Miyakogusa Predicted Gene
- Lj3g3v3725550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3725550.1 Non Chatacterized Hit- tr|I1L5P7|I1L5P7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33422
PE,86.29,0,KH_TYPE_1,K Homology domain, type 1; RRM,RNA recognition
motif domain; ZF_CCHC,Zinc finger, CCHC-typ,CUFF.46235.1
(632 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G51300.3 | Symbols: | splicing factor-related | chr5:2084988... 713 0.0
AT5G51300.2 | Symbols: | splicing factor-related | chr5:2084988... 713 0.0
AT5G51300.1 | Symbols: | splicing factor-related | chr5:2084988... 713 0.0
AT1G09660.1 | Symbols: | RNA-binding KH domain-containing prote... 118 1e-26
AT3G08620.1 | Symbols: | RNA-binding KH domain-containing prote... 107 2e-23
AT2G38610.2 | Symbols: | RNA-binding KH domain-containing prote... 107 3e-23
AT2G38610.1 | Symbols: | RNA-binding KH domain-containing prote... 107 3e-23
AT4G26480.1 | Symbols: | RNA-binding KH domain-containing prote... 105 9e-23
AT5G56140.1 | Symbols: | RNA-binding KH domain-containing prote... 105 1e-22
AT1G09660.2 | Symbols: | RNA-binding KH domain-containing prote... 84 3e-16
AT3G32940.1 | Symbols: | RNA-binding KH domain-containing prote... 84 3e-16
AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RN... 72 1e-12
AT3G26420.1 | Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs... 70 3e-12
AT1G03457.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 67 3e-11
AT1G18630.1 | Symbols: GR-RBP6 | glycine-rich RNA-binding protei... 67 4e-11
AT1G03457.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 67 4e-11
AT5G50250.1 | Symbols: CP31B | chloroplast RNA-binding protein 3... 67 5e-11
AT5G54580.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 67 5e-11
AT4G13860.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 66 6e-11
AT5G61030.1 | Symbols: GR-RBP3 | glycine-rich RNA-binding protei... 65 1e-10
AT3G23830.2 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding ... 64 2e-10
AT3G23830.1 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding ... 64 2e-10
AT2G37220.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 64 3e-10
AT4G39260.2 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 64 4e-10
AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 64 4e-10
AT5G47320.1 | Symbols: RPS19 | ribosomal protein S19 | chr5:1920... 64 5e-10
AT2G21660.2 | Symbols: ATGRP7, CCR2 | cold, circadian rhythm, an... 63 6e-10
AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold, circa... 63 6e-10
AT4G39260.3 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 63 6e-10
AT4G03110.1 | Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding protein-... 63 6e-10
AT4G13850.4 | Symbols: ATGRP2 | glycine-rich RNA-binding protein... 63 6e-10
AT4G13850.3 | Symbols: ATGRP2 | glycine-rich RNA-binding protein... 62 1e-09
AT4G13850.2 | Symbols: ATGRP2 | glycine-rich RNA-binding protein... 62 1e-09
AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | glycine-rich RNA-... 62 1e-09
AT3G47120.1 | Symbols: | RNA recognition motif (RRM)-containing... 61 3e-09
AT5G53680.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 60 3e-09
AT3G53460.3 | Symbols: CP29 | chloroplast RNA-binding protein 29... 59 7e-09
AT3G53460.2 | Symbols: CP29 | chloroplast RNA-binding protein 29... 59 7e-09
AT3G53460.1 | Symbols: CP29 | chloroplast RNA-binding protein 29... 59 7e-09
AT5G06210.1 | Symbols: | RNA binding (RRM/RBD/RNP motifs) famil... 59 8e-09
AT3G53460.4 | Symbols: CP29 | chloroplast RNA-binding protein 29... 59 8e-09
AT1G60000.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 58 2e-08
AT5G53720.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 3e-08
AT5G40490.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 3e-08
AT1G74230.1 | Symbols: GR-RBP5 | glycine-rich RNA-binding protei... 57 3e-08
AT4G36690.1 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor, l... 57 4e-08
AT4G36690.4 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor, l... 57 4e-08
AT5G04280.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 4e-08
AT4G36690.3 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor, l... 57 4e-08
AT1G49760.2 | Symbols: PAB8 | poly(A) binding protein 8 | chr1:1... 57 5e-08
AT1G49760.1 | Symbols: PAB8, PABP8 | poly(A) binding protein 8 |... 57 5e-08
AT3G04500.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 57 5e-08
AT4G36690.2 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor, l... 57 5e-08
AT3G52380.1 | Symbols: CP33, PDE322 | chloroplast RNA-binding pr... 57 5e-08
AT2G46780.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 56 8e-08
AT5G11412.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 56 9e-08
AT2G16940.1 | Symbols: | Splicing factor, CC1-like | chr2:73428... 55 1e-07
AT2G16940.3 | Symbols: | Splicing factor, CC1-like | chr2:73428... 55 1e-07
AT2G18510.1 | Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs... 55 1e-07
AT1G01080.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 55 1e-07
AT2G16940.2 | Symbols: | Splicing factor, CC1-like | chr2:73428... 55 1e-07
AT5G47620.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 55 2e-07
AT5G47620.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 55 2e-07
AT5G47620.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 55 2e-07
AT1G01080.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 55 2e-07
AT1G47490.2 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47... 55 2e-07
AT3G14100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 55 2e-07
AT4G27000.1 | Symbols: ATRBP45C | RNA-binding (RRM/RBD/RNP motif... 54 2e-07
AT5G54900.1 | Symbols: ATRBP45A, RBP45A | RNA-binding protein 45... 54 2e-07
AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47... 54 3e-07
AT2G23350.1 | Symbols: PAB4, PABP4 | poly(A) binding protein 4 |... 54 4e-07
AT3G07810.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 4e-07
AT3G07810.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 54 5e-07
AT1G60900.1 | Symbols: | U2 snRNP auxilliary factor, large subu... 53 5e-07
AT4G00830.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 5e-07
AT4G00830.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 5e-07
AT1G22330.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 5e-07
AT4G00830.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 5e-07
AT4G26650.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 6e-07
AT2G37510.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 6e-07
AT4G26650.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 7e-07
AT5G19350.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 8e-07
AT5G19350.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 53 8e-07
AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein 1A... 52 9e-07
AT1G47500.1 | Symbols: ATRBP47C', RBP47C' | RNA-binding protein ... 52 1e-06
AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation... 52 1e-06
AT5G09880.1 | Symbols: | Splicing factor, CC1-like | chr5:30816... 52 1e-06
AT4G39260.4 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circa... 52 1e-06
AT5G55550.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 1e-06
AT5G55550.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 1e-06
AT5G55550.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 1e-06
AT5G55550.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 52 1e-06
AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding pro... 52 1e-06
AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation... 52 2e-06
AT1G49600.1 | Symbols: ATRBP47A, RBP47A | RNA-binding protein 47... 51 2e-06
AT1G78260.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 51 3e-06
AT1G76460.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 50 4e-06
AT3G52150.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 50 4e-06
AT3G52150.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) famil... 50 4e-06
>AT5G51300.3 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE LENGTH=804
Length = 804
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/449 (77%), Positives = 377/449 (83%), Gaps = 4/449 (0%)
Query: 2 GGIEFDPEIQALNSRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRAR 61
GGIEFDPEIQALNSRLLEISRMLQSG+PLDDRPEG RSPSPEP+YDNMGIRINTREYRAR
Sbjct: 150 GGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRAR 209
Query: 62 ERLQKERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQ 121
ERL +ERQEII+QIIKKNPAFKPPADYRPPKL KKL+IPMKE+PGYNFIGLIIGPRGNTQ
Sbjct: 210 ERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQ 269
Query: 122 KRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEAETPDALEAAAGMVE 181
KRME+ETGAKIVIRGKGSVKEGR QQK+DLK DPSENEDLHVLVEAET +ALEAAAGMVE
Sbjct: 270 KRMERETGAKIVIRGKGSVKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVE 329
Query: 182 KLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEVVC 241
KLLQPVDEVLNEHKRQQLRELA LNGTIRDEE+CRLCGEPGHRQYACP+RT+TFKS+V+C
Sbjct: 330 KLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRLCGEPGHRQYACPSRTNTFKSDVLC 389
Query: 242 KHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESATKQTSTLAIGSGNSGSNP 301
K CGDGGHP+IDCPVKG TGKKMDDEYQNFLAELGGTVPES+ KQ++TLA+G G+SGSNP
Sbjct: 390 KICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGTVPESSLKQSATLALGPGSSGSNP 449
Query: 302 PWXXXXXXXXXXX-XXXXXXXXXVKKEIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMA 360
PW KE D+TNLYIG+LPP LEDDGLI LF FGEIVMA
Sbjct: 450 PWANNAGNGASAHPGLGSTPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMA 509
Query: 361 KVIKDRMTGLSKGYGFVKYADITMANNAILAMNGYRLEGRTIAVRXXXXXXXXXXXXXXX 420
KVIKDR+TGLSKGYGFVKYAD+ MAN A+ AMNGYR EGRT+AVR
Sbjct: 510 KVIKDRVTGLSKGYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPPPIAPPGPP 569
Query: 421 XXXXXXXXVP--SQPHGAYPSQQQYAAGG 447
P +QP GAYPS QQYA GG
Sbjct: 570 APQPPTQGYPPSNQPPGAYPS-QQYATGG 597
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 37/151 (24%)
Query: 512 TSNEQQSYPPGVQSDNSTSTQSIPASMYGNTVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 571
+S QQS+PPGVQ+D+ +T SIP ++YG++V
Sbjct: 661 SSEPQQSFPPGVQADSGAATSSIPPNVYGSSVTAMPGQPPYMSYPSYYNAVPPPTPPAPA 720
Query: 572 XXXXXTSEQSPSFGNVPWASNPMVPPPPSDNQSQ-------------------------- 605
+++ S + GN+PWA+NP V P + SQ
Sbjct: 721 S----STDHSQNMGNMPWANNPSVSTP---DHSQGLVNAPWAPNPPMPPTVGYSQSMGNV 773
Query: 606 PRATNPPL-PPA---SSAGDSEYEKFMAEMK 632
P A PP+ PPA SS G+SEYEKFMAEMK
Sbjct: 774 PWAPKPPVQPPAENPSSVGESEYEKFMAEMK 804
>AT5G51300.2 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE LENGTH=804
Length = 804
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/449 (77%), Positives = 377/449 (83%), Gaps = 4/449 (0%)
Query: 2 GGIEFDPEIQALNSRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRAR 61
GGIEFDPEIQALNSRLLEISRMLQSG+PLDDRPEG RSPSPEP+YDNMGIRINTREYRAR
Sbjct: 150 GGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRAR 209
Query: 62 ERLQKERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQ 121
ERL +ERQEII+QIIKKNPAFKPPADYRPPKL KKL+IPMKE+PGYNFIGLIIGPRGNTQ
Sbjct: 210 ERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQ 269
Query: 122 KRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEAETPDALEAAAGMVE 181
KRME+ETGAKIVIRGKGSVKEGR QQK+DLK DPSENEDLHVLVEAET +ALEAAAGMVE
Sbjct: 270 KRMERETGAKIVIRGKGSVKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVE 329
Query: 182 KLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEVVC 241
KLLQPVDEVLNEHKRQQLRELA LNGTIRDEE+CRLCGEPGHRQYACP+RT+TFKS+V+C
Sbjct: 330 KLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRLCGEPGHRQYACPSRTNTFKSDVLC 389
Query: 242 KHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESATKQTSTLAIGSGNSGSNP 301
K CGDGGHP+IDCPVKG TGKKMDDEYQNFLAELGGTVPES+ KQ++TLA+G G+SGSNP
Sbjct: 390 KICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGTVPESSLKQSATLALGPGSSGSNP 449
Query: 302 PWXXXXXXXXXXX-XXXXXXXXXVKKEIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMA 360
PW KE D+TNLYIG+LPP LEDDGLI LF FGEIVMA
Sbjct: 450 PWANNAGNGASAHPGLGSTPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMA 509
Query: 361 KVIKDRMTGLSKGYGFVKYADITMANNAILAMNGYRLEGRTIAVRXXXXXXXXXXXXXXX 420
KVIKDR+TGLSKGYGFVKYAD+ MAN A+ AMNGYR EGRT+AVR
Sbjct: 510 KVIKDRVTGLSKGYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPPPIAPPGPP 569
Query: 421 XXXXXXXXVP--SQPHGAYPSQQQYAAGG 447
P +QP GAYPS QQYA GG
Sbjct: 570 APQPPTQGYPPSNQPPGAYPS-QQYATGG 597
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 37/151 (24%)
Query: 512 TSNEQQSYPPGVQSDNSTSTQSIPASMYGNTVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 571
+S QQS+PPGVQ+D+ +T SIP ++YG++V
Sbjct: 661 SSEPQQSFPPGVQADSGAATSSIPPNVYGSSVTAMPGQPPYMSYPSYYNAVPPPTPPAPA 720
Query: 572 XXXXXTSEQSPSFGNVPWASNPMVPPPPSDNQSQ-------------------------- 605
+++ S + GN+PWA+NP V P + SQ
Sbjct: 721 S----STDHSQNMGNMPWANNPSVSTP---DHSQGLVNAPWAPNPPMPPTVGYSQSMGNV 773
Query: 606 PRATNPPL-PPA---SSAGDSEYEKFMAEMK 632
P A PP+ PPA SS G+SEYEKFMAEMK
Sbjct: 774 PWAPKPPVQPPAENPSSVGESEYEKFMAEMK 804
>AT5G51300.1 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE LENGTH=804
Length = 804
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/449 (77%), Positives = 377/449 (83%), Gaps = 4/449 (0%)
Query: 2 GGIEFDPEIQALNSRLLEISRMLQSGLPLDDRPEGARSPSPEPIYDNMGIRINTREYRAR 61
GGIEFDPEIQALNSRLLEISRMLQSG+PLDDRPEG RSPSPEP+YDNMGIRINTREYRAR
Sbjct: 150 GGIEFDPEIQALNSRLLEISRMLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRAR 209
Query: 62 ERLQKERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQ 121
ERL +ERQEII+QIIKKNPAFKPPADYRPPKL KKL+IPMKE+PGYNFIGLIIGPRGNTQ
Sbjct: 210 ERLNRERQEIIAQIIKKNPAFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQ 269
Query: 122 KRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEAETPDALEAAAGMVE 181
KRME+ETGAKIVIRGKGSVKEGR QQK+DLK DPSENEDLHVLVEAET +ALEAAAGMVE
Sbjct: 270 KRMERETGAKIVIRGKGSVKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVE 329
Query: 182 KLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPTRTSTFKSEVVC 241
KLLQPVDEVLNEHKRQQLRELA LNGTIRDEE+CRLCGEPGHRQYACP+RT+TFKS+V+C
Sbjct: 330 KLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRLCGEPGHRQYACPSRTNTFKSDVLC 389
Query: 242 KHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESATKQTSTLAIGSGNSGSNP 301
K CGDGGHP+IDCPVKG TGKKMDDEYQNFLAELGGTVPES+ KQ++TLA+G G+SGSNP
Sbjct: 390 KICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGTVPESSLKQSATLALGPGSSGSNP 449
Query: 302 PWXXXXXXXXXXX-XXXXXXXXXVKKEIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMA 360
PW KE D+TNLYIG+LPP LEDDGLI LF FGEIVMA
Sbjct: 450 PWANNAGNGASAHPGLGSTPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMA 509
Query: 361 KVIKDRMTGLSKGYGFVKYADITMANNAILAMNGYRLEGRTIAVRXXXXXXXXXXXXXXX 420
KVIKDR+TGLSKGYGFVKYAD+ MAN A+ AMNGYR EGRT+AVR
Sbjct: 510 KVIKDRVTGLSKGYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPPPIAPPGPP 569
Query: 421 XXXXXXXXVP--SQPHGAYPSQQQYAAGG 447
P +QP GAYPS QQYA GG
Sbjct: 570 APQPPTQGYPPSNQPPGAYPS-QQYATGG 597
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 37/151 (24%)
Query: 512 TSNEQQSYPPGVQSDNSTSTQSIPASMYGNTVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 571
+S QQS+PPGVQ+D+ +T SIP ++YG++V
Sbjct: 661 SSEPQQSFPPGVQADSGAATSSIPPNVYGSSVTAMPGQPPYMSYPSYYNAVPPPTPPAPA 720
Query: 572 XXXXXTSEQSPSFGNVPWASNPMVPPPPSDNQSQ-------------------------- 605
+++ S + GN+PWA+NP V P + SQ
Sbjct: 721 S----STDHSQNMGNMPWANNPSVSTP---DHSQGLVNAPWAPNPPMPPTVGYSQSMGNV 773
Query: 606 PRATNPPL-PPA---SSAGDSEYEKFMAEMK 632
P A PP+ PPA SS G+SEYEKFMAEMK
Sbjct: 774 PWAPKPPVQPPAENPSSVGESEYEKFMAEMK 804
>AT1G09660.1 | Symbols: | RNA-binding KH domain-containing protein
| chr1:3128032-3130791 REVERSE LENGTH=298
Length = 298
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 8/131 (6%)
Query: 90 PPKLQK--KLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQ 147
PP ++K +L +P+ +YP YNF+G I+GPRGN+ KR+E T ++ IRG+GSVK+ ++
Sbjct: 142 PPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEE 201
Query: 148 KRDLKPDPSE-NEDLHVLVEAETPD-----ALEAAAGMVEKLLQPVDEVLNEHKRQQLRE 201
K KP E LHVL+EAE P+ LE A +E LL+P+DE ++ +KR+QL+E
Sbjct: 202 KLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKE 261
Query: 202 LAALNGTIRDE 212
LAALNGT+R+E
Sbjct: 262 LAALNGTLREE 272
>AT3G08620.1 | Symbols: | RNA-binding KH domain-containing protein
| chr3:2617925-2620314 FORWARD LENGTH=283
Length = 283
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 86/133 (64%), Gaps = 7/133 (5%)
Query: 85 PADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGR 144
P+ Y P K +L +P+ YP +NF+G ++GPRGN+ KR+E TG ++ IRGKGS+K+
Sbjct: 128 PSSY-PVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPE 186
Query: 145 LQQKRDLKPDPSE-NEDLHVLVEAETP-----DALEAAAGMVEKLLQPVDEVLNEHKRQQ 198
++K KP NE LH+L+EA+ P L A ++E+L++PVDE + KRQQ
Sbjct: 187 KEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQ 246
Query: 199 LRELAALNGTIRD 211
LRELA LN +R+
Sbjct: 247 LRELALLNSNLRE 259
>AT2G38610.2 | Symbols: | RNA-binding KH domain-containing protein
| chr2:16147552-16149638 REVERSE LENGTH=286
Length = 286
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
Query: 96 KLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDP 155
+L IP+ YP +NF+G ++GPRGN+ KR+E TG ++ IRGKGS+K+ + K +P
Sbjct: 139 RLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGY 198
Query: 156 SE-NEDLHVLVEAETPDA-----LEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTI 209
NE LH+L+EA+ P + L A ++E+LL+PVDE + KRQQLRELA LN
Sbjct: 199 EHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNN 258
Query: 210 RDEE 213
EE
Sbjct: 259 LREE 262
>AT2G38610.1 | Symbols: | RNA-binding KH domain-containing protein
| chr2:16147552-16149638 REVERSE LENGTH=286
Length = 286
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
Query: 96 KLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDP 155
+L IP+ YP +NF+G ++GPRGN+ KR+E TG ++ IRGKGS+K+ + K +P
Sbjct: 139 RLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGY 198
Query: 156 SE-NEDLHVLVEAETPDA-----LEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTI 209
NE LH+L+EA+ P + L A ++E+LL+PVDE + KRQQLRELA LN
Sbjct: 199 EHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNN 258
Query: 210 RDEE 213
EE
Sbjct: 259 LREE 262
>AT4G26480.1 | Symbols: | RNA-binding KH domain-containing protein
| chr4:13372885-13375793 REVERSE LENGTH=308
Length = 308
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 84/123 (68%), Gaps = 6/123 (4%)
Query: 96 KLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDP 155
++ IP+ +YP YNