--WGALLNACKIHRNVK 544
Query: 472 IGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
I E AA LF+LEP + + IY AG + R+R ++ R +
Sbjct: 545 IAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNI 592
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 199/432 (46%), Gaps = 34/432 (7%)
Query: 93 ETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDAS 152
+ C R + VH + +V V + V ++ ++ A +F++M +RDA+
Sbjct: 60 KACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDAT 119
Query: 153 AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHR 212
WN+++SG+ Q G D A +L+ +M + PD T +++ + L++ E +H
Sbjct: 120 T--WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHA 177
Query: 213 HAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR--RDSVSWNSMLTAYVHHGLE 270
+R G N + Y KCG + A+ +F + R R VSWNSM AY G
Sbjct: 178 VGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA 237
Query: 271 VEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSL 327
+A +C M+ E KPD F++++ ++ G IH I G + ++ N+
Sbjct: 238 FDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTF 297
Query: 328 IIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDK 384
I YSK +AR LF++M R VSW +IS + + EALALF M ++G KPD
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDL 357
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGC----------MVNLYGRAG 434
+T +SL+S C G +L T K+ I + +GC ++++Y + G
Sbjct: 358 VTLLSLISGCGKFG---------SLETGKW-IDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 435 MVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEH-NFAL 493
+ +A I + + W ++ L+G +K+ DL+ H F
Sbjct: 408 SIHEARDIFDN---TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLA 464
Query: 494 LMKIYENAGRLE 505
+++ ++G LE
Sbjct: 465 VLQACAHSGSLE 476
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 8/232 (3%)
Query: 171 DAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALV 230
+++ L+ +M G EP+ FTFP V K CA L + E VH H +++ F +D A V
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 231 DMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFV 290
DM+ KC + A K+F RM RD+ +WN+ML+ + G +A F +M L PD V
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 291 SISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
++ T++ S S+ L +H IR GV+ +++AN+ I Y K G LD+A+ +F +
Sbjct: 155 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI 214
Query: 348 P--ERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSAC 394
+R VVSWNS+ A+ E A L+ M KPD TF++L ++C
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC 266
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 251/465 (53%), Gaps = 15/465 (3%)
Query: 63 HQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGV 122
+QA+E + + AS + D +L+ C + R G VH + ++ +
Sbjct: 144 YQAVEFFRRMVMAS---DVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSL 200
Query: 123 TSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
+ L+ YA ++A +LF ++++D W+++I+ Y Q G +A+ ++ M+++
Sbjct: 201 VNSLLNCYAKSRAFKEAVNLFKMIAEKDV--ISWSTVIACYVQNGAAAEALLVFNDMMDD 258
Query: 183 GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKA 242
G EP++ T VL+ CA LE G + H A+R G + ALVDMY KC +A
Sbjct: 259 GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEA 318
Query: 243 RKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE-GCKPDFVSISTILTGVSS 301
+F+R+ R+D VSW ++++ + +G+ +++ F M+LE +PD + + +L S
Sbjct: 319 YAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 378
Query: 302 MDLGVQ---IHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI 358
+ Q H +VI+ G + N I SL+ YS+ G L A +FN + +D V W S+
Sbjct: 379 LGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 438
Query: 359 ISA---HCKHREALALFEQM-EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKY 414
I+ H K +AL F M + + VKP+++TF+S+LSAC++ GL+++G+R++ LM Y
Sbjct: 439 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDY 498
Query: 415 KIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGE 474
++ P +EH+ +V+L GR G ++ A I S P G LL +C +H + + E
Sbjct: 499 RLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPT--PQILGTLLGACRIHQNGEMAE 556
Query: 475 IAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
A KLF+LE ++ + L+ +Y G E++E++R + RG+
Sbjct: 557 TVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGI 601
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 206/382 (53%), Gaps = 15/382 (3%)
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
DA +F +M++R S + WN+L+ ++ +++ + + M + +PD FT P LK
Sbjct: 12 DARQMFGEMTKR--SLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKA 69
Query: 198 CAGLGLLEVGEEVHRHAVR-AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C L + GE +H + G+D ++L+ MY KCG +++A ++F+ + + D V+
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEG-CKPDFVSISTIL---TGVSSMDLGVQIHGWV 312
W+SM++ + +G +A++ F +MV+ PD V++ T++ T +S+ LG +HG+V
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REAL 369
IRRG +LS+ NSL+ Y+K A LF ++ E+DV+SW+++I+ + ++ EAL
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
+F M + G +P+ T + +L ACA + G + + L K ++ ++ +V++
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDM 308
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEH 489
Y + E+AY++ + + W AL+ L+G +A I + LE +
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDV---VSWVALISGFTLNG-MAHRSIEEFSIMLLENNTRP 364
Query: 490 NFALLMKIYENAGRLEDMERVR 511
+ L++K+ + L +E+ +
Sbjct: 365 DAILMVKVLGSCSELGFLEQAK 386
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 143/444 (32%), Positives = 240/444 (54%), Gaps = 17/444 (3%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+E +R + S++ +C G QVH L K V++ + +Y+SF
Sbjct: 283 LEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDF 339
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
AH +F+ + ++D WN++IS Y Q L A+++Y +M GV+PD FTF +L
Sbjct: 340 GAAHKVFESLEEKDL--VTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLA 397
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
L +LE+ V ++ G + NAL+ Y K G I KA +F R R++ +S
Sbjct: 398 TSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLIS 454
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCK--PDFVSISTILT---GVSSMDLGVQIHGW 311
WN++++ + H+G E ++ F ++ + PD ++ST+L+ SS+ LG Q H +
Sbjct: 455 WNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAY 514
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---A 368
V+R G I N+LI YS+ G + + +FN M E+DVVSWNS+ISA+ +H E A
Sbjct: 515 VLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENA 574
Query: 369 LALFEQMEEAG-VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
+ ++ M++ G V PD TF ++LSAC++ GLV +G+ ++ M E + + ++H C+V
Sbjct: 575 VNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLV 634
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDN 487
+L GRAG +++A S++ + + W AL +C HG + +G++ A L + E D+
Sbjct: 635 DLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDD 694
Query: 488 EHNFALLMKIYENAGRLEDMERVR 511
+ L IY AG ++ E R
Sbjct: 695 PSVYVQLSNIYAGAGMWKEAEETR 718
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 172/318 (54%), Gaps = 14/318 (4%)
Query: 129 LYASF--GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
L ASF G +E A ++FD+M +RD A WN++I+G + G ++ ++ L+ +M + GV
Sbjct: 130 LSASFKLGDIEYAFEVFDKMPERDDVAI-WNAMITGCKESGYHETSVELFREMHKLGVRH 188
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF 246
D F F +L +C G L+ G++VH ++AGF +NAL+ MY C +V A +F
Sbjct: 189 DKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVF 247
Query: 247 NR--MHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL 304
+ RD V++N ++ + E++ F +M+ +P ++ +++ S +
Sbjct: 248 EETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM 306
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
G Q+HG I+ G E ++N+ + YS A +F + E+D+V+WN++IS++ +
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 365 H---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIME 421
+ A++++++M GVKPD+ TF SLL+ L D + + K+ + +E
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL----DVLEMVQACIIKFGLSSKIE 422
Query: 422 HHGCMVNLYGRAGMVEKA 439
+++ Y + G +EKA
Sbjct: 423 ISNALISAYSKNGQIEKA 440
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 207/438 (47%), Gaps = 24/438 (5%)
Query: 80 GIRIDPEIYASLLETC-YRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
G+R D +A++L C Y S + G QVH L+ V + L+ +Y + + D
Sbjct: 185 GVRHDKFGFATILSMCDYGS--LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVD 242
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A +F++ +N +I G A D+++ ++ +M+E + P TF V+ C
Sbjct: 243 ACLVFEETDVAVRDQVTFNVVIDGLAGFK-RDESLLVFRKMLEASLRPTDLTFVSVMGSC 301
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
+ + G +VH A++ G+ L NA + MY A K+F + +D V+WN
Sbjct: 302 SCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWN 358
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVE 318
+M+++Y L AM + +M + G KPD + ++L +D+ + +I+ G+
Sbjct: 359 TMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLS 418
Query: 319 WNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALFEQM 375
+ I+N+LI AYSK+G+++ A LF ++++SWN+IIS + E L F +
Sbjct: 419 SKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCL 478
Query: 376 EEAGVK--PDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
E+ V+ PD T +LLS C + G + +A + + K + + ++N+Y +
Sbjct: 479 LESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNA-LINMYSQC 537
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD-----NE 488
G ++ + + W +L+ + HG GE A N ++ + +
Sbjct: 538 GTIQNSLEVFNQ---MSEKDVVSWNSLISAYSRHGE---GENAVNTYKTMQDEGKVIPDA 591
Query: 489 HNFALLMKIYENAGRLED 506
F+ ++ +AG +E+
Sbjct: 592 ATFSAVLSACSHAGLVEE 609
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 40/192 (20%)
Query: 258 NSMLTAYVHHGLEVEAMDTFCQM-VLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVI 313
N LT G A+ F + +PD S+S +T + G Q+H + I
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH----------- 362
R G+ + ++N+L+ Y + G L + + F+ + E DV SW +++SA
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 363 --------------------CK----HREALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
CK H ++ LF +M + GV+ DK F ++LS C Y G
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY-G 203
Query: 399 LVNDGVRLYALM 410
++ G ++++L+
Sbjct: 204 SLDFGKQVHSLV 215
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 235/438 (53%), Gaps = 15/438 (3%)
Query: 86 EIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS--FGYMEDAHDLF 143
+ +L+ C + +R ++H + L+ + + + L+R A G + A LF
Sbjct: 6 RVIVRMLQGCNSMKKLR---KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLF 62
Query: 144 DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGV-EPDLFTFPRVLKVCAGLG 202
D D S WN LI G++ ++I Y +M+ V PDLFTF LK C +
Sbjct: 63 DHFDS-DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIK 121
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
+ E+H +R+GF +D + +LV Y G + A K+F+ M RD VSWN M+
Sbjct: 122 SIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMIC 181
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEW 319
+ H GL +A+ + +M EG D ++ +L+ VS++++GV +H E
Sbjct: 182 CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCES 241
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALFEQME 376
+ ++N+LI Y+K G L+ A +FN M +RDV++WNS+I + H EA++ F +M
Sbjct: 242 CVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMV 301
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
+GV+P+ ITF+ LL C++ GLV +GV + +M+ ++ + P ++H+GCMV+LYGRAG +
Sbjct: 302 ASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQL 361
Query: 437 EKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMK 496
E + +I E P W LL SC +H ++ +GE+A KL LE N ++ L+
Sbjct: 362 ENSLEMIYASSCHE--DPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTS 419
Query: 497 IYENAGRLEDMERVRMML 514
IY A + +R ++
Sbjct: 420 IYSAANDAQAFASMRKLI 437
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
+G+ D +LL +C A+ G +HR+ + V V++ L+ +YA G +E
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
+A +F+ M +RD WNS+I GY G +AI+ + +MV GV P+ TF +L
Sbjct: 261 NAIGVFNGMRKRD--VLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLG 318
Query: 198 CAGLGLLEVGEEVHRHAVRAGF--GNDGLGLNALVDMYPKCGHIVKARK-IFNRMHRRDS 254
C+ GL++ G E H + + F + +VD+Y + G + + + I+ D
Sbjct: 319 CSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDP 377
Query: 255 VSWNSML-TAYVHHGLEV 271
V W ++L + +H LE+
Sbjct: 378 VLWRTLLGSCKIHRNLEL 395
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 229/414 (55%), Gaps = 12/414 (2%)
Query: 106 QVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQ 165
++H ++ + + ++L+ G M A +FD+M + F WN+L GY +
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHK--PRIFLWNTLFKGYVR 86
Query: 166 LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG 225
L +++ LY +M + GV PD FT+P V+K + LG G +H H V+ GFG G+
Sbjct: 87 NQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 226 LNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
LV MY K G + A +F M +D V+WN+ L V G A++ F +M +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 286 KPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW 342
+ D ++ ++L+ + S+++G +I+ + ++ N+ + N+ + + K G + AR
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 343 LFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGL 399
LF M +R+VVSW+++I + + REAL LF M+ G++P+ +TF+ +LSAC++ GL
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 400 VNDGVRLYALMTEK--YKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQW 457
VN+G R ++LM + ++P EH+ CMV+L GR+G++E+AY I G W
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI--W 384
Query: 458 GALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVR 511
GALL +C +H + +G+ A+ L + PD LL IY AG+ + +++VR
Sbjct: 385 GALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVR 438
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 6/206 (2%)
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
+++H +R GF L L++ G + AR++F+ MH+ WN++ YV +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIA 324
L E++ + +M G +PD + ++ +S + G +H V++ G +A
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 325 NSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVK 381
L++ Y K G L +A +LF M +D+V+WN+ ++ + AL F +M V+
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 382 PDKITFVSLLSACAYLGLVNDGVRLY 407
D T VS+LSAC LG + G +Y
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIY 233
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 234/452 (51%), Gaps = 42/452 (9%)
Query: 106 QVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQ 165
QVH + +V V + ++ Y +E A +FD+MS+RD WNS+ISGY+Q
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV--VSWNSMISGYSQ 210
Query: 166 LGLYDDAIALYFQMVE-EGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGL 224
G ++D +Y M+ +P+ T V + C L G EVH+ + D
Sbjct: 211 SGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS 270
Query: 225 GLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAM---------- 274
NA++ Y KCG + AR +F+ M +DSV++ ++++ Y+ HGL EAM
Sbjct: 271 LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 275 ---------------------DTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHG 310
++F +M+ G +P+ V++S++L T S++ G +IH
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE--- 367
+ IR G + N+ + S+I Y+K G L A+ +F+ +R +++W +II+A+ H +
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDS 450
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
A +LF+QM+ G KPD +T ++LSA A+ G + ++ M KY I+P +EH+ CMV
Sbjct: 451 ACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMV 510
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDN 487
++ RAG + A I+ A WGALL + G + I A ++LF++EP+N
Sbjct: 511 SVLSRAGKLSDAMEFISKMPIDPIA--KVWGALLNGASVLGDLEIARFACDRLFEMEPEN 568
Query: 488 EHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
N+ ++ +Y AGR E+ E VR + GL
Sbjct: 569 TGNYTIMANLYTQAGRWEEAEMVRNKMKRIGL 600
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 228/518 (44%), Gaps = 89/518 (17%)
Query: 83 IDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
+D Y L++ R + H Q+H I ++ + + SKL+ Y A +
Sbjct: 20 VDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHV 79
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV------EEGVEPDLFTFPRVLK 196
FD+++ R+A F +N+L+ Y +Y DA +L+ + + PD + VLK
Sbjct: 80 FDEITVRNA--FSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLK 137
Query: 197 V---CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
C L + +VH +R GF +D N ++ Y KC +I ARK+F+ M RD
Sbjct: 138 ALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERD 197
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMV-LEGCKPDFVSISTILTGV---SSMDLGVQIH 309
VSWNSM++ Y G + + M+ KP+ V++ ++ S + G+++H
Sbjct: 198 VVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH 257
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---R 366
+I ++ +LS+ N++I Y+K G LD AR LF+ M E+D V++ +IIS + H +
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317
Query: 367 EALALFEQMEEAGV-------------------------------KPDKITFVSLLSACA 395
EA+ALF +ME G+ +P+ +T SLL +
Sbjct: 318 EAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLT 377
Query: 396 YLGLVNDGVRLYALMTEK------YKIKPIMEHHGCMVNLYGRAGMVEK----------- 438
Y + G ++A Y I++++ + L G + +
Sbjct: 378 YSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTA 437
Query: 439 ---AYSIITDG------------IGSEAAGPTQWGALLYSCYLH-GSVAIGEIAANKL-- 480
AY++ D +G++ T L S + H G + + + +
Sbjct: 438 IITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVL--SAFAHSGDSDMAQHIFDSMLT 495
Query: 481 -FDLEPDNEHNFALLMKIYENAGRLED-MERVRMMLVD 516
+D+EP EH +A ++ + AG+L D ME + M +D
Sbjct: 496 KYDIEPGVEH-YACMVSVLSRAGKLSDAMEFISKMPID 532
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Query: 60 QTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKN 119
Q H E+V+ I G R + +SLL + S ++ G ++H N
Sbjct: 343 QNNHH--EEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN 400
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM 179
+ VT+ ++ YA G++ A +FD +D S W ++I+ YA G D A +L+ QM
Sbjct: 401 IYVTTSIIDNYAKLGFLLGAQRVFDNC--KDRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
G +PD T VL A G ++ + +
Sbjct: 459 QCLGTKPDDVTLTAVLSAFAHSGDSDMAQHI 489
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 233/424 (54%), Gaps = 23/424 (5%)
Query: 101 IRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLI 160
I +++ +IP + N+ TS ++ G +++A ++FD+MS+R S W +++
Sbjct: 157 IDDACKLYEMIPD---KDNIARTS-MIHGLCKEGRVDEAREIFDEMSER--SVITWTTMV 210
Query: 161 SGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG 220
+GY Q DDA + F ++ E E ++ +L G +E EE+
Sbjct: 211 TGYGQNNRVDDARKI-FDVMPEKTE---VSWTSMLMGYVQNGRIEDAEELFEVMPVKPV- 265
Query: 221 NDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQM 280
+ NA++ + G I KAR++F+ M R+ SW +++ + +G E+EA+D F M
Sbjct: 266 ---IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 281 VLEGCKPDF---VSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRL 337
+G +P F +SI ++ ++S+ G Q+H ++R + ++ +A+ L+ Y K G L
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
Query: 338 DTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAG-VKPDKITFVSLLSA 393
++ +F+ P +D++ WNSIIS + H EAL +F +M +G KP+++TFV+ LSA
Sbjct: 383 VKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Query: 394 CAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAG 453
C+Y G+V +G+++Y M + +KPI H+ CMV++ GRAG +A +I D + E
Sbjct: 443 CSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI-DSMTVEPDA 501
Query: 454 PTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMM 513
WG+LL +C H + + E A KL ++EP+N + LL +Y + GR D+ +R +
Sbjct: 502 AV-WGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKL 560
Query: 514 LVDR 517
+ R
Sbjct: 561 MKTR 564
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 22/348 (6%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
+ S+L ++ I ++ ++P K V + ++ G + A +FD M
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPV----KPVIACNAMISGLGQKGEIAKARRVFDSMK 292
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
+R+ ++ W ++I + + G +A+ L+ M ++GV P T +L VCA L L G
Sbjct: 293 ERNDAS--WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
++VH VR F D + L+ MY KCG +VK++ IF+R +D + WNS+++ Y H
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 268 GLEVEAMDTFCQMVLEG-CKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIA-- 324
GL EA+ FC+M L G KP+ V+ L+ S G+ G I +E +
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYA--GMVEEGLKIYESMESVFGVKPI 468
Query: 325 ----NSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISAHCKHRE-ALALFEQMEEA 378
++ + GR + A + + M E D W S++ A H + +A F +
Sbjct: 469 TAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLI 528
Query: 379 GVKPDKI-TFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGC 425
++P+ T++ L + A G D L LM K + + + GC
Sbjct: 529 EIEPENSGTYILLSNMYASQGRWADVAELRKLM----KTRLVRKSPGC 572
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 203/473 (42%), Gaps = 94/473 (19%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
K++ + +V Y + DA LFD+M R+ WN L+SGY + G D+A ++
Sbjct: 46 KSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI--ISWNGLVSGYMKNGEIDEARKVFD 103
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE----------EVHRHAVRAGFGNDGLGLN 227
M E V ++ ++K G ++V E +V + GF DG +
Sbjct: 104 LMPERNV----VSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDD 159
Query: 228 A--LVDMYP---------------KCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
A L +M P K G + +AR+IF+ M R ++W +M+T Y +
Sbjct: 160 ACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRV 219
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSI------- 323
+A F M P+ +S +SM +G +G + E +
Sbjct: 220 DDARKIFDVM------PEKTEVSW-----TSMLMGYVQNGRI--EDAEELFEVMPVKPVI 266
Query: 324 -ANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAG 379
N++I + G + AR +F+ M ER+ SW ++I H ++ EAL LF M++ G
Sbjct: 267 ACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQG 326
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYA----------------LMT------EKYKIK 417
V+P T +S+LS CA L ++ G +++A LMT E K K
Sbjct: 327 VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSK 386
Query: 418 PIMEHH--------GCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLH 467
I + +++ Y G+ E+A + + S + P + + A L +C
Sbjct: 387 LIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYA 446
Query: 468 GSVAIG-EI--AANKLFDLEPDNEHNFALLMKIYENAGRL-EDMERVRMMLVD 516
G V G +I + +F ++P H +A ++ + AGR E ME + M V+
Sbjct: 447 GMVEEGLKIYESMESVFGVKPITAH-YACMVDMLGRAGRFNEAMEMIDSMTVE 498
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 56/288 (19%)
Query: 227 NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCK 286
N + + G I +ARK+F+ + SWNSM+ Y + + +A F +M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 287 PDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
PD R + W N L+ Y K+G +D AR +F+L
Sbjct: 75 PD-------------------------RNIISW-----NGLVSGYMKNGEIDEARKVFDL 104
Query: 347 MPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG 403
MPER+VVSW +++ + + + A +LF +M E +K+++ +L G ++D
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDA 160
Query: 404 VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYS 463
+LY ++ +K I HG + G V++A I + SE + T W ++
Sbjct: 161 CKLYEMIPDKDNIARTSMIHG-----LCKEGRVDEAREIFDE--MSERSVIT-WTTMVTG 212
Query: 464 CYLHGSVAIGEIAANKLFDLEPD-NEHNFALLMKIYENAGRLEDMERV 510
+ V A K+FD+ P+ E ++ ++ Y GR+ED E +
Sbjct: 213 YGQNNRVD----DARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL 256
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
++G+R S+L C ++ HG QVH + +V V S L+ +Y G +
Sbjct: 324 KQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELV 383
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRVLK 196
+ +FD+ +D WNS+ISGYA GL ++A+ ++ +M G +P+ TF L
Sbjct: 384 KSKLIFDRFPSKD--IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLN--ALVDMYPKCGHIVKARKIFNRMH-RRD 253
C+ G++E G +++ ++ + FG + + +VDM + G +A ++ + M D
Sbjct: 442 ACSYAGMVEEGLKIY-ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPD 500
Query: 254 SVSWNSMLTA-YVHHGLEVEAMDTFCQMVLEGCKPD 288
+ W S+L A H L+V FC L +P+
Sbjct: 501 AAVWGSLLGACRTHSQLDVA---EFCAKKLIEIEPE 533
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 250/458 (54%), Gaps = 28/458 (6%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ G D + + + C + IR G Q+H ++ + ++ V + LV Y G
Sbjct: 98 VSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGES 157
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
+A +F +M RD + W +I+G+ + GLY +A+ + +M VEP+L T+ VL
Sbjct: 158 RNACKVFGEMPVRDVVS--WTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLV 212
Query: 197 VCAGLGLLEVGEEVHRHAV-RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
+G L +G+ +H + RA + G NAL+DMY KC + A ++F + ++D V
Sbjct: 213 SSGRVGCLSLGKGIHGLILKRASLISLETG-NALIDMYVKCEQLSDAMRVFGELEKKDKV 271
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQM-VLEGCKPDFVSISTILTGVSSM---DLGVQIHGW 311
SWNSM++ VH EA+D F M G KPD ++++L+ +S+ D G +H +
Sbjct: 272 SWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEY 331
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA---HCKHREA 368
++ G++W+ I +++ Y+K G ++TA +FN + ++V +WN+++ H E+
Sbjct: 332 ILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLES 391
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM-TEKYKIKPIMEHHGCMV 427
L FE+M + G KP+ +TF++ L+AC + GLV++G R + M + +Y + P +EH+GCM+
Sbjct: 392 LRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMI 451
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQ-----WGALLYSCYLHGSV-AIGEIAANKLF 481
+L RAG++++A ++ A P + GA+L +C G++ + + +
Sbjct: 452 DLLCRAGLLDEALELV-------KAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFL 504
Query: 482 DLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
D+E ++ + LL I+ R +D+ R+R ++ +G+
Sbjct: 505 DIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGI 542
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 186/385 (48%), Gaps = 14/385 (3%)
Query: 91 LLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
LLE R ++R Q+ +LI LLR ++ + +K+V + +
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDL-IINKVVTFLGKSADFASYSSVILHSIRS 67
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
S+F +N+L+S YA I Y V G PD+FTFP V K C + G++
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
+H + GF +D N+LV Y CG A K+F M RD VSW ++T + GL
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGL 187
Query: 270 EVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLII 329
EA+DTF +M +E +V + V + LG IHG +++R +L N+LI
Sbjct: 188 YKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 330 AYSKHGRLDTARWLFNLMPERDVVSWNSIISA--HC-KHREALALFEQME-EAGVKPDKI 385
Y K +L A +F + ++D VSWNS+IS HC + +EA+ LF M+ +G+KPD
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 386 TFVSLLSACAYLGLVNDG--VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
S+LSACA LG V+ G V Y L IK +V++Y + G +E A I
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTA---GIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 444 TDGIGSEAAGPTQWGALLYSCYLHG 468
G + W ALL +HG
Sbjct: 365 N---GIRSKNVFTWNALLGGLAIHG 386
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/472 (30%), Positives = 244/472 (51%), Gaps = 46/472 (9%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G+ D ++ +SL+ + +R S + I + S L+ YA+ G + ++
Sbjct: 217 GVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR----EPDDHSLSALISGYANCGRVNES 272
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
LFD+ S R WNS+ISGY + +A+ L+ +M E E D T V+ C
Sbjct: 273 RGLFDRKSNR--CVILWNSMISGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINACI 329
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCG---------------------- 237
GLG LE G+++H HA + G +D + + L+DMY KCG
Sbjct: 330 GLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNS 389
Query: 238 ---------HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD 288
I A+++F R+ + +SWNSM + +G VE ++ F QM D
Sbjct: 390 MIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTD 449
Query: 289 FVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN 345
VS+S++++ +SS++LG Q+ G++ + +++SLI Y K G ++ R +F+
Sbjct: 450 EVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFD 509
Query: 346 LMPERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
M + D V WNS+IS + + EA+ LF++M AG++P +ITF+ +L+AC Y GLV +
Sbjct: 510 TMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEE 569
Query: 403 GVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLY 462
G +L+ M + P EH CMV+L RAG VE+A +++ + + + G + W ++L
Sbjct: 570 GRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEE-MPFDVDG-SMWSSILR 627
Query: 463 SCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMML 514
C +G A+G+ AA K+ +LEP+N + L I+ +G E VR ++
Sbjct: 628 GCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLM 679
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 132/604 (21%), Positives = 239/604 (39%), Gaps = 181/604 (29%)
Query: 73 IEASIEKGIRID-PEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKN-----VGVTSKL 126
+ +S + + +D Y LL++C + R+ + R +LL+K V V + L
Sbjct: 13 LSSSFLQAMEVDCRRYYVRLLQSC----SSRNRETLWRQTNGLLLKKGFLSSIVIVANHL 68
Query: 127 VRLYASFGYMEDAHDLFDQMSQRD-----------------------------ASAFPWN 157
+++Y+ G M A +LFD+M R+ + WN
Sbjct: 69 LQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWN 128
Query: 158 SLISGYAQLGLYDDAIALYFQMVEEGV----------------------------EPDLF 189
++SG+A+ G A L+ M E+ V D
Sbjct: 129 VVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAI 188
Query: 190 TFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGL------------------------- 224
T VLK CA L L+ G+++H + G D
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 225 ------GLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFC 278
L+AL+ Y CG + ++R +F+R R + WNSM++ Y+ + +++EA+ F
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 279 QMVLEGCKPDFVSISTILT---GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSK-- 333
+M E + D +++ ++ G+ ++ G Q+H + G+ ++ +A++L+ YSK
Sbjct: 309 EMRNET-REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 334 -----------------------------HGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
GR+D A+ +F + + ++SWNS+ + +
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 365 HR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIME 421
+ E L F QM + + D+++ S++SACA + + G +++A T +
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT-IVGLDSDQV 486
Query: 422 HHGCMVNLYGRAGMVEKAYSII-------------------TDGIGSEA---------AG 453
+++LY + G VE + T+G G EA AG
Sbjct: 487 VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG 546
Query: 454 --PTQ--WGALLYSCYLHGSVAIGEIAANKLFD-------LEPDNEHNFALLMKIYENAG 502
PTQ + +L +C G V G KLF+ PD EH F+ ++ + AG
Sbjct: 547 IRPTQITFMVVLTACNYCGLVEEGR----KLFESMKVDHGFVPDKEH-FSCMVDLLARAG 601
Query: 503 RLED 506
+E+
Sbjct: 602 YVEE 605
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 247/452 (54%), Gaps = 20/452 (4%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
GI D AS L+ C + G QVH L L +++ S L+ +Y+ G ++DA
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+F + + S N+LI+GY+Q L ++A+ L+ +M+ GV P TF +++ C
Sbjct: 584 RKVFSSLPE--WSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDG--LGLNALVDMYPKCGHIVKARKIFNRMHRRDS-VS 256
L +G + H + GF ++G LG+ +L+ MY + +A +F+ + S V
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGI-SLLGMYMNSRGMTEACALFSELSSPKSIVL 699
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVI 313
W M++ + +G EA+ + +M +G PD FV++ + + +SS+ G IH +
Sbjct: 700 WTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIF 759
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER-DVVSWNSIISAHCKH---REAL 369
+ + +N+LI Y+K G + + +F+ M R +VVSWNS+I+ + K+ +AL
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDAL 819
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
+F+ M ++ + PD+ITF+ +L+AC++ G V+DG +++ +M +Y I+ ++H CMV+L
Sbjct: 820 KIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDL 879
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDN 487
GR G +++A D I ++ P W +LL +C +HG GEI+A KL +LEP N
Sbjct: 880 LGRWGYLQEA----DDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQN 935
Query: 488 EHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ LL IY + G E +R ++ DRG+
Sbjct: 936 SSAYVLLSNIYASQGCWEKANALRKVMRDRGV 967
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 171/315 (54%), Gaps = 7/315 (2%)
Query: 104 GSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGY 163
G VH + L N+ V S LV +Y+ ME A +F+ + +++ F WN++I GY
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN-DVF-WNAMIRGY 403
Query: 164 AQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDG 223
A G + L+ M G D FTF +L CA LE+G + H ++ +
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 463
Query: 224 LGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE 283
NALVDMY KCG + AR+IF RM RD+V+WN+++ +YV E EA D F +M L
Sbjct: 464 FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 284 GCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTA 340
G D +++ L T V + G Q+H ++ G++ +L +SLI YSK G + A
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 341 RWLFNLMPERDVVSWNSIISAHCKH--REALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
R +F+ +PE VVS N++I+ + ++ EA+ LF++M GV P +ITF +++ AC
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE 643
Query: 399 LVNDGVRLYALMTEK 413
+ G + + +T++
Sbjct: 644 SLTLGTQFHGQITKR 658
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 235/479 (49%), Gaps = 31/479 (6%)
Query: 52 LIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLI 111
+I + H+ +E + D+++S G ID + SLL TC S + GSQ H +I
Sbjct: 399 MIRGYAHNGESHKVME-LFMDMKSS---GYNIDDFTFTSLLSTCAASHDLEMGSQFHSII 454
Query: 112 PTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDD 171
L KN+ V + LV +YA G +EDA +F++M RD WN++I Y Q +
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD--NVTWNTIIGSYVQDENESE 512
Query: 172 AIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVD 231
A L+ +M G+ D LK C + L G++VH +V+ G D ++L+D
Sbjct: 513 AFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLID 572
Query: 232 MYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVS 291
MY KCG I ARK+F+ + VS N+++ Y + LE EA+ F +M+ G P ++
Sbjct: 573 MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEIT 631
Query: 292 ISTILTGV---SSMDLGVQIHGWVIRRGVEWNLS-IANSLIIAYSKHGRLDTARWLFN-L 346
+TI+ S+ LG Q HG + +RG + SL+ Y + A LF+ L
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL 691
Query: 347 MPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG 403
+ +V W ++S H + + EAL +++M GV PD+ TFV++L C+ L + +G
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Query: 404 VRLYALMTE-KYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLY 462
+++L+ + + + + ++++Y + G + K S + D + + W +L+
Sbjct: 752 RAIHSLIFHLAHDLDELTSN--TLIDMYAKCGDM-KGSSQVFDEM-RRRSNVVSWNSLIN 807
Query: 463 SCYLHGSVAIGEIAANKLFD------LEPDNEHNFALLMKIYENAGRLEDMERVRMMLV 515
+G A K+FD + PD E F ++ +AG++ D ++ M++
Sbjct: 808 GYAKNGYAE----DALKIFDSMRQSHIMPD-EITFLGVLTACSHAGKVSDGRKIFEMMI 861
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 170/325 (52%), Gaps = 9/325 (2%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
++ Y G ++DA LF +MS D A WN +ISG+ + G AI +F M + V+
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVA--WNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
T VL + L++G VH A++ G ++ ++LV MY KC + A K+
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---M 302
F + ++ V WN+M+ Y H+G + M+ F M G D + +++L+ ++ +
Sbjct: 385 FEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDL 444
Query: 303 DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH 362
++G Q H +I++ + NL + N+L+ Y+K G L+ AR +F M +RD V+WN+II ++
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSY 504
Query: 363 CK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
+ EA LF++M G+ D S L AC ++ + G +++ L + K +
Sbjct: 505 VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL-SVKCGLDRD 563
Query: 420 MEHHGCMVNLYGRAGMVEKAYSIIT 444
+ ++++Y + G+++ A + +
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFS 588
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 179/382 (46%), Gaps = 44/382 (11%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLV 127
+VL+ + E I + ++ +L TC R + G Q+H + + L +N LV
Sbjct: 143 KVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALV 202
Query: 128 RLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPD 187
+YA + DA +F+ + D + W L SGY + GL ++A+ ++ +M +EG PD
Sbjct: 203 DMYAKCDRISDARRVFEWIV--DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPD 260
Query: 188 LFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN 247
F V ++ Y + G + AR +F
Sbjct: 261 HLAFVTV-----------------------------------INTYIRLGKLKDARLLFG 285
Query: 248 RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDL 304
M D V+WN M++ + G E A++ F M K ++ ++L+ V+++DL
Sbjct: 286 EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDL 345
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
G+ +H I+ G+ N+ + +SL+ YSK +++ A +F + E++ V WN++I +
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 365 HREA---LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIME 421
+ E+ + LF M+ +G D TF SLLS CA + G + ++++ +K K +
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 422 HHGCMVNLYGRAGMVEKAYSII 443
+ +V++Y + G +E A I
Sbjct: 466 GNA-LVDMYAKCGALEDARQIF 486
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 144/312 (46%), Gaps = 38/312 (12%)
Query: 100 AIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSL 159
A+R G VH + + + + +V LYA + A FD + ++D +A WNS+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTA--WNSM 131
Query: 160 ISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF 219
+S Y+ +G + + + E + P+ FTF VL CA +E G ++H ++ G
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 220 GNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQ 279
+ ALVDMY KC I AR++F + ++V W + + YV GL EA+ F +
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 280 MVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDT 339
M EG +PD ++ T++ Y + G+L
Sbjct: 252 MRDEGHRPDHLAFVTVIN--------------------------------TYIRLGKLKD 279
Query: 340 ARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAY 396
AR LF M DVV+WN +IS H K A+ F M ++ VK + T S+LSA
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 397 LGLVNDGVRLYA 408
+ ++ G+ ++A
Sbjct: 340 VANLDLGLVVHA 351
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 174/382 (45%), Gaps = 38/382 (9%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKN---VGV 122
+E+ + + + +G+ +A+++E C++ +++ G+Q H I +G+
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 123 TSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
+ L+ +Y + M +A LF ++S S W ++SG++Q G Y++A+ Y +M +
Sbjct: 670 S--LLGMYMNSRGMTEACALFSELSS-PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 183 GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKA 242
GV PD TF VL+VC+ L L G +H D L N L+DMY KCG + +
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 243 RKIFNRMHRRDS-VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS 301
++F+ M RR + VSWNS++ Y +G +A+ F M PD ++ +LT S
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS- 845
Query: 302 MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA 361
H + G + I +I Y R+D + +L+ W + A
Sbjct: 846 -------HAGKVSDGRK----IFEMMIGQYGIEARVDHVACMVDLLGR-----WGYLQEA 889
Query: 362 HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIME 421
+ +E +KPD + SLL AC G D +R + +++P
Sbjct: 890 D----------DFIEAQNLKPDARLWSSLLGACRIHG---DDIRGEISAEKLIELEPQNS 936
Query: 422 H-HGCMVNLYGRAGMVEKAYSI 442
+ + N+Y G EKA ++
Sbjct: 937 SAYVLLSNIYASQGCWEKANAL 958
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 123/237 (51%), Gaps = 12/237 (5%)
Query: 204 LEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTA 263
L +G+ VH ++ G ++G NA+VD+Y KC + A K F+ + + D +WNSML+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSM 134
Query: 264 YVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWN 320
Y G + + +F + P+ + S +L+ ++++ G QIH +I+ G+E N
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 321 LSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEE 377
+L+ Y+K R+ AR +F + + + V W + S + K EA+ +FE+M +
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 378 AGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAG 434
G +PD + FV++++ LG + D L+ M+ P + M++ +G+ G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRG 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 301 SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIIS 360
++ +G +H + G++ + N+++ Y+K ++ A F+ + E+DV +WNS++S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 361 AHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIK 417
+ K + L F + E + P+K TF +LS CA V G +++ M IK
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-----IK 188
Query: 418 PIMEHH----GCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQW----GALLYSCYLHGS 469
+E + G +V++Y + + A + +W + ++C G
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVF------------EWIVDPNTVCWTCLFSGY 236
Query: 470 VAIG-EIAANKLFDLEPDNEHN-----FALLMKIYENAGRLED 506
V G A +F+ D H F ++ Y G+L+D
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 240/453 (52%), Gaps = 23/453 (5%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
KG+ D + + L+ + + G H + + V + L+ +Y F +
Sbjct: 325 KGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSV 384
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A LF ++S+ + + WN+++ GY ++ + I L+ ++ G+E D + V+ C
Sbjct: 385 AEKLFCRISE-EGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSC 443
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
+ +G + +G+ +H + V+ +N+L+D+Y K G + A ++F + ++WN
Sbjct: 444 SHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWN 502
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRR 315
+M+ +YVH +A+ F +MV E KP +++ T+L S++ G IH ++
Sbjct: 503 AMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET 562
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
E NLS++ +LI Y+K G L+ +R LF+ ++D V WN +IS + H A+ALF
Sbjct: 563 EHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALF 622
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
+QMEE+ VKP TF++LLSAC + GLV G +L+ L +Y +KP ++H+ C+V+L R
Sbjct: 623 DQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF-LKMHQYDVKPNLKHYSCLVDLLSR 681
Query: 433 AGMVEKAYSIIT------DGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD 486
+G +E+A S + DG+ WG LL SC HG +G A + +P
Sbjct: 682 SGNLEEAESTVMSMPFSPDGV--------IWGTLLSSCMTHGEFEMGIRMAERAVASDPQ 733
Query: 487 NEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
N+ + +L +Y AG+ E+ ER R M+ + G+
Sbjct: 734 NDGYYIMLANMYSAAGKWEEAERAREMMRESGV 766
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 191/405 (47%), Gaps = 30/405 (7%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
+N V + V Y+ G+++DA +FD+M RD A W ++ISG+ Q G + +
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVA--WTAIISGHVQNGESEGGLGYLC 216
Query: 178 QMVEEGVEPDLFTFPRVL----KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMY 233
+M G + D PR L + C+ LG L+ G +H AV+ G + +++ Y
Sbjct: 217 KMHSAGSDVDKPN-PRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFY 275
Query: 234 PKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSIS 293
K G+ +A F + D SW S++ + G E+ D F +M +G PD V IS
Sbjct: 276 SKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVIS 335
Query: 294 TILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLF-NLMPE 349
++ + M L G HG+VIR + ++ NSL+ Y K L A LF + E
Sbjct: 336 CLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEE 395
Query: 350 RDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
+ +WN+++ + K H + + LF +++ G++ D + S++S+C+++G V G L
Sbjct: 396 GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL 455
Query: 407 YALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYL 466
+ + K + + +++LYG+ G + A+ + + W A++ S Y+
Sbjct: 456 HCYVV-KTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA----DTNVITWNAMIAS-YV 509
Query: 467 HGSVAIGEIAANKLFD------LEPDNEHNFALLMKIYENAGRLE 505
H + IA LFD +P + LLM N G LE
Sbjct: 510 HCEQSEKAIA---LFDRMVSENFKPSSITLVTLLMACV-NTGSLE 550
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 158/326 (48%), Gaps = 12/326 (3%)
Query: 95 CYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAF 154
C +S ++ + + LI T L +N+ V SKL+ YAS+G + +F +++RD F
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDI--F 91
Query: 155 PWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHA 214
WNS+I + G Y ++ +F M+ G PD FT P V+ CA L VG VH
Sbjct: 92 LWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 215 VR-AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEA 273
++ GF + + V Y KCG + A +F+ M RD V+W ++++ +V +G
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 274 MDTFCQMVLEGCKPDFVSISTILTG------VSSMDLGVQIHGWVIRRGVEWNLSIANSL 327
+ C+M G D + T+ G + ++ G +HG+ ++ G+ + + +S+
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 328 IIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDK 384
YSK G A F + + D+ SW SII++ + E+ +F +M+ G+ PD
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALM 410
+ L++ + LV G + +
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFV 357
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---A 368
+I G+ N+ +A+ LI +Y+ +G+ + + +F+L+ RD+ WNSII AH + + +
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARS 109
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
L F M +G PD T ++SACA L + G ++ L+ + V
Sbjct: 110 LCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVY 169
Query: 429 LYGRAGMVEKAYSII-----------TDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAA 477
Y + G ++ A + T I G L Y C +H + +
Sbjct: 170 FYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS------ 223
Query: 478 NKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
D++ N + N G L++ + V GL
Sbjct: 224 ----DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGL 261
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 246/472 (52%), Gaps = 52/472 (11%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
L++ ++ G +H + + +V V + L+ Y S G ++ A +F + ++D
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 151 ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
+ WNS+I+G+ Q G D A+ L+ +M E V+ T VL CA + LE G +V
Sbjct: 197 VVS--WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 254
Query: 211 HRHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIF----------------------- 246
+ + N L L NA++DMY KCG I A+++F
Sbjct: 255 CSY-IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 313
Query: 247 --------NRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE-GCKPDFVSISTILT 297
N M ++D V+WN++++AY +G EA+ F ++ L+ K + +++ + L+
Sbjct: 314 YEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLS 373
Query: 298 G---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
V +++LG IH ++ + G+ N + ++LI YSK G L+ +R +FN + +RDV
Sbjct: 374 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 433
Query: 355 WNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
W+++I H EA+ +F +M+EA VKP+ +TF ++ AC++ GLV++ L+ M
Sbjct: 434 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEA----AGPTQWGALLYSCYLH 467
Y I P +H+ C+V++ GR+G +EKA I EA + WGALL +C +H
Sbjct: 494 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI------EAMPIPPSTSVWGALLGACKIH 547
Query: 468 GSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
++ + E+A +L +LEP N+ LL IY G+ E++ +R + GL
Sbjct: 548 ANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL 599
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 218/441 (49%), Gaps = 53/441 (12%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYA--SFGYMEDAHDLFDQ 145
+ SL+E C ++R Q H + + SKL + A SF +E A +FD+
Sbjct: 33 HISLIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDE 89
Query: 146 MSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRVLKVCAGLGLL 204
+ + ++ F WN+LI YA +I + MV E P+ +TFP ++K A + L
Sbjct: 90 IPKPNS--FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 205 EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAY 264
+G+ +H AV++ G+D N+L+ Y CG + A K+F + +D VSWNSM+ +
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 265 VHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNL 321
V G +A++ F +M E K V++ +L+ + +++ G Q+ ++ V NL
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 322 SIANSLIIAYSKHGRLDTARWLF-------------------------------NLMPER 350
++AN+++ Y+K G ++ A+ LF N MP++
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 351 DVVSWNSIISAH---CKHREALALFEQME-EAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
D+V+WN++ISA+ K EAL +F +++ + +K ++IT VS LSACA +G + G +
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 407 YALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYL 466
++ + +K+ I+ ++++Y + G +EK+ + E W A++ +
Sbjct: 388 HSYI-KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN---SVEKRDVFVWSAMIGGLAM 443
Query: 467 HGSVAIGEIAANKLFDLEPDN 487
HG G A + + ++ N
Sbjct: 444 HG---CGNEAVDMFYKMQEAN 461
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 7/213 (3%)
Query: 74 EASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASF 133
E ++K ++++ S L C + A+ G +H I +R N VTS L+ +Y+
Sbjct: 354 ELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKC 413
Query: 134 GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
G +E + ++F+ + +RD F W+++I G A G ++A+ ++++M E V+P+ TF
Sbjct: 414 GDLEKSREVFNSVEKRD--VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 471
Query: 194 VLKVCAGLGLLEVGEEV-HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR 252
V C+ GL++ E + H+ G + +VD+ + G++ KA K M
Sbjct: 472 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 531
Query: 253 DSVS-WNSMLTA-YVHHGLEVEAMDTFCQMVLE 283
S S W ++L A +H L + M C +LE
Sbjct: 532 PSTSVWGALLGACKIHANLNLAEMA--CTRLLE 562
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 221/406 (54%), Gaps = 12/406 (2%)
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV- 180
+ +LV Y G+ A LFD+M +RD + WNSLISGY+ G + +M+
Sbjct: 68 IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVS--WNSLISGYSGRGYLGKCFEVLSRMMI 125
Query: 181 -EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
E G P+ TF ++ C G E G +H ++ G + +NA ++ Y K G +
Sbjct: 126 SEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDL 185
Query: 240 VKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV 299
+ K+F + ++ VSWN+M+ ++ +GL + + F G +PD + +L
Sbjct: 186 TSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSC 245
Query: 300 SSMD---LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWN 356
M L IHG ++ G N I +L+ YSK GRL+ + +F+ + D ++W
Sbjct: 246 EDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWT 305
Query: 357 SIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
++++A+ H R+A+ FE M G+ PD +TF LL+AC++ GLV +G + M+++
Sbjct: 306 AMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
Query: 414 YKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIG 473
Y+I P ++H+ CMV+L GR+G+++ AY +I + ++G WGALL +C ++ +G
Sbjct: 366 YRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGV--WGALLGACRVYKDTQLG 423
Query: 474 EIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
AA +LF+LEP + N+ +L IY +G +D R+R ++ +GL
Sbjct: 424 TKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGL 469
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 157/345 (45%), Gaps = 13/345 (3%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E G R + + S++ C + G +H L+ + + V V + + Y G +
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE-GVEPDLFTFPRVLK 196
+ LF+ +S ++ + WN++I + Q GL + +A YF M G EPD TF VL+
Sbjct: 187 SSCKLFEDLSIKNLVS--WNTMIVIHLQNGLAEKGLA-YFNMSRRVGHEPDQATFLAVLR 243
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C +G++ + + +H + GF + AL+D+Y K G + + +F+ + DS++
Sbjct: 244 SCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMA 303
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQ----IHGWV 312
W +ML AY HG +A+ F MV G PD V+ + +L S L +
Sbjct: 304 WTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMS 363
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISAHCKHREALAL 371
R ++ L + ++ + G L A L MP E W +++ A C+ + L
Sbjct: 364 KRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA-CRVYKDTQL 422
Query: 372 FEQMEEA--GVKP-DKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
+ E ++P D +V L + + GL D R+ LM +K
Sbjct: 423 GTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQK 467
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 163/334 (48%), Gaps = 20/334 (5%)
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
++ ++ + +K C + L + +H V++ G + LV Y + GH V A
Sbjct: 30 LDANVSSLIAAVKSCVSIELCRL---LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAE 86
Query: 244 KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE--GCKPDFVSISTILTGV-- 299
K+F+ M RD VSWNS+++ Y G + + +M++ G +P+ V+ ++++
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 300 -SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI 358
S + G IHG V++ GV + + N+ I Y K G L ++ LF + +++VSWN++
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTM 206
Query: 359 ISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYAL-MTEKY 414
I H ++ + LA F G +PD+ TF+++L +C +G+V ++ L M +
Sbjct: 207 IVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGF 266
Query: 415 KIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL--YSCYLHGSVAI 472
+ +++LY + G +E + ++ + ++ W A+L Y+ + G AI
Sbjct: 267 SGNKCIT--TALLDLYSKLGRLEDSSTVFHEITSPDSMA---WTAMLAAYATHGFGRDAI 321
Query: 473 GEIAANKLFDLEPDNEHNFALLMKIYENAGRLED 506
+ + PD+ F L+ ++G +E+
Sbjct: 322 KHFELMVHYGISPDHV-TFTHLLNACSHSGLVEE 354
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Query: 48 STPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQV 107
+T ++IH Q + E+ L S G D + ++L +C +R +
Sbjct: 204 NTMIVIHLQ------NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGI 257
Query: 108 HRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLG 167
H LI N +T+ L+ LY+ G +ED+ +F +++ D+ A W ++++ YA G
Sbjct: 258 HGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMA--WTAMLAAYATHG 315
Query: 168 LYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
DAI + MV G+ PD TF +L C+ GL+E G+
Sbjct: 316 FGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGK 356
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 260/481 (54%), Gaps = 66/481 (13%)
Query: 99 QAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGY----MEDAHDLFDQMSQRDASAF 154
+ IR SQ+H + ++ ++++R A+ ++ AH +F+QM QR+ F
Sbjct: 34 RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNC--F 91
Query: 155 PWNSLISGYAQLGLYDD----AIALYFQMV-EEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
WN++I G+++ +D AI L+++M+ +E VEP+ FTFP VLK CA G ++ G++
Sbjct: 92 SWNTIIRGFSESD--EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCG-----------HIVK----------------- 241
+H A++ GFG D ++ LV MY CG +I++
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 242 -----------------ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG 284
AR +F++M +R VSWN+M++ Y +G +A++ F +M
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 285 CKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTAR 341
+P++V++ ++L +S S++LG +H + G+ + + ++LI YSK G ++ A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 342 WLFNLMPERDVVSWNSIISA---HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
+F +P +V++W+++I+ H + +A+ F +M +AGV+P + +++LL+AC++ G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWG 458
LV +G R ++ M ++P +EH+GCMV+L GR+G++++A I + W
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILN--MPIKPDDVIWK 447
Query: 459 ALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRG 518
ALL +C + G+V +G+ AN L D+ P + + L +Y + G ++ +R+ + ++
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 519 L 519
+
Sbjct: 508 I 508
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 248/480 (51%), Gaps = 46/480 (9%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQ-AIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGY 135
+++G+ D + LL R A+ G ++H + L N+ V + LV++Y+ G
Sbjct: 126 LKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGL 185
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
M+ A +FD+ + D F WN +ISGY ++ Y+++I L +M V P T VL
Sbjct: 186 MDMARGVFDRRCKEDV--FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVL 243
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH----------------- 238
C+ + ++ + VH + NALV+ Y CG
Sbjct: 244 SACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
Query: 239 ----IVK----------ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG 284
IVK AR F++M RD +SW M+ Y+ G E+++ F +M G
Sbjct: 304 SWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAG 363
Query: 285 CKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTAR 341
PD ++ ++LT + S+++G I ++ + ++ ++ + N+LI Y K G + A+
Sbjct: 364 MIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQ 423
Query: 342 WLFNLMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
+F+ M +RD +W +++ + + + +EA+ +F QM++ ++PD IT++ +LSAC + G
Sbjct: 424 KVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSG 483
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ-- 456
+V+ + +A M ++I+P + H+GCMV++ GRAG+V++AY I+ P
Sbjct: 484 MVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILR----KMPMNPNSIV 539
Query: 457 WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVD 516
WGALL + LH + E+AA K+ +LEPDN +ALL IY R +D+ VR +VD
Sbjct: 540 WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVD 599
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 201/416 (48%), Gaps = 56/416 (13%)
Query: 75 ASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASF- 133
++I + I D + S+L C + + Q+H T + N KL + S
Sbjct: 24 STITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRL 80
Query: 134 -GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFP 192
G++ A+ LF ++ + D WN++I G++++ + + LY M++EGV PD TFP
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVV--WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFP 138
Query: 193 RVLKVCAGL----GLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNR 248
+L GL G L G+++H H V+ G G++ NALV MY CG + AR +F+R
Sbjct: 139 FLLN---GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR 195
Query: 249 MHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLG 305
+ D SWN M++ Y E+++ +M P V++ +L+ S + DL
Sbjct: 196 RCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLC 255
Query: 306 VQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH 365
++H +V E +L + N+L+ AY+ G +D A +F M RDV+SW SI+ + +
Sbjct: 256 KRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVER 315
Query: 366 ----------------------------------REALALFEQMEEAGVKPDKITFVSLL 391
E+L +F +M+ AG+ PD+ T VS+L
Sbjct: 316 GNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVL 375
Query: 392 SACAYLGLVNDG--VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
+ACA+LG + G ++ Y +K KIK + ++++Y + G EKA + D
Sbjct: 376 TACAHLGSLEIGEWIKTY---IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHD 428
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 240/452 (53%), Gaps = 47/452 (10%)
Query: 110 LIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQL--- 166
+I T L R N+ V +K + ++ G++ A+ +F Q + + N++I + L
Sbjct: 38 MIITGLNRDNLNV-AKFIEACSNAGHLRYAYSVFTH--QPCPNTYLHNTMIRALSLLDEP 94
Query: 167 GLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL 226
+ AI +Y ++ +PD FTFP VLK+ + + G ++H V GF + +
Sbjct: 95 NAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV 154
Query: 227 NALVDMYPKCGHIVKARKIFNRMHRRD--------------------------------- 253
L+ MY CG + ARK+F+ M +D
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHG 310
VSW +++ Y G EA++ F +M++E +PD V++ +L+ + S++LG +I
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---RE 367
+V RG+ +S+ N++I Y+K G + A +F + ER+VV+W +II+ H E
Sbjct: 275 YVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAE 334
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
ALA+F +M +AGV+P+ +TF+++LSAC+++G V+ G RL+ M KY I P +EH+GCM+
Sbjct: 335 ALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMI 394
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDN 487
+L GRAG + +A +I A WG+LL + +H + +GE A ++L LEP+N
Sbjct: 395 DLLGRAGKLREADEVIKS--MPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNN 452
Query: 488 EHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
N+ LL +Y N GR ++ +R M+ G+
Sbjct: 453 SGNYMLLANLYSNLGRWDESRMMRNMMKGIGV 484
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 151/321 (47%), Gaps = 38/321 (11%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
D + +L+ R + G Q+H + +V V + L+++Y S G + DA +F
Sbjct: 115 DTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMF 174
Query: 144 DQMSQRDASAF-------------------------------PWNSLISGYAQLGLYDDA 172
D+M +D + + W +ISGYA+ G +A
Sbjct: 175 DEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEA 234
Query: 173 IALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NALVD 231
I ++ +M+ E VEPD T VL CA LG LE+GE + + G N + L NA++D
Sbjct: 235 IEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGM-NRAVSLNNAVID 293
Query: 232 MYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVS 291
MY K G+I KA +F ++ R+ V+W +++ HG EA+ F +MV G +P+ V+
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 292 ISTILTGVSS---MDLGVQIHGWVIRR-GVEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
IL+ S +DLG ++ + + G+ N+ +I + G+L A + M
Sbjct: 354 FIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
Query: 348 P-ERDVVSWNSIISAHCKHRE 367
P + + W S+++A H +
Sbjct: 414 PFKANAAIWGSLLAASNVHHD 434
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 165/387 (42%), Gaps = 85/387 (21%)
Query: 204 LEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTA 263
L+ ++ H + + G D L + ++ GH+ A +F ++ N+M+ A
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRA 87
Query: 264 YV------HHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIR 314
H + A+ + ++ KPD F + I VS + G QIHG V+
Sbjct: 88 LSLLDEPNAHSI---AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 315 RGVEW-------------------------------NLSIANSLIIAYSKHGRLDTARWL 343
G + ++++ N+L+ Y K G +D AR L
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 344 FNLMP--ERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
+MP R+ VSW +IS + K EA+ +F++M V+PD++T +++LSACA LG
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII--------------- 443
+ G R+ + + + + + + ++++Y ++G + KA +
Sbjct: 265 SLELGERICSYVDHRGMNRAV-SLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTII 323
Query: 444 ----TDGIGSEA---------AG----PTQWGALLYSCYLHGSVAIGEIAANKL---FDL 483
T G G+EA AG + A+L +C G V +G+ N + + +
Sbjct: 324 AGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGI 383
Query: 484 EPDNEHNFALLMKIYENAGRLEDMERV 510
P+ EH + ++ + AG+L + + V
Sbjct: 384 HPNIEH-YGCMIDLLGRAGKLREADEV 409
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 112/212 (52%), Gaps = 11/212 (5%)
Query: 64 QAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVT 123
+AIE + + ++E D ++L C ++ G ++ + + + V +
Sbjct: 233 EAIEVFQRMLMENVEP----DEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLN 288
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
+ ++ +YA G + A D+F+ +++R+ W ++I+G A G +A+A++ +MV+ G
Sbjct: 289 NAVIDMYAKSGNITKALDVFECVNERN--VVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG--NDGLGLNALVDMYPKCGHIVK 241
V P+ TF +L C+ +G +++G+ + +++R+ +G + ++D+ + G + +
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLF-NSMRSKYGIHPNIEHYGCMIDLLGRAGKLRE 405
Query: 242 ARKIFNRM-HRRDSVSWNSMLTAY-VHHGLEV 271
A ++ M + ++ W S+L A VHH LE+
Sbjct: 406 ADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 220/411 (53%), Gaps = 16/411 (3%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
K + V +KL+ Y G +FD MS R+ ++ISG + L++D + L+
Sbjct: 188 KEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNV--ITLTAVISGLIENELHEDGLRLFS 245
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCG 237
M V P+ T+ L C+G + G+++H + G ++ +AL+DMY KCG
Sbjct: 246 LMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCG 305
Query: 238 HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
I A IF D VS +L +G E EA+ F +M+ G + D +S +L
Sbjct: 306 SIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL- 364
Query: 298 GVSSMD----LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVV 353
GVS +D LG Q+H VI+R N + N LI YSK G L ++ +F MP+R+ V
Sbjct: 365 GVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYV 424
Query: 354 SWNSIISAHCKHREALA---LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
SWNS+I+A +H LA L+E+M VKP +TF+SLL AC+++GL++ G L M
Sbjct: 425 SWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEM 484
Query: 411 TEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSV 470
E + I+P EH+ C++++ GRAG++++A S I D + + W ALL +C HG
Sbjct: 485 KEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFI-DSLPLKPDCKI-WQALLGACSFHGDT 542
Query: 471 AIGEIAANKLFDLEPDNEHNFALLMKIYENAG----RLEDMERVRMMLVDR 517
+GE AA +LF PD+ L+ IY + G R + ++R++ M V +
Sbjct: 543 EVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTK 593
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 138/283 (48%), Gaps = 7/283 (2%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
Y S L C SQ I G Q+H L+ + + + S L+ +Y+ G +EDA +F+ +
Sbjct: 259 YLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTT 318
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
+ D + ++ G AQ G ++AI + +M++ GVE D VL V L +G
Sbjct: 319 EVDEVSM--TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLG 376
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
+++H ++ F + N L++MY KCG + ++ +F RM +R+ VSWNSM+ A+ H
Sbjct: 377 KQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARH 436
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIR-RGVEWNLSI 323
G + A+ + +M KP V+ ++L S +D G ++ + G+E
Sbjct: 437 GHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEH 496
Query: 324 ANSLIIAYSKHGRLDTARWLFNLMPER-DVVSWNSIISAHCKH 365
+I + G L A+ + +P + D W +++ A H
Sbjct: 497 YTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFH 539
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 155/332 (46%), Gaps = 10/332 (3%)
Query: 117 RKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALY 176
R + V + L+ LYA G + DA LFD+M RD N + G+ + + L
Sbjct: 87 RNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDV--ISQNIVFYGFLRNRETESGFVLL 144
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
+M+ G D T VL VC V + +H A+ +G+ + N L+ Y KC
Sbjct: 145 KRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKC 203
Query: 237 GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
G V R +F+ M R+ ++ ++++ + + L + + F M P+ V+ + L
Sbjct: 204 GCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSAL 263
Query: 297 ---TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVV 353
+G + G QIH + + G+E L I ++L+ YSK G ++ A +F E D V
Sbjct: 264 AACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEV 323
Query: 354 SWNSI---ISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
S I ++ + EA+ F +M +AGV+ D ++L + G +L++L+
Sbjct: 324 SMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLV 383
Query: 411 TEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
++ ++G ++N+Y + G + + ++
Sbjct: 384 IKRKFSGNTFVNNG-LINMYSKCGDLTDSQTV 414
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 8/210 (3%)
Query: 61 TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
++ +AI+ ++ ++A G+ ID + +++L + ++ G Q+H L+ N
Sbjct: 337 SEEEAIQFFIRMLQA----GVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNT 392
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
V + L+ +Y+ G + D+ +F +M +R+ + WNS+I+ +A+ G A+ LY +M
Sbjct: 393 FVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS--WNSMIAAFARHGHGLAALKLYEEMT 450
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRA-GFGNDGLGLNALVDMYPKCGHI 239
V+P TF +L C+ +GL++ G E+ G ++DM + G +
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 240 VKARKIFNRMHRR-DSVSWNSMLTAYVHHG 268
+A+ + + + D W ++L A HG
Sbjct: 511 KEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 227/417 (54%), Gaps = 22/417 (5%)
Query: 101 IRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLI 160
I +++ ++P K+V ++ ++ G +++A +FD+M +R+ W ++I
Sbjct: 157 IDKARKLYDMMPV----KDVVASTNMIGGLCREGRVDEARLIFDEMRERNV--VTWTTMI 210
Query: 161 SGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG 220
+GY Q D A L F+++ E E ++ +L G +E EE
Sbjct: 211 TGYRQNNRVDVARKL-FEVMPEKTE---VSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV- 265
Query: 221 NDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQM 280
+ NA++ + + G I KAR++F+ M RD+ +W M+ AY G E+EA+D F QM
Sbjct: 266 ---IACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 281 VLEGCKPDFVSISTILT---GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRL 337
+G +P F S+ +IL+ ++S+ G Q+H ++R + ++ +A+ L+ Y K G L
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 338 DTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSAC 394
A+ +F+ +D++ WNSIIS + H EAL +F +M +G P+K+T +++L+AC
Sbjct: 383 VKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
Query: 395 AYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP 454
+Y G + +G+ ++ M K+ + P +EH+ C V++ GRAG V+KA +I A
Sbjct: 443 SYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDA-- 500
Query: 455 TQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVR 511
T WGALL +C H + + E+AA KLF+ EPDN + LL I + + D+ VR
Sbjct: 501 TVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVR 557
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 193/432 (44%), Gaps = 70/432 (16%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
K +G + +V Y S G ++A LFD+MS+R+ + WN L+SGY + + +A ++
Sbjct: 46 KAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVS--WNGLVSGYIKNRMIVEARNVFE 103
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE----------EVHRHAVRAGFGNDGLGLN 227
M E V ++ ++K G++ E EV + G +DG
Sbjct: 104 LMPERNV----VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDK 159
Query: 228 A--LVDMYP---------------KCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
A L DM P + G + +AR IF+ M R+ V+W +M+T Y +
Sbjct: 160 ARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSI------- 323
A F M P+ +S +SM LG + G + E +
Sbjct: 220 DVARKLFEVM------PEKTEVSW-----TSMLLGYTLSGRI--EDAEEFFEVMPMKPVI 266
Query: 324 -ANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAG 379
N++I+ + + G + AR +F+LM +RD +W +I A+ + EAL LF QM++ G
Sbjct: 267 ACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG 326
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
V+P + +S+LS CA L + G +++A + + + + ++ +Y + G + KA
Sbjct: 327 VRPSFPSLISILSVCATLASLQYGRQVHAHLV-RCQFDDDVYVASVLMTMYVKCGELVKA 385
Query: 440 YSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD-----NEHNFALL 494
++ D S+ W +++ HG +GE A K+F P N+ +
Sbjct: 386 -KLVFDRFSSKDI--IMWNSIISGYASHG---LGE-EALKIFHEMPSSGTMPNKVTLIAI 438
Query: 495 MKIYENAGRLED 506
+ AG+LE+
Sbjct: 439 LTACSYAGKLEE 450
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 113/234 (48%), Gaps = 9/234 (3%)
Query: 72 DIEASIEK-GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLY 130
D+ A ++K G+R S+L C ++++G QVH + +V V S L+ +Y
Sbjct: 317 DLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMY 376
Query: 131 ASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFT 190
G + A +FD+ S +D WNS+ISGYA GL ++A+ ++ +M G P+ T
Sbjct: 377 VKCGELVKAKLVFDRFSSKD--IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434
Query: 191 FPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGL--GLNALVDMYPKCGHIVKARKIFNR 248
+L C+ G LE G E+ ++ + F + VDM + G + KA ++
Sbjct: 435 LIAILTACSYAGKLEEGLEIF-ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
Query: 249 MH-RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS 301
M + D+ W ++L A H ++ + + + E +PD +L+ +++
Sbjct: 494 MTIKPDATVWGALLGACKTHS-RLDLAEVAAKKLFEN-EPDNAGTYVLLSSINA 545
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 125/297 (42%), Gaps = 56/297 (18%)
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMD 275
R + G+ + + + G I +ARK F+ + + SWNS+++ Y +GL EA
Sbjct: 10 RTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQ 69
Query: 276 TFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHG 335
F +M R V W N L+ Y K+
Sbjct: 70 LFDEMSE-------------------------------RNVVSW-----NGLVSGYIKNR 93
Query: 336 RLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLS 392
+ AR +F LMPER+VVSW +++ + + EA +LF +M E +++++ +
Sbjct: 94 MIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFG 149
Query: 393 ACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAA 452
G ++ +LY +M +K ++ M+ R G V++A I +
Sbjct: 150 GLIDDGRIDKARKLYDMMP----VKDVVASTN-MIGGLCREGRVDEARLIFDE---MRER 201
Query: 453 GPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD-NEHNFALLMKIYENAGRLEDME 508
W ++ + V + A KLF++ P+ E ++ ++ Y +GR+ED E
Sbjct: 202 NVVTWTTMITGYRQNNRVDV----ARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAE 254
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 228/432 (52%), Gaps = 21/432 (4%)
Query: 81 IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
+ +D + L+ C S ++ G Q+H L+ L + ++ LV Y G + +A
Sbjct: 138 VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEAR 197
Query: 141 DLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG--VEPDLFTFPRVLKVC 198
+F+ + RD WN+L+S Y G+ D+A L M + D FTF +L C
Sbjct: 198 RVFEAVLDRDL--VLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
+E G+++H + + D AL++MY K H+ AR+ F M R+ VSWN
Sbjct: 256 R----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWN 311
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLG---VQIHGWVIRR 315
+M+ + +G EAM F QM+LE +PD ++ +++L+ + Q+ V ++
Sbjct: 312 AMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKK 371
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
G LS+ANSLI +YS++G L A F+ + E D+VSW S+I A H E+L +F
Sbjct: 372 GSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMF 431
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
E M + ++PDKITF+ +LSAC++ GLV +G+R + MTE YKI+ EH+ C+++L GR
Sbjct: 432 ESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGR 490
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHN 490
AG +++A +D + S P+ A C +H + A KL ++EP N
Sbjct: 491 AGFIDEA----SDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVN 546
Query: 491 FALLMKIYENAG 502
+++L Y + G
Sbjct: 547 YSILSNAYVSEG 558
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 181/350 (51%), Gaps = 25/350 (7%)
Query: 103 HGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISG 162
HG V + I L +N KL++ Y +DA LFD+M R+ WN LI G
Sbjct: 59 HGFMVKQGIYNSLFLQN-----KLLQAYTKIREFDDADKLFDEMPLRN--IVTWNILIHG 111
Query: 163 YAQL-GLYDDAIALYF----QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRA 217
Q G + L F +++ V D +F ++++C ++ G ++H V+
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 218 GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTF 277
G + +LV Y KCG IV+AR++F + RD V WN+++++YV +G+ EA F
Sbjct: 172 GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEA---F 228
Query: 278 CQMVLEGC-----KPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYS 332
+ L G + D+ + S++L+ ++ G QIH + + ++++ +A +L+ Y+
Sbjct: 229 GLLKLMGSDKNRFRGDYFTFSSLLSAC-RIEQGKQIHAILFKVSYQFDIPVATALLNMYA 287
Query: 333 KHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVS 389
K L AR F M R+VVSWN++I ++ REA+ LF QM ++PD++TF S
Sbjct: 288 KSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFAS 347
Query: 390 LLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
+LS+CA + + ++ A++T+K + +++ Y R G + +A
Sbjct: 348 VLSSCAKFSAIWEIKQVQAMVTKKGS-ADFLSVANSLISSYSRNGNLSEA 396
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 161/345 (46%), Gaps = 38/345 (11%)
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
K+ A L L ++ H V+ G N N L+ Y K A K+F+ M R+ V
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 256 SWNSMLTAYVHHGLEVEAMDT-------FC---QMVLEGCKPDFVSISTIL---TGVSSM 302
+WN ++ HG+ DT FC +++ D VS ++ T ++M
Sbjct: 104 TWNILI-----HGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNM 158
Query: 303 DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH 362
G+Q+H ++++G+E + + SL+ Y K G + AR +F + +RD+V WN+++S++
Sbjct: 159 KAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSY 218
Query: 363 CKH---REALALFEQM--EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE-KYKI 416
+ EA L + M ++ + D TF SLLSAC + G +++A++ + Y+
Sbjct: 219 VLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQF 274
Query: 417 K-PIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL--YSCYLHGSVAIG 473
P+ ++N+Y ++ + A + W A++ ++ G A+
Sbjct: 275 DIPVAT---ALLNMYAKSNHLSDARECFESMV---VRNVVSWNAMIVGFAQNGEGREAMR 328
Query: 474 EIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRG 518
L +L+PD E FA ++ + ++++V+ M+ +G
Sbjct: 329 LFGQMLLENLQPD-ELTFASVLSSCAKFSAIWEIKQVQAMVTKKG 372
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 234/437 (53%), Gaps = 44/437 (10%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
+ LV+ Y G A +F +M D S+F N +I GYA+ G +A+ LYF+MV +G
Sbjct: 170 NSLVKFYMELGNFGVAEKVFARMPHPDVSSF--NVMIVGYAKQGFSLEALKLYFKMVSDG 227
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAG--FGNDGLGLNALVDMYPKC----- 236
+EPD +T +L C L + +G+ VH R G + ++ + NAL+DMY KC
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 237 --------------------------GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
G + A+ +F++M +RD VSWNS+L Y G +
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 271 VEAM-DTFCQM-VLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIAN 325
+ + F +M ++E KPD V++ ++++G ++ + G +HG VIR ++ + +++
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSS 407
Query: 326 SLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA---HCKHREALALFEQMEEAGVKP 382
+LI Y K G ++ A +F E+DV W S+I+ H ++AL LF +M+E GV P
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 383 DKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
+ +T +++L+AC++ GLV +G+ ++ M +K+ P EH+G +V+L RAG VE+A I
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Query: 443 ITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAG 502
+ + + + WG++L +C + E+A +L LEP+ E + LL IY G
Sbjct: 528 VQKKMPMRPS-QSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVG 586
Query: 503 RLEDMERVRMMLVDRGL 519
R ++ R + +RG+
Sbjct: 587 RWGYSDKTREAMENRGV 603
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 180/362 (49%), Gaps = 51/362 (14%)
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+ + F +N++IS + ++ LY M+ V PD TF ++K + L EV ++
Sbjct: 97 NPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLS--EV-KQ 151
Query: 210 VHRHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG 268
+H H + +G + G L N+LV Y + G+ A K+F RM D S+N M+ Y G
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG 211
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEW--NLSI 323
+EA+ + +MV +G +PD ++ ++L +S + LG +HGW+ RRG + NL +
Sbjct: 212 FSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLIL 271
Query: 324 ANSL-------------------------------IIAYSKHGRLDTARWLFNLMPERDV 352
+N+L ++ + + G ++ A+ +F+ MP+RD+
Sbjct: 272 SNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDL 331
Query: 353 VSWNSIISAH----CKHREALALFEQMEEA-GVKPDKITFVSLLSACAYLGLVNDGVRLY 407
VSWNS++ + C R LF +M VKPD++T VSL+S A G ++ G ++
Sbjct: 332 VSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVH 391
Query: 408 ALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLH 467
L+ + ++K ++++Y + G++E+A+ + + A W +++ H
Sbjct: 392 GLVI-RLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVA---LWTSMITGLAFH 447
Query: 468 GS 469
G+
Sbjct: 448 GN 449
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 142/289 (49%), Gaps = 19/289 (6%)
Query: 117 RKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAI-AL 175
+K++ + +V + G ME A +FDQM +RD + WNSL+ GY++ G + L
Sbjct: 297 KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVS--WNSLLFGYSKKGCDQRTVREL 354
Query: 176 YFQM-VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYP 234
+++M + E V+PD T ++ A G L G VH +R D +AL+DMY
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYC 414
Query: 235 KCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSIST 294
KCG I +A +F +D W SM+T HG +A+ F +M EG P+ V++
Sbjct: 415 KCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLA 474
Query: 295 ILTGVSSMDL---GVQIHGWVIRR-GVEWNLSIANSLIIAYSKHGRLDTARWLFN-LMPE 349
+LT S L G+ + + + G + SL+ + GR++ A+ + MP
Sbjct: 475 VLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPM 534
Query: 350 RDVVS-WNSIISAHCKHRE-----ALALFEQMEEAGVKPDKITFVSLLS 392
R S W SI+SA C+ E LAL E ++ ++P+K LLS
Sbjct: 535 RPSQSMWGSILSA-CRGGEDIETAELALTELLK---LEPEKEGGYVLLS 579
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 231/448 (51%), Gaps = 54/448 (12%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
D + +L+ C G Q+H L L +V V + LV +Y GY E A +
Sbjct: 139 DKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVL 198
Query: 144 DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGL 203
D+M RDA + WNSL+S Y + GL D+A AL+ +M E VE
Sbjct: 199 DRMPVRDAVS--WNSLLSAYLEKGLVDEARALFDEMEERNVE------------------ 238
Query: 204 LEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTA 263
N ++ Y G + +A+++F+ M RD VSWN+M+TA
Sbjct: 239 ---------------------SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTA 277
Query: 264 YVHHGLEVEAMDTFCQMVLEGC-KPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEW 319
Y H G E ++ F +M+ + KPD ++ ++L+ +S+ G +H ++ + G+E
Sbjct: 278 YAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEI 337
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIIS---AHCKHREALALFEQME 376
+A +L+ YSK G++D A +F +RDV +WNSIIS H ++AL +F +M
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
G KP+ ITF+ +LSAC ++G+++ +L+ +M+ Y+++P +EH+GCMV+L GR G +
Sbjct: 398 YEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKI 457
Query: 437 EKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMK 496
E+A ++ + EA+ + +LL +C G + E AN+L +L + +A +
Sbjct: 458 EEAEELVNEIPADEASILLE--SLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSN 515
Query: 497 IYENAGRLEDM----ERVRMMLVDRGLD 520
+Y + GR E + +R V+R LD
Sbjct: 516 LYASDGRWEKVIDGRRNMRAERVNRSLD 543
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 186/386 (48%), Gaps = 51/386 (13%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASF---GYMEDAHDLFDQMS 147
+L R++++ Q H + L + SKLV A+ + AH + +++
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
+ F NS+I YA + A+ ++ +M+ V PD ++F VLK CA E G
Sbjct: 102 S--PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEG 159
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
++H +++G D N LV++Y + G+ ARK+ +RM RD+VSWNS+L+AY+
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEK 219
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVE-WNLSIANS 326
GL EA F +M R VE WN
Sbjct: 220 GLVDEARALFDEME--------------------------------ERNVESWNF----- 242
Query: 327 LIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQM-EEAGVKP 382
+I Y+ G + A+ +F+ MP RDVVSWN++++A+ + E L +F +M +++ KP
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 383 DKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
D T VS+LSACA LG ++ G ++ + +K+ I+ +V++Y + G ++KA +
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYI-DKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 443 ITDGIGSEAAGPTQWGALLYSCYLHG 468
+ + W +++ +HG
Sbjct: 362 FR---ATSKRDVSTWNSIISDLSVHG 384
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 212/377 (56%), Gaps = 9/377 (2%)
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
D F +N++I GY + +++A+ Y +M++ G EPD FT+P +LK C L + G++
Sbjct: 94 DPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQ 153
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
+H + G D N+L++MY +CG + + +F ++ + + SW+SM++A G+
Sbjct: 154 IHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGM 213
Query: 270 EVEAMDTFCQMV----LEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIAN 325
E + F M L+ + VS +++LG+ IHG+++R E N+ +
Sbjct: 214 WSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQT 273
Query: 326 SLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKP 382
SL+ Y K G LD A +F M +R+ ++++++IS H E AL +F +M + G++P
Sbjct: 274 SLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEP 333
Query: 383 DKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
D + +VS+L+AC++ GLV +G R++A M ++ K++P EH+GC+V+L GRAG++E+A
Sbjct: 334 DHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALET 393
Query: 443 ITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAG 502
I I E W L C + ++ +G+IAA +L L N ++ L+ +Y
Sbjct: 394 I-QSIPIE-KNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQ 451
Query: 503 RLEDMERVRMMLVDRGL 519
+D+ R R + +GL
Sbjct: 452 MWDDVARTRTEIAIKGL 468
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 159/313 (50%), Gaps = 9/313 (2%)
Query: 65 AIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTS 124
+ E+ L +++G D Y LL+ C R ++IR G Q+H + + L +V V +
Sbjct: 112 SFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQN 171
Query: 125 KLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE-G 183
L+ +Y G ME + +F+++ + A++ W+S++S A +G++ + + L+ M E
Sbjct: 172 SLINMYGRCGEMELSSAVFEKLESKTAAS--WSSMVSARAGMGMWSECLLLFRGMCSETN 229
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
++ + L CA G L +G +H +R + + +LVDMY KCG + KA
Sbjct: 230 LKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKAL 289
Query: 244 KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD 303
IF +M +R+++++++M++ HG A+ F +M+ EG +PD V ++L S
Sbjct: 290 HIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSG 349
Query: 304 L---GVQIHGWVIRRG-VEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSI 358
L G ++ +++ G VE L+ + G L+ A +P E++ V W +
Sbjct: 350 LVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTF 409
Query: 359 ISAHCKHREALAL 371
+S C+ R+ + L
Sbjct: 410 LS-QCRVRQNIEL 421
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 150/481 (31%), Positives = 246/481 (51%), Gaps = 44/481 (9%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+G+ D +L++ R + + G +VH L + V++ L+ +YAS G +E
Sbjct: 40 QGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEI 99
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE-GVEPDLFTFPRVLKV 197
H +FD+M QRD WN LIS Y G ++DAI ++ +M +E ++ D T L
Sbjct: 100 THKVFDEMPQRD--VVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSA 157
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR------ 251
C+ L LE+GE ++R V + +G NALVDM+ KCG + KAR +F+ M
Sbjct: 158 CSALKNLEIGERIYRFVVTEFEMSVRIG-NALVDMFCKCGCLDKARAVFDSMRDKNVKCW 216
Query: 252 -------------------------RDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCK 286
+D V W +M+ YV EA++ F M G +
Sbjct: 217 TSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Query: 287 PDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWL 343
PD + ++LTG + +++ G IHG++ V + + +L+ Y+K G ++TA +
Sbjct: 277 PDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEV 336
Query: 344 FNLMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLV 400
F + ERD SW S+I + + AL L+ +ME GV+ D ITFV++L+AC + G V
Sbjct: 337 FYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFV 396
Query: 401 NDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD--GIGSEAAGPTQWG 458
+G +++ MTE++ ++P EH C+++L RAG++++A +I G E P +
Sbjct: 397 AEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPV-YC 455
Query: 459 ALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRG 518
+LL + +G+V I E A KL +E + LL +Y +A R ED+ VR + D G
Sbjct: 456 SLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLG 515
Query: 519 L 519
+
Sbjct: 516 I 516
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 174/356 (48%), Gaps = 45/356 (12%)
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVH 211
S +N ++ A + +AL+ ++ +G+ PD FT P VLK L + GE+VH
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 212 RHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEV 271
+AV+AG D N+L+ MY G I K+F+ M +RD VSWN ++++YV +G
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 272 EAMDTFCQMVLE-GCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIAN-- 325
+A+ F +M E K D +I + L+ S+ +++G +I+ +V+ E ++ I N
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNAL 188
Query: 326 -----------------------------SLIIAYSKHGRLDTARWLFNLMPERDVVSWN 356
S++ Y GR+D AR LF P +DVV W
Sbjct: 189 VDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWT 248
Query: 357 SIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE- 412
++++ + + EAL LF M+ AG++PD VSLL+ CA G + G ++ + E
Sbjct: 249 AMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN 308
Query: 413 KYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
+ + ++ +V++Y + G +E A + + + A W +L+Y ++G
Sbjct: 309 RVTVDKVV--GTALVDMYAKCGCIETALEVFYEIKERDTA---SWTSLIYGLAMNG 359
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 203/370 (54%), Gaps = 10/370 (2%)
Query: 153 AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHR 212
AF WN+++ Y + DAI +Y MV V PD ++ P V+K + +G+E+H
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 213 HAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVE 272
AVR GF D + + +Y K G ARK+F+ R SWN+++ H G E
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 273 AMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIRRGVE--WNLSIANSL 327
A++ F M G +PD VS++ G+ + L Q+H V++ E ++ + NSL
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 328 IIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDK 384
I Y K GR+D A +F M +R+VVSW+S+I +A+ EAL F QM E GV+P+K
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
ITFV +LSAC + GLV +G +A+M +++++P + H+GC+V+L R G +++A ++
Sbjct: 322 ITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Query: 445 DGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRL 504
+ WG L+ C G V + E A + +LEP N+ + +L +Y G
Sbjct: 382 E--MPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMW 439
Query: 505 EDMERVRMML 514
+D+ERVR ++
Sbjct: 440 KDVERVRKLM 449
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 29/308 (9%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
S + LY G E+A +FD+ +R + WN++I G G ++A+ ++ M G
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGS--WNAIIGGLNHAGRANEAVEMFVDMKRSG 213
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF--GNDGLGLNALVDMYPKCGHIVK 241
+EPD FT V C GLG L + ++H+ ++A +D + LN+L+DMY KCG +
Sbjct: 214 LEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDL 273
Query: 242 ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS 301
A IF M +R+ VSW+SM+ Y +G +EA++ F QM G +P+ ++ +L+
Sbjct: 274 ASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSAC-- 331
Query: 302 MDLGVQIHGWVIRRG------------VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE 349
+HG ++ G +E LS ++ S+ G+L A+ + MP
Sbjct: 332 ------VHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPM 385
Query: 350 R-DVVSWNSIISAHCKHREALALFEQMEEAGVKPDKIT---FVSLLSACAYLGLVNDGVR 405
+ +V+ W ++ C+ + + E + V+ + +V L + A G+ D R
Sbjct: 386 KPNVMVWGCLMGG-CEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 406 LYALMTEK 413
+ LM K
Sbjct: 445 VRKLMKTK 452
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLI--PTVLLRKNVGVTSKLVRLYASFGYME 137
G+ D S+ +C + Q+H+ + + ++ + + L+ +Y G M+
Sbjct: 213 GLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMD 272
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
A +F++M QR+ + W+S+I GYA G +A+ + QM E GV P+ TF VL
Sbjct: 273 LASHIFEEMRQRNVVS--WSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSA 330
Query: 198 CAGLGLLEVGEEVHRHAVRAGFG-NDGLG-LNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
C GL+E G + + +++ F GL +VD+ + G + +A+K+ M + +V
Sbjct: 331 CVHGGLVEEG-KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNV 389
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 238/452 (52%), Gaps = 14/452 (3%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV-GVTSK 125
E+ L+ I+ GI + S+L +C IR G VH L N ++
Sbjct: 285 EKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLA 344
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
LV LYA G + D + +S R+ A WNSLIS YA G+ A+ L+ QMV + ++
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVA--WNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
PD FT + C GL+ +G+++H H +R +D N+L+DMY K G + A +
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTV 461
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMV---LEGCKPDFVSISTILTGVSSM 302
FN++ R V+WNSML + +G VEA+ F M LE + F+++ + + S+
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Query: 303 DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH 362
+ G +H +I G++ +L +LI Y+K G L+ A +F M R +VSW+S+I+A+
Sbjct: 522 EKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 580
Query: 363 CKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
H A++ F QM E+G KP+++ F+++LSAC + G V +G + LM + + + P
Sbjct: 581 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPN 639
Query: 420 MEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANK 479
EH C ++L R+G +++AY I + A + WG+L+ C +H + I + N
Sbjct: 640 SEHFACFIDLLSRSGDLKEAYRTIKE--MPFLADASVWGSLVNGCRIHQKMDIIKAIKND 697
Query: 480 LFDLEPDNEHNFALLMKIYENAGRLEDMERVR 511
L D+ D+ + LL IY G E+ R+R
Sbjct: 698 LSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLR 729
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 249/500 (49%), Gaps = 39/500 (7%)
Query: 46 PKSTPLLIHQQPYPQTKHQAI-----------EQVLKDIEASIEKGIRIDPEIYASLLET 94
P S+ L+ PYP + + + + + + +I ++ S+L
Sbjct: 50 PDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRA 109
Query: 95 CYRSQA-IRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASA 153
C S+ + G +VH I + + + + L+ +Y G + DA +FD M RD A
Sbjct: 110 CAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVA 169
Query: 154 FPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRH 213
W++L+S + G A+ ++ MV++GVEPD T V++ CA LG L + VH
Sbjct: 170 --WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQ 227
Query: 214 AVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEA 273
R F D N+L+ MY KCG ++ + +IF ++ ++++VSW +M+++Y +A
Sbjct: 228 ITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKA 287
Query: 274 MDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNL-SIANSLII 329
+ +F +M+ G +P+ V++ ++L+ + L G +HG+ +RR ++ N S++ +L+
Sbjct: 288 LRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVE 347
Query: 330 AYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR----EALALFEQMEEAGVKPDKI 385
Y++ G+L + ++ +R++V+WNS+IS + HR +AL LF QM +KPD
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLY-AHRGMVIQALGLFRQMVTQRIKPDAF 406
Query: 386 TFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
T S +SAC GLV G +++ + +++ ++++Y ++G V+ A ++
Sbjct: 407 TLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNS--LIDMYSKSGSVDSASTVFNQ 464
Query: 446 GIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFD------LEPDNEHNFALLMKIYE 499
+ W ++L +G+ + A LFD LE NE F +++
Sbjct: 465 ---IKHRSVVTWNSMLCGFSQNGN----SVEAISLFDYMYHSYLEM-NEVTFLAVIQACS 516
Query: 500 NAGRLEDMERVRMMLVDRGL 519
+ G LE + V L+ GL
Sbjct: 517 SIGSLEKGKWVHHKLIISGL 536
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 227/418 (54%), Gaps = 30/418 (7%)
Query: 125 KLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQ-LGLYDDAIALYFQMVEEG 183
K+++L +SF + A +FD + + S+F WN+LI A + ++A LY +M+E G
Sbjct: 88 KILQLSSSFSDVNYAFRVFDSI--ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERG 145
Query: 184 -VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKA 242
PD TFP VLK CA + G++VH V+ GFG D N L+ +Y CG + A
Sbjct: 146 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA 205
Query: 243 RKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT---GV 299
RK+F+ M R VSWNSM+ A V G A+ F +M +PD ++ ++L+ G+
Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGL 264
Query: 300 SSMDLGVQIHGWVIRR---GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWN 356
S+ LG H +++R+ V ++ + NSLI Y K G L A +F M +RD+ SWN
Sbjct: 265 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 324
Query: 357 SII---SAHCKHREALALFEQM--EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
++I + H + EA+ F++M + V+P+ +TFV LL AC + G VN G + + +M
Sbjct: 325 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 384
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHG- 468
Y I+P +EH+GC+V+L RAG + +A D + S P W +LL +C G
Sbjct: 385 RDYCIEPALEHYGCIVDLIARAGYITEA----IDMVMSMPMKPDAVIWRSLLDACCKKGA 440
Query: 469 SVAIGEIAANKLFDLEPDNEHN-------FALLMKIYENAGRLEDMERVRMMLVDRGL 519
SV + E A + + DNE + + LL ++Y +A R D+ VR ++ + G+
Sbjct: 441 SVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGI 498
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 152/313 (48%), Gaps = 15/313 (4%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
D + +L+ C G QVH I +V V + L+ LY S G ++ A +F
Sbjct: 150 DKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVF 209
Query: 144 DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGL 203
D+M +R S WNS+I + G YD A+ L+ +M + EPD +T VL CAGLG
Sbjct: 210 DEMPER--SLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGS 266
Query: 204 LEVGEEVHRHAVR---AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSM 260
L +G H +R D L N+L++MY KCG + A ++F M +RD SWN+M
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326
Query: 261 LTAYVHHGLEVEAMDTFCQMV--LEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRR 315
+ + HG EAM+ F +MV E +P+ V+ +L + ++ G Q ++R
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 316 -GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER-DVVSWNSIISAHCKHREALALFE 373
+E L ++ ++ G + A + MP + D V W S++ A CK ++ L E
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Query: 374 QMEE--AGVKPDK 384
++ G K D
Sbjct: 447 EIARNIIGTKEDN 459
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 232/439 (52%), Gaps = 30/439 (6%)
Query: 87 IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM 146
++ +L+TCY +L VGV L++LY G M DA +F++M
Sbjct: 269 VHGQILKTCY------------------VLDPRVGVG--LLQLYTQLGDMSDAFKVFNEM 308
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEV 206
+ D PW+ +I+ + Q G ++A+ L+ +M E V P+ FT +L CA +
Sbjct: 309 PKNDV--VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL 366
Query: 207 GEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVH 266
GE++H V+ GF D NAL+D+Y KC + A K+F + ++ VSWN+++ Y +
Sbjct: 367 GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYEN 426
Query: 267 HGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRGVEWNLSI 323
G +A F + + V+ S+ L ++SMDLGVQ+HG I+ +++
Sbjct: 427 LGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAV 486
Query: 324 ANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGV 380
+NSLI Y+K G + A+ +FN M DV SWN++IS + H R+AL + + M++
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDC 546
Query: 381 KPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAY 440
KP+ +TF+ +LS C+ GL++ G + M + I+P +EH+ CMV L GR+G ++KA
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAM 606
Query: 441 SIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYEN 500
+I +GI E + W A+L + + +A ++ + P +E + L+ +Y
Sbjct: 607 KLI-EGIPYEPS-VMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAG 664
Query: 501 AGRLEDMERVRMMLVDRGL 519
A + ++ +R + + G+
Sbjct: 665 AKQWANVASIRKSMKEMGV 683
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 218/451 (48%), Gaps = 16/451 (3%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+G ++P ++ S L+ +H I + N V + L+ Y+ G ++
Sbjct: 140 EGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDS 199
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A +F+ + +D W ++S Y + G ++D++ L M G P+ +TF LK
Sbjct: 200 ARTVFEGILCKDIVV--WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKAS 257
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
GLG + + VH ++ + D L+ +Y + G + A K+FN M + D V W+
Sbjct: 258 IGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWS 317
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRR 315
M+ + +G EA+D F +M P+ ++S+IL G + LG Q+HG V++
Sbjct: 318 FMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV 377
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALF 372
G + ++ ++N+LI Y+K ++DTA LF + ++ VSWN++I + E A ++F
Sbjct: 378 GFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMF 437
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
+ V ++TF S L ACA L ++ GV+++ L + K + + ++++Y +
Sbjct: 438 REALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LIDMYAK 496
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQWGALL--YSCYLHGSVAIGEIAANKLFDLEPDNEHN 490
G ++ A S+ + E W AL+ YS + G A+ + K D +P N
Sbjct: 497 CGDIKFAQSVFNE---METIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKP-NGLT 552
Query: 491 FALLMKIYENAGRLED-MERVRMMLVDRGLD 520
F ++ NAG ++ E M+ D G++
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESMIRDHGIE 583
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 171/354 (48%), Gaps = 12/354 (3%)
Query: 65 AIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTS 124
+++ D+E+S +D Y ++L C + +H I ++ T+
Sbjct: 29 SVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATN 88
Query: 125 KLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGV 184
L+ Y G+ +DA +LFD+M +R+ +F +L GYA D I LY ++ EG
Sbjct: 89 ILLNAYVKAGFDKDALNLFDEMPERNNVSFV--TLAQGYA----CQDPIGLYSRLHREGH 142
Query: 185 EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARK 244
E + F LK+ L E+ +H V+ G+ ++ AL++ Y CG + AR
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 245 IFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT---GVSS 301
+F + +D V W +++ YV +G +++ M + G P+ + T L G+ +
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 302 MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA 361
D +HG +++ + + L+ Y++ G + A +FN MP+ DVV W+ +I+
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 362 HCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE 412
C++ EA+ LF +M EA V P++ T S+L+ CA G +L+ L+ +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 76 SIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGY 135
++ + + ++S L C ++ G QVH L K V V++ L+ +YA G
Sbjct: 440 ALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGD 499
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
++ A +F++M D ++ WN+LISGY+ GL A+ + M + +P+ TF VL
Sbjct: 500 IKFAQSVFNEMETIDVAS--WNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVL 557
Query: 196 KVCAGLGLLEVGEEVHRHAVRA-GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
C+ GL++ G+E +R G +V + + G + KA K+ + S
Sbjct: 558 SGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPS 617
Query: 255 VS-WNSMLTAYVHHGLE 270
V W +ML+A ++ E
Sbjct: 618 VMIWRAMLSASMNQNNE 634
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 239/455 (52%), Gaps = 23/455 (5%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E + + Y +L+ C + A+ G H + + + + + L+ +Y G +
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDIS 294
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
+A +F++ S D W ++I GY G ++A++L+ +M ++P+ T VL
Sbjct: 295 NARRVFNEHSHVDL--VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSG 352
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
C + LE+G VH +++ G + + NALV MY KC A+ +F +D V+W
Sbjct: 353 CGLIENLELGRSVHGLSIKVGIWDTNVA-NALVHMYAKCYQNRDAKYVFEMESEKDIVAW 411
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIR 314
NS+++ + +G EA+ F +M E P+ V+++++ + +S+ +G +H + ++
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK 471
Query: 315 RG--VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---AL 369
G ++ + +L+ Y+K G +AR +F+ + E++ ++W+++I + K + +L
Sbjct: 472 LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSL 531
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
LFE+M + KP++ TF S+LSAC + G+VN+G + ++ M + Y P +H+ CMV++
Sbjct: 532 ELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDM 591
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQ-----WGALLYSCYLHGSVAIGEIAANKLFDLE 484
RAG +E+A II P Q +GA L+ C +H +GEI K+ DL
Sbjct: 592 LARAGELEQALDII-------EKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLH 644
Query: 485 PDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
PD+ + L+ +Y + GR + VR ++ RGL
Sbjct: 645 PDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGL 679
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 217/401 (54%), Gaps = 14/401 (3%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLV 127
+V+K + ++ G R D +++ L+ C Q + +G ++H + V NV V + L+
Sbjct: 125 EVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLL 183
Query: 128 RLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPD 187
+YA G ++ AH +F+ ++ R+ W S+I+GY + L ++ + L+ +M E V +
Sbjct: 184 DMYAKCGEIKSAHKVFNDITLRNVVC--WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 188 LFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN 247
+T+ ++ C L L G+ H V++G + +L+DMY KCG I AR++FN
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 248 RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDL 304
D V W +M+ Y H+G EA+ F +M KP+ V+I+++L+G + +++L
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
G +HG I+ G+ W+ ++AN+L+ Y+K + A+++F + E+D+V+WNSIIS +
Sbjct: 362 GRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 365 H---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIME 421
+ EAL LF +M V P+ +T SL SACA LG + G L+A + +
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 422 HHG-CMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL 461
H G +++ Y + G + A +I D I E W A++
Sbjct: 481 HVGTALLDFYAKCGDPQSA-RLIFDTI--EEKNTITWSAMI 518
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 160/313 (51%), Gaps = 12/313 (3%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
LL C ++R Q H ++ L ++ + +KLV LY FGY +DA +FDQ+ + D
Sbjct: 50 LLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 151 ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
+ W ++ Y + + LY +++ G D F + LK C L L+ G+++
Sbjct: 107 --FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 211 HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
H V+ D + L L+DMY KCG I A K+FN + R+ V W SM+ YV + L
Sbjct: 165 HCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRGVEWNLSIANSL 327
E + F +M + + T++ T +S++ G HG +++ G+E + + SL
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 328 IIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDK 384
+ Y K G + AR +FN D+V W ++I + + EAL+LF++M+ +KP+
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 385 ITFVSLLSACAYL 397
+T S+LS C +
Sbjct: 344 VTIASVLSGCGLI 356
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 295 ILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
+L+ +++D Q HG + G+ ++SIA L+ Y G AR +F+ +PE D
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 355 WNSIISAHCKHREA---LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
W ++ +C ++E+ + L++ + + G + D I F L AC L +++G +++ +
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
+ ++ ++++Y + G ++ A+ + D
Sbjct: 170 KVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFND 201
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 219/399 (54%), Gaps = 11/399 (2%)
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE 181
V++ L+ Y+ M++A LF++ + WN++++GY Q + L+ M +
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFER---HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 182 EGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
+G D FT V K C L + G++VH +A+++G+ D + ++DMY KCG +
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 242 ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG--- 298
A+ F+ + D V+W +M++ + +G E A F QM L G PD +I+T+
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 299 VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI 358
+++++ G QIH ++ + + SL+ Y+K G +D A LF + ++ +WN++
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 359 ISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYK 415
+ +H +E L LF+QM+ G+KPDK+TF+ +LSAC++ GLV++ + M Y
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 416 IKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI 475
IKP +EH+ C+ + GRAG+V++A ++I S A + + LL +C + G G+
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIES--MSMEASASMYRTLLAACRVQGDTETGKR 808
Query: 476 AANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMML 514
A KL +LEP + + LL +Y A + ++M+ R M+
Sbjct: 809 VATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMM 847
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 202/408 (49%), Gaps = 16/408 (3%)
Query: 69 VLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVR 128
+LK +E + D + +L T + ++ G QVH + + L + V++ L+
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358
Query: 129 LYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDL 188
+Y A +FD MS+RD WNS+I+G AQ GL +A+ L+ Q++ G++PD
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDL--ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQ 416
Query: 189 FTFPRVLKVCAGLGL-LEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN 247
+T VLK + L L + ++VH HA++ +D AL+D Y + + +A +F
Sbjct: 417 YTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE 476
Query: 248 RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDL 304
R H D V+WN+M+ Y + + F M +G + D +++T+ +++
Sbjct: 477 R-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
G Q+H + I+ G + +L +++ ++ Y K G + A++ F+ +P D V+W ++IS +
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 365 HRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA-LMTEKYKIKPIM 420
+ E A +F QM GV PD+ T +L A + L + G +++A + P +
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFV 655
Query: 421 EHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
+V++Y + G ++ AY + E T W A+L HG
Sbjct: 656 --GTSLVDMYAKCGSIDDAYCLFKR---IEMMNITAWNAMLVGLAQHG 698
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 14/262 (5%)
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVR 216
N +S Y G Y + + MVE VE D TF +L + L +G++VH A++
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 217 AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDT 276
G N+L++MY K AR +F+ M RD +SWNS++ +GLEVEA+
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 277 FCQMVLEGCKPDFVSISTILTGVSSMDLGV----QIHGWVIRRGVEWNLSIANSLIIAYS 332
F Q++ G KPD +++++L SS+ G+ Q+H I+ + ++ +LI AYS
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 333 KHGRLDTARWLFNLMPER---DVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKIT 386
++ + A LF ER D+V+WN++++ + + + L LF M + G + D T
Sbjct: 464 RNRCMKEAEILF----ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 387 FVSLLSACAYLGLVNDGVRLYA 408
++ C +L +N G +++A
Sbjct: 520 LATVFKTCGFLFAINQGKQVHA 541
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
++G R D A++ +TC AI G QVH ++ V+S ++ +Y G M
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
A FD + D A W ++ISG + G + A ++ QM GV PD FT + K
Sbjct: 570 AAQFAFDSIPVPDDVA--WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
+ L LE G ++H +A++ ND +LVDMY KCG I A +F R+ + +W
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
N+ML HG E + F QM G KPD V+ +L+ S
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 143/314 (45%), Gaps = 42/314 (13%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
+L+ C S + H + L + V LV +Y FG +++ LF++M RD
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 151 ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
WN ++ Y ++G ++AI L G+ P+ T + ++ G++
Sbjct: 211 --VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARIS--------GDDS 260
Query: 211 HRHAVRA-GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
V++ GND ++ + IF N L+ Y+H G
Sbjct: 261 DAGQVKSFANGNDASSVSEI---------------IFR----------NKGLSEYLHSGQ 295
Query: 270 EVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRGVEWNLSIANS 326
+ F MV + D V+ +L V S+ LG Q+H ++ G++ L+++NS
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 327 LIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPD 383
LI Y K + AR +F+ M ERD++SWNS+I+ ++ EA+ LF Q+ G+KPD
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 384 KITFVSLLSACAYL 397
+ T S+L A + L
Sbjct: 416 QYTMTSVLKAASSL 429
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 31/183 (16%)
Query: 226 LNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
+N L+ MY KCG + AR++F++M RD VSWNS+L AY + V+E
Sbjct: 77 INNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSS----------ECVVENI 126
Query: 286 KPDFVSISTILTGV---SSMDLGVQI---------------HGWVIRRGVEWNLSIANSL 327
+ F+ + V S M L + HG+ + G++ + +A +L
Sbjct: 127 QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGAL 186
Query: 328 IIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDK 384
+ Y K G++ + LF MP RDVV WN ++ A+ + EA+ L +G+ P++
Sbjct: 187 VNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNE 246
Query: 385 ITF 387
IT
Sbjct: 247 ITL 249
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 7/207 (3%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
L S + G H I T + + L+ +Y+ G + A +FD+M RD
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 151 ASAFPWNSLISGYAQ-----LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLE 205
+ WNS+++ YAQ + A L+ + ++ V T +LK+C G +
Sbjct: 105 LVS--WNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 206 VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
E H +A + G D ALV++Y K G + + + +F M RD V WN ML AY+
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSI 292
G + EA+D G P+ +++
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE--------ALALFEQ 374
+ N+LI YSK G L AR +F+ MP+RD+VSWNSI++A+ + E A LF
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 375 MEEAGVKPDKITFVSLLSACAYLGLV--NDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
+ + V ++T +L C + G V ++ YA K + G +VN+Y +
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC---KIGLDGDEFVAGALVNIYLK 192
Query: 433 AGMVEK 438
G V++
Sbjct: 193 FGKVKE 198
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 247/447 (55%), Gaps = 14/447 (3%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGY- 135
+++G + +S+L++C + + +G+ VH ++ + + ++ V + ++ +YA+
Sbjct: 103 VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVT 162
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
ME A +F + ++ W +LI+G+ LG + +Y QM+ E E + +
Sbjct: 163 MEAACLIFRDIKVKND--VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
+ A + + G+++H ++ GF ++ +N+++D+Y +CG++ +A+ F+ M +D +
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWV 312
+WN++++ + EA+ F + +G P+ F S+ +++++ G Q+HG +
Sbjct: 281 TWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRL-DTARWLFNLMPERDVVSWNSIISAHCKH---REA 368
RRG N+ +AN+LI Y+K G + D+ R ++ R++VSW S++ + H EA
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
+ LF++M +G++PD+I F+++LSAC + GLV G++ + +M +Y I P + + C+V+
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459
Query: 429 LYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVA-IGEIAANKLFDLEPDN 487
L GRAG + +AY ++ + WGA+L +C H I +AA K+ +L+P
Sbjct: 460 LLGRAGKIGEAYELVER--MPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKM 517
Query: 488 EHNFALLMKIYENAGRLEDMERVRMML 514
+ +L IY G+ D RVR M+
Sbjct: 518 VGTYVMLSYIYAAEGKWVDFARVRKMM 544
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 204/412 (49%), Gaps = 33/412 (8%)
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE 181
+ + L+ Y G +E+A LFD+M RD A W ++I+GYA A + +MV+
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVA--WTAMITGYASSNYNARAWECFHEMVK 104
Query: 182 EGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
+G P+ FT VLK C + +L G VH V+ G NA+++MY C ++
Sbjct: 105 QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 242 AR-KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
A IF + ++ V+W +++T + H G + + + QM+LE + I+ + +
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 301 SMD---LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNS 357
S+D G QIH VI+RG + NL + NS++ Y + G L A+ F+ M ++D+++WN+
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNT 284
Query: 358 IIS--AHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYK 415
+IS EAL +F++ E G P+ TF SL++ACA + +N G +L+ + +
Sbjct: 285 LISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 416 IKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI 475
K + E ++++Y + G + + + + + + W +++ HG A
Sbjct: 345 NKNV-ELANALIDMYAKCGNIPDSQRVFGEIV--DRRNLVSWTSMMIGYGSHGYGA---- 397
Query: 476 AANKLFD------LEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLDY 521
A +LFD + PD F ++ +AG LV++GL Y
Sbjct: 398 EAVELFDKMVSSGIRPD-RIVFMAVLSACRHAG-----------LVEKGLKY 437
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 219/426 (51%), Gaps = 16/426 (3%)
Query: 104 GSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGY 163
G Q+H L +V V +Y +DA LFD++ +R+ WN+ IS
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET--WNAFISNS 184
Query: 164 AQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDG 223
G +AI + + P+ TF L C+ L +G ++H +R+GF D
Sbjct: 185 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 244
Query: 224 LGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE 283
N L+D Y KC I + IF M +++VSW S++ AYV + + +A + + +
Sbjct: 245 SVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 304
Query: 284 GCKPDFVSISTILT---GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTA 340
+ IS++L+ G++ ++LG IH ++ VE + + ++L+ Y K G ++ +
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 341 RWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGV--KPDKITFVSLLSACA 395
F+ MPE+++V+ NS+I + + ALALFE+M G P+ +TFVSLLSAC+
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 396 YLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPT 455
G V +G++++ M Y I+P EH+ C+V++ GRAGMVE+AY I PT
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIK----KMPIQPT 480
Query: 456 --QWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMM 513
WGAL +C +HG +G +AA LF L+P + N LL + AGR + VR
Sbjct: 481 ISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540
Query: 514 LVDRGL 519
L G+
Sbjct: 541 LKGVGI 546
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 182/360 (50%), Gaps = 18/360 (5%)
Query: 91 LLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
LL+ + ++R G VH R++ T+ + + L+ +Y+ + E A + R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+ + W SLISG AQ G + A+ +F+M EGV P+ FTFP K A L L G++
Sbjct: 72 NVVS--WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
+H AV+ G D + DMY K ARK+F+ + R+ +WN+ ++ V G
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 270 EVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANS 326
EA++ F + P+ ++ L S ++LG+Q+HG V+R G + ++S+ N
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 327 LIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPD 383
LI Y K ++ ++ +F M ++ VSW S+++A+ ++ E A L+ + + V+
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 384 KITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH----GCMVNLYGRAGMVEKA 439
S+LSACA + + G ++A + +K +E +V++YG+ G +E +
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHA-----HAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 8/187 (4%)
Query: 87 IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM 146
+ +S+L C + G +H + + + V S LV +Y G +ED+ FD+M
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGV--EPDLFTFPRVLKVCAGLGLL 204
+++ NSLI GYA G D A+AL+ +M G P+ TF +L C+ G +
Sbjct: 372 PEKN--LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429
Query: 205 EVGEEVHRHAVRAGFGND--GLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS-WNSML 261
E G ++ ++R+ +G + + +VDM + G + +A + +M + ++S W ++
Sbjct: 430 ENGMKIF-DSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 262 TAYVHHG 268
A HG
Sbjct: 489 NACRMHG 495
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 237/451 (52%), Gaps = 14/451 (3%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+GI + +++ L+ C A+ G Q+H + V V + LV +Y+ G + +
Sbjct: 101 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 160
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE--PDLFTFPRVLK 196
A +F ++ R S WN++I+G+ G A+ + M E ++ PD FT +LK
Sbjct: 161 AEKVFRRIVDR--SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 218
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFG--NDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
C+ G++ G+++H VR+GF + +LVD+Y KCG++ ARK F+++ +
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGW 311
+SW+S++ Y G VEAM F ++ + D ++S+I+ + L G Q+
Sbjct: 279 ISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REA 368
++ S+ NS++ Y K G +D A F M +DV+SW +I+ + KH +++
Sbjct: 339 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 398
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
+ +F +M ++PD++ ++++LSAC++ G++ +G L++ + E + IKP +EH+ C+V+
Sbjct: 399 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 458
Query: 429 LYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNE 488
L GRAG +++A +I G W LL C +HG + +G+ L ++ N
Sbjct: 459 LLGRAGRLKEAKHLIDTMPIKPNVGI--WQTLLSLCRVHGDIELGKEVGKILLRIDAKNP 516
Query: 489 HNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
N+ ++ +Y AG + R + +GL
Sbjct: 517 ANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 229/464 (49%), Gaps = 53/464 (11%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
S+L C R G QVH + N+ ++ L+ +Y A+ +FD M +R
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+ + W++L+SG+ G +++L+ +M +G+ P+ FTF LK C L LE G +
Sbjct: 71 NVVS--WSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
+H ++ GF N+LVDMY KCG I +A K+F R+ R +SWN+M+ +VH G
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 270 EVEAMDTFCQMVLEGCK--PDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEW--NLS 322
+A+DTF M K PD +++++L SS + G QIHG+++R G + +
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALFEQMEEAG 379
I SL+ Y K G L +AR F+ + E+ ++SW+S+I + + EA+ LF++++E
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH--GCMVNLYGRAGMVE 437
+ D S++ A L+ G ++ AL K+ +E +V++Y + G+V+
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAV---KLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 438 KA--------------YSIITDGIGSEAAGPTQ------------------WGALLYSCY 465
+A ++++ G G G + A+L +C
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 466 LHGSVAIGEIAANKLFD---LEPDNEHNFALLMKIYENAGRLED 506
G + GE +KL + ++P EH +A ++ + AGRL++
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEH-YACVVDLLGRAGRLKE 468
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 149/294 (50%), Gaps = 11/294 (3%)
Query: 74 EASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLR--KNVGVTSKLVRLYA 131
EA+I++ R D SLL+ C + I G Q+H + + +T LV LY
Sbjct: 201 EANIKE--RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYV 258
Query: 132 SFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF 191
GY+ A FDQ+ ++ + W+SLI GYAQ G + +A+ L+ ++ E + D F
Sbjct: 259 KCGYLFSARKAFDQIKEK--TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFAL 316
Query: 192 PRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR 251
++ V A LL G+++ AV+ G + LN++VDMY KCG + +A K F M
Sbjct: 317 SSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL 376
Query: 252 RDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQI 308
+D +SW ++T Y HGL +++ F +M+ +PD V +L+ S + G ++
Sbjct: 377 KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEEL 436
Query: 309 HGWVIR-RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER-DVVSWNSIIS 360
++ G++ + ++ + GRL A+ L + MP + +V W +++S
Sbjct: 437 FSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 18/244 (7%)
Query: 286 KPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN 345
+ + VSI + T D G Q+H ++++ G NL +N LI Y K A +F+
Sbjct: 6 RQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 346 LMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
MPER+VVSW++++S H + + +L+LF +M G+ P++ TF + L AC L +
Sbjct: 66 SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125
Query: 403 GVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV---EKAYSIITDGIGSEAAGPTQWGA 459
G++++ K + ++E +V++Y + G + EK + I D W A
Sbjct: 126 GLQIHGFCL-KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD------RSLISWNA 178
Query: 460 LLYSCYLH---GSVAIGEIAANKLFDL-EPDNEHNFALLMKIYENAGRLEDMERVRMMLV 515
++ + ++H GS A+ + ++ E +E L+K + G + +++ LV
Sbjct: 179 MI-AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 516 DRGL 519
G
Sbjct: 238 RSGF 241
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 235/470 (50%), Gaps = 20/470 (4%)
Query: 65 AIEQVLKDIEASIEKGIRIDPEIYASLLETC---YRSQAIRHGSQVHRLIPTVLLRKNVG 121
A E+ L + G+ + S+L+ C I G +H + + ++
Sbjct: 229 AAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIV 288
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDD-----AIALY 176
V + L+ +YA G +++A LF M ++ +N++ISG+ Q+ D A L+
Sbjct: 289 VRTALLDMYAKNGSLKEAIKLFSLMPSKNV--VTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
M G+EP TF VLK C+ LE G ++H + F +D +AL+++Y
Sbjct: 347 MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Query: 237 GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
G + F ++D SW SM+ +V + A D F Q+ +P+ ++S ++
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 297 TGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVV 353
+ + ++ G QI G+ I+ G++ S+ S I Y+K G + A +F + DV
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 354 SWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
+++++IS+ +H EAL +FE M+ G+KP++ F+ +L AC + GLV G++ + M
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
Query: 411 TEKYKIKPIMEHHGCMVNLYGRAGMVEKAYS-IITDGIGSEAAGPTQWGALLYSCYLHGS 469
Y+I P +H C+V+L GR G + A + I++ G P W ALL SC ++
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDH---PVTWRALLSSCRVYKD 643
Query: 470 VAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
IG+ A +L +LEP+ ++ LL IY ++G E VR ++ DRG+
Sbjct: 644 SVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGV 693
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 223/463 (48%), Gaps = 33/463 (7%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
K +D E Y L +T +S ++ G H + L + + + L+ +Y +
Sbjct: 41 KNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGF 100
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A LFD+M +R+ +F NSLISGY Q+G Y+ A+ L+ + E ++ D FT+ L C
Sbjct: 101 ARQLFDRMPERNIISF--NSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFC 158
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
L++GE +H V G +N L+DMY KCG + +A +F+R RD VSWN
Sbjct: 159 GERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV------SSMDLGVQIHGWV 312
S+++ YV G E ++ +M +G ++ ++L ++ G+ IH +
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYT 278
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK-------- 364
+ G+E+++ + +L+ Y+K+G L A LF+LMP ++VV++N++IS +
Sbjct: 279 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA 338
Query: 365 HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHG 424
EA LF M+ G++P TF +L AC+ + G +++AL+ K +
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC-KNNFQSDEFIGS 397
Query: 425 CMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ----WGALLYSCYLHGSVAIGEIAA-NK 479
++ LY G E DG+ A+ Q W +++ C++ +
Sbjct: 398 ALIELYALMGSTE-------DGMQCFASTSKQDIASWTSMI-DCHVQNEQLESAFDLFRQ 449
Query: 480 LFD--LEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
LF + P+ E+ +L+M + L E+++ + G+D
Sbjct: 450 LFSSHIRPE-EYTVSLMMSACADFAALSSGEQIQGYAIKSGID 491
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 216/450 (48%), Gaps = 30/450 (6%)
Query: 64 QAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVT 123
QA+E L+ EA++ ++D YA L C + G +H L+ L + V +
Sbjct: 131 QAMELFLEAREANL----KLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLI 186
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
+ L+ +Y+ G ++ A LFD+ +RD + WNSLISGY ++G ++ + L +M +G
Sbjct: 187 NVLIDMYSKCGKLDQAMSLFDRCDERDQVS--WNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 184 VEPDLFTFPRVLKVCA---GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
+ + VLK C G +E G +H + + G D + AL+DMY K G +
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHG-----LEVEAMDTFCQMVLEGCKPDFVSISTI 295
+A K+F+ M ++ V++N+M++ ++ EA F M G +P + S +
Sbjct: 305 EAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVV 364
Query: 296 LTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV 352
L S +++ G QIH + + + + I ++LI Y+ G + F ++D+
Sbjct: 365 LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDI 424
Query: 353 VSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL--Y 407
SW S+I H ++ + A LF Q+ + ++P++ T ++SACA ++ G ++ Y
Sbjct: 425 ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGY 484
Query: 408 ALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLH 467
A+ K I +++Y ++G + A + + + A + A++ S H
Sbjct: 485 AI---KSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA---TYSAMISSLAQH 538
Query: 468 GSV--AIGEIAANKLFDLEPDNEHNFALLM 495
GS A+ + K ++P+ + +L+
Sbjct: 539 GSANEALNIFESMKTHGIKPNQQAFLGVLI 568
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/445 (30%), Positives = 234/445 (52%), Gaps = 28/445 (6%)
Query: 93 ETCYRSQ------------AIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED-- 138
++C++S+ +I+H Q+H I L+ + + S+LVR+ +S +D
Sbjct: 6 DSCFKSRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRV-SSLSLAKDLA 64
Query: 139 -AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
A L + D++ WN L GY+ ++I +Y +M G++P+ TFP +LK
Sbjct: 65 FARTLL--LHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKA 122
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
CA L G ++ ++ GF D N L+ +Y C ARK+F+ M R+ VSW
Sbjct: 123 CASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSW 182
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV-SSMDLGVQIHGWVIRRG 316
NS++TA V +G + FC+M+ + PD ++ +L+ ++ LG +H V+ R
Sbjct: 183 NSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRE 242
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFE 373
+E N + +L+ Y+K G L+ AR +F M +++V +W+++I ++ EAL LF
Sbjct: 243 LELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 374 Q-MEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
+ M+E+ V+P+ +TF+ +L AC++ GLV+DG + + M + +KIKP+M H+G MV++ GR
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGR 362
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLH---GSVAIGEIAANKLFDLEPDNEH 489
AG + +AY I A W LL +C +H IGE +L +LEP
Sbjct: 363 AGRLNEAYDFIKKMPFEPDA--VVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSG 420
Query: 490 NFALLMKIYENAGRLEDMERVRMML 514
N ++ + A + VR ++
Sbjct: 421 NLVIVANRFAEARMWAEAAEVRRVM 445
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 226/423 (53%), Gaps = 11/423 (2%)
Query: 104 GSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGY 163
G Q+H L T ++ V ++++ Y+ + + LFD+M + D ++ N +IS Y
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY--NVVISSY 326
Query: 164 AQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDG 223
+Q Y+ ++ + +M G + F F +L + A L L++G ++H A+ A +
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 224 LGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE 283
N+LVDMY KC +A IF + +R +VSW ++++ YV GL + F +M
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 284 GCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTA 340
+ D + +T+L +S+ LG Q+H ++IR G N+ + L+ Y+K G + A
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 341 RWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYL 397
+F MP+R+ VSWN++ISAH + + A+ F +M E+G++PD ++ + +L+AC++
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566
Query: 398 GLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQW 457
G V G + M+ Y I P +H+ CM++L GR G +A ++ D + E W
Sbjct: 567 GFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM-DEMPFE-PDEIMW 624
Query: 458 GALLYSCYLHGSVAIGEIAANKLFDLEP-DNEHNFALLMKIYENAGRLEDMERVRMMLVD 516
++L +C +H + ++ E AA KLF +E + + + IY AG E + V+ + +
Sbjct: 625 SSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Query: 517 RGL 519
RG+
Sbjct: 685 RGI 687
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 204/414 (49%), Gaps = 16/414 (3%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKN--VGVTSKLVRLYASFGYMEDAHD 141
D + +LL C + QVH + N + V++ L++ Y ++ A
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 142 LFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGL 201
LF+++ ++D+ F N+LI+GY + GLY ++I L+ +M + G +P FTF VLK GL
Sbjct: 206 LFEEIPEKDSVTF--NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGL 263
Query: 202 GLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSML 261
+G+++H +V GF D N ++D Y K +++ R +F+ M D VS+N ++
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIRRGVE 318
++Y ++ F +M G F ++ +I +SS+ +G Q+H + +
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD 383
Query: 319 WNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQM 375
L + NSL+ Y+K + A +F +P+R VSW ++IS + + H L LF +M
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGM 435
+ ++ D+ TF ++L A A + G +L+A + ++ + G +V++Y + G
Sbjct: 444 RGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGS 502
Query: 436 VEKAYSIITDGIGSEAAGPTQWGALL--YSCYLHGSVAIGEIAANKLFDLEPDN 487
++ A + + A W AL+ ++ G AIG A L+PD+
Sbjct: 503 IKDAVQVFEEMPDRNAVS---WNALISAHADNGDGEAAIGAFAKMIESGLQPDS 553
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 33/345 (9%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
+A++L +++ G Q+H + V + LV +YA E+A +F +
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
QR + W +LISGY Q GL+ + L+ +M + D TF VLK A L +G
Sbjct: 414 QR--TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
+++H +R+G + + LVDMY KCG I A ++F M R++VSWN++++A+ +
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIA--- 324
G A+ F +M+ G +PD VSI +LT S H + +G E+ +++
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACS--------HCGFVEQGTEYFQAMSPIY 583
Query: 325 ---------NSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISAHCKHREALALFEQ 374
++ ++GR A L + MP E D + W+S+++A C+ + +L E+
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA-CRIHKNQSLAER 642
Query: 375 MEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
E +K L A AY+ + N +YA E K++ +
Sbjct: 643 AAEKLFSMEK-----LRDAAAYVSMSN----IYAAAGEWEKVRDV 678
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 172/375 (45%), Gaps = 21/375 (5%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I+ G D ++E R + +V+ +P KN T+ ++ + G +
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMP----HKNTVSTNTMISGHVKTGDV 95
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG--VEPDLFTFPRV 194
A DLFD M R + W L+ YA+ +D+A L+ QM PD TF +
Sbjct: 96 SSARDLFDAMPDR--TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL--NALVDMYPKCGHIVKARKIFNRMHRR 252
L C +VH AV+ GF + N L+ Y + + A +F + +
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 253 DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIH 309
DSV++N+++T Y GL E++ F +M G +P + S +L G+ LG Q+H
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLH 273
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHR 366
+ G + S+ N ++ YSKH R+ R LF+ MPE D VS+N +IS++ ++
Sbjct: 274 ALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYE 333
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY--ALMTEKYKIKPIMEHHG 424
+L F +M+ G F ++LS A L + G +L+ AL+ I+
Sbjct: 334 ASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA---TADSILHVGN 390
Query: 425 CMVNLYGRAGMVEKA 439
+V++Y + M E+A
Sbjct: 391 SLVDMYAKCEMFEEA 405
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
+R D +A++L+ ++ G Q+H I +NV S LV +YA G ++DA
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+F++M R+A + WN+LIS +A G + AI + +M+E G++PD + VL C+
Sbjct: 507 VQVFEEMPDRNAVS--WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 200 GLGLLEVGEEVHRH-AVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM-HRRDSVSW 257
G +E G E + + G ++D+ + G +A K+ + M D + W
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 258 NSMLTA 263
+S+L A
Sbjct: 625 SSVLNA 630
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 226/452 (50%), Gaps = 12/452 (2%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
++ + +D +A LL QVH + + L+ + + + ++ YA G +
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
DA +FD + WNS+I+G+++ L + A L+ QM VE D++T+ +L
Sbjct: 255 SDAKRVFDGLGG-SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLS 313
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPK--CGHIVKARKIFNRMHRRDS 254
C+G G+ +H ++ G NAL+ MY + G + A +F + +D
Sbjct: 314 ACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDL 373
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGW 311
+SWNS++T + GL +A+ F + K D + S +L S ++ LG QIH
Sbjct: 374 ISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHAL 433
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER-DVVSWNSIISAHCKH---RE 367
+ G N + +SLI+ YSK G +++AR F + + V+WN++I + +H +
Sbjct: 434 ATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQV 493
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
+L LF QM VK D +TF ++L+AC++ GL+ +G+ L LM YKI+P MEH+ V
Sbjct: 494 SLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAV 553
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDN 487
+L GRAG+V KA +I P L C G + + AN L ++EP++
Sbjct: 554 DLLGRAGLVNKAKELIES--MPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPED 611
Query: 488 EHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ L +Y + + E+ V+ M+ +RG+
Sbjct: 612 HFTYVSLSHMYSDLKKWEEKASVKKMMKERGV 643
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 161/289 (55%), Gaps = 18/289 (6%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQ 178
++ V+++++ Y FG++ A+ LFD+M +RD+ + WN++ISGY G +DA L+
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVS--WNTMISGYTSCGKLEDAWCLFTC 91
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
M G + D ++F R+LK A + ++GE+VH ++ G+ + ++LVDMY KC
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 239 IVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDT-FCQMVLEGCKP-------DFV 290
+ A + F + +SVSWN+++ +V +V + T F + L K F
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFV----QVRDIKTAFWLLGLMEMKAAVTMDAGTFA 207
Query: 291 SISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN-LMPE 349
+ T+L +L Q+H V++ G++ ++I N++I +Y+ G + A+ +F+ L
Sbjct: 208 PLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGS 267
Query: 350 RDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACA 395
+D++SWNS+I+ KH A LF QM+ V+ D T+ LLSAC+
Sbjct: 268 KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 194/399 (48%), Gaps = 15/399 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G +D ++ LL+ + G QVH L+ NV V S LV +YA +EDA
Sbjct: 96 GSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDA 155
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM-VEEGVEPDLFTFPRVLKVC 198
+ F ++S+ + + WN+LI+G+ Q+ A L M ++ V D TF +L +
Sbjct: 156 FEAFKEISEPN--SVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLL 213
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM-HRRDSVSW 257
+ ++VH ++ G ++ NA++ Y CG + A+++F+ + +D +SW
Sbjct: 214 DDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISW 273
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIR 314
NSM+ + H L+ A + F QM + D + + +L+ S + G +HG VI+
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK 333
Query: 315 RGVEWNLSIANSLIIAYSKH--GRLDTARWLFNLMPERDVVSWNSIISAHCKH---REAL 369
+G+E S N+LI Y + G ++ A LF + +D++SWNSII+ + +A+
Sbjct: 334 KGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAV 393
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
F + + +K D F +LL +C+ L + G +++AL T+ + +V +
Sbjct: 394 KFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV-M 452
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
Y + G++E A I S+ + W A++ HG
Sbjct: 453 YSKCGIIESARKCFQQ-ISSKHS-TVAWNAMILGYAQHG 489
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 135/261 (51%), Gaps = 13/261 (4%)
Query: 61 TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
+KH+ E + + D Y LL C + G +H ++ L +
Sbjct: 281 SKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVT 340
Query: 121 GVTSKLVRLYASF--GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQ 178
T+ L+ +Y F G MEDA LF+ + +D WNS+I+G+AQ GL +DA+ +
Sbjct: 341 SATNALISMYIQFPTGTMEDALSLFESLKSKDL--ISWNSIITGFAQKGLSEDAVKFFSY 398
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
+ ++ D + F +L+ C+ L L++G+++H A ++GF ++ +++L+ MY KCG
Sbjct: 399 LRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGI 458
Query: 239 IVKARKIFNRMHRRDS-VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
I ARK F ++ + S V+WN+M+ Y HGL ++D F QM + K D V+ + ILT
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILT 518
Query: 298 GVSSMDLGVQIHGWVIRRGVE 318
S H +I+ G+E
Sbjct: 519 ACS--------HTGLIQEGLE 531
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 19/251 (7%)
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
H +A++ G +D N ++D Y K G + A +F+ M +RDSVSWN+M++ Y G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 270 EVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANS 326
+A F M G D S S +L G++S+ DLG Q+HG VI+ G E N+ + +S
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 327 LIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQME-EAGVKP 382
L+ Y+K R++ A F + E + VSWN++I+ + R+ A L ME +A V
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 383 DKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH-----GCMVNLYGRAGMVE 437
D TF LL+ L++D + L K+ + H M++ Y G V
Sbjct: 202 DAGTFAPLLT------LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 438 KAYSIITDGIG 448
A + DG+G
Sbjct: 256 DAKRVF-DGLG 265
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 217/446 (48%), Gaps = 42/446 (9%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+G + + + S+L C A R G QVH I + N+ V S L+ +YA ME
Sbjct: 221 EGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMES 280
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A L + M D + WNS+I G + GL +A++++ +M E ++ D FT P +L C
Sbjct: 281 ARALLEGMEVDDVVS--WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-C 337
Query: 199 AGLGLLE--VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
L E + H V+ G+ L NALVDMY K G + A K+F M +D +S
Sbjct: 338 FALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVIS 397
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVI 313
W +++T H+G EA+ FC M + G PD + +++L+ + + L G Q+HG I
Sbjct: 398 WTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYI 457
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHREALALFE 373
+ G +LS+ NSL+ Y+K G L+ A +FN M RD+++W +I + K+
Sbjct: 458 KSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN-------- 509
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
GL+ D R + M Y I P EH+ CM++L+GR+
Sbjct: 510 ------------------------GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRS 545
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFAL 493
G K ++ A T W A+L + HG++ GE AA L +LEP+N +
Sbjct: 546 GDFVKVEQLLHQMEVEPDA--TVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQ 603
Query: 494 LMKIYENAGRLEDMERVRMMLVDRGL 519
L +Y AGR ++ VR ++ R +
Sbjct: 604 LSNMYSAAGRQDEAANVRRLMKSRNI 629
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 212/450 (47%), Gaps = 29/450 (6%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
GI+ + S+L C + G Q+H +V V + L+ +YA + +A
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEA 179
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
LF+ M + + + W S+++GY+Q G AI + + EG + + +TFP VL CA
Sbjct: 180 EYLFETM-EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACA 238
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
+ VG +VH V++GF + +AL+DMY KC + AR + M D VSWNS
Sbjct: 239 SVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNS 298
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV----SSMDLGVQIHGWVIRR 315
M+ V GL EA+ F +M K D +I +IL + M + H +++
Sbjct: 299 MIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKT 358
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALF 372
G + N+L+ Y+K G +D+A +F M E+DV+SW ++++ + + EAL LF
Sbjct: 359 GYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLF 418
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
M G+ PDKI S+LSA A L L+ G +++ K + + +V +Y +
Sbjct: 419 CNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYI-KSGFPSSLSVNNSLVTMYTK 477
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIA-ANKLFD-------LE 484
G +E A I E W +C + G G + A + FD +
Sbjct: 478 CGSLEDANVIFN---SMEIRDLITW-----TCLIVGYAKNGLLEDAQRYFDSMRTVYGIT 529
Query: 485 PDNEHNFALLMKIYENAGRLEDMERVRMML 514
P EH +A ++ ++ GR D +V +L
Sbjct: 530 PGPEH-YACMIDLF---GRSGDFVKVEQLL 555
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 186/363 (51%), Gaps = 36/363 (9%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
++ Y++ + DA LF S + WN+LISGY + G +A L+++M +G++
Sbjct: 65 MIVAYSNSRRLSDAEKLFR--SNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
P+ +T VL++C L LL GE++H H ++ GF D +N L+ MY +C I +A +
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 246 FNRMH-RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSS 301
F M +++V+W SMLT Y +G +A++ F + EG + + F S+ T VS+
Sbjct: 183 FETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSA 242
Query: 302 MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA 361
+GVQ+H +++ G + N+ + ++LI Y+K +++AR L M DVVSWNS+I
Sbjct: 243 CRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVG 302
Query: 362 HCKH---REALALFEQMEEAGVKPDKITFVSLL------------SACAYLGLVNDGVRL 406
+ EAL++F +M E +K D T S+L ++ A+ +V G
Sbjct: 303 CVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYAT 362
Query: 407 YALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYL 466
Y L+ + +V++Y + G+++ A + I + W AL+
Sbjct: 363 YKLV------------NNALVDMYAKRGIMDSALKVFEGMIEKDV---ISWTALVTGNTH 407
Query: 467 HGS 469
+GS
Sbjct: 408 NGS 410
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 135/260 (51%), Gaps = 13/260 (5%)
Query: 222 DGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMV 281
D N ++ Y + A K+F ++++SWN++++ Y G +VEA + F +M
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 282 LEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLD 338
+G KP+ ++ ++L +S+ L G QIHG I+ G + ++++ N L+ Y++ R+
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 339 TARWLFNLMP-ERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSAC 394
A +LF M E++ V+W S+++ + ++ +A+ F + G + ++ TF S+L+AC
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 395 AYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP 454
A + GV+++ + K K + ++++Y + +E A +++ G E
Sbjct: 238 ASVSACRVGVQVHCCIV-KSGFKTNIYVQSALIDMYAKCREMESARALLE---GMEVDDV 293
Query: 455 TQWGALLYSCYLHGSVAIGE 474
W +++ C G IGE
Sbjct: 294 VSWNSMIVGCVRQG--LIGE 311
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/465 (29%), Positives = 234/465 (50%), Gaps = 22/465 (4%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIY--ASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVT 123
+E V + + +E + P++ +S+L C + + ++ + V
Sbjct: 286 LEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR 345
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
+ L+ +YA G M A D+F+ M +D + WNS+ISGY Q G +A+ L+ M+
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVS--WNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+ D T+ ++ V L L+ G+ +H + +++G D NAL+DMY KCG + +
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 244 KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM- 302
KIF+ M D+V+WN++++A V G + QM PD + L +S+
Sbjct: 464 KIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLA 523
Query: 303 --DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIIS 360
LG +IH ++R G E L I N+LI YSK G L+ + +F M RDVV+W +I
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 361 AHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIK 417
A+ + E AL F ME++G+ PD + F++++ AC++ GLV++G+ + M YKI
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKID 643
Query: 418 PIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ-----WGALLYSCYLHGSVAI 472
P++EH+ C+V+L R+ + KA I A P + W ++L +C G +
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQ-------AMPIKPDASIWASVLRACRTSGDMET 696
Query: 473 GEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDR 517
E + ++ +L PD+ L Y + + + +R L D+
Sbjct: 697 AERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDK 741
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 205/390 (52%), Gaps = 16/390 (4%)
Query: 101 IRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLI 160
++ G +H + V V + LV +Y F DA +FD+M RD+ ++ N++I
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY--NTMI 280
Query: 161 SGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG 220
GY +L + ++++ ++ + +++ +PDL T VL+ C L L + + ++ + ++AGF
Sbjct: 281 CGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 221 NDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQM 280
+ N L+D+Y KCG ++ AR +FN M +D+VSWNS+++ Y+ G +EAM F M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 281 VLEGCKPDFVS---ISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRL 337
++ + D ++ + ++ T ++ + G +H I+ G+ +LS++N+LI Y+K G +
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEV 459
Query: 338 DTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSAC 394
+ +F+ M D V+WN++ISA + + L + QM ++ V PD TF+ L C
Sbjct: 460 GDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Query: 395 AYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP 454
A L G ++ + ++ + ++ ++ +Y + G +E + + +
Sbjct: 520 ASLAAKRLGKEIHCCLL-RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV--- 575
Query: 455 TQWGALLYSCYLHGSVAIGEIAANKLFDLE 484
W ++Y+ ++G GE A D+E
Sbjct: 576 VTWTGMIYAYGMYGE---GEKALETFADME 602
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 204/388 (52%), Gaps = 24/388 (6%)
Query: 106 QVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQ 165
++H L+ ++ L + + KL+ Y+ F + +F ++S + + WNS+I +++
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA-KNVYLWNSIIRAFSK 83
Query: 166 LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG 225
GL+ +A+ Y ++ E V PD +TFP V+K CAGL E+G+ V+ + GF +D
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 226 LNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
NALVDMY + G + +AR++F+ M RD VSWNS+++ Y HG EA++ + ++
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 286 KPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW 342
PD ++S++L ++ G +HG+ ++ GV + + N L+ Y K R AR
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 343 LFNLMPERDVVSWNSIISAHCKH---REALALF-EQMEEAGVKPDKITFVSLLSACAYLG 398
+F+ M RD VS+N++I + K E++ +F E +++ KPD +T S+L AC +L
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTVSSVLRACGHLR 321
Query: 399 LVNDGVRLYALMTEKYKIKPIMEH--HGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ 456
++ +Y M K ++E ++++Y + G + A + E
Sbjct: 322 DLSLAKYIYNYM---LKAGFVLESTVRNILIDVYAKCGDMITARDVFN---SMECKDTVS 375
Query: 457 WGALLYSCYLHGSVAIGEI-AANKLFDL 483
W ++ + G + G++ A KLF +
Sbjct: 376 WNSI-----ISGYIQSGDLMEAMKLFKM 398
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 235/467 (50%), Gaps = 42/467 (8%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
++ C + + + G +V+ I + N + S LV +Y ++ A LFD+ +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 151 ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
N++ S Y + GL +A+ ++ M++ GV PD + + C+ L + G+
Sbjct: 302 LDL--CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 211 HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG-- 268
H + +R GF + NAL+DMY KC A +IF+RM + V+WNS++ YV +G
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 269 -----------------------------LEVEAMDTFCQM-VLEGCKPDFVSISTILTG 298
L EA++ FC M EG D V++ +I +
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 299 ---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSW 355
+ ++DL I+ ++ + G++ ++ + +L+ +S+ G ++A +FN + RDV +W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 356 N---SIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE 412
++ A+ LF+ M E G+KPD + FV L+AC++ GLV G ++ M +
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 413 KYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAI 472
+ + P H+GCMV+L GRAG++E+A +I D W +LL +C + G+V +
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED--MPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 473 GEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
AA K+ L P+ ++ LL +Y +AGR DM +VR+ + ++GL
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGL 704
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 207/407 (50%), Gaps = 42/407 (10%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ GI D + L C +S+A +G Q+H LI + K++ V + LV YA G +
Sbjct: 126 MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL 185
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV-EEGVEPDLFTFPRVL 195
+ A +FD+MS+R+ W S+I GYA+ DA+ L+F+MV +E V P+ T V+
Sbjct: 186 DSARKVFDEMSERN--VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 243
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
CA L LE GE+V+ +G + L ++ALVDMY KC I A+++F+ +
Sbjct: 244 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWV 312
N+M + YV GL EA+ F M+ G +PD +S+ + ++ S + G HG+V
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Query: 313 IRRGVE-W-NLSIA-----------------------------NSLIIAYSKHGRLDTAR 341
+R G E W N+ A NS++ Y ++G +D A
Sbjct: 364 LRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 342 WLFNLMPERDVVSWNSIISAHCK---HREALALFEQME-EAGVKPDKITFVSLLSACAYL 397
F MPE+++VSWN+IIS + EA+ +F M+ + GV D +T +S+ SAC +L
Sbjct: 424 ETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL 483
Query: 398 GLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
G ++ +Y + EK I+ + +V+++ R G E A SI
Sbjct: 484 GALDLAKWIYYYI-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 168/318 (52%), Gaps = 14/318 (4%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED---AHDLFDQM 146
S L+ C + I HR + L +V +KLV G E A ++F+
Sbjct: 37 SSLKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN- 92
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEV 206
S+ + F +NSLI GYA GL ++AI L+ +M+ G+ PD +TFP L CA
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 207 GEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVH 266
G ++H V+ G+ D N+LV Y +CG + ARK+F+ M R+ VSW SM+ Y
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 267 HGLEVEAMDTFCQMVL-EGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLS 322
+A+D F +MV E P+ V++ +++ + ++ G +++ ++ G+E N
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAG 379
+ ++L+ Y K +D A+ LF+ ++ N++ S + + REAL +F M ++G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 380 VKPDKITFVSLLSACAYL 397
V+PD+I+ +S +S+C+ L
Sbjct: 333 VRPDRISMLSAISSCSQL 350
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 235/467 (50%), Gaps = 42/467 (8%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
++ C + + + G +V+ I + N + S LV +Y ++ A LFD+ +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 151 ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
N++ S Y + GL +A+ ++ M++ GV PD + + C+ L + G+
Sbjct: 302 LDL--CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSC 359
Query: 211 HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG-- 268
H + +R GF + NAL+DMY KC A +IF+RM + V+WNS++ YV +G
Sbjct: 360 HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 269 -----------------------------LEVEAMDTFCQM-VLEGCKPDFVSISTILTG 298
L EA++ FC M EG D V++ +I +
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 299 ---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSW 355
+ ++DL I+ ++ + G++ ++ + +L+ +S+ G ++A +FN + RDV +W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 356 N---SIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE 412
++ A+ LF+ M E G+KPD + FV L+AC++ GLV G ++ M +
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 413 KYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAI 472
+ + P H+GCMV+L GRAG++E+A +I D W +LL +C + G+V +
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED--MPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 473 GEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
AA K+ L P+ ++ LL +Y +AGR DM +VR+ + ++GL
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGL 704
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 207/407 (50%), Gaps = 42/407 (10%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ GI D + L C +S+A +G Q+H LI + K++ V + LV YA G +
Sbjct: 126 MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL 185
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV-EEGVEPDLFTFPRVL 195
+ A +FD+MS+R+ + W S+I GYA+ DA+ L+F+MV +E V P+ T V+
Sbjct: 186 DSARKVFDEMSERNVVS--WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 243
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
CA L LE GE+V+ +G + L ++ALVDMY KC I A+++F+ +
Sbjct: 244 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWV 312
N+M + YV GL EA+ F M+ G +PD +S+ + ++ S + G HG+V
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN--------------------------- 345
+R G E +I N+LI Y K R DTA +F+
Sbjct: 364 LRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 346 ----LMPERDVVSWNSIISAHCK---HREALALFEQME-EAGVKPDKITFVSLLSACAYL 397
MPE+++VSWN+IIS + EA+ +F M+ + GV D +T +S+ SAC +L
Sbjct: 424 ETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL 483
Query: 398 GLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
G ++ +Y + EK I+ + +V+++ R G E A SI
Sbjct: 484 GALDLAKWIYYYI-EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN 529
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 168/318 (52%), Gaps = 14/318 (4%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED---AHDLFDQM 146
S L+ C + I HR + L +V +KLV G E A ++F+
Sbjct: 37 SSLKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN- 92
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEV 206
S+ + F +NSLI GYA GL ++AI L+ +M+ G+ PD +TFP L CA
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 207 GEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVH 266
G ++H V+ G+ D N+LV Y +CG + ARK+F+ M R+ VSW SM+ Y
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 267 HGLEVEAMDTFCQMVL-EGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLS 322
+A+D F +MV E P+ V++ +++ + ++ G +++ ++ G+E N
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAG 379
+ ++L+ Y K +D A+ LF+ ++ N++ S + + REAL +F M ++G
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 380 VKPDKITFVSLLSACAYL 397
V+PD+I+ +S +S+C+ L
Sbjct: 333 VRPDRISMLSAISSCSQL 350
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/436 (31%), Positives = 231/436 (52%), Gaps = 22/436 (5%)
Query: 97 RSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPW 156
R+ A+R G VH + ++ V + ++ +YA + A +FD +++ W
Sbjct: 217 RAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNE--VTW 274
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEEG----VEPDLFTFPRVLKVCAGLGLLEVGEEVHR 212
+++I GY + + +A ++FQM+ V P +L CA G L G VH
Sbjct: 275 SAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHC 332
Query: 213 HAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVE 272
+AV+AGF D N ++ Y K G + A + F+ + +D +S+NS++T V + E
Sbjct: 333 YAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEE 392
Query: 273 AMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLII 329
+ F +M G +PD ++ +LT S ++ G HG+ + G N SI N+L+
Sbjct: 393 SFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMD 452
Query: 330 AYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKIT 386
Y+K G+LD A+ +F+ M +RD+VSWN+++ H +EAL+LF M+E GV PD++T
Sbjct: 453 MYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVT 512
Query: 387 FVSLLSACAYLGLVNDGVRLYALMTE-KYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
+++LSAC++ GLV++G +L+ M+ + + P ++H+ CM +L RAG +++AY D
Sbjct: 513 LLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAY----D 568
Query: 446 GIGSEAAGPT--QWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGR 503
+ P G LL +C+ + + +G + K+ L E + LL Y A R
Sbjct: 569 FVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTE-SLVLLSNTYSAAER 627
Query: 504 LEDMERVRMMLVDRGL 519
ED R+RM+ RGL
Sbjct: 628 WEDAARIRMIQKKRGL 643
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 214/437 (48%), Gaps = 21/437 (4%)
Query: 44 PKPKSTPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRH 103
P P+ P+ + E+ L + G+R Y +L+ C +AI
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 104 GSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGY 163
G +H + ++ V + LV YA G +E A +FD+M +RD A WN++ISG+
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVA--WNAMISGF 179
Query: 164 AQLGLYDDAIALYFQMVE-EGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGND 222
+ D I L+ M +G+ P+L T + G L G+ VH + R GF ND
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 223 GLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVL 282
+ ++D+Y K I+ AR++F+ +++ V+W++M+ YV + + EA + F QM++
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 283 EG----CKPDFVSISTILTGVSSM-DL--GVQIHGWVIRRGVEWNLSIANSLIIAYSKHG 335
P V+I IL G + DL G +H + ++ G +L++ N++I Y+K+G
Sbjct: 300 NDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYG 357
Query: 336 RLDTARWLFNLMPERDVVSWNSIISA---HCKHREALALFEQMEEAGVKPDKITFVSLLS 392
L A F+ + +DV+S+NS+I+ +C+ E+ LF +M +G++PD T + +L+
Sbjct: 358 SLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLT 417
Query: 393 ACAYLGLVNDGVRLYA-LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEA 451
AC++L + G + + Y + + + ++++Y + G ++ A +
Sbjct: 418 ACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDT---MHK 472
Query: 452 AGPTQWGALLYSCYLHG 468
W +L+ +HG
Sbjct: 473 RDIVSWNTMLFGFGIHG 489
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 16/337 (4%)
Query: 87 IYASLLETCYRSQAIRHGSQVHR-LIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQ 145
++ SLLETC RS+ + G +H+ L+ L + V L RLYAS +E A +FD+
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 146 MSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLE 205
+ + W+ +I YA + A+ LY++M+ GV P +T+P VLK CAGL ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 206 VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
G+ +H H + F D ALVD Y KCG + A K+F+ M +RD V+WN+M++ +
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 266 HHGLEVEAMDTFCQM-VLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNL 321
H + + F M ++G P+ +I + + ++ G +HG+ R G +L
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 322 SIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQM--- 375
+ ++ Y+K + AR +F+L +++ V+W+++I + ++ +EA +F QM
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 376 -EEAGVKPDKITFVSLLSACAYLGLVNDG--VRLYAL 409
A V P I + L CA G ++ G V YA+
Sbjct: 301 DNVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAV 335
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)
Query: 83 IDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
+ P +L C R + G VH ++ V + ++ YA +G + DA
Sbjct: 306 VTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQ 365
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
F ++ +D +NSLI+G +++ L+ +M G+ PD+ T VL C+ L
Sbjct: 366 FSEIGLKDV--ISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLA 423
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
L G H + V G+ + NAL+DMY KCG + A+++F+ MH+RD VSWN+ML
Sbjct: 424 ALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLF 483
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRR--GV 317
+ HGL EA+ F M G PD V++ IL+ S +D G Q+ + R V
Sbjct: 484 GFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNV 543
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISAHCKHREA 368
+ N + ++ G LD A N MP E D+ +++SA ++ A
Sbjct: 544 IPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNA 595
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 224/421 (53%), Gaps = 15/421 (3%)
Query: 106 QVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQ 165
Q H I L + V + L+ Y+S G + A LFD +D W ++I G+ +
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDV--VTWTAMIDGFVR 181
Query: 166 LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAG-FGNDGL 224
G +A+ + +M + GV + T VLK + + G VH + G D
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 225 GLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG 284
++LVDMY KC A+K+F+ M R+ V+W +++ YV + M F +M+
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 285 CKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTAR 341
P+ ++S++L+ V ++ G ++H ++I+ +E N + +LI Y K G L+ A
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 342 WLFNLMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
+F + E++V +W ++I +AH R+A LF M + V P+++TF+++LSACA+ G
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGG 421
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ-- 456
LV +G RL+ M ++ ++P +H+ CMV+L+GR G++E+A ++I PT
Sbjct: 422 LVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIE----RMPMEPTNVV 477
Query: 457 WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVD 516
WGAL SC LH +G+ AA+++ L+P + + LL +Y + +++ RVR + D
Sbjct: 478 WGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKD 537
Query: 517 R 517
+
Sbjct: 538 Q 538
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 142/304 (46%), Gaps = 24/304 (7%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRL-IPTVLLRKNVGVTSKLVRLYASFGYM 136
+ G+ + S+L+ + + +R G VH L + T ++ +V + S LV +Y
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCY 256
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
+DA +FD+M R+ W +LI+GY Q +D + ++ +M++ V P+ T VL
Sbjct: 257 DDAQKVFDEMPSRNV--VTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLS 314
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
CA +G L G VH + ++ + L+D+Y KCG + +A +F R+H ++ +
Sbjct: 315 ACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYT 374
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRG 316
W +M+ + HG +A D F M+ P+ V+ +L+ + HG ++ G
Sbjct: 375 WTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA--------HGGLVEEG 426
Query: 317 VEWNLSIAN------------SLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISAHC 363
LS+ ++ + + G L+ A+ L MP E V W ++ +
Sbjct: 427 RRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCL 486
Query: 364 KHRE 367
H++
Sbjct: 487 LHKD 490
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
E++LK A EK + +S+L C A+ G +VH + + N +
Sbjct: 294 FEEMLKSDVAPNEKTL-------SSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTT 346
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
L+ LY G +E+A +F+++ +++ + W ++I+G+A G DA L++ M+ V
Sbjct: 347 LIDLYVKCGCLEEAILVFERLHEKN--VYTWTAMINGFAAHGYARDAFDLFYTMLSSHVS 404
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG--LNALVDMYPKCGHIVKAR 243
P+ TF VL CA GL+E G + +++ F + +VD++ + G + +A+
Sbjct: 405 PNEVTFMAVLSACAHGGLVEEGRRLFL-SMKGRFNMEPKADHYACMVDLFGRKGLLEEAK 463
Query: 244 KIFNRMHRRDS-VSWNSMLTAYVHH 267
+ RM + V W ++ + + H
Sbjct: 464 ALIERMPMEPTNVVWGALFGSCLLH 488
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 236/440 (53%), Gaps = 17/440 (3%)
Query: 81 IRIDPE--IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
I I P S+L+ C A R G +H + + + ++ +YA G
Sbjct: 395 IHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSP 454
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A F+++ +DA AF N+L GY Q+G + A +Y M GV PD T +L+ C
Sbjct: 455 ALKAFERLPIKDAVAF--NALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM-HRRDSVSW 257
A G V+ ++ GF ++ +AL++M+ KC + A +F++ + +VSW
Sbjct: 513 AFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSW 572
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIR 314
N M+ Y+ HG EA+ TF QM +E +P+ FV+I +S++ +G+ +H +I+
Sbjct: 573 NIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQ 632
Query: 315 RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALAL 371
G + NSL+ Y+K G ++++ F + + +VSWN+++SA+ H A++L
Sbjct: 633 CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSL 692
Query: 372 FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYG 431
F M+E +KPD ++F+S+LSAC + GLV +G R++ M E++KI+ +EH+ CMV+L G
Sbjct: 693 FLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLG 752
Query: 432 RAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNF 491
+AG+ +A ++ + G WGALL S +H ++ + A +L LEP N ++
Sbjct: 753 KAGLFGEAVEMMRRMRVKTSVGV--WGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY 810
Query: 492 ALLMKIYENAGRLEDMERVR 511
+ ++ G + ++ R++
Sbjct: 811 SQDRRL----GEVNNVSRIK 826
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 207/403 (51%), Gaps = 20/403 (4%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQ 178
+V V + L+ +Y+ G +E A LF + RD W+++I+ Y Q G +D+AI+L+
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDV--VSWSAMIASYEQAGQHDEAISLFRD 391
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
M+ ++P+ T VL+ CAG+ +G+ +H +A++A ++ A++ MY KCG
Sbjct: 392 MMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGR 451
Query: 239 IVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTI 295
A K F R+ +D+V++N++ Y G +A D + M L G PD V +
Sbjct: 452 FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQT 511
Query: 296 LTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDVVS 354
S G ++G +I+ G + +A++LI ++K L A LF+ E+ VS
Sbjct: 512 CAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVS 571
Query: 355 WNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
WN +++ + H EA+A F QM+ +P+ +TFV+++ A A L + G+ +++ +
Sbjct: 572 WNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI 631
Query: 412 EK--YKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG- 468
+ P+ +V++Y + GM+E + + I ++ W +L + HG
Sbjct: 632 QCGFCSQTPVGNS---LVDMYAKCGMIESSEKCFIE-ISNKYI--VSWNTMLSAYAAHGL 685
Query: 469 -SVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERV 510
S A+ + + +L+PD+ +F ++ +AG +E+ +R+
Sbjct: 686 ASCAVSLFLSMQENELKPDSV-SFLSVLSACRHAGLVEEGKRI 727
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 206/416 (49%), Gaps = 25/416 (6%)
Query: 76 SIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGY 135
S EKGI D + L+ C S + G ++H LI + L +V + + LV +Y
Sbjct: 91 SEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARD 150
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
+ A +FD+M +D WN+++SG AQ G A+ L+ M V+ D + ++
Sbjct: 151 LVSARQVFDKMHVKD--VVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLI 208
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
+ L +V +H ++ GF + L+DMY C + A +F + R+D
Sbjct: 209 PAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDES 266
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWV 312
SW +M+ AY H+G E ++ F M + + V+ ++ L V + G+ IH +
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH---CKHREAL 369
+++G+ ++S+A SL+ YSK G L+ A LF + +RDVVSW+++I+++ +H EA+
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAI 386
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG--VRLYALMTEKYKIKPIMEHHGCMV 427
+LF M +KP+ +T S+L CA + G + YA+ K I+ +E ++
Sbjct: 387 SLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAI---KADIESELETATAVI 443
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDL 483
++Y + G A + + P + A+ ++ G IG+ ANK FD+
Sbjct: 444 SMYAKCGRFSPA-------LKAFERLPIK-DAVAFNALAQGYTQIGD--ANKAFDV 489
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 187/387 (48%), Gaps = 21/387 (5%)
Query: 85 PEIYASLLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
P Y +LL + R QVH LI + L N +L+ Y+ F + + +F
Sbjct: 2 PINYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPHN-----QLINAYSLFQRQDLSRVIF 56
Query: 144 DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE-GVEPDLFTFPRVLKVCAGLG 202
D S RD WNS+I GY + GL+ +A+ + M EE G++PD ++F LK CAG
Sbjct: 57 D--SVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
+ G +H G +D ALV+MY K +V AR++F++MH +D V+WN+M++
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEW 319
+G A+ F M D VS+ ++ VS + D+ +HG VI++G +
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG--F 232
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQME 376
+ ++ LI Y L A +F + +D SW ++++A+ + E L LF+ M
Sbjct: 233 IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
V+ +K+ S L A AY+G + G+ ++ ++ I + M ++Y + G +
Sbjct: 293 NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLM-SMYSKCGEL 351
Query: 437 EKAYSIITDGIGSEAAGPTQWGALLYS 463
E A + I E W A++ S
Sbjct: 352 EIAEQLF---INIEDRDVVSWSAMIAS 375
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 190/392 (48%), Gaps = 15/392 (3%)
Query: 105 SQVHRLIPTVLLRKNV--GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISG 162
S V R + ++++K +S L+ +Y + + A +F+++ ++D S+ W ++++
Sbjct: 217 SDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESS--WGTMMAA 274
Query: 163 YAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGND 222
YA G +++ + L+ M V + L+ A +G L G +H +AV+ G D
Sbjct: 275 YAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGD 334
Query: 223 GLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVL 282
+L+ MY KCG + A ++F + RD VSW++M+ +Y G EA+ F M+
Sbjct: 335 VSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR 394
Query: 283 EGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDT 339
KP+ V+++++L GV++ LG IH + I+ +E L A ++I Y+K GR
Sbjct: 395 IHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSP 454
Query: 340 ARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAY 396
A F +P +D V++N++ + + +A +++ M+ GV PD T V +L CA+
Sbjct: 455 ALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAF 514
Query: 397 LGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ 456
G +Y + + H ++N++ + + A ++ D G E +
Sbjct: 515 CSDYARGSCVYGQIIKHGFDSECHVAHA-LINMFTKCDALAAAI-VLFDKCGFEKS-TVS 571
Query: 457 WGALLYSCYLHGSV--AIGEIAANKLFDLEPD 486
W ++ LHG A+ K+ +P+
Sbjct: 572 WNIMMNGYLLHGQAEEAVATFRQMKVEKFQPN 603
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G+ D +L+TC GS V+ I V L+ ++ + A
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
LFD+ + S WN +++GY G ++A+A + QM E +P+ TF +++ A
Sbjct: 557 IVLFDKCG-FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAA 615
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
L L VG VH ++ GF + N+LVDMY KCG I + K F + + VSWN+
Sbjct: 616 ELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNT 675
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG 298
ML+AY HGL A+ F M KPD VS ++L+
Sbjct: 676 MLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSA 714
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 234/439 (53%), Gaps = 49/439 (11%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E ++++ A + + C R GSQ+H L+ + L ++ + + L+ +Y+ GYM
Sbjct: 268 EGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMG 327
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
+A +F M +D+ + WNSLI+G Q +A L+ +M
Sbjct: 328 EAKAVFGVMKNKDSVS--WNSLITGLVQRKQISEAYELFEKMP----------------- 368
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
G D + ++ + G I K ++F M +D+++W
Sbjct: 369 ----------------------GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM-DL--GVQIHGWVIR 314
+M++A+V +G EA+ F +M+ + P+ + S++L+ +S+ DL G+QIHG V++
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 315 RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALAL 371
+ +LS+ NSL+ Y K G + A +F+ + E ++VS+N++IS + + ++AL L
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKL 526
Query: 372 FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYG 431
F +E +G +P+ +TF++LLSAC ++G V+ G + + M Y I+P +H+ CMV+L G
Sbjct: 527 FSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLG 586
Query: 432 RAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNF 491
R+G+++ A ++I+ +G WG+LL + H V + E+AA KL +LEPD+ +
Sbjct: 587 RSGLLDDASNLISTMPCKPHSGV--WGSLLSASKTHLRVDLAELAAKKLIELEPDSATPY 644
Query: 492 ALLMKIYENAGRLEDMERV 510
+L ++Y G+ D +R+
Sbjct: 645 VVLSQLYSIIGKNRDCDRI 663
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 178/387 (45%), Gaps = 29/387 (7%)
Query: 40 TLSFPKPKSTPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQ 99
T +F + +T I Q +KH A L++ EA + + +++ +
Sbjct: 37 TRNFLETTTTSTAIFQCNSQISKH-ARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENG 95
Query: 100 AIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSL 159
+ QV +P + + + +++ G A++LF + +++A ++ ++
Sbjct: 96 KMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLG---KAYELFCDIPEKNAVSYA--TM 150
Query: 160 ISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF 219
I+G+ + G +D+A LY + P F V G L G+ AVR
Sbjct: 151 ITGFVRAGRFDEAEFLYAE------TPVKFRDSVASNVLLS-GYLRAGK--WNEAVRVFQ 201
Query: 220 G---NDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDT 276
G + + +++V Y K G IV AR +F+RM R+ ++W +M+ Y G +
Sbjct: 202 GMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGL 261
Query: 277 FCQMVLEG-CKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYS 332
F +M EG K + +++ + G QIHG V R +E++L + NSL+ YS
Sbjct: 262 FLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYS 321
Query: 333 KHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVS 389
K G + A+ +F +M +D VSWNS+I+ + + EA LFE+M D +++
Sbjct: 322 KLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTD 377
Query: 390 LLSACAYLGLVNDGVRLYALMTEKYKI 416
++ + G ++ V L+ +M EK I
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNI 404
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 117/241 (48%), Gaps = 12/241 (4%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
E+ L ++K + + ++S+L + G Q+H + + + ++ V + L
Sbjct: 420 EEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSL 479
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
V +Y G DA+ +F +S+ + ++ N++ISGY+ G A+ L+ + G EP
Sbjct: 480 VSMYCKCGNTNDAYKIFSCISEPNIVSY--NTMISGYSYNGFGKKALKLFSMLESSGKEP 537
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF----GNDGLGLNALVDMYPKCGHIVKA 242
+ TF +L C +G +++G + + ++++ + G D +VD+ + G + A
Sbjct: 538 NGVTFLALLSACVHVGYVDLGWKYFK-SMKSSYNIEPGPDHYA--CMVDLLGRSGLLDDA 594
Query: 243 RKIFNRMH-RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS 301
+ + M + S W S+L+A H L V+ + + ++E +PD + +L+ + S
Sbjct: 595 SNLISTMPCKPHSGVWGSLLSASKTH-LRVDLAELAAKKLIE-LEPDSATPYVVLSQLYS 652
Query: 302 M 302
+
Sbjct: 653 I 653
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/532 (28%), Positives = 251/532 (47%), Gaps = 84/532 (15%)
Query: 60 QTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKN 119
H E L+ ++G+ D I +L C H + + L++N
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKEN 192
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM 179
+ V ++L+ LY G M DA++LF +M R+ WN +I G++Q + A+ ++ M
Sbjct: 193 LHVVNELLTLYPKAGRMGDAYNLFVEMPVRNR--MSWNVMIKGFSQEYDCESAVKIFEWM 250
Query: 180 VEEGVEPDLFTFPRVLK-----------------------------------VCAGLGLL 204
E +PD T+ VL VCA L L
Sbjct: 251 QREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEAL 310
Query: 205 EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAY 264
+ E+VH + ++ GF NAL+ +Y K G + A +F ++ + SWNS++T++
Sbjct: 311 SIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSF 370
Query: 265 VHHGL---------EVEAMDTFCQM---------VLEGCK-------------------- 286
V G E+E M+ C + V++GC
Sbjct: 371 VDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKV 430
Query: 287 -PDFVSISTILT---GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW 342
+ V+I IL+ + +++LG +IHG VIR + N+ + N+L+ Y+K G L
Sbjct: 431 LANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSL 490
Query: 343 LFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGL 399
+F + ++D++SWNSII + H +AL++F++M +G PD I V++LSAC++ GL
Sbjct: 491 VFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGL 550
Query: 400 VNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGA 459
V G ++ M++++ ++P EH+ C+V+L GR G +++A I+ + GA
Sbjct: 551 VEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKN--MPMEPKVCVLGA 608
Query: 460 LLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVR 511
LL SC +H +V I E A++L LEP+ ++ LL IY GR E+ VR
Sbjct: 609 LLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVR 660
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 171/370 (46%), Gaps = 50/370 (13%)
Query: 88 YASLLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM 146
+ LL C +Q R QVH +++ + + ++ + + L+ +YA G + DA ++F+ +
Sbjct: 59 FDHLLGLCLTAQQCR---QVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETV 115
Query: 147 SQRDASAFP-WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLE 205
S S WNS++ GLY++A+ LY M + G+ D + P +L+ C LG
Sbjct: 116 SLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFG 175
Query: 206 VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
+ H ++ G + +N L+ +YPK G + A +F M R+ +SWN M+ +
Sbjct: 176 LCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFS 235
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILT-----------------------GVSSM 302
A+ F M E KPD V+ +++L+ VS
Sbjct: 236 QEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE 295
Query: 303 DLGV---------------QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
L V ++HG+VI+ G E L N+LI Y K G++ A LF +
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 348 PERDVVSWNSIISAHC---KHREALALFEQMEE----AGVKPDKITFVSLLSACAYLGLV 400
+ + SWNS+I++ K EAL+LF ++EE VK + +T+ S++ C G
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 401 NDGVRLYALM 410
+D + + M
Sbjct: 416 DDSLEYFRQM 425
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 235/470 (50%), Gaps = 65/470 (13%)
Query: 85 PEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFD 144
PEI+A LL + HGS + + + + + S + A+ +F
Sbjct: 21 PEIHAHLL------RHFLHGSNL--------------LLAHFISICGSLSNSDYANRVFS 60
Query: 145 QMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLL 204
+ + F N++I Y+ +G ++++ + M G+ D +T+ +LK C+ L L
Sbjct: 61 HIQNPNVLVF--NAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDL 118
Query: 205 EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV--------- 255
G+ VH +R GF G +V++Y G + A+K+F+ M R+ V
Sbjct: 119 RFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGF 178
Query: 256 ----------------------SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSIS 293
SWNSM+++ G + EA++ FC+M+ +G PD ++
Sbjct: 179 CDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVV 238
Query: 294 TIL---TGVSSMDLGVQIHGWVIRRGVEWN-LSIANSLIIAYSKHGRLDTARWLFNLMPE 349
T+L + +D G IH G+ + +++ N+L+ Y K G L+ A +F M
Sbjct: 239 TVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQR 298
Query: 350 RDVVSWNSIISAHC---KHREALALFEQM-EEAGVKPDKITFVSLLSACAYLGLVNDGVR 405
R+VVSWN++IS K + LF+ M EE V P++ TF+ +L+ C+Y G V G
Sbjct: 299 RNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEE 358
Query: 406 LYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD-GIGSEAAGPTQWGALLYSC 464
L+ LM E++K++ EH+G MV+L R+G + +A+ + + + + AA WG+LL +C
Sbjct: 359 LFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAA---MWGSLLSAC 415
Query: 465 YLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMML 514
HG V + E+AA +L +EP N N+ LL +Y GR +D+E+VR ++
Sbjct: 416 RSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLM 465
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 181/389 (46%), Gaps = 38/389 (9%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+GI D YA LL++C +R G VH + + + +V LY S G M D
Sbjct: 96 RGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGD 155
Query: 139 AHDLFDQMSQRDA-----------------------------SAFPWNSLISGYAQLGLY 169
A +FD+MS+R+ S WNS+IS ++ G
Sbjct: 156 AQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRD 215
Query: 170 DDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NA 228
+A+ L+ +M+++G +PD T VL + A LG+L+ G+ +H A +G D + + NA
Sbjct: 216 REALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNA 275
Query: 229 LVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG-CKP 287
LVD Y K G + A IF +M RR+ VSWN++++ +G +D F M+ EG P
Sbjct: 276 LVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAP 335
Query: 288 D---FVSISTILTGVSSMDLGVQIHGWVIRR-GVEWNLSIANSLIIAYSKHGRLDTA-RW 342
+ F+ + + ++ G ++ G ++ R +E +++ S+ GR+ A ++
Sbjct: 336 NEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKF 395
Query: 343 LFNLMPERDVVSWNSIISAHCKHREA-LALFEQMEEAGVKP-DKITFVSLLSACAYLGLV 400
L N+ + W S++SA H + LA ME ++P + +V L + A G
Sbjct: 396 LKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRW 455
Query: 401 NDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
D ++ LM + K + C V++
Sbjct: 456 QDVEKVRTLMKKNRLRKSTGQSTICDVSV 484
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 233/441 (52%), Gaps = 55/441 (12%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
Y+SL++ S A R G + I +V + + L+ Y++ G + +A +FD+M
Sbjct: 874 YSSLVKAS--SFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMP 931
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
+RD A W +++S Y ++ D A +L QM E+
Sbjct: 932 ERDDIA--WTTMVSAYRRVLDMDSANSLANQMSEK------------------------- 964
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
N+ N L++ Y G++ +A +FN+M +D +SW +M+ Y +
Sbjct: 965 -------------NEATS-NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQN 1010
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIA 324
EA+ F +M+ EG PD V++ST+++ + + ++G ++H + ++ G ++ I
Sbjct: 1011 KRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIG 1070
Query: 325 NSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVK 381
++L+ YSK G L+ A +F +P++++ WNSII +AH +EAL +F +ME VK
Sbjct: 1071 SALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVK 1130
Query: 382 PDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYS 441
P+ +TFVS+ +AC + GLV++G R+Y M + Y I +EH+G MV+L+ +AG++ +A
Sbjct: 1131 PNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALE 1190
Query: 442 IITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYE 499
+ IG+ P WGALL C +H ++ I EIA NKL LEP N + LL+ +Y
Sbjct: 1191 L----IGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYA 1246
Query: 500 NAGRLEDMERVRMMLVDRGLD 520
R D+ +R + + G++
Sbjct: 1247 EQNRWRDVAEIRGRMRELGIE 1267
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 208/452 (46%), Gaps = 57/452 (12%)
Query: 70 LKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRL 129
L+D AS+ + P +++ C + + S + +I T L ++ + ++ +
Sbjct: 762 LRDFSASLS----LAPPNLKKIIKQCSTPKLLE--SALAAMIKTSL-NQDCRLMNQFITA 814
Query: 130 YASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLF 189
SF ++ A QM ++ + F +N+L G+ ++ LY +M+ + V P +
Sbjct: 815 CTSFKRLDLAVSTMTQM--QEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSY 872
Query: 190 TFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM 249
T+ ++K + GE + H + GFG L+D Y G I +ARK+F+ M
Sbjct: 873 TYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEM 930
Query: 250 HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIH 309
RD ++W +M++AY + VL D S +++ +S
Sbjct: 931 PERDDIAWTTMVSAY--------------RRVL-----DMDSANSLANQMS--------- 962
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHR 366
E N + +N LI Y G L+ A LFN MP +D++SW ++I S + ++R
Sbjct: 963 --------EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYR 1014
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCM 426
EA+A+F +M E G+ PD++T +++SACA+LG++ G ++ + + + +
Sbjct: 1015 EAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVY-IGSAL 1073
Query: 427 VNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG--SVAIGEIAANKLFDLE 484
V++Y + G +E+A + W +++ HG A+ A ++ ++
Sbjct: 1074 VDMYSKCGSLERALLVF---FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVK 1130
Query: 485 PDNEHNFALLMKIYENAGRLEDMERVRMMLVD 516
P N F + +AG +++ R+ ++D
Sbjct: 1131 P-NAVTFVSVFTACTHAGLVDEGRRIYRSMID 1161
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 248/469 (52%), Gaps = 50/469 (10%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
S+L +C + I H +H I ++ V +L+R+ ++ ++ A+D+F +S
Sbjct: 34 SVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVS-- 88
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+ + + + ++I G+ G D ++LY +M+ V PD + VLK C L+V E
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCRE 144
Query: 210 VHRHAVRAGFGND-GLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG 268
+H ++ GFG+ +GL ++++Y K G +V A+K+F+ M RD V+ M+ Y G
Sbjct: 145 IHAQVLKLGFGSSRSVGLK-MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 269 LEVEAM---------DTFC----------------------QMVLEGCKPDFVSISTILT 297
EA+ DT C +M +E + + +L+
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 298 GVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
S +++LG +H +V + +E + + N+LI YS+ G ++ AR +F +M ++DV+S
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVIS 323
Query: 355 WNSIISA---HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
+N++IS H EA+ F M G +P+++T V+LL+AC++ GL++ G+ ++ M
Sbjct: 324 YNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMK 383
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVA 471
+ ++P +EH+GC+V+L GR G +E+AY I + I E G LL +C +HG++
Sbjct: 384 RVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFI-ENIPIE-PDHIMLGTLLSACKIHGNME 441
Query: 472 IGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
+GE A +LF+ E + + LL +Y ++G+ ++ +R + D G++
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 213/438 (48%), Gaps = 43/438 (9%)
Query: 116 LRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIAL 175
LR V T L++ + A LFD +++ F +N LI Y ++I L
Sbjct: 12 LRTGVDETKDLLQRLLLIPNLVYARKLFDH--HQNSCTFLYNKLIQAYYVHHQPHESIVL 69
Query: 176 YFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPK 235
Y + +G+ P TF + A +H R+GF +D L+ Y K
Sbjct: 70 YNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAK 129
Query: 236 CGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQM----------VLEG- 284
G + AR++F+ M +RD WN+M+T Y G AM+ F M V+ G
Sbjct: 130 LGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGF 189
Query: 285 ---------------------CKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWN 320
KP+ +++ ++L +++ ++G ++ G+ G N
Sbjct: 190 SQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDN 249
Query: 321 LSIANSLIIAYSKHGRLDTARWLFN-LMPERDVVSWNSII---SAHCKHREALALFEQME 376
+ + N+ I YSK G +D A+ LF L +R++ SWNS+I + H KH EAL LF QM
Sbjct: 250 IYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQML 309
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
G KPD +TFV LL AC + G+V G L+ M E +KI P +EH+GCM++L GR G +
Sbjct: 310 REGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKL 369
Query: 437 EKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMK 496
++AY +I A WG LL +C HG+V I EIA+ LF LEP N N ++
Sbjct: 370 QEAYDLIKTMPMKPDA--VVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSN 427
Query: 497 IYENAGRLEDMERVRMML 514
IY + + + R+R ++
Sbjct: 428 IYAANEKWDGVLRMRKLM 445
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 220/445 (49%), Gaps = 49/445 (11%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G++ +SLL+ ++ G +H I L +V V + L+ +Y GY+ A
Sbjct: 220 GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA 279
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+FD M ++ A WNSL+SG + L DA AL +M +EG++PD T+
Sbjct: 280 RMVFDMMDAKNIVA--WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW-------- 329
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSV 255
N+L Y G KA + +M + + V
Sbjct: 330 ---------------------------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWV 312
SW ++ + +G A+ F +M EG P+ ++ST+L + + L G ++HG+
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREAL 369
+R+ + + +A +L+ Y K G L +A +F + + + SWN ++ + + E +
Sbjct: 423 LRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
A F M EAG++PD ITF S+LS C GLV +G + + LM +Y I P +EH CMV+L
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEH 489
GR+G +++A+ I S T WGA L SC +H + + EIA +L LEP N
Sbjct: 543 LGRSGYLDEAWDFIQ--TMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSA 600
Query: 490 NFALLMKIYENAGRLEDMERVRMML 514
N+ +++ +Y N R ED+ER+R ++
Sbjct: 601 NYMMMINLYSNLNRWEDVERIRNLM 625
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 171/345 (49%), Gaps = 43/345 (12%)
Query: 110 LIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLY 169
LI L + V S + Y + A+ LFD+M +RD A WN ++ + G +
Sbjct: 13 LIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLA--WNEIVMVNLRSGNW 70
Query: 170 DDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNAL 229
+ A+ L+ +M G + T ++L+VC+ G ++H + +R G ++ N+L
Sbjct: 71 EKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSL 130
Query: 230 VDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDF 289
+ MY + G + +RK+FN M R+ SWNS+L++Y G +A+ +M + G KPD
Sbjct: 131 IVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDI 190
Query: 290 VSISTILTGVSS--------------------------------------MDLGVQIHGW 311
V+ +++L+G +S + LG IHG+
Sbjct: 191 VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGY 250
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA---HCKHREA 368
++R + +++ + +LI Y K G L AR +F++M +++V+WNS++S C ++A
Sbjct: 251 ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDA 310
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
AL +ME+ G+KPD IT+ SL S A LG + + M EK
Sbjct: 311 EALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK 355
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 200/458 (43%), Gaps = 79/458 (17%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
LL+ C + G Q+H + + L NV + + L+ +Y+ G +E + +F+ M R+
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 151 ASAF---------------------------------PWNSLISGYAQLGLYDDAIALYF 177
S++ WNSL+SGYA GL DAIA+
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCG 237
+M G++P + +L+ A G L++G+ +H + +R D L+DMY K G
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 238 HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
++ AR +F+ M ++ V+WNS+++ + L +A +M EG KPD ++
Sbjct: 275 YLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT------ 328
Query: 298 GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVV 353
W NSL Y+ G+ + A + M E+ +VV
Sbjct: 329 -------------W-------------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 354 SWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
SW +I S K+ R AL +F +M+E GV P+ T +LL L L++ G ++
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 411 TEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL--YSCYLHG 468
K I +V++YG++G ++ A I G + W +L Y+ + G
Sbjct: 423 LRKNLICDAYVATA-LVDMYGKSGDLQSAIEIFW---GIKNKSLASWNCMLMGYAMFGRG 478
Query: 469 SVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLED 506
I + +EPD F ++ + +N+G +++
Sbjct: 479 EEGIAAFSVMLEAGMEPD-AITFTSVLSVCKNSGLVQE 515
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 18/193 (9%)
Query: 304 LGVQIHGWVIRRGVE-WNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH 362
LG+ IHG +I+RG++ + + ++ + Y + L A LF+ MP+RD ++WN I+ +
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 363 CKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
+ +A+ LF +M+ +G K T V LL C+ +G +++ Y ++
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHG-----YVLRLG 119
Query: 420 MEHHGCMVN----LYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSV--AIG 473
+E + M N +Y R G +E + + + + W ++L S G V AIG
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLELSRKVFNS---MKDRNLSSWNSILSSYTKLGYVDDAIG 176
Query: 474 EIAANKLFDLEPD 486
+ ++ L+PD
Sbjct: 177 LLDEMEICGLKPD 189
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 196/328 (59%), Gaps = 19/328 (5%)
Query: 204 LEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTA 263
+ +GE +H +R+GFG+ N+L+ +Y CG + A K+F++M +D V+WNS++
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 264 YVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWN 320
+ +G EA+ + +M +G KPD +I ++L+ + ++ LG ++H ++I+ G+ N
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 321 LSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHREALALFEQMEE 377
L +N L+ Y++ GR++ A+ LF+ M +++ VSW S+I + + +EA+ LF+ ME
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 378 A-GVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
G+ P +ITFV +L AC++ G+V +G + M E+YKI+P +EH GCMV+L RAG V
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 437 EKAYSIITDGIGSEAAGPTQ-----WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNF 491
+KAY I + P Q W LL +C +HG + E A ++ LEP++ ++
Sbjct: 244 KKAYEYIK-------SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 296
Query: 492 ALLMKIYENAGRLEDMERVRMMLVDRGL 519
LL +Y + R D++++R ++ G+
Sbjct: 297 VLLSNMYASEQRWSDVQKIRKQMLRDGV 324
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 161/303 (53%), Gaps = 17/303 (5%)
Query: 101 IRHGSQVHRLIPTVLLRKNVG----VTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPW 156
+R G +H +V++R G V + L+ LYA+ G + A+ +FD+M ++D A W
Sbjct: 4 VRLGETIH----SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA--W 57
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVR 216
NS+I+G+A+ G ++A+ALY +M +G++PD FT +L CA +G L +G+ VH + ++
Sbjct: 58 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 117
Query: 217 AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDT 276
G + N L+D+Y +CG + +A+ +F+ M ++SVSW S++ +G EA++
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 177
Query: 277 FCQM-VLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIA----NSLIIAY 331
F M EG P ++ IL S + + + R E+ + ++
Sbjct: 178 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 237
Query: 332 SKHGRLDTARWLFNLMP-ERDVVSWNSIISAHCKHREA-LALFEQMEEAGVKPDKITFVS 389
++ G++ A MP + +VV W +++ A H ++ LA F +++ ++P+
Sbjct: 238 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 297
Query: 390 LLS 392
LLS
Sbjct: 298 LLS 300
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 7/173 (4%)
Query: 299 VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI 358
++ + LG IH VIR G + + NSL+ Y+ G + +A +F+ MPE+D+V+WNS+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 359 ISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYK 415
I+ K EALAL+ +M G+KPD T VSLLSACA +G + G R++ M K
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI-KVG 119
Query: 416 IKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
+ + +++LY R G VE+A ++ + + + W +L+ ++G
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS---VSWTSLIVGLAVNG 169
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
KGI+ D SLL C + A+ G +VH + V L +N+ ++ L+ LYA G +E+
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM-VEEGVEPDLFTFPRVLKV 197
A LFD+M D ++ W SLI G A G +AI L+ M EG+ P TF +L
Sbjct: 143 AKTLFDEMV--DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 200
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGL--GLNALVDMYPKCGHIVKARKIFNRMHRR-DS 254
C+ G+++ G E R +R + + +VD+ + G + KA + M + +
Sbjct: 201 CSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 259
Query: 255 VSWNSMLTAYVHHG 268
V W ++L A HG
Sbjct: 260 VIWRTLLGACTVHG 273
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 224/442 (50%), Gaps = 53/442 (11%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
+ G+++D I SLL+ G +H L+ + + S L+ +Y+ FG +
Sbjct: 110 KDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVG 169
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
+A +F + ++D F N++ISGYA D+A+ L M G++PD+ T+
Sbjct: 170 NARKVFSDLGEQDLVVF--NAMISGYANNSQADEALNLVKDMKLLGIKPDVITW------ 221
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM----HRRD 253
NAL+ + + K +I M ++ D
Sbjct: 222 -----------------------------NALISGFSHMRNEEKVSEILELMCLDGYKPD 252
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHG 310
VSW S+++ VH+ +A D F QM+ G P+ +I T+L T ++ M G +IHG
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG 312
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---RE 367
+ + G+E + + ++L+ Y K G + A LF P++ V++NS+I + H +
Sbjct: 313 YSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADK 372
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
A+ LF+QME G K D +TF ++L+AC++ GL + G L+ LM KY+I P +EH+ CMV
Sbjct: 373 AVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMV 432
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEP 485
+L GRAG + +AY +I + P WGALL +C HG++ + IAA L +LEP
Sbjct: 433 DLLGRAGKLVEAYEMIK----AMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEP 488
Query: 486 DNEHNFALLMKIYENAGRLEDM 507
+N N LL +Y NAG E +
Sbjct: 489 ENSGNGLLLTSLYANAGSWESV 510
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 172/359 (47%), Gaps = 42/359 (11%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
Y L+E R + G +H + T + + + +KLV Y G + DA +FD+M
Sbjct: 19 YVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMP 78
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
+RD S +I A+ G Y +++ + +M ++G++ D F P +LK L E G
Sbjct: 79 KRDISGCV--VMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFG 136
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
+ +H ++ + +D +++L+DMY K G + ARK+F+ + +D V +N+M++ Y ++
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANN 196
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSL 327
EA++ M L G KPD ++ + +++G S M R E I +
Sbjct: 197 SQADEALNLVKDMKLLGIKPDVITWNALISGFSHM------------RNEEKVSEILELM 244
Query: 328 IIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA---HCKHREALALFEQMEEAGVKPDK 384
+ K DVVSW SIIS + ++ +A F+QM G+ P+
Sbjct: 245 CLDGYK----------------PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNS 288
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHG----CMVNLYGRAGMVEKA 439
T ++LL AC L + G ++ Y + +E HG ++++YG+ G + +A
Sbjct: 289 ATIITLLPACTTLAYMKHGKEIHG-----YSVVTGLEDHGFVRSALLDMYGKCGFISEA 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
E+ + + G+ + +LL C ++HG ++H L + V S L
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
+ +Y G++ +A LF + ++ F NS+I YA GL D A+ L+ QM G +
Sbjct: 330 LDMYGKCGFISEAMILFRKTPKKTTVTF--NSMIFCYANHGLADKAVELFDQMEATGEKL 387
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEV-----HRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
D TF +L C+ GL ++G+ + +++ + + +VD+ + G +V+
Sbjct: 388 DHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYA----CMVDLLGRAGKLVE 443
Query: 242 ARKIFNRMHRR-DSVSWNSMLTAYVHHG 268
A ++ M D W ++L A +HG
Sbjct: 444 AYEMIKAMRMEPDLFVWGALLAACRNHG 471
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 216/388 (55%), Gaps = 10/388 (2%)
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
M A LF+ MS+ D F NS+ GY++ + +L+ +++E+G+ PD +TFP +L
Sbjct: 79 MSYARHLFEAMSEPDIVIF--NSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
K CA LE G ++H +++ G ++ L++MY +C + AR +F+R+ V
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWV 312
+N+M+T Y EA+ F +M + KP+ +++ ++L+ + S+DLG IH +
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHREA---L 369
+ + + +LI ++K G LD A +F M +D +W+++I A+ H +A +
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
+FE+M V+PD+ITF+ LL+AC++ G V +G + ++ M K+ I P ++H+G MV+L
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEH 489
RAG +E AY I S P W LL +C H ++ + E + ++F+L+ +
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPT--PMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGG 434
Query: 490 NFALLMKIYENAGRLEDMERVRMMLVDR 517
++ +L +Y + E ++ +R ++ DR
Sbjct: 435 DYVILSNLYARNKKWEYVDSLRKVMKDR 462
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 158/305 (51%), Gaps = 6/305 (1%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+E GI D + SLL+ C ++A+ G Q+H L + L NV V L+ +Y +
Sbjct: 121 LEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDV 180
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
+ A +FD++ + +N++I+GYA+ ++A++L+ +M + ++P+ T VL
Sbjct: 181 DSARCVFDRIVE--PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLS 238
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
CA LG L++G+ +H++A + F AL+DM+ KCG + A IF +M +D+ +
Sbjct: 239 SCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA 298
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVI 313
W++M+ AY +HG ++M F +M E +PD ++ +L S ++ G + ++
Sbjct: 299 WSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMV 358
Query: 314 RR-GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHREALALF 372
+ G+ ++ S++ S+ G L+ A + +P I+ A C L L
Sbjct: 359 SKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
Query: 373 EQMEE 377
E++ E
Sbjct: 419 EKVSE 423
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 240/466 (51%), Gaps = 21/466 (4%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLL-----RKNVGV 122
+ +K I+ G E+ ASLL C R + S+V R+ ++L +++V +
Sbjct: 131 EAMKLIKEMYFYGFIPKSELVASLLALCTR---MGSSSKVARMFHALVLVDERMQESVLL 187
Query: 123 TSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
++ LV +Y F A +FDQM ++ W ++ISG Y+ + L+ M E
Sbjct: 188 STALVDMYLKFDDHAAAFHVFDQMEVKNE--VSWTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 183 GVEPDLFTFPRVLKVCAGLGL-LEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
+ P+ T VL C L + +E+H + R G D A + MY +CG++
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSL 305
Query: 242 ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS 301
+R +F RD V W+SM++ Y G E M+ QM EG + + V++ I++ ++
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTN 365
Query: 302 ---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI 358
+ +H +++ G ++ + N+LI Y+K G L AR +F + E+D+VSW+S+
Sbjct: 366 STLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSM 425
Query: 359 ISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYK 415
I+A+ H EAL +F+ M + G + D + F+++LSAC + GLV + ++ KY
Sbjct: 426 INAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGKYH 484
Query: 416 IKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAI-GE 474
+ +EH+ C +NL GR G ++ A+ + + +A W +LL +C HG + + G+
Sbjct: 485 MPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSA--RIWSSLLSACETHGRLDVAGK 542
Query: 475 IAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
I AN+L EPDN N+ LL KI+ +G E VR ++ R L+
Sbjct: 543 IIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLN 588
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 204/439 (46%), Gaps = 25/439 (5%)
Query: 87 IYASLLETC-YRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQ 145
I S+++ C ++ + G+Q+H L + V++ L+ +YA F +FD+
Sbjct: 48 ILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDE 107
Query: 146 MSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLE 205
M RD ++ S+I+ Q GL +A+ L +M G P +L +C +G
Sbjct: 108 MLHRDTVSYC--SIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMG--- 162
Query: 206 VGEEVHR--HA---VRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSM 260
+V R HA V L ALVDMY K A +F++M ++ VSW +M
Sbjct: 163 SSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAM 222
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGV----QIHGWVIRRG 316
++ V + +D F M E +P+ V++ ++L ++ G +IHG+ R G
Sbjct: 223 ISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHG 282
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFE 373
+ + + + Y + G + +R LF RDVV W+S+IS + + E + L
Sbjct: 283 CHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLN 342
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
QM + G++ + +T ++++SAC L++ +++ + + + I+ + ++++Y +
Sbjct: 343 QMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNA-LIDMYAKC 401
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALL--YSCYLHGSVAIGEIAANKLFDLEPDNEHNF 491
G + A + + + W +++ Y + HGS A+ EI + ++ F
Sbjct: 402 GSLSAAREVFYELTEKDL---VSWSSMINAYGLHGHGSEAL-EIFKGMIKGGHEVDDMAF 457
Query: 492 ALLMKIYENAGRLEDMERV 510
++ +AG +E+ + +
Sbjct: 458 LAILSACNHAGLVEEAQTI 476
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 134/296 (45%), Gaps = 28/296 (9%)
Query: 160 ISGYAQLGLYDDAIALY-FQMVEEGVEPDLFTFPRVLKVCA-GLGLLEVGEEVHRHAVRA 217
+ G YD+A+ LY ++ G P V+K CA +G ++H ++A
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 218 GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTF 277
G D + N+L+ MY K RK+F+ M RD+VS+ S++ + GL EAM
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 278 CQMVLEGCKPDFVSISTILTGVSSMDLGVQI----HGWV-IRRGVEWNLSIANSLIIAYS 332
+M G P ++++L + M ++ H V + ++ ++ ++ +L+ Y
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 333 KHGRLDTARWLFNLMPERDVVSWNSIIS---AHCKHREALALFEQMEEAGVKPDKITFVS 389
K A +F+ M ++ VSW ++IS A+ + + LF M+ ++P+++T +S
Sbjct: 197 KFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 390 LLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGC---------MVNLYGRAGMV 436
+L AC L + V+ +I HGC + +Y R G V
Sbjct: 257 VLPACVELNYGSSLVK---------EIHGFSFRHGCHADERLTAAFMTMYCRCGNV 303
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 213/400 (53%), Gaps = 42/400 (10%)
Query: 160 ISGYAQLGLYDDAIALYFQMVEEGVEP-DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAG 218
+S YA G ++ A+ L+ QM P D F LK CA +G VH H+V++
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 219 FGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFC 278
F ++ AL+DMY KC + ARK+F+ + +R++V WN+M++ Y H G EA++ +
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 279 QM-----------VLEGC----------------------KPDFVSISTILTGVSSMD-- 303
M +++G KP+ +++ +++ S++
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 304 -LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH 362
L +IH + R +E + + + L+ AY + G + + +F+ M +RDVV+W+S+ISA+
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 363 CKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
H AL F++ME A V PD I F+++L AC++ GL ++ + + M Y ++
Sbjct: 259 ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRAS 318
Query: 420 MEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANK 479
+H+ C+V++ R G E+AY +I E WGALL +C +G + + EIAA +
Sbjct: 319 KDHYSCLVDVLSRVGRFEEAYKVIQ--AMPEKPTAKTWGALLGACRNYGEIELAEIAARE 376
Query: 480 LFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
L +EP+N N+ LL KIY + GR E+ ER+R+ + + G+
Sbjct: 377 LLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGV 416
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 92/214 (42%), Gaps = 13/214 (6%)
Query: 63 HQAIEQVLKDIEASIEKGIRIDPEIYA--SLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
++AIE K IE R P + +L+ C A R ++H L+ +
Sbjct: 164 YRAIEFYRKMIE------FRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHP 217
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
+ S LV Y G + +FD M RD A W+SLIS YA G + A+ + +M
Sbjct: 218 QLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA--WSSLISAYALHGDAESALKTFQEME 275
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLL-EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
V PD F VLK C+ GL E R G + LVD+ + G
Sbjct: 276 LAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRF 335
Query: 240 VKARKIFNRMHRRDSV-SWNSMLTAYVHHGLEVE 272
+A K+ M + + +W ++L A ++G E+E
Sbjct: 336 EEAYKVIQAMPEKPTAKTWGALLGACRNYG-EIE 368
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 138/463 (29%), Positives = 239/463 (51%), Gaps = 27/463 (5%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ KG D + +L+ C + I+ GS VH + N+ V++ L+ +Y G +
Sbjct: 99 LRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEV 158
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
+F+ + Q + A W SLISG+ + DAI + +M GV+ + +L
Sbjct: 159 NYGLRVFEDIPQWNVVA--WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLV 216
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFG---NDGLGLN-----ALVDMYPKCGHIVKARKIFNR 248
C + G+ H GF +G N +L+DMY KCG + AR +F+
Sbjct: 217 ACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDG 276
Query: 249 MHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSI--STILTGVSSMD 303
M R VSWNS++T Y +G EA+ F M+ G PD F+S+ ++++ G S
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQ-- 334
Query: 304 LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---S 360
LG IH +V + G + +I +L+ Y+K G ++A+ F + ++D ++W +I +
Sbjct: 335 LGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLA 394
Query: 361 AHCKHREALALFEQMEEAG-VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
+H EAL++F++M+E G PD IT++ +L AC+++GLV +G R +A M + + ++P
Sbjct: 395 SHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPT 454
Query: 420 MEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAA 477
+EH+GCMV++ RAG E+A ++ + P WGALL C +H ++ + +
Sbjct: 455 VEHYGCMVDILSRAGRFEEAERLVK----TMPVKPNVNIWGALLNGCDIHENLELTDRIR 510
Query: 478 NKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
+ + + E + LL IY AGR D++ +R + + +D
Sbjct: 511 SMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVD 553
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 227/474 (47%), Gaps = 60/474 (12%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFG---YMEDAHDLFDQM 146
S LE C +++ +Q+H L+ + +NV S+L+ + + A +F+ +
Sbjct: 11 SQLENC---RSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI 67
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEV 206
S + WNS+I GY+ D A+ Y +M+ +G PD FTFP VLK C+GL ++
Sbjct: 68 DC--PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125
Query: 207 GEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVH 266
G VH V+ GF + L+ MY CG + ++F + + + V+W S+++ +V+
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 267 HGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWV--------IRR 315
+ +A++ F +M G K + + +L + G HG++ +
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQS 245
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
V +N+ +A SLI Y+K G L TAR+LF+ MPER +VSWNSII+ + ++ EAL +F
Sbjct: 246 KVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMF 305
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
M + G+ PDK+TF+S++ A G G ++A +++ +K +VN+Y +
Sbjct: 306 LDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCA-LVNMYAK 364
Query: 433 AGMVEKAYSIITD-------------------GIGSEAAGPTQ--------------WGA 459
G E A D G G+EA Q +
Sbjct: 365 TGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLG 424
Query: 460 LLYSCYLHGSVAIGEIAANKLFD---LEPDNEHNFALLMKIYENAGRLEDMERV 510
+LY+C G V G+ ++ D LEP EH + ++ I AGR E+ ER+
Sbjct: 425 VLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEH-YGCMVDILSRAGRFEEAERL 477
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/435 (32%), Positives = 221/435 (50%), Gaps = 27/435 (6%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
++L +C S ++ G VH L+K +TS +RL M + DL
Sbjct: 502 AILTSCDSSDSLIFGKSVH-----CWLQKLGDLTSAFLRLET----MSETRDLT------ 546
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRVLKVCAGLGLLEVGE 208
WNS+ISG A G + +++ + M EG + DL T + LGL+ G
Sbjct: 547 -----SWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG 268
H A+++ D N L+ MY +C I A K+F + + SWN +++A +
Sbjct: 602 CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNK 661
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLI 328
E F + LE + FV + + T + S G+Q H +IRRG + N ++ +L+
Sbjct: 662 AGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALV 721
Query: 329 IAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQM-EEAGVKPDK 384
YS G L+T +F + +WNS+ISAH H +A+ LF+++ + ++P+K
Sbjct: 722 DMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNK 781
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
+F+SLLSAC++ G +++G+ Y M EK+ +KP+ EH +V++ GRAG + +AY IT
Sbjct: 782 SSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFIT 841
Query: 445 DGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRL 504
GIG E WGALL +C HG +G+ A LF++EPDN + L Y G
Sbjct: 842 -GIG-EPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGW 899
Query: 505 EDMERVRMMLVDRGL 519
E+ R+R M+ D L
Sbjct: 900 EEAVRLRKMVEDNAL 914
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 171/343 (49%), Gaps = 11/343 (3%)
Query: 106 QVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQ 165
VH L +++ +SKL+ Y G + + LFD++ ++D WNS+I+ Q
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDV--IVWNSMITALNQ 165
Query: 166 LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG 225
G Y A+ L+ +M+ +G E D T + L L +H A+ G D
Sbjct: 166 NGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 226 LNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
NAL+++Y K ++ A +F M RD VSWN+++T + +G +++ F M G
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 286 KPDFVSISTILTGVSSMD---LGVQIHGWVIRRGV--EWNLSIANSLIIAYSKHGRLDTA 340
+ D V+ S +++ SS++ LG +HG VI+ G E ++S+ NS+I YSK G + A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 341 RWLFNLMPERDVVSWNSII---SAHCKHREALALFEQMEEAG-VKPDKITFVSLLSACAY 396
+F + RDV+S N+I+ +A+ EA + QM+ ++PD T VS+ S C
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 397 LGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
L +G ++ +E ++++YG+ G+ +A
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 185/396 (46%), Gaps = 44/396 (11%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLI--PTVLLRKNVGVTSK 125
Q K + S G D ++ ++ C + + G +H L+ +V V +
Sbjct: 275 QYFKSMTGS---GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNS 331
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE-EGV 184
++ +Y+ G E A +F+++ RD N++++G+A G++++A + QM + +
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDV--ISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 185 EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG-LNALVDMYPKCGHIVKAR 243
+PD+ T + +C L G VH + VR + L +N+++DMY KCG +A
Sbjct: 390 QPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE 449
Query: 244 KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD 303
+F RD VSWNSM++A+ +G +A + F ++V E F S+ST+L ++S D
Sbjct: 450 LLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKF-SLSTVLAILTSCD 508
Query: 304 ------LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE-RDVVSWN 356
G +H W+ K G L +A M E RD+ SWN
Sbjct: 509 SSDSLIFGKSVHCWL-------------------QKLGDLTSAFLRLETMSETRDLTSWN 549
Query: 357 SIISAHCK---HREALALFEQMEEAG-VKPDKITFVSLLSACAYLGLVNDGVRLYALMTE 412
S+IS H E+L F+ M G ++ D IT + +SA LGLV G + L +
Sbjct: 550 SVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIK 609
Query: 413 KYKIKPIMEHHGCMVNLYGRAGMVE---KAYSIITD 445
+ + + ++ +YGR +E K + +I+D
Sbjct: 610 SLR-ELDTQLQNTLITMYGRCKDIESAVKVFGLISD 644
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 155/331 (46%), Gaps = 16/331 (4%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I KG D R S +H L L + + + L+ LYA +
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A +F M RD WN++++ G ++ + M G E D TF V+
Sbjct: 240 SSAECVFTHMEHRD--IVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDG---LGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
C+ + L +GE +H +++G+ + +G N+++ MY KCG A +F + RD
Sbjct: 298 ACSSIEELTLGESLHGLVIKSGYSPEAHVSVG-NSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQM-VLEGCKPDF---VSISTILTGVSSMDLGVQIH 309
+S N++L + +G+ EA QM ++ +PD VSI++I +S G +H
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 310 GWVIRRGVEWN-LSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH--- 365
G+ +R ++ L + NS+I Y K G A LF RD+VSWNS+ISA ++
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFT 476
Query: 366 REALALFEQM--EEAGVKPDKITFVSLLSAC 394
+A LF+++ E + K T +++L++C
Sbjct: 477 HKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 130/248 (52%), Gaps = 7/248 (2%)
Query: 205 EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAY 264
E VH A++ G D + L+ Y + G +V + +F+ + +D + WNSM+TA
Sbjct: 104 ETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITAL 163
Query: 265 VHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQ---IHGWVIRRGVEWNL 321
+G + A+ F +M+ +G + D ++ + +SS+ L + +H I G+ +
Sbjct: 164 NQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS 223
Query: 322 SIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIIS---AHCKHREALALFEQMEEA 378
S+ N+L+ Y+K L +A +F M RD+VSWN+I++ A+ R++L F+ M +
Sbjct: 224 SLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS 283
Query: 379 GVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK-YKIKPIMEHHGCMVNLYGRAGMVE 437
G + D +TF ++SAC+ + + G L+ L+ + Y + + ++++Y + G E
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 438 KAYSIITD 445
A ++ +
Sbjct: 344 AAETVFEE 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 93/196 (47%), Gaps = 9/196 (4%)
Query: 79 KGIRIDPE--IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ ++++P + LL + + +G Q H + + N V++ LV +Y+S G +
Sbjct: 671 RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGML 730
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRVL 195
E +F SA WNS+IS + G+ + A+ L+ ++ +EP+ +F +L
Sbjct: 731 ETGMKVFRNSGVNSISA--WNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLL 788
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNA--LVDMYPKCGHIVKARKIFNRMHR-R 252
C+ G ++ G ++ + FG + + +VDM + G + +A + + +
Sbjct: 789 SACSHSGFIDEGLSYYKQ-MEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQ 847
Query: 253 DSVSWNSMLTAYVHHG 268
+ W ++L+A +HG
Sbjct: 848 KAGVWGALLSACNYHG 863
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 249/488 (51%), Gaps = 49/488 (10%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ KGIR D Y S+++ C +G VH I R N+ V + L+ +Y FG +
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRV-- 194
+ A LFD+MS+RDA + WN++I+ Y +A L +M GVE + T+ +
Sbjct: 236 DVARRLFDRMSERDAVS--WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAG 293
Query: 195 ---------------------------------LKVCAGLGLLEVGEEVHRHAVRA-GFG 220
LK C+ +G L+ G+ H +R+ F
Sbjct: 294 GCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFS 353
Query: 221 NDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQ 279
+D + N+L+ MY +C + A +F ++ +WNS+++ + ++ E +
Sbjct: 354 HDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKE 413
Query: 280 MVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRR-GVEWNLSIANSLIIAYSKHG 335
M+L G P+ +++++IL V ++ G + H +++RR + L + NSL+ Y+K G
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 336 RLDTARWLFNLMPERDVVSWNSIISAH---CKHREALALFEQMEEAGVKPDKITFVSLLS 392
+ A+ +F+ M +RD V++ S+I + K ALA F+ M+ +G+KPD +T V++LS
Sbjct: 474 EIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 393 ACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAA 452
AC++ LV +G L+ M + I+ +EH+ CMV+LY RAG ++KA I I E +
Sbjct: 534 ACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF-HTIPYEPS 592
Query: 453 GPTQWGALLYSCYLHGSVAIGEIAANK-LFDLEPDNEHNFALLMKIYENAGRLEDMERVR 511
LL +C +HG+ IGE AA+K L + +P++ ++ LL +Y G + V+
Sbjct: 593 S-AMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVK 651
Query: 512 MMLVDRGL 519
+L D G+
Sbjct: 652 TLLSDLGV 659
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 181/422 (42%), Gaps = 59/422 (13%)
Query: 89 ASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQ 148
ASLL TC G Q+H + L + + KLV Y++F +++A + + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITE--NS 144
Query: 149 RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
PWN LI Y + + +++++Y +M+ +G+ D FT+P V+K CA L G
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG 268
VH + + NAL+ MY + G + AR++F+RM RD+VSWN+++ Y
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTG-------VSSMDLGVQIHGWVIRRG----- 316
EA +M L G + V+ +TI G + +++ V + +R G
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 317 -----------VEWNL-----------------SIANSLIIAYSKHGRLDTARWLFNLMP 348
++W ++ NSLI YS+ L A +F +
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 349 ERDVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVR 405
+ +WNSIIS + E L ++M +G P+ IT S+L A +G + G
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 406 LYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA--------------YSIITDGIGSEA 451
+ + + K + +V++Y ++G + A Y+ + DG G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 452 AG 453
G
Sbjct: 505 KG 506
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 188 LFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN 247
L++ +L C G G+++H H + +G D + + LV Y + +A+ I
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITE 142
Query: 248 RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD-FVSISTILTGVSSMDL-- 304
+ WN ++ +Y+ + E++ + +M+ +G + D F S I + +D
Sbjct: 143 NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAY 202
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC- 363
G +HG + NL + N+LI Y + G++D AR LF+ M ERD VSWN+II+ +
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 364 --KHREALALFEQMEEAGVKPDKITFVSLLSAC----AYLGLVN 401
K EA L ++M +GV+ +T+ ++ C Y+G +N
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 249/488 (51%), Gaps = 49/488 (10%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ KGIR D Y S+++ C +G VH I R N+ V + L+ +Y FG +
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKV 235
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRV-- 194
+ A LFD+MS+RDA + WN++I+ Y +A L +M GVE + T+ +
Sbjct: 236 DVARRLFDRMSERDAVS--WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAG 293
Query: 195 ---------------------------------LKVCAGLGLLEVGEEVHRHAVRA-GFG 220
LK C+ +G L+ G+ H +R+ F
Sbjct: 294 GCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFS 353
Query: 221 NDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQ 279
+D + N+L+ MY +C + A +F ++ +WNS+++ + ++ E +
Sbjct: 354 HDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKE 413
Query: 280 MVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRR-GVEWNLSIANSLIIAYSKHG 335
M+L G P+ +++++IL V ++ G + H +++RR + L + NSL+ Y+K G
Sbjct: 414 MLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG 473
Query: 336 RLDTARWLFNLMPERDVVSWNSIISAH---CKHREALALFEQMEEAGVKPDKITFVSLLS 392
+ A+ +F+ M +RD V++ S+I + K ALA F+ M+ +G+KPD +T V++LS
Sbjct: 474 EIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLS 533
Query: 393 ACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAA 452
AC++ LV +G L+ M + I+ +EH+ CMV+LY RAG ++KA I I E +
Sbjct: 534 ACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF-HTIPYEPS 592
Query: 453 GPTQWGALLYSCYLHGSVAIGEIAANK-LFDLEPDNEHNFALLMKIYENAGRLEDMERVR 511
LL +C +HG+ IGE AA+K L + +P++ ++ LL +Y G + V+
Sbjct: 593 S-AMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVK 651
Query: 512 MMLVDRGL 519
+L D G+
Sbjct: 652 TLLSDLGV 659
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 181/422 (42%), Gaps = 59/422 (13%)
Query: 89 ASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQ 148
ASLL TC G Q+H + L + + KLV Y++F +++A + + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITE--NS 144
Query: 149 RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
PWN LI Y + + +++++Y +M+ +G+ D FT+P V+K CA L G
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG 268
VH + + NAL+ MY + G + AR++F+RM RD+VSWN+++ Y
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTG-------VSSMDLGVQIHGWVIRRG----- 316
EA +M L G + V+ +TI G + +++ V + +R G
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 317 -----------VEWNL-----------------SIANSLIIAYSKHGRLDTARWLFNLMP 348
++W ++ NSLI YS+ L A +F +
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 349 ERDVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVR 405
+ +WNSIIS + E L ++M +G P+ IT S+L A +G + G
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 406 LYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA--------------YSIITDGIGSEA 451
+ + + K + +V++Y ++G + A Y+ + DG G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 452 AG 453
G
Sbjct: 505 KG 506
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 188 LFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN 247
L++ +L C G G+++H H + +G D + + LV Y + +A+ I
Sbjct: 83 LYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITE 142
Query: 248 RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD-FVSISTILTGVSSMDL-- 304
+ WN ++ +Y+ + E++ + +M+ +G + D F S I + +D
Sbjct: 143 NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAY 202
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC- 363
G +HG + NL + N+LI Y + G++D AR LF+ M ERD VSWN+II+ +
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 364 --KHREALALFEQMEEAGVKPDKITFVSLLSAC----AYLGLVN 401
K EA L ++M +GV+ +T+ ++ C Y+G +N
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 239/473 (50%), Gaps = 23/473 (4%)
Query: 57 PYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLL 116
Y Q+ Q E+ + + EK + I P +LL S + H +H L+ +
Sbjct: 226 AYSQSGLQ--EEAITVFKNMFEKNVEISPVTIINLL-----SAHVSH-EPLHCLVVKCGM 277
Query: 117 RKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALY 176
++ V + LV Y+ G + A L+ S + S S++S YA+ G D A+ +
Sbjct: 278 VNDISVVTSLVCAYSRCGCLVSAERLY--ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYF 335
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
+ + ++ D +L C +++G +H +A+++G L +N L+ MY K
Sbjct: 336 SKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKF 395
Query: 237 GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG-CKPDFVSISTI 295
+ +F ++ +SWNS+++ V G A + F QM+L G PD ++I+++
Sbjct: 396 DDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 455
Query: 296 LTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV 352
L G S ++LG ++HG+ +R E + +LI Y+K G A +F +
Sbjct: 456 LAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCT 515
Query: 353 VSWNSIISAHC----KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
+WNS+IS + +HR AL+ + +M E G+KPD+ITF+ +LSAC + G V++G +
Sbjct: 516 ATWNSMISGYSLSGLQHR-ALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFR 574
Query: 409 LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA-YSIITDGIGSEAAGPTQWGALLYSCYLH 467
M +++ I P ++H+ MV L GRA + +A Y I I ++A WGALL +C +H
Sbjct: 575 AMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSA---VWGALLSACIIH 631
Query: 468 GSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
+ +GE A K+F L+ N + L+ +Y +D+ RVR M+ D G D
Sbjct: 632 RELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYD 684
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 151/306 (49%), Gaps = 8/306 (2%)
Query: 106 QVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQ 165
QV + L + V V + L+ LY G + A LFD+M +RD WN+LI GY++
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVV--WNALICGYSR 128
Query: 166 LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG 225
G DA L+ M+++G P T +L C G + G VH A ++G D
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 226 LNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
NAL+ Y KC + A +F M + +VSWN+M+ AY GL+ EA+ F M +
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 286 KPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN 345
+ V+I +L+ S + +H V++ G+ ++S+ SL+ AYS+ G L +A L+
Sbjct: 249 EISPVTIINLLSAHVSHE---PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA 305
Query: 346 LMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
+ +V SI+S + + + A+ F + + +K D + V +L C ++
Sbjct: 306 SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDI 365
Query: 403 GVRLYA 408
G+ L+
Sbjct: 366 GMSLHG 371
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 12/254 (4%)
Query: 149 RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA---GLGLLE 205
RD S F +SL+ + I ++ ++ + P+ FT L+ L+
Sbjct: 11 RDLSYF--HSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQ 68
Query: 206 VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
V E+V H ++G +L+++Y K G + A+ +F+ M RD+V WN+++ Y
Sbjct: 69 V-EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLS 322
+G E +A F M+ +G P ++ +L G +HG + G+E +
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAG 379
+ N+LI YSK L +A LF M ++ VSWN++I A+ + EA+ +F+ M E
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 380 VKPDKITFVSLLSA 393
V+ +T ++LLSA
Sbjct: 248 VEISPVTIINLLSA 261
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/476 (31%), Positives = 244/476 (51%), Gaps = 57/476 (11%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED--AHDLFDQMS 147
S L+ C I+ Q+H + L ++ + +KL+R G D A + + +
Sbjct: 54 SKLDDCINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQ 110
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
R+ F W ++I GYA G +D+AIA+Y M +E + P FTF +LK C + L +G
Sbjct: 111 FRNP--FLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLG 168
Query: 208 EEVHRHAVR-AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVH 266
+ H R GF +G N ++DMY KC I ARK+F+ M RD +SW ++ AY
Sbjct: 169 RQFHAQTFRLRGFCFVYVG-NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 267 HG-LEV------------------------------EAMDTFCQMVLEGCKPDFVSISTI 295
G +E EA++ F +M G + D V+++
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGY 287
Query: 296 LTGVSSM------DLGVQIHGWVIRRGVEWN--LSIANSLIIAYSKHGRLDTARWLFNLM 347
++ + + D VQI + G + + I ++LI YSK G ++ A +F M
Sbjct: 288 ISACAQLGASKYADRAVQI---AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 348 PERDVVSWNSII---SAHCKHREALALFEQM-EEAGVKPDKITFVSLLSACAYLGLVNDG 403
++V +++S+I + H + +EAL LF M + +KP+ +TFV L AC++ GLV+ G
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 404 VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYS 463
+++ M + + ++P +H+ CMV+L GR G +++A +I + E G WGALL +
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKT-MSVEPHGGV-WGALLGA 462
Query: 464 CYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
C +H + I EIAA LF+LEPD N+ LL +Y +AG + RVR ++ ++GL
Sbjct: 463 CRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGL 518
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 244/450 (54%), Gaps = 11/450 (2%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I G + D S++ R + G ++H + N+ V + L+ +Y+
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
F +M +D W ++I+GYAQ + +A+ L+ + ++ +E D +L+
Sbjct: 438 CYMGRAFLRMHDKDL--ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
+ L + + +E+H H +R G D + N LVD+Y KC ++ A ++F + +D VS
Sbjct: 496 ASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVS 554
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVI 313
W SM+++ +G E EA++ F +MV G D V++ IL+ +S+ + G +IH +++
Sbjct: 555 WTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLL 614
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALA 370
R+G SIA +++ Y+ G L +A+ +F+ + + ++ + S+I+A+ H + A+
Sbjct: 615 RKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVE 674
Query: 371 LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLY 430
LF++M V PD I+F++LL AC++ GL+++G +M +Y+++P EH+ C+V++
Sbjct: 675 LFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 734
Query: 431 GRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHN 490
GRA V +A+ + + +E W ALL +C H IGEIAA +L +LEP N N
Sbjct: 735 GRANCVVEAFEFV-KMMKTEPTAEV-WCALLAACRSHSEKEIGEIAAQRLLELEPKNPGN 792
Query: 491 FALLMKIYENAGRLEDMERVRMMLVDRGLD 520
L+ ++ GR D+E+VR + G++
Sbjct: 793 LVLVSNVFAEQGRWNDVEKVRAKMKASGME 822
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 210/405 (51%), Gaps = 15/405 (3%)
Query: 44 PKPKSTPLLIHQQPY--PQTKHQAIEQVLKDIEASIEKGIRIDP-EIYASLLETCYRSQA 100
P + P QP P K + VL + ++ P E +A +LE C + +A
Sbjct: 36 PSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRA 95
Query: 101 IRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSL 159
+ G Q+H R+ T + + KLV +Y G ++DA +FD+M R +AF WN++
Sbjct: 96 VSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR--TAFAWNTM 153
Query: 160 ISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF 219
I Y G A+ALY+ M EGV L +FP +LK CA L + G E+H V+ G+
Sbjct: 154 IGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGY 213
Query: 220 GNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR-DSVSWNSMLTAYVHHGLEVEAMDTFC 278
+ G +NALV MY K + AR++F+ + D+V WNS+L++Y G +E ++ F
Sbjct: 214 HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFR 273
Query: 279 QMVLEGCKPDFVSISTILT---GVSSMDLGVQIHGWVIRRGVEWN-LSIANSLIIAYSKH 334
+M + G P+ +I + LT G S LG +IH V++ + L + N+LI Y++
Sbjct: 274 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 333
Query: 335 GRLDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLL 391
G++ A + M DVV+WNS+I + + ++EAL F M AG K D+++ S++
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393
Query: 392 SACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
+A L + G+ L+A + K+ ++ ++++Y + +
Sbjct: 394 AASGRLSNLLAGMELHAYVI-KHGWDSNLQVGNTLIDMYSKCNLT 437
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 208/466 (44%), Gaps = 46/466 (9%)
Query: 90 SLLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQ 148
S L C + G ++H ++ + + V + L+ +Y G M A + QM+
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN- 347
Query: 149 RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
+A WNSLI GY Q +Y +A+ + M+ G + D + ++ L L G
Sbjct: 348 -NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 406
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG 268
E+H + ++ G+ ++ N L+DMY KC + F RMH +D +SW +++ Y +
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIAN 325
VEA++ F + + + D + + +IL S SM + +IH ++R+G+ + I N
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQN 525
Query: 326 SLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQMEEAGVKP 382
L+ Y K + A +F + +DVVSW S+IS+ EA+ LF +M E G+
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA 585
Query: 383 DKITFVSLLSACAYLGLVNDG----------------------VRLYALMTEKYKIKPIM 420
D + + +LSA A L +N G V +YA + K +
Sbjct: 586 DSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVF 645
Query: 421 E--------HHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP--TQWGALLYSCYLHGSV 470
+ + M+N YG G + A + D + E P + ALLY+C G +
Sbjct: 646 DRIERKGLLQYTSMINAYGMHGCGKAAVELF-DKMRHENVSPDHISFLALLYACSHAGLL 704
Query: 471 AIGEIAANKL---FDLEPDNEHNFALLMKIYENAGRLEDMERVRMM 513
G + ++LEP EH L+ + +E E V+MM
Sbjct: 705 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 232/432 (53%), Gaps = 17/432 (3%)
Query: 87 IYASLLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQ 145
I ASL+ TC +RHG Q+H I + + R N+ V + ++ +Y G + A +F
Sbjct: 141 ILASLV-TC-----VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLT 194
Query: 146 MSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLE 205
M RD + WN LI + G + A+ ++ M E ++PD +T V+ +C+ L L
Sbjct: 195 MEDRDVVS--WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELS 252
Query: 206 VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
G++ ++ GF ++ + L A +DM+ KC + + K+F + + DSV NSM+ +Y
Sbjct: 253 KGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS 312
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS--MDLGVQIHGWVIRRGVEWNLSI 323
H +A+ F + + +PD + S++L+ +++ +D G +H VI+ G + + ++
Sbjct: 313 WHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAV 372
Query: 324 ANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHREALALFEQ-MEEAG 379
A SL+ Y K G +D A +F +D++ WN++I + + + E+LA+F Q +
Sbjct: 373 ATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQS 432
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
+KPD++T + +L AC Y G VN+G+++++ M + + + P EH+ C++ L R GM+ +A
Sbjct: 433 LKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEA 492
Query: 440 YSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYE 499
I D I E + W +L + G + E A + + EP + + +L+KIYE
Sbjct: 493 KD-IADKIPFEPSSHI-WEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYE 550
Query: 500 NAGRLEDMERVR 511
R E+ ++R
Sbjct: 551 MTWRWENSVKLR 562
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 178/364 (48%), Gaps = 20/364 (5%)
Query: 92 LETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDA 151
L+ ++S ++ + Q+ IP KN + ++ GY+ +A DLFD+M +RD
Sbjct: 46 LQLYFKSGSVINALQLFDDIPD----KNTITWNVCLKGLFKNGYLNNALDLFDEMPERDV 101
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVH 211
+ WN++ISG G ++ I ++F M + P FTF + + + + GE++H
Sbjct: 102 VS--WNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL---VTCVRHGEQIH 156
Query: 212 RHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
+A+ +G L + N+++DMY + G A +F M RD VSWN ++ + G +
Sbjct: 157 GNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNK 216
Query: 271 VEAMDTFCQMVLEGCKPDFVSIS---TILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSL 327
A+D F M +PD ++S +I + + + G Q I+ G N + +
Sbjct: 217 EVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAG 276
Query: 328 IIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDK 384
I +SK RLD + LF + + D V NS+I S HC +AL LF V+PDK
Sbjct: 277 IDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDK 336
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII- 443
TF S+LS+ + +++ G +++L+ K ++ +Y + G V+ A +
Sbjct: 337 FTFSSVLSSMNAV-MLDHGADVHSLVI-KLGFDLDTAVATSLMEMYFKTGSVDLAMGVFA 394
Query: 444 -TDG 446
TDG
Sbjct: 395 KTDG 398
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 35/235 (14%)
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
VH + AGF N + +Y K G ++ A ++F+ + +++++WN L +G
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 270 EVEAMDTFCQMV-------------LEGC------------------KPDFVSISTILTG 298
A+D F +M L C +P + S + +
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 299 VSSMDLGVQIHGWVIRRGV-EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNS 357
V+ + G QIHG I GV +NL + NS++ Y + G D A +F M +RDVVSWN
Sbjct: 146 VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNC 205
Query: 358 II---SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYAL 409
+I S AL F M E ++PD+ T ++S C+ L ++ G + AL
Sbjct: 206 LILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 249/504 (49%), Gaps = 86/504 (17%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED---AHDLFDQM 146
SLL +C +A+ +Q+H L + + T KL+ L+ + + A L
Sbjct: 10 SLLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCF 65
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRVLKVC------- 198
+ DA F +N+L+ GY++ +++A++ +M+ +G V PD F+F V+K
Sbjct: 66 PEPDA--FMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 199 ----------------------------AGLGLLE----VGEEVHR-------HAVRAGF 219
G G +E V +E+H+ + A F
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACF 183
Query: 220 -GNDGLGLNALVDM---------------YPKCGHIVKARKIFNRMHRRDSVSWNSMLTA 263
GND G + D Y K G + A++IF+ M RD VSW++M+
Sbjct: 184 RGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVG 243
Query: 264 YVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWN 320
H+G E+ F ++ G P+ VS++ +L+ S S + G +HG+V + G W
Sbjct: 244 IAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI 303
Query: 321 LSIANSLIIAYSKHGRLDTARWLFNLMPE-RDVVSWNSIISA---HCKHREALALFEQME 376
+S+ N+LI YS+ G + AR +F M E R +VSW S+I+ H + EA+ LF +M
Sbjct: 304 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
GV PD I+F+SLL AC++ GL+ +G ++ M Y I+P +EH+GCMV+LYGR+G +
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 437 EKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALL 494
+KAY D I PT W LL +C HG++ + E +L +L+P+N + LL
Sbjct: 424 QKAY----DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLL 479
Query: 495 MKIYENAGRLEDMERVRM-MLVDR 517
Y AG+ +D+ +R M+V R
Sbjct: 480 SNAYATAGKWKDVASIRKSMIVQR 503
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 220/424 (51%), Gaps = 15/424 (3%)
Query: 107 VHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQL 166
+H L + + + LV Y + A LFD+M + + W S+ISGY +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCE--PNVVSWTSVISGYNDM 108
Query: 167 GLYDDAIALYFQMVEEG-VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG 225
G +A++++ +M E+ V P+ +TF V K C+ L +G+ +H +G + +
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVV 168
Query: 226 LNALVDMYPKCGHIVKARKIFNRM--HRRDSVSWNSMLTAYVHHGLEVEAMDTF--CQMV 281
++LVDMY KC + AR++F+ M + R+ VSW SM+TAY + EA++ F
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 282 LEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLD 338
L + + ++++++ SS+ G HG V R G E N +A SL+ Y+K G L
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 339 TARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACA 395
A +F + V+S+ S+I A KH A+ LF++M + P+ +T + +L AC+
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 396 YLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII-TDGIGSEAAGP 454
+ GLVN+G+ +LM EKY + P H+ C+V++ GR G V++AY + T +G+E G
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAE-QGA 407
Query: 455 TQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMML 514
WGALL + LHG V I A+ +L + L Y +G ED E +R+ +
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEM 467
Query: 515 VDRG 518
G
Sbjct: 468 KRSG 471
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 25/291 (8%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
+AS+ + C R G +H + LR+N+ V+S LV +Y +E A +FD M
Sbjct: 134 FASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALY--FQMVEEGVEPDLFTFPRVLKVCAGLGLLE 205
+ W S+I+ YAQ +AI L+ F + F V+ C+ LG L+
Sbjct: 194 GYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQ 253
Query: 206 VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
G+ H R G+ ++ + +L+DMY KCG + A KIF R+ +S+ SM+ A
Sbjct: 254 WGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKA 313
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEW-NLSIA 324
HGL A+ F +MV P++V++ +L S H ++ G+E+ +L
Sbjct: 314 KHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS--------HSGLVNEGLEYLSLMAE 365
Query: 325 NSLIIAYSKH-----------GRLDTARWLFNLM---PERDVVSWNSIISA 361
++ S+H GR+D A L + E+ + W +++SA
Sbjct: 366 KYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSA 416
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 239/473 (50%), Gaps = 46/473 (9%)
Query: 88 YASLLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM 146
Y L++T + +R Q+H LI T L+ V + L AS M A+ +F ++
Sbjct: 27 YLRLIDT--QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRI 84
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV--EEGVEPDLFTFPRVLKVCAGLGLL 204
+ ++ F WN++I G+++ + AI+++ M+ V+P T+P V K LG
Sbjct: 85 NHKNP--FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQA 142
Query: 205 EVGEEVHRHAVRAGFGNDGLGLNALVDMY------------------------------- 233
G ++H ++ G +D N ++ MY
Sbjct: 143 RDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGF 202
Query: 234 PKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSIS 293
KCG I +A+ +F+ M +R+ VSWNSM++ +V +G +A+D F +M + KPD ++
Sbjct: 203 AKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMV 262
Query: 294 TILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER 350
++L + + + G IH +++R E N + +LI Y K G ++ +F P++
Sbjct: 263 SLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK 322
Query: 351 DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY 407
+ WNS+I + A+ LF ++E +G++PD ++F+ +L+ACA+ G V+ +
Sbjct: 323 QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF 382
Query: 408 ALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLH 467
LM EKY I+P ++H+ MVN+ G AG++E+A ++I + E W +LL +C
Sbjct: 383 RLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT--VIWSSLLSACRKI 440
Query: 468 GSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
G+V + + AA L L+PD + LL Y + G E+ R+++ +R ++
Sbjct: 441 GNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQME 493
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 31/312 (9%)
Query: 130 YASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLF 189
+A G ++ A +LFD+M QR+ + WNS+ISG+ + G + DA+ ++ +M E+ V+PD F
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVS--WNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 190 TFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM 249
T +L CA LG E G +H + VR F + + + AL+DMY KCG I + +F
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 250 HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIH 309
++ WNSM+ ++G E AMD F ++ G +PD VS +LT + H
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACA--------H 371
Query: 310 GWVIRRGVEWNLSIANSLIIAYS-KH-----------GRLDTARWLFNLMP-ERDVVSWN 356
+ R E+ + +I S KH G L+ A L MP E D V W+
Sbjct: 372 SGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWS 431
Query: 357 SIISAHCKHREALALFEQMEEAGVK--PDKIT-FVSLLSACAYLGLVNDGVRLYALMTEK 413
S++SA C+ + + ++ + K PD+ +V L +A A GL + V LM E+
Sbjct: 432 SLLSA-CRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKER 490
Query: 414 YKIKPIMEHHGC 425
K + GC
Sbjct: 491 QMEKEV----GC 498
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 228/436 (52%), Gaps = 13/436 (2%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
KG+ +D + + L++C R + G +H + + + L+ Y G + D
Sbjct: 119 KGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISD 178
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A +FD+M Q A +++L++GY Q+ A+ L+ M + V ++ T L
Sbjct: 179 ARKVFDEMPQ-SVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAI 237
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
+ LG L E H ++ G D + AL+ MY K G I AR+IF+ R+D V+WN
Sbjct: 238 SDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWN 297
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIRR 315
M+ Y GL E + QM E KP+ + +L+ + + +G + +
Sbjct: 298 CMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEE 357
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
+ + + +L+ Y+K G L+ A +FN M ++DV SW ++IS + H REA+ LF
Sbjct: 358 RIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLF 417
Query: 373 EQMEEAG--VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLY 430
+MEE V+P++ITF+ +L+AC++ GLV +G+R + M E Y P +EH+GC+V+L
Sbjct: 418 NKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLL 477
Query: 431 GRAGMVEKAYSIITD-GIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEH 489
GRAG +E+AY +I + I S++ T W ALL +C ++G+ +GE +L ++ +
Sbjct: 478 GRAGQLEEAYELIRNLPITSDS---TAWRALLAACRVYGNADLGESVMMRLAEMGETHPA 534
Query: 490 NFALLMKIYENAGRLE 505
+ LL + AG E
Sbjct: 535 DAILLAGTHAVAGNPE 550
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 187/349 (53%), Gaps = 19/349 (5%)
Query: 105 SQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYA 164
S++H + L K+ SKL+ ++S + A +F+ +S + + F +N++I GY+
Sbjct: 45 SRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVS--NTNLFMFNTMIRGYS 101
Query: 165 QLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGL 224
+ A +++ Q+ +G+ D F+F LK C+ + +GE +H A+R+GF
Sbjct: 102 ISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTD 161
Query: 225 GLNALVDMYPKCGHIVKARKIFNRMHRR-DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE 283
NAL+ Y CG I ARK+F+ M + D+V++++++ Y+ + A+D F M
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMR-- 219
Query: 284 GCKPD-FVSISTILTGVSSM-DLG-----VQIHGWVIRRGVEWNLSIANSLIIAYSKHGR 336
K + V++ST+L+ +S++ DLG H I+ G++ +L + +LI Y K G
Sbjct: 220 --KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGG 277
Query: 337 LDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSA 393
+ +AR +F+ +DVV+WN +I + K E + L QM+ +KP+ TFV LLS+
Sbjct: 278 ISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS 337
Query: 394 CAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
CAY G R A + E+ +I +V++Y + G++EKA I
Sbjct: 338 CAYSEAAFVG-RTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEI 385
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 214/391 (54%), Gaps = 12/391 (3%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQ 178
NV V S LV +Y FG +A + D++ ++D +LI GY+Q G +A+ +
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLIT--ALIVGYSQKGEDTEAVKAFQS 257
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
M+ E V+P+ +T+ VL C L + G+ +H V++GF + +L+ MY +C
Sbjct: 258 MLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSL 317
Query: 239 IVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG 298
+ + ++F + + VSW S+++ V +G E A+ F +M+ + KP+ ++S+ L G
Sbjct: 318 VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRG 377
Query: 299 VSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSW 355
S++ + G QIHG V + G + + + LI Y K G D AR +F+ + E DV+S
Sbjct: 378 CSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISL 437
Query: 356 NSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE 412
N++I ++ ++ REAL LFE+M G++P+ +T +S+L AC LV +G L+
Sbjct: 438 NTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSF-R 496
Query: 413 KYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAI 472
K KI +H+ CMV+L GRAG +E+A + T+ I + W LL +C +H V +
Sbjct: 497 KDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLV---LWRTLLSACKVHRKVEM 553
Query: 473 GEIAANKLFDLEPDNEHNFALLMKIYENAGR 503
E K+ ++EP +E L+ +Y + G+
Sbjct: 554 AERITRKILEIEPGDEGTLILMSNLYASTGK 584
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 164/324 (50%), Gaps = 12/324 (3%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
SKLV G ++ A +FD MS+R WNSLI+ + +A+ +Y M+
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSER--HIVTWNSLIAYLIKHRRSKEAVEMYRLMITNN 160
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF--GNDGLGLNALVDMYPKCGHIVK 241
V PD +T V K + L L + + H AV G N +G +ALVDMY K G +
Sbjct: 161 VLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVG-SALVDMYVKFGKTRE 219
Query: 242 ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS 301
A+ + +R+ +D V +++ Y G + EA+ F M++E +P+ + +++L +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 302 M-DL--GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI 358
+ D+ G IHG +++ G E L+ SL+ Y + +D + +F + + VSW S+
Sbjct: 280 LKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSL 339
Query: 359 ISAHCKH-REALAL--FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYK 415
IS ++ RE +AL F +M +KP+ T S L C+ L + +G +++ ++T KY
Sbjct: 340 ISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT-KYG 398
Query: 416 IKPIMEHHGCMVNLYGRAGMVEKA 439
+++LYG+ G + A
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMA 422
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 175/368 (47%), Gaps = 26/368 (7%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLV 127
+ +K ++ + + ++ + YAS+L +C + I +G +H L+ + + L+
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 128 RLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPD 187
+Y ++D+ +F + + W SLISG Q G + A+ + +M+ + ++P+
Sbjct: 310 TMYLRCSLVDDSLRVFKCIEY--PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Query: 188 LFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN 247
FT L+ C+ L + E G ++H + GF D + L+D+Y KCG AR +F+
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFD 427
Query: 248 RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQ 307
+ D +S N+M+ +Y +G EA+D F +M+ G +P+ V++ ++L ++ L
Sbjct: 428 TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRL--- 484
Query: 308 IHGWVIRRGVEWNLSIANSLIIAYSKH-----------GRLDTARWLFNLMPERDVVSWN 356
+ G E S I+ + H GRL+ A L + D+V W
Sbjct: 485 -----VEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWR 539
Query: 357 SIISAHCKHREALALFEQMEEA--GVKP-DKITFVSLLSACAYLGLVNDGVRLYALMTE- 412
+++SA CK + + E++ ++P D+ T + + + A G N + + + M +
Sbjct: 540 TLLSA-CKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598
Query: 413 KYKIKPIM 420
K K P M
Sbjct: 599 KLKKNPAM 606
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 156/339 (46%), Gaps = 13/339 (3%)
Query: 190 TFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM 249
F ++L+ C + + + H +++GF + G + LVD KCG I AR++F+ M
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISG-SKLVDASLKCGDIDYARQVFDGM 125
Query: 250 HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GV 306
R V+WNS++ + H EA++ + M+ PD ++S++ S + L
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 307 QIHGWVIRRGVE-WNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAH 362
+ HG + G+E N+ + ++L+ Y K G+ A+ + + + E+DVV ++I S
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 363 CKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEH 422
+ EA+ F+ M V+P++ T+ S+L +C L + +G ++ LM K + +
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMV-KSGFESALAS 304
Query: 423 HGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLF- 481
++ +Y R +V+ + + E W +L+ +G + I K+
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFK---CIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 482 DLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
D N + ++ N E+ ++ ++ G D
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFD 400
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 136/436 (31%), Positives = 242/436 (55%), Gaps = 15/436 (3%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
LL + R+++ G Q+H + L V + L+ Y+ D+ F+ Q+
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 151 ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
++ + +S+IS +AQ L ++ +M+ + PD P K CA L ++G V
Sbjct: 81 STTW--SSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSV 138
Query: 211 HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
H +++ G+ D ++LVDMY KCG IV ARK+F+ M +R+ V+W+ M+ Y G
Sbjct: 139 HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGEN 198
Query: 271 VEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSL 327
EA+ F + + E + F S+ ++ + ++LG QIHG I+ + + + +SL
Sbjct: 199 EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSL 258
Query: 328 IIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDK 384
+ YSK G + A +FN +P +++ WN+++ A+ +H ++ + LF++M+ +G+KP+
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
ITF+++L+AC++ GLV++G R Y ++ +I+P +H+ +V++ GRAG +++A +IT
Sbjct: 319 ITFLNVLNACSHAGLVDEG-RYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVIT 377
Query: 445 DGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAG 502
+ PT+ WGALL SC +H + + AA+K+F+L P + L Y G
Sbjct: 378 N----MPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADG 433
Query: 503 RLEDMERVRMMLVDRG 518
R ED + R +L DRG
Sbjct: 434 RFEDAAKARKLLRDRG 449
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 156/326 (47%), Gaps = 13/326 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
+R D + S ++C G VH L +V V S LV +YA G + A
Sbjct: 111 NLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYA 170
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+FD+M QR+ W+ ++ GYAQ+G ++A+ L+ + + E + + ++F V+ VCA
Sbjct: 171 RKMFDEMPQRNV--VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCA 228
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
LLE+G ++H ++++ F + ++LV +Y KCG A ++FN + ++ WN+
Sbjct: 229 NSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNA 288
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRG 316
ML AY H + ++ F +M L G KP+F++ +L S +D G +
Sbjct: 289 MLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR 348
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS-WNSIISAHCKHREALALFEQM 375
+E SL+ + GRL A + MP S W +++++ H+
Sbjct: 349 IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNT------- 401
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVN 401
E A DK+ + +S+ ++ L N
Sbjct: 402 ELAAFAADKVFELGPVSSGMHISLSN 427
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 237/480 (49%), Gaps = 49/480 (10%)
Query: 83 IDPEIY-ASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHD 141
+ P Y A L+ S A + G ++H I + ++ ++ KL+ L+ G + A
Sbjct: 31 LSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQ 90
Query: 142 LFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGL 201
+FD++ + SA+ N +ISGY + GL + + L +M G + D +T VLK
Sbjct: 91 VFDELPKPTLSAY--NYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSR 148
Query: 202 GLLEVGEE-----VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
G + VH ++ D + + ALVD Y K G + AR +F M + V
Sbjct: 149 GSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVC 208
Query: 257 WNSMLTAYVHHGLEVEA--------------------------------MDTFCQMVLEG 284
SM++ Y++ G +A +D + M G
Sbjct: 209 CTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAG 268
Query: 285 CKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTAR 341
P+ + ++++ S S ++G Q+H +++ GV ++ + +SL+ Y+K G ++ AR
Sbjct: 269 FHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDAR 328
Query: 342 WLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
+F+ M E++V SW S+I + K+ EAL LF +M+E ++P+ +TF+ LSAC++ G
Sbjct: 329 RVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSG 388
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWG 458
LV+ G ++ M Y +KP MEH+ C+V+L GRAG + KA+ E W
Sbjct: 389 LVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFAR--AMPERPDSDIWA 446
Query: 459 ALLYSCYLHGSVAIGEIAANKLFDLEPDNEHN-FALLMKIYENAGRLEDMERVRMMLVDR 517
ALL SC LHG+V + IAA++LF L D + L +Y + + +++ ++R ++ R
Sbjct: 447 ALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRR 506
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 147/293 (50%), Gaps = 16/293 (5%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
I+ + +D + +L++T +S + R + + +NV + ++ Y + G++
Sbjct: 167 IKCDVELDDVLITALVDTYVKSGKLESA----RTVFETMKDENVVCCTSMISGYMNQGFV 222
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLG-LYDDAIALYFQMVEEGVEPDLFTFPRVL 195
EDA ++F+ +D + N+++ G+++ G ++ +Y M G P++ TF V+
Sbjct: 223 EDAEEIFNTTKVKDIVVY--NAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVI 280
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
C+ L EVG++VH +++G ++L+DMY KCG I AR++F++M ++
Sbjct: 281 GACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVF 340
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRR 315
SW SM+ Y +G EA++ F +M +P++V+ L+ S G+ G+ I
Sbjct: 341 SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHS--GLVDKGYEIFE 398
Query: 316 GVEWNLSIANSL------IIAYSKHGRLDTARWLFNLMPER-DVVSWNSIISA 361
++ + S+ + + + G L+ A MPER D W +++S+
Sbjct: 399 SMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSS 451
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 211/411 (51%), Gaps = 47/411 (11%)
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGL--GLLEVGEE 209
+ W S I+ + G +A + M GVEP+ TF +L C G +G+
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 210 VHRHAVRAGF-------GNDGLGL-------------------------NALVDMYPKCG 237
+H +A + G G +G+ N ++D Y + G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 238 HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL- 296
+ A K+F++M RD +SW +M+ +V G + EA+ F +M + G KPD+V+I L
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 297 --TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
T + ++ G+ +H +V+ + + N+ ++NSLI Y + G ++ AR +F M +R VVS
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 355 WNSII---SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
WNS+I +A+ E+L F +M+E G KPD +TF L+AC+++GLV +G+R + +M
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHG- 468
Y+I P +EH+GC+V+LY RAG +E A ++ S P + G+LL +C HG
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQ----SMPMKPNEVVIGSLLAACSNHGN 390
Query: 469 SVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
++ + E L DL + N+ +L +Y G+ E ++R + GL
Sbjct: 391 NIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGL 441
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 139/272 (51%), Gaps = 7/272 (2%)
Query: 109 RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGL 168
RL+ + KN + ++ Y G +++A +FD+M +RD W ++I+G+ + G
Sbjct: 129 RLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDL--ISWTAMINGFVKKGY 186
Query: 169 YDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNA 228
++A+ + +M GV+PD L C LG L G VHR+ + F N+ N+
Sbjct: 187 QEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNS 246
Query: 229 LVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD 288
L+D+Y +CG + AR++F M +R VSWNS++ + +G E++ F +M +G KPD
Sbjct: 247 LIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPD 306
Query: 289 FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIA----NSLIIAYSKHGRLDTARWLF 344
V+ + LT S + L + + ++ +S L+ YS+ GRL+ A L
Sbjct: 307 AVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLV 366
Query: 345 NLMPER-DVVSWNSIISAHCKHREALALFEQM 375
MP + + V S+++A H + L E++
Sbjct: 367 QSMPMKPNEVVIGSLLAACSNHGNNIVLAERL 398
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G++ D + L C A+ G VHR + + + NV V++ L+ LY G +E A
Sbjct: 201 GVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFA 260
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+F M +R + WNS+I G+A G +++ + +M E+G +PD TF L C+
Sbjct: 261 RQVFYNMEKR--TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 200 GLGLLEVGE---EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR-DSV 255
+GL+E G ++ + R + G LVD+Y + G + A K+ M + + V
Sbjct: 319 HVGLVEEGLRYFQIMKCDYRISPRIEHYG--CLVDLYSRAGRLEDALKLVQSMPMKPNEV 376
Query: 256 SWNSMLTAYVHHG 268
S+L A +HG
Sbjct: 377 VIGSLLAACSNHG 389
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 224/424 (52%), Gaps = 43/424 (10%)
Query: 135 YMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG--VEPDLFTFP 192
Y++ A+ + D+ + + F NS+I + + + + + Y +++ G ++PD +T
Sbjct: 55 YLDYANQILDRSEK--PTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVN 112
Query: 193 RVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYP------------------ 234
+++ C GL + E G +VH +R GF ND L+ +Y
Sbjct: 113 FLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCP 172
Query: 235 -------------KCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMV 281
+CG +V ARK+F M RD ++WN+M++ Y G EA++ F M
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 282 LEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLD 338
LEG K + V++ ++L T + ++D G H ++ R ++ + +A +L+ Y+K G ++
Sbjct: 233 LEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDME 292
Query: 339 TARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACA 395
A +F M E++V +W+S ++ + + L LF M++ GV P+ +TFVS+L C+
Sbjct: 293 KAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCS 352
Query: 396 YLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPT 455
+G V++G R + M ++ I+P +EH+GC+V+LY RAG +E A SII A
Sbjct: 353 VVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAV- 411
Query: 456 QWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLV 515
W +LL++ ++ ++ +G +A+ K+ +LE N + LL IY ++ +++ VR +
Sbjct: 412 -WSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMK 470
Query: 516 DRGL 519
+G+
Sbjct: 471 SKGV 474
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 135/292 (46%), Gaps = 13/292 (4%)
Query: 76 SIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGY 135
+I +G DP + L+ + +V IP + + +V A G
Sbjct: 134 TIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPC----PDFVCRTAMVTACARCGD 189
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
+ A LF+ M +RD A WN++ISGYAQ+G +A+ ++ M EGV+ + VL
Sbjct: 190 VVFARKLFEGMPERDPIA--WNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
C LG L+ G H + R LVD+Y KCG + KA ++F M ++
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWV 312
+W+S L +G + ++ F M +G P+ V+ ++L G S +D G Q H
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDS 366
Query: 313 IRR--GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER-DVVSWNSIISA 361
+R G+E L L+ Y++ GRL+ A + MP + W+S++ A
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 231/458 (50%), Gaps = 15/458 (3%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLV 127
QV +D+ E R+D +L Q +R G Q+H L + V + +
Sbjct: 206 QVFRDLIN--ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI 263
Query: 128 RLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPD 187
LY+ G ++ LF + + D A+ N++I GY G + +++L+ +++ G
Sbjct: 264 SLYSKCGKIKMGSALFREFRKPDIVAY--NAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 188 LFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN 247
T ++ V L L+ +H + +++ F + AL +Y K I ARK+F+
Sbjct: 322 SSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD 378
Query: 248 RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDL 304
+ SWN+M++ Y +GL +A+ F +M P+ V+I+ IL+ + ++ L
Sbjct: 379 ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSL 438
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA--- 361
G +H V E ++ ++ +LI Y+K G + AR LF+LM +++ V+WN++IS
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 498
Query: 362 HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIME 421
H + +EAL +F +M +G+ P +TF+ +L AC++ GLV +G ++ M +Y +P ++
Sbjct: 499 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 422 HHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLF 481
H+ CMV++ GRAG +++A I + + E G + W LL +C +H + + KLF
Sbjct: 559 HYACMVDILGRAGHLQRALQFI-EAMSIEP-GSSVWETLLGACRIHKDTNLARTVSEKLF 616
Query: 482 DLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+L+PDN LL I+ VR R L
Sbjct: 617 ELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKL 654
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 213/439 (48%), Gaps = 52/439 (11%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
S +V++Y F +EDA +FD+M ++D WN++ISGY + +Y ++I ++ ++ E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDT--ILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 184 -VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKA 242
D T +L A L L +G ++H A + G + L + +Y KCG I
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 243 RKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM 302
+F + D V++N+M+ Y +G ++ F +++L G + ++ +++ +
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 303 DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH 362
L IHG+ ++ + S++ +L YSK +++AR LF+ PE+ + SWN++IS +
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 363 CKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGV--------------- 404
++ +A++LF +M+++ P+ +T +LSACA LG ++ G
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 405 --------------------RLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
RL+ LMT+K ++ M++ YG G ++A +I
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT-----WNTMISGYGLHGQGQEALNIFY 510
Query: 445 DGIGSE-AAGPTQWGALLYSCYLHGSVAIGEIAANKL---FDLEPDNEHNFALLMKIYEN 500
+ + S P + +LY+C G V G+ N + + EP +H +A ++ I
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH-YACMVDILGR 569
Query: 501 AGRLED-MERVRMMLVDRG 518
AG L+ ++ + M ++ G
Sbjct: 570 AGHLQRALQFIEAMSIEPG 588
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 193/414 (46%), Gaps = 38/414 (9%)
Query: 97 RSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPW 156
RS +I H +Q H I R ++ + +KL + + G + A D+F + + D F +
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV--FLF 86
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEE-GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
N L+ G++ +++++ + + ++P+ T+ + +G G +H AV
Sbjct: 87 NVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV 146
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMD 275
G ++ L + +V MY K + ARK+F+RM +D++ WN+M++ Y + + VE++
Sbjct: 147 VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQ 206
Query: 276 TFCQMVLEGC-KPDFVSISTILTGVSSMD---LGVQIHGWVIRRGVEWNLSIANSLIIAY 331
F ++ E C + D ++ IL V+ + LG+QIH + G + + I Y
Sbjct: 207 VFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLY 266
Query: 332 SKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFV 388
SK G++ LF + D+V++N++I + + E +L+LF+++ +G + T V
Sbjct: 267 SKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLV 326
Query: 389 SLLSACAYLGLV-------------------NDGVRLYALMTEKYKIKPIMEHH------ 423
SL+ +L L+ +Y+ + E + + +
Sbjct: 327 SLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLP 386
Query: 424 --GCMVNLYGRAGMVEKAYSIITDGIGSE-AAGPTQWGALLYSCYLHGSVAIGE 474
M++ Y + G+ E A S+ + SE + P +L +C G++++G+
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 239/465 (51%), Gaps = 47/465 (10%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
Y L+ C R++ + +H I + + + + + LV +Y G A +FD+M
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRVLKVCAGLGLLEV 206
RD A W S+++ Q L ++++ + + PD F F ++K CA LG ++
Sbjct: 66 HRDHIA--WASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 207 GEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAY-- 264
G +VH H + + + ND + ++LVDMY KCG + A+ +F+ + ++++SW +M++ Y
Sbjct: 124 GRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 265 -----------------------------VHHGLEVEAMDTFCQMVLEGCKP-DFVSIST 294
V G +EA F +M E D + +S+
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 295 ILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERD 351
I+ +++ G Q+HG VI G + + I+N+LI Y+K + A+ +F+ M RD
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 352 VVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
VVSW S+I +H +ALAL++ M GVKP+++TFV L+ AC+++G V G L+
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 409 LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
MT+ Y I+P ++H+ C+++L GR+G++++A ++I + PT W ALL +C G
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI-HTMPFPPDEPT-WAALLSACKRQG 421
Query: 469 SVAIG-EIAANKLFDLEPDNEHNFALLMKIYENA---GRLEDMER 509
+G IA + + + + + LL IY +A G++ + R
Sbjct: 422 RGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARR 466
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 65/371 (17%)
Query: 81 IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
+R D ++++L++ C +I HG QVH + V S LV +YA G + A
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 141 DLFDQMSQRDA-----------------------------SAFPWNSLISGYAQLGLYDD 171
+FD + ++ + + W +LISG+ Q G +
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 172 AIALYFQMVEEGVEP-DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALV 230
A +++ +M E V+ D ++ CA L G +VH + GF + NAL+
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 231 DMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD-- 288
DMY KC ++ A+ IF+RM RD VSW S++ HG +A+ + MV G KP+
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 289 -FVSISTILTGVSSMDLGVQIHGWVIRR-GVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
FV + + V ++ G ++ + + G+ +L L+ + G LD A L +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHT 400
Query: 347 MPERDVVSWNSIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
MP PD+ T+ +LLSAC G G+R+
Sbjct: 401 MP-------------------------------FPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 407 YALMTEKYKIK 417
+ +K+K
Sbjct: 430 ADHLVSSFKLK 440
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 234/444 (52%), Gaps = 17/444 (3%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRL-IPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
D S+L+ C + I G VH I +V V + L+ +Y+ ++ A +
Sbjct: 225 DCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRV 284
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
FD+ + R+ WNS+++G+ YD+A+ ++ MV+E VE D T +L+VC
Sbjct: 285 FDETTCRNI--VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
+ +H +R G+ ++ + L++L+D Y C + A + + M +D VS ++M++
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 402
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS-SMDLGVQ--IHGWVIRRGVEW 319
H G EA+ FC M P+ +++ ++L S S DL HG IRR +
Sbjct: 403 GLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI 459
Query: 320 N-LSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQM 375
N +S+ S++ AY+K G ++ AR F+ + E++++SW IISA+ + +ALALF++M
Sbjct: 460 NDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEM 519
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGM 435
++ G P+ +T+++ LSAC + GLV G+ ++ M E+ KP ++H+ C+V++ RAG
Sbjct: 520 KQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGE 578
Query: 436 VEKAYSIITDGIGSEAAGPTQWGALLYSC--YLHGSVAIGEIAANKLFDLEPDNEHNFAL 493
++ A +I + AG + WGA+L C + E+ A ++ +LEP + L
Sbjct: 579 IDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVA-EVLELEPLCSSGYLL 637
Query: 494 LMKIYENAGRLEDMERVRMMLVDR 517
+ ED+ +R ++ +R
Sbjct: 638 ASSTFAAEKSWEDVAMMRRLVKER 661
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 167/326 (51%), Gaps = 14/326 (4%)
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE 181
V + ++ +YA + A LFD+MS+RD W+ +I Y Q + L+ +MV
Sbjct: 162 VQNSILCMYADSDSLS-ARKLFDEMSERDV--ISWSVVIRSYVQSKEPVVGLKLFKEMVH 218
Query: 182 EG-VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG-NDGLGLNALVDMYPKCGHI 239
E EPD T VLK C + ++VG VH ++R GF D N+L+DMY K +
Sbjct: 219 EAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDV 278
Query: 240 VKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV 299
A ++F+ R+ VSWNS+L +VH+ EA++ F MV E + D V++ ++L
Sbjct: 279 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Query: 300 SSMDLGV---QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWN 356
+ + IHG +IRRG E N +SLI AY+ +D A + + M +DVVS +
Sbjct: 339 KFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCS 398
Query: 357 SIIS--AHC-KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
++IS AH + EA+++F M + P+ IT +SLL+AC+ + + + +
Sbjct: 399 TMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRR 455
Query: 414 YKIKPIMEHHGCMVNLYGRAGMVEKA 439
+ +V+ Y + G +E A
Sbjct: 456 SLAINDISVGTSIVDAYAKCGAIEMA 481
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 144/263 (54%), Gaps = 13/263 (4%)
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
FD M+ RD+ WN ++ G G ++ + + ++ G EP+ T V+ C L
Sbjct: 84 FDCMNSRDS--VSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLW 141
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
GE++H + +R+GF N+++ MY + ARK+F+ M RD +SW+ ++
Sbjct: 142 F--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIR 198
Query: 263 AYVHHGLEVEAMDTFCQMVLEG-CKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVE 318
+YV V + F +MV E +PD V+++++L + M D+G +HG+ IRRG +
Sbjct: 199 SYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFD 258
Query: 319 W-NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQ 374
++ + NSLI YSK +D+A +F+ R++VSWNSI++ ++ EAL +F
Sbjct: 259 LADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHL 318
Query: 375 MEEAGVKPDKITFVSLLSACAYL 397
M + V+ D++T VSLL C +
Sbjct: 319 MVQEAVEVDEVTVVSLLRVCKFF 341
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 152/302 (50%), Gaps = 31/302 (10%)
Query: 167 GLYDDAIALYFQMVEEGVE-PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG 225
G + + ++ Y ++ GV+ D F FP V K CA L L G
Sbjct: 23 GKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG------------------ 64
Query: 226 LNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
N++ D Y KCG + + F+ M+ RDSVSWN ++ + +G E E + F ++ + G
Sbjct: 65 -NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 286 KPDFVSISTILTGVSSMDL-GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLF 344
+P+ ++ ++ S+ G +IHG+VIR G S+ NS++ Y+ L +AR LF
Sbjct: 124 EPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLF 182
Query: 345 NLMPERDVVSWNSIISAHCKHRE---ALALFEQM-EEAGVKPDKITFVSLLSACAYLGLV 400
+ M ERDV+SW+ +I ++ + +E L LF++M EA +PD +T S+L AC + +
Sbjct: 183 DEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDI 242
Query: 401 NDGVRLYALMTEK-YKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGA 459
+ G ++ + + + + + ++++Y + V+ A+ + + + W +
Sbjct: 243 DVGRSVHGFSIRRGFDLADVFVCNS-LIDMYSKGFDVDSAFRVFDE---TTCRNIVSWNS 298
Query: 460 LL 461
+L
Sbjct: 299 IL 300
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 152/323 (47%), Gaps = 23/323 (7%)
Query: 52 LIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLI 111
+H Q Y ++ L+ +++ + +D SLL C + +H +I
Sbjct: 303 FVHNQRY--------DEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Query: 112 PTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDD 171
N S L+ Y S ++DA + D M+ +D + +++ISG A G D+
Sbjct: 355 IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSC--STMISGLAHAGRSDE 412
Query: 172 AIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NALV 230
AI+++ M + P+ T +L C+ L + H A+R + + + ++V
Sbjct: 413 AISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV 469
Query: 231 DMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFV 290
D Y KCG I AR+ F+++ ++ +SW +++AY +GL +A+ F +M +G P+ V
Sbjct: 470 DAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAV 529
Query: 291 SISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
+ L+ + L G+ I ++ + +L + ++ S+ G +DTA L +
Sbjct: 530 TYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Query: 348 PERDV----VSWNSIISAHCKHR 366
PE DV +W +I+S C++R
Sbjct: 590 PE-DVKAGASAWGAILSG-CRNR 610
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 211/404 (52%), Gaps = 55/404 (13%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
KNV + +++ Y G + A LFDQM RD WN++I GY + +DA AL+
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT--ISWNTMIDGYVHVSRMEDAFALFS 336
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCG 237
+M P+ D N +V Y G
Sbjct: 337 EM------PN---------------------------------RDAHSWNMMVSGYASVG 357
Query: 238 HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL- 296
++ AR F + + +VSWNS++ AY + EA+D F +M +EG KPD +++++L
Sbjct: 358 NVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS 417
Query: 297 --TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDVV 353
TG+ ++ LG+Q+H V++ + ++ + N+LI YS+ G + +R +F+ M +R+V+
Sbjct: 418 ASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVI 476
Query: 354 SWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
+WN++I + H EAL LF M+ G+ P ITFVS+L+ACA+ GLV++ + M
Sbjct: 477 TWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSM 536
Query: 411 TEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP--TQWGALLYSCYLHG 468
YKI+P MEH+ +VN+ G E+A IIT S P T WGALL +C ++
Sbjct: 537 MSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIIT----SMPFEPDKTVWGALLDACRIYN 592
Query: 469 SVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRM 512
+V + +AA + LEP++ + LL +Y + G ++ +VRM
Sbjct: 593 NVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRM 636
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 190/465 (40%), Gaps = 127/465 (27%)
Query: 102 RHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFG---YMEDAHDLFDQMSQRDA------- 151
R +Q +L V+ +++V + ++ Y S G ++E+A LFD+M RD+
Sbjct: 85 REMNQARKLFD-VMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMI 143
Query: 152 ----------------------SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLF 189
+A W+++I+G+ Q G D A+ L+ +M + P
Sbjct: 144 SGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCA 203
Query: 190 TFPRVLK---------VCAGLGLLEVGEEVHRHAVRA---GFGNDG-------------- 223
++K V G L G E +A G+G G
Sbjct: 204 LVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPD 263
Query: 224 ------------------LGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
+ N+++ Y K G +V AR +F++M RD++SWN+M+ YV
Sbjct: 264 LCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYV 323
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIAN 325
H +A F +M P+ R WN+
Sbjct: 324 HVSRMEDAFALFSEM------PN-------------------------RDAHSWNM---- 348
Query: 326 SLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKP 382
++ Y+ G ++ AR F PE+ VSWNSII+A+ K ++EA+ LF +M G KP
Sbjct: 349 -MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKP 407
Query: 383 DKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
D T SLLSA L + G++++ ++ + + P + H ++ +Y R G + ++ I
Sbjct: 408 DPHTLTSLLSASTGLVNLRLGMQMHQIVVK--TVIPDVPVHNALITMYSRCGEIMESRRI 465
Query: 443 ITD-GIGSEAAGPTQWGALLYSCYLHGSVA-----IGEIAANKLF 481
+ + E W A++ HG+ + G + +N ++
Sbjct: 466 FDEMKLKREV---ITWNAMIGGYAFHGNASEALNLFGSMKSNGIY 507
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 158/335 (47%), Gaps = 55/335 (16%)
Query: 134 GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
GY+ +A D+F+++ R+ WN++ISGY + + A L+ M + D+ T+
Sbjct: 54 GYIAEARDIFEKLEARN--TVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNT 107
Query: 194 VLK---VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH 250
++ C G+ LE ++ D N ++ Y K I +A +F +M
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMP----SRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 251 RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHG 310
R++VSW++M+T + +G A+ F +M ++ P + ++ G+ + +
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNER-LSEAA 218
Query: 311 WVIRR------GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE--------------- 349
WV+ + G E + N+LI+ Y + G+++ AR LF+ +P+
Sbjct: 219 WVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFC 278
Query: 350 RDVVSWNSIISAHCKHREALA---LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
++VVSWNS+I A+ K + ++ LF+QM++ D I++ +++ ++ + D L
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFAL 334
Query: 407 YALMTEKYKIKPIMEHH--GCMVNLYGRAGMVEKA 439
++ M P + H MV+ Y G VE A
Sbjct: 335 FSEM-------PNRDAHSWNMMVSGYASVGNVELA 362
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 59/320 (18%)
Query: 218 GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTF 277
GF LN ++ + G+I +AR IF ++ R++V+WN+M++ YV +A F
Sbjct: 39 GFRATNKELNQMI----RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLF 94
Query: 278 CQMVLEGCKPDFVSISTILTGVSSMDLGVQI--------HGWVIRRGVEWNLSIANSLII 329
M K D V+ +T+++G S G++ R WN ++I
Sbjct: 95 DVMP----KRDVVTWNTMISGYVSCG-GIRFLEEARKLFDEMPSRDSFSWN-----TMIS 144
Query: 330 AYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKIT 386
Y+K+ R+ A LF MPER+ VSW+++I+ C++ E A+ LF +M P
Sbjct: 145 GYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP---- 200
Query: 387 FVSLLSACAYL-GLV-NDGVRLYALMTEKYKI-----KPIMEHHGCMVNLYGRAGMVEKA 439
CA + GL+ N+ + A + +Y + ++ + ++ YG+ G VE A
Sbjct: 201 ------LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAA 254
Query: 440 ---YSIITDGIGSEAAGP---------TQWGALLYSCYLHGSVAIGEIAANKLFDLEPDN 487
+ I D G + G W +++ + G V ++A LFD D
Sbjct: 255 RCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDV----VSARLLFDQMKDR 310
Query: 488 EH-NFALLMKIYENAGRLED 506
+ ++ ++ Y + R+ED
Sbjct: 311 DTISWNTMIDGYVHVSRMED 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Query: 73 IEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS 132
I +IE G + DP SLL +R G Q+H+++ ++ +V V + L+ +Y+
Sbjct: 398 IRMNIE-GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSR 455
Query: 133 FGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFP 192
G + ++ +FD+M + WN++I GYA G +A+ L+ M G+ P TF
Sbjct: 456 CGEIMESRRIFDEMKLK-REVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFV 514
Query: 193 RVLKVCAGLGLLE 205
VL CA GL++
Sbjct: 515 SVLNACAHAGLVD 527
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 209/384 (54%), Gaps = 21/384 (5%)
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
E A FD+M +DA++ WN++I+GYA+ G + A L++ M+E+ + ++ ++
Sbjct: 140 FEKAQSFFDRMPFKDAAS--WNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMI 193
Query: 196 KVCAGLGLLEVGE-EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH-RRD 253
G +E G+ E H + + A++ Y K + A +F M ++
Sbjct: 194 S-----GYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKN 248
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHG 310
V+WN+M++ YV + + + F M+ EG +P+ +S+ L G +S++ LG QIH
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ 308
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---RE 367
V + + +++ SLI Y K G L A LF +M ++DVV+WN++IS + +H +
Sbjct: 309 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADK 368
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
AL LF +M + ++PD ITFV++L AC + GLVN G+ + M YK++P +H+ CMV
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMV 428
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDN 487
+L GRAG +E+A +I A +G LL +C +H +V + E AA KL L N
Sbjct: 429 DLLGRAGKLEEALKLIRSMPFRPHAAV--FGTLLGACRVHKNVELAEFAAEKLLQLNSQN 486
Query: 488 EHNFALLMKIYENAGRLEDMERVR 511
+ L IY + R ED+ RVR
Sbjct: 487 AAGYVQLANIYASKNRWEDVARVR 510
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 136/277 (49%), Gaps = 16/277 (5%)
Query: 134 GYM-----EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDL 188
GYM E A +F M+ + + WN++ISGY + +D + L+ M+EEG+ P+
Sbjct: 226 GYMKAKKVELAEAMFKDMTV-NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284
Query: 189 FTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNR 248
L C+ L L++G ++H+ ++ ND L +L+ MY KCG + A K+F
Sbjct: 285 SGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV 344
Query: 249 MHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLG 305
M ++D V+WN+M++ Y HG +A+ F +M+ +PD+++ +L + +++G
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
Query: 306 VQIHGWVIRR-GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
+ ++R VE ++ + G+L+ A L MP R + + C+
Sbjct: 405 MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACR 464
Query: 365 HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVN 401
+ + +E A +K+ ++ +A Y+ L N
Sbjct: 465 ------VHKNVELAEFAAEKLLQLNSQNAAGYVQLAN 495
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
E LK A +E+GIR + +S L C A++ G Q+H+++ L +V + L
Sbjct: 266 EDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSL 325
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
+ +Y G + DA LF+ M ++D A WN++ISGYAQ G D A+ L+ +M++ + P
Sbjct: 326 ISMYCKCGELGDAWKLFEVMKKKDVVA--WNAMISGYAQHGNADKALCLFREMIDNKIRP 383
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRA-GFGNDGLGLNALVDMYPKCGHIVKARKI 245
D TF VL C GL+ +G VR +VD+ + G + +A K+
Sbjct: 384 DWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKL 443
Query: 246 FNRM-HRRDSVSWNSMLTA-YVHHGLEV 271
M R + + ++L A VH +E+
Sbjct: 444 IRSMPFRPHAAVFGTLLGACRVHKNVEL 471
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 153/335 (45%), Gaps = 53/335 (15%)
Query: 222 DGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMV 281
D N ++ Y + + KA+ F+RM +D+ SWN+M+T Y G +A + F M+
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 282 LEGCKPDFVSISTILTG-VSSMDLGVQIHGWV---IRRGVEWNLSIANSLIIAYSKHGRL 337
+ + VS + +++G + DL H + +R V W ++I Y K ++
Sbjct: 183 ----EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAW-----TAMITGYMKAKKV 233
Query: 338 DTARWLFNLMP-ERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSA 393
+ A +F M +++V+WN++IS + ++ + L LF M E G++P+ S L
Sbjct: 234 ELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG 293
Query: 394 CAYLG----------------LVNDGVRLYALMT---------EKYKIKPIMEHH----- 423
C+ L L ND L +L++ + +K+ +M+
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAW 353
Query: 424 GCMVNLYGRAGMVEKAYSIITDGIGSEAAGP-TQWGALLYSCYLHGSVAIGEIAANKL-- 480
M++ Y + G +KA + + I ++ + A+L +C G V IG +
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Query: 481 -FDLEPDNEHNFALLMKIYENAGRLED-MERVRMM 513
+ +EP +H + ++ + AG+LE+ ++ +R M
Sbjct: 414 DYKVEPQPDH-YTCMVDLLGRAGKLEEALKLIRSM 447
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 237/470 (50%), Gaps = 47/470 (10%)
Query: 90 SLLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFG--YMEDAHDLFDQM 146
S L+ C + + ++ Q+H R++ T L++ + +T L +S ++ A +FD
Sbjct: 19 SCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEV 206
+ D F WN +I G++ + ++ LY +M+ + +TFP +LK C+ L E
Sbjct: 76 DRPDT--FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEE 133
Query: 207 GEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS------- 259
++H + G+ ND +N+L++ Y G+ A +F+R+ D VSWNS
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 193
Query: 260 ------------------------MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTI 295
M++ YV + EA+ F +M +PD VS++
Sbjct: 194 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 253
Query: 296 LTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV 352
L+ + +++ G IH ++ + + + + LI Y+K G ++ A +F + ++ V
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 353 VSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYAL 409
+W ++IS + H REA++ F +M++ G+KP+ ITF ++L+AC+Y GLV +G ++
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYS 373
Query: 410 MTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGS 469
M Y +KP +EH+GC+V+L GRAG++++A I + A WGALL +C +H +
Sbjct: 374 MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNA--VIWGALLKACRIHKN 431
Query: 470 VAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ +GE L ++P + + I+ + + R ++ ++G+
Sbjct: 432 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGV 481
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 153/332 (46%), Gaps = 39/332 (11%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
+ SLL+ C A +Q+H I + +V + L+ YA G + AH LFD++
Sbjct: 118 FPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP 177
Query: 148 QRD-----------------------------ASAFPWNSLISGYAQLGLYDDAIALYFQ 178
+ D +A W ++ISGY Q + +A+ L+ +
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
M VEPD + L CA LG LE G+ +H + + D + L+DMY KCG
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 239 IVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG 298
+ +A ++F + ++ +W ++++ Y +HG EA+ F +M G KP+ ++ + +LT
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 299 VSSMDLGVQIHGWVIRRGVEWNLSIANS------LIIAYSKHGRLDTARWLFNLMPER-D 351
S G+ G +I +E + ++ + ++ + G LD A+ MP + +
Sbjct: 358 CSYT--GLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 415
Query: 352 VVSWNSIISAHCKHREALALFEQMEEAGVKPD 383
V W +++ A C+ + + L E++ E + D
Sbjct: 416 AVIWGALLKA-CRIHKNIELGEEIGEILIAID 446
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/413 (30%), Positives = 216/413 (52%), Gaps = 17/413 (4%)
Query: 115 LLRKNVGVTSKLVRLYASFGYM-EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAI 173
L NV ++SKLV Y+ ++ + +F M R+ F WN +I +++ G +I
Sbjct: 61 FLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNI--FSWNIIIGEFSRSGFASKSI 118
Query: 174 ALYFQMVEEG-VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDM 232
L+ +M E V PD FT P +L+ C+ + G+ +H ++ GF + +ALV M
Sbjct: 119 DLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIM 178
Query: 233 YPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
Y G ++ ARK+F+ M RDSV + +M YV G + + F +M G D V +
Sbjct: 179 YVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVM 238
Query: 293 STILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE 349
++L + ++ G +HGW IRR L++ N++ Y K LD A +F M
Sbjct: 239 VSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSR 298
Query: 350 RDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
RDV+SW+S+I + + + LF++M + G++P+ +TF+ +LSACA+ GLV
Sbjct: 299 RDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLY 358
Query: 407 YALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSC 464
+ LM E Y I P ++H+ + + RAG++E+A + D P + GA+L C
Sbjct: 359 FRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLED----MPVKPDEAVMGAVLSGC 413
Query: 465 YLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDR 517
++G+V +GE A +L L+P + L +Y AGR ++ E +R + ++
Sbjct: 414 KVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEK 466
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 163/376 (43%), Gaps = 54/376 (14%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E +R D +L C S+ + G +H L + ++ V+S LV +Y G +
Sbjct: 127 ESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLL 186
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
A LFD M RD+ + ++ GY Q G +A++ +M G D +L
Sbjct: 187 HARKLFDDMPVRDSVLY--TAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C LG L+ G+ VH +R GL L NA+ DMY KC + A +F M RRD +S
Sbjct: 245 CGQLGALKHGKSVHGWCIRRC-SCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRG 316
W+S++ Y G V + F +M+ EG +P+ V+ +L+ +
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACA---------------- 347
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWL-FNLMPERDVVS----WNSIISAHCKHREALAL 371
HG L WL F LM E ++V + S+ A C R L
Sbjct: 348 -----------------HGGLVEKSWLYFRLMQEYNIVPELKHYASV--ADCMSRA--GL 386
Query: 372 FEQ----MEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKP-IMEHHGCM 426
E+ +E+ VKPD+ ++LS C G V G R + E ++KP ++ +
Sbjct: 387 LEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGER---VARELIQLKPRKASYYVTL 443
Query: 427 VNLYGRAGMVEKAYSI 442
LY AG ++A S+
Sbjct: 444 AGLYSAAGRFDEAESL 459
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 230/443 (51%), Gaps = 18/443 (4%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ +G+ +D + S++ TC ++ Q+H L + V + L+ Y+ G +
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
E +F QMS+R+ + W ++IS DDA++++ M +GV P+ TF ++
Sbjct: 328 EAVKSVFHQMSERNVVS--WTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
++ G ++H ++ GF ++ N+ + +Y K + A+K F + R+ +S
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 440
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS-----SMDLGVQIHGW 311
WN+M++ + +G EA+ F E P+ + ++L ++ S+ G + H
Sbjct: 441 WNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---A 368
+++ G+ ++++L+ Y+K G +D + +FN M +++ W SIISA+ H +
Sbjct: 500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETV 559
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
+ LF +M + V PD +TF+S+L+AC G+V+ G ++ +M E Y ++P EH+ CMV+
Sbjct: 560 MNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVD 619
Query: 429 LYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNE 488
+ GRAG +++A ++++ G G + ++L SC LHG+V +G A +++P+
Sbjct: 620 MLGRAGRLKEAEELMSEVPG--GPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELS 677
Query: 489 HNFALLMKIYENAGRLEDMERVR 511
++ + IY + +R
Sbjct: 678 GSYVQMYNIYAEKEEWDKAAEIR 700
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 170/315 (53%), Gaps = 15/315 (4%)
Query: 101 IRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLI 160
++ G Q+H T V V++ ++ +Y G ++A +F+ + D WN+++
Sbjct: 92 LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLV--DPDVVSWNTIL 149
Query: 161 SGYAQLGLYDDAIALYF--QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAG 218
SG+ D+ IAL F +M GV D FT+ L C G +G ++ V+ G
Sbjct: 150 SGFD-----DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG 204
Query: 219 FGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG-LEVEAMDTF 277
+D + N+ + MY + G AR++F+ M +D +SWNS+L+ G EA+ F
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 278 CQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKH 334
M+ EG + D VS ++++T + + L QIHG I+RG E L + N L+ YSK
Sbjct: 265 RDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC 324
Query: 335 GRLDTARWLFNLMPERDVVSWNSIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSAC 394
G L+ + +F+ M ER+VVSW ++IS++ +A+++F M GV P+++TFV L++A
Sbjct: 325 GVLEAVKSVFHQMSERNVVSWTTMISSN--KDDAVSIFLNMRFDGVYPNEVTFVGLINAV 382
Query: 395 AYLGLVNDGVRLYAL 409
+ +G++++ L
Sbjct: 383 KCNEQIKEGLKIHGL 397
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 225/476 (47%), Gaps = 56/476 (11%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G+ D Y++ L C S+ G Q+ + L ++ V + + +Y+ G A
Sbjct: 169 GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYD-DAIALYFQMVEEGVEPDLFTFPRVLKVC 198
+FD+MS +D WNSL+SG +Q G + +A+ ++ M+ EGVE D +F V+ C
Sbjct: 229 RRVFDEMSFKD--MISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
L++ ++H ++ G+ + N L+ Y KCG + + +F++M R+ VSW
Sbjct: 287 CHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWT 346
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRR 315
+M+++ + +A+ F M +G P+ V+ ++ V + G++IHG I+
Sbjct: 347 TMISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKT 401
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
G S+ NS I Y+K L+ A+ F + R+++SWN++IS ++ EAL +F
Sbjct: 402 GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF 461
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLG--LVNDGVRLYA-LMTEKYKIKPIMEHHGCMVNL 429
A P++ TF S+L+A A+ V G R +A L+ P++ ++++
Sbjct: 462 LS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDM 518
Query: 430 YGRAGMVEKAYSIITD------------------------------GIGSEAAGP--TQW 457
Y + G ++++ + + + E P +
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF 578
Query: 458 GALLYSCYLHGSVAIGEIAAN---KLFDLEPDNEHNFALLMKIYENAGRLEDMERV 510
++L +C G V G N ++++LEP +EH ++ ++ + AGRL++ E +
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH-YSCMVDMLGRAGRLKEAEEL 633
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 156/315 (49%), Gaps = 17/315 (5%)
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALY---FQMVEEGVEPDLFTFPRVL 195
AH LFD SQR+A+ N IS + A++++ Q+ G D T L
Sbjct: 27 AHKLFDGSSQRNATT-SINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
K C G L+ G ++H + +GF + NA++ MY K G A IF + D V
Sbjct: 86 KACRGD--LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT---GVSSMDLGVQIHGWV 312
SWN++L+ + + + A++ +M G D + ST L+ G LG+Q+ V
Sbjct: 144 SWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR----EA 368
++ G+E +L + NS I YS+ G AR +F+ M +D++SWNS++S + EA
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
+ +F M GV+ D ++F S+++ C + + +++ L K + ++E +++
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCI-KRGYESLLEVGNILMS 319
Query: 429 LYGRAGMVEKAYSII 443
Y + G++E S+
Sbjct: 320 RYSKCGVLEAVKSVF 334
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 276 TFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHG 335
T C + L+ C+ D + G QIHG+ G + ++N+++ Y K G
Sbjct: 80 TLC-LALKACRGD-------------LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAG 125
Query: 336 RLDTARWLFNLMPERDVVSWNSIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACA 395
R D A +F + + DVVSWN+I+S ++ AL +M+ AGV D T+ + LS C
Sbjct: 126 RFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFC- 184
Query: 396 YLGLVNDGVRLYALMTEKYKIKPIMEHH----GCMVNLYGRAGMVEKAYSIITD 445
V L L + +K +E + +Y R+G A + +
Sbjct: 185 ----VGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE 234
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 244/478 (51%), Gaps = 55/478 (11%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRK--NVGVTSKLVRLYASFGYMEDAHDLFDQMSQ 148
LL C +R G ++H ++ T L+K +++ L + YAS G M A LFD++
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 149 RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
+ W +L+S +++ GL +++ L+ +M + VE D + + VCA L L +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV---------------------------- 240
+ H AV+ G NAL+DMY KCG +
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 241 ---KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE-GCKPDFVSISTIL 296
+ R++F+ M R++V+W M+ Y+ G E ++ +MV G +FV++ ++L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 297 TGVS---SMDLGVQIHGWVIRR----GVEW---NLSIANSLIIAYSKHGRLDTARWLFNL 346
+ + ++ +G +H + +++ G E ++ + +L+ Y+K G +D++ +F L
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 347 MPERDVVSWNSIISA---HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG 403
M +R+VV+WN++ S H K R + +F QM VKPD +TF ++LSAC++ G+V++G
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEG 370
Query: 404 VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALL 461
R + + Y ++P ++H+ CMV+L GRAG++E+A ++ + P + G+LL
Sbjct: 371 WRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMRE----MPVPPNEVVLGSLL 425
Query: 462 YSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
SC +HG V I E +L + P N L+ +Y GR + + +R L RG+
Sbjct: 426 GSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGI 483
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 236/509 (46%), Gaps = 85/509 (16%)
Query: 92 LETCYRSQA----IRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
+ TC + A + G Q H + + + + + L+ Y G +E A +FD+M
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
++D WN +ISGY Q GL +DAI + M E ++ D T ++ A L++G
Sbjct: 337 EKDV--VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLG 394
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
+EV + +R F +D + + ++DMY KCG IV A+K+F+ +D + WN++L AY
Sbjct: 395 KEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAES 454
Query: 268 GLEVEAM-----------------------------------DTFCQMVLEGCKPDFVSI 292
GL EA+ D F QM G P+ +S
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISW 514
Query: 293 STILTG--------------------------------------VSSMDLGVQIHGWVIR 314
+T++ G ++S+ +G IHG++IR
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR 574
Query: 315 RGVEWNL-SIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALA 370
+L SI SL+ Y+K G ++ A +F ++ N++ISA+ + +EA+A
Sbjct: 575 NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIA 634
Query: 371 LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLY 430
L+ +E G+KPD IT ++LSAC + G +N + ++ + K +KP +EH+G MV+L
Sbjct: 635 LYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLL 694
Query: 431 GRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHN 490
AG EKA +I + A Q +L+ SC + + + KL + EP+N N
Sbjct: 695 ASAGETEKALRLIEEMPFKPDARMIQ--SLVASCNKQRKTELVDYLSRKLLESEPENSGN 752
Query: 491 FALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ + Y G +++ ++R M+ +GL
Sbjct: 753 YVTISNAYAVEGSWDEVVKMREMMKAKGL 781
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 183/342 (53%), Gaps = 10/342 (2%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVH-RLIPT-VLLRKN 119
K+ I++ L + + +RI PEIY +L+ C + + G Q+H R++ +N
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARN 106
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM 179
+ +KLV YA +E A LF ++ R+ F W ++I ++GL + A+ + +M
Sbjct: 107 EYIETKLVIFYAKCDALEIAEVLFSKLRVRNV--FSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
+E + PD F P V K C L G VH + V++G + ++L DMY KCG +
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224
Query: 240 VKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV 299
A K+F+ + R++V+WN+++ YV +G EA+ F M +G +P V++ST L+
Sbjct: 225 DDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 300 SSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWN 356
++M + G Q H I G+E + + SL+ Y K G ++ A +F+ M E+DVV+WN
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 357 SIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACA 395
IIS + + +A+ + + M +K D +T +L+SA A
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 197/370 (53%), Gaps = 11/370 (2%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+E I D + ++ + C + R G VH + L V V S L +Y G +
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
+DA +FD++ R+A A WN+L+ GY Q G ++AI L+ M ++GVEP T L
Sbjct: 225 DDASKVFDEIPDRNAVA--WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLS 282
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
A +G +E G++ H A+ G D + +L++ Y K G I A +F+RM +D V+
Sbjct: 283 ASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVT 342
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQ-MVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWV 312
WN +++ YV GL VE CQ M LE K D V+++T+++ + ++ LG ++ +
Sbjct: 343 WNLIISGYVQQGL-VEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HREAL 369
IR E ++ +A++++ Y+K G + A+ +F+ E+D++ WN++++A+ + EAL
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
LF M+ GV P+ IT+ ++ + G V++ ++ L + I P + M+N
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWTTMMNG 520
Query: 430 YGRAGMVEKA 439
+ G E+A
Sbjct: 521 MVQNGCSEEA 530
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 181/387 (46%), Gaps = 23/387 (5%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIR--HGSQVHRLIPTVLLRKN 119
K +I K ++++EK + + + A+ E+ +A+R +G Q+ + P V+ N
Sbjct: 422 KCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW-N 480
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYF 177
+ + S L G +++A D+F QM + W ++++G Q G ++AI
Sbjct: 481 LIILSLLRN-----GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLR 535
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NALVDMYPKC 236
+M E G+ P+ F+ L CA L L +G +H + +R + + + +LVDMY KC
Sbjct: 536 KMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKC 595
Query: 237 GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
G I KA K+F + N+M++AY +G EA+ + + G KPD ++I+ +L
Sbjct: 596 GDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVL 655
Query: 297 TGVS---SMDLGVQIHGWVI-RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV 352
+ + ++ ++I ++ +R ++ L ++ + G + A L MP +
Sbjct: 656 SACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPD 715
Query: 353 VSWNSIISAHCKHREALALFEQMEEAGVKP---DKITFVSLLSACAYLGLVNDGVRLYAL 409
+ A C + L + + ++ + +V++ +A A G ++ V++ +
Sbjct: 716 ARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREM 775
Query: 410 MTEKYKIKPIMEHHGCM-VNLYGRAGM 435
M K K + + GC + + G G+
Sbjct: 776 M----KAKGLKKKPGCSWIQITGEEGV 798
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 234/451 (51%), Gaps = 14/451 (3%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLR-KNVGVTSKLVRLYASFGYME 137
+G+ + Y ++ C + + G Q+H L+ N+ V + LV Y++ G +
Sbjct: 207 EGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLS 266
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
+ F+ + ++D WNS++S A G D++ L+ +M G P + F L
Sbjct: 267 GSMRSFNAVPEKDV--ISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNF 324
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C+ ++ G+++H + ++ GF L + +AL+DMY KC I + ++ + +
Sbjct: 325 CSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLEC 384
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS-----SMDLGVQIHGW 311
NS++T+ +H G+ + ++ F M+ EG D V++ST+L +S S+ +H
Sbjct: 385 CNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCC 444
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REA 368
I+ G +++++ SLI AY+K G+ + +R +F+ + ++ SII+ + ++ +
Sbjct: 445 AIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDC 504
Query: 369 LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
+ + +M+ + PD++T +S+LS C++ GLV +G ++ + KY I P + + CMV+
Sbjct: 505 VKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVD 564
Query: 429 LYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNE 488
L GRAG+VEKA ++ G A W +LL SC +H + IG AA L +LEP+N
Sbjct: 565 LLGRAGLVEKAERLLLQARGD--ADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENF 622
Query: 489 HNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ + K Y G E ++R + R L
Sbjct: 623 AVYIQVSKFYFEIGDFEISRQIREIAASREL 653
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 157/315 (49%), Gaps = 13/315 (4%)
Query: 134 GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
G + AH+ FD+MS RD +N LISG ++ G AI LY +MV G+ TFP
Sbjct: 60 GNLLSAHEAFDEMSVRDV--VTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
VL VC+ G +VH + GFG + +ALV +Y + A K+F+ M R+
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHG 310
N +L + G + + +M LEG + ++ ++ G S L G Q+H
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 311 WVIRRGVEWNLS---IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH-- 365
V++ G WN+S +AN L+ YS G L + FN +PE+DV+SWNSI+S +
Sbjct: 238 LVVKSG--WNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGS 295
Query: 366 -REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHG 424
++L LF +M+ G +P F+S L+ C+ + G +++ + + +
Sbjct: 296 VLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQS 355
Query: 425 CMVNLYGRAGMVEKA 439
++++YG+ +E +
Sbjct: 356 ALIDMYGKCNGIENS 370
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 166/325 (51%), Gaps = 10/325 (3%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ G+R + S+L C R G QVH + ++ N+ V S LV LYA +
Sbjct: 104 VSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLV 163
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
+ A LFD+M R+ + N L+ + Q G +Y +M EGV + T+ +++
Sbjct: 164 DVALKLFDEMLDRNLAV--CNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR 221
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDSV 255
C+ L+ G+++H V++G+ + + N LVD Y CG + + + FN + +D +
Sbjct: 222 GCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVI 281
Query: 256 SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWV 312
SWNS+++ +G ++++D F +M G +P F+S + S + G QIH +V
Sbjct: 282 SWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYV 341
Query: 313 IRRGVEW-NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA--HCK-HREA 368
++ G + +L + ++LI Y K ++ + L+ +P ++ NS++++ HC ++
Sbjct: 342 LKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDI 401
Query: 369 LALFEQMEEAGVKPDKITFVSLLSA 393
+ +F M + G D++T ++L A
Sbjct: 402 IEMFGLMIDEGTGIDEVTLSTVLKA 426
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 236/509 (46%), Gaps = 75/509 (14%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS----------- 132
D + ++L TC ++ G ++ L+ ++ V + L+ +Y
Sbjct: 69 DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVF 128
Query: 133 -----------------FGYM-----EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYD 170
F YM E A D+F +M +R AF WN +ISG+A G +
Sbjct: 129 RDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKR--VAFAWNIMISGHAHCGKLE 186
Query: 171 DAIALYFQMVEEGVEPDLFTFPRVLKVCAG--------------------LGLLEVGEEV 210
++L+ +M+E +PD +TF ++ C+ +E V
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 211 HRHAVRAGFGNDGL------------GLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
+ G +D + N+++D K G KA ++F+ ++ V+W
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRR 315
+M+T Y +G +A+ F +M+ G D + +L S + L G IHG +I
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHC 366
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
G + + N+L+ Y+K G + A F + +D+VSWN+++ A H +AL L+
Sbjct: 367 GFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLY 426
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
+ M +G+KPD +TF+ LL+ C++ GLV +G ++ M + Y+I ++H CM++++GR
Sbjct: 427 DNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGR 486
Query: 433 AGMVEKAYSIIT--DGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHN 490
G + +A + T + ++++ + W LL +C H +G + L EP E +
Sbjct: 487 GGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMS 546
Query: 491 FALLMKIYENAGRLEDMERVRMMLVDRGL 519
F LL +Y + GR ++ E VR +V+RG+
Sbjct: 547 FVLLSNLYCSTGRWKEGEDVRREMVERGM 575
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 212/464 (45%), Gaps = 89/464 (19%)
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM 179
V +TSK+ L S G + A +FD M + D A WN++++ Y++LGL+ +AIAL+ Q+
Sbjct: 5 VRLTSKIASLAKS-GRIASARQVFDGMPELDTVA--WNTMLTSYSRLGLHQEAIALFTQL 61
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
+PD ++F +L CA LG ++ G ++ +R+GF N+L+DMY KC
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 240 VKARKIFNRM--HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQM----------------- 280
+ A K+F M R+ V+W S+L AY++ A+D F +M
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 281 --VLEGC------------KPDFVSISTILTGVSS----MDLGVQIHGWVIRRGVEWNLS 322
LE C KPD + S+++ S+ + G +H +++ G +
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 323 IANSLIIAYSKHGRLDTA-------------RW------------------LFNLMPERD 351
NS++ Y+K G D A W +F+L PE++
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 352 VVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
+V+W ++I+ + ++ +AL F +M ++GV D + ++L AC+ L L+ G ++
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 409 LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
+ + +VNLY + G +++A D + W +L++ +HG
Sbjct: 362 CLIH-CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDL---VSWNTMLFAFGVHG 417
Query: 469 SVAIGEIAANKLFD------LEPDNEHNFALLMKIYENAGRLED 506
A KL+D ++PDN F L+ ++G +E+
Sbjct: 418 LAD----QALKLYDNMIASGIKPDNV-TFIGLLTTCSHSGLVEE 456
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 38/298 (12%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
EQ L+ ++ G+ D Y ++L C + HG +H + + V + L
Sbjct: 319 EQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNAL 378
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
V LYA G +++A F ++ +D WN+++ + GL D A+ LY M+ G++P
Sbjct: 379 VNLYAKCGDIKEADRAFGDIANKDL--VSWNTMLFAFGVHGLADQALKLYDNMIASGIKP 436
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAV---RAGFGNDGLGLNALVDMYPKCGHIVKAR 243
D TF +L C+ GL+E G + V R D + ++DM+ + GH+ +A+
Sbjct: 437 DNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVD--HVTCMIDMFGRGGHLAEAK 494
Query: 244 KIFNR-----MHRRDSVSWNSMLTAYVHH-----GLEVEAMDTFCQMVLEGCKP----DF 289
+ ++ SW ++L A H G EV VL+ +P F
Sbjct: 495 DLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSK-------VLKIAEPSEEMSF 547
Query: 290 VSISTILTGVSSMDLGVQIHGWVIRRGVE------WNLSIAN---SLIIAYSKHGRLD 338
V +S + G + ++ RG++ W + + N + ++ S H RL+
Sbjct: 548 VLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSW-IEVGNQVSTFVVGDSSHPRLE 604
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 222/441 (50%), Gaps = 19/441 (4%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
+ +++ C+RS + ++ +P K+ + +V Y FG ++DA LF QM
Sbjct: 131 WTAMVNGCFRSGKVDQAERLFYQMPV----KDTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
++ W ++I G Q +A+ L+ M+ ++ F V+ CA +G
Sbjct: 187 GKNV--ISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
+VH ++ GF + +L+ Y C I +RK+F+ W ++L+ Y +
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIA 324
+A+ F M+ P+ + ++ L S ++D G ++HG ++ G+E + +
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVG 364
Query: 325 NSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVK 381
NSL++ YS G ++ A +F + ++ +VSWNSII + H + + A +F QM +
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKE 424
Query: 382 PDKITFVSLLSACAYLGLVNDGVRLYALMTEKYK-IKPIMEHHGCMVNLYGRAGMVEKAY 440
PD+ITF LLSAC++ G + G +L+ M+ I ++H+ CMV++ GR G +++A
Sbjct: 425 PDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAE 484
Query: 441 SIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIY 498
+I + P + W ALL +C +H V GE AA +F+L+ + + LL IY
Sbjct: 485 ELIERMV----VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540
Query: 499 ENAGRLEDMERVRMMLVDRGL 519
+AGR ++ ++R+ + G+
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGI 561
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 195/417 (46%), Gaps = 29/417 (6%)
Query: 98 SQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWN 157
S+ I +V +P+ +V + +K++ Y + DA +LFD+M RD + WN
Sbjct: 48 SRRIDEAREVFNQVPS----PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS--WN 101
Query: 158 SLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV-HRHAVR 216
S+ISG + G + A+ L+ +M E V ++ ++ C G ++ E + ++ V+
Sbjct: 102 SMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPVK 157
Query: 217 AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDT 276
D N++V Y + G + A K+F +M ++ +SW +M+ + EA+D
Sbjct: 158 -----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDL 212
Query: 277 FCQMV---LEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSK 333
F M+ ++ F + T + +G+Q+HG +I+ G + ++ SLI Y+
Sbjct: 213 FKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 334 HGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSL 390
R+ +R +F+ V W +++S + KH +AL++F M + P++ TF S
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 391 LSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSE 450
L++C+ LG ++ G ++ + K ++ +V +Y +G V A S+ I
Sbjct: 333 LNSCSALGTLDWGKEMHGVAV-KLGLETDAFVGNSLVVMYSDSGNVNDAVSVF---IKIF 388
Query: 451 AAGPTQWGALLYSCYLHGSVAIGEIAANKLFDL--EPDNEHNFALLMKIYENAGRLE 505
W +++ C HG + ++ L EPD E F L+ + G LE
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD-EITFTGLLSACSHCGFLE 444
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 7/205 (3%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
E L + I + +AS L +C + G ++H + + L + V + L
Sbjct: 308 EDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSL 367
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
V +Y+ G + DA +F ++ ++ S WNS+I G AQ G A ++ QM+ EP
Sbjct: 368 VVMYSDSGNVNDAVSVFIKIFKK--SIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL---NALVDMYPKCGHIVKAR 243
D TF +L C+ G LE G ++ + + +G + + +VD+ +CG + +A
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAE 484
Query: 244 KIFNRM-HRRDSVSWNSMLTAYVHH 267
++ RM + + + W ++L+A H
Sbjct: 485 ELIERMVVKPNEMVWLALLSACRMH 509
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 198/386 (51%), Gaps = 46/386 (11%)
Query: 175 LYFQMVEEGVEPDLFTFPRVLKVCAGL--GLLEVGEEVHRHAVRAGFGNDGLGLNALVDM 232
+ +M V PD TFP V K CA G L + + +H A+R G +D LN L+ +
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 233 YP-------------------------------KCGHIVKARKIFNRMHRRDSVSWNSML 261
Y K IV+AR++F+ M RD VSWNS++
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVE 318
+ Y EA+ F +MV G KPD V+I + L+ + G IH + R+ +
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 319 WNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQM 375
+ +A L+ Y+K G +DTA +F L ++ + +WN++I+ H + F +M
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM 341
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGM 435
+G+KPD +TF+S+L C++ GLV++ L+ M Y + M+H+GCM +L GRAG+
Sbjct: 342 VSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGL 401
Query: 436 VEKAYSII----TDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNF 491
+E+A +I DG E W LL C +HG++ I E AAN++ L P++ +
Sbjct: 402 IEEAAEMIEQMPKDGGNREKL--LAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVY 459
Query: 492 ALLMKIYENAGRLEDMERVRMMLVDR 517
+++++Y NA R E++ +VR ++DR
Sbjct: 460 KVMVEMYANAERWEEVVKVR-EIIDR 484
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A +LFD M RD + WNSLISGYAQ+ +AI L+ +MV G++PD L C
Sbjct: 202 ARELFDSMPLRDLVS--WNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSAC 259
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
A G + G+ +H + R D LVD Y KCG I A +IF + +WN
Sbjct: 260 AQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWN 319
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
+M+T HG +D F +MV G KPD V+ ++L G S
Sbjct: 320 AMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 58 YPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLR 117
Y Q H + +K + + G++ D S L C +S + G +H L
Sbjct: 224 YAQMNH--CREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
+ + + LV YA G+++ A ++F+ S D + F WN++I+G A G + + +
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCS--DKTLFTWNAMITGLAMHGNGELTVDYFR 339
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF--GNDGLGLNALVDMYPK 235
+MV G++PD TF VL C+ GL++ + +R+ + + + D+ +
Sbjct: 340 KMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQ-MRSLYDVNREMKHYGCMADLLGR 398
Query: 236 CGHIVKARKIFNRM-----HRRDSVSWNSMLTAYVHHG 268
G I +A ++ +M +R ++W+ +L HG
Sbjct: 399 AGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHG 436
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 229/454 (50%), Gaps = 28/454 (6%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM--E 137
G+ D Y LL+ C + +H I + L ++ V + L+ Y+ G +
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVR 171
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGV---EPDLFTFPRV 194
DA LF++MS+RD + WNS++ G + G DA L+ +M + + L + R
Sbjct: 172 DAMKLFEKMSERDTVS--WNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARC 229
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH--RR 252
++ L E E + + + +V Y K G + AR +F++M +
Sbjct: 230 REMSKAFELFEKMPE-----------RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK 278
Query: 253 DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIH 309
+ V+W ++ Y GL EA QMV G K D ++ +IL + + LG++IH
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHR 366
+ R + N + N+L+ Y+K G L A +FN +P++D+VSWN+++ H +
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGK 398
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCM 426
EA+ LF +M G++PDK+TF+++L +C + GL+++G+ + M + Y + P +EH+GC+
Sbjct: 399 EAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCL 458
Query: 427 VNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD 486
V+L GR G +++A ++ WGALL +C +H V I + + L L+P
Sbjct: 459 VDLLGRVGRLKEAIKVVQ--TMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPC 516
Query: 487 NEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
+ N++LL IY A E + +R + G++
Sbjct: 517 DPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVE 550
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 217/448 (48%), Gaps = 40/448 (8%)
Query: 87 IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM 146
I+ L+ + + Q+H I L +++ + KL+ + A +F+Q+
Sbjct: 18 IFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQV 77
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEV 206
+ + NSLI +AQ A ++ +M G+ D FT+P +LK C+G L V
Sbjct: 78 QEPNVHLC--NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV 135
Query: 207 GEEVHRHAVRAGFGNDGLGLNALVDMYPKCG--HIVKARKIFNRMHRRDSVSWNSMLTAY 264
+ +H H + G +D NAL+D Y +CG + A K+F +M RD+VSWNSML
Sbjct: 136 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL 195
Query: 265 VHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRG-VEWN 320
V G +A F +M + D +S +T+L G + M ++ + R V W
Sbjct: 196 VKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSW- 250
Query: 321 LSIANSLIIAYSKHGRLDTARWLFNLM--PERDVVSWNSIISAHCKH---REALALFEQM 375
+++++ YSK G ++ AR +F+ M P ++VV+W II+ + + +EA L +QM
Sbjct: 251 ----STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQM 306
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGM 435
+G+K D +S+L+AC GL++ G+R+++++ ++ + ++++Y + G
Sbjct: 307 VASGLKFDAAAVISILAACTESGLLSLGMRIHSIL-KRSNLGSNAYVLNALLDMYAKCGN 365
Query: 436 VEKAYSIITDGIGSEAAGPTQWGALLY--SCYLHGSVAIGEIAANKLFDLEPDNEHNFAL 493
++KA+ + D + W +L+ + HG AI + + + PD A+
Sbjct: 366 LKKAFDVFNDIPKKDL---VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAV 422
Query: 494 LMKIYENAGRLEDMERVRMMLVDRGLDY 521
L +AG L+D G+DY
Sbjct: 423 LCSC-NHAG-----------LIDEGIDY 438
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 73 IEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS 132
++ + G++ D S+L C S + G ++H ++ L N V + L+ +YA
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAK 362
Query: 133 FGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFP 192
G ++ A D+F+ + ++D + WN+++ G G +AI L+ +M EG+ PD TF
Sbjct: 363 CGNLKKAFDVFNDIPKKDLVS--WNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Query: 193 RVLKVCAGLGLLEVG-------EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
VL C GL++ G E+V+ + LVD+ + G + +A K+
Sbjct: 421 AVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH------YGCLVDLLGRVGRLKEAIKV 474
Query: 246 FNRMHRRDSVS-WNSMLTAYVHHG---LEVEAMDTFCQMVLEGCKP-DFVSISTILTGVS 300
M +V W ++L A H + E +D + L+ C P ++ +S I
Sbjct: 475 VQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVK--LDPCDPGNYSLLSNIYAAAE 532
Query: 301 SMDLGVQIHGWVIRRGVE 318
+ I + GVE
Sbjct: 533 DWEGVADIRSKMKSMGVE 550
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 222/415 (53%), Gaps = 21/415 (5%)
Query: 117 RKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALY 176
+KN ++ L+ Y G + +A +FD+M R + WN++I+G Q ++ ++L+
Sbjct: 22 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTT--WNAMIAGLIQFEFNEEGLSLF 79
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
+M G PD +T V AGL + +G+++H + ++ G D + ++L MY +
Sbjct: 80 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 139
Query: 237 GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
G + + M R+ V+WN+++ +G + + M + GC+P+ ++ T+L
Sbjct: 140 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 199
Query: 297 TGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVV 353
+ S + + G QIH I+ G +++ +SLI YSK G L A F+ + D V
Sbjct: 200 SSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEV 259
Query: 354 SWNSIISA---HCKHREALALFEQM-EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYAL 409
W+S+ISA H + EA+ LF M E+ ++ +++ F++LL AC++ GL + G+ L+ +
Sbjct: 260 MWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDM 319
Query: 410 MTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ-----WGALLYSC 464
M EKY KP ++H+ C+V+L GRAG +++A +II + P + W LL +C
Sbjct: 320 MVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR-------SMPIKTDIVIWKTLLSAC 372
Query: 465 YLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+H + + + ++ ++P++ + LL ++ +A R D+ VR + D+ +
Sbjct: 373 NIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNV 427
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 10/297 (3%)
Query: 80 GIRIDPEIY--ASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
G+ P+ Y S+ +++ G Q+H L ++ V S L +Y G ++
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
D + M R+ A WN+LI G AQ G + + LY M G P+ TF VL
Sbjct: 144 DGEIVIRSMPVRNLVA--WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSS 201
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
C+ L + G+++H A++ G + +++L+ MY KCG + A K F+ D V W
Sbjct: 202 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 261
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMV----LEGCKPDFVSISTILTGVSSMDLGVQIHGWVI 313
+SM++AY HG EA++ F M +E + F+++ + D G+++ ++
Sbjct: 262 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 321
Query: 314 RR-GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISAHCKHREA 368
+ G + L ++ + G LD A + MP + D+V W +++SA H+ A
Sbjct: 322 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNA 378
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/422 (32%), Positives = 210/422 (49%), Gaps = 61/422 (14%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
L TC ++ Q+H I L + + +L+ + +SFG + A +F+Q+ +
Sbjct: 26 FLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQL--QS 80
Query: 151 ASAFPWNSLISGYAQLGLYDDAIALY-FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
S F WN +I + +A+ L+ M+ + D FTFP V+K C + +G +
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF----------------------- 246
VH A++AGF ND N L+D+Y KCG RK+F
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 247 --------NRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL-- 296
N+M R+ VSW +M+TAYV + EA F +M ++ KP+ +I +L
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 297 -TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSW 355
T + S+ +G +H + + G + + +LI YSK G L AR +F++M + + +W
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 356 NSIISA---HCKHREALALFEQMEE-AGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
NS+I++ H EAL+LFE+MEE A V+PD ITFV +LSACA G V DG+R + M
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII-----------------TDGIGSEAAGP 454
+ Y I PI EH+ CM+ L +A VEKA +++ TDG+ P
Sbjct: 381 QVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNSSFGNEYTDGMNETNETP 440
Query: 455 TQ 456
+Q
Sbjct: 441 SQ 442
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 135/302 (44%), Gaps = 42/302 (13%)
Query: 42 SFPKPKSTPLLIHQQPYPQT------------KHQAIEQVLKDIEASIEKGIRIDPEIYA 89
SF + + L+ +Q P T H+ E +L I I + D +
Sbjct: 64 SFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFP 123
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM--- 146
+++ C S +IR G+QVH L +V + L+ LY G + +FD+M
Sbjct: 124 FVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGR 183
Query: 147 ---------------SQRDAS-----------AFPWNSLISGYAQLGLYDDAIALYFQMV 180
SQ D++ W ++I+ Y + D+A L+ +M
Sbjct: 184 SIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQ 243
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
+ V+P+ FT +L+ LG L +G VH +A + GF D AL+DMY KCG +
Sbjct: 244 VDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQ 303
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG-CKPDFVSISTILTGV 299
ARK+F+ M + +WNSM+T+ HG EA+ F +M E +PD ++ +L+
Sbjct: 304 DARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSAC 363
Query: 300 SS 301
++
Sbjct: 364 AN 365
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 67/372 (18%)
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
L+ C+ L+ ++H ++ ND L + L+ + G A +FN++ +
Sbjct: 27 LRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMVL----EGCKPDFVSISTILTGVSSMDLGVQIHG 310
+WN M+ + + EA+ F M++ + K F + SS+ LG Q+HG
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGR-------------------------------LDT 339
I+ G ++ N+L+ Y K G+ LD+
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 340 ARWLFNLMPERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAY 396
A +FN MP R+VVSW ++I+A+ K+R EA LF +M+ VKP++ T V+LL A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 397 LGLVNDG--VRLYALMTEKYKIKPIMEHH--GCMVNLYGRAGMVEKAYSIITDGIGSEAA 452
LG ++ G V YA +K +++ ++++Y + G ++ A + G A
Sbjct: 264 LGSLSMGRWVHDYA-----HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLA 318
Query: 453 GPTQWGALLYSCYLHGSVAIGEIAANKLF-------DLEPDNEHNFALLMKIYENAGRLE 505
W +++ S +HG GE A + LF +EPD F ++ N G ++
Sbjct: 319 ---TWNSMITSLGVHG---CGEEALS-LFEEMEEEASVEPD-AITFVGVLSACANTGNVK 370
Query: 506 DMER--VRMMLV 515
D R RM+ V
Sbjct: 371 DGLRYFTRMIQV 382
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 235/454 (51%), Gaps = 24/454 (5%)
Query: 82 RIDPEI----YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
R P++ + +L C G QVH L+ + L+ +Y+ +G++
Sbjct: 77 RASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLV 136
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
D+ +F+ + ++D WN+L+SG+ + G +A+ ++ M E VE FT V+K
Sbjct: 137 DSVRVFESVEEKDL--VSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKT 194
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH-RRDSVS 256
CA L +L+ G++VH V G LG A++ Y G I +A K++N ++ D V
Sbjct: 195 CASLKILQQGKQVHAMVVVTGRDLVVLG-TAMISFYSSVGLINEAMKVYNSLNVHTDEVM 253
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVI 313
NS+++ + + EA +++ +P+ +S+ L G S +G QIH +
Sbjct: 254 LNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVAL 308
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALA 370
R G + + N L+ Y K G++ AR +F +P + VVSW S+I A+ + + AL
Sbjct: 309 RNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALE 368
Query: 371 LFEQM--EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
+F +M E +GV P+ +TF+ ++SACA+ GLV +G + +M EKY++ P EH+ C ++
Sbjct: 369 IFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFID 428
Query: 429 LYGRAGMVEKAYSIITDGI--GSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLF-DLEP 485
+ +AG E+ + ++ + +++ W A+L +C L+ + GE A +L + P
Sbjct: 429 ILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGP 488
Query: 486 DNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+N + L+ Y G+ + +E +R L ++GL
Sbjct: 489 ENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGL 522
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 163/332 (49%), Gaps = 16/332 (4%)
Query: 119 NVGVTSKLVRLYASF--GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALY 176
NV V S + L F + A LFD++ QRD S+ S +S + + G +D +AL+
Sbjct: 15 NVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLN--SQLSSHLRSGNPNDTLALF 72
Query: 177 FQMVEEGVEPDL--FTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYP 234
Q+ PDL TF VL C+ L E G +VH ++ G + AL+DMY
Sbjct: 73 LQI--HRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYS 130
Query: 235 KCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSIST 294
K GH+V + ++F + +D VSWN++L+ ++ +G EA+ F M E + ++S+
Sbjct: 131 KYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSS 190
Query: 295 ILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN-LMPER 350
++ +S+ + G Q+H V+ G + + + ++I YS G ++ A ++N L
Sbjct: 191 VVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHT 249
Query: 351 DVVSWNSIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
D V NS+IS ++R F M +P+ S L+ C+ + G +++ +
Sbjct: 250 DEVMLNSLISGCIRNRNYKEAFLLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVA 307
Query: 411 TEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
+ +G M ++YG+ G + +A +I
Sbjct: 308 LRNGFVSDSKLCNGLM-DMYGKCGQIVQARTI 338
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 121/240 (50%), Gaps = 17/240 (7%)
Query: 81 IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
+ I +S+++TC + ++ G QVH ++ V R V + + ++ Y+S G + +A
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMV-VVTGRDLVVLGTAMISFYSSVGLINEAM 239
Query: 141 DLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAG 200
+++ ++ NSLISG + Y +A L + P++ L C+
Sbjct: 240 KVYNSLNVHTDEVM-LNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSD 293
Query: 201 LGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSM 260
L +G+++H A+R GF +D N L+DMY KCG IV+AR IF + + VSW SM
Sbjct: 294 NSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSM 353
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCK--PDFVSISTILTGVSSMDLGVQIHGWVIRRGVE 318
+ AY +G V+A++ F +M EG P+ V+ +++ + H +++ G E
Sbjct: 354 IDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACA--------HAGLVKEGKE 405
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 228/446 (51%), Gaps = 21/446 (4%)
Query: 82 RIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHD 141
R D + +++ C + +R GS VH L+ + K+V V + V Y + A
Sbjct: 107 RPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARK 166
Query: 142 LFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGL 201
+F +M +R+A + W +L+ Y + G ++A +++ M E +L ++ ++
Sbjct: 167 VFGEMPERNAVS--WTALVVAYVKSGELEEAKSMFDLMPER----NLGSWNALVD----- 215
Query: 202 GLLEVGEEVHRHAVRAGF-GNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSM 260
GL++ G+ V+ + D + +++D Y K G +V AR +F D +W+++
Sbjct: 216 GLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSAL 275
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGV 317
+ Y +G EA F +M + KPD + +++ S M +L ++ ++ +R
Sbjct: 276 ILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMN 335
Query: 318 EWNLS-IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFE 373
+++ + +LI +K G +D A LF MP+RD+VS+ S++ H EA+ LFE
Sbjct: 336 KFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFE 395
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
+M + G+ PD++ F +L C LV +G+R + LM +KY I +H+ C+VNL R
Sbjct: 396 KMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRT 455
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFAL 493
G +++AY +I A + WG+LL C LHG+ I E+ A LF+LEP + ++ L
Sbjct: 456 GKLKEAYELIKS--MPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVL 513
Query: 494 LMKIYENAGRLEDMERVRMMLVDRGL 519
L IY R D+ +R + + G+
Sbjct: 514 LSNIYAALDRWTDVAHLRDKMNENGI 539
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 135/253 (53%), Gaps = 15/253 (5%)
Query: 153 AFPWNSLISGYAQLGLYDDAIALYFQMVEEGV-EPDLFTFPRVLKVCAGLGLLEVGEEVH 211
+ WN LI GY+ L+ + +++ +M+ G+ PD +TFP V+KVC+ G + VG VH
Sbjct: 74 TYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVH 133
Query: 212 RHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEV 271
+R GF D + + VD Y KC + ARK+F M R++VSW +++ AYV G
Sbjct: 134 GLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELE 193
Query: 272 EAMDTFCQMVLEGCKPDFVSISTILTG-VSSMDL--GVQIHGWVIRRGVEWNLSIANSLI 328
EA F M + + S + ++ G V S DL ++ + +R ++ S+I
Sbjct: 194 EAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR----DIISYTSMI 245
Query: 329 IAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKI 385
Y+K G + +AR LF DV +W+++I + ++ EA +F +M VKPD+
Sbjct: 246 DGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEF 305
Query: 386 TFVSLLSACAYLG 398
V L+SAC+ +G
Sbjct: 306 IMVGLMSACSQMG 318
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 220/440 (50%), Gaps = 9/440 (2%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+G+ +D L+ C + G Q+H + L + S L+ +Y++ G +
Sbjct: 232 EGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIY 291
Query: 139 AHDLFDQMS-QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
A D+F Q ++S WNS++SG+ + A+ L Q+ + + D +T LK+
Sbjct: 292 AADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKI 351
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
C L +G +VH V +G+ D + + LVD++ G+I A K+F+R+ +D +++
Sbjct: 352 CINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAF 411
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIR 314
+ ++ V G A F +++ G D +S IL + ++S+ G QIHG I+
Sbjct: 412 SGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIK 471
Query: 315 RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALAL 371
+G E A +L+ Y K G +D LF+ M ERDVVSW II ++ EA
Sbjct: 472 KGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRY 531
Query: 372 FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYG 431
F +M G++P+K+TF+ LLSAC + GL+ + M +Y ++P +EH+ C+V+L G
Sbjct: 532 FHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLG 591
Query: 432 RAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNF 491
+AG+ ++A +I T W +LL +C H + + + A KL PD+ +
Sbjct: 592 QAGLFQEANELINK--MPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVY 649
Query: 492 ALLMKIYENAGRLEDMERVR 511
L Y G + + +VR
Sbjct: 650 TSLSNAYATLGMWDQLSKVR 669
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 202/405 (49%), Gaps = 53/405 (13%)
Query: 87 IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM 146
+Y+++L+ C I+ G V+ I LR +V + + +V +Y G + +A+ F ++
Sbjct: 109 MYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI 168
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE------------------------- 181
+ S+ WN+LISGY + GL D+A+ L+ +M +
Sbjct: 169 LR--PSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFL 226
Query: 182 -----EGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
EG+ D F P LK C+ GLL +G+++H V++G + ++AL+DMY C
Sbjct: 227 VRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNC 286
Query: 237 GHIVKARKIFN--RMHRRDSVS-WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSIS 293
G ++ A +F+ ++ SV+ WNSML+ ++ + E + ++L+ + D S
Sbjct: 287 GSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLIN----EENEAALWLLLQIYQSDLCFDS 342
Query: 294 TILTGV-------SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
L+G ++ LG+Q+H V+ G E + + + L+ ++ G + A LF+
Sbjct: 343 YTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHR 402
Query: 347 MPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG 403
+P +D+++++ +I K + A LF ++ + G+ D+ ++L C+ L + G
Sbjct: 403 LPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG 462
Query: 404 VRLYALMTEK-YKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGI 447
+++ L +K Y+ +P+ +V++Y + G ++ ++ DG+
Sbjct: 463 KQIHGLCIKKGYESEPVTAT--ALVDMYVKCGEIDNGV-VLFDGM 504
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 191/405 (47%), Gaps = 53/405 (13%)
Query: 83 IDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
+D ++ A+ L C + QA + G + + + +NV + + ++ +Y F + DAH +
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP-DLFTFPRVLKVCAGL 201
FD+MS+R+ W +++SGY G + AI LY +M++ E + F + VLK C +
Sbjct: 63 FDEMSERNI--VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV 120
Query: 202 GLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSML 261
G +++G V+ + D + +N++VDMY K G +++A F + R S SWN+++
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI 180
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS-------------------- 301
+ Y GL EA+ F +M +P+ VS + +++G
Sbjct: 181 SGYCKAGLMDEAVTLFHRMP----QPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVL 236
Query: 302 -----------------MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLF 344
+ +G Q+H V++ G+E + ++LI YS G L A +F
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Query: 345 N---LMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
+ L V WNS++S + E AL L Q+ ++ + D T L C
Sbjct: 297 HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYV 356
Query: 399 LVNDGVRLYAL-MTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
+ G+++++L + Y++ I+ +V+L+ G ++ A+ +
Sbjct: 357 NLRLGLQVHSLVVVSGYELDYIV--GSILVDLHANVGNIQDAHKL 399
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 245/503 (48%), Gaps = 87/503 (17%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASF---GYMEDAHDLFDQMS 147
L + C + IR Q+H + L N+ V +L+ AS G ++ AH LFD++
Sbjct: 18 LWQNC---KNIRTLKQIHASMVVNGLMSNLSVVGELI-YSASLSVPGALKYAHKLFDEIP 73
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV---------- 197
+ D S N ++ G AQ + ++LY +M + GV PD +TF VLK
Sbjct: 74 KPDVSIC--NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNG 131
Query: 198 ----------------------------CAGLG----LLEVGEEVHRHA---VRAGFGN- 221
C LG L + + H+ A + +G+
Sbjct: 132 FAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKR 191
Query: 222 ----------------DGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
D + N ++ KC + AR++F+R +D V+WN+M++ YV
Sbjct: 192 GKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYV 251
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWV-----IRRGV 317
+ G EA+ F +M G PD V+I ++L+ + ++ G ++H ++ + +
Sbjct: 252 NCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSI 311
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE--ALALFEQM 375
I N+LI Y+K G +D A +F + +RD+ +WN++I H ++ +FE+M
Sbjct: 312 YVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSIEMFEEM 371
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGM 435
+ V P+++TF+ ++ AC++ G V++G + ++LM + Y I+P ++H+GCMV++ GRAG
Sbjct: 372 QRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQ 431
Query: 436 VEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFAL 493
+E+A+ + S P W LL +C ++G+V +G+ A KL + D ++ L
Sbjct: 432 LEEAFMFVE----SMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVL 487
Query: 494 LMKIYENAGRLEDMERVRMMLVD 516
L IY + G+ + +++VR M D
Sbjct: 488 LSNIYASTGQWDGVQKVRKMFDD 510
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 220/459 (47%), Gaps = 83/459 (18%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASA--FPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
L+ Y G + A DL +M +A F W ++ISG G+ A+ ++ +M G
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV--- 240
V P+ T + C+ L ++ G EVH AV+ GF +D L N+LVDMY KCG +
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 241 ----------------------------KARKIFNRMH----RRDSVSWNSMLTAYVHHG 268
KA ++F RM R + ++WN+M++ Y+ +G
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG 467
Query: 269 LEVEAMDTFCQMVLEG------------------------------------CKPDFVSI 292
E EAMD F +M +G P+ V+I
Sbjct: 468 DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTI 527
Query: 293 STILTGVSSMDLGV----QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP 348
++L +++ LG +IHG V+RR ++ ++ N+L Y+K G ++ +R +F M
Sbjct: 528 LSLLPACANL-LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME 586
Query: 349 ERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVR 405
+D+++WNS+I + H ALALF QM+ G+ P++ T S++ A +G V++G +
Sbjct: 587 TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Query: 406 LYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCY 465
++ + Y I P +EH MV LYGRA +E+A I + + ++ P W + L C
Sbjct: 647 VFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQE-MNIQSETPI-WESFLTGCR 704
Query: 466 LHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRL 504
+HG + + AA LF LEP+N +++ +IY +L
Sbjct: 705 IHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKL 743
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 209/416 (50%), Gaps = 43/416 (10%)
Query: 35 EDRSNTLSFPKPKSTPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLET 94
+ R LSF K K ++ +Q ++ ++ + K +++ ++G ++ Y LLE+
Sbjct: 31 KSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLES 90
Query: 95 CYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAF 154
C S +I G +H + +V V +KL+ +YA G + DA +FD M +R+ F
Sbjct: 91 CIDSGSIHLGRILHARFG-LFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL--F 147
Query: 155 PWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHA 214
W+++I Y++ + + L+ M+++GV PD F FP++L+ CA G +E G+ +H
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVV 207
Query: 215 VRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAM 274
++ G + N+++ +Y KCG + A K F RM RD ++WNS+L AY +G EA+
Sbjct: 208 IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAV 267
Query: 275 DTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKH 334
+ +M EG P V+ WN+ LI Y++
Sbjct: 268 ELVKEMEKEGISPGLVT---------------------------WNI-----LIGGYNQL 295
Query: 335 GRLDTARWLFNLMP----ERDVVSWNSIISA--HCKHR-EALALFEQMEEAGVKPDKITF 387
G+ D A L M DV +W ++IS H R +AL +F +M AGV P+ +T
Sbjct: 296 GKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTI 355
Query: 388 VSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
+S +SAC+ L ++N G ++++ + I ++ + +V++Y + G +E A +
Sbjct: 356 MSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS-LVDMYSKCGKLEDARKVF 410
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
Query: 116 LRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS-----QRDASAFPWNSLISGYAQLGLYD 170
LR N+ + ++ Y G +A DLF +M QR+ + WN +I+GY Q G D
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT--WNLIIAGYIQNGKKD 506
Query: 171 DAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALV 230
+A+ L+ +M P+ T +L CA L ++ E+H +R NAL
Sbjct: 507 EALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALT 566
Query: 231 DMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFV 290
D Y K G I +R IF M +D ++WNS++ YV HG A+ F QM +G P+
Sbjct: 567 DTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRG 626
Query: 291 SISTIL 296
++S+I+
Sbjct: 627 TLSSII 632
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 192/335 (57%), Gaps = 16/335 (4%)
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
LK C G L G ++H GF +D L + L+D+Y C + A K+F+ + +RD+
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMV--LEGC-KPDFVSISTILTGVS---SMDLGVQI 308
VSWN + + Y+ + + + F +M ++GC KPD V+ L + ++D G Q+
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 309 HGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH--- 365
H ++ G+ L+++N+L+ YS+ G +D A +F M ER+VVSW ++IS +
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 366 REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM-TEKYKIKPIMEHHG 424
+EA+ F +M + G+ P++ T LLSAC++ GLV +G+ + M + ++KIKP + H+G
Sbjct: 300 KEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYG 359
Query: 425 CMVNLYGRAGMVEKAYSIITDGIGSEAAGP--TQWGALLYSCYLHGSVAIGEIAANKLFD 482
C+V+L GRA +++KAYS+I S P T W LL +C +HG V +GE + L +
Sbjct: 360 CVVDLLGRARLLDKAYSLIK----SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIE 415
Query: 483 LEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDR 517
L+ + ++ LL+ Y G+ E + +R ++ ++
Sbjct: 416 LKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEK 450
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 153/327 (46%), Gaps = 37/327 (11%)
Query: 92 LETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDA 151
L+ C +S + G Q+H I + + + + L+ LY++ DA +FD++ +RD
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQM---VEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
+ WN L S Y + D + L+ +M V+ V+PD T L+ CA LG L+ G+
Sbjct: 180 VS--WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGK 237
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG 268
+VH G N LV MY +CG + KA ++F M R+ VSW ++++ +G
Sbjct: 238 QVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNG 297
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLI 328
EA++ F +M+ G P+ +++ +L+ S H ++ G+ +
Sbjct: 298 FGKEAIEAFNEMLKFGISPEEQTLTGLLSACS--------HSGLVAEGMMF--------- 340
Query: 329 IAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKI 385
R+ + F + P ++ + ++ + R +A +L + ME +KPD
Sbjct: 341 -----FDRMRSGE--FKIKP--NLHHYGCVVDLLGRARLLDKAYSLIKSME---MKPDST 388
Query: 386 TFVSLLSACAYLGLVNDGVRLYALMTE 412
+ +LL AC G V G R+ + + E
Sbjct: 389 IWRTLLGACRVHGDVELGERVISHLIE 415
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 236/465 (50%), Gaps = 23/465 (4%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLL-ETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
+VLK ++ G E A+++ ++C S I G Q H L + V + L
Sbjct: 118 EVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTL 177
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
V +Y+ +A + D + D S F +S +SGY + G + + + + + E
Sbjct: 178 VYMYSLCSGNGEAIRVLDDLPYCDLSVF--SSALSGYLECGAFKEGLDVLRKTANEDFVW 235
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF 246
+ T+ L++ + L L + +VH VR GF + AL++MY KCG ++ A+++F
Sbjct: 236 NNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVF 295
Query: 247 NRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL-- 304
+ H ++ +++ AY EA++ F +M + P+ + + +L ++ + L
Sbjct: 296 DDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLK 355
Query: 305 -GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC 363
G +HG V++ G ++ + N+L+ Y+K G ++ AR F+ M RD+V+WN++IS C
Sbjct: 356 QGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISG-C 414
Query: 364 KH----REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
H REAL F++M G P++ITF+ +L AC+++G V G+ + + +K+ ++P
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474
Query: 420 MEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWG-----ALLYSCYLHGSVAIGE 474
++H+ C+V L +AGM + A + P +W LL +CY+ + +G+
Sbjct: 475 IQHYTCIVGLLSKAGMFKDAEDFMR-------TAPIEWDVVAWRTLLNACYVRRNYRLGK 527
Query: 475 IAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
A + P++ + LL I+ + E + +VR ++ +RG+
Sbjct: 528 KVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 131/262 (50%), Gaps = 11/262 (4%)
Query: 194 VLKVCAGLGLLEVGEEVHRHAV---RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH 250
+LKVCA L +GE +H H + ++ D +N+L+++Y KC V+ARK+F+ M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 251 RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG-CKPDFVSISTILTGVSS---MDLGV 306
R+ VSW +M+ Y + G + E + F M G +P+ + + S+ ++ G
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK-- 364
Q HG ++ G+ + + N+L+ YS A + + +P D+ ++S +S + +
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 365 -HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH 423
+E L + + + +T++S L + L +N +++++ M ++ +E
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMV-RFGFNAEVEAC 275
Query: 424 GCMVNLYGRAGMVEKAYSIITD 445
G ++N+YG+ G V A + D
Sbjct: 276 GALINMYGKCGKVLYAQRVFDD 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVG 121
+ ++ E+ L K + + +A LL + ++ G +H L+ R +V
Sbjct: 315 QDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVM 374
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE 181
V + LV +YA G +EDA F M+ RD WN++ISG + GL +A+ + +M+
Sbjct: 375 VGNALVNMYAKSGSIEDARKAFSGMTFRD--IVTWNTMISGCSHHGLGREALEAFDRMIF 432
Query: 182 EGVEPDLFTFPRVLKVCAGLGLLEVG 207
G P+ TF VL+ C+ +G +E G
Sbjct: 433 TGEIPNRITFIGVLQACSHIGFVEQG 458
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 235/476 (49%), Gaps = 59/476 (12%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS----------FGYMEDA 139
+LL++C ++ +H + L +V V S+L+ L GY A
Sbjct: 17 ALLQSCSSFSDLK---IIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGY---A 70
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+ +F Q+ ++ + F +N LI ++ A Y QM++ + PD TFP ++K +
Sbjct: 71 YGIFSQI--QNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASS 128
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
+ + VGE+ H VR GF ND N+LV MY CG I A +IF +M RD VSW S
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTS 188
Query: 260 MLTAYVHHGLEVE--------------------------------AMDTFCQMVLEGCKP 287
M+ Y G+ VE A+D F M EG
Sbjct: 189 MVAGYCKCGM-VENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 288 D---FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLF 344
+ VS+ + + +++ G + + +V++ + NL + +L+ + + G ++ A +F
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 345 NLMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVN 401
+PE D +SW+SII + H +A+ F QM G P +TF ++LSAC++ GLV
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 402 DGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALL 461
G+ +Y M + + I+P +EH+GC+V++ GRAG + +A + I + + P GALL
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILK-MHVKPNAPI-LGALL 425
Query: 462 YSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDR 517
+C ++ + + E N L ++P++ + LL IY AG+ + +E +R M+ ++
Sbjct: 426 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEK 481
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 199/398 (50%), Gaps = 37/398 (9%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+E +R +S++ C RS A+ G +H + + + + V++ + +Y +
Sbjct: 255 LELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRL 314
Query: 137 EDAHDLFDQMSQRDASAF-----------------------------PWNSLISGYAQLG 167
E A +FDQ +D ++ WN+++ GY
Sbjct: 315 ESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAH 374
Query: 168 LYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLN 227
+D+A+ M +E D T +L VC+G+ +++G++ H R G+ + + N
Sbjct: 375 EWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVAN 434
Query: 228 ALVDMYPKCGHIVKARKIFNRMHR-RDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCK 286
AL+DMY KCG + A F +M RD VSWN++LT G +A+ F M +E K
Sbjct: 435 ALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-K 493
Query: 287 PDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWL 343
P +++T+L G + +++LG IHG++IR G + ++ I +++ YSK D A +
Sbjct: 494 PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEV 553
Query: 344 FNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLV 400
F RD++ WNSII C++ +E LF +E GVKPD +TF+ +L AC G V
Sbjct: 554 FKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHV 613
Query: 401 NDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEK 438
G + ++ M+ KY I P +EH+ CM+ LY + G + +
Sbjct: 614 ELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQ 651
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 210/441 (47%), Gaps = 47/441 (10%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
++V + G+R +A +L++C +R Q+H + NV + + +
Sbjct: 144 DEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSI 203
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
V +Y M DA +FD++ + S WN ++ Y ++G D+A+ ++F+M+E V P
Sbjct: 204 VDVYGKCRVMSDARRVFDEIV--NPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRP 261
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF 246
T V+ C+ LEVG+ +H AV+ D + ++ DMY KC + AR++F
Sbjct: 262 LNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF 321
Query: 247 NR-------------------------------MHRRDSVSWNSMLTAYVHHGLEVEAMD 275
++ M R+ VSWN+ML YVH EA+D
Sbjct: 322 DQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALD 381
Query: 276 TFCQMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYS 332
M E D V++ IL +G+S + +G Q HG++ R G + N+ +AN+L+ Y
Sbjct: 382 FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYG 441
Query: 333 KHGRLDTARWLFNLMPE-RDVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFV 388
K G L +A F M E RD VSWN++++ + +AL+ FE M + KP K T
Sbjct: 442 KCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLA 500
Query: 389 SLLSACAYLGLVNDGVRLYA-LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGI 447
+LL+ CA + +N G ++ L+ + YKI ++ G MV++Y + + A + +
Sbjct: 501 TLLAGCANIPALNLGKAIHGFLIRDGYKIDVVI--RGAMVDMYSKCRCFDYAIEVFKEAA 558
Query: 448 GSEAAGPTQWGALLYSCYLHG 468
+ W +++ C +G
Sbjct: 559 TRDL---ILWNSIIRGCCRNG 576
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 207/448 (46%), Gaps = 53/448 (11%)
Query: 61 TKHQAIEQVLKDIEA-SIEKGIRI---DPE-----IYASLLETCYRSQAIRHGSQVHRLI 111
TK Q+L+ +E ++ K + + PE +Y L +C + +V +
Sbjct: 28 TKLTVTRQILEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHL 87
Query: 112 PTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDD 171
T + + ++ + Y G ++DA +LF++M +RD + WN++I+ AQ G+ D+
Sbjct: 88 VTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGS--WNAVITACAQNGVSDE 145
Query: 172 AIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVD 231
++ +M +GV +F VLK C + L + ++H V+ G+ + ++VD
Sbjct: 146 VFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVD 205
Query: 232 MYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVS 291
+Y KC + AR++F+ + VSWN ++ Y+ G EA+ F +M+ +P +
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHT 265
Query: 292 ISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTAR------- 341
+S+++ S ++++G IH ++ V + ++ S+ Y K RL++AR
Sbjct: 266 VSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR 325
Query: 342 ------W------------------LFNLMPERDVVSWNSIISAHC---KHREALALFEQ 374
W LF+LMPER++VSWN+++ + + EAL
Sbjct: 326 SKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTL 385
Query: 375 MEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK-YKIKPIMEHHGCMVNLYGRA 433
M + D +T V +L+ C+ + V G + + + Y I+ + ++++YG+
Sbjct: 386 MRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVAN--ALLDMYGKC 443
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALL 461
G ++ A SE W ALL
Sbjct: 444 GTLQSANIWFRQ--MSELRDEVSWNALL 469
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 8/271 (2%)
Query: 83 IDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
ID +L C ++ G Q H I NV V + L+ +Y G ++ A+
Sbjct: 393 IDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIW 452
Query: 143 FDQMSQ-RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGL 201
F QMS+ RD + WN+L++G A++G + A++ +F+ ++ +P +T +L CA +
Sbjct: 453 FRQMSELRDEVS--WNALLTGVARVGRSEQALS-FFEGMQVEAKPSKYTLATLLAGCANI 509
Query: 202 GLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSML 261
L +G+ +H +R G+ D + A+VDMY KC A ++F RD + WNS++
Sbjct: 510 PALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSII 569
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQ-IHGWVIRRGV 317
+G E + F + EG KPD V+ IL ++LG Q + +
Sbjct: 570 RGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHI 629
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMP 348
+ + +I Y K+G L LMP
Sbjct: 630 SPQVEHYDCMIELYCKYGCLHQLEEFLLLMP 660
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 228/468 (48%), Gaps = 19/468 (4%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVG 121
K+ IE L + G+ Y+ +L C + + G +H I ++
Sbjct: 277 KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP 336
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE 181
+ + L+ +Y S G M +A +F ++ + + WNS+ISG ++ G + A+ +Y +++
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRI--HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLR 394
Query: 182 EGV-EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
PD +TF + A G+ +H + G+ L+ MY K
Sbjct: 395 MSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAE 454
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
A+K+F+ M RD V W M+ + G A+ F +M E + D S+S+++ S
Sbjct: 455 SAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACS 514
Query: 301 SMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNS 357
M + G H IR G + +S+ +L+ Y K+G+ +TA +F+L D+ WNS
Sbjct: 515 DMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNS 574
Query: 358 IISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKY 414
++ A+ +H +AL+ FEQ+ E G PD +T++SLL+AC++ G G L+ M E+
Sbjct: 575 MLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ- 633
Query: 415 KIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ---WGALLYSCYLHGSVA 471
IK +H+ CMVNL +AG+V++A +I G Q W LL +C ++
Sbjct: 634 GIKAGFKHYSCMVNLVSKAGLVDEALELIEQS----PPGNNQAELWRTLLSACVNTRNLQ 689
Query: 472 IGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
IG AA ++ L+P++ LL +Y GR ED+ +R + RGL
Sbjct: 690 IGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKI--RGL 735
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 210/422 (49%), Gaps = 29/422 (6%)
Query: 58 YPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLR 117
+P T H A E V + + + SL++ C + + GS ++ I +
Sbjct: 184 FPLTTHMAFEYV------------KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYS 231
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
NV V + ++ +Y+S G +E A +FD ++ RDA A WN++I G + +D + +
Sbjct: 232 DNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVA--WNTMIVGSLKNDKIEDGLMFFR 289
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCG 237
M+ GV+P FT+ VL C+ LG +G+ +H + + D NAL+DMY CG
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 238 HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMV-LEGCKPDFVSISTIL 296
+ +A +F R+H + VSWNS+++ +G +AM + +++ + +PD + S +
Sbjct: 350 DMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Query: 297 TGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVV 353
+ + + G +HG V + G E ++ + +L+ Y K+ ++A+ +F++M ERDVV
Sbjct: 410 SATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVV 469
Query: 354 SWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
W +I H + A+ F +M + D + S++ AC+ + ++ G ++ +
Sbjct: 470 LWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCL 528
Query: 411 TEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP--TQWGALLYSCYLHG 468
+ +M G +V++YG+ G E A +I S A+ P W ++L + HG
Sbjct: 529 AIRTGFDCVMSVCGALVDMYGKNGKYETAETIF-----SLASNPDLKCWNSMLGAYSQHG 583
Query: 469 SV 470
V
Sbjct: 584 MV 585
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 167/324 (51%), Gaps = 16/324 (4%)
Query: 86 EIYASLLE---TCYRSQAIRHGSQVHRLIPTV---LLRKNVGVTSKLVRLYASFGYMEDA 139
EI +S++E C ++ Q+H L+ T ++ + L+ +Y G +E A
Sbjct: 92 EIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQA 151
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDD-AIALYFQMVEEGVEPDLFTFPRVLKVC 198
+FD+M R+ ++ N+L S Y++ + A L M E V+P+ TF +++VC
Sbjct: 152 RKVFDKMPHRNVVSY--NALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVC 209
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
A L + +G ++ ++ G+ ++ + +++ MY CG + AR+IF+ ++ RD+V+WN
Sbjct: 210 AVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWN 269
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRR 315
+M+ + + + + F M++ G P + S +L G S S LG IH +I
Sbjct: 270 TMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVS 329
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
+L + N+L+ Y G + A ++F + ++VSWNSIIS ++ +A+ ++
Sbjct: 330 DSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMY 389
Query: 373 EQMEEAGV-KPDKITFVSLLSACA 395
++ +PD+ TF + +SA A
Sbjct: 390 RRLLRMSTPRPDEYTFSAAISATA 413
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 165/342 (48%), Gaps = 29/342 (8%)
Query: 123 TSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
+ L+ +Y +E A +FD+M QR+ S + Y +G +L+ Q+++
Sbjct: 25 NNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMG-----SSLHSQIIKL 79
Query: 183 GVEPDLFTFP---------RVLKVCAGLGLLEVGEEVHRHAVRAGFG---NDGLGLNALV 230
G +F P + + C + +L+ ++H + AG G N L+
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 231 DMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH-GLEVEAMDTFCQMVLEGCKPD- 288
MY +CG + +ARK+F++M R+ VS+N++ +AY + A M E KP+
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 289 --FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
F S+ + + + +G ++ +I+ G N+ + S++ YS G L++AR +F+
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 347 MPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG 403
+ RD V+WN++I K+ + L F M +GV P + T+ +L+ C+ LG + G
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 404 VRLYA--LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
++A ++++ P+ ++++Y G + +A+ +
Sbjct: 320 KLIHARIIVSDSLADLPL---DNALLDMYCSCGDMREAFYVF 358
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 207/386 (53%), Gaps = 22/386 (5%)
Query: 134 GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
G +E +F + Q SA WN+++SGY+ Y++AI+ + QM + ++PD T
Sbjct: 364 GDVETGRRIFSSIPQPSVSA--WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSV 421
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNR-MHRR 252
+L CA L LE G+++H +R + ++ L+ +Y +C + + IF+ ++
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481
Query: 253 DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG--CKPDFVSISTILTGVS---SMDLGVQ 307
D WNSM++ + H+ L+ +A+ F +M C P+ S +T+L+ S S+ G Q
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLC-PNETSFATVLSSCSRLCSLLHGRQ 540
Query: 308 IHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---K 364
HG V++ G + + +L Y K G +D+AR F+ + ++ V WN +I + +
Sbjct: 541 FHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGR 600
Query: 365 HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHG 424
EA+ L+ +M +G KPD ITFVS+L+AC++ GLV G+ + + M + I+P ++H+
Sbjct: 601 GDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYI 660
Query: 425 CMVNLYGRAGMVEKAYSIITDGIGSEA----AGPTQWGALLYSCYLHGSVAIGEIAANKL 480
C+V+ GRAG +E A + +EA + W LL SC +HG V++ A KL
Sbjct: 661 CIVDCLGRAGRLEDAEKL------AEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKL 714
Query: 481 FDLEPDNEHNFALLMKIYENAGRLED 506
L+P + + LL Y + + +D
Sbjct: 715 MRLDPQSSAAYVLLSNTYSSLRQWDD 740
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 177/366 (48%), Gaps = 47/366 (12%)
Query: 89 ASLLETCYRSQAIR-HGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
ASLL CYR + + G +H I + ++ + + ++L+ LY G + A +FD+MS
Sbjct: 10 ASLLR-CYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 148 QRDA---SAF--------------------------PWNSLISGYAQLGLYDDAIALYFQ 178
RD +AF WN++IS + G + A+ +Y +
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
MV +G P FT VL C+ + G H AV+ G + NAL+ MY KCG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 239 IVK-ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
IV ++F + + + VS+ +++ +EA+ F M +G + D V +S IL+
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 298 ------GVSSM------DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN 345
G S+ +LG QIH +R G +L + NSL+ Y+K+ ++ A +F
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 308
Query: 346 LMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
MPE +VVSWN +I + +++ +M ++G +P+++T +S+L AC G V
Sbjct: 309 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 368
Query: 403 GVRLYA 408
G R+++
Sbjct: 369 GRRIFS 374
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 186/382 (48%), Gaps = 15/382 (3%)
Query: 42 SFPKPKSTPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAI 101
S P+P + Y +H E+ + + + ++ D + +L +C R + +
Sbjct: 375 SIPQPSVSAWNAMLSGYSNYEH--YEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFL 432
Query: 102 RHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQ-MSQRDASAFPWNSLI 160
G Q+H ++ + KN + S L+ +Y+ ME + +FD +++ D + WNS+I
Sbjct: 433 EGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIAC--WNSMI 490
Query: 161 SGYAQLGLYDDAIALYFQMVEEGV-EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF 219
SG+ L A+ L+ +M + V P+ +F VL C+ L L G + H V++G+
Sbjct: 491 SGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY 550
Query: 220 GNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQ 279
+D AL DMY KCG I AR+ F+ + R+++V WN M+ Y H+G EA+ + +
Sbjct: 551 VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 610
Query: 280 MVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIR-RGVEWNLSIANSLIIAYSKHG 335
M+ G KPD ++ ++LT S ++ G++I + R G+E L ++ + G
Sbjct: 611 MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAG 670
Query: 336 RLDTARWLFNLMP-ERDVVSWNSIISAHCKHREALALFEQMEEAGVKPD---KITFVSLL 391
RL+ A L P + V W ++S+ C+ ++L ++ E ++ D +V L
Sbjct: 671 RLEDAEKLAEATPYKSSSVLWEILLSS-CRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 729
Query: 392 SACAYLGLVNDGVRLYALMTEK 413
+ + L +D L LM +
Sbjct: 730 NTYSSLRQWDDSAALQGLMNKN 751
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 173/374 (46%), Gaps = 52/374 (13%)
Query: 89 ASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED-AHDLFDQMS 147
AS+L C + G + H + L KN+ V + L+ +YA G++ D +F+ +S
Sbjct: 142 ASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS 201
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV------CAGL 201
Q + + ++I G A+ +A+ ++ M E+GV+ D +L + C L
Sbjct: 202 Q--PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSL 259
Query: 202 GLL---EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
+ E+G+++H A+R GFG D N+L+++Y K + A IF M + VSWN
Sbjct: 260 SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWN 319
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVE 318
M+ + ++++ +M G +P+ V+ ++L
Sbjct: 320 IMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG--------------------- 358
Query: 319 WNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQM 375
A + G ++T R +F+ +P+ V +WN+++S + + EA++ F QM
Sbjct: 359 -----------ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM--TEKYKIKPIMEHHGCMVNLYGRA 433
+ +KPDK T +LS+CA L + G +++ ++ TE K I+ ++ +Y
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSG---LIAVYSEC 464
Query: 434 GMVEKAYSIITDGI 447
+E + I D I
Sbjct: 465 EKMEISECIFDDCI 478
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 35/166 (21%)
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK 364
G IHG+++R G++ + + N L+ Y + G D AR +F+ M RDV SWN+ ++ CK
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 365 ----------------------------------HREALALFEQMEEAGVKPDKITFVSL 390
+AL ++++M G P + T S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 391 LSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
LSAC+ + G+R + + + K I + ++++Y + G +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNA-LLSMYAKCGFI 189
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 201/395 (50%), Gaps = 11/395 (2%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
S +V+ Y+ G + +A LF + D + WN +I GY G +D I L+ M G
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLAL--WNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+P+ +T + LL V VH ++ + ALV+MY +C I A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 244 KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD 303
+FN + D V+ +S++T Y G EA+ F ++ + G KPD V ++ +L + +
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 304 ---LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIIS 360
G ++H +VIR G+E ++ + ++LI YSK G L A LF +PE+++VS+NS+I
Sbjct: 323 DSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLIL 382
Query: 361 AHCKHREALALFEQME---EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIK 417
H A FE+ E G+ PD+ITF +LL C + GL+N G ++ M ++ I+
Sbjct: 383 GLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIE 442
Query: 418 PIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAA 477
P EH+ MV L G AG +E+A+ + +G GALL C +H + + E+ A
Sbjct: 443 PQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGIL--GALLSCCEVHENTHLAEVVA 500
Query: 478 NKLFDLEPDNEHNF-ALLMKIYENAGRLEDMERVR 511
+ + + +L +Y GR +++ER+R
Sbjct: 501 ENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLR 535
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 213/463 (46%), Gaps = 58/463 (12%)
Query: 106 QVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQ 165
++H + L ++ ++L R YA + A LFD +R S F WNS+I YA+
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPER--SVFLWNSIIRAYAK 83
Query: 166 LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE-----VHRHAVRAGFG 220
+ ++L+ Q++ PD FT+ C G E + +H A+ +G G
Sbjct: 84 AHQFTTVLSLFSQILRSDTRPDNFTYA-----CLARGFSESFDTKGLRCIHGIAIVSGLG 138
Query: 221 NDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQM 280
D + +A+V Y K G IV+A K+F + D WN M+ Y G + ++ F M
Sbjct: 139 FDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Query: 281 VLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRL 337
G +P+ ++ + +G+ S + + +H + ++ ++ + + +L+ YS+ +
Sbjct: 199 QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI 258
Query: 338 DTARWLFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSAC 394
+A +FN + E D+V+ +S+I+ + + H+EAL LF ++ +G KPD + +L +C
Sbjct: 259 ASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Query: 395 AYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD--------- 445
A L G +++ + + ++ ++ ++++Y + G+++ A S+
Sbjct: 319 AELSDSVSGKEVHSYVI-RLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 446 -----GIGSEAAGPT------------------QWGALLYSCYLHGSVAIGEIAANKL-- 480
G+G T + ALL +C G + G+ ++
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKS 437
Query: 481 -FDLEPDNEHNFALLMKIYENAGRLEDMERVRMML---VDRGL 519
F +EP EH + ++K+ AG+LE+ M L +D G+
Sbjct: 438 EFGIEPQTEH-YVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGI 479
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
+++H ++ D L Y ++ ARK+F+ R WNS++ AY
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 268 GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS-SMDL-GVQ-IHGWVIRRGVEWNLSIA 324
+ F Q++ +PD + + + G S S D G++ IHG I G+ ++
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 325 NSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH--CKH-REALALFEQMEEAGVK 381
++++ AYSK G + A LF +P+ D+ WN +I + C + + LF M+ G +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 382 PDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH---GC-MVNLYGRAGMVE 437
P+ T V+L S GL++ + L A + +K ++ H GC +VN+Y R +
Sbjct: 205 PNCYTMVALTS-----GLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 438 KAYSIITD 445
A S+
Sbjct: 260 SACSVFNS 267
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 211/411 (51%), Gaps = 15/411 (3%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQ 178
++ V + ++ LY ++ DA DLFDQM QRD + WN++ISGYA +G + + L ++
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVS--WNTMISGYASVGNMSEILKLLYR 235
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
M +G+ PD TF L V + LE+G +H V+ GF D AL+ MY KCG
Sbjct: 236 MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGK 295
Query: 239 IVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG 298
+ ++ + +D V W M++ + G +A+ F +M+ G +I++++
Sbjct: 296 EEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVAS 355
Query: 299 VS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSW 355
+ S DLG +HG+V+R G + NSLI Y+K G LD + +F M ERD+VSW
Sbjct: 356 CAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSW 415
Query: 356 NSIISAHCKHRE---ALALFEQMEEAGVKP-DKITFVSLLSACAYLGLVNDGVRLYALMT 411
N+IIS + ++ + AL LFE+M+ V+ D T VSLL AC+ G + G ++ ++
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVA 471
+ I+P +V++Y + G +E A D I + WG L+ HG
Sbjct: 476 RSF-IRPCSLVDTALVDMYSKCGYLEAAQRCF-DSISWKDV--VSWGILIAGYGFHGKGD 531
Query: 472 IG-EIAANKLFD-LEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
I EI + L +EP++ A+L N + ++ M+ D G++
Sbjct: 532 IALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVE 582
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 229/449 (51%), Gaps = 11/449 (2%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+ ++LK + G+R D + + + L + G +H I ++ + +
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA 285
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
L+ +Y G E ++ + + + +D W +ISG +LG + A+ ++ +M++ G +
Sbjct: 286 LITMYLKCGKEEASYRVLETIPNKDVVC--WTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
V+ CA LG ++G VH + +R G+ D LN+L+ MY KCGH+ K+ I
Sbjct: 344 LSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVI 403
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKP-DFVSISTILTGVSS--- 301
F RM+ RD VSWN++++ Y + +A+ F +M + + D ++ ++L SS
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 302 MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA 361
+ +G IH VIR + + +L+ YSK G L+ A+ F+ + +DVVSW +I+
Sbjct: 464 LPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAG 523
Query: 362 ---HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKP 418
H K AL ++ + +G++P+ + F+++LS+C++ G+V G+++++ M + ++P
Sbjct: 524 YGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEP 583
Query: 419 IMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAAN 478
EH C+V+L RA +E A+ + + G +L +C +G + +I
Sbjct: 584 NHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVL--GIILDACRANGKTEVEDIICE 641
Query: 479 KLFDLEPDNEHNFALLMKIYENAGRLEDM 507
+ +L+P + ++ L + R +D+
Sbjct: 642 DMIELKPGDAGHYVKLGHSFAAMKRWDDV 670
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 200/393 (50%), Gaps = 20/393 (5%)
Query: 61 TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
+ H +QVL + + + D + SLL+ C Q + G +H+ + +
Sbjct: 22 SSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDF 81
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
++S LV LYA FG + A +F++M +RD W ++I Y++ G+ +A +L +M
Sbjct: 82 YISSSLVNLYAKFGLLAHARKVFEEMRERD--VVHWTAMIGCYSRAGIVGEACSLVNEMR 139
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEE--VHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
+G++P T +L G+LE+ + +H AV GF D +N+++++Y KC H
Sbjct: 140 FQGIKPGPVTLLEMLS-----GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDH 194
Query: 239 IVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG 298
+ A+ +F++M +RD VSWN+M++ Y G E + +M +G +PD + L+
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV 254
Query: 299 VSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSW 355
+M ++G +H +++ G + ++ + +LI Y K G+ + + + +P +DVV W
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 356 NSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA-LMT 411
+IS + +AL +F +M ++G S++++CA LG + G ++ ++
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 412 EKYKI-KPIMEHHGCMVNLYGRAGMVEKAYSII 443
Y + P + ++ +Y + G ++K+ I
Sbjct: 375 HGYTLDTPALNS---LITMYAKCGHLDKSLVIF 404
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 4/291 (1%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
+NS I+ + G + ++ + M+ + PD FTFP +LK CA L L G +H+ +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMD 275
GF +D ++LV++Y K G + ARK+F M RD V W +M+ Y G+ EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 276 TFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHG 335
+M +G KP V++ +L+GV + +H + + G + ++++ NS++ Y K
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCD 193
Query: 336 RLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLS 392
+ A+ LF+ M +RD+VSWN++IS + E L L +M G++PD+ TF + LS
Sbjct: 194 HVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Query: 393 ACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
+ + G L+ + K M ++ +Y + G E +Y ++
Sbjct: 254 VSGTMCDLEMGRMLHCQIV-KTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 232/468 (49%), Gaps = 58/468 (12%)
Query: 97 RSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYA-SFGYMEDAHDLFDQMSQRDASAFP 155
+S+ + H QV + L + + KL+R + A +FD+ S FP
Sbjct: 33 KSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFS------FP 86
Query: 156 ----WNSLISGYAQ-LGLYDDAIALYFQ-MVEEGV-EPDLFTFPRVLKVCAGLGLLEVGE 208
+ ++++ Y+ L L+ + +F+ MV V P+ F +P VLK L
Sbjct: 87 NTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTP 146
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMY-PKCGHIVKARKIFNRMHRRDSVSWNSMLTAY--- 264
VH H ++GF + AL+ Y HI AR++F+ M R+ VSW +ML+ Y
Sbjct: 147 LVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARS 206
Query: 265 ----------------------------VHHGLEVEAMDTFCQMVLE-GCKPDFVSISTI 295
+GL +EA+ F +M+ E +P+ V++ +
Sbjct: 207 GDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCV 266
Query: 296 LTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV 352
L+ + ++ L IH + RR + ++ ++NSL+ Y K G L+ A +F + ++ +
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326
Query: 353 VSWNSIISA---HCKHREALALFEQMEEAGV---KPDKITFVSLLSACAYLGLVNDGVRL 406
+WNS+I+ H + EA+A+FE+M + + KPD ITF+ LL+AC + GLV+ G
Sbjct: 327 TAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGY 386
Query: 407 YALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYL 466
+ LMT ++ I+P +EH+GC+++L GRAG ++A +++ A WG+LL +C +
Sbjct: 387 FDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMS--TMKMKADEAIWGSLLNACKI 444
Query: 467 HGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMML 514
HG + + E+A L L P+N A++ +Y G E+ R R M+
Sbjct: 445 HGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMI 492
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E IR + +L C ++ ++ +H L +V V++ LV LY G +E
Sbjct: 253 EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLE 312
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE---EGVEPDLFTFPRV 194
+A +F S++ +A WNS+I+ +A G ++AIA++ +M++ ++PD TF +
Sbjct: 313 EASSVFKMASKKSLTA--WNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 195 LKVCAGLGLLEVGE-----EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM 249
L C GL+ G +R + + G L+D+ + G +A ++ + M
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYG----CLIDLLGRAGRFDEALEVMSTM 426
Query: 250 H-RRDSVSWNSMLTAYVHHG 268
+ D W S+L A HG
Sbjct: 427 KMKADEAIWGSLLNACKIHG 446
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 226/449 (50%), Gaps = 15/449 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME-D 138
G++ + Y+++L C +++ G Q+H V + V + LV +Y E +
Sbjct: 320 GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVE 379
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A +F M + + W +LI G G D L +MV+ VEP++ T VL+ C
Sbjct: 380 ASRVFGAMVSPNVVS--WTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWN 258
+ L + E+H + +R + + N+LVD Y + A + M RRD++++
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYT 497
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRR 315
S++T + G A+ M +G + D +S+ ++ + +++ G +H + ++
Sbjct: 498 SLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKS 557
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALF 372
G S+ NSL+ YSK G L+ A+ +F + DVVSWN ++S + AL+ F
Sbjct: 558 GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAF 617
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
E+M +PD +TF+ LLSAC+ L + G+ + +M + Y I+P +EH+ +V + GR
Sbjct: 618 EEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGR 677
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHN 490
AG +E+A ++ + P + LL +C G++++GE ANK L P +
Sbjct: 678 AGRLEEATGVVE----TMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPAL 733
Query: 491 FALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ LL +Y+ +G+ E ++ R ++ ++ L
Sbjct: 734 YILLADLYDESGKPELAQKTRNLMTEKRL 762
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 200/394 (50%), Gaps = 18/394 (4%)
Query: 89 ASLLETCYR------SQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
+L ++C R S + R G +H + L +N+ + + L+ LY + +A L
Sbjct: 21 GNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKL 80
Query: 143 FDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG 202
FD+MS R + F W +IS + + + A++L+ +M+ G P+ FTF V++ CAGL
Sbjct: 81 FDEMSHR--TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLR 138
Query: 203 LLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
+ G VH ++ GF + + ++L D+Y KCG +A ++F+ + D++SW M++
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEW 319
+ V EA+ + +MV G P+ + +L G SS ++ G IH +I RG+
Sbjct: 199 SLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPL 257
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQME 376
N+ + SL+ YS+ +++ A + N E+DV W S++S ++ +EA+ F +M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
G++P+ T+ ++LS C+ + ++ G ++++ T K + + +V++Y +
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHS-QTIKVGFEDSTDVGNALVDMYMKCSAS 376
Query: 437 EKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSV 470
E S + + S W L+ HG V
Sbjct: 377 EVEASRVFGAMVS--PNVVSWTTLILGLVDHGFV 408
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 189/390 (48%), Gaps = 11/390 (2%)
Query: 61 TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
TK Q L E + G + ++S++ +C + I +G +VH + N
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
V S L LY+ G ++A +LF + ++A W +IS + +A+ Y +MV
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSL--QNADTISWTMMISSLVGARKWREALQFYSEMV 217
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
+ GV P+ FTF ++L + LG LE G+ +H + + G + + +LVD Y + +
Sbjct: 218 KAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKME 276
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---T 297
A ++ N +D W S+++ +V + EA+ TF +M G +P+ + S IL +
Sbjct: 277 DAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Query: 298 GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDT-ARWLFNLMPERDVVSWN 356
V S+D G QIH I+ G E + + N+L+ Y K + A +F M +VVSW
Sbjct: 337 AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 357 SIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
++I H ++ L +M + V+P+ +T +L AC+ L V + ++A + +
Sbjct: 397 TLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRR 456
Query: 414 YKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
+ + M +V+ Y + V+ A+++I
Sbjct: 457 H-VDGEMVVGNSLVDAYASSRKVDYAWNVI 485
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 206/413 (49%), Gaps = 51/413 (12%)
Query: 115 LLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIA 174
++ KNV + + ++ Y + A FD +RD WN++ISGY ++G +A +
Sbjct: 54 MVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDI--VLWNTMISGYIEMGNMLEARS 111
Query: 175 LYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYP 234
L+ QM P C D + N +++ Y
Sbjct: 112 LFDQM------------P-----C----------------------RDVMSWNTVLEGYA 132
Query: 235 KCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG-CKPDFVSIS 293
G + ++F+ M R+ SWN ++ Y +G E + +F +MV EG P+ +++
Sbjct: 133 NIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMT 192
Query: 294 TILTGVSSM---DLGVQIHGWVIRRGV-EWNLSIANSLIIAYSKHGRLDTARWLFNLMPE 349
+L+ + + D G +H + G + ++++ N+LI Y K G ++ A +F +
Sbjct: 193 LVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR 252
Query: 350 RDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
RD++SWN++I +AH EAL LF +M+ +G+ PDK+TFV +L AC ++GLV DG+
Sbjct: 253 RDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAY 312
Query: 407 YALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYL 466
+ M + I P +EH GC+V+L RAG + +A I A W LL + +
Sbjct: 313 FNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINK--MPVKADAVIWATLLGASKV 370
Query: 467 HGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+ V IGE+A +L LEP N NF +L IY +AGR +D R+++ + D G
Sbjct: 371 YKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGF 423
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 233/476 (48%), Gaps = 53/476 (11%)
Query: 89 ASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQ 148
AS+L C I G Q+H L V V + LV +Y+ G A +F+++
Sbjct: 136 ASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPH 192
Query: 149 RDASAFPWNSLISGYAQLGLYDDAIALYFQMVE-EGVEPDLFTFPRVLKVCAGLGLLEVG 207
+ S +N+ ISG + G+ + +++ M + EP+ TF + CA L L+ G
Sbjct: 193 K--SVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYG 250
Query: 208 EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH-RRDSVSWNSMLTAYVH 266
++H ++ F + + AL+DMY KC A +F + R+ +SWNS+++ +
Sbjct: 251 RQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMI 310
Query: 267 HGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS-------------------------- 300
+G A++ F ++ EG KPD + +++++G S
Sbjct: 311 NGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKC 370
Query: 301 ------------SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN-LM 347
++ G +IHG VI+ E ++ + SLI Y K G AR +F+
Sbjct: 371 LTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFE 430
Query: 348 PE-RDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG 403
P+ +D V WN +IS + KH E A+ +FE + E V+P TF ++LSAC++ G V G
Sbjct: 431 PKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKG 490
Query: 404 VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYS 463
+++ LM E+Y KP EH GCM++L GR+G + +A +I + + +LL S
Sbjct: 491 SQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQ---MSEPSSSVYSSLLGS 547
Query: 464 CYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
C H +GE AA KL +LEP+N F +L IY R ED+E +R ++ + L
Sbjct: 548 CRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQL 603
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 168/345 (48%), Gaps = 25/345 (7%)
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
P+ FTFP +LK CA LG + G +H V+ GF D ALV MY K + A K+
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLG 305
+ M R S N+ ++ + +G +A F + G + V+++++L G ++ G
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 306 VQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH 365
+Q+H ++ G E + + SL+ YS+ G A +F +P + VV++N+ IS ++
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 366 ---REALALFEQMEE-AGVKPDKITFVSLLSACAYLGLVNDGVRLYAL-MTEKYKIKPIM 420
++F M + + +P+ +TFV+ ++ACA L + G +L+ L M ++++ + ++
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 421 EHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKL 480
++++Y + + AY + T+ + W +++ ++G A +L
Sbjct: 269 --GTALIDMYSKCRCWKSAYIVFTE--LKDTRNLISWNSVISGMMINGQ----HETAVEL 320
Query: 481 FD------LEPDNE------HNFALLMKIYENAGRLEDMERVRMM 513
F+ L+PD+ F+ L K+ E E M V M+
Sbjct: 321 FEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV 365
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 229/481 (47%), Gaps = 47/481 (9%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E G+ +D + +L+ C R ++ G Q+H + L ++ + + L+ LY G +
Sbjct: 114 ENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLG 173
Query: 138 DAHDLFDQMSQRDASAF-------------------------------PWNSLISGYAQL 166
+ +FD+M +RD+ ++ WNS+ISGYAQ
Sbjct: 174 LSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT 233
Query: 167 GLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGL 226
D + + ++ + E DL ++ ++ G +E + + R D +
Sbjct: 234 S---DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPR----RDVVTW 286
Query: 227 NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG-C 285
++D Y K G + A+ +F++M RD V++NSM+ YV + +EA++ F M E
Sbjct: 287 ATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHL 346
Query: 286 KPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW 342
PD ++ +L ++ + + +H +++ + + +LI YSK G + A
Sbjct: 347 LPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAML 406
Query: 343 LFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGL 399
+F + + + WN++I H A + Q+E +KPD ITFV +L+AC++ GL
Sbjct: 407 VFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGL 466
Query: 400 VNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGA 459
V +G+ + LM K+KI+P ++H+GCMV++ R+G +E A ++I + W
Sbjct: 467 VKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEE--MPVEPNDVIWRT 524
Query: 460 LLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
L +C H GE+ A L N ++ LL +Y + G +D+ RVR M+ +R +
Sbjct: 525 FLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKI 584
Query: 520 D 520
+
Sbjct: 585 E 585
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 219/439 (49%), Gaps = 58/439 (13%)
Query: 91 LLETCYRSQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFG--YMED-AHDLFDQM 146
+L +C S + +Q+H RLI T ++ KN +T+++V +AS Y+ D A +F +
Sbjct: 18 VLGSCKTSDDV---NQIHGRLIKTGII-KNSNLTTRIVLAFASSRRPYLADFARCVFHEY 73
Query: 147 SQRDAS------AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAG 200
S F WN++I ++ A+ L M+E GV D F+ VLK C+
Sbjct: 74 HVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSR 133
Query: 201 LGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSM 260
LG ++ G ++H + G +D N L+ +Y KCG + +R++F+RM +RDSVS+NSM
Sbjct: 134 LGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSM 193
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWN 320
+ YV GL V A + F M +E + +S +++++G + GV I + E +
Sbjct: 194 IDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKD 251
Query: 321 LSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---------------- 364
L NS+I Y KHGR++ A+ LF++MP RDVV+W ++I + K
Sbjct: 252 LISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPH 311
Query: 365 ------------------HREALALFEQME-EAGVKPDKITFVSLLSACAYLGLVNDGVR 405
H EAL +F ME E+ + PD T V +L A A LG ++ +
Sbjct: 312 RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID 371
Query: 406 LYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCY 465
++ + EK + + ++++Y + G ++ A ++ +GI E W A++
Sbjct: 372 MHLYIVEK-QFYLGGKLGVALIDMYSKCGSIQHAM-LVFEGI--ENKSIDHWNAMIGGLA 427
Query: 466 LHGSVAIGEIAANKLFDLE 484
+HG +GE A + L +E
Sbjct: 428 IHG---LGESAFDMLLQIE 443
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 234/482 (48%), Gaps = 50/482 (10%)
Query: 77 IEKG-IRIDPEIYASLLETCYRSQAIRHGSQVHR-LIPTVLLRKNVGVTSKLVRLYASFG 134
+ KG + D S+L C + + G ++H ++ L ++ V + L+ YA FG
Sbjct: 321 VHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFG 380
Query: 135 YMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRV 194
A+ F MS +D WN+++ +A + L ++ E + D T +
Sbjct: 381 DTSAAYWAFSLMSTKDI--ISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSL 438
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGND----GLGLNALVDMYPKCGHIVKARKIFNRM- 249
LK C + + +EVH ++V+AG +D LG NAL+D Y KCG++ A KIF +
Sbjct: 439 LKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLG-NALLDAYAKCGNVEYAHKIFLGLS 497
Query: 250 HRRDSVSWNSMLTAYVHHG-------------------------------LEVEAMDTFC 278
RR VS+NS+L+ YV+ G EA+ F
Sbjct: 498 ERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFR 557
Query: 279 QMVLEGCKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHG 335
++ G +P+ V+I +L ++S+ L Q HG++IR G+ ++ + +L+ Y+K G
Sbjct: 558 EIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCG 616
Query: 336 RLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLS 392
L A +F RD+V + ++++ + H +EAL ++ M E+ +KPD + ++L+
Sbjct: 617 SLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLT 676
Query: 393 ACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAA 452
AC + GL+ DG+++Y + + +KP ME + C V+L R G ++ AYS +T A
Sbjct: 677 ACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNA 736
Query: 453 GPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRM 512
WG LL +C + + +G AN L E D+ N L+ +Y + E + +R
Sbjct: 737 NI--WGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRN 794
Query: 513 ML 514
++
Sbjct: 795 LM 796
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 184/374 (49%), Gaps = 16/374 (4%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G D ++ +++ C + G +H + + V+ ++ +YA M+D
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM-VEEGVEPDLFTFPRVLKVC 198
+F QM D WN +++G + + + + + M + +P TF VL +C
Sbjct: 76 QKMFRQMDSLDPVV--WNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV-KARKIFNRMHRRDSVSW 257
LG G+ +H + ++AG D L NALV MY K G I A F+ + +D VSW
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSW 192
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL------GVQIHGW 311
N+++ + + + +A +FC M+ E +P++ +I+ +L +SMD G QIH +
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSY 252
Query: 312 VIRRG-VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHRE 367
V++R ++ ++ + NSL+ Y + GR++ A LF M +D+VSWN +I +++C+ +
Sbjct: 253 VVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFK 312
Query: 368 ALALFEQMEEAG-VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCM 426
A LF + G V PD +T +S+L CA L + G +++ + + +
Sbjct: 313 AFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNAL 372
Query: 427 VNLYGRAGMVEKAY 440
++ Y R G AY
Sbjct: 373 ISFYARFGDTSAAY 386
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 184/376 (48%), Gaps = 27/376 (7%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM-EDAHDLFDQM 146
+A +L C R +G +H I L K+ V + LV +YA FG++ DA+ FD +
Sbjct: 125 FAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI 184
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLG---L 203
+ +D + WN++I+G+++ + DA + M++E EP+ T VL VCA +
Sbjct: 185 ADKDVVS--WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIA 242
Query: 204 LEVGEEVHRHAV-RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
G ++H + V R+ N+LV Y + G I +A +F RM +D VSWN ++
Sbjct: 243 CRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIA 302
Query: 263 AYVHHGLEVEAMDTFCQMVLEG-CKPDFVSISTIL---TGVSSMDLGVQIHGWVIRRG-V 317
Y + +A F +V +G PD V+I +IL ++ + G +IH +++R +
Sbjct: 303 GYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYL 362
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQ 374
+ S+ N+LI Y++ G A W F+LM +D++SWN+I+ A K + L L
Sbjct: 363 LEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHH 422
Query: 375 MEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH-------GCMV 427
+ + D +T +SLL C + + ++ Y +K + H ++
Sbjct: 423 LLNEAITLDSVTILSLLKFCINVQGIGKVKEVHG-----YSVKAGLLHDEEEPKLGNALL 477
Query: 428 NLYGRAGMVEKAYSII 443
+ Y + G VE A+ I
Sbjct: 478 DAYAKCGNVEYAHKIF 493
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 147/306 (48%), Gaps = 14/306 (4%)
Query: 64 QAIEQVLKDIEASIEKGIRID---PEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
Q I +V + S++ G+ D P++ +LL+ + + + H++ + R+ +
Sbjct: 446 QGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYA---HKIFLGLSERRTL 502
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
+ L+ Y + G +DA LF +MS D + W+ ++ YA+ ++AI ++ ++
Sbjct: 503 VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTT--WSLMVRIYAESCCPNEAIGVFREIQ 560
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
G+ P+ T +L VCA L L + + H + +R G G+ L L+D+Y KCG +
Sbjct: 561 ARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLK-GTLLDVYAKCGSLK 619
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
A +F RRD V + +M+ Y HG EA+ + M KPD V I+T+LT
Sbjct: 620 HAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACC 679
Query: 301 SMDL---GVQIHGWV-IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDVVSW 355
L G+QI+ + G++ + + ++ GRLD A MP E + W
Sbjct: 680 HAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIW 739
Query: 356 NSIISA 361
+++ A
Sbjct: 740 GTLLRA 745
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 207/409 (50%), Gaps = 49/409 (11%)
Query: 155 PWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHA 214
WN+LI+GYAQ G ++A+ + M E G++ D +F VL V + L L++G+EVH
Sbjct: 227 SWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARV 286
Query: 215 VRAGFGNDGLGLNALVDMYPKCGHI-------------------------------VKAR 243
++ G ++ + +VD+Y KCG++ V+A+
Sbjct: 287 LKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAK 346
Query: 244 KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVL-----EGCKPDFVSISTILTG 298
++F+ + ++ V W +M Y L + D+ ++ E PD + + ++L
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGY----LNLRQPDSVLELARAFIANETNTPDSLVMVSVLGA 402
Query: 299 VS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSW 355
S M+ G +IHG +R G+ + + + + YSK G ++ A +F+ ERD V +
Sbjct: 403 CSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMY 462
Query: 356 NSIISAHCKHR----EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
N++I A C H ++ FE M E G KPD+ITF++LLSAC + GLV +G + + M
Sbjct: 463 NAMI-AGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMI 521
Query: 412 EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVA 471
E Y I P H+ CM++LYG+A ++KA ++ +GI GA L +C + +
Sbjct: 522 EAYNISPETGHYTCMIDLYGKAYRLDKAIELM-EGIDQVEKDAVILGAFLNACSWNKNTE 580
Query: 472 IGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
+ + KL +E N + + Y ++GR ++M+R+R + + L+
Sbjct: 581 LVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELE 629
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 188/442 (42%), Gaps = 87/442 (19%)
Query: 109 RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS-QRDASAFPWNSLISGYAQL- 166
R + +L +NV + ++ Y F +++A +LF+ + +RD +N+L+SG+A+
Sbjct: 43 RNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDL--ITYNTLLSGFAKTD 100
Query: 167 GLYDDAIALYFQM---VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDG 223
G +AI ++ +M ++ + D FT ++K+ A L + GE++H V+ G
Sbjct: 101 GCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTK 160
Query: 224 LGLNALVDMYPKCGHIVKARKIFN----------------------------------RM 249
+++L+ MY KCG + IFN
Sbjct: 161 FAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNP 220
Query: 250 HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGV 306
D++SWN+++ Y +G E EA+ M G K D F ++ +L+ + S+ +G
Sbjct: 221 ELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGK 280
Query: 307 QIHGWVIRRGVE-------------------------------WNLSIANSLIIAYSKHG 335
++H V++ G NL A+S+I+ YS G
Sbjct: 281 EVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQG 340
Query: 336 RLDTARWLFNLMPERDVVSWNSIISAHCKHREALALFEQ----MEEAGVKPDKITFVSLL 391
++ A+ LF+ + E+++V W ++ + R+ ++ E + PD + VS+L
Sbjct: 341 KMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVL 400
Query: 392 SACAYLGLVNDGVRL--YALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGS 449
AC+ + G + ++L T K ++ V++Y + G VE A I
Sbjct: 401 GACSLQAYMEPGKEIHGHSLRTGILMDKKLVT---AFVDMYSKCGNVEYAERIFDSSFER 457
Query: 450 EAAGPTQWGALLYSCYLHGSVA 471
+ + A++ C HG A
Sbjct: 458 D---TVMYNAMIAGCAHHGHEA 476
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 154/358 (43%), Gaps = 43/358 (12%)
Query: 58 YPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLR 117
Y Q ++ E+ LK + E G++ D + ++L ++++ G +VH +
Sbjct: 235 YAQNGYE--EEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSY 292
Query: 118 KNVGVTSKLVRLYASFG---YMEDAH----------------------------DLFDQM 146
N V+S +V +Y G Y E AH LFD +
Sbjct: 293 SNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSL 352
Query: 147 SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV-EEGVEPDLFTFPRVLKVCAGLGLLE 205
S+++ W ++ GY L D + L + E PD VL C+ +E
Sbjct: 353 SEKNL--VVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYME 410
Query: 206 VGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYV 265
G+E+H H++R G D + A VDMY KCG++ A +IF+ RD+V +N+M+
Sbjct: 411 PGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCA 470
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIAN 325
HHG E ++ F M G KPD ++ +L+ L ++ + +N+S
Sbjct: 471 HHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPET 530
Query: 326 S----LIIAYSKHGRLDTARWLFNLMP--ERDVVSWNSIISAHCKHREALALFEQMEE 377
+I Y K RLD A L + E+D V + ++A C + L +++EE
Sbjct: 531 GHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNA-CSWNKNTELVKEVEE 587
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 83/310 (26%)
Query: 211 HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
H ++++G + N LV++Y K G + +AR +F+ M R+ SWN+++ AYV
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD--------------------------- 303
EA + F + C+ D ++ +T+L+G + D
Sbjct: 71 KEARELFES---DNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFT 127
Query: 304 ---------------LGVQIHGWVIRRG-------------------------------- 316
G Q+HG +++ G
Sbjct: 128 VTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSC 187
Query: 317 VEWNLSIA-NSLIIAYSKHGRLDTARWLFNLMPE-RDVVSWNSIISAHCKH---REALAL 371
VE+ S+A N++I AY + G +D A +F PE D +SWN++I+ + ++ EAL +
Sbjct: 188 VEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 372 FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYG 431
MEE G+K D+ +F ++L+ + L + G ++A + + G +V++Y
Sbjct: 248 AVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG-IVDVYC 306
Query: 432 RAGMVEKAYS 441
+ G ++ A S
Sbjct: 307 KCGNMKYAES 316
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 228/454 (50%), Gaps = 28/454 (6%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED----AHDLF 143
+ SL+ R ++ H L L +N SKL+ + + A +F
Sbjct: 11 WKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIF 70
Query: 144 DQMSQRDASAFPWNSLI-----SGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
D S ++F ++++I S LGL L + EE + P TF ++ C
Sbjct: 71 D--SIEIPNSFVYDTMIRICSRSSQPHLGL--RYFLLMVKEEEEDIAPSYLTFHFLIVAC 126
Query: 199 AGLGLLEVGEEVHRHAVRAG-FGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
VG+++H V+ G F +D ++ +Y + ++ ARK+F+ + + D V W
Sbjct: 127 LKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKW 186
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIR 314
+ ++ YV GL E ++ F +M+++G +PD S++T LT V ++ G IH +V +
Sbjct: 187 DVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKK 246
Query: 315 RG-VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALA 370
+ +E ++ + +L+ Y+K G ++TA +F + R+V SW ++I + + ++A+
Sbjct: 247 KSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMT 306
Query: 371 LFEQME-EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
E++E E G+KPD + + +L+ACA+ G + +G + M +Y+I P EH+ C+V+L
Sbjct: 307 CLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDL 366
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDN-- 487
RAG ++ A ++I A + WGALL C H +V +GE+A L DLE N
Sbjct: 367 MCRAGRLDDALNLIEKMPMKPLA--SVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVE 424
Query: 488 --EHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
E L IY + R + +VR M+ RG+
Sbjct: 425 EEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGV 458
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 196/372 (52%), Gaps = 15/372 (4%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV----GVTSKLVRLYASF 133
E+ I + I ++L +A++ G +VH VL KN V S L+ LY
Sbjct: 309 EEKIYPNSVILTTILPVLGDVKALKLGKEVH---AHVLKSKNYVEQPFVHSGLIDLYCKC 365
Query: 134 GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
G M +F QR+A W +L+SGYA G +D A+ M +EG PD+ T
Sbjct: 366 GDMASGRRVFYGSKQRNA--ISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIAT 423
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
VL VCA L ++ G+E+H +A++ F + + +L+ MY KCG ++F+R+ +R+
Sbjct: 424 VLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRN 483
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHG 310
+W +M+ YV + ++ F M+L +PD V++ +LT S ++ LG ++HG
Sbjct: 484 VKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHG 543
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH-CKH--RE 367
++++ E ++ +I Y K G L +A + F+ + + ++W +II A+ C R+
Sbjct: 544 HILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRD 603
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
A+ FEQM G P+ TF ++LS C+ G V++ R + LM Y ++P EH+ ++
Sbjct: 604 AINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVI 663
Query: 428 NLYGRAGMVEKA 439
L R G VE+A
Sbjct: 664 ELLNRCGRVEEA 675
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 209/409 (51%), Gaps = 19/409 (4%)
Query: 42 SFPKPKSTPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAI 101
S P P +IH+ + +E L ++ ++GI ++ +++LLE C R +++
Sbjct: 68 SLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSL 127
Query: 102 RHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLIS 161
HG QVH I L N + +KLV +Y + G ++DA +FD+ + ++ + WN+L+
Sbjct: 128 LHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDEST--SSNVYSWNALLR 185
Query: 162 GYAQLG--LYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF 219
G G Y D ++ + +M E GV+ ++++ V K AG L G + H A++ G
Sbjct: 186 GTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGL 245
Query: 220 GNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQ 279
N +LVDMY KCG + AR++F+ + RD V W +M+ H+ + EA+ F
Sbjct: 246 FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRT 305
Query: 280 MVL-EGCKPDFVSISTILT---GVSSMDLGVQIHGWVIRRG--VEWNLSIANSLIIAYSK 333
M+ E P+ V ++TIL V ++ LG ++H V++ VE + + LI Y K
Sbjct: 306 MISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF-VHSGLIDLYCK 364
Query: 334 HGRLDTARWLFNLMPERDVVSWNSIIS---AHCKHREALALFEQMEEAGVKPDKITFVSL 390
G + + R +F +R+ +SW +++S A+ + +AL M++ G +PD +T ++
Sbjct: 365 CGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATV 424
Query: 391 LSACAYLGLVNDG--VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVE 437
L CA L + G + YAL K P + ++ +Y + G+ E
Sbjct: 425 LPVCAELRAIKQGKEIHCYAL---KNLFLPNVSLVTSLMVMYSKCGVPE 470
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 2/232 (0%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+Q L+ I ++G R D A++L C +AI+ G ++H L NV + +
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTS 458
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
L+ +Y+ G E LFD++ QR+ A W ++I Y + I ++ M+
Sbjct: 459 LMVMYSKCGVPEYPIRLFDRLEQRNVKA--WTAMIDCYVENCDLRAGIEVFRLMLLSKHR 516
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
PD T RVL VC+ L L++G+E+H H ++ F + ++ MY KCG + A
Sbjct: 517 PDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFS 576
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
F+ + + S++W +++ AY + L +A++ F QMV G P+ + + +L+
Sbjct: 577 FDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLS 628
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 213/462 (46%), Gaps = 46/462 (9%)
Query: 98 SQAIRHGSQVH-RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPW 156
S +I H QVH RLI + N +S +RL S D+ + + +
Sbjct: 32 SNSITHLFQVHARLITS----GNFWDSSWAIRLLKSSSRFGDSSYTV-SIYRSIGKLYCA 86
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVR 216
N + Y A+ YF ++ G PD +TF ++ ++ G+ H A++
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 217 AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEA--- 273
G N+L+ MY CG + A+K+F + +RD VSWNS++ V +G + A
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 274 ----------------------------MDTFCQMVLEGCKPDFVSISTILTGV---SSM 302
+ F +MV G + + ++ +L + +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 303 DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH 362
G +H +IR + ++ I +LI Y K + AR +F+ + R+ V+WN +I AH
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 363 CKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
C H L LFE M ++PD++TFV +L CA GLV+ G Y+LM ++++IKP
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 420 MEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP--TQWGALLYSCYLHGSVAIGEIAA 477
H CM NLY AG E+A + + + E P T+W LL S G+ +GE A
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKN-LPDEDVTPESTKWANLLSSSRFTGNPTLGESIA 445
Query: 478 NKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
L + +P N + LLM IY GR ED+ RVR M+ +R +
Sbjct: 446 KSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKI 487
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 15/196 (7%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+ G + + LL C RS ++ G VH + L +V + + L+ +Y +
Sbjct: 242 VRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEV 301
Query: 137 EDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A +FD +S R+ WN +I + G + + L+ M+ + PD TF VL
Sbjct: 302 GLARRIFDSLSIRN--KVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLC 359
Query: 197 VCAGLGLLEVGEE-----VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR 251
CA GL+ G+ V ++ FG+ + ++Y G +A + +
Sbjct: 360 GCARAGLVSQGQSYYSLMVDEFQIKPNFGHQW----CMANLYSSAGFPEEAEEALKNLPD 415
Query: 252 RD----SVSWNSMLTA 263
D S W ++L++
Sbjct: 416 EDVTPESTKWANLLSS 431
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 228/440 (51%), Gaps = 45/440 (10%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQ-------LGLYDD 171
+V V S L+ +Y G + A +FD+M +R+ + WN++I GY GL+++
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVAT--WNAMIGGYMSNGDAVLASGLFEE 137
Query: 172 ------------AIALYFQMVEEGVEPDLFT-FPRVLKVCAGLGLLEVGEEVHRHAVRAG 218
I Y + +E +LF P LK ++ +G V+ +
Sbjct: 138 ISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVM-LGVYVNNRKMEDA 196
Query: 219 --FGNDGLGLNALV-----DMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEV 271
F D NA V Y + G + +AR IF R+ RD V WN+++ Y +G
Sbjct: 197 RKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSD 256
Query: 272 EAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLI 328
+A+D F M EG +PD V++S+IL+ + +D+G ++H + RG+E N ++N+LI
Sbjct: 257 DAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALI 316
Query: 329 IAYSKHGRLDTARWLFNLMPERDVVSWNSIISA---HCKHREALALFEQMEEAGVKPDKI 385
Y+K G L+ A +F + R V NS+IS H K +EAL +F ME +KPD+I
Sbjct: 317 DMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEI 376
Query: 386 TFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
TF+++L+AC + G + +G+++++ M + +KP ++H GC+++L GR+G +++AY ++ +
Sbjct: 377 TFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKE 435
Query: 446 GIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPD-----NEHNFALLMKIYEN 500
T GALL +C +H + E K+ + +E++ A + +Y +
Sbjct: 436 --MHVKPNDTVLGALLGACKVHMDTEMAE-QVMKIIETAGSITNSYSENHLASISNLYAH 492
Query: 501 AGRLEDMERVRMMLVDRGLD 520
R + E +R+ + RGL+
Sbjct: 493 TERWQTAEALRVEMEKRGLE 512
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 137/313 (43%), Gaps = 40/313 (12%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
KN V S ++ Y G + +A +F ++ RD WN+LI+GYAQ G DDAI +F
Sbjct: 206 KNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL--VIWNTLIAGYAQNGYSDDAIDAFF 263
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCG 237
M EG EPD T +L CA G L+VG EVH G + NAL+DMY KCG
Sbjct: 264 NMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCG 323
Query: 238 HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
+ A +F + R NSM++ HG EA++ F M KPD ++ +LT
Sbjct: 324 DLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLT 383
Query: 298 GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNS 357
+HG + G++ + + KH F +
Sbjct: 384 AC--------VHGGFLMEGLKIFSEMKTQDVKPNVKH---------FGCLIH-------- 418
Query: 358 IISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIK 417
++ K +EA L ++M VKP+ +LL AC V + M E ++
Sbjct: 419 LLGRSGKLKEAYRLVKEMH---VKPNDTVLGALLGACK--------VHMDTEMAE--QVM 465
Query: 418 PIMEHHGCMVNLY 430
I+E G + N Y
Sbjct: 466 KIIETAGSITNSY 478
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 172/376 (45%), Gaps = 40/376 (10%)
Query: 154 FPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGL-GLLEVGEEVHR 212
F ++LI + G A+ LY + GV + P +L+ CA + + +G+ +H
Sbjct: 12 FHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHS 70
Query: 213 HAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVE 272
+++ G +D + ++L+ MY KCG +V ARK+F+ M R+ +WN+M+ Y+ +G V
Sbjct: 71 ESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVL 130
Query: 273 AMDTFCQMVLEGCKPDFVSISTILTGVSSMDLG-------------VQIHGWVIRRGV-- 317
A F ++ + C+ I I +++ + W + GV
Sbjct: 131 ASGLFEEISV--CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYV 188
Query: 318 ----------------EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISA 361
E N + + ++ Y + G + AR +F + RD+V WN++I+
Sbjct: 189 NNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAG 248
Query: 362 HCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKP 418
+ ++ +A+ F M+ G +PD +T S+LSACA G ++ G +++L+ + I+
Sbjct: 249 YAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHR-GIEL 307
Query: 419 IMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAAN 478
++++Y + G +E A S+ + I + + + G A+ +
Sbjct: 308 NQFVSNALIDMYAKCGDLENATSVF-ESISVRSVACCNSMISCLAIHGKGKEALEMFSTM 366
Query: 479 KLFDLEPDNEHNFALL 494
+ DL+PD A+L
Sbjct: 367 ESLDLKPDEITFIAVL 382
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 2/172 (1%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+G D +S+L C +S + G +VH LI + N V++ L+ +YA G +E+
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A +F+ +S R + NS+IS A G +A+ ++ M ++PD TF VL C
Sbjct: 328 ATSVFESISVRSVAC--CNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 385
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH 250
G L G ++ + L+ + + G + +A ++ MH
Sbjct: 386 VHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 437
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 221/443 (49%), Gaps = 28/443 (6%)
Query: 97 RSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPW 156
+ +++++ Q+H I T+ L + SKL+ L ++ + A + Q+ + S F +
Sbjct: 18 KCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIP--NPSVFLY 74
Query: 157 NSLISGY------AQLGLYDDAIALYFQMVEEG---VEPDLFTFPRVLKVCAGLGLL--E 205
N+LIS Q L A +LY Q++ V P+ FT+P + K +G
Sbjct: 75 NTLISSIVSNHNSTQTHL---AFSLYDQILSSRSNFVRPNEFTYPSLFKA-SGFDAQWHR 130
Query: 206 VGEEVHRHAVR--AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTA 263
G +H H ++ +D ALV Y CG + +AR +F R+ D +WN++L A
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 264 YVHH---GLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWN 320
Y + + E + F +M + + V++ + GV H +V++ + N
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLN 250
Query: 321 LSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEE 377
+ SLI YSK G L AR +F+ M +RDV +N++I H +E + L++ +
Sbjct: 251 QFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLIS 310
Query: 378 AGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVE 437
G+ PD TFV +SAC++ GLV++G++++ M Y I+P +EH+GC+V+L GR+G +E
Sbjct: 311 QGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLE 370
Query: 438 KAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKI 497
+A I A T W + L S HG GEIA L LE +N N+ LL I
Sbjct: 371 EAEECIKKMPVKPNA--TLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Query: 498 YENAGRLEDMERVRMMLVDRGLD 520
Y R D+E+ R ++ D ++
Sbjct: 429 YAGVNRWTDVEKTRELMKDHRVN 451
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 81 IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
+R + +L+++C G H + L N V + L+ LY+ G + A
Sbjct: 212 VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFAR 271
Query: 141 DLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAG 200
+FD+MSQRD S + N++I G A G + I LY ++ +G+ PD TF + C+
Sbjct: 272 KVFDEMSQRDVSCY--NAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSH 329
Query: 201 LGLLEVGEEVHRHAVRAGFGNDGL--GLNALVDMYPKCGHIVKARKIFNRMHRRDSVS-W 257
GL++ G ++ ++++A +G + LVD+ + G + +A + +M + + + W
Sbjct: 330 SGLVDEGLQIF-NSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLW 388
Query: 258 NSMLTAYVHHG 268
S L + HG
Sbjct: 389 RSFLGSSQTHG 399
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 223/441 (50%), Gaps = 26/441 (5%)
Query: 84 DPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
D + +L ++C S + G Q+H I ++ V++ +V +YA FG M A + F
Sbjct: 77 DNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAF 136
Query: 144 DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGL 203
D+M R S W +LISGY + G D A L+ QM D+ + ++ G
Sbjct: 137 DEMPHR--SEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMD-----GF 186
Query: 204 LEVGEEVH-RHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
++ G+ R + ++ Y I ARK+F+ M R+ VSWN+M+
Sbjct: 187 VKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIG 246
Query: 263 AYVHHGLEVEAMDTFCQM-VLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVE 318
Y + E + F +M PD V+I ++L +S ++ LG H +V R+ ++
Sbjct: 247 GYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLD 306
Query: 319 WNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQM 375
+ + +++ YSK G ++ A+ +F+ MPE+ V SWN++I + R AL LF M
Sbjct: 307 KKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366
Query: 376 --EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
EE KPD+IT +++++AC + GLV +G + + +M E + +EH+GCMV+L GRA
Sbjct: 367 MIEE---KPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRA 422
Query: 434 GMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFAL 493
G +++A +IT+ + E G + L +C + + E K +LEP N+ N+ L
Sbjct: 423 GSLKEAEDLITN-MPFEPNGII-LSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVL 480
Query: 494 LMKIYENAGRLEDMERVRMML 514
L +Y R +D V+ ++
Sbjct: 481 LRNLYAADKRWDDFGMVKNVM 501
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 189/381 (49%), Gaps = 23/381 (6%)
Query: 116 LRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIAL 175
+ NV + +K + + AS + A LFDQ QRD S F NS+I Y + Y D+ AL
Sbjct: 6 IETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDS-FLSNSMIKAYLETRQYPDSFAL 64
Query: 176 YFQMVEEGV-EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYP 234
Y + +E PD FTF + K C+ + G ++H R GF D +VDMY
Sbjct: 65 YRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYA 124
Query: 235 KCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSIST 294
K G + AR F+ M R VSW ++++ Y+ G A F QM D V +
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNA 181
Query: 295 ILTG-VSSMDL--GVQIHGWVIRRGV-EWNLSIANSLIIAYSKHGRLDTARWLFNLMPER 350
++ G V S D+ ++ + + V W ++I Y +D AR LF+ MPER
Sbjct: 182 MMDGFVKSGDMTSARRLFDEMTHKTVITW-----TTMIHGYCNIKDIDAARKLFDAMPER 236
Query: 351 DVVSWNSIISAHCKHR---EALALFEQME-EAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
++VSWN++I +C+++ E + LF++M+ + PD +T +S+L A + G ++ G
Sbjct: 237 NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 407 YALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYL 466
+ + K K+ ++ ++++Y + G +EKA I + + A W A+++ L
Sbjct: 297 HCFVQRK-KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS---WNAMIHGYAL 352
Query: 467 HGSV-AIGEIAANKLFDLEPD 486
+G+ A ++ + + +PD
Sbjct: 353 NGNARAALDLFVTMMIEEKPD 373
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 224/454 (49%), Gaps = 28/454 (6%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED----AHDLF 143
+ SL+ R ++ H L L +N SKL+ + + A +F
Sbjct: 11 WKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIF 70
Query: 144 DQMSQRDASAFPWNSLI-----SGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
D S ++F ++++I S LGL L + EE + P TF ++ C
Sbjct: 71 D--SIEIPNSFVYDTMIRICSRSSQPHLGL--RYFLLMVKEEEEDITPSYLTFHFLIVAC 126
Query: 199 AGLGLLEVGEEVHRHAVRAG-FGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW 257
VG+++H V+ G F +DG ++ +Y + + ARK+F+ + + D V W
Sbjct: 127 LKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKW 186
Query: 258 NSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIR 314
+ ++ YV GL E ++ F +M++ G +PD S++T LT V ++ G IH +V +
Sbjct: 187 DVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKK 246
Query: 315 -RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALA 370
R +E ++ + +L+ Y+K G ++TA +F + R+V SW ++I + + ++A
Sbjct: 247 KRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATT 306
Query: 371 LFEQME-EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNL 429
+++E E G+KPD + + +L+ACA+ G + +G + M +Y I P EH+ C+V+L
Sbjct: 307 CLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDL 366
Query: 430 YGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDN-- 487
RAG ++ A +I A + WGALL C H +V +GE+A L DLE N
Sbjct: 367 MCRAGRLDDALDLIEKMPMKPLA--SVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVE 424
Query: 488 --EHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
E L IY + R + +VR M+ RG+
Sbjct: 425 EEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGI 458
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 227/456 (49%), Gaps = 47/456 (10%)
Query: 106 QVHRLIPTVLLRKNVGVTSKLVRLYA--SFGYMEDAHDLFDQMSQRDASAFPWNSLISGY 163
++H L+ T+ L + S+ + A S G ++ A+ ++S D + WN +I G+
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLS--DPPNYGWNFVIRGF 83
Query: 164 AQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDG 223
+ + +I++Y QM+ G+ PD T+P ++K + L ++G +H V++G D
Sbjct: 84 SNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDL 143
Query: 224 LGLNALV-------------------------------DMYPKCGHIVKARKIFNRMHRR 252
N L+ D Y K G +V AR +F+ M R
Sbjct: 144 FICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSER 203
Query: 253 DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC-KPDFVSISTILTGVS---SMDLGVQI 308
D V+W+SM+ YV G +A++ F QM+ G K + V++ +++ + +++ G +
Sbjct: 204 DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTV 263
Query: 309 HGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLF--NLMPERDVVSWNSIISAHCKH- 365
H +++ + + + SLI Y+K G + A +F + E D + WN+II H
Sbjct: 264 HRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
Query: 366 --REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH 423
RE+L LF +M E+ + PD+ITF+ LL+AC++ GLV + + + E +P EH+
Sbjct: 324 FIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHY 382
Query: 424 GCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDL 483
CMV++ RAG+V+ A+ I++ + + G + GALL C HG++ + E KL +L
Sbjct: 383 ACMVDVLSRAGLVKDAHDFISE-MPIKPTG-SMLGALLNGCINHGNLELAETVGKKLIEL 440
Query: 484 EPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+P N+ + L +Y + +R + +G+
Sbjct: 441 QPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGV 476
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
S++ C A+ G VHR I V L V + + L+ +YA G + DA +F + S +
Sbjct: 246 SVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK 305
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+ A WN++I G A G +++ L+ +M E ++PD TF +L C+ GL++
Sbjct: 306 ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWH 365
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSW-NSMLTAYVHHG 268
+ +G +VD+ + G + A + M + + S ++L ++HG
Sbjct: 366 FFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHG 425
Query: 269 LEVEAMDTFCQMVLE 283
+E +T + ++E
Sbjct: 426 -NLELAETVGKKLIE 439
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 253/550 (46%), Gaps = 110/550 (20%)
Query: 45 KPKSTPLLIHQQPYPQTKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHG 104
KPKS+P I+ +P D +AS D + SL+ C + ++RH
Sbjct: 9 KPKSSPAKIY---FPA-----------DRQASP------DESHFISLIHACKDTASLRH- 47
Query: 105 SQVHRLIPTVLLRKNV---GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLIS 161
VH I LR+ V V ++LV + + + +F +R+ F N+LI
Sbjct: 48 --VHAQI----LRRGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNP--FVLNALIR 99
Query: 162 GYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGN 221
G + ++ ++ + M+ GV+PD TFP VLK + LG +G +H ++
Sbjct: 100 GLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDC 159
Query: 222 DGLGLNALVDMYPKCGHIVKARKIFNR--------------------------------- 248
D +LVDMY K G + A ++F
Sbjct: 160 DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLF 219
Query: 249 --MHRRDSVSWNSMLTAYVHHG--------LEV-----------------------EAMD 275
M R+S SW++++ YV G E+ A+
Sbjct: 220 RSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAIS 279
Query: 276 TFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYS 332
T+ +M+ +G KP+ +I+ +L+ S ++ G++IHG+++ G++ + +I +L+ Y+
Sbjct: 280 TYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYA 339
Query: 333 KHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDKITFVS 389
K G LD A +F+ M +D++SW ++I + H + +A+ F QM +G KPD++ F++
Sbjct: 340 KCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLA 399
Query: 390 LLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGS 449
+L+AC V+ G+ + M Y I+P ++H+ +V+L GRAG + +A+ ++ +
Sbjct: 400 VLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVEN---- 455
Query: 450 EAAGP--TQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDM 507
P T W AL +C H E + L +L+P+ ++ L K + + G ++D+
Sbjct: 456 MPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDV 515
Query: 508 ERVRMMLVDR 517
E+ R+ L R
Sbjct: 516 EKRRLSLQKR 525
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 180/343 (52%), Gaps = 12/343 (3%)
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG-NDGLGLNALVDMYPKCGHIVKA 242
VEP+ T+ +L+ C G+ +H GF N+ L + L+ +Y G + A
Sbjct: 106 VEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLI-LYALSGDLQTA 162
Query: 243 RKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM 302
+F + RD + WN+M++ YV GLE E + + M PD + +++ S++
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 303 DL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII 359
D G + H +I+R ++ N+ + ++L+ Y K +F+ + R+V++W S+I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 360 SA---HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKI 416
S H K E L FE+M+E G +P+ +TF+ +L+AC + GLV+ G + M Y I
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGI 342
Query: 417 KPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIA 476
+P +H+ MV+ GRAG +++AY + E P WG+LL +C +HG+V + E+A
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEH--PPVWGSLLGACRIHGNVKLLELA 400
Query: 477 ANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
A K +L+P N N+ + Y + G E +VR + + G+
Sbjct: 401 ATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGV 443
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 156/300 (52%), Gaps = 10/300 (3%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G++++PE YA LL+ C + + G ++H + V N + KL+ LYA G ++ A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
LF + RD PWN++ISGY Q GL + + +Y+ M + + PD +TF V + C+
Sbjct: 163 GILFRSLKIRDL--IPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNS 259
L LE G+ H ++ ++ + +ALVDMY KC ++F+++ R+ ++W S
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRR- 315
+++ Y +HG E + F +M EGC+P+ V+ +LT + +D G + H + ++R
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRD 339
Query: 316 -GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERD-VVSWNSIISAHCKHREALALFE 373
G+E +++ + GRL A P ++ W S++ A C+ + L E
Sbjct: 340 YGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGA-CRIHGNVKLLE 398
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 226/413 (54%), Gaps = 25/413 (6%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
+N+ + +V+ G +++A +LF++M +RD + W +++ G A+ G D+A L+
Sbjct: 169 RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS--WTAMVDGLAKNGKVDEARRLFD 226
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCG 237
M E ++ ++ ++ A ++ +++ + F + N ++ + +
Sbjct: 227 CMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNR 278
Query: 238 HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC-KPD---FVSIS 293
+ KA +F+RM ++ +SW +M+T YV + EA++ F +M+ +G KP+ +VSI
Sbjct: 279 EMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 294 TILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN--LMPERD 351
+ + ++ + G QIH + + + N + ++L+ YSK G L AR +F+ L+ +RD
Sbjct: 339 SACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRD 398
Query: 352 VVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
++SWNS+I+ + H +EA+ ++ QM + G KP +T+++LL AC++ GLV G+ +
Sbjct: 399 LISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFK 458
Query: 409 LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ--WGALLYSCYL 466
+ + EH+ C+V+L GRAG ++ +T+ I + A ++ +GA+L +C +
Sbjct: 459 DLVRDESLPLREEHYTCLVDLCGRAGRLKD----VTNFINCDDARLSRSFYGAILSACNV 514
Query: 467 HGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
H V+I + K+ + D+ + L+ IY G+ E+ +RM + ++GL
Sbjct: 515 HNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGL 567
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 181/380 (47%), Gaps = 61/380 (16%)
Query: 134 GYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
G + +A LFD + +RD W +I+GY +LG +A L+ ++ ++ T+
Sbjct: 60 GKIAEARKLFDGLPERDV--VTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTA 114
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
++ L + E + + + N ++D Y + G I KA ++F+ M R+
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMPERN 170
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHG 310
VSWNSM+ A V G EAM+ F +M + D VS + ++ G++ +D ++
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFD 226
Query: 311 WVIRRG-VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE-- 367
+ R + W N++I Y+++ R+D A LF +MPERD SWN++I+ ++RE
Sbjct: 227 CMPERNIISW-----NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMN 281
Query: 368 -ALALFEQMEE--------------------------------AGVKPDKITFVSLLSAC 394
A LF++M E VKP+ T+VS+LSAC
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
Query: 395 AYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP 454
+ L + +G +++ L+++ K + ++N+Y ++G + A + +G+ +
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIV-TSALLNMYSKSGELIAARKMFDNGLVCQ-RDL 399
Query: 455 TQWGALL--YSCYLHGSVAI 472
W +++ Y+ + HG AI
Sbjct: 400 ISWNSMIAVYAHHGHGKEAI 419
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 139/299 (46%), Gaps = 63/299 (21%)
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRV 194
M A LFD+M +++ W ++I+GY + ++A+ ++ +M+ +G V+P++ T+ +
Sbjct: 280 MNKACGLFDRMPEKNV--ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNR--MHRR 252
L C+ L L G+++H+ ++ + + +AL++MY K G ++ ARK+F+ + +R
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQR 397
Query: 253 DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWV 312
D +SWNSM+ Y HHG EA++ + QM G KP V+ +L S H +
Sbjct: 398 DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACS--------HAGL 449
Query: 313 IRRGVEW--------------------------------------------NLSIANSLI 328
+ +G+E+ + S +++
Sbjct: 450 VEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAIL 509
Query: 329 IAYSKHGRLDTARWLFNLMPER------DVVSWNSIISAHCKHREALALFEQMEEAGVK 381
A + H + A+ + + E V ++I +A+ K EA + +M+E G+K
Sbjct: 510 SACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLK 568
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 103/183 (56%), Gaps = 13/183 (7%)
Query: 235 KCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSIST 294
K G I +ARK+F+ + RD V+W ++T Y+ G EA + F ++ + + V+ +
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTA 114
Query: 295 ILTG-VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVV 353
+++G + S L I + + E N+ N++I Y++ GR+D A LF+ MPER++V
Sbjct: 115 MVSGYLRSKQLS--IAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 354 SWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
SWNS++ A + EA+ LFE+M + D +++ +++ A G V++ RL+ M
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 411 TEK 413
E+
Sbjct: 229 PER 231
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 20/226 (8%)
Query: 83 IDPEI--YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
+ P + Y S+L C + G Q+H+LI + +KN VTS L+ +Y+ G + A
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 141 DLFDQ--MSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
+FD + QRD WNS+I+ YA G +AI +Y QM + G +P T+ +L C
Sbjct: 387 KMFDNGLVCQRDL--ISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFAC 444
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGL-----NALVDMYPKCGHIVKARKIFNRMHRRD 253
+ GL+E G E + VR ++ L L LVD+ + G + N R
Sbjct: 445 SHAGLVEKGMEFFKDLVR----DESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARL 500
Query: 254 SVS-WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTI 295
S S + ++L+A H EV + VLE D +V +S I
Sbjct: 501 SRSFYGAILSACNVHN-EVSIAKEVVKKVLETGSDDAGTYVLMSNI 545
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 180/345 (52%), Gaps = 10/345 (2%)
Query: 182 EGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
+G D + ++ C G H A++ GF +D ++LV +Y G +
Sbjct: 114 DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVEN 173
Query: 242 ARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTG 298
A K+F M R+ VSW +M++ + + + +M P+ F ++ + TG
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 299 VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI 358
++ G +H + G++ L I+NSLI Y K G L A +F+ +DVVSWNS+
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSM 293
Query: 359 ISAHCKH---REALALFE-QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKY 414
I+ + +H +A+ LFE M ++G KPD IT++ +LS+C + GLV +G + + LM E +
Sbjct: 294 IAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-H 352
Query: 415 KIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGE 474
+KP + H+ C+V+L GR G++++A +I + WG+LL+SC +HG V G
Sbjct: 353 GLKPELNHYSCLVDLLGRFGLLQEALELIENM--PMKPNSVIWGSLLFSCRVHGDVWTGI 410
Query: 475 IAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
AA + LEPD L +Y + G ++ VR ++ D+GL
Sbjct: 411 RAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGL 455
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 182/386 (47%), Gaps = 50/386 (12%)
Query: 67 EQVLKDIEASIEK-GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
E +L+D +S+++ G D +S + +C ++ R GS H L +V + S
Sbjct: 101 EVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSS 160
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
LV LY G +E+A+ +F++M +R+ W ++ISG+AQ D + LY +M + +
Sbjct: 161 LVVLYRDSGEVENAYKVFEEMPERNV--VSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
P+ +TF +L C G G L G VH + G + N+L+ MY KCG + A +I
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTF-CQMVLEGCKPDFVSISTILTGVSSMDL 304
F++ +D VSWNSM+ Y HGL ++A++ F M G KPD ++ +L+
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCR---- 334
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIIS 360
H +++ G R FNLM E ++ ++ ++
Sbjct: 335 ----HAGLVKEG------------------------RKFFNLMAEHGLKPELNHYSCLVD 366
Query: 361 AHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIK 417
+ +EAL L E M +KP+ + + SLL +C G V G+R E+ ++
Sbjct: 367 LLGRFGLLQEALELIENMP---MKPNSVIWGSLLFSCRVHGDVWTGIR---AAEERLMLE 420
Query: 418 P-IMEHHGCMVNLYGRAGMVEKAYSI 442
P H + NLY G ++A ++
Sbjct: 421 PDCAATHVQLANLYASVGYWKEAATV 446
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 225/449 (50%), Gaps = 38/449 (8%)
Query: 87 IYASLLETCYRSQ--------AIRH--GSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+++S+L C+ ++ + R+ G QVH L + L ++ V + ++ +Y G
Sbjct: 149 LFSSMLSHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMY---GRC 205
Query: 137 EDAHDLFDQMSQRDASAFP----WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFP 192
D ++ + +A F WNS+I+ + L AI ++ +M +GV D T
Sbjct: 206 HDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT-- 263
Query: 193 RVLKVCAGL---------GLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPK-CGHIVKA 242
+L +C+ L + + ++H V++G AL+ +Y +
Sbjct: 264 -LLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDC 322
Query: 243 RKIFNRM-HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL---TG 298
K+F M H RD V+WN ++TA+ + E A+ F Q+ E PD+ + S++L G
Sbjct: 323 YKLFMEMSHCRDIVAWNGIITAFAVYDPE-RAIHLFGQLRQEKLSPDWYTFSSVLKACAG 381
Query: 299 VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI 358
+ + + IH VI+ G + + NSLI AY+K G LD +F+ M RDVVSWNS+
Sbjct: 382 LVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSM 441
Query: 359 ISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKP 418
+ A+ H + ++ ++ + PD TF++LLSAC++ G V +G+R++ M EK + P
Sbjct: 442 LKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLP 501
Query: 419 IMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAAN 478
+ H+ C++++ RA +A +I A W ALL SC HG+ +G++AA+
Sbjct: 502 QLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDA--VVWIALLGSCRKHGNTRLGKLAAD 559
Query: 479 KLFDL-EPDNEHNFALLMKIYENAGRLED 506
KL +L EP N ++ + IY G +
Sbjct: 560 KLKELVEPTNSMSYIQMSNIYNAEGSFNE 588
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 207/443 (46%), Gaps = 31/443 (6%)
Query: 86 EIYASLLETCYRSQAIRHGSQVHR--LIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLF 143
+ YA+L + C + + G +H L +NV + + L+ +YA G + A +F
Sbjct: 60 QAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVF 119
Query: 144 DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGL 203
D M +R+ + W +LI+GY Q G + L+ M+ P+ FT VL C
Sbjct: 120 DTMPERNVVS--WTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR---- 172
Query: 204 LEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC---GHIVKARKIFNRMHRRDSVSWNSM 260
E G++VH A++ G NA++ MY +C +A +F + ++ V+WNSM
Sbjct: 173 YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSM 232
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV-SSMDL--------GVQIHGW 311
+ A+ L +A+ F +M +G D ++ I + + S DL +Q+H
Sbjct: 233 IAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSL 292
Query: 312 VIRRGVEWNLSIANSLIIAYSK--HGRLDTARWLFNLMPERDVVSWNSIISAHCKH--RE 367
++ G+ +A +LI YS+ D + + RD+V+WN II+A +
Sbjct: 293 TVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPER 352
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
A+ LF Q+ + + PD TF S+L ACA L + ++A + + + + ++ ++
Sbjct: 353 AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS-LI 411
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDN 487
+ Y + G ++ + D ++ W ++L + LHG V + + D+ PD+
Sbjct: 412 HAYAKCGSLDLCMRVFDD---MDSRDVVSWNSMLKAYSLHGQVD-SILPVFQKMDINPDS 467
Query: 488 EHNFALLMKIYENAGRLEDMERV 510
F L+ +AGR+E+ R+
Sbjct: 468 A-TFIALLSACSHAGRVEEGLRI 489
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 200/397 (50%), Gaps = 56/397 (14%)
Query: 173 IALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDM 232
I++Y +M V PD TFP +L L +G+ H + G D +L++M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 233 YPKCGH-------------------------------IVKARKIFNRMHRRDSVSWNSML 261
Y CG I ARK+F+ M R+ +SW+ ++
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 262 TAYVHHGLEVEAMDTFCQMVLEG-----CKPDFVSISTILTG---VSSMDLGVQIHGWVI 313
YV G EA+D F +M L +P+ ++ST+L+ + +++ G +H ++
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFN-LMPERDVVSWNSIISAHCKH---REAL 369
+ VE ++ + +LI Y+K G L+ A+ +FN L ++DV +++++I + E
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 370 ALFEQMEEA-GVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
LF +M + + P+ +TFV +L AC + GL+N+G + +M E++ I P ++H+GCMV+
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVD 346
Query: 429 LYGRAGMVEKAYSIITDGIGSEAAGPTQ-----WGALLYSCYLHGSVAIGEIAANKLFDL 483
LYGR+G++++A S I A+ P + WG+LL + G + E A +L +L
Sbjct: 347 LYGRSGLIKEAESFI-------ASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIEL 399
Query: 484 EPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
+P N + LL +Y GR +++ +R + +G++
Sbjct: 400 DPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGIN 436
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 138/294 (46%), Gaps = 18/294 (6%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
G+ DP + SLL +R +V + K++ + +V YA G ++DA
Sbjct: 92 GLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGS----KDLPAWNSVVNAYAKAGLIDDA 147
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV-----EEGVEPDLFTFPRV 194
LFD+M +R+ W+ LI+GY G Y +A+ L+ +M E V P+ FT V
Sbjct: 148 RKLFDEMPERNV--ISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM-HRRD 253
L C LG LE G+ VH + + D + AL+DMY KCG + +A+++FN + ++D
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVL-EGCKPDFVSISTILTGVSSMDL---GVQIH 309
++++M+ +GL E F +M + P+ V+ IL L G
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 310 GWVIRR-GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISA 361
+I G+ ++ ++ Y + G + A MP E DV+ W S++S
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 6/190 (3%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
E +R + +++L C R A+ G VH I + ++ + + L+ +YA G +E
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 138 DAHDLFDQM-SQRDASAFPWNSLISGYAQLGLYDDAIALYFQM-VEEGVEPDLFTFPRVL 195
A +F+ + S++D A+ +++I A GL D+ L+ +M + + P+ TF +L
Sbjct: 252 RAKRVFNALGSKKDVKAY--SAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGIL 309
Query: 196 KVCAGLGLLEVGEEVHRHAVRA-GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR-D 253
C GL+ G+ + + G +VD+Y + G I +A M D
Sbjct: 310 GACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPD 369
Query: 254 SVSWNSMLTA 263
+ W S+L+
Sbjct: 370 VLIWGSLLSG 379
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 227/482 (47%), Gaps = 46/482 (9%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+G +D ++LL +C S + G ++H + L + + V + L+ Y+ F M+
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK 338
Query: 139 AHDLFDQMSQRDASAFP-----------------------------WNSLISGYAQLGLY 169
L++ M +DA F +N+L++G+ + G
Sbjct: 339 VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHG 398
Query: 170 DDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNAL 229
A+ L+ M++ GVE F+ + C + +V E++H ++ G + AL
Sbjct: 399 LKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTAL 458
Query: 230 VDMYPKCGHIVKARKIFNR--MHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE-GCK 286
+DM +C + A ++F++ + S + S++ Y +GL +A+ F + + E
Sbjct: 459 LDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLF 518
Query: 287 PDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWL 343
D VS++ IL ++ ++G QIH + ++ G ++S+ NSLI Y+K D A +
Sbjct: 519 LDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKI 578
Query: 344 FNLMPERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYL--G 398
FN M E DV+SWNS+IS + R EALAL+ +M E +KPD IT ++SA Y
Sbjct: 579 FNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESN 638
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP--TQ 456
++ L+ M Y I+P EH+ V + G G++E+A D I S P +
Sbjct: 639 KLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEA----EDTINSMPVQPEVSV 694
Query: 457 WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVD 516
ALL SC +H + ++ + A + +P+ + L IY +G E +R + +
Sbjct: 695 LRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRE 754
Query: 517 RG 518
RG
Sbjct: 755 RG 756
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 175/353 (49%), Gaps = 55/353 (15%)
Query: 97 RSQAIRHGSQVHRLIPTVLLR---KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASA 153
R A H +V + + L+ + + + L+ Y G+ +A +F +S +
Sbjct: 88 RLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSS--PTV 145
Query: 154 FPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRVLKVCAGLGLLEVGEEVHR 212
+ +LISG+++L L +A+ ++F+M + G V+P+ +TF +L C + +G ++H
Sbjct: 146 VSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHG 205
Query: 213 HAVRAGFGNDGLGLNALVDMYPK-----CGHIVKARKIFNRMHRRDSVSWNSMLTAYVHH 267
V++GF N N+L+ +Y K C ++K +F+ + +RD SWN+++++ V
Sbjct: 206 LIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK---LFDEIPQRDVASWNTVVSSLVKE 262
Query: 268 GLEVEAMDTFCQM-VLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSI 323
G +A D F +M +EG D ++ST+L+ + + G ++HG IR G+ LS+
Sbjct: 263 GKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSV 322
Query: 324 ANSLIIAYSK-------------------------------HGRLDTARWLFNLMPERDV 352
N+LI YSK G +D+A +F + E++
Sbjct: 323 NNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNT 382
Query: 353 VSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
+++N++++ C++ +AL LF M + GV+ + S + AC GLV++
Sbjct: 383 ITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSE 432
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 120/233 (51%), Gaps = 3/233 (1%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLV 127
+ LK +++G+ + S ++ C + Q+H N + + L+
Sbjct: 400 KALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALL 459
Query: 128 RLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQ-MVEEGVEP 186
+ M DA ++FDQ S+ S+I GYA+ GL D A++L+ + + E+ +
Sbjct: 460 DMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFL 519
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGND-GLGLNALVDMYPKCGHIVKARKI 245
D + +L VC LG E+G ++H +A++AG+ +D LG N+L+ MY KC A KI
Sbjct: 520 DEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLG-NSLISMYAKCCDSDDAIKI 578
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG 298
FN M D +SWNS+++ Y+ EA+ + +M + KPD ++++ +++
Sbjct: 579 FNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISA 631
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 165/367 (44%), Gaps = 47/367 (12%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYA--SFGYMEDAHDLFDQ 145
+ ++L C R G Q+H LI +V V++ L+ LY S +D LFD+
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDE 243
Query: 146 MSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE-EGVEPDLFTFPRVLKVCAGLGLL 204
+ QRD ++ WN+++S + G A L+++M EG D FT +L C +L
Sbjct: 244 IPQRDVAS--WNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVL 301
Query: 205 EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAY 264
G E+H A+R G + NAL+ Y K + K ++ M +D+V++ M+TAY
Sbjct: 302 LRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAY 361
Query: 265 VHHGL-------------------------------EVEAMDTFCQMVLEGCKPDFVSIS 293
+ G+ ++A+ F M+ G + S++
Sbjct: 362 MSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLT 421
Query: 294 TILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER 350
+ + VS + QIHG+ I+ G +N I +L+ ++ R+ A +F+ P
Sbjct: 422 SAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSN 481
Query: 351 --DVVSWNSIISAHCKH---REALALFEQ-MEEAGVKPDKITFVSLLSACAYLGLVNDGV 404
+ SII + ++ +A++LF + + E + D+++ +L+ C LG G
Sbjct: 482 LDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGY 541
Query: 405 RL--YAL 409
++ YAL
Sbjct: 542 QIHCYAL 548
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 231/491 (47%), Gaps = 95/491 (19%)
Query: 104 GSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGY 163
G + +L+ + KNV + +V Y +G + +A+ LF +M +R+ W ++ISG+
Sbjct: 215 GMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI--VSWTAMISGF 272
Query: 164 AQLGLYDDAIALYFQMVE--EGVEPDLFTFPRVLKVCAGLGL--LEVGEEVHRHAVRAG- 218
A LY +A+ L+ +M + + V P+ T + C GLG+ +GE++H + G
Sbjct: 273 AWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGW 332
Query: 219 ----------------FGNDGL---------------GLNALVDMYPKCGHIVKARKIFN 247
+ + GL N +++ Y K G + +A +F
Sbjct: 333 ETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFE 392
Query: 248 RMHR-RDSVSWNSMLTAYVHHG-------------------------------LEVEAMD 275
R+ D VSW SM+ Y+ G L EA
Sbjct: 393 RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAAS 452
Query: 276 TFCQMVLEGCKPDFVSISTILT---GVSSMDLGVQIHGWVIRRGVEW--NLSIANSLIIA 330
MV G KP + S +L+ S++D G IH + + + +L + NSL+
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSM 512
Query: 331 YSKHGRLDTARWLFNLMPERDVVSWNSII---SAHCKHREALALFEQMEEAGVKPDKITF 387
Y+K G ++ A +F M ++D VSWNS+I S H +AL LF++M ++G KP+ +TF
Sbjct: 513 YAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTF 572
Query: 388 VSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGI 447
+ +LSAC++ GL+ G+ L+ M E Y I+P ++H+ M++L GRAG +++A I+
Sbjct: 573 LGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFIS--- 629
Query: 448 GSEAAGP-----TQWGALLYSCYLH----GSVAIGEIAANKLFDLEPDNEHNFALLMKIY 498
A P T +GALL C L+ + I E AA +L +L+P N L +Y
Sbjct: 630 ----ALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVY 685
Query: 499 ENAGRLEDMER 509
GR DME+
Sbjct: 686 AGLGR-HDMEK 695
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 153/334 (45%), Gaps = 62/334 (18%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
+ L+ YA GY+++A LF+ M +R+ N++++GY + ++A L+ +M +
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNI--VTCNAMLTGYVKCRRMNEAWTLFREMPK-- 136
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
++ ++ +L G E E+ + N LV + G + KA+
Sbjct: 137 ---NVVSWTVMLTALCDDGRSEDAVELFDEMPERNV----VSWNTLVTGLIRNGDMEKAK 189
Query: 244 KIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD 303
++F+ M RD VSWN+M+ Y+ + EA F M
Sbjct: 190 QVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS---------------------- 227
Query: 304 LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC 363
E N+ S++ Y ++G + A LF MPER++VSW ++IS
Sbjct: 228 --------------EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFA 273
Query: 364 ---KHREALALFEQMEE--AGVKPDKITFVSLLSACAYLGL--VNDGVRLYA-LMTEKYK 415
+REAL LF +M++ V P+ T +SL AC LG+ G +L+A +++ ++
Sbjct: 274 WNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWE 333
Query: 416 IKPIMEHHG----CMVNLYGRAGMVEKAYSIITD 445
++H G +V++Y +G++ A S++ +
Sbjct: 334 ---TVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIP--TVLLRKNVGVTSKLVRLYASFGYME 137
G++ Y+ LL + + + G +H +I T ++ + + LV +YA G +E
Sbjct: 461 GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
DA+++F +M Q+D WNS+I G + GL D A+ L+ +M++ G +P+ TF VL
Sbjct: 521 DAYEIFAKMVQKD--TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Query: 198 CAGLGLLEVGEEVHR 212
C+ GL+ G E+ +
Sbjct: 579 CSHSGLITRGLELFK 593
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 173/467 (37%), Gaps = 122/467 (26%)
Query: 109 RLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGL 168
R++ V+ +N+ + ++ Y M +A LF +M + S W +++ G
Sbjct: 97 RVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS---WTVMLTALCDDGR 153
Query: 169 YDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE-EVHRHAVRAGFGNDGLGLN 227
+DA+ L+ +M E V ++ ++ GL+ G+ E + A D + N
Sbjct: 154 SEDAVELFDEMPERNV----VSWNTLVT-----GLIRNGDMEKAKQVFDAMPSRDVVSWN 204
Query: 228 ALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQM------- 280
A++ Y + + +A+ +F M ++ V+W SM+ Y +G EA FC+M
Sbjct: 205 AMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVS 264
Query: 281 ---VLEG----------------CKPDFVSIS----TILT--------GVSSMDLGVQIH 309
++ G K D ++S T+++ GV LG Q+H
Sbjct: 265 WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLH 324
Query: 310 GWVIRRGVE--------------------------------WNLSIANSLIIAYSKHGRL 337
VI G E ++L N +I Y K+G L
Sbjct: 325 AQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDL 384
Query: 338 DTARWLFNLMPE-RDVVSWNSIISAHCK-------------------------------- 364
+ A LF + D VSW S+I + +
Sbjct: 385 ERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQN 444
Query: 365 --HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKI-KPIME 421
EA +L M G+KP T+ LLS+ ++ G ++ ++ + P +
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 422 HHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
+V++Y + G +E AY I + + W +++ HG
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKMVQKDT---VSWNSMIMGLSHHG 548
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 313 IRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EAL 369
I R V W SL+ Y+K G LD AR LF +MPER++V+ N++++ + K R EA
Sbjct: 74 INRVVYWT-----SLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAW 128
Query: 370 ALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
LF +M + + +++ +L+A G D V L+ M E+
Sbjct: 129 TLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMPER 167
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 229/471 (48%), Gaps = 36/471 (7%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
GI S+L C + + + G +H L V V + LV LY+ GY+E A
Sbjct: 99 GIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELA 158
Query: 140 HDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVE-EGVEPDLFTFPRVLK-- 196
FD +++++ + WNSL+ GY + G D+A ++ ++ E + V +L K
Sbjct: 159 KKAFDDIAEKNTVS--WNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGD 216
Query: 197 ---VCAGLGLLEVGEEVHRHAVRAGFGN-----------------DGLGLNALVDMYPKC 236
C+ + + + + G+ N +G+ ++ Y K
Sbjct: 217 MGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKL 276
Query: 237 GHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC--KPDFVSIST 294
G + A ++F M ++D + +++M+ Y +G +A+ F QM+ +PD +++S+
Sbjct: 277 GDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSS 336
Query: 295 ILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERD 351
+++ S + G + ++ G++ + ++ SLI Y K G A +F+ + ++D
Sbjct: 337 VVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKD 396
Query: 352 VVSWNSIISA---HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
VS++++I + EA +LF M E + P+ +TF LLSA ++ GLV +G + +
Sbjct: 397 TVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFN 456
Query: 409 LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
M + + ++P +H+G MV++ GRAG +E+AY +I AG WGALL + LH
Sbjct: 457 SMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGV--WGALLLASGLHN 513
Query: 469 SVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+V GEIA + LE D + L IY + GR +D VR + ++ L
Sbjct: 514 NVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKL 564
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 183/409 (44%), Gaps = 54/409 (13%)
Query: 153 AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHR 212
+F W L+ +Q + + + +Y M G+ P VL+ C + + G+ +H
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 213 HAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVE 272
A++ G LV +Y + G+I A+K F+ + +++VSWNS+L Y+ G E
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 273 AMDTFCQMVLEGCKPDFVSISTILTGVSSM-DLGVQ---IHGWVIRRGVEWNLSIAN--- 325
A F ++ + D VS + I++ + D+G ++ WN+ I
Sbjct: 189 ARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVN 244
Query: 326 -----------------------SLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH 362
++I Y+K G + +A LF LM ++D + ++++I+ +
Sbjct: 245 CREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACY 304
Query: 363 C---KHREALALFEQMEEAG--VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK-YKI 416
K ++AL LF QM E ++PD+IT S++SA + LG + G + + +TE KI
Sbjct: 305 TQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKI 364
Query: 417 KPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIA 476
++ +++LY + G KA+ + ++ + A++ C ++G
Sbjct: 365 DDLLS--TSLIDLYMKGGDFAKAFKMFSN---LNKKDTVSYSAMIMGCGINGMAT----E 415
Query: 477 ANKLFDLE-----PDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
AN LF P N F L+ Y ++G +++ + + D L+
Sbjct: 416 ANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLE 464
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 202/406 (49%), Gaps = 44/406 (10%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
+N+LI Y G Y ++AL+ M+ V+P+ TFP ++K + G +H A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFN---------------------------- 247
+ GF D + V Y + G + +RK+F+
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 248 ---RMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG---CKPDFVSISTILTGVSS 301
RM D VSW +++ + GL +A+ F +M+ P+ + ++L+ ++
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 302 MD-----LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWN 356
D LG QIHG+V+ + + ++ +L+ Y K G L+ A +F+ + ++ V +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 357 SIISA---HCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
+IISA + + ++AL +FE M+ + V P+ IT +++L+ACA LV+ G++L++ + +
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 414 YKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIG 473
YKI P EH+GC+V+L GRAG++ A + I A + GALL +C +H + +G
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDA--SVLGALLGACKIHENTELG 411
Query: 474 EIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
+L L+P + + L + E++R +++ G+
Sbjct: 412 NTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGI 457
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 191/367 (52%), Gaps = 16/367 (4%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEG------VEPDLFTFPRVLKVCAGLGLLEVGEE 209
WN++I G+A A + Y M+++ D T LK CA ++
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGL 269
+H R G D L L+D Y K G ++ A K+F+ M RD SWN+++ V
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 270 EVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEW-NLSIANSLI 328
EAM+ + +M EG + V++ L S LG G I G N+ ++N+ I
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSH--LGDVKEGENIFHGYSNDNVIVSNAAI 248
Query: 329 IAYSKHGRLDTARWLF-NLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDK 384
YSK G +D A +F ++ VV+WN++I+ H E AL +F+++E+ G+KPD
Sbjct: 249 DMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDD 308
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
+++++ L+AC + GLV G+ ++ M K ++ M+H+GC+V+L RAG + +A+ II
Sbjct: 309 VSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIIC 367
Query: 445 DGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRL 504
S P W +LL + ++ V + EIA+ ++ ++ +N+ +F LL +Y GR
Sbjct: 368 S--MSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRW 425
Query: 505 EDMERVR 511
+D+ RVR
Sbjct: 426 KDVGRVR 432
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 22/349 (6%)
Query: 82 RIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHD 141
R+D + L+ C R+ Q+H I L + + + L+ Y+ G + A+
Sbjct: 106 RVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK 165
Query: 142 LFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGL 201
LFD+M RD ++ WN+LI+G +A+ LY +M EG+ T L C+ L
Sbjct: 166 LFDEMPVRDVAS--WNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHL 223
Query: 202 GLLEVGEEVHRHAVRAGFGNDGLGL-NALVDMYPKCGHIVKARKIFNRMHRRDS-VSWNS 259
G ++ GE + G+ ND + + NA +DMY KCG + KA ++F + + S V+WN+
Sbjct: 224 GDVKEGENIFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNT 278
Query: 260 MLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRG 316
M+T + HG A++ F ++ G KPD VS LT L G+ + + +G
Sbjct: 279 MITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKG 338
Query: 317 VEWNLSIANSLIIAYSKHGRLDTARWLF---NLMPERDVVSWNSIISAHCKHRE---ALA 370
VE N+ ++ S+ GRL A + +++P D V W S++ A + + A
Sbjct: 339 VERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIP--DPVLWQSLLGASEIYSDVEMAEI 396
Query: 371 LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
+++E GV D FV L + A G D R+ M K ++K I
Sbjct: 397 ASREIKEMGVNNDG-DFVLLSNVYAAQGRWKDVGRVRDDMESK-QVKKI 443
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 6/186 (3%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
+GIR + L C ++ G + NV V++ + +Y+ G+++
Sbjct: 204 EGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSN----DNVIVSNAAIDMYSKCGFVDK 259
Query: 139 AHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
A+ +F+Q + + S WN++I+G+A G A+ ++ ++ + G++PD ++ L C
Sbjct: 260 AYQVFEQFTGK-KSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTAC 318
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR-RDSVSW 257
GL+E G V + G + +VD+ + G + +A I M D V W
Sbjct: 319 RHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLW 378
Query: 258 NSMLTA 263
S+L A
Sbjct: 379 QSLLGA 384
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 187/379 (49%), Gaps = 13/379 (3%)
Query: 73 IEASIEKGIRIDPE-IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYA 131
E ++ GIR E ++ LL C R G QVH + V + N+ V S LV YA
Sbjct: 171 FEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYA 229
Query: 132 SFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF 191
G + A FD M ++D W ++IS ++ G AI ++ M+ P+ FT
Sbjct: 230 QCGELTSALRAFDMMEEKDV--ISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTV 287
Query: 192 PRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR 251
+LK C+ L G +VH V+ D +L+DMY KCG I RK+F+ M
Sbjct: 288 CSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN 347
Query: 252 RDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQI 308
R++V+W S++ A+ G EA+ F M + +++ +IL V ++ LG ++
Sbjct: 348 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 309 HGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCK---- 364
H +I+ +E N+ I ++L+ Y K G A + +P RDVVSW ++IS C
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISG-CSSLGH 466
Query: 365 HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHG 424
EAL ++M + GV+P+ T+ S L ACA + G ++++ + + + +
Sbjct: 467 ESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA 526
Query: 425 CMVNLYGRAGMVEKAYSII 443
++++Y + G V +A+ +
Sbjct: 527 -LIHMYAKCGFVSEAFRVF 544
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 170/317 (53%), Gaps = 8/317 (2%)
Query: 89 ASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQ 148
S+L+ C +A+R G QVH L+ +++ +V V + L+ +YA G + D +FD MS
Sbjct: 288 CSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN 347
Query: 149 RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
R+ W S+I+ +A+ G ++AI+L+ M + + T +L+ C +G L +G+
Sbjct: 348 RNT--VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGK 405
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG 268
E+H ++ + + LV +Y KCG A + ++ RD VSW +M++ G
Sbjct: 406 ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLG 465
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIAN 325
E EA+D +M+ EG +P+ + S+ L + S+ +G IH + N+ + +
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGS 525
Query: 326 SLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKP 382
+LI Y+K G + A +F+ MPE+++VSW ++I + ++ REAL L +ME G +
Sbjct: 526 ALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEV 585
Query: 383 DKITFVSLLSACAYLGL 399
D F ++LS C + L
Sbjct: 586 DDYIFATILSTCGDIEL 602
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 203/408 (49%), Gaps = 24/408 (5%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
E V +D +S + R+D YA L E S +R ++H + + + + L
Sbjct: 68 ENVNQDDSSSFDSE-RVD---YALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNL 123
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
+ G + A +FD M +++ W ++I GY + GL D+A AL+ V+ G+
Sbjct: 124 ISSCVRLGDLVYARKVFDSMPEKNT--VTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR- 180
Query: 187 DLFTFPR----VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKA 242
FT R +L +C+ E+G +VH + V+ G GN + ++LV Y +CG + A
Sbjct: 181 --FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNL-IVESSLVYFYAQCGELTSA 237
Query: 243 RKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS-- 300
+ F+ M +D +SW ++++A G ++A+ F M+ P+ ++ +IL S
Sbjct: 238 LRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEE 297
Query: 301 -SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII 359
++ G Q+H V++R ++ ++ + SL+ Y+K G + R +F+ M R+ V+W SII
Sbjct: 298 KALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSII 357
Query: 360 SAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKI 416
+AH + EA++LF M+ + + +T VS+L AC +G + G L+A + K I
Sbjct: 358 AAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII-KNSI 416
Query: 417 KPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSC 464
+ + +V LY + G A++++ + W A++ C
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDV---VSWTAMISGC 461
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 136/258 (52%), Gaps = 17/258 (6%)
Query: 227 NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCK 286
N L+ + G +V ARK+F+ M +++V+W +M+ Y+ +GLE EA F V G +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 287 PD----FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW 342
FV + + + + +LG Q+HG +++ GV NL + +SL+ Y++ G L +A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALR 239
Query: 343 LFNLMPERDVVSWNSIISAHCKHR----EALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
F++M E+DV+SW ++ISA C + +A+ +F M P++ T S+L AC+
Sbjct: 240 AFDMMEEKDVISWTAVISA-CSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK 298
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWG 458
+ G ++++L+ ++ IK + ++++Y + G + + DG+ + W
Sbjct: 299 ALRFGRQVHSLVVKRM-IKTDVFVGTSLMDMYAKCGEISDCRKVF-DGMSNR--NTVTWT 354
Query: 459 ALLYSCYLHGSVAIGEIA 476
+++ + H GE A
Sbjct: 355 SIIAA---HAREGFGEEA 369
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLV 127
+ L ++ I++G+ +P Y+S L+ C S+++ G +H + NV V S L+
Sbjct: 469 EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALI 528
Query: 128 RLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPD 187
+YA G++ +A +FD M +++ W ++I GYA+ G +A+ L ++M EG E D
Sbjct: 529 HMYAKCGFVSEAFRVFDSMPEKN--LVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVD 586
Query: 188 LFTFPRVLKVCAGLGLLEVGE 208
+ F +L C + L E E
Sbjct: 587 DYIFATILSTCGDIELDEAVE 607
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 286 KPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN 345
+ D+ ++ L + M L +IH ++ + + N+LI + + G L AR +F+
Sbjct: 82 RVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFD 141
Query: 346 LMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVK-PDKITFVSLLSACAYLGLVN 401
MPE++ V+W ++I + K+ EA ALFE + G++ ++ FV LL+ C+
Sbjct: 142 SMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFE 201
Query: 402 DGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVE---KAYSIITDGIGSEAAGPTQWG 458
G +++ M + I+E +V Y + G + +A+ ++ E W
Sbjct: 202 LGRQVHGNMVKVGVGNLIVESS--LVYFYAQCGELTSALRAFDMM------EEKDVISWT 253
Query: 459 ALLYSCYL--HGSVAIG 473
A++ +C HG AIG
Sbjct: 254 AVISACSRKGHGIKAIG 270
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 223/445 (50%), Gaps = 45/445 (10%)
Query: 118 KNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
+N+ + ++ Y+ G +E A +LFDQ++++D W ++I G + D+A+ Y
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI--VSWGTMIDGCLRKNQLDEALVYYT 294
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF----------------GN 221
+M+ G++P +L A G ++H V+ GF N
Sbjct: 295 EMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSN 354
Query: 222 D-GLGL--------------NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVH 266
D L L NAL+ + K G + +AR++F++ H +D SWN+M++ Y
Sbjct: 355 DIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQ 414
Query: 267 HGLEVEAMDTFCQMVLEG-CKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLS 322
A+ F +M+ KPD +++ ++ + +SS+ + G + H ++ + N +
Sbjct: 415 SLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDN 474
Query: 323 IANSLIIAYSKHGRLDTARWLFNL---MPERDVVSWNSIISAHCKH---REALALFEQME 376
+ ++I Y+K G ++TA +F+ + + WN+II H + AL L+ ++
Sbjct: 475 LTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQ 534
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
+KP+ ITFV +LSAC + GLV G + M + I+P ++H+GCMV+L G+AG +
Sbjct: 535 SLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRL 594
Query: 437 EKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMK 496
E+A +I A WG LL + HG+V I E+AA +L ++P + +L
Sbjct: 595 EEAKEMIKK--MPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSN 652
Query: 497 IYENAGRLEDMERVRMMLVDRGLDY 521
+Y +AGR ED+ VR + R +++
Sbjct: 653 VYADAGRWEDVALVREEMRTRDVEW 677
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 202/482 (41%), Gaps = 109/482 (22%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
S L +C S + G Q+H + L N + + ++ +YA + DA +F ++
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 150 DASAF-----------------------------PWNSLISGYAQLGLYDDAIALYFQMV 180
D+++F + +LI GYAQ + +A+ L+ +M
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
G+ + T V+ C+ LG + + A++ L+ MY C +
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQM----------VLEGC----- 285
ARK+F+ M R+ V+WN ML Y GL +A + F Q+ +++GC
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 285
Query: 286 ----------------KP------DFVSISTILTGVSSMDLGVQIHGWVIRRG------- 316
KP D +S S G S G+Q+HG +++RG
Sbjct: 286 LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSK---GLQLHGTIVKRGFDCYDFL 342
Query: 317 ------------------------VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV 352
V+ +++ N+LI + K+G ++ AR +F+ ++D+
Sbjct: 343 QATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDI 402
Query: 353 VSWNSIISAHCKH---REALALFEQM-EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
SWN++IS + + + AL LF +M + VKPD IT VS+ SA + LG + +G R +
Sbjct: 403 FSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHD 462
Query: 409 LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII--TDGIGSEAAGPTQWGALLYSCYL 466
+ I P ++++Y + G +E A +I T I S P W A++
Sbjct: 463 YLNFS-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP--WNAIICGSAT 519
Query: 467 HG 468
HG
Sbjct: 520 HG 521
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 5/173 (2%)
Query: 100 AIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAF-PWNS 158
++ G + H + + N +T+ ++ +YA G +E A ++F Q +S PWN+
Sbjct: 453 SLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNA 512
Query: 159 LISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRA- 217
+I G A G A+ LY + ++P+ TF VL C GL+E+G + + ++++
Sbjct: 513 IICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELG-KTYFESMKSD 571
Query: 218 -GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH-RRDSVSWNSMLTAYVHHG 268
G D +VD+ K G + +A+++ +M + D + W +L+A HG
Sbjct: 572 HGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 200/419 (47%), Gaps = 51/419 (12%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLV 127
+ LK + E G + Y S+L Q + G Q+H ++ + + + L+
Sbjct: 299 KALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALI 358
Query: 128 RLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAI--ALYFQMVEEGVE 185
YA G +ED+ FD + RD + WN+L+SGYA D I +L+ QM++ G
Sbjct: 359 DFYAKCGNLEDSRLCFDYI--RDKNIVCWNALLSGYAN---KDGPICLSLFLQMLQMGFR 413
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG-------------------NDGL-- 224
P +TF LK C L +++H VR G+ ND L
Sbjct: 414 PTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLL 469
Query: 225 -----------GLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEA 273
LN + +Y + G ++ K+ + + + D+VSWN + A E
Sbjct: 470 LDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEV 529
Query: 274 MDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIRRGVEW-NLSIANSLII 329
++ F M+ +PD FVSI ++ + + + LG IHG + + + + N LI
Sbjct: 530 IELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLID 589
Query: 330 AYSKHGRLDTARWLFNLMPERDVVSWNSIISA---HCKHREALALFEQMEEAGVKPDKIT 386
Y K G + + +F E+++++W ++IS H +EAL F++ G KPD+++
Sbjct: 590 MYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVS 649
Query: 387 FVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
F+S+L+AC + G+V +G+ L+ M + Y ++P M+H+ C V+L R G +++A +I +
Sbjct: 650 FISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIRE 707
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 174/384 (45%), Gaps = 42/384 (10%)
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQM 179
+ V + L+ Y G A +F D + WN++I A+ A+ L+ M
Sbjct: 250 ISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS--WNAIICATAKSENPLKALKLFVSM 307
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
E G P+ T+ VL V + + LL G ++H ++ G + NAL+D Y KCG++
Sbjct: 308 PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNL 367
Query: 240 VKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV 299
+R F+ + ++ V WN++L+ Y + + + F QM+ G +P + ST L
Sbjct: 368 EDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSC 426
Query: 300 SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTA----RW------------- 342
+L Q+H ++R G E N + +SL+ +Y+K+ ++ A W
Sbjct: 427 CVTELQ-QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIV 485
Query: 343 ---------------LFNLMPERDVVSWNSIISAHCK---HREALALFEQMEEAGVKPDK 384
L + + + D VSWN I+A + H E + LF+ M ++ ++PDK
Sbjct: 486 AGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDK 545
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
TFVS+LS C+ L + G ++ L+T+ ++++YG+ G + +
Sbjct: 546 YTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFE 605
Query: 445 DGIGSEAAGPTQWGALLYSCYLHG 468
+ + W AL+ +HG
Sbjct: 606 E---TREKNLITWTALISCLGIHG 626
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 153/301 (50%), Gaps = 8/301 (2%)
Query: 101 IRHGSQVHRL-IPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSL 159
+R G+Q+H L + L + V + L+ LY +E A +F+ M + S WN +
Sbjct: 129 VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK--SLETWNHM 186
Query: 160 ISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGF 219
+S G + + + ++V G +F VLK + + L++ +++H A + G
Sbjct: 187 MSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGL 246
Query: 220 GNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQ 279
+ +N+L+ Y KCG+ A ++F D VSWN+++ A ++A+ F
Sbjct: 247 DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS 306
Query: 280 MVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGR 336
M G P+ +VS+ + + V + G QIHG +I+ G E + + N+LI Y+K G
Sbjct: 307 MPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGN 366
Query: 337 LDTARWLFNLMPERDVVSWNSIISAHCKHRE--ALALFEQMEEAGVKPDKITFVSLLSAC 394
L+ +R F+ + ++++V WN+++S + L+LF QM + G +P + TF + L +C
Sbjct: 367 LEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Query: 395 A 395
Sbjct: 427 C 427
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 112/227 (49%), Gaps = 10/227 (4%)
Query: 227 NALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCK 286
N ++ +Y K G + A K+F++M R+ VS+N+++ Y +G +A F +M G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 287 PDFVSISTILTGVSSMDL--GVQIHGWVIRRGVEW-NLSIANSLIIAYSKHGRLDTARWL 343
P+ ++S +L+ +S+D+ G Q+HG ++ G+ + + L+ Y + L+ A +
Sbjct: 113 PNQSTVSGLLS-CASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQV 171
Query: 344 FNLMPERDVVSWNSIISAHCKHR----EALALFEQMEEAGVKPDKITFVSLLSACAYLGL 399
F MP + + +WN ++S HR E + F ++ G + +F+ +L + +
Sbjct: 172 FEDMPFKSLETWNHMMSL-LGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKD 230
Query: 400 VNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDG 446
++ +L+ T+K + + +++ YG+ G A + D
Sbjct: 231 LDISKQLHCSATKK-GLDCEISVVNSLISAYGKCGNTHMAERMFQDA 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAG 379
+ N++I Y K G + A +F+ MPER+ VS+N+II + K+ +A +F +M G
Sbjct: 51 VCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFG 110
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHG-CMVNLYGRAGMVEK 438
P++ T LLS CA L V G +L+ L + KY + G C++ LYGR ++E
Sbjct: 111 YLPNQSTVSGLLS-CASLD-VRAGTQLHGL-SLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 439 AYSIITD 445
A + D
Sbjct: 168 AEQVFED 174
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 4/197 (2%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLI-PTVLLRKNVGVTSK 125
E+V++ + ++ IR D + S+L C + + GS +H LI T + V +
Sbjct: 527 EEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNV 586
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
L+ +Y G + +F++ R+ + W +LIS G +A+ + + + G +
Sbjct: 587 LIDMYGKCGSIRSVMKVFEE--TREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFK 644
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
PD +F +L C G+++ G + + G + VD+ + G++ +A +
Sbjct: 645 PDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHL 704
Query: 246 FNRM-HRRDSVSWNSML 261
M D+ W + L
Sbjct: 705 IREMPFPADAPVWRTFL 721
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 238/525 (45%), Gaps = 79/525 (15%)
Query: 69 VLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVR 128
VL+ I G + D LL + Q+H + N +++ L+R
Sbjct: 39 VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMR 98
Query: 129 LYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDL 188
Y + +EDAH +FD+M D WNSL+SGY Q G + + I L+ ++ V P+
Sbjct: 99 FYKTSDSLEDAHKVFDEMP--DPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNE 156
Query: 189 FTFPRVLKV-----------CAGLGLLEVGEEVHRHAV---------RAGFGNDG----- 223
F+F L C L+++G E V + GF +D
Sbjct: 157 FSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQ 216
Query: 224 ------------------------LGL--------------NALVDMYPKCGHIVKARKI 245
LGL N L+D + K G A ++
Sbjct: 217 HMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQV 276
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL- 304
+ M +S SWN++LT YV+ EA + F +M G + D S+S +L V+++ +
Sbjct: 277 LSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVV 336
Query: 305 --GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAH 362
G IH + G++ + +A++LI YSK G L A +F MP ++++ WN +IS +
Sbjct: 337 PWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGY 396
Query: 363 CKHR---EALALFEQM-EEAGVKPDKITFVSLLSACAYLGLVNDGVRLY-ALMTEKYKIK 417
++ EA+ LF Q+ +E +KPD+ TF++LL+ C++ + + + Y +M +Y+IK
Sbjct: 397 ARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIK 456
Query: 418 PIMEHHGCMVNLYGRAGMVEKAYSIITD-GIGSEAAGPTQWGALLYSCYLHGSVAIGEIA 476
P +EH ++ G+ G V +A +I + G G + W ALL +C + +
Sbjct: 457 PSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVA---WRALLGACSARKDLKAAKTV 513
Query: 477 ANKLFDL--EPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
A K+ +L +E+ + ++ +Y R ++ ++R ++ + G+
Sbjct: 514 AAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGV 558
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 14/268 (5%)
Query: 151 ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
AS+ W++++ A+ G + +++ +G +PD +L+V G + + ++
Sbjct: 19 ASSNSWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQL 77
Query: 211 HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
H + + GF ++ N+L+ Y + A K+F+ M D +SWNS+++ YV G
Sbjct: 78 HGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRF 137
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD---LGVQIHGWVIRRGVE-WNLSIANS 326
E + F ++ P+ S + L + + LG IH +++ G+E N+ + N
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNC 197
Query: 327 LIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHREALAL----FEQMEEAGVKP 382
LI Y K G +D A +F M E+D VSWN+I+ A C L L F QM P
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV-ASCSRNGKLELGLWFFHQMP----NP 252
Query: 383 DKITFVSLLSACAYLGLVNDGVRLYALM 410
D +T+ L+ A G N+ ++ + M
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDM 280
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 183/342 (53%), Gaps = 35/342 (10%)
Query: 204 LEVGEEVHRHAVRAGFGNDG-LGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLT 262
L VG VH + GF + L L+ Y K G + ARK+F+ M R SV+WN+M+
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 263 AYVHHGLE-----VEAMDTFCQMVL--EGCKPDFVSISTILTGVSS---MDLGVQIHGWV 312
Y H + +AM F + G +P ++ +L+ +S +++G +HG++
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 313 IRRGV--EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSI---ISAHCKHRE 367
+ G E ++ I +L+ YSK G L+ A +F LM ++V +W S+ ++ + + E
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
L +M E+G+KP++ITF SLLSA ++GLV +G+ L+ M ++ + P++EH+GC+V
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 428 NLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLY-----SCYLHGSVAIGEIAANKLFD 482
+L G+AG +++AY I A P + A+L +C ++G +GE L +
Sbjct: 367 DLLGKAGRIQEAYQFIL-------AMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLE 419
Query: 483 LEPDNE-------HNFALLMKIYENAGRLEDMERVRMMLVDR 517
+E ++E ++ L + + G+ ++E++R + +R
Sbjct: 420 IEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKER 461
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 47/312 (15%)
Query: 101 IRHGSQVHRLIPTV-LLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSL 159
+R G VH ++ + L ++ + + L+ YA G + A +FD+M +R ++ WN++
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPER--TSVTWNAM 184
Query: 160 ISGYAQ---LGLYD--DAIALY--FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHR 212
I GY G ++ A+ L+ F GV P T VL + GLLE+G VH
Sbjct: 185 IGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHG 244
Query: 213 HAVRAGFGN--DGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLE 270
+ + GF D ALVDMY KCG + A +F M ++ +W SM T +G
Sbjct: 245 YIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRG 304
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQI-HGWVIRRGVEWNLSIANS 326
E + +M G KP+ ++ +++L+ + L G+++ R GV +
Sbjct: 305 NETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGC 364
Query: 327 LIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHREALALFEQMEEAGVKPDKIT 386
++ K GR+ A MP +KPD I
Sbjct: 365 IVDLLGKAGRIQEAYQFILAMP-------------------------------IKPDAIL 393
Query: 387 FVSLLSACAYLG 398
SL +AC+ G
Sbjct: 394 LRSLCNACSIYG 405
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGV--TSKLVRLYASFGYME 137
G+R +L ++ + GS VH I + V V + LV +Y+ G +
Sbjct: 215 GVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLN 274
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
+A +F+ M ++ F W S+ +G A G ++ L +M E G++P+ TF +L
Sbjct: 275 NAFSVFELMKVKNV--FTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
Query: 198 CAGLGLLEVGEEVHRHAVRAGFGNDGL--GLNALVDMYPKCGHIVKARKIFNRMH-RRDS 254
+GL+E G E+ + +++ FG + +VD+ K G I +A + M + D+
Sbjct: 333 YRHIGLVEEGIELFK-SMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDA 391
Query: 255 VSWNSMLTAYVHHG------------LEVEAMDTFCQMVLEGCKPDFVSISTIL 296
+ S+ A +G LE+E D ++ C+ D+V++S +L
Sbjct: 392 ILLRSLCNACSIYGETVMGEEIGKALLEIEREDE--KLSGSECE-DYVALSNVL 442
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 177/336 (52%), Gaps = 46/336 (13%)
Query: 130 YASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLF 189
+A +E+A FD+M ++ S WN+++SGYAQ G +DA+ L+ M+ GV P+
Sbjct: 208 FAKVKDLENARKYFDRMPEK--SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNET 265
Query: 190 TFPRVLKVCA--------------------------GLGLLEVGEEVHR-HAVRAGFGND 222
T+ V+ C+ LL++ + + R F
Sbjct: 266 TWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL 325
Query: 223 G-----LGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTF 277
G + NA++ Y + G + AR++F+ M +R+ VSWNS++ Y H+G A++ F
Sbjct: 326 GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 278 CQMVLEG-CKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSK 333
M+ G KPD V++ ++L+ ++ ++LG I ++ + ++ N S SLI Y++
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYAR 445
Query: 334 HGRLDTARWLFNLMPERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSL 390
G L A+ +F+ M ERDVVS+N++ +A + E L L +M++ G++PD++T+ S+
Sbjct: 446 GGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSV 505
Query: 391 LSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCM 426
L+AC GL+ +G R++ K P+ +H+ CM
Sbjct: 506 LTACNRAGLLKEGQRIF-----KSIRNPLADHYACM 536
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 185/424 (43%), Gaps = 86/424 (20%)
Query: 61 TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
+K VL+ E GI D + ++++ A R G L+ + K+
Sbjct: 82 SKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS-----AGRFGILFQALVEKLGFFKDP 136
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
V + ++ +Y +E A +FDQ+SQR S WN +ISGY + G ++A L+ M
Sbjct: 137 YVRNVIMDMYVKHESVESARKVFDQISQRKGS--DWNVMISGYWKWGNKEEACKLFDMMP 194
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
E ND + ++ + K +
Sbjct: 195 E---------------------------------------NDVVSWTVMITGFAKVKDLE 215
Query: 241 KARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
ARK F+RM + VSWN+ML+ Y +G +A+ F M+ G +P+ + +++ S
Sbjct: 216 NARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
Query: 301 SM--------------DLGVQIHGWV----------------IRR-----GVEWNLSIAN 325
+ V+++ +V RR G + NL N
Sbjct: 276 FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWN 335
Query: 326 SLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHRE---ALALFEQMEEAG-VK 381
++I Y++ G + +AR LF+ MP+R+VVSWNS+I+ + + + A+ FE M + G K
Sbjct: 336 AMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSK 395
Query: 382 PDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYS 441
PD++T +S+LSAC ++ + G + + K +IK + ++ +Y R G + +A
Sbjct: 396 PDEVTMISVLSACGHMADLELGDCIVDYI-RKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454
Query: 442 IITD 445
+ +
Sbjct: 455 VFDE 458
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 160/338 (47%), Gaps = 53/338 (15%)
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVH 211
+ F NS+ ++++ + +D + LY Q G+ PD F+FP V+K G+L
Sbjct: 70 NVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL-----FQ 124
Query: 212 RHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEV 271
+ GF D N ++DMY K + ARK+F+++ +R WN M++ Y G +
Sbjct: 125 ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKE 184
Query: 272 EAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAY 331
EA F M + D VS + ++TG +
Sbjct: 185 EACKLFDMMP----ENDVVSWTVMITG--------------------------------F 208
Query: 332 SKHGRLDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFV 388
+K L+ AR F+ MPE+ VVSWN+++S + ++ +AL LF M GV+P++ T+V
Sbjct: 209 AKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWV 268
Query: 389 SLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIG 448
++SAC++ + L L+ EK +++ +++++ + ++ A I + +G
Sbjct: 269 IVISACSFRADPSLTRSLVKLIDEK-RVRLNCFVKTALLDMHAKCRDIQSARRIFNE-LG 326
Query: 449 SEAAGPTQWGALLYSCYLHGSVAIGEI-AANKLFDLEP 485
TQ + ++ + G IG++ +A +LFD P
Sbjct: 327 ------TQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 123/228 (53%), Gaps = 6/228 (2%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
EK +R++ + +LL+ + + I+ ++ + T ++N+ + ++ Y G M
Sbjct: 292 EKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT---QRNLVTWNAMISGYTRIGDMS 348
Query: 138 DAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG-VEPDLFTFPRVLK 196
A LFD M +R+ + WNSLI+GYA G AI + M++ G +PD T VL
Sbjct: 349 SARQLFDTMPKRNVVS--WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLS 406
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C + LE+G+ + + + + G +L+ MY + G++ +A+++F+ M RD VS
Sbjct: 407 ACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVS 466
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL 304
+N++ TA+ +G VE ++ +M EG +PD V+ +++LT + L
Sbjct: 467 YNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGL 514
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 90 SLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR 149
S+L C + G + I ++ N L+ +YA G + +A +FD+M +R
Sbjct: 403 SVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER 462
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
D ++ N+L + +A G + + L +M +EG+EPD T+ VL C GLL+ G+
Sbjct: 463 DVVSY--NTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQR 520
Query: 210 VHR 212
+ +
Sbjct: 521 IFK 523
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 212/433 (48%), Gaps = 58/433 (13%)
Query: 136 MEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
+ +AH +FD++ + D ++I + + + +A + +++ G+ P+ FTF V+
Sbjct: 43 IRNAHKVFDEIPELDV--ISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVI 100
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARK----------- 244
+++G+++H +A++ G ++ +A+++ Y K + AR+
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVV 160
Query: 245 --------------------IFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG 284
+F M R V+WN+++ + G EA++TF M+ EG
Sbjct: 161 SITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 285 C----KPDFVSISTILTGVSSMDLGVQIHGWVIR-RGVEWNLSIANSLIIAYSKHGRLDT 339
+ F T ++ ++S G IH I+ G +N+ + NSLI YSK G ++
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 340 ARWLFNLMPE--RDVVSWNSIISAHC---KHREALALFEQM-EEAGVKPDKITFVSLLSA 393
+ FN + E R++VSWNS+I + + EA+A+FE+M ++ ++P+ +T + +L A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 394 CAYLGLVNDGVRLYALMTEKYKIKPIME--HHGCMVNLYGRAGMVEKAYSIITD-----G 446
C + GL+ +G + Y ++E H+ CMV++ R+G ++A +I G
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 447 IGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLED 506
IG W ALL C +H + + ++AA+K+ +L+P + ++ +L Y ++
Sbjct: 401 IGF-------WKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQN 453
Query: 507 MERVRMMLVDRGL 519
+ +R + + GL
Sbjct: 454 VSLIRRKMKETGL 466
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 117 RKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALY 176
R NV V + L+ Y+ G MED+ F+++ + + WNS+I GYA G ++A+A++
Sbjct: 259 RFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMF 318
Query: 177 FQMVEE-GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLN---ALVDM 232
+MV++ + P+ T VL C GL++ G AV + L L +VDM
Sbjct: 319 EKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDM 378
Query: 233 YPKCGHIVKARKIFNRM 249
+ G +A ++ M
Sbjct: 379 LSRSGRFKEAEELIKSM 395
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 212/426 (49%), Gaps = 57/426 (13%)
Query: 148 QRDASAFPWNSLISGYAQLG--------LYDDAIALYFQMVEEGVEP--DLFTFPRVLKV 197
Q F +N L+ Y+ LG LYD L+F P D FT+ +LK
Sbjct: 72 QNSGKLFLFNPLLRCYS-LGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKA 130
Query: 198 CAG--LGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV 255
+ L +G +H ++ GF + ALV MY G+++ A K+F+ M R+ V
Sbjct: 131 SSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPV 190
Query: 256 SWNSMLTAYVHHG--------LEV-----------------------EAMDTFCQMV-LE 283
+WN M+T + G LE EA+ F +MV +
Sbjct: 191 TWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACD 250
Query: 284 GCKPDFVSISTILTGVSSM-DLGV--QIHGWVIRRG-VEWNLSIANSLIIAYSKHGRLDT 339
KP+ ++I IL V ++ DL + +H +V +RG V ++ + NSLI AY+K G + +
Sbjct: 251 AIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQS 310
Query: 340 ARWLFNLMP--ERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSAC 394
A F +P +++VSW ++ISA H +EA+++F+ ME G+KP+++T +S+L+AC
Sbjct: 311 AFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNAC 370
Query: 395 AYLGLVNDG-VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAG 453
++ GL + + + M +YKI P ++H+GC+V++ R G +E+A I + E A
Sbjct: 371 SHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKA- 429
Query: 454 PTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMM 513
W LL +C ++ + E KL +LE + ++ L+ I+ GR D +R R
Sbjct: 430 -VVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQ 488
Query: 514 LVDRGL 519
+ RG+
Sbjct: 489 MDVRGV 494
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 5/186 (2%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQ 178
++ VT+ L+ YA G ++ A F ++ + W ++IS +A G+ +A++++
Sbjct: 291 DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKD 350
Query: 179 MVEEGVEPDLFTFPRVLKVCA--GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
M G++P+ T VL C+ GL E E + D LVDM +
Sbjct: 351 MERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRK 410
Query: 237 GHIVKARKIFNRMH-RRDSVSWNSMLTA-YVHHGLEVEAMDTFCQMVLEGCK-PDFVSIS 293
G + +A KI + +V W +L A V+ E+ T M LE D+V +S
Sbjct: 411 GRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMS 470
Query: 294 TILTGV 299
I G
Sbjct: 471 NIFCGT 476
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 170/320 (53%), Gaps = 17/320 (5%)
Query: 207 GEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM-HRRDSVSWNSMLTAYV 265
G ++H + GF +LV Y G + AR++F+ +++ V W +M++AY
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRG--VEWN 320
+ VEA++ F +M E + D V ++ L+ + + +G +I+ I+R + +
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 321 LSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHC---KHREALALFEQM-- 375
L++ NSL+ Y K G + AR LF+ +DV ++ S+I + + +E+L LF++M
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 376 ----EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYG 431
++ + P+ +TF+ +L AC++ GLV +G R + M Y +KP H GCMV+L+
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 432 RAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNF 491
R+G ++ A+ I W LL +C LHG+V +GE ++F+L+ D+ ++
Sbjct: 324 RSGHLKDAHEFINQ--MPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDY 381
Query: 492 ALLMKIYENAGRLEDMERVR 511
L IY + G ++ ++R
Sbjct: 382 VALSNIYASKGMWDEKSKMR 401
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 38/340 (11%)
Query: 104 GSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGY 163
G Q+H L+ + + + + LV Y+S G ++ A +FD+ ++ W ++IS Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVL-WTAMISAY 142
Query: 164 AQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAG--FGN 221
+ +AI L+ +M E +E D L CA LG +++GEE++ +++
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 222 DGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMV 281
D N+L++MY K G KARK+F+ R+D ++ SM+ Y +G E+++ F +M
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM- 261
Query: 282 LEGCKPDFVSISTILTGVSSMDLGVQI---HGWVIRRGVEWNLSIANSLIIAYSKHGRLD 338
K S T++T +GV + H ++ G S+I+ Y
Sbjct: 262 ----KTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRH----FKSMIMDY------- 306
Query: 339 TARWLFNLMPERDVVSWNSIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
NL P + ++ C+ E + + +KP+ + + +LL AC+ G
Sbjct: 307 ------NLKPRE--AHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHG 358
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHG---CMVNLYGRAGM 435
V G + + E + +H G + N+Y GM
Sbjct: 359 NVELGEEVQRRIFELDR-----DHVGDYVALSNIYASKGM 393
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 160/303 (52%), Gaps = 16/303 (5%)
Query: 226 LNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMV-LEG 284
+N +++ K G A+K+ ++ ++WN M+ YV + EA+ M+
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 285 CKPDFVSISTILTGVSSM-DL--GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTAR 341
KP+ S ++ L + + DL +H +I G+E N ++++L+ Y+K G + T+R
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 342 WLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
+F + DV WN++I+ H EA+ +F +ME V PD ITF+ LL+ C++ G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP--TQ 456
L+ +G + LM+ ++ I+P +EH+G MV+L GRAG V++AY +I S P
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIE----SMPIEPDVVI 336
Query: 457 WGALLYSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVD 516
W +LL S + + +GEIA +L ++ LL IY + + E ++VR ++
Sbjct: 337 WRSLLSSSRTYKNPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSK 393
Query: 517 RGL 519
G+
Sbjct: 394 EGI 396
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 6/218 (2%)
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVE-EGVEPDLFTFPRVLKVCAGLGLLEVGE 208
D + WN +I GY + Y++A+ M+ ++P+ F+F L CA LG L +
Sbjct: 126 DQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAK 185
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHG 268
VH + +G + + +ALVD+Y KCG I +R++F + R D WN+M+T + HG
Sbjct: 186 WVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHG 245
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRR-GVEWNLSIA 324
L EA+ F +M E PD ++ +LT S L G + G + RR ++ L
Sbjct: 246 LATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY 305
Query: 325 NSLIIAYSKHGRLDTARWLFNLMP-ERDVVSWNSIISA 361
+++ + GR+ A L MP E DVV W S++S+
Sbjct: 306 GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 13/236 (5%)
Query: 88 YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMS 147
+AS L C R + H VH L+ + N ++S LV +YA G + + ++F +
Sbjct: 168 FASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK 227
Query: 148 QRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVG 207
+ D S WN++I+G+A GL +AI ++ +M E V PD TF +L C+ GLLE G
Sbjct: 228 RNDVSI--WNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEG 285
Query: 208 EEV-----HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH-RRDSVSWNSML 261
+E R +++ + G A+VD+ + G + +A ++ M D V W S+L
Sbjct: 286 KEYFGLMSRRFSIQPKLEHYG----AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGV 317
++ + E + Q + + D+V +S I + + ++ + + G+
Sbjct: 342 SSSRTYK-NPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 176/372 (47%), Gaps = 26/372 (6%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGL-YDDAIALYFQMV 180
+ L+ +A+ G +A ++F +M + + +N +++ + ++G ++ +L +M
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
+G+ PD +T+ ++ C L + +V AGF D + NAL+D+Y K
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 241 KARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
+A K+ N M V++NS+++AY G+ EAM+ QM +G KPD + +T+L
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 297 TG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN------LM 347
+G ++ + I + G + N+ N+ I Y G+ +F+ L
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 348 PERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGV 404
P D+V+WN++++ ++ E +F++M+ AG P++ TF +L+SA + G +
Sbjct: 452 P--DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 405 RLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSC 464
+Y M + + P + + ++ R GM E++ ++ + G + L Y
Sbjct: 510 TVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAE----MEDGRCKPNELTYCS 564
Query: 465 YLHGSVAIGEIA 476
LH EI
Sbjct: 565 LLHAYANGKEIG 576
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 182/387 (47%), Gaps = 17/387 (4%)
Query: 73 IEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS 132
+E GI D Y +L+ C R + +QV + + + L+ +Y
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 133 FGYMEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFT 190
++A + ++M + S +NSLIS YA+ G+ D+A+ L QM E+G +PD+FT
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 191 FPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH 250
+ +L G +E + AG + NA + MY G + KIF+ ++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 251 ----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMD 303
D V+WN++L + +G++ E F +M G P+ + +T+++ S S +
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 304 LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE----RDVVSWNSII 359
+ ++ ++ GV +LS N+++ A ++ G + + + M + + +++ S++
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 360 SAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKI 416
A+ +E +L E++ ++P + +L+ C+ L+ + R ++ + E+
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER-GF 625
Query: 417 KPIMEHHGCMVNLYGRAGMVEKAYSII 443
P + MV++YGR MV KA ++
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVL 652
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/421 (20%), Positives = 174/421 (41%), Gaps = 71/421 (16%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
EKG + D Y +LL R+ + + + + N+ + +++Y + G
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 138 DAHDLFDQMSQRDASA--FPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
+ +FD+++ S WN+L++ + Q G+ + ++ +M G P+ TF ++
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH----R 251
+ G E V+R + AG D N ++ + G ++ K+ M +
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 252 RDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC-KPDFVSISTILTGVSSMDL---GVQ 307
+ +++ S+L AY + G E+ M + + V G +P V + T++ S DL +
Sbjct: 557 PNELTYCSLLHAYAN-GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 308 IHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----------------- 350
+ RG +++ NS++ Y + + A + + M ER
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHS 675
Query: 351 ----------------------DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKI 385
D++S+N++I A+C++ R+A +F +M +G+ PD I
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735
Query: 386 TFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
T+ + + + A + + + + +Y IK HGC N + Y+ I D
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVV-----RYMIK-----HGCRPN--------QNTYNSIVD 777
Query: 446 G 446
G
Sbjct: 778 G 778
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 117/286 (40%), Gaps = 9/286 (3%)
Query: 65 AIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTS 124
+ EQ + ++ G+ D Y ++L R +V + + N
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 125 KLVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
L+ YA+ + H L +++ + A +L+ ++ L +A + ++ E
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 183 GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKA 242
G PD+ T ++ + ++ V + GF N+L+ M+ + K+
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 243 ----RKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL-- 296
R+I + + D +S+N+++ AY + +A F +M G PD ++ +T +
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 297 -TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTAR 341
S + + + ++I+ G N + NS++ Y K R D A+
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 169/372 (45%), Gaps = 24/372 (6%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
L + CY++ V R P V + NV + ++ G +++AH L M +
Sbjct: 220 LSKDCYKTAT---AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 151 AS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
+ ++++++GY + G D L M +G++P+ + + ++ + + L E
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAY 264
E +R G D + L+D + K G I A K F MH R D +++ ++++ +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 265 VHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNL 321
G VEA F +M +G +PD V+ + ++ G M ++H +I+ G N+
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 322 SIANSLIIAYSKHGRLDTAR------WLFNLMPERDVVSWNSIISAHCKH---REALALF 372
+LI K G LD+A W L P ++ ++NSI++ CK EA+ L
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP--NIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
+ E AG+ D +T+ +L+ A G ++ + M K ++P + ++N +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCL 573
Query: 433 AGMVEKAYSIIT 444
GM+E ++
Sbjct: 574 HGMLEDGEKLLN 585
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 171/385 (44%), Gaps = 63/385 (16%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLL----ETCYRSQAIRHGSQVHR--LIPTVLLRKN 119
+++V K IE KG++ + IY S++ C ++A S++ R ++P +
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV---- 352
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYF 177
V + L+ + G + A F +M RD + + ++ISG+ Q+G +A L+
Sbjct: 353 --VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGN---------DGL---- 224
+M +G+EPD TF ++ G ++ VH H ++AG DGL
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 225 ---------------GL-------NALVDMYPKCGHIVKARKIFNRMH----RRDSVSWN 258
GL N++V+ K G+I +A K+ D+V++
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRR 315
+++ AY G +A + +M+ +G +P V+ + ++ G ++ G ++ W++ +
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHR---EA 368
G+ N + NSL+ Y L A ++ M R D ++ +++ HCK R EA
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 369 LALFEQMEEAGVKPDKITFVSLLSA 393
LF++M+ G T+ L+
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKG 675
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 169/372 (45%), Gaps = 24/372 (6%)
Query: 91 LLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD 150
L + CY++ V R P V + NV + ++ G +++AH L M +
Sbjct: 220 LSKDCYKTAT---AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 151 AS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGE 208
+ ++++++GY + G D L M +G++P+ + + ++ + + L E
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAY 264
E +R G D + L+D + K G I A K F MH R D +++ ++++ +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 265 VHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNL 321
G VEA F +M +G +PD V+ + ++ G M ++H +I+ G N+
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 322 SIANSLIIAYSKHGRLDTAR------WLFNLMPERDVVSWNSIISAHCKH---REALALF 372
+LI K G LD+A W L P ++ ++NSI++ CK EA+ L
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP--NIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
+ E AG+ D +T+ +L+ A G ++ + M K ++P + ++N +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCL 573
Query: 433 AGMVEKAYSIIT 444
GM+E ++
Sbjct: 574 HGMLEDGEKLLN 585
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 171/385 (44%), Gaps = 63/385 (16%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLL----ETCYRSQAIRHGSQVHR--LIPTVLLRKN 119
+++V K IE KG++ + IY S++ C ++A S++ R ++P +
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV---- 352
Query: 120 VGVTSKLVRLYASFGYMEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYF 177
V + L+ + G + A F +M RD + + ++ISG+ Q+G +A L+
Sbjct: 353 --VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGN---------DGL---- 224
+M +G+EPD TF ++ G ++ VH H ++AG DGL
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 225 ---------------GL-------NALVDMYPKCGHIVKARKIFNRMH----RRDSVSWN 258
GL N++V+ K G+I +A K+ D+V++
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 259 SMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRR 315
+++ AY G +A + +M+ +G +P V+ + ++ G ++ G ++ W++ +
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 316 GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHR---EA 368
G+ N + NSL+ Y L A ++ M R D ++ +++ HCK R EA
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 369 LALFEQMEEAGVKPDKITFVSLLSA 393
LF++M+ G T+ L+
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKG 675
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 165/332 (49%), Gaps = 20/332 (6%)
Query: 139 AHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A +L ++M + +A ++++I + DDA+ L+ +M +G+ PD+FT+ ++
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR---- 252
G + + + + N+L+D + K G +++A K+F+ M +R
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 253 DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIH 309
+ V++NS++ + H EA F MV + C PD V+ +T++ G G+++
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH 365
+ RRG+ N +LI + + D A+ +F M +++++N+++ CK+
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 366 ---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEH 422
+A+ +FE ++++ ++PD T+ + G V DG L+ ++ K +KP +
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIA 522
Query: 423 HGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP 454
+ M++ + + G+ E+AY++ I + GP
Sbjct: 523 YNTMISGFCKKGLKEEAYTLF---IKMKEDGP 551
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 158/334 (47%), Gaps = 17/334 (5%)
Query: 77 IEKG-IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGY 135
+EKG I D IY++++++ + + + + + +R +V S L+ ++G
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 136 MEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
DA L M +R + + +NSLI +A+ G +A L+ +M++ ++P++ T+
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
++ L+ +++ V D + N L++ + K +V ++F M RR
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 254 SVSWNSMLTAYVHHGLEVEAMDT----FCQMVLEGCKPDFVSISTILTGV---SSMDLGV 306
V T +H + D F QMV +G P+ ++ +T+L G+ ++ +
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAH 362
+ ++ + +E ++ N + K G+++ LF + + DV+++N++IS
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 363 CKH---REALALFEQMEEAGVKPDKITFVSLLSA 393
CK EA LF +M+E G PD T+ +L+ A
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 152/325 (46%), Gaps = 46/325 (14%)
Query: 136 MEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
+++A DLF +M S+ S ++ L+S A++ +D I+ +M GV +L+T+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM---- 249
++ L + ++ G+G + LN+L++ + I +A + ++M
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 250 HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIH 309
++ D+V++ +++ H EA+ +MV++GC+PD V+ ++ G+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL---------- 215
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP----ERDVVSWNSIISAHCKH 365
K G D A L N M E DVV ++++I + CK+
Sbjct: 216 ----------------------CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 366 R---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEH 422
R +AL LF +M+ G++PD T+ SL+S G +D RL + M E+ KI P +
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVT 312
Query: 423 HGCMVNLYGRAGMVEKAYSIITDGI 447
+++ + + G + +A + + I
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMI 337
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 138/282 (48%), Gaps = 26/282 (9%)
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE-- 209
S NSL++G+ +A+AL QMVE G +PD TF ++ GL + +
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH-----GLFQHNKASE 188
Query: 210 ----VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR----RDSVSWNSML 261
V R V+ G D + A+++ K G A + N+M + D V +++++
Sbjct: 189 AVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVE 318
+ + +A++ F +M +G +PD + S++++ + + ++ ++ R +
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 319 WNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALAL 371
N+ NSLI A++K G+L A LF+ M +R ++V++NS+I+ C H EA +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 372 FEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
F M PD +T+ +L++ V DG+ L+ M+ +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 138/296 (46%), Gaps = 27/296 (9%)
Query: 136 MEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
+ +A L DQM + + +L+ G Q +A+AL +MV +G +PDL T+
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH--- 250
V+ G ++ + + D + + ++D K H+ A +F M
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 251 -RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQ-- 307
R D +++S+++ ++G +A M+ P+ V+ ++++ + ++
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 308 -IHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAH 362
+ +I+R ++ N+ NSLI + H RLD A+ +F LM + DVV++N++I+
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 363 CKHR---EALALFEQMEEAGVKPDKITFVSLL------SAC-----AYLGLVNDGV 404
CK + + + LF M G+ + +T+ +L+ S C + +V+DGV
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 164/317 (51%), Gaps = 17/317 (5%)
Query: 139 AHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A DLF +M +R+ AS ++ +I + G +DDA++L+ +M +G++ D+ T+ ++
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR---- 252
G + G ++ R + D + +AL+D++ K G +++A++++N M R
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 253 DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIH 309
D++++NS++ + EA F MV +GC+PD V+ S ++ +D G+++
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH 365
+ +G+ N N+L++ + + G+L+ A+ LF M R VV++ ++ C +
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 366 RE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEH 422
E AL +FE+M+++ + + ++ V+D L+ +++K +KP +
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK-GVKPDVVT 527
Query: 423 HGCMVNLYGRAGMVEKA 439
+ M+ + G + +A
Sbjct: 528 YNVMIGGLCKKGSLSEA 544
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 182/389 (46%), Gaps = 29/389 (7%)
Query: 153 AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHR 212
+++L++G+ G +A+AL +MVE PDL T ++ G + +
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 199
Query: 213 HAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD----SVSWNSMLTAYVHHG 268
V GF D + +++ K G+ A +F +M R+ V ++ ++ + G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIAN 325
+A+ F +M ++G K D V+ S+++ G+ + D G ++ +I R + ++ +
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 326 SLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHR---EALALFEQMEEA 378
+LI + K G+L A+ L+N M R D +++NS+I CK EA +F+ M
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 379 GVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEK 438
G +PD +T+ L+++ V+DG+RL+ ++ K I P + +V + ++G +
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI-PNTITYNTLVLGFCQSGKLNA 438
Query: 439 AYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDL-EPDNEHNFALLMKI 497
A + + + S P+ + Y L G GE+ NK ++ E + L + I
Sbjct: 439 AKELFQEMV-SRGVPPS---VVTYGILLDGLCDNGEL--NKALEIFEKMQKSRMTLGIGI 492
Query: 498 YE-------NAGRLEDMERVRMMLVDRGL 519
Y NA +++D + L D+G+
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 158/379 (41%), Gaps = 51/379 (13%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+ + L I+ +E G + D Y +L +S + R + ++ +V S
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 126 LVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
++ G +DA LF++M + A ++SLI G G +DD + +M+
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+ PD+ TF ++ V G L +E++ + G D + N+L+D + K + +A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 244 KIFNRMHRR---------------------------------------DSVSWNSMLTAY 264
++F+ M + +++++N+++ +
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 265 VHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNL 321
G A + F +MV G P V+ +L G+ ++ ++I + + + +
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 322 SIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALFEQ 374
I N +I ++D A LF + ++ DVV++N +I CK EA LF +
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 375 MEEAGVKPDKITFVSLLSA 393
M+E G PD T+ L+ A
Sbjct: 551 MKEDGCTPDDFTYNILIRA 569
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 174/408 (42%), Gaps = 66/408 (16%)
Query: 136 MEDAHDLFDQMSQRDASAFP--WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
+ DA DLF+ M Q P +N L S A+ YD + M G+E D++T
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT--- 107
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM---- 249
+ +++ Y + ++ A + R
Sbjct: 108 --------------------------------MTIMINCYCRKKKLLFAFSVLGRAWKLG 135
Query: 250 HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIH 309
+ D++++++++ + G EA+ +MV +PD V++ST++ G+ + V
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL-CLKGRVSEA 194
Query: 310 GWVIRRGVEWNLS----IANSLIIAYSKHGRLDTARWLFNLMPERD----VVSWNSIISA 361
+I R VE+ ++ K G A LF M ER+ VV ++ +I +
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 362 HCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKP 418
CK +AL+LF +ME G+K D +T+ SL+ G +DG ++ M + I P
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIP 313
Query: 419 IMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI-AA 477
+ +++++ + G + +A + + I A T + Y+ + G + A
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT----ITYNSLIDGFCKENCLHEA 369
Query: 478 NKLFDL------EPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
N++FDL EPD +++L+ Y A R++D R+ + +GL
Sbjct: 370 NQMFDLMVSKGCEPD-IVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 162/334 (48%), Gaps = 14/334 (4%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALY 176
+V S L+ + + DA DL +M + +N++I G ++GL +DA+ L+
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
+M +GV D T+ ++ G + R V + + A++D++ K
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257
Query: 237 GHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
G +A K++ M RR D ++NS++ HG EA MV +GC PD V+
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Query: 293 STILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE 349
+T++ G +D G ++ + +RG+ + N++I Y + GR D A+ +F+ M
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Query: 350 R-DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVR 405
R ++ +++ ++ C + +AL LFE M+++ ++ D T+ ++ +G V D
Sbjct: 378 RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 406 LYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
L+ ++ K +KP + + M++ + R +K+
Sbjct: 438 LFRSLSCK-GLKPDVVSYTTMISGFCRKRQWDKS 470
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 152/344 (44%), Gaps = 24/344 (6%)
Query: 170 DDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNAL 229
++ I L+ +M++ P + F +VL A ++ + H G G+D N +
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 230 VDMYPKCGHIVKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
++ +C V A + +M + D V+ +S++ + +A+D +M G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 286 KPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW 342
+PD V +TI+ G + L V++ + R GV + NSL+ GR A
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 343 LFNLMPERD----VVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACA 395
L M RD V+++ ++I K EA+ L+E+M V PD T+ SL++
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 396 YLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPT 455
G V++ ++ LM K + ++ ++ ++N + ++ V++ + + G T
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNT-LINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 456 QWGALLYSCYLHGSVAIGE-IAANKLF---DLEPDNEHNFALLM 495
+ Y+ + G G AA ++F D P N +++L+
Sbjct: 350 ----ITYNTIIQGYFQAGRPDAAQEIFSRMDSRP-NIRTYSILL 388
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 138/316 (43%), Gaps = 48/316 (15%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRK---NVGVTSKLVRLYASFGYM 136
G+R D Y SL+ S S RL+ +++R NV + ++ ++ G
Sbjct: 204 GVRADAVTYNSLVAGLCCSG---RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 137 EDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRV 194
+A L+++M++R D F +NSLI+G G D+A + MV +G PD+ T+ +
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
+ ++ G ++ R + G D + N ++ Y + G A++IF+RM R +
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPN 380
Query: 255 VSWNSMLTAYVHHGLEVE-AMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVI 313
+ S+L + VE A+ F M
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQ-------------------------------- 408
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHRE-- 367
+ +E +++ N +I K G ++ A LF + + DVVS+ ++IS C+ R+
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWD 468
Query: 368 -ALALFEQMEEAGVKP 382
+ L+ +M+E G+ P
Sbjct: 469 KSDLLYRKMQEDGLLP 484
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 166/342 (48%), Gaps = 19/342 (5%)
Query: 68 QVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLV 127
+L +EA+ I D I+ +++++ + + + + + + T +R NV S L+
Sbjct: 171 NLLNKMEAA---KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 128 RLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVE 185
S+G DA L M ++ + + +N+LI + + G + +A L+ M++ ++
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 186 PDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKI 245
PD+FT+ ++ L+ +++ V D N L+ + K + ++
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 246 FNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS 301
F M R D+V++ +++ H G A F QMV +G PD ++ S +L G+ +
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 302 ---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVS 354
++ +++ ++ + ++ ++ I ++I K G++D LF + + +VV+
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 355 WNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSA 393
+N++IS C R EA AL ++M+E G PD T+ +L+ A
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 169/363 (46%), Gaps = 29/363 (7%)
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
MV+ P +F F ++L A + ++ + R G ++ N L++ + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 239 IVKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSIST 294
I A + +M + V+ +S+L Y H +A+ QMV G +PD ++ +T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 295 ILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP--- 348
++ G+ + V + +++RG + NL ++ K G +D A L N M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 349 -ERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGV 404
E DVV +N+II + CK+R +AL LF++ME G++P+ +T+ SL+S G +D
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 405 RLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPT--QWGALLY 462
+L + M EK KI P + +++ + + G +A + D I + P + +L+
Sbjct: 241 QLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI-KRSIDPDIFTYNSLIN 298
Query: 463 SCYLHGSVAIGEIAANKLF------DLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVD 516
+H + A ++F D PD + + L+K + + R+ED + +
Sbjct: 299 GFCMHDRLD----KAKQMFEFMVSKDCFPDLD-TYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 517 RGL 519
RGL
Sbjct: 354 RGL 356
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 161/368 (43%), Gaps = 21/368 (5%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQMVE 181
S L+ Y + DA L DQM + + +LI G +A+AL +MV+
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 182 EGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
G +P+L T+ V+ G +++ + A D + N ++D K H+
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203
Query: 242 ARKIFNRMH----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
A +F M R + V+++S+++ +G +A M+ + P+ V+ + ++
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 298 GVSSMDLGVQ---IHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVV- 353
V+ +H +I+R ++ ++ NSLI + H RLD A+ +F M +D
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 354 ---SWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY 407
++N++I CK + + LF +M G+ D +T+ +L+ + G ++ +++
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 408 ALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLH 467
M + P + + +++ G +EKA + SE + +Y+ +
Sbjct: 384 KQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE----IKLDIYIYTTMIE 438
Query: 468 GSVAIGEI 475
G G++
Sbjct: 439 GMCKAGKV 446
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 158/323 (48%), Gaps = 17/323 (5%)
Query: 139 AHDLFDQMSQ--RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A +L ++M Q + +N++I G + DDA+ L+ +M +G+ P++ T+ ++
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS-- 254
G + + D +AL+D + K G +V+A K+++ M +R
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 255 --VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIH 309
V+++S++ + H EA F MV + C PD V+ +T++ G ++ G+++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH 365
+ +RG+ N N LI + G D A+ +F M +++++N+++ CK+
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 366 ---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEH 422
+A+ +FE ++ + ++P T+ ++ G V DG L+ ++ K +KP +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVA 538
Query: 423 HGCMVNLYGRAGMVEKAYSIITD 445
+ M++ + R G E+A ++ +
Sbjct: 539 YNTMISGFCRKGSKEEADALFKE 561
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 155/323 (47%), Gaps = 16/323 (4%)
Query: 87 IYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM 146
IY ++++ + + + + + + T +R NV S L+ ++G DA L M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 147 SQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLL 204
+R + F +++LI + + G +A LY +MV+ ++P + T+ ++ L
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 205 EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSM 260
+ +++ V D + N L+ + K + + ++F M +R ++V++N +
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGV 317
+ G A + F +MV +G P+ ++ +T+L G+ ++ + + ++ R +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALA 370
E + N +I K G+++ LF + + DVV++N++IS C+ EA A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 371 LFEQMEEAGVKPDKITFVSLLSA 393
LF++M+E G P+ + +L+ A
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRA 580
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 166/372 (44%), Gaps = 28/372 (7%)
Query: 63 HQAIEQVLKDIEASIEKGIRIDPEIYASLLE-TCYRSQA-----IRHGSQVHRLIPTVLL 116
H + + I+ + KG + D Y ++ C R + + + +L P VL
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL- 257
Query: 117 RKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIA 174
+ + ++ + +M+DA +LF +M + + ++SLIS G + DA
Sbjct: 258 -----IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 175 LYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYP 234
L M+E + PD+FTF ++ G L E+++ V+ + ++L++ +
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 235 KCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFV 290
+ +A+++F M + D V++N+++ + + E M+ F +M G + V
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 291 SISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
+ + ++ G+ D+ +I ++ GV N+ N+L+ K+G+L+ A +F +
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 348 P----ERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLV 400
E + ++N +I CK + LF + GVKPD + + +++S G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 401 NDGVRLYALMTE 412
+ L+ M E
Sbjct: 553 EEADALFKEMKE 564
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 143/293 (48%), Gaps = 16/293 (5%)
Query: 161 SGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG 220
+G ++L L DDA+AL+ +MV+ P + F ++L A + +V + G
Sbjct: 55 NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 221 NDGLGLNALVDMYPKCGHIVKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDT 276
++ + L++ + + + A + +M + + V+ +S+L Y H EA+
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 277 FCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIR---RGVEWNLSIANSLIIAYSK 333
QM + G +P+ V+ +T++ G+ + + + R +G + +L ++ K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 334 HGRLDTARWLFNLMP----ERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKIT 386
G D A L N M E V+ +N+II CK++ +AL LF++ME G++P+ +T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 387 FVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
+ SL+S G +D RL + M E+ KI P + +++ + + G + +A
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEA 345
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 166/373 (44%), Gaps = 21/373 (5%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALY 176
N+ S L+ Y + +A L DQM + + +N+LI G +A+AL
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
+MV +G +PDL T+ V+ G ++ + + L N ++D K
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 237 GHIVKARKIFNRMH----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
H+ A +F M R + V+++S+++ ++G +A M+ PD +
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 293 STILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE 349
S ++ + +++ +++R ++ ++ +SLI + H RLD A+ +F M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 350 R----DVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
+ DVV++N++I CK++ E + +F +M + G+ + +T+ L+ G +
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 403 GVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLY 462
++ M + P + + +++ + G +EKA ++ + + PT + Y
Sbjct: 450 AQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIY---TY 504
Query: 463 SCYLHGSVAIGEI 475
+ + G G++
Sbjct: 505 NIMIEGMCKAGKV 517
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 163/342 (47%), Gaps = 59/342 (17%)
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC--AGLGLLEVG-- 207
+ + +++LIS Y + GL+++AI+++ M E G+ P+L T+ V+ C G+ +V
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 208 -EEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLT 262
+E+ R+ V+ D + N+L+ + + G AR +F+ M R D S+N++L
Sbjct: 327 FDEMQRNGVQP----DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEW 319
A G A + QM ++ P+ VS ST++ G + D + + G + G+
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 320 NLSIANSLIIAYSKHGR----LDTARWLFNLMPERDVVSWNSIISAHCK----------- 364
+ N+L+ Y+K GR LD R + ++ ++DVV++N+++ + K
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 365 ---------------------------HREALALFEQMEEAGVKPDKITFVSLLSACAYL 397
++EA+ +F + + AG++ D + + +L+ A
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 398 GLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
GLV V L MT K I P + + +++ +GR+ ++++
Sbjct: 563 GLVGSAVSLIDEMT-KEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 160/378 (42%), Gaps = 37/378 (9%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+QV K + G++ D + SLL C R + + + ++V +
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
L+ G M+ A ++ QM + + ++++I G+A+ G +D+A+ L+ +M G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+ D ++ +L + +G E ++ R G D + NAL+ Y K G + +
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 244 KIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV 299
K+F M R + +++++++ Y GL EAM+ F + G + D V S ++ +
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 300 SSMDL---GVQIHGWVIRRGVEWNLSIANSLIIA------------YSKHGRLDTARWLF 344
L V + + + G+ N+ NS+I A YS G L +
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSAL 619
Query: 345 NLMPERD---VVSWNSIISAHCKHREA-------------LALFEQMEEAGVKPDKITFV 388
+ + E + V+ ++ +R L +F +M + +KP+ +TF
Sbjct: 620 SALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFS 679
Query: 389 SLLSACAYLGLVNDGVRL 406
++L+AC+ D L
Sbjct: 680 AILNACSRCNSFEDASML 697
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 16/259 (6%)
Query: 202 GLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH----RRDSVSW 257
G + + + + A G+GN +AL+ Y + G +A +FN M R + V++
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 258 NSMLTAYVHHGLEVEAMDTFC-QMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVI 313
N+++ A G+E + + F +M G +PD ++ +++L S L + +
Sbjct: 307 NAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT 366
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCK---HR 366
R +E ++ N+L+ A K G++D A + MP + +VVS++++I K
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCM 426
EAL LF +M G+ D++++ +LLS +G + + + M IK + + +
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS-VGIKKDVVTYNAL 485
Query: 427 VNLYGRAGMVEKAYSIITD 445
+ YG+ G ++ + T+
Sbjct: 486 LGGYGKQGKYDEVKKVFTE 504
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 153/308 (49%), Gaps = 15/308 (4%)
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+A +N++I G + DDA+ L+ +M +G+ PD+FT+ ++ G
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYV 265
+ + + + +AL+D + K G +V+A K+++ M +R D +++S++ +
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLS 322
H EA F M+ + C P+ V+ ST++ G ++ G+++ + +RG+ N
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPE----RDVVSWNSIISAHCKH---REALALFEQM 375
+LI + + D A+ +F M +++++N ++ CK+ +A+ +FE +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGM 435
+ + ++PD T+ ++ G V DG L+ ++ K + P + + M++ + R G
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGS 553
Query: 436 VEKAYSII 443
E+A S++
Sbjct: 554 KEEADSLL 561
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 188/400 (47%), Gaps = 50/400 (12%)
Query: 136 MEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
++DA DLF M S+ S +N L+S A++ ++ I+L QM G+ DL+T+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM---- 249
+ L + V ++ G+ D + L++L++ Y I A + ++M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 250 HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIH 309
++ D+ ++ +++ H EA+ QMV GC+PD V+ T++ G+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC--------- 234
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR--- 366
+RG ++ +A SL+ K G++ E DVV +N+II CK++
Sbjct: 235 ----KRG---DIDLALSLLKKMEK-GKI-----------EADVVIYNTIIDGLCKYKHMD 275
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCM 426
+AL LF +M+ G++PD T+ SL+S G +D RL + M E+ KI P + +
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSAL 334
Query: 427 VNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI-AANKLFDLEP 485
++ + + G + +A + + I + P + YS ++G + A +F+L
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMI-KRSIDPDIF---TYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 486 D-----NEHNFALLMKIYENAGRLED-MERVRMMLVDRGL 519
N ++ L+K + A R+E+ ME R M RGL
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-SQRGL 429
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 164/368 (44%), Gaps = 29/368 (7%)
Query: 52 LIHQQPYPQ-----------TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLET-CYRSQ 99
++ +P+P K E V+ E GI D Y+ + C RSQ
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 100 AIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR--DASAFPWN 157
+ + +++ + ++ S L+ Y + DA L DQM + F +
Sbjct: 134 LSLALAVLAKMMK-LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 158 SLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRA 217
+LI G +A+AL QMV+ G +PDL T+ V+ G +++ + + +
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 218 GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH----RRDSVSWNSMLTAYVHHGLEVEA 273
D + N ++D K H+ A +F M R D +++S+++ ++G +A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 274 MDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQ---IHGWVIRRGVEWNLSIANSLIIA 330
M+ P+ V+ S ++ V+ ++ +I+R ++ ++ +SLI
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 331 YSKHGRLDTARWLFNLMPERD----VVSWNSIISAHCKHR---EALALFEQMEEAGVKPD 383
+ H RLD A+ +F LM +D VV+++++I CK + E + LF +M + G+ +
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 384 KITFVSLL 391
+T+ +L+
Sbjct: 433 TVTYTTLI 440
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 161/353 (45%), Gaps = 18/353 (5%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDA--SAFPWNSLISGYAQLGLYDDAIALY 176
NV + +V G ME Q+ ++ +N+LIS Y+ GL ++A L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
M +G P ++T+ V+ G E +EV +R+G D +L+ K
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 237 GHIVKARKIFNRMHRRDS----VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
G +V+ K+F+ M RD V ++SM++ + G +A+ F + G PD V
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 293 STILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE 349
+ ++ G + + + + ++++G ++ N+++ K L A LFN M E
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 350 R----DVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
R D + +I HCK + A+ LF++M+E ++ D +T+ +LL +G ++
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 403 GVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPT 455
++A M K +I P + +VN G + +A+ + + I S+ PT
Sbjct: 534 AKEIWADMVSK-EILPTPISYSILVNALCSKGHLAEAFRVWDEMI-SKNIKPT 584
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 169/409 (41%), Gaps = 61/409 (14%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLL-ETCYRSQAIRHGSQVHRLIPTVLLRKNV 120
KH E+ + + G+ D Y SLL E C + + +V + + + ++
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV-ETEKVFSDMRSRDVVPDL 375
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNS----LISGYAQLGLYDDAIALY 176
S ++ L+ G ++ A F+ S ++A P N LI GY + G+ A+ L
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFN--SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 177 FQMVEEGVEPDLFTFPRVLK-VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPK 235
+M+++G D+ T+ +L +C L E + + RA F D L L+D + K
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP-DSYTLTILIDGHCK 492
Query: 236 CGHIVKARKIFNRMH----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVS 291
G++ A ++F +M R D V++N++L + G A + + MV + P +S
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 292 ISTILTGVSSMD-LGVQIHGW--VIRRGVEWNLSIANSLIIAYSKHGR------------ 336
S ++ + S L W +I + ++ + I NS+I Y + G
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 337 -----------------------LDTARWLFNLMPER------DVVSWNSIISAHCKH-- 365
+ A L M E DV ++NSI+ C+
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 366 -REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
+EA + +M E GV PD+ T+ +++ + + R++ M ++
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 166/336 (49%), Gaps = 24/336 (7%)
Query: 139 AHDLFDQMSQRDASA--FPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
AH LFD+M QR + + +++LI+ + + G++D A++ +M ++ V DL + +++
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR---- 252
+ L + R+G D + N+++++Y K +AR + M+
Sbjct: 234 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293
Query: 253 DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHG-- 310
++VS++++L+ YV + +EA+ F +M C D + + ++ +D+ +
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 311 WVIRR-GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERD----VVSWNSIISAHCK- 364
W +R+ +E N+ N+++ Y + A LF LM +D VV++N++I + K
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 365 --HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY-ALMTEKYKIKPIME 421
H +A L ++M+ G++P+ IT+ +++S G ++ L+ L + +I ++
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL- 472
Query: 422 HHGCMVNLYGRAGMVEKAYSI-----ITDGIGSEAA 452
+ M+ Y R G++ A + + D I E A
Sbjct: 473 -YQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETA 507
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 160/368 (43%), Gaps = 21/368 (5%)
Query: 80 GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDA 139
GI D Y S++ +++ R + + + + N S L+ +Y +A
Sbjct: 255 GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA 314
Query: 140 HDLFDQMSQRDASA--FPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKV 197
+F +M + + + N +I Y QL + +A L++ + + +EP++ ++ +L+V
Sbjct: 315 LSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRV 374
Query: 198 CAGLGLLEVGEEVH--RHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR--- 252
L GE +H R R + + N ++ +Y K KA + M R
Sbjct: 375 YGEAELF--GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 253 -DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGW 311
++++++++++ + G A F ++ G + D V T++ V+ +G+ H
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI--VAYERVGLMGHAK 490
Query: 312 VIRRGVEWNLSIA-NSLIIAYSKHGRLDTARWLFNLMPE----RDVVSWNSIISAHCKHR 366
+ ++ +I + I +K GR + A W+F E +D+ + +I+ + +++
Sbjct: 491 RLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQ 550
Query: 367 E---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH 423
+ +FE+M AG PD +L+A +Y M E+ + P E H
Sbjct: 551 RYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPD-EVH 609
Query: 424 GCMVNLYG 431
M++LY
Sbjct: 610 FQMLSLYS 617
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 23/296 (7%)
Query: 170 DDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEV----GEEVHRHAVRAGFGNDGLG 225
DDAI L+ MV+ P + F ++L A + +V GE++ R + G
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL----YT 122
Query: 226 LNALVDMYPKCGHIVKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMV 281
N L++ + + I A + +M + V+ +S+L Y H +A+ QMV
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 282 LEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLD 338
G +PD ++ +T++ G+ + V + +++RG + NL ++ K G D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 339 TARWLFNLMP----ERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLL 391
A L N M E DVV +N+II + CK+R +AL LF++ME G++P+ +T+ SL+
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 392 SACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGI 447
S G +D +L + M EK KI P + +++ + + G +A + D I
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 151/335 (45%), Gaps = 17/335 (5%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQMVE 181
S L+ Y + DA L DQM + + +LI G +A+AL +MV+
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 182 EGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
G +P+L T+ V+ G ++ + A D + N ++D K H+
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 242 ARKIFNRMH----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
A +F M R + V+++S+++ +G +A M+ + P+ V+ + ++
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 298 GVSSMDLGVQ---IHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER---- 350
V+ ++ +I+R ++ ++ NSL+ + H RLD A+ +F M +
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 351 DVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY 407
DVV++N++I CK + + LF +M G+ D +T+ +L+ + G ++ +++
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 408 ALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
M + P + + +++ G +EKA +
Sbjct: 459 KQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEV 492
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 158/344 (45%), Gaps = 52/344 (15%)
Query: 116 LRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAI 173
+ +V + + ++ + +++DA +LF +M + + ++SLIS G + DA
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 174 ALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMY 233
L M+E+ + P+L TF NAL+D +
Sbjct: 316 QLLSDMIEKKINPNLVTF-----------------------------------NALIDAF 340
Query: 234 PKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDF 289
K G V+A K+++ M +R D ++NS++ + H +A F MV + C PD
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 290 VSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
V+ +T++ G ++ G ++ + RG+ + +LI G D A+ +F
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 347 MPER----DVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGL 399
M D+++++ ++ C K +AL +F+ M+++ +K D + +++ G
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 400 VNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
V+DG L+ ++ K +KP + + M++ ++++AY+++
Sbjct: 521 VDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 175/383 (45%), Gaps = 37/383 (9%)
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+ S +SL++GY DA+AL QMVE G PD TF ++ GL L E
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH---GLFLHNKASE 208
Query: 210 ---VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH----RRDSVSWNSMLT 262
+ V+ G + + +V+ K G A + N+M D V +N+++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEW 319
+ + +A++ F +M +G +P+ V+ S++++ + S Q+ +I + +
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALF 372
NL N+LI A+ K G+ A L++ M +R D+ ++NS+++ C H +A +F
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLY-- 430
E M PD +T+ +L+ V DG L+ M+ + + + + + L+
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 431 GRAGMVEKAYS-IITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI-AANKLFDLEPDNE 488
G +K + +++DG+ + + YS L G G++ A ++FD +E
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPD--------IMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 489 -----HNFALLMKIYENAGRLED 506
+ + +++ AG+++D
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDD 523
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 189/393 (48%), Gaps = 19/393 (4%)
Query: 64 QAIEQVLKDIEASIEKGIRIDPEIYASLLETCY-RSQAIRHGSQVHRLIPTVLLRKNVGV 122
+ I + ++ +E G R D + +L+ + ++A + V R++ + N+
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVT 227
Query: 123 TSKLVRLYASFGYMEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
+V G ++ A +L ++M ++ +A+ ++++I + DDA+ L+ +M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
+GV P++ T+ ++ + + + + NAL+D + K G +V
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 241 KARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
+A K+++ M +R D +++S++ + H EA F M+ + C P+ V+ +T++
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 297 TGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER--- 350
G +D GV++ + +RG+ N +LI + + D A+ +F M
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 351 -DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
+++++N+++ CK+ +A+ +FE ++ + ++P T+ ++ G V DG L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 407 YALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
+ ++ K +KP + + M++ + R G+ E+A
Sbjct: 528 FCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEA 559
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 139/284 (48%), Gaps = 15/284 (5%)
Query: 170 DDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNAL 229
DDAI L+ MV+ P +F F ++L A + ++ + R G ++ N L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 230 VDMYPKCGHIVKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
++ + + I A + +M + V+ +S+L Y H +A+ QMV G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 286 KPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW 342
+PD ++ +T++ G+ + V + +++RG + NL ++ K G +D A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 343 LFNLMP----ERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACA 395
L N M E +VV ++++I + CK+R +AL LF +ME GV+P+ IT+ SL+S
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 396 YLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
+D RL + M E+ KI P + +++ + + G + +A
Sbjct: 307 NYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKEGKLVEA 349
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 131/287 (45%), Gaps = 16/287 (5%)
Query: 116 LRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAI 173
+R NV S L+ ++ DA L M +R + + +N+LI + + G +A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 174 ALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMY 233
LY +M++ ++PD+FT+ ++ L+ + + + + + N L++ +
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 234 PKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDT----FCQMVLEGCKPDF 289
K I + ++F M +R V T +H + D F QMV +G P+
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 290 VSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
++ +T+L G+ ++ + + ++ R +E + N +I K G+++ LF
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 347 MPER----DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKIT 386
+ + DV+ +N++IS C+ EA ALF +M E G PD T
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 140/281 (49%), Gaps = 20/281 (7%)
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+ S +SL++GY DA+AL QMVE G PD TF ++ GL L E
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH---GLFLHNKASE 208
Query: 210 ---VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH----RRDSVSWNSMLT 262
+ V+ G + + +V+ K G I A + N+M + V +++++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 263 AYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEW 319
+ + E +A++ F +M +G +P+ ++ S++++ + + + ++ +I R +
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 320 NLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALF 372
N+ N+LI A+ K G+L A L++ M +R D+ +++S+I+ C H EA +F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
E M P+ +T+ +L++ +++GV L+ M+++
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 83 IDPEI--YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAH 140
IDP+I Y+SL+ + + L+ + NV + L+ + +++
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 141 DLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVC 198
+LF +MSQR + + +LI G+ Q D+A ++ QMV +GV P++ T+ +L
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DS 254
G LE V + R+ N +++ K G + +F + + D
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPD 288
+ +N+M++ + GL+ EA F +M +G PD
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 170/372 (45%), Gaps = 18/372 (4%)
Query: 88 YASLLETCYRSQ-AIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQM 146
Y ++L+ RS+ I V + + + NV + L+R + G ++ A LFD+M
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 147 SQRDA--SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLL 204
+ + +N+LI GY +L DD L M +G+EP+L ++ V+ G +
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 205 EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSM 260
+ V R G+ D + N L+ Y K G+ +A + M R +++ S+
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGV 317
+ + G AM+ QM + G P+ + +T++ G S M+ ++ + G
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALA 370
++ N+LI + G+++ A + M E+ DVVS+++++S C+ EAL
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 371 LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLY 430
+ +M E G+KPD IT+ SL+ + LY M + + P + ++N Y
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML-RVGLPPDEFTYTALINAY 530
Query: 431 GRAGMVEKAYSI 442
G +EKA +
Sbjct: 531 CMEGDLEKALQL 542
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 157/332 (47%), Gaps = 18/332 (5%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
KG + Y +L++ + + I G ++ R + L N+ + ++ G M++
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 139 AHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL- 195
+ +M++R S +N+LI GY + G + A+ ++ +M+ G+ P + T+ ++
Sbjct: 294 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 353
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR--- 252
+C + E + + VR G + LVD + + G++ +A ++ M+
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 412
Query: 253 -DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQI 308
V++N+++ + G +A+ M +G PD VS ST+L+G +D +++
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 309 HGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCK 364
++ +G++ + +SLI + + R A L+ M D ++ ++I+A+C
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 365 H---REALALFEQMEEAGVKPDKITFVSLLSA 393
+AL L +M E GV PD +T+ L++
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/481 (20%), Positives = 208/481 (43%), Gaps = 29/481 (6%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVG 121
K IE+ L ++ ++ G+ + +Y +L+++ + + + + + LR N
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDV 403
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQM 179
S L+ ++ G ++ A +M + S +P+NSLI+G+ + G A +M
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
+ + +EP + T+ ++ G + ++ G L+ + G I
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 240 VKARKIFNRMH----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTI 295
A K+FN M + + V++N M+ Y G +A + +M +G PD S +
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 296 LTGVSSMDLGVQIHGWV--IRRG-VEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER-- 350
+ G+ + +V + +G E N L+ + + G+L+ A + M +R
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 351 --DVVSWNSIISAHCKHREA---LALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVR 405
D+V + +I KH++ L ++M + G+KPD + + S++ A + G +
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 406 LYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCY 465
++ LM + + P + ++N +AG V +A ++ + ++ P Q + Y C+
Sbjct: 704 IWDLMINEGCV-PNEVTYTAVINGLCKAGFVNEA-EVLCSKMQPVSSVPNQ---VTYGCF 758
Query: 466 LHGSVAIGEIAANKLFDLEP-------DNEHNFALLMKIYENAGRLEDMERVRMMLVDRG 518
L + GE+ K +L N + +L++ + GR+E+ + ++ G
Sbjct: 759 LD-ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 519 L 519
+
Sbjct: 818 V 818
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 191/431 (44%), Gaps = 29/431 (6%)
Query: 113 TVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYD 170
+V +R +V + + ++R + A ++ M D + P+N LI G +
Sbjct: 220 SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVW 279
Query: 171 DAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALV 230
+A+ + + + ++PD+ T+ ++ + E+G E+ + F +++LV
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 231 DMYPKCGHIVKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCK 286
+ K G I +A + R+ + +N+++ + EA F +M G +
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Query: 287 PDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW- 342
P+ V+ S ++ +D + G ++ G++ ++ NSLI + K G + A
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 343 ---LFNLMPERDVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAY 396
+ N E VV++ S++ +C K +AL L+ +M G+ P TF +LLS
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 397 LGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQ 456
GL+ D V+L+ M E + +KP + M+ Y G + KA+ + + + + P
Sbjct: 520 AGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE-MTEKGIVPDT 577
Query: 457 WGALLYSCYLHGSVAIGEIAANKLF-------DLEPDNEHNFALLMKIYENAGRLEDMER 509
+ Y +HG G+ + K+F + E NE + L+ + G+LE+
Sbjct: 578 YS---YRPLIHGLCLTGQASEAKVFVDGLHKGNCEL-NEICYTGLLHGFCREGKLEEALS 633
Query: 510 VRMMLVDRGLD 520
V +V RG+D
Sbjct: 634 VCQEMVQRGVD 644
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 146/364 (40%), Gaps = 96/364 (26%)
Query: 134 GYMEDAHDLFDQMSQRDA--SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF 191
G + DA LF++M++ + + +N +I GY + G A +M E+G+ PD +++
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 192 -PRVLKVC---------------------------AGL-------GLLEVGEEVHRHAVR 216
P + +C GL G LE V + V+
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 217 AGFGNDGLGLNALVDMYPKCGHIVKARKIF----NRMHRR----DSVSWNSMLTAYVHHG 268
G D + L+D K H K RK+F MH R D V + SM+ A G
Sbjct: 641 RGVDLDLVCYGVLIDGSLK--H--KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Query: 269 LEVEAMDTFCQMVLEGCKPDFVSISTILTG-------------------VSS-------- 301
EA + M+ EGC P+ V+ + ++ G VSS
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 756
Query: 302 ------------MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM-- 347
M V++H +++ G+ N + N LI + + GR++ A L M
Sbjct: 757 CFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 348 --PERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
D +++ ++I+ C+ ++A+ L+ M E G++PD++ + +L+ C G +
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 403 GVRL 406
L
Sbjct: 876 ATEL 879
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 139/291 (47%), Gaps = 17/291 (5%)
Query: 139 AHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A +L ++M + +A +N++I G + DDA L+ +M +G++PD+FT+ ++
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR---- 252
G + + D + NAL+D + K G +V+A K+++ M +
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 253 -DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQI 308
D V++N+++ + + E M+ F +M G + V+ +T++ G D +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 309 HGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCK 364
++ GV ++ N L+ +G ++TA +F M +R D+V++ ++I A CK
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 365 H---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE 412
+ LF + GVKP+ +T+ +++S GL + L+ M E
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 163/349 (46%), Gaps = 20/349 (5%)
Query: 136 MEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
++DA LF M S+ S ++ L+S A++ +D I+L QM G+ +L+T+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM---- 249
+ L + + ++ G+G + LN+L++ + I +A + ++M
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 250 HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGV 306
++ D+V++ +++ H EA+ +MV++GC+PD V+ ++ G+ DL +
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAH 362
+ + + +E ++ I N++I K+ +D A LFN M + DV ++N +IS
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 363 CKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
C + +A L M E + PD + F +L+ A G + + +LY M + P
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 420 MEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
+ + ++ + + VE+ + + G T + Y+ +HG
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT----VTYTTLIHG 400
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 165/350 (47%), Gaps = 19/350 (5%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLE-TCYRSQAIRHGSQVHRLIPTVLLRKNV 120
+H + + +E + KG + D Y +++ C R + + ++++ + +V
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADV 250
Query: 121 GVTSKLVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQ 178
+ + ++ + +M+DA DLF++M + F +N LIS G + DA L
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFG-NDGLGLNALVDMYPKCG 237
M+E+ + PDL F ++ G L E+++ V++ D + N L+ + K
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 238 HIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDT----FCQMVLEGCKPDFVSIS 293
+ + ++F M +R V T +H + D F QMV +G PD ++ +
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 294 TILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER 350
+L G+ +++ + + ++ +R ++ ++ ++I A K G+++ LF + +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 351 ----DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSA 393
+VV++ +++S C+ EA ALF +M+E G P+ T+ +L+ A
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 159/362 (43%), Gaps = 53/362 (14%)
Query: 136 MEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
+ +A L DQM + + +L+ G Q +A+AL +MV +G +PDL T+
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR- 252
V+ G ++ + + D + N ++D K H+ A +FN+M +
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 253 --------------------------------------DSVSWNSMLTAYVHHGLEVEAM 274
D V +N+++ A+V G VEA
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 275 DTFCQMVLEG-CKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIA 330
+ +MV C PD V+ +T++ G ++ G+++ + +RG+ N +LI
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 331 YSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALFEQMEEAGVKPD 383
+ + D A+ +F M D++++N ++ C + AL +FE M++ +K D
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 384 KITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
+T+ +++ A G V DG L+ ++ K +KP + + M++ + R G+ E+A ++
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 444 TD 445
+
Sbjct: 520 VE 521
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 157/344 (45%), Gaps = 52/344 (15%)
Query: 116 LRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDA--SAFPWNSLISGYAQLGLYDDAI 173
+ NV + L+R ++ A +LF+QM + + +N+L++G ++G + DA
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 174 ALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMY 233
L M++ +EP++ TF AL+D +
Sbjct: 244 WLLRDMMKRRIEPNVITF-----------------------------------TALIDAF 268
Query: 234 PKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDF 289
K G +++A++++N M + D ++ S++ +GL EA F M GC P+
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 290 VSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNL 346
V +T++ G ++ G++I + ++GV N LI Y GR D A+ +FN
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 347 MPER----DVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGL 399
M R D+ ++N ++ C K +AL +FE M + + + +T+ ++ LG
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 400 VNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
V D L+ + K +KP + + M++ + R G++ +A S+
Sbjct: 449 VEDAFDLFCSLFSK-GMKPNVITYTTMISGFCRRGLIHEADSLF 491
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 24/274 (8%)
Query: 169 YDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNA 228
++DA+ L+ +MV P + F R+L V A + +V + G N
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 229 LVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG 284
++ +A +M + D V++ S+L Y H +A+ F Q++ G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 285 CKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTAR 341
KP+ V+ +T++ + ++ V++ + G N+ N+L+ + GR A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 342 WLFNLMPER----DVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSAC 394
WL M +R +V+++ ++I A K EA L+ M + V PD T+ SL+
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI--- 300
Query: 395 AYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN 428
+G+ +Y L+ E ++ +ME +GC N
Sbjct: 301 -------NGLCMYGLLDEARQMFYLMERNGCYPN 327
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 142/306 (46%), Gaps = 49/306 (16%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
+N++I+G + ++A+ +++ M ++G+ D T+ ++ + G + R V
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSV----SWNSMLTAYVHHGLEV 271
+ + + AL+D + K G++++AR ++ M RR V ++NS++ + HG
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 272 EAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLI 328
+A F MV +GC PD V+ +T++TG ++ G+++ + +G+ + N+LI
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 329 IAYSKHGRLDTARWLFNLMPE--------------------------------------- 349
Y + G+L+ A+ +FN M +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 350 RDVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
D++++N II C K +EA LF + GVKPD I +++++S GL + +L
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 407 YALMTE 412
M E
Sbjct: 487 CRRMKE 492
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 161/366 (43%), Gaps = 52/366 (14%)
Query: 136 MEDAHDLFDQMSQRDA--SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
+DA LF +M Q S + +++ A++ +D I LY +M G+ DL++F
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGF----------------GN------------DGLG 225
++ L + + ++ GF GN DG G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 226 L-------NALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAM 274
N +++ K + A ++F M ++ D+V++N++++ + G +A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 275 DTFCQMVLEGCKPDFVSISTIL-TGVSSMDL--GVQIHGWVIRRGVEWNLSIANSLIIAY 331
MV P+ + + ++ T V +L ++ +IRR V N+ NSLI +
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 332 SKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDK 384
HG L A+++F+LM + DVV++N++I+ CK + + + LF +M G+ D
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
T+ +L+ G +N +++ M + + P + + +++ G +EKA ++
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVD-CGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 445 DGIGSE 450
D SE
Sbjct: 419 DLQKSE 424
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 144/336 (42%), Gaps = 45/336 (13%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVG 121
K++ + L+ +KGIR D Y +L+ S +++ R + + NV
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDA--SAFPWNSLISGYAQLGLYDDAIALYFQM 179
+ L+ + G + +A +L+ +M +R + F +NSLI+G+ G DA ++ M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
V +G PD+ T+ ++ +E G ++ G D N L+ Y + G +
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 240 VKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTI 295
A+K+FNRM D V++N +L ++G +A+ +++E +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL-----VMVEDLQK-------- 422
Query: 296 LTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----D 351
S MD+ + + +I+ + +L A LF + + D
Sbjct: 423 ----SEMDVDIITYNIIIQ---------------GLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 352 VVSWNSIISAHCK---HREALALFEQMEEAGVKPDK 384
+++ ++IS C+ REA L +M+E G P +
Sbjct: 464 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 155/358 (43%), Gaps = 27/358 (7%)
Query: 169 YDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNA 228
+DDA +L+ +M++ P + F RVL V A + ++ ++ G +D
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 229 LVDMYPKCGHIVKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEG 284
L+ + +C + A + +M R V+ S+L + EA+ M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 285 CKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGR-LDTA 340
P+ V +T++ G+ ++ +++ + ++G+ + N+LI S GR D A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 341 RWLFNLMPER---DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSAC 394
R L +++ + +V+ + ++I K EA L+++M V P+ T+ SL++
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 395 AYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP 454
G + D ++ LM K P + + ++ + ++ VE + + G
Sbjct: 300 CIHGCLGDAKYMFDLMVSK-GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 455 TQWGALLYSCYLHGSVAIGEI-AANKLFD------LEPDNEHNFALLMKIYENAGRLE 505
A Y+ +HG G++ A K+F+ + PD + +L+ N G++E
Sbjct: 359 ----AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV-TYNILLDCLCNNGKIE 411
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 183/463 (39%), Gaps = 93/463 (20%)
Query: 117 RKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDA-- 172
+ N + + ++ L G ++ ++FD+M + S F + +LI+ Y + G Y+ +
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 173 ----------------------------------IALYFQMVEEGVEPDLFTFPRVLKVC 198
+ L+ +M EG++PD+ T+ +L C
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 199 AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DS 254
A GL + E V R G D + LV+ + K + K + M D
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIR 314
S+N +L AY G EAM F QM GC P+ + S +L
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL------------------ 359
Query: 315 RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP----ERDVVSWNSIISAHCK---HRE 367
NL + + GR D R LF M + D ++N +I + +E
Sbjct: 360 -----NL---------FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKE 405
Query: 368 ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMV 427
+ LF M E ++PD T+ ++ AC GL D ++ MT I P + + ++
Sbjct: 406 VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVI 464
Query: 428 NLYGRAGMVEKAYSIITD--GIGSEAAGPTQWGALLYSCYLHGSVAIGEIAANKLFDLE- 484
+G+A + E+A +GS + T + +LLYS G V E ++L D
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIET-FHSLLYSFARGGLVKESEAILSRLVDSGI 523
Query: 485 PDNEHNFALLMKIYENAGRLE-------DMERVRMMLVDRGLD 520
P N F ++ Y+ G+ E DME+ R +R L+
Sbjct: 524 PRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE 566
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 126/254 (49%), Gaps = 24/254 (9%)
Query: 285 CKPD---FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTAR 341
CKP+ + + ++L +D +++ + +GV ++ +LI AY ++GR +T+
Sbjct: 137 CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 196
Query: 342 WLFNLMPER----DVVSWNSIISAHCKH----REALALFEQMEEAGVKPDKITFVSLLSA 393
L + M ++++N++I+A + L LF +M G++PD +T+ +LLSA
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 394 CAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAG 453
CA GL ++ ++ M + I P + + +V +G+ +EK + D +G A+G
Sbjct: 257 CAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLRRLEK----VCDLLGEMASG 311
Query: 454 P-----TQWGALLYSCYLHGSV--AIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLED 506
T + LL + GS+ A+G + P N + +++L+ ++ +GR +D
Sbjct: 312 GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP-NANTYSVLLNLFGQSGRYDD 370
Query: 507 MERVRMMLVDRGLD 520
+ ++ + + D
Sbjct: 371 VRQLFLEMKSSNTD 384
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 137/360 (38%), Gaps = 75/360 (20%)
Query: 85 PEI--YASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDL 142
P+I Y LLE +S +I+ V + N S L+ L+ G +D L
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 143 FDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAG 200
F +M S D A +N LI + + G + + + L+ MVEE +EPD+ T+ ++ C
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 201 LGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD----SVS 256
GL E ARKI M D S +
Sbjct: 435 GGLHE-----------------------------------DARKILQYMTANDIVPSSKA 459
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQ---IHGWVI 313
+ ++ A+ L EA+ F M G P + ++L + L + I ++
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 314 RRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHREALALFE 373
G+ N N+ I AY + G+ + EA+ +
Sbjct: 520 DSGIPRNRDTFNAQIEAYKQGGKFE----------------------------EAVKTYV 551
Query: 374 QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRA 433
ME++ PD+ T ++LS ++ LV++ + M + I P + + M+ +YG+
Sbjct: 552 DMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM-KASDILPSIMCYCMMLAVYGKT 610
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 160/342 (46%), Gaps = 19/342 (5%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDA---SAFPWNSLISGYAQLGLYDDAIAL 175
NV V + +V + G +EDA + +MS +D + +N+L++G + G AI +
Sbjct: 259 NVSV-NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 176 YFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPK 235
M++EG +PD++T+ V+ LG ++ EV + + + N L+ K
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 236 CGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVS 291
+ +A ++ + + D ++NS++ AM+ F +M +GC+PD +
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 292 ISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP 348
+ ++ + S +D + + + G ++ N+LI + K + A +F+ M
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 349 ----ERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVN 401
R+ V++N++I CK R +A L +QM G KPDK T+ SLL+ G +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 402 DGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
+ MT +P + +G +++ +AG VE A ++
Sbjct: 558 KAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 132/315 (41%), Gaps = 42/315 (13%)
Query: 108 HRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLG 167
+ LI T+ V ++L R+ S G + D +NSLI G
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDV--------------CTFNSLIQGLCLTR 414
Query: 168 LYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLN 227
+ A+ L+ +M +G EPD FT+ ++ G L+ + + +G + N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 228 ALVDMYPKCGHIVKARKIFNRMH----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE 283
L+D + K +A +IF+ M R+SV++N+++ +A QM++E
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 284 GCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTA 340
G KPD + +++LT + I + G E ++ +LI K GR++ A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 341 RWLF--------NLMPERDVVSWNSIISAHCKHR---EALALFEQM-EEAGVKPDKITFV 388
L NL P ++N +I + R EA+ LF +M E+ PD +++
Sbjct: 595 SKLLRSIQMKGINLTPH----AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY- 649
Query: 389 SLLSACAYLGLVNDG 403
+ GL N G
Sbjct: 650 ----RIVFRGLCNGG 660
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/483 (19%), Positives = 200/483 (41%), Gaps = 63/483 (13%)
Query: 48 STPLLIHQQPYPQTKHQAIEQVLKDIEASIEK-GIRIDPEIYASLLETCYRSQAIRHGSQ 106
++ LI + Y Q + Q +++L ++ I++ G++ D Y +L +++
Sbjct: 118 TSTFLILIESYAQFELQ--DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEI 175
Query: 107 VHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR----DASAFPWNSLISG 162
H + ++ +V + L++ + A + + M D F +++ G
Sbjct: 176 SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTF--TTVMQG 233
Query: 163 YAQLGLYDDAIALYFQMVE------------------------------------EGVEP 186
Y + G D A+ + QMVE +G P
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF 246
D +TF ++ G ++ E+ ++ G+ D N+++ K G + +A ++
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 247 NRMHRRD----SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS-- 300
++M RD +V++N++++ EA + + +G PD + ++++ G+
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 301 -SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP----ERDVVSW 355
+ + +++ + +G E + N LI + G+LD A + M R V+++
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 356 NSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTE 412
N++I C K REA +F++ME GV + +T+ +L+ V D +L M
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 413 KYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGP--TQWGALLYSCYLHGSV 470
+ + KP + ++ + R G ++KA I+ + S P +G L+ G V
Sbjct: 534 EGQ-KPDKYTYNSLLTHFCRGGDIKKAADIV-QAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 471 AIG 473
+
Sbjct: 592 EVA 594
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 138/284 (48%), Gaps = 15/284 (5%)
Query: 170 DDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNAL 229
DDAI L+ M + P + F ++L A + ++ G ++ N L
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 230 VDMYPKCGHIVKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
++ + +C + A + +M + D V+ NS+L + H +A+ QMV G
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 286 KPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW 342
KPD V+ +T++ G+ + V + +++RG + +L +++ K G D A
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 343 LFNLMP----ERDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACA 395
L N M E +VV ++++I + CK+R +AL LF +ME GV+P+ IT+ SL+S
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 396 YLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
G +D RL + M E+ KI P + +++ + + G + KA
Sbjct: 300 NYGRWSDASRLLSDMIER-KINPNLVTFSALIDAFVKKGKLVKA 342
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 151/342 (44%), Gaps = 53/342 (15%)
Query: 63 HQAIEQVLKDIEASIEKGIRIDPEIYASLLE-TCYRSQAIRHGSQVHRLIPTVLLRKNVG 121
H + + I+ +++G + D Y +++ C R + ++++ + NV
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-EAAKIEANVV 254
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDA--SAFPWNSLISGYAQLGLYDDAIALYFQM 179
+ S ++ + + +DA +LF +M + + ++SLIS G + DA L M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
+E + P+L TF +AL+D + K G +
Sbjct: 315 IERKINPNLVTF-----------------------------------SALIDAFVKKGKL 339
Query: 240 VKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTI 295
VKA K++ M +R + +++S++ + EA M+ + C P+ V+ +T+
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 296 LTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER-- 350
+ G +D G+++ + +RG+ N +LI + + D A+ +F M
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Query: 351 --DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITF 387
+++++N ++ CK+ +A+ +FE ++ + ++PD T+
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 135/274 (49%), Gaps = 20/274 (7%)
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE---VHRH 213
NSL++G+ DA+AL QMVE G +PD TF ++ GL L E +
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH---GLFLHNKASEAVALIDR 208
Query: 214 AVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH----RRDSVSWNSMLTAYVHHGL 269
V+ G D + A+V+ K G A + N+M + V +++++ + +
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 270 EVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANS 326
E +A++ F +M +G +P+ ++ S++++ + + ++ +I R + NL ++
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 327 LIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHC---KHREALALFEQMEEAG 379
LI A+ K G+L A L+ M +R ++ +++S+I+ C + EA + E M
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
P+ +T+ +L++ V+ G+ L+ M+++
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 126/272 (46%), Gaps = 16/272 (5%)
Query: 136 MEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
+ DA L DQM + + +LI G +A+AL +MV+ G +PDL T+
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH--- 250
V+ G ++ + A + + + ++D K H A +F M
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 251 -RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGV--- 306
R + ++++S+++ ++G +A M+ P+ V+ S ++ V
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERD----VVSWNSIISAH 362
+++ +I+R ++ N+ +SLI + RL A+ + LM +D VV++N++I+
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 363 CKHR---EALALFEQMEEAGVKPDKITFVSLL 391
CK + + + LF +M + G+ + +T+ +L+
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 166/376 (44%), Gaps = 26/376 (6%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASA--FPWNSLISGYAQLGL-YDDAIAL 175
+V + ++ Y+ G E A DLF++M + S +N ++ + ++G + + +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 176 YFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPK 235
+M +G++ D FT VL CA GLL +E G+ + NAL+ ++ K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 236 CGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVS 291
G +A + M DSV++N ++ AYV G EA M +G P+ ++
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 292 ISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM- 347
+T++ D +++ + G N N+++ K R + + M
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 348 -----PERDVVSWNSIISAHCKHRE----ALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
P R +WN+++ A C ++ +F +M+ G +PD+ TF +L+SA G
Sbjct: 449 SNGCSPNR--ATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWG 458
D ++Y MT + + + ++N R G ++I+D + S+ PT+
Sbjct: 506 SEVDASKMYGEMT-RAGFNACVTTYNALLNALARKGDWRSGENVISD-MKSKGFKPTETS 563
Query: 459 -ALLYSCYLHGSVAIG 473
+L+ CY G +G
Sbjct: 564 YSLMLQCYAKGGNYLG 579
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/492 (20%), Positives = 203/492 (41%), Gaps = 70/492 (14%)
Query: 69 VLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVR 128
VLK++E E D Y L+ R+ + + V ++ + N + ++
Sbjct: 338 VLKEME---ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 129 LYASFGYMEDAHDLFDQMSQRDASAFP----WNSLISGYAQLGLYDDAIALYFQMVEEGV 184
Y G ++A LF M ++A P +N+++S + ++ I + M G
Sbjct: 395 AYGKAGKEDEALKLFYSM--KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 185 EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARK 244
P+ T+ +L +C G+ + V R GF D N L+ Y +CG V A K
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 245 IFNRMHRRD----SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT--- 297
++ M R ++N++L A G + M +G KP S S +L
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 572
Query: 298 ------GVSSMDLGVQ----IHGWVIRR-------------------------GVEWNLS 322
G+ ++ ++ W++ R G + ++
Sbjct: 573 KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV 632
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHRE---ALALFEQM 375
I NS++ ++++ D A + + E D+V++NS++ + + E A + + +
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGM 435
E++ +KPD +++ +++ GL+ + VR+ + MTE+ I+P + + V+ Y GM
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER-GIRPCIFTYNTFVSGYTAMGM 751
Query: 436 VEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG-------SVAIGEIAANKLFDLEPDNE 488
++ I D I A + L + + G S A+ ++ K FD D++
Sbjct: 752 ----FAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQ 807
Query: 489 HNFALLMKIYEN 500
L +++ EN
Sbjct: 808 SIQRLALRVREN 819
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 151/304 (49%), Gaps = 15/304 (4%)
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+A + ++I +DA+ L+ +M +G+ P++ T+ +++ G
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYV 265
+ + + + +AL+D + K G +V+A K+++ M +R D +++S++ +
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLS 322
H EA F M+ + C P+ V+ +T++ G ++ G+++ + +RG+ N
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALFEQM 375
N+LI + G D A+ +F M D+++++ ++ CK+ +AL +FE +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGM 435
+++ ++PD T+ ++ G V DG L+ ++ K +KP + + M++ + R G+
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGL 550
Query: 436 VEKA 439
E+A
Sbjct: 551 KEEA 554
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 158/335 (47%), Gaps = 19/335 (5%)
Query: 77 IEKG-IRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGY 135
+EKG I D IY ++++ + + + + +R NV + L+R ++G
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 136 MEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
DA L M +R + + +++LI + + G +A LY +M++ ++PD+FT+
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 194 VLK-VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR 252
++ C L E + F N + N L+ + K + + ++F M +R
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPN-VVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 253 ----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLG 305
++V++N+++ G A F +MV +G PD ++ S +L G+ ++
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 306 VQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISA 361
+ + ++ + +E ++ N +I K G+++ LF + + +V+ + ++IS
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 362 HCKH---REALALFEQMEEAGVKPDKITFVSLLSA 393
C+ EA ALF +M+E G P+ T+ +L+ A
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 153/313 (48%), Gaps = 38/313 (12%)
Query: 136 MEDAHDLFDQMSQRDA--SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
++DA DLF +M Q S +N L+S A++ +D I+L +M + DL+++
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM---- 249
++ L + V ++ G+ D + L++L++ Y I +A + ++M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 250 HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIH 309
++ ++V++N+++ H EA+ +MV GC+PD + T++ G+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC--------- 231
Query: 310 GWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR--- 366
+RG ++ +A SL+ K G++ E DVV + +II A C ++
Sbjct: 232 ----KRG---DIDLALSLLKKMEK-GKI-----------EADVVIYTTIIDALCNYKNVN 272
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCM 426
+AL LF +M+ G++P+ +T+ SL+ G +D RL + M E+ KI P + +
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSAL 331
Query: 427 VNLYGRAGMVEKA 439
++ + + G + +A
Sbjct: 332 IDAFVKEGKLVEA 344
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 151/319 (47%), Gaps = 18/319 (5%)
Query: 110 LIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFP----WNSLISGYAQ 165
L+ +R + + ++ + G A DLF+ M ++ A P + S++ Y+
Sbjct: 141 LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSV 200
Query: 166 LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG 225
G ++ A++ MV EG++P++ ++ ++ A G+ V + G D +
Sbjct: 201 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 260
Query: 226 LNALVDMYPKCGHIVKARKIF--NRMHRR--DSVSWNSMLTAYVHHGLEVEAMDTFCQMV 281
L++ Y + KA+++F R RR + V++N+++ AY +G EA++ F QM
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 282 LEGCKPDFVSISTILTGVSSMDLGVQIH---GWVIRRGVEWNLSIANSLIIAYSKHGRLD 338
+G KP+ VS+ T+L S V + RG+ N + NS I +Y L+
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 339 TARWLFNLMPER----DVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLL 391
A L+ M ++ D V++ +IS C K+ EA++ ++ME+ + K + S+L
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 440
Query: 392 SACAYLGLVNDGVRLYALM 410
A + G V + ++ M
Sbjct: 441 CAYSKQGQVTEAESIFNQM 459
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 145/311 (46%), Gaps = 19/311 (6%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
++RL+A +++ A LF +M + A +++LI+ + + G + A+ L M+
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 76
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+ P T+ ++ C G EV + G G D + N ++ Y KA
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 136
Query: 244 KIFNRMH----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE--GCKPDFVSISTILT 297
F M R D+ ++N ++ G +A+D F M + C+PD V+ ++I+
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 298 GVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER---- 350
S ++ + ++ G++ N+ N+L+ AY+ HG TA + + +
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 351 DVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY 407
DVVS+ +++++ + R+ A +F M + KP+ +T+ +L+ A G + + V ++
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 408 ALMTEKYKIKP 418
M E+ IKP
Sbjct: 317 RQM-EQDGIKP 326
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 22/290 (7%)
Query: 126 LVRLYASFGYMEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
L+ + G A +L D M + S +N+LI+ G + +A+ + +M + G
Sbjct: 52 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 111
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
V PDL T VL A D N ++ K G +A
Sbjct: 112 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 171
Query: 244 KIFNRMH------RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
+FN M R D V++ S++ Y G F MV EG KP+ VS + ++
Sbjct: 172 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 231
Query: 298 -----GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM-PER- 350
G+S L V G + + G+ ++ L+ +Y + + A+ +F +M ER
Sbjct: 232 AYAVHGMSGTALSVL--GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 289
Query: 351 --DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACA 395
+VV++N++I A+ + EA+ +F QME+ G+KP+ ++ +LL+AC+
Sbjct: 290 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 339
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 139 AHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A ++F M +R + +N+LI Y G +A+ ++ QM ++G++P++ + +L
Sbjct: 277 AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA 336
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C+ ++V+ V + + G+ LN + +
Sbjct: 337 ACS-----RSKKKVNVDTVLSAAQSRGINLN--------------------------TAA 365
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRR- 315
+NS + +Y++ +A+ + M + K D V+ + +++G M + ++
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Query: 316 --GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP----ERDVVSWNSIISAHC---KHR 366
+ + +S++ AYSK G++ A +FN M E DV+++ S++ A+ K
Sbjct: 426 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 485
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
+A LF +ME G++PD I +L+ A G ++ L LM EK
Sbjct: 486 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 21/312 (6%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
+N +I +A+ D A L+F+M + +PD T+ ++ G + +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEV 271
RA N L++ G+ +A ++ +M D V+ N +L+AY
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 272 EAMDTFCQMVLEGCKPDFVSISTIL-----TGVSSMDLGVQIHGWVIRRGVEWNLSIANS 326
+A+ F M +PD + + I+ G SS L + R ++ S
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 327 LIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALFEQMEEAG 379
++ YS G ++ R +F M ++VS+N+++ A+ H AL++ +++ G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
+ PD +++ LL++ ++ LM K + KP + + +++ YG G + +A
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 440 YSII----TDGI 447
I DGI
Sbjct: 313 VEIFRQMEQDGI 324
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 151/319 (47%), Gaps = 18/319 (5%)
Query: 110 LIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDASAFP----WNSLISGYAQ 165
L+ +R + + ++ + G A DLF+ M ++ A P + S++ Y+
Sbjct: 273 LMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSV 332
Query: 166 LGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLG 225
G ++ A++ MV EG++P++ ++ ++ A G+ V + G D +
Sbjct: 333 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 392
Query: 226 LNALVDMYPKCGHIVKARKIF--NRMHRR--DSVSWNSMLTAYVHHGLEVEAMDTFCQMV 281
L++ Y + KA+++F R RR + V++N+++ AY +G EA++ F QM
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 282 LEGCKPDFVSISTILTGVSSMDLGVQIH---GWVIRRGVEWNLSIANSLIIAYSKHGRLD 338
+G KP+ VS+ T+L S V + RG+ N + NS I +Y L+
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 339 TARWLFNLMPER----DVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLL 391
A L+ M ++ D V++ +IS C K+ EA++ ++ME+ + K + S+L
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 572
Query: 392 SACAYLGLVNDGVRLYALM 410
A + G V + ++ M
Sbjct: 573 CAYSKQGQVTEAESIFNQM 591
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 145/311 (46%), Gaps = 19/311 (6%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
++RL+A +++ A LF +M + A +++LI+ + + G + A+ L M+
Sbjct: 149 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 208
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+ P T+ ++ C G EV + G G D + N ++ Y KA
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 244 KIFNRMH----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLE--GCKPDFVSISTILT 297
F M R D+ ++N ++ G +A+D F M + C+PD V+ ++I+
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 298 GVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER---- 350
S ++ + ++ G++ N+ N+L+ AY+ HG TA + + +
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 388
Query: 351 DVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY 407
DVVS+ +++++ + R+ A +F M + KP+ +T+ +L+ A G + + V ++
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 448
Query: 408 ALMTEKYKIKP 418
M E+ IKP
Sbjct: 449 RQM-EQDGIKP 458
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 22/290 (7%)
Query: 126 LVRLYASFGYMEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
L+ + G A +L D M + S +N+LI+ G + +A+ + +M + G
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
V PDL T VL A D N ++ K G +A
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 244 KIFNRMH------RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
+FN M R D V++ S++ Y G F MV EG KP+ VS + ++
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 363
Query: 298 -----GVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM-PER- 350
G+S L V G + + G+ ++ L+ +Y + + A+ +F +M ER
Sbjct: 364 AYAVHGMSGTALSVL--GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 351 --DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACA 395
+VV++N++I A+ + EA+ +F QME+ G+KP+ ++ +LL+AC+
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 139 AHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A ++F M +R + +N+LI Y G +A+ ++ QM ++G++P++ + +L
Sbjct: 409 AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA 468
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVS 256
C+ ++V+ V + + G+ LN + +
Sbjct: 469 ACS-----RSKKKVNVDTVLSAAQSRGINLN--------------------------TAA 497
Query: 257 WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRR- 315
+NS + +Y++ +A+ + M + K D V+ + +++G M + ++
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 316 --GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP----ERDVVSWNSIISAHC---KHR 366
+ + +S++ AYSK G++ A +FN M E DV+++ S++ A+ K
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 367 EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
+A LF +ME G++PD I +L+ A G ++ L LM EK
Sbjct: 618 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 152/354 (42%), Gaps = 27/354 (7%)
Query: 117 RKNVGVTSKLVRLYASFGYMEDAHDLFDQMS-QRDASAFP--WNSLISGYAQLGLYDDAI 173
RKN V L+R + G +E ++F M Q++ A +N +I +A+ D A
Sbjct: 107 RKNFPV---LIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQAR 163
Query: 174 ALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMY 233
L+F+M + +PD T+ ++ G + +RA N L++
Sbjct: 164 GLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINAC 223
Query: 234 PKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDF 289
G+ +A ++ +M D V+ N +L+AY +A+ F M +PD
Sbjct: 224 GSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT 283
Query: 290 VSISTIL-----TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLF 344
+ + I+ G SS L + R ++ S++ YS G ++ R +F
Sbjct: 284 TTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF 343
Query: 345 NLMPER----DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYL 397
M ++VS+N+++ A+ H AL++ +++ G+ PD +++ LL++
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 398 GLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII----TDGI 447
++ LM K + KP + + +++ YG G + +A I DGI
Sbjct: 404 RQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 148/303 (48%), Gaps = 21/303 (6%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALY 176
NV V + L+ G + A +L ++M ++ A +N+L++G G + DA +
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
M++ + PD+ TF ++ V G L+ +E+++ +++ + + N++++
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 237 GHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
G + A+K F+ M + + V++N++++ + + E M F +M EG D +
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 293 STILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE 349
+T++ G V + + + I W++ R V ++ L+ +G +++A F+ M E
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 350 RD----VVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
+ +V++N +I CK +A LF ++ GVKPD T+ ++ LGL +
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI-----LGLCKN 469
Query: 403 GVR 405
G R
Sbjct: 470 GPR 472
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 162/389 (41%), Gaps = 69/389 (17%)
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+ S + SL+ G+ + DA +L MV+ G EP++ +
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY------------------ 179
Query: 210 VHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYV 265
N L+D K G + A ++ N M ++ D V++N++LT
Sbjct: 180 -----------------NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSIST---ILTGVSSMDLGVQIHGWVIRRGVEWNLS 322
+ G +A M+ PD V+ + + ++D +++ +I+ V+ N
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHR---EALALFEQM 375
NS+I HGRL A+ F+LM + +VV++N++IS CK R E + LF++M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEH----HGCMVNLYG 431
G D T+ +L+ +G + + ++ M + I+ H HG VN
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN--- 399
Query: 432 RAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI-AANKLF------DLE 484
G +E A D SE G + Y+ +HG ++ A +LF ++
Sbjct: 400 --GEIESALVKFDDMRESEK----YIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 485 PDNEHNFALLMKIYENAGRLEDMERVRMM 513
PD +++ + +N R E E +R M
Sbjct: 454 PDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 149/335 (44%), Gaps = 27/335 (8%)
Query: 159 LISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAG 218
L +G+ ++DA AL+F+MV P + F R+L A L E + G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 219 FGNDGLGLNALVDMYPKCGHIVKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAM 274
+D L+ + +C + A + +M + V++ S+L + +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 275 DTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAY 331
MV G +P+ V +T++ G+ +++ +++ + ++G+ ++ N+L+
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 332 SKHGRL-DTARWLFNLMPER---DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDK 384
GR D AR L ++M DVV++ ++I K EA L+++M ++ V P+
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 385 ITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII- 443
+T+ S+++ G + D + + LM K P + + +++ + + MV++ +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASK-GCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 444 ---TDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI 475
+G ++ Y+ +HG +G++
Sbjct: 341 RMSCEGFNAD--------IFTYNTLIHGYCQVGKL 367
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 165/379 (43%), Gaps = 48/379 (12%)
Query: 63 HQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGV 122
H + + ++ +++G + D Y +++ + I + + ++ NV +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 123 TSKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
+ ++ + ++E A DLF +M + + +NSLI+ G + DA L M+
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGL---------------- 224
E+ + P++ TF ++ G L E++H ++ D +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 225 -------------------GLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSML 261
N L++ + KC + ++F M +R ++V++ +++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVE 318
+ G A F QMV D ++ S +L G+ S +D + I ++ + +E
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 319 WNLSIANSLIIAYSKHGRLDTARWLF-NLMPERDVVSWNSIISAHCKHR---EALALFEQ 374
N+ I N++I K G++ A LF +L + DVV++N++IS C R EA LF +
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 375 MEEAGVKPDKITFVSLLSA 393
M+E G P+ T+ +L+ A
Sbjct: 561 MKEDGTLPNSGTYNTLIRA 579
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 137/284 (48%), Gaps = 15/284 (5%)
Query: 170 DDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNAL 229
DDA+ L+ MV+ P + F ++L A + E+ + G +D +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 230 VDMYPKCGHIVKARKIFNRM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
++ + + + A + +M + D V+ +S+L Y H +A+ QMV G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 286 KPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW 342
KPD + +T++ G+ + V + +++RG + +L +++ K G +D A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 343 LFNLMP----ERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACA 395
L N M + +VV +N+II + CK+R A+ LF +ME G++P+ +T+ SL++
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 396 YLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
G +D RL + M EK KI P + +++ + + G + +A
Sbjct: 305 NYGRWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEGKLVEA 347
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 161/368 (43%), Gaps = 29/368 (7%)
Query: 52 LIHQQPYPQ-----------TKHQAIEQVLKDIEASIEKGIRIDPEIYASLLET-CYRSQ 99
++ +P+P K E V+ E GI D Y+ + C RSQ
Sbjct: 74 MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQ 133
Query: 100 AIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQR--DASAFPWN 157
+ + +++ + ++ S L+ Y + DA L DQM + F +
Sbjct: 134 LSLALAVLAKMMK-LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 158 SLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRA 217
+LI G +A+AL QMV+ G +PDL T+ V+ G +++ + A
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 218 GFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH----RRDSVSWNSMLTAYVHHGLEVEA 273
+ + N ++D K H+ A +F M R + V++NS++ ++G +A
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 274 MDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIA 330
M+ + P+ V+ + ++ + ++H +I+R ++ + N LI
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 331 YSKHGRLDTARWLFNLMPERDVV----SWNSIISAHCKHR---EALALFEQMEEAGVKPD 383
+ H RLD A+ +F M +D + ++N++I+ CK + + + LF +M + G+ +
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 384 KITFVSLL 391
+T+ +++
Sbjct: 433 TVTYTTII 440
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 158/336 (47%), Gaps = 25/336 (7%)
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE---VHRH 213
+SL++GY DA+AL QMVE G +PD FTF ++ GL L E +
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH---GLFLHNKASEAVALVDQ 213
Query: 214 AVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH----RRDSVSWNSMLTAYVHHGL 269
V+ G D + +V+ K G I A + N+M + + V +N+++ + +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 270 EVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANS 326
A+D F +M +G +P+ V+ ++++ + + ++ ++ + + N+ N+
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 327 LIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHR---EALALFEQMEEAG 379
LI A+ K G+L A L M +R D +++N +I+ C H EA +F+ M
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 380 VKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
P+ T+ +L++ V DGV L+ M+++ + + + ++ + +AG + A
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT-IIQGFFQAGDCDSA 452
Query: 440 YSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI 475
+ + + PT + YS LHG + G++
Sbjct: 453 QMVFKQMVSNRV--PTD--IMTYSILLHGLCSYGKL 484
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 149/316 (47%), Gaps = 22/316 (6%)
Query: 84 DPEIYASLLETCYRSQAIR--HGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHD 141
+ +IY+ L + R R H QVH + ++ R + ++L+ ++ S G ++
Sbjct: 87 NEDIYSCLAKESARENDQRGAHELQVHIMKSSI--RPTITFINRLLLMHVSCGRLDITRQ 144
Query: 142 LFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR-----VLK 196
+FD+M RD + W + G ++G Y+DA L+ M++ + F P VLK
Sbjct: 145 MFDRMPHRDFHS--WAIVFLGCIEMGDYEDAAFLFVSMLKHS-QKGAFKIPSWILGCVLK 201
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGN--DGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
CA + E+G++VH + GF + D +L+ Y + + A + +++ ++
Sbjct: 202 ACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANT 261
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD----LGVQIHG 310
V+W + +T G E + F +M G K + S +L S + G Q+H
Sbjct: 262 VAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHA 321
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS-WNSIISAHCK---HR 366
I+ G E + I LI Y K+G++ A +F + VS WN++++++ + +
Sbjct: 322 NAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYI 381
Query: 367 EALALFEQMEEAGVKP 382
EA+ L QM+ G+K
Sbjct: 382 EAIKLLYQMKATGIKA 397
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 73 IEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTV--LLRKNVGVTSKLVRLY 130
++ S + +I I +L+ C + G QVH L + + ++ ++ L+R Y
Sbjct: 181 LKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFY 240
Query: 131 ASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFT 190
F +EDA+ + Q+S +A+ W + ++ + G + + I + +M G++ ++
Sbjct: 241 GEFRCLEDANLVLHQLS--NANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSV 298
Query: 191 FPRVLKVCAGLGLL-EVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM 249
F VLK C+ + G++VH +A++ GF +D L L++MY K G + A K+F
Sbjct: 299 FSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSS 358
Query: 250 HRRDSVS-WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKP 287
SVS WN+M+ +Y+ +G+ +EA+ QM G K
Sbjct: 359 KDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKA 397
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 25/267 (9%)
Query: 226 LNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
+N L+ M+ CG + R++F+RM RD SW + + G +A F M+
Sbjct: 126 INRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQ 185
Query: 286 KPDFVSISTILTGV-------SSMDLGVQIHGWVIRRGV--EWNLSIANSLIIAYSKHGR 336
K F S IL V +LG Q+H + G E + ++ SLI Y +
Sbjct: 186 KGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRC 245
Query: 337 LDTARWLFNLMPERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSA 393
L+ A + + + + V+W + ++ + +E + F +M G+K + F ++L A
Sbjct: 246 LEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKA 305
Query: 394 CAYLGLVNDGVRLYALMTEKYKIKPIMEHHGC-----MVNLYGRAGMVEKAYSIITDGIG 448
C++ V+DG R IK E C ++ +YG+ G V+ A +
Sbjct: 306 CSW---VSDGGR-SGQQVHANAIKLGFE-SDCLIRCRLIEMYGKYGKVKDAEKVFKS--S 358
Query: 449 SEAAGPTQWGALLYSCYLHGSVAIGEI 475
+ + W A++ S Y+ + I I
Sbjct: 359 KDETSVSCWNAMVAS-YMQNGIYIEAI 384
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 169/400 (42%), Gaps = 59/400 (14%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVG 121
K I + K + + +G D Y L+ + + + IP + +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIV 354
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRDA---SAFPWNSLISGYAQLGLYDDAIALYFQ 178
+ + L+ + + G ++DA + M +NSLI GY + GL A+ +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 179 MVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGH 238
M +G +P+++++ LVD + K G
Sbjct: 415 MRNKGCKPNVYSY-----------------------------------TILVDGFCKLGK 439
Query: 239 IVKARKIFNRMH----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSIST 294
I +A + N M + ++V +N +++A+ EA++ F +M +GCKPD + ++
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 295 ILTGVSSMDLGVQIHGWVIR----RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM--- 347
+++G+ +D ++ W++R GV N N+LI A+ + G + AR L N M
Sbjct: 500 LISGLCEVD-EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 348 -PERDVVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDG 403
D +++NS+I C+ E A +LFE+M G P I+ L++ G+V +
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 404 VRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
V M + I+ + ++N RAG +E ++
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNS-LINGLCRAGRIEDGLTMF 657
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 122/286 (42%), Gaps = 14/286 (4%)
Query: 172 AIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVD 231
A +++ M+ + P LFTF V+K + ++ + R + G + + L+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 232 MYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKP 287
KC + +A ++ M D+ ++N ++ EA +M++ G P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 288 DFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
D ++ ++ G+ + V + R + + I N+LI + HGRLD A+ + + M
Sbjct: 321 DDITYGYLMNGLCKIG-RVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 348 PER-----DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGL 399
DV ++NS+I + K AL + M G KP+ ++ L+ LG
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 400 VNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
+++ + M+ +KP C+++ + + + +A I +
Sbjct: 440 IDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 180/391 (46%), Gaps = 20/391 (5%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
E +++++E E+GI IY ++++ + G V + + V L
Sbjct: 434 EALVREME---EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 127 VRLYASFGYMEDAHDLFDQMSQRDA--SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGV 184
+ LY G + A ++ M + + ++ +I+G+ +L + +A A++ MV+EG+
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 185 EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARK 244
+PD+ + ++ G+G ++ + + + ++ Y K G + ++ +
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 245 IFNRMHRRDSV----SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS 300
+F+ M R V ++N ++ V +A++ +M L G + + + I+ G +
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYA 670
Query: 301 SMDLGVQIHGWVIR---RGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV----V 353
S+ + + R G++ ++ +L+ A K GR+ +A + M R++
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 354 SWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALM 410
+N +I + EA L +QM++ GVKPD T+ S +SAC+ G +N + M
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 411 TEKYKIKPIMEHHGCMVNLYGRAGMVEKAYS 441
E +KP ++ + ++ + RA + EKA S
Sbjct: 791 -EALGVKPNIKTYTTLIKGWARASLPEKALS 820
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 143/336 (42%), Gaps = 17/336 (5%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
+V+ Y G M A + F++M R ++ + SLI YA D+A++ +M EEG
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+E L T+ ++ + G E + A R + ++ + + ++ +A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 244 KIFNRMHRRDSVS----WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL--- 296
+ M + +++M+ Y E + + F ++ G P V+ ++
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 297 TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DV 352
T V + +++ + GV+ NL + +I + K A +F M + DV
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 353 VSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYAL 409
+ +N+IISA C A+ ++M++ +P TF+ ++ A G + + ++ +
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 410 MTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
M + + +G + L + M EKA I+ +
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQM-EKAVEILDE 649
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 11/207 (5%)
Query: 246 FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SM 302
F ++ + + M+ Y G A +TF +M G P ++++ + M
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 303 DLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN----LMPERDVVSWNSI 358
D + + G+E +L + ++ +SK G + A + F+ + + + I
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420
Query: 359 ISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYK 415
I AHC+ A AL +MEE G+ + +++ + G+ ++ + E
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE-CG 479
Query: 416 IKPIMEHHGCMVNLYGRAGMVEKAYSI 442
P + +GC++NLY + G + KA +
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEV 506
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 152/315 (48%), Gaps = 42/315 (13%)
Query: 136 MEDAHDLFDQMSQRDASAFP----WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF 191
++DA +LF M + + FP ++ L+S A++ +D I+L QM G+ +L+T+
Sbjct: 62 LDDAVNLFGDMVK--SRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 119
Query: 192 PRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM-- 249
++ L + V ++ G+ D + LN+L++ + I A + +M
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 250 --HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQ 307
++ DS ++N+++ H EA+ +MV++GC+PD V+ G+
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT------------YGIV 227
Query: 308 IHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSIISAHCKHR- 366
++G R ++ LS+ + + G++ E VV +N+II A C ++
Sbjct: 228 VNGLCKRGDIDLALSLLKKM-----EQGKI-----------EPGVVIYNTIIDALCNYKN 271
Query: 367 --EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHG 424
+AL LF +M+ G++P+ +T+ SL+ G +D RL + M E+ KI P +
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFS 330
Query: 425 CMVNLYGRAGMVEKA 439
+++ + + G + +A
Sbjct: 331 ALIDAFVKEGKLVEA 345
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 173/394 (43%), Gaps = 52/394 (13%)
Query: 62 KHQAIEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVG 121
+H + + ++ + KG + D Y ++ + I + + + + V
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQM 179
+ + ++ ++ + DA +LF +M + + +NSLI G + DA L M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
+E + P++ TF +AL+D + K G +
Sbjct: 318 IERKINPNVVTF-----------------------------------SALIDAFVKEGKL 342
Query: 240 VKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTI 295
V+A K+++ M +R D +++S++ + H EA F M+ + C P+ V+ +T+
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 296 LTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER-- 350
+ G +D G+++ + +RG+ N +LI + + D A+ +F M
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 351 --DVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVR 405
D+++++ ++ C K AL +FE ++ + ++PD T+ ++ G V DG
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 406 LYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
L+ ++ K +KP + + M++ + R G+ E+A
Sbjct: 523 LFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEA 555
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 158/343 (46%), Gaps = 21/343 (6%)
Query: 68 QVLKDIE-ASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
+LK +E IE G+ IY ++++ + + + + +R NV + L
Sbjct: 242 SLLKKMEQGKIEPGV----VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 127 VRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGV 184
+R ++G DA L M +R + + +++LI + + G +A LY +M++ +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 185 EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARK 244
+PD+FT+ ++ L+ + + + + + N L+ + K + + +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 245 IFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDT----FCQMVLEGCKPDFVSISTILTGVS 300
+F M +R V T +H + D F QMV +G PD ++ S +L G+
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 301 S---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVV 353
+ ++ + + ++ R +E ++ N +I K G+++ LF + + +VV
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 354 SWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSA 393
++ +++S C+ EA ALF +M+E G PD T+ +L+ A
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 131/272 (48%), Gaps = 16/272 (5%)
Query: 136 MEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
+ DA L QM + +F +N+LI G + +A+AL +MV +G +PDL T+
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH--- 250
V+ G +++ + + + + N ++D ++ A +F M
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 251 -RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQ-- 307
R + V++NS++ ++G +A M+ P+ V+ S ++ V+
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 308 -IHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERD----VVSWNSIISAH 362
++ +I+R ++ ++ +SLI + H RLD A+ +F LM +D VV++N++I
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 363 CKHR---EALALFEQMEEAGVKPDKITFVSLL 391
CK + E + LF +M + G+ + +T+ +L+
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 136/277 (49%), Gaps = 26/277 (9%)
Query: 157 NSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLL------EVGEEV 210
NSL++G+ DA++L QMVE G +PD FTF ++ GL E V
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH-----GLFRHNRASEAVALV 209
Query: 211 HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD----SVSWNSMLTAYVH 266
R V+ G D + +V+ K G I A + +M + V +N+++ A +
Sbjct: 210 DRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 267 HGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSI 323
+ +A++ F +M +G +P+ V+ ++++ + + ++ +I R + N+
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 324 ANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALFEQME 376
++LI A+ K G+L A L++ M +R D+ +++S+I+ C H EA +FE M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 377 EAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
P+ +T+ +L+ V++G+ L+ M+++
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 164/385 (42%), Gaps = 47/385 (12%)
Query: 73 IEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS 132
+ + KG+ ID Y +++ + + + + ++ +V + S ++
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 133 FGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFT 190
G+ DA LF +M ++ + F +N +I G+ G + DA L M+E + PD+ T
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 191 FPRVLKVCAGLGLLEVGEE-----VHR---------HAVRAGFGN--------------- 221
F ++ G L E+ +HR +++ GF
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 222 --DGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVE----AMD 275
D + N ++D+Y + + + ++ + RR V+ + +H EV+ A D
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 276 TFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYS 332
F +M+ G PD ++ + +L G ++ +++ + ++ + N +I
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 333 KHGRLDTARWLFNLMP----ERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKI 385
K ++D A LF +P E DV ++N +IS C +A LF +M++ G +PD
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 386 TFVSLLSACAYLGLVNDGVRLYALM 410
T+ +L+ C G ++ + L + M
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEM 633
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 131 ASFGYMED-----AHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
A FGYM + A LFDQM + + +N+LI+G G +A AL +MV +G
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 184 VEPDLFTFPRVLK-VC------AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
+ D+ T+ ++ +C + L LL EE H D + +A++D K
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-------IKPDVVIYSAIIDRLCKD 309
Query: 237 GHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
GH A+ +F+ M + + ++N M+ + G +A M+ PD ++
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 293 STILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE 349
+ +++ + ++ ++ R + + NS+I + KH R D A+ +F+LM
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 350 RDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
DVV++N+II +C+ + E + L ++ G+ + T+ +L+ + +N L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 407 YALM 410
+ M
Sbjct: 490 FQEM 493
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 33/254 (12%)
Query: 256 SWNSMLTAYVH-HGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGW 311
S+N ++ + H L ++ TF ++ G +PD V+ +T+L G+ D + + G+
Sbjct: 143 SFNILIKCFCDCHKLSF-SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 312 VIRRG-----------VEWNLS----IANSLIIAYSKHGRLDTARWLFNLMPER----DV 352
++ G VE L+ N+LI GR+ A L N M + DV
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 353 VSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYAL 409
V++ +I++ CK + AL L +MEE +KPD + + +++ G +D L++
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 410 MTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGS 469
M EK I P + + CM++ + G A ++ D I E L ++ + S
Sbjct: 322 MLEK-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE----INPDVLTFNALISAS 376
Query: 470 VAIGEI-AANKLFD 482
V G++ A KL D
Sbjct: 377 VKEGKLFEAEKLCD 390
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 164/385 (42%), Gaps = 47/385 (12%)
Query: 73 IEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS 132
+ + KG+ ID Y +++ + + + + ++ +V + S ++
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 133 FGYMEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFT 190
G+ DA LF +M ++ + F +N +I G+ G + DA L M+E + PD+ T
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 191 FPRVLKVCAGLGLLEVGEE-----VHR---------HAVRAGFGN--------------- 221
F ++ G L E+ +HR +++ GF
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 222 --DGLGLNALVDMYPKCGHIVKARKIFNRMHRRDSVSWNSMLTAYVHHGLEVE----AMD 275
D + N ++D+Y + + + ++ + RR V+ + +H EV+ A D
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 276 TFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYS 332
F +M+ G PD ++ + +L G ++ +++ + ++ + N +I
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 333 KHGRLDTARWLFNLMP----ERDVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKI 385
K ++D A LF +P E DV ++N +IS C +A LF +M++ G +PD
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 386 TFVSLLSACAYLGLVNDGVRLYALM 410
T+ +L+ C G ++ + L + M
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEM 633
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 150/325 (46%), Gaps = 34/325 (10%)
Query: 131 ASFGYMED-----AHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
A FGYM + A LFDQM + + +N+LI+G G +A AL +MV +G
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 184 VEPDLFTFPRVLK-VC------AGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
+ D+ T+ ++ +C + L LL EE H D + +A++D K
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-------IKPDVVIYSAIIDRLCKD 309
Query: 237 GHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
GH A+ +F+ M + + ++N M+ + G +A M+ PD ++
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 293 STILTG-VSSMDL--GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPE 349
+ +++ V L ++ ++ R + + NS+I + KH R D A+ +F+LM
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 350 RDVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
DVV++N+II +C+ + E + L ++ G+ + T+ +L+ + +N L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 407 YALMTEKYKIKPIMEHHGCMVNLYG 431
+ M + + P + C + LYG
Sbjct: 490 FQEMI-SHGVCP--DTITCNILLYG 511
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 33/254 (12%)
Query: 256 SWNSMLTAYVH-HGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGW 311
S+N ++ + H L ++ TF ++ G +PD V+ +T+L G+ D + + G+
Sbjct: 143 SFNILIKCFCDCHKLSF-SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 312 VIRRG-----------VEWNLS----IANSLIIAYSKHGRLDTARWLFNLMPER----DV 352
++ G VE L+ N+LI GR+ A L N M + DV
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 353 VSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYAL 409
V++ +I++ CK + AL L +MEE +KPD + + +++ G +D L++
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 410 MTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGS 469
M EK I P + + CM++ + G A ++ D I E L ++ + S
Sbjct: 322 MLEK-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE----INPDVLTFNALISAS 376
Query: 470 VAIGEI-AANKLFD 482
V G++ A KL D
Sbjct: 377 VKEGKLFEAEKLCD 390
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 155/347 (44%), Gaps = 16/347 (4%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
++ I I P Y ++++ S + + + + R NV + + L++ +
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 138 DAHDLFDQMSQRDASA--FPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL 195
DA + +M ++ + F +NSLI G ++ D+A + +MVE G++P+ FT+ +
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 196 KVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR--- 252
++ + G + + L++ Y K G +++A + M +
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 253 -DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQI 308
D+ ++ ++ + +A + F +M +G PD S ++ G S +M I
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 309 HGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCK 364
++ G+ N+ I N L+ + + G ++ A+ L + M + + V++ +II +CK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 365 H---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
EA LF++M+ G+ PD + +L+ C L V + ++
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 175/407 (42%), Gaps = 65/407 (15%)
Query: 93 ETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRDAS 152
E C + + I S ++ +L T + L+ + ++DA ++F +M + +
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN-DKVDDAEEIFREMRGKGIA 624
Query: 153 --AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEV 210
F + LI+G+++LG A +++ +MVEEG+ P++ +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY------------------- 665
Query: 211 HRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVH 266
N L+ + + G I KA+++ + M + ++V++ +++ Y
Sbjct: 666 ----------------NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 267 HGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSI 323
G EA F +M L+G PD +T++ G ++ ++ + I G ++G + +
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAP 768
Query: 324 ANSLIIAYSKHGRLDTARWLFNLMPERDV--------VSWNSIISAHCKH---REALALF 372
N+LI K G+ + + N + + V++N +I CK A LF
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYK--IKPIMEHHGCMVNLY 430
QM+ A + P IT+ SLL+ +G ++ + E I+P + ++N +
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMG---RRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
Query: 431 GRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSC--YLHGSVAIGEI 475
+ GM KA ++ D + ++ A + +C L G +GE+
Sbjct: 886 LKEGMTTKAL-VLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEM 931
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 169/398 (42%), Gaps = 55/398 (13%)
Query: 136 MEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
+EDA L +M S ++ LI G + D A L +MV G+ + +
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDC 352
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
+ V + G++E + + + +G +L++ Y + ++ + ++ M +R+
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412
Query: 254 SV----SWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGV 306
V ++ +++ G A + +M+ GC+P+ V +T++ S +
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAH 362
++ + +G+ ++ NSLII SK R+D AR M E + ++ + IS +
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 363 CKHRE---ALALFEQMEEAGVKPDKITFVSLLS----------AC-AYLGLVNDGV---- 404
+ E A ++M E GV P+K+ L++ AC AY +V+ G+
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 405 RLYA-LMTEKYK------------------IKPIMEHHGCMVNLYGRAGMVEKAYSIITD 445
+ Y LM +K I P + +G ++N + + G ++KA SI D
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF-D 651
Query: 446 GIGSEAAGPTQWGALLYSCYLHGSVAIGEI-AANKLFD 482
+ E P ++Y+ L G GEI A +L D
Sbjct: 652 EMVEEGLTPN---VIIYNMLLGGFCRSGEIEKAKELLD 686
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 147/325 (45%), Gaps = 17/325 (5%)
Query: 134 GYMEDAHDLFDQMSQ--RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF 191
G + +A +L D+M + + N+L++G G DA+ L +MVE G +P+ T+
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 192 PRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH- 250
VLKV G + E+ R D + + ++D K G + A +FN M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 251 ---RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDL 304
+ D + + +++ + + G + M+ PD V+ S ++ +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIIS 360
++H +I+RG+ + SLI + K +LD A + +LM + ++ ++N +I+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 361 AHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIK 417
+CK + L LF +M GV D +T+ +L+ LG + L+ M + +++
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVR 454
Query: 418 PIMEHHGCMVNLYGRAGMVEKAYSI 442
P + + +++ G EKA I
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEI 479
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 161/373 (43%), Gaps = 53/373 (14%)
Query: 73 IEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS 132
I+ +E G + + Y +L+ +S ++ R + ++ + S ++
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 133 FGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFT 190
G +++A +LF++M + A + +LI G+ G +DD L M++ + PD+
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 191 FPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR------- 243
F ++ G L EE+H+ ++ G D + +L+D + K + KA
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 244 ----------------------------KIFNRMHRR----DSVSWNSMLTAYVHHG-LE 270
++F +M R D+V++N+++ + G LE
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSL 327
V A + F +MV +PD VS +L G+ + ++I + + +E ++ I N +
Sbjct: 440 V-AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 328 IIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALFEQMEEAGV 380
I ++D A LF +P + DV ++N +I CK EA LF +MEE G
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 381 KPDKITFVSLLSA 393
P+ T+ L+ A
Sbjct: 559 SPNGCTYNILIRA 571
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 163/397 (41%), Gaps = 57/397 (14%)
Query: 137 EDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRV 194
+DA DLF +M S+ ++ L S A+ YD + L QM +G+ +L+T +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM----H 250
+ C L + ++ G+ D + + L++ G + +A ++ +RM H
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 251 RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHG 310
+ ++ N+++ +G +A+ +MV G +P+ V+ +G
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT-----------------YG 216
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH- 365
V++ K G+ A L M ER D V ++ II CK
Sbjct: 217 PVLK---------------VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 366 --REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHH 423
A LF +ME G K D I + +L+ Y G +DG +L M K KI P +
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI-KRKITPDVVAF 320
Query: 424 GCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI-AANKLFD 482
+++ + + G + +A + + I + T + Y+ + G ++ AN + D
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDT----VTYTSLIDGFCKENQLDKANHMLD 376
Query: 483 LEPD-----NEHNFALLMKIYENAGRLED-MERVRMM 513
L N F +L+ Y A ++D +E R M
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 130/316 (41%), Gaps = 50/316 (15%)
Query: 252 RDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKP---DFVSISTILTGVSSMDLGVQI 308
+ VS+ L + + E +A+D F +M +P DF + +++ DL + +
Sbjct: 35 KGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDL 94
Query: 309 HGWVIRRGVEWNLSIANSLIIAYSKHGRLDTA----RWLFNLMPERDVVSWNSIISAHC- 363
+ +G+ NL + +I + +L A + L E D V+++++I+ C
Sbjct: 95 CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCL 154
Query: 364 --KHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIME 421
+ EAL L ++M E G KP IT +L++ G V+D V L M E +P
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEV 213
Query: 422 HHGCMVNLYGRAGMVEKA------------------YSIITDGIGSEAAGPTQWG----- 458
+G ++ + ++G A YSII DG+ + + +
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 459 --------ALLYSCYLHGSVAIG--EIAANKLFDL-----EPDNEHNFALLMKIYENAGR 503
++Y+ + G G + A L D+ PD F+ L+ + G+
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA-FSALIDCFVKEGK 332
Query: 504 LEDMERVRMMLVDRGL 519
L + E + ++ RG+
Sbjct: 333 LREAEELHKEMIQRGI 348
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 156/349 (44%), Gaps = 21/349 (6%)
Query: 136 MEDAHDLFDQMSQ--RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
+ +A +L D+M + + N+L++G G DA+ L +MVE G +P+ T+
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMH--- 250
VL V G + E+ R D + + ++D K G + A +FN M
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 251 -RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGV 306
+ D +++N+++ + + G + M+ P+ V+ S ++ +
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAH 362
Q+ +++RG+ N NSLI + K RL+ A + +LM + D++++N +I+ +
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 363 CKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
CK + L LF +M GV + +T+ +L+ G + +L+ M + +++P
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPD 472
Query: 420 MEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
+ + +++ G +EKA I G + +Y +HG
Sbjct: 473 IVSYKILLDGLCDNGELEKALEI----FGKIEKSKMELDIGIYMIIIHG 517
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 145/332 (43%), Gaps = 53/332 (15%)
Query: 79 KGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMED 138
KG + D Y +L+ + G+++ R + + NV S L+ + G + +
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 139 AHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK 196
A L +M QR + +NSLI G+ + ++AI + M+ +G +PD+ TF
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF----- 406
Query: 197 VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR---- 252
N L++ Y K I ++F M R
Sbjct: 407 ------------------------------NILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 253 DSVSWNSMLTAYVHHG-LEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQI 308
++V++N+++ + G LEV A F +MV +PD VS +L G+ ++ ++I
Sbjct: 437 NTVTYNTLVQGFCQSGKLEV-AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 309 HGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCK 364
G + + +E ++ I +I ++D A LF +P + D ++N +IS C+
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 365 H---REALALFEQMEEAGVKPDKITFVSLLSA 393
+A LF +M E G PD++T+ L+ A
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 143/304 (47%), Gaps = 15/304 (4%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
+N+L++G +A+ L +MVE G +P L T ++ G + + V
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEV 271
GF + + ++++ K G A ++ +M R D+V ++ ++ G
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 272 EAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLI 328
A + F +M ++G K D ++ +T++ G + D G ++ +I+R + N+ + LI
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 329 IAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALFEQMEEAGVK 381
++ K G+L A L M +R + +++NS+I CK EA+ + + M G
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 382 PDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYS 441
PD +TF L++ ++DG+ L+ M+ + I + ++ +V + ++G +E A
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT-LVQGFCQSGKLEVAKK 459
Query: 442 IITD 445
+ +
Sbjct: 460 LFQE 463
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 153/358 (42%), Gaps = 27/358 (7%)
Query: 170 DDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNAL 229
DDA+ L+ M++ P + F R+ A E+ + + G + L+ +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 230 VDMYPKCGHIVKA----RKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGC 285
++ + +C + A KI + D+V +N++L EA++ +MV G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 286 KPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARW 342
KP ++++T++ G+ + V + ++ G + N ++ K G+ A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 343 LFNLMPER----DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACA 395
L M ER D V ++ II CK A LF +ME G K D IT+ +L+
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 396 YLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPT 455
G +DG +L M K KI P + +++ + + G + +A ++ + + A T
Sbjct: 310 NAGRWDDGAKLLRDMI-KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 456 QWGALLYSCYLHGSVAIGEI-AANKLFDL------EPDNEHNFALLMKIYENAGRLED 506
+ Y+ + G + A ++ DL +PD F +L+ Y A R++D
Sbjct: 369 ----ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD-IMTFNILINGYCKANRIDD 421
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 164/322 (50%), Gaps = 21/322 (6%)
Query: 136 MEDAHDLFDQMSQRDASAFP----WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF 191
+ DA DLF M + + FP +N L+S +L YD I+L +M G+ DL+TF
Sbjct: 66 LNDAIDLFSDMVK--SRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 192 PRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRM-- 249
V+ + + + ++ G+ D + + +LV+ + + + A + ++M
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 250 --HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDL 304
++ D V++N+++ + +A D F ++ +G +P+ V+ + ++ G+ S
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP----ERDVVSWNSIIS 360
++ +I++ + N+ ++L+ A+ K+G++ A+ LF M + D+V+++S+I+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 361 AHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIK 417
C H EA +F+ M G D +++ +L++ V DG++L+ M+++ +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 418 PIMEHHGCMVNLYGRAGMVEKA 439
+ ++ ++ + +AG V+KA
Sbjct: 364 NTVTYNT-LIQGFFQAGDVDKA 384
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 157/357 (43%), Gaps = 51/357 (14%)
Query: 73 IEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS 132
++ +E G + D Y +++++ +++ + + I +R NV + LV +
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 133 FGYMEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFT 190
DA L M ++ + +++L+ + + G +A L+ +MV ++PD+ T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 191 FPRVLKVCAGLGLLEVGEEVHRH---AVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN 247
+ ++ GL L + +E ++ V G D + N L++ + K + K+F
Sbjct: 298 YSSLIN---GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 248 RMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD 303
M +R ++V++N+++ + G +A + F QM G PD + + +L G+
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD-- 412
Query: 304 LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSII 359
+G L+ A +F M +R D+V++ ++I
Sbjct: 413 ------------------------------NGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 360 SAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
CK EA +LF + G+KPD +T+ +++S GL+++ LY M ++
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 155/336 (46%), Gaps = 50/336 (14%)
Query: 158 SLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVL-KVCAGLGL---LEVGEEVHRH 213
SL++G+ + DA++L +MVE G +PD+ + ++ +C + + +E+ R
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 214 AVRA----------GFGNDG---------------------LGLNALVDMYPKCGHIVKA 242
+R G N + +AL+D + K G +++A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 243 RKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG 298
+++F M R D V+++S++ H EA F MV +GC D VS +T++ G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 299 VSS---MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP----ERD 351
++ G+++ + +RG+ N N+LI + + G +D A+ F+ M D
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 352 VVSWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYA 408
+ ++N ++ C + E AL +FE M++ + D +T+ +++ G V + L+
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 409 LMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIIT 444
++ K +KP + + M++ G++ + ++ T
Sbjct: 460 SLSLK-GLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 171/366 (46%), Gaps = 19/366 (5%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+E+ + + +E GI+ D +Y +++++ ++ + + + + +R +V + +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
LV + G DA L M++R +N+LI + + G + DA LY +M+
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+ P++FT+ ++ G ++ ++ G D + +L++ + KC + A
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 244 KIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV 299
KIF M ++ +++++ +++ + G A + F MV G P+ + + +L +
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 300 S---SMDLGVQIHGWVIRR---GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV- 352
+ + I + +R GV N+ N L+ +G+L+ A +F M +R++
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 353 ---VSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
+++ II CK + A+ LF + GVKP+ +T+ +++S GL ++ L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 407 YALMTE 412
+ M E
Sbjct: 518 FRKMKE 523
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 166/372 (44%), Gaps = 26/372 (6%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVE 181
+KL+ + A + +L D + S + N L++ + Q A + +M++
Sbjct: 76 TKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK 135
Query: 182 EGVEPDLFTFPRVLK-VCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
G EPD+ TF ++ C G + E V++ V G D + ++D K GH+
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ-MVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 241 KARKIFNRMH----RRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
A +F++M R D V + S++ + G +A M KPD ++ + ++
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 297 TGVSS----MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER-- 350
+D +++ +IR + N+ SLI + G +D AR +F LM +
Sbjct: 255 DAFVKEGKFLD-AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 351 --DVVSWNSIISAHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVR 405
DVV++ S+I+ CK + +A+ +F +M + G+ + IT+ +L+ +G N
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 406 LYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAG--PTQWGALLYS 463
+++ M + + P + + +++ G V+KA I D E G P W Y+
Sbjct: 374 VFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT---YN 429
Query: 464 CYLHGSVAIGEI 475
LHG G++
Sbjct: 430 VLLHGLCYNGKL 441
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 140/297 (47%), Gaps = 19/297 (6%)
Query: 136 MEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
ME+A + +QM + + ++I + G + A++L+ QM G+ PD+ +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR- 252
++ G + + R + D + NAL+D + K G + A +++N M R
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 253 ---DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGV 306
+ ++ S++ + G EA F M +GC PD V+ ++++ G +D +
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAH 362
+I + ++G+ N +LI + + G+ + A+ +F+ M R ++ ++N ++
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 363 C---KHREALALFEQMEEA---GVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
C K ++AL +FE M++ GV P+ T+ LL Y G + + ++ M ++
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 137/317 (43%), Gaps = 44/317 (13%)
Query: 78 EKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYME 137
++ I+ D + +L++ + +++ + + + N+ + L+ + G ++
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 138 DAHDLFDQMSQRDASAFP----WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPR 193
+A +F M + FP + SLI+G+ + DDA+ ++++M ++G+ + T+
Sbjct: 300 EARQMFYLMETK--GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 194 VLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD 253
+++ +G V +EV H V G + N L+ G + KA IF M +R+
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 254 SVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHG 310
++G P+ + + +L G+ ++ + +
Sbjct: 418 ----------------------------MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449
Query: 311 WVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH- 365
+ +R ++ + +I K G++ A LF +P + +VV++ ++IS +
Sbjct: 450 DMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Query: 366 --REALALFEQMEEAGV 380
EA LF +M+E GV
Sbjct: 510 LKHEAHVLFRKMKEDGV 526
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 28/246 (11%)
Query: 209 EVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF-NRMHRRDSVSWNSMLTAYVHH 267
++HR+ + G L + L+D+ R+I N +H S+ +N
Sbjct: 7 QLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLH---SLQFN--------- 54
Query: 268 GLEVEAMDTFCQMVLEGCKP---DFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIA 324
EA+D F MV P DF + ++ + D+ + + + GV +L
Sbjct: 55 ----EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 325 NSLIIAYSKHGRLDTARWLFNLMP----ERDVVSWNSIISAHC---KHREALALFEQMEE 377
N L+ + + + A M E D+V++ S+I+ C + EA+++ QM E
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 378 AGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVE 437
G+KPD + + +++ + G VN + L+ M E Y I+P + + +VN +G
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 438 KAYSII 443
A S++
Sbjct: 230 DADSLL 235
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 156/347 (44%), Gaps = 36/347 (10%)
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQ----MSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
V + L+ +EDA LFD+ S D F N LI G +G + A+ L
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTF--NILIRGLCGVGKAEKALELLG 230
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAG--FGNDGLGLNALVDMYPK 235
M G EPD+ T+ +++ L E+ + V++G D + +++ Y K
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCK 289
Query: 236 CGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVS 291
G + +A + + M R +V++N ++ Y G + A + +M+ GC PD V+
Sbjct: 290 AGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 292 ISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP 348
++++ G V + G ++ + RG+ N + LI A RL AR L +
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 349 ERDVVS----WNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVN 401
+D++ +N +I CK EA + E+ME+ KPDKITF L+ G +
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 402 DGVRLYALMT------EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
+ V ++ M +K + ++ C++ +AGM ++AY +
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLS---CLL----KAGMAKEAYHL 509
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 29/283 (10%)
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVH 211
S + +N L + GL+D A ++ M +GV P+ R+L G + E+
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN----NRLL----GFLVSSFAEKGK 153
Query: 212 RHAVRA----GFGNDG--LGLNALVDMYPKCGHIVKARKIFNRMHR----RDSVSWNSML 261
H A F +G + +N+L++ K + A K+F+ R D+ ++N ++
Sbjct: 154 LHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGV- 317
G +A++ M GC+PD V+ +T++ G + ++ ++ V V
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVC 273
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV----VSWNSIISAHCKHREALALFE 373
++ S+I Y K G++ A L + M + V++N ++ + K E L E
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 374 ---QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
+M G PD +TF SL+ +G V+ G RL+ M +
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 111/265 (41%), Gaps = 44/265 (16%)
Query: 77 IEKGIRIDPEI--YASLLETCYRSQAIRHGSQVHRLIPT-VLLRKNVGVTSKLVRLYASF 133
+ G +P+I Y +L++ +S + S++ + + + + +V + ++ Y
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 134 GYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF 191
G M +A L D M + + +N L+ GYA+ G A + +M+ G PD+ TF
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 192 PRVLKVCAGLGLLEVG----EEVHRHAVRAGFGNDGLGLNAL------------------ 229
++ +G + G EE++ + + +NAL
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 230 -------------VDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVE 272
+D + K G + +A I M ++ D +++ ++ + G E
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 273 AMDTFCQMVLEGCKPDFVSISTILT 297
A+ F +MV GC PD +++S++L+
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLS 495
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 156/347 (44%), Gaps = 36/347 (10%)
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQ----MSQRDASAFPWNSLISGYAQLGLYDDAIALYF 177
V + L+ +EDA LFD+ S D F N LI G +G + A+ L
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTF--NILIRGLCGVGKAEKALELLG 230
Query: 178 QMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAG--FGNDGLGLNALVDMYPK 235
M G EPD+ T+ +++ L E+ + V++G D + +++ Y K
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCK 289
Query: 236 CGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVS 291
G + +A + + M R +V++N ++ Y G + A + +M+ GC PD V+
Sbjct: 290 AGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 292 ISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP 348
++++ G V + G ++ + RG+ N + LI A RL AR L +
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 349 ERDVVS----WNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVN 401
+D++ +N +I CK EA + E+ME+ KPDKITF L+ G +
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 402 DGVRLYALMT------EKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
+ V ++ M +K + ++ C++ +AGM ++AY +
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLS---CLL----KAGMAKEAYHL 509
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 29/283 (10%)
Query: 152 SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVH 211
S + +N L + GL+D A ++ M +GV P+ R+L G + E+
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN----NRLL----GFLVSSFAEKGK 153
Query: 212 RHAVRA----GFGNDG--LGLNALVDMYPKCGHIVKARKIFNRMHR----RDSVSWNSML 261
H A F +G + +N+L++ K + A K+F+ R D+ ++N ++
Sbjct: 154 LHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 262 TAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGV- 317
G +A++ M GC+PD V+ +T++ G + ++ ++ V V
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVC 273
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV----VSWNSIISAHCKHREALALFE 373
++ S+I Y K G++ A L + M + V++N ++ + K E L E
Sbjct: 274 SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEE 333
Query: 374 ---QMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEK 413
+M G PD +TF SL+ +G V+ G RL+ M +
Sbjct: 334 IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR 376
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 111/265 (41%), Gaps = 44/265 (16%)
Query: 77 IEKGIRIDPEI--YASLLETCYRSQAIRHGSQVHRLIPT-VLLRKNVGVTSKLVRLYASF 133
+ G +P+I Y +L++ +S + S++ + + + + +V + ++ Y
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 134 GYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF 191
G M +A L D M + + +N L+ GYA+ G A + +M+ G PD+ TF
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 192 PRVLKVCAGLGLLEVG----EEVHRHAVRAGFGNDGLGLNAL------------------ 229
++ +G + G EE++ + + +NAL
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 230 -------------VDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVE 272
+D + K G + +A I M ++ D +++ ++ + G E
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 273 AMDTFCQMVLEGCKPDFVSISTILT 297
A+ F +MV GC PD +++S++L+
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLS 495
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 156/372 (41%), Gaps = 51/372 (13%)
Query: 73 IEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYAS 132
I+ +E G + + Y +L +S ++ R + ++ + S ++
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 133 FGYMEDAHDLFDQMSQRDASA--FPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFT 190
G +++A +LF++M + + +N LI G+ G +DD L M++ + P++ T
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 191 FPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARK------ 244
F ++ G L EE+H+ + G D + +L+D + K H+ KA +
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 245 -----------------------------IFNRMHRR----DSVSWNSMLTAYVHHGLEV 271
+F +M R D+V++N+++ + G
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 272 EAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLSIANSLI 328
A + F +MV P+ V+ +L G+ + ++I + + +E ++ I N +I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 329 IAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALFEQMEEAGVK 381
++D A LF +P + V ++N +I CK EA LF +MEE G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 382 PDKITFVSLLSA 393
PD T+ L+ A
Sbjct: 576 PDGWTYNILIRA 587
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 144/325 (44%), Gaps = 17/325 (5%)
Query: 134 GYMEDAHDLFDQMSQ--RDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTF 191
G + +A +L D+M + N+L++G G +A+ L +MVE G +P+ T+
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 192 PRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR 251
VL V G + E+ R D + + ++D K G + A +FN M
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 252 R----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV---SSMDL 304
+ + +++N ++ + + G + M+ P+ V+ S ++ +
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 305 GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIIS 360
++H +I RG+ + SLI + K LD A + +LM + ++ ++N +I+
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 361 AHCKHR---EALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIK 417
+CK + L LF +M GV D +T+ +L+ LG +N L+ M + K+
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVP 470
Query: 418 PIMEHHGCMVNLYGRAGMVEKAYSI 442
P + + +++ G EKA I
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEI 495
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 170/405 (41%), Gaps = 73/405 (18%)
Query: 137 EDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFT---- 190
+DA DLF M S+ + ++ L S A+ YD +AL QM +G+ +L+T
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 191 ---FPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN 247
F R K+C L +G+ ++ G+ + + + L++ G + +A ++ +
Sbjct: 130 INCFCRCRKLC--LAFSAMGK-----IIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182
Query: 248 RM----HRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMD 303
RM H+ D ++ N+++ G E EAM +MV GC+P+ V+ +L
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN------ 236
Query: 304 LGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSII 359
K G+ A L M ER D V ++ II
Sbjct: 237 --------------------------VMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 360 SAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKI 416
CKH A LF +ME G+ + IT+ L+ G +DG +L M K KI
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI-KRKI 329
Query: 417 KPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI- 475
P + +++ + + G + +A + + I A T + Y+ + G +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT----ITYTSLIDGFCKENHLD 385
Query: 476 AANKLFDL------EPDNEHNFALLMKIYENAGRLED-MERVRMM 513
AN++ DL +P N F +L+ Y A R++D +E R M
Sbjct: 386 KANQMVDLMVSKGCDP-NIRTFNILINGYCKANRIDDGLELFRKM 429
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 127/281 (45%), Gaps = 24/281 (8%)
Query: 150 DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEE 209
+ + +++LI+G G +A+ L +MVE G +PDL T ++ GL G+E
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN-----GLCLSGKE 209
Query: 210 VH-----RHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSM 260
V G + + ++++ K G A ++ +M R D+V ++ +
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 261 LTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM---DLGVQIHGWVIRRGV 317
+ HG A + F +M ++G + ++ + ++ G + D G ++ +I+R +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 318 EWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHR---EALA 370
N+ + LI ++ K G+L A L M R D +++ S+I CK +A
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 371 LFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
+ + M G P+ TF L++ ++DG+ L+ M+
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 115/258 (44%), Gaps = 23/258 (8%)
Query: 279 QMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHG 335
QM L+G + ++S ++ + L G +I+ G E N ++LI G
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 336 RLDTARWLFNLMPER----DVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFV 388
R+ A L + M E D+++ N++++ C K EA+ L ++M E G +P+ +T+
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 389 SLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIG 448
+L+ G + L M E+ IK + +++ + G ++ A+++ +
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE--- 288
Query: 449 SEAAGPTQWGALLYSCYLHGSVAIG--EIAANKLFDL-----EPDNEHNFALLMKIYENA 501
E G T + Y+ + G G + A L D+ P N F++L+ +
Sbjct: 289 MEMKGITT-NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP-NVVTFSVLIDSFVKE 346
Query: 502 GRLEDMERVRMMLVDRGL 519
G+L + E + ++ RG+
Sbjct: 347 GKLREAEELHKEMIHRGI 364
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 165/375 (44%), Gaps = 25/375 (6%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
+N+LI Y + G +DA L+ +M++ GV D TF ++ C G L E + +
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR----RDSVSWNSMLTAYVHHGLEV 271
G D N L+ ++ G I A + + ++ + D+V+ ++L +
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 272 EAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIAN--SLII 329
E +M + D S+ I+ + L VQ R ++ LS ++I
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVID 487
Query: 330 AYSKHGRLDTARWLF----NLMPER-DVVSWNSIISAHCK---HREALALFEQMEEAGVK 381
Y++ G A +F N+ +R DV+ +N +I A+ K H +AL+LF+ M+ G
Sbjct: 488 VYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTW 547
Query: 382 PDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYS 441
PD+ T+ SL A + LV++ R+ A M + KP + + M+ Y R G++ A
Sbjct: 548 PDECTYNSLFQMLAGVDLVDEAQRILAEMLDS-GCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 442 IITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI-AANKLFDLEPD-----NEHNFALLM 495
+ + + P + ++Y ++G G + A + F + + N L+
Sbjct: 607 LY-EAMEKTGVKPNE---VVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 496 KIYENAGRLEDMERV 510
K Y G LE+ RV
Sbjct: 663 KAYSKVGCLEEARRV 677
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 153/337 (45%), Gaps = 31/337 (9%)
Query: 126 LVRLYASFGYMEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
L+ LY G + DA +LF +M S +N++I G +A +L +M E+G
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG 370
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+ PD T+ +L + A G +E E +R + G D + A++ + + + +
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVE 430
Query: 244 KIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV 299
+ M R D S ++ YV+ GL V+A F + L D V ST L V
Sbjct: 431 AVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQL-----DCVLSSTTLAAV 485
Query: 300 SSMDLGVQIHGWVIRRGVEW---NLSIA-------NSLIIAYSKHGRLDTARWLFNLMPE 349
+D+ + WV V + N+S N +I AY K + A LF M
Sbjct: 486 --IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 350 R----DVVSWNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVND 402
+ D ++NS+ EA + +M ++G KP T+ +++++ LGL++D
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 403 GVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
V LY M EK +KP +G ++N + +GMVE+A
Sbjct: 604 AVDLYEAM-EKTGVKPNEVVYGSLINGFAESGMVEEA 639
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 162/370 (43%), Gaps = 52/370 (14%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDAS--AFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
++ + G++ +A L +M ++ S +N L+S +A G + A+ Y ++ + G
Sbjct: 346 MIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVG 405
Query: 184 VEPDLFTFPRVLKV-CAGLGLLEVGE---EVHRHAVRAG----------FGNDGL----- 224
+ PD T VL + C + EV E+ R+++R + N+GL
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAK 465
Query: 225 ---------------GLNALVDMYPKCGHIVKARKIFN-----RMHRRDSVSWNSMLTAY 264
L A++D+Y + G V+A +F R D + +N M+ AY
Sbjct: 466 ALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAY 525
Query: 265 VHHGLEVEAMDTFCQMVLEGCKPD---FVSISTILTGVSSMDLGVQIHGWVIRRGVEWNL 321
L +A+ F M +G PD + S+ +L GV +D +I ++ G +
Sbjct: 526 GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC 585
Query: 322 SIANSLIIAYSKHGRLDTARWLFNLMPERDV----VSWNSIISAHCKH---REALALFEQ 374
++I +Y + G L A L+ M + V V + S+I+ + EA+ F
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRM 645
Query: 375 MEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAG 434
MEE GV+ + I SL+ A + +G + + R+Y M + + P + M++L G
Sbjct: 646 MEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDS-EGGPDVAASNSMLSLCADLG 704
Query: 435 MVEKAYSIIT 444
+V +A SI
Sbjct: 705 IVSEAESIFN 714
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 169/395 (42%), Gaps = 27/395 (6%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
E +LK +E EKGI D + Y LL + I + +R I V L + +
Sbjct: 360 ESLLKKME---EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAV 416
Query: 127 VRLYASFGYMEDAHDLFDQMSQR----DASAFPWNSLISGYAQLGLYDDAIALYFQMVEE 182
+ + + + + +M + D + P ++ Y GL A AL+ + +
Sbjct: 417 LHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVP--VIMQMYVNEGLVVQAKALFERFQLD 474
Query: 183 GVEPDLFTFPRVLKVCAGLGLLEVGEEV-HRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
V T V+ V A GL E V + +G ND L N ++ Y K K
Sbjct: 475 CVLSST-TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEK 533
Query: 242 ARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
A +F M + D ++NS+ L EA +M+ GCKP + + ++
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 298 GVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
+ L V ++ + + GV+ N + SLI +++ G ++ A F +M E V S
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 355 ----WNSIISAHCK---HREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY 407
S+I A+ K EA ++++M+++ PD S+LS CA LG+V++ ++
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Query: 408 ALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSI 442
+ EK I M+ LY GM+++A +
Sbjct: 714 NALREKGTCDVI--SFATMMYLYKGMGMLDEAIEV 746
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 151/332 (45%), Gaps = 23/332 (6%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVE 181
+ ++ Y G + DA DL++ M + + + SLI+G+A+ G+ ++AI YF+M+E
Sbjct: 589 AAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ-YFRMME 647
Query: 182 E-GVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
E GV+ + ++K + +G LE V+ + G D N+++ + G +
Sbjct: 648 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVS 707
Query: 241 KARKIFNRMHRR---DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILT 297
+A IFN + + D +S+ +M+ Y G+ EA++ +M G D S + ++
Sbjct: 708 EAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMA 767
Query: 298 GVSS----MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHG-------RLDTARWLFN- 345
++ + H ++ R + + +L K G +L TA +N
Sbjct: 768 CYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTA---YNE 824
Query: 346 LMPERDVVSWNSIISAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVR 405
P ++ SA + AL +++ + + + +++ + G ++ ++
Sbjct: 825 AKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALK 884
Query: 406 LYALMTEKYKIKPIMEHHGCMVNLYGRAGMVE 437
Y M EK ++P + +V +YG+AGMVE
Sbjct: 885 AYMRMQEK-GLEPDIVTQAYLVGIYGKAGMVE 915
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 160/353 (45%), Gaps = 46/353 (13%)
Query: 72 DIEASIEK-GIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLY 130
D+ ++EK G++ + +Y SL+ S + Q R++ ++ N V + L++ Y
Sbjct: 606 DLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAY 665
Query: 131 ASFGYMEDAHDLFDQMSQRDASAFP----WNSLISGYAQLGLYDDAIALYFQMVEEGVEP 186
+ G +E+A ++D+M +D+ P NS++S A LG+ +A +++ + E+G
Sbjct: 666 SKVGCLEEARRVYDKM--KDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-C 722
Query: 187 DLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIF 246
D+ +F ++ + G+G+L+ EV +G +D N ++ Y G + + ++F
Sbjct: 723 DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELF 782
Query: 247 NRM--HRRDSVSWNSMLTAYV---HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS 301
+ M R+ + W + T + G+ EA+ Q KP + + T S+
Sbjct: 783 HEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQL-QTAYNEAKP-LATPAITATLFSA 840
Query: 302 MDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVSWNSII-- 359
M L AY+ L++ + L + R+ ++N++I
Sbjct: 841 MGL------------------------YAYA----LESCQELTSGEIPREHFAYNAVIYT 872
Query: 360 -SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMT 411
SA AL + +M+E G++PD +T L+ G+V R+++ +T
Sbjct: 873 YSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLT 925
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/419 (17%), Positives = 188/419 (44%), Gaps = 28/419 (6%)
Query: 124 SKLVRLYASFGYMEDAHDLF---DQMSQRDASAFPWNSLISGYAQLGLYDDAIALYFQMV 180
+ ++ +YA G +A +F MS + +N +I Y + L++ A++L+ M
Sbjct: 483 AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 181 EEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIV 240
+G PD T+ + ++ AG+ L++ + + + +G A++ Y + G +
Sbjct: 543 NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLS 602
Query: 241 KARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
A ++ M + + V + S++ + G+ EA+ F M G + + + +++++
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 297 ---TGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER--- 350
+ V ++ +++ + +++ +NS++ + G + A +FN + E+
Sbjct: 663 KAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC 722
Query: 351 DVVSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLY 407
DV+S+ +++ + EA+ + E+M E+G+ D +F +++ A G +++ L+
Sbjct: 723 DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELF 782
Query: 408 ALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDG------IGSEAAGPTQWGALL 461
M + K+ + L + G+ +A S + + + A T + A+
Sbjct: 783 HEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAM- 841
Query: 462 YSCYLHGSVAIGEIAANKLFDLEPDNEHNFALLMKIYENAGRLEDMERVRMMLVDRGLD 520
Y + + E+ + ++ P + ++ Y +G ++ + M + ++GL+
Sbjct: 842 -GLYAYALESCQELTSGEI----PREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLE 895
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 39/260 (15%)
Query: 221 NDGLGLNALVDMYPKCGHIVKA----RKIFNRMHRRDSVSWNSMLTAYVHHGLEVEAMDT 276
N+ G+ LVD+Y K G + +A + + RMH D V+ +++ + + G E + D
Sbjct: 180 NNTYGM--LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSG-EFDRADR 236
Query: 277 FCQMVLEG-CKPDFVSISTILTGVSSMD-------LGVQIHGWVIRRGVEWNLSIA---- 324
F + G D SI S+ L +++ R +E +L A
Sbjct: 237 FFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSD 296
Query: 325 ------------NSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSII---SAHCKH 365
N+LI Y K GRL+ A LF+ M + D V++N++I H
Sbjct: 297 SSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHL 356
Query: 366 REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGC 425
EA +L ++MEE G+ PD T+ LLS A G + + Y + K + P H
Sbjct: 357 SEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKI-RKVGLFPDTVTHRA 415
Query: 426 MVNLYGRAGMVEKAYSIITD 445
++++ + MV + ++I +
Sbjct: 416 VLHILCQRKMVAEVEAVIAE 435
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 28/324 (8%)
Query: 124 SKLVRLYASFGYMEDAHDLFDQMSQRDA--SAFPWNSLISGYAQLGLYDDAIALYFQMVE 181
+KL+R+ G +++ L D++ +R + F +N I G Q G D A+ + ++E
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 182 EGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVK 241
+G +PD+ T+ ++ + E V G D N L+ Y K G +
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 242 ARKI-----FNRMHRRDSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTIL 296
A +I FN D ++ S++ H G A+ F + + +G KP+ + +T++
Sbjct: 340 AERIVGDAVFNGF-VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 297 TGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER--- 350
G+S+ + Q+ + +G+ + N L+ K G + A L +M +
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 351 -DVVSWNSII---SAHCKHREALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRL 406
D+ ++N +I S K AL + + M + GV PD T+ SLL+ D +
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 407 YALMTEKYKIKPIMEHHGCMVNLY 430
Y M EK GC NL+
Sbjct: 519 YKTMVEK----------GCAPNLF 532
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 146/304 (48%), Gaps = 19/304 (6%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLK-VCAGLGLLEVGEEVHRHA 214
+N+LI G + + +A +MV EG+EPD +T+ ++ C G G++++ E + A
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG-GMVQLAERIVGDA 347
Query: 215 VRAGFGNDGLGLNALVDMYPKCGHIVKARKIFN----RMHRRDSVSWNSMLTAYVHHGLE 270
V GF D +L+D G +A +FN + + + + +N+++ + G+
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWV---IRRGVEWNLSIANSL 327
+EA +M +G P+ + + ++ G+ M G V I +G ++ N L
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 328 IIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHC---KHREALALFEQMEEAGV 380
I YS +++ A + ++M + DV ++NS+++ C K + + ++ M E G
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 381 KPDKITFVSLL-SACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKA 439
P+ TF LL S C Y L ++ + L M K + P G +++ + + G ++ A
Sbjct: 528 APNLFTFNILLESLCRYRKL-DEALGLLEEMKNK-SVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 440 YSII 443
Y++
Sbjct: 586 YTLF 589
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 32/330 (9%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
+N+LI G + G+ +A L +M E+G+ P++ TF ++ +G + + + + +
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEV 271
G+ D N L+ Y + A +I + M D ++NS+L
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 272 EAMDTFCQMVLEGCKPDFVSISTILTGVS---SMDLGVQIHGWVIRRGVEWNLSIANSLI 328
+ M+T+ MV +GC P+ + + +L + +D + + + + V + +LI
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 329 IAYSKHGRLDTARWLFNLMPERDVVS-----WNSIISAHCKHRE---ALALFEQMEEAGV 380
+ K+G LD A LF M E VS +N II A + A LF++M + +
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 381 KPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVN-------LYGRA 433
PD T+ ++ G VN G + M E I P + G ++N +Y A
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI-PSLTTLGRVINCLCVEDRVYEAA 692
Query: 434 G----MVEK-----AYSIITDGIGSEAAGP 454
G MV+K A + I D E A P
Sbjct: 693 GIIHRMVQKGLVPEAVNTICDVDKKEVAAP 722
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 26/265 (9%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
L+ Y++ ME+A ++ D M D + +NSL++G + ++D + Y MVE+G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 184 VEPDLFTFP-------RVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
P+LFTF R K+ LGLL EE+ +V D + L+D + K
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLL---EEMKNKSVNP----DAVTFGTLIDGFCKN 579
Query: 237 GHIVKARKIFNRMHRRDSVS-----WNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVS 291
G + A +F +M VS +N ++ A+ A F +MV PD +
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 292 ISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP 348
++ G +++LG + ++ G +L+ +I R+ A + + M
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 349 ERDVV--SWNSIISAHCKHREALAL 371
++ +V + N+I K A L
Sbjct: 700 QKGLVPEAVNTICDVDKKEVAAPKL 724
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 107/246 (43%), Gaps = 37/246 (15%)
Query: 227 NALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVL 282
NA++ + G+ +A K++ RM R D S+ + ++ A+ M
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSS 174
Query: 283 EGCKPDFVSISTILTGVSSMDL---GVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDT 339
+GC+ + V+ T++ G + G ++ G ++ GV LS N L+ K G +
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKE 234
Query: 340 ARWLFNLMPERDVV----SWNSIISAHCKHRE---ALALFEQMEEAGVKPDKITFVSLL- 391
L + + +R V+ ++N I C+ E A+ + + E G KPD IT+ +L+
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIY 294
Query: 392 ---------SACAYLG-LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYS 441
A YLG +VN+G ++P + ++ Y + GMV+ A
Sbjct: 295 GLCKNSKFQEAEVYLGKMVNEG------------LEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 442 IITDGI 447
I+ D +
Sbjct: 343 IVGDAV 348
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 141/296 (47%), Gaps = 16/296 (5%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALY 176
NV V + L+ + G + DA +FD++++R + +N+LI+GY ++G D+ L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
QM + PD+FT+ ++ ++ + + G + + L+ + +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 237 GHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
G I ++ + +M + D V +N+++ + +G V A + M+ G +PD ++
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 293 STILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGR-LDTARWLFNLMP 348
+T++ G ++ ++I + + G+E + ++L+ K GR +D R L ++
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 349 ---ERDVVSWNSIISAHCKHREA---LALFEQMEEAGVKPDKITFVSLLSACAYLG 398
+ D V++ ++ A CK +A L ++M+ G P +T+ LL+ LG
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 127/289 (43%), Gaps = 13/289 (4%)
Query: 117 RKNVGVTSKLVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIA 174
R +V S L+ M+ AH LFD+M +R + + +LI G+++ G D
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 175 LYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYP 234
Y +M+ +G++PD+ + ++ G L + +R G D + L+D +
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFC 426
Query: 235 KCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFV 290
+ G + A +I M + D V +++++ G ++A +M+ G KPD V
Sbjct: 427 RGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDV 486
Query: 291 SISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLM 347
+ + ++ G ++ + G ++ N L+ K G++ A L + M
Sbjct: 487 TYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546
Query: 348 PE----RDVVSWNSIISAHCKHREALALFEQMEEAGVKPDKITFVSLLS 392
D +++N+++ H +H + + Q E G+ D ++ S+++
Sbjct: 547 LNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVN 595
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 113/234 (48%), Gaps = 24/234 (10%)
Query: 217 AGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRD----SVSWNSMLTAYVHHGLEVE 272
AGF + N L++ + K G+I A+K+F+ + +R VS+N+++ Y G E
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 273 AMDTFCQMVLEGCKPDFVSISTILTGV---SSMDLGVQIHGWVIRRGVEWNLSIANSLII 329
QM +PD + S ++ + + MD + + +RG+ N I +LI
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 330 AYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHREALA---LFEQMEEAGVKP 382
+S++G +D + + M + D+V +N++++ CK+ + +A + + M G++P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 383 DKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMV 436
DKIT+ +L+ G V + +I+ M+ +G ++ G + +V
Sbjct: 414 DKITYTTLIDGFCRGGDVETAL----------EIRKEMDQNGIELDRVGFSALV 457
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 193/451 (42%), Gaps = 38/451 (8%)
Query: 101 IRHGS--QVHRLIPTVLLRKNVGVTS----KLVRLYASFGYMEDAHDLFDQMSQR--DAS 152
+R+GS QVH + + + NV V S LV YA+ E + F + S
Sbjct: 128 VRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLS 187
Query: 153 AFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHR 212
A L+ + D +Y +M+ ++P++FTF V+ G + +V
Sbjct: 188 ALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 213 HAVRAGFGNDGLGLNALVDMYPKC---GHIVKARKIFNRMHRRDS----VSWNSMLTAYV 265
G + + N L+D Y K G + KA + M D ++N ++ +
Sbjct: 248 DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFW 307
Query: 266 HHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSS---MDLGVQIHGWVIRRGVEWNLS 322
+M F +M+ + KP+ +S ++++ G+ + + + + ++ GV+ NL
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 323 IANSLIIAYSKHGRLDTARWLFNLMPERDVVS----WNSIISAHCKH---REALALFEQM 375
N+LI + K+ L A +F + + V +N +I A+CK + AL E+M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 376 EEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGM 435
E G+ PD T+ L++ G + +L+ +T K + ++ H M Y R G
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK-GLPDLVTFHILMEG-YCRKGE 485
Query: 436 VEKAYSIITDGIGSEAAGPTQWGALLYSCYLHGSVAIGEI--AANKLFDLEPD-----NE 488
KA ++ + + P L Y+ + G G + A N +E + N
Sbjct: 486 SRKAAMLLKE-MSKMGLKPRH---LTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 489 HNFALLMKIYENAGRLEDMERVRMMLVDRGL 519
++ +L++ Y G+LED + ++++GL
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 147/329 (44%), Gaps = 27/329 (8%)
Query: 67 EQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKL 126
+ VLK++ +E + + + L++ ++ + +V + + ++ NV + L
Sbjct: 281 DAVLKEM---VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 127 VRLYASFGYMEDAHDLFDQM--SQRDASAFPWNSLISGYAQLGLYDDAIALYFQMVEEGV 184
+ + G + +A + D+M + + +N+LI+G+ + + +A+ ++ + +G
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 185 EPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARK 244
P + ++ LG ++ G + R G D N L+ + G+I A+K
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 245 IFNRMHRR---DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV-- 299
+F+++ + D V+++ ++ Y G +A +M G KP ++ + ++ G
Sbjct: 458 LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 300 -----SSMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDVVS 354
++ ++ Q+ R + N++ N L+ YS+ G+L+ A L N M E+ +V
Sbjct: 518 EGNLKAATNMRTQMEK---ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Query: 355 WNSIISAHCKHREALALFEQMEEAGVKPD 383
N I K E+M + G PD
Sbjct: 575 -NRITYEIVK--------EEMVDQGFVPD 594
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 153/361 (42%), Gaps = 51/361 (14%)
Query: 66 IEQVLKDIEASIEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSK 125
+E+ K I+ KGI+ + Y +++ + + V +++ + N +
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 126 LVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
L+ L G M DA LFD+M +R ++ + SLIS + G A L+ ++ E+G
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+ P +T+ AL+D K G + A
Sbjct: 360 LSPSSYTY-----------------------------------GALIDGVCKVGEMGAAE 384
Query: 244 KIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGV 299
+ N M + V +N+++ Y G+ EA + M +G + D + +TI +
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 300 SSMDLGVQIHGWVIRR---GVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPERDV---- 352
+ + + W+ R GV+ + +LI Y K G ++ A+ LF M + V
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 353 VSWNSIISAHCKH---REALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYAL 409
+++N +I A+CK +EA L ME G+ PD T+ SL+ V++ +RL++
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 410 M 410
M
Sbjct: 565 M 565
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 9/216 (4%)
Query: 122 VTSKLVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALYFQM 179
V + L+ Y G +++A ++D M Q+ A F N++ S + +L YD+A F+M
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 180 VEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHI 239
+E GV+ ++ ++ V G +E + + G + + N ++ Y K G I
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 240 VKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTI 295
+ARK+ M DS ++ S++ EAM F +M L+G + V+ + +
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 296 LTGVSSM---DLGVQIHGWVIRRGVEWNLSIANSLI 328
++G+S D ++ + R+G + + +LI
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/396 (19%), Positives = 163/396 (41%), Gaps = 60/396 (15%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRDASAFPWNSLISGYA--QLGLYDDAIALYFQMVEEG 183
+ R+Y G E+ +FD M ++ S + ++ A + D + ++ +MV+ G
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMY---------- 233
V+ +++ V++ G +E +++ + G + N +++ Y
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 234 -------------------------PKCGHIVKARKIFNRMHRR----DSVSWNSMLTAY 264
K G + A K+F+ M R D + S+++
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 265 VHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSM-DLGVQ--IHGWVIRRGVEWNL 321
G A F ++ +G P + ++ GV + ++G + + +GV
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 322 SIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKHR-----EALALF 372
+ N+LI Y + G +D A ++++M ++ DV + N+I A C +R EA
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI--ASCFNRLKRYDEAKQWL 457
Query: 373 EQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGR 432
+M E GVK +++ +L+ G V + RL+ M+ K ++P + M+ Y +
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK-GVQPNAITYNVMIYAYCK 516
Query: 433 AGMVEKAYSIITDGIGSEAAGPTQWGALLYSCYLHG 468
G +++A + + + + P + Y+ +HG
Sbjct: 517 QGKIKEARKLRAN-MEANGMDPDSY---TYTSLIHG 548
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 130/269 (48%), Gaps = 14/269 (5%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
+ +LI+G+ + G D A L+ M + G+EPDL + ++ G+L +G ++ A+
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEV 271
G D + ++ +D+Y K G + A ++ RM + + V++ ++ G
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 272 EAMDTFCQMVLEGCKPDFVSISTILTG---VSSMDLGVQIHGWVIRRGVEWNLSIANSLI 328
EA + Q++ G +P V+ S+++ G ++ G ++ +I+ G ++ I L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 329 IAYSKHG-RLDTARWLFNLMPER---DVVSWNSIISAHC---KHREALALFEQMEEAGVK 381
SK G L R+ ++ + +VV +NS+I C + EAL +F M G+K
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 382 PDKITFVSLLSACAYLGLVNDGVRLYALM 410
PD TF +++ G + + + L+ M
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 172/386 (44%), Gaps = 30/386 (7%)
Query: 119 NVGVTSKLVRLYASFGYMEDAHDLFDQMSQR--DASAFPWNSLISGYAQLGLYDDAIALY 176
NV L+ + G M+ A DLF M QR + +++LI GY + G+ L+
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 177 FQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKC 236
Q + +GV+ D+ F + V G L V++ + G + + L+ +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 237 GHIVKARKIFNRMHRR----DSVSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSI 292
G I +A ++ ++ +R V+++S++ + G + M+ G PD V
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 293 STILTGVS-------SMDLGVQIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFN 345
++ G+S +M V++ G IR N+ + NSLI + + R D A +F
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIR----LNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 346 LMP----ERDVVSWNSIISAHC---KHREALALFEQMEEAGVKPDKITFVSLLSACAYLG 398
LM + DV ++ +++ + EAL LF +M + G++PD + + +L+ A
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Query: 399 LVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSIITDGIGSEAAGPTQWG 458
G++L+ LM ++ KI + +++L + +E A + I G +
Sbjct: 581 KPTIGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI----EGKMEPD 635
Query: 459 ALLYSCYLHGSVAIGEI-AANKLFDL 483
+ Y+ + G ++ + A ++F+L
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFEL 661
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 172/381 (45%), Gaps = 20/381 (5%)
Query: 77 IEKGIRIDPEIYASLLETCYRSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYM 136
+++G+ Y+SL++ + +R G ++ + + +V + LV + G M
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 137 EDAHDLFDQMSQRDA--SAFPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRV 194
A +M + + +NSLI G+ +L +D+A+ ++ M G++PD+ TF V
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 195 LKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRRDS 254
++V G LE + + G D L L+D + K ++F+ M +R+
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM-QRNK 596
Query: 255 VSWNSMLTAYVHHGL----EVEAMDTFCQMVLEG-CKPDFVSISTILTGVSS---MDLGV 306
+S + + V H L +E F ++EG +PD V+ +T++ G S +D
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Query: 307 QIHGWVIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMPER----DVVSWNSIISAH 362
+I + N LI K+ +D A +F++M E+ + V++ ++
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 363 CKHRE---ALALFEQMEEAGVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPI 419
K + + LFE+M+E G+ P +++ ++ G V++ ++ + K+ P
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPD 775
Query: 420 MEHHGCMVNLYGRAG-MVEKA 439
+ + ++ Y + G +VE A
Sbjct: 776 VVAYAILIRGYCKVGRLVEAA 796
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 158/368 (42%), Gaps = 54/368 (14%)
Query: 156 WNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAV 215
+N+LI+G + Y A L +MVE+G+ P++ ++ ++ V G +E+ +
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 216 RAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHR-----RDSVSWNSMLTAYVHHGLE 270
+ G + L++LV G A ++N+M R + V++N+++ + HG
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 271 VEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDLGVQIHGWVIRRGVEWNLSIANSLIIA 330
V+A+ F M GC P N+ SLI
Sbjct: 369 VKAVSVFSHMEEIGCSP--------------------------------NIRTYGSLING 396
Query: 331 YSKHGRLDTARWLFNLMPER----DVVSWNSIISAHCKH---REALALFEQMEEAGVKPD 383
++K G LD A +++N M +VV + +++ A C+H +EA +L E M + P
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 384 KITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVEKAYSII 443
TF + + G ++ +++ M ++++ P + + +++ +A +E+AY +
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 444 TDGIGSEAAGPTQWGALLYSCYLHGSVAIG------EIAANKLFDLEPDNEHNFALLMKI 497
+ +W + Y+ LHGS G ++ + D + +E +++
Sbjct: 517 REIF----MRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILA 572
Query: 498 YENAGRLE 505
Y G+ E
Sbjct: 573 YCKQGKAE 580
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 153/359 (42%), Gaps = 57/359 (15%)
Query: 126 LVRLYASFGYMEDAHDLFDQMSQRD--ASAFPWNSLISGYAQLGLYDDAIALYFQMVEEG 183
++R A G ++ L QM + S + S+IS Y Q+GL + A+ +++++ E G
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141
Query: 184 VEPDLFTFPRVLKVCAGLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKAR 243
+P + + VL G +++ V+R R GF + N L+ K + A+
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201
Query: 244 KIFNRMHRR----DSVSWNSMLTAYVHHGLEVE--------------------------- 272
K+ M + D+VS+ +++++ GL E
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHD 261
Query: 273 ---AMDTFCQMVLEGCKPDFVSIST---ILTGVSSMDLGVQIHGWVIRRGVEWNLSIANS 326
A + +MV +G P+ +S ST +L ++L +++RG N+ +S
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321
Query: 327 LIIAYSKHGRLDTARWLFNLMP-----ERDVVSWNSIISAHCKHR---EALALFEQMEEA 378
L+ G A L+N M + +VV++N+++ C H +A+++F MEE
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381
Query: 379 GVKPDKITFVSLLSACAYLGLVNDGVRLYALMTEKYKIKPIMEHHGCMVNLYGRAGMVE 437
G P+ T+ SL++ A G ++ V ++ M GC N+ MVE
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS----------GCCPNVVVYTNMVE 430
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 146/331 (44%), Gaps = 22/331 (6%)
Query: 85 PEIY--ASLLETCY-RSQAIRHGSQVHRLIPTVLLRKNVGVTSKLVRLYASFGYMEDAHD 141
P IY +SL++ C+ R +++I L+ NV + LV+ + S G + A
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVS 373
Query: 142 LFDQMSQRDASA--FPWNSLISGYAQLGLYDDAIALYFQMVEEGVEPDLFTFPRVLKVCA 199
+F M + S + SLI+G+A+ G D A+ ++ +M+ G P++ + +++
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Query: 200 GLGLLEVGEEVHRHAVRAGFGNDGLGLNALVDMYPKCGHIVKARKIFNRMHRR-----DS 254
+ E + + NA + G + A K+F +M ++ +
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNI 493
Query: 255 VSWNSMLTAYVHHGLEVEAMDTFCQMVLEGCKPDFVSISTILTGVSSMDL---GVQIHGW 311
V++N +L EA ++ + G + + +T+L G + L +Q+ G
Sbjct: 494 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGK 553
Query: 312 VIRRGVEWNLSIANSLIIAYSKHGRLDTARWLFNLMP------ERDVVSWNSIISAHCK- 364
++ G + N +I+AY K G+ + A + +L+ DV+S+ ++I C+
Sbjct: 554 MMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRS 613
Query: 365 --HREALALFEQMEEAGVKPDKITFVSLLSA 393
+ + L E+M AG+ P T+ L++
Sbjct: 614 NCREDGVILLERMISAGIVPSIATWSVLINC 644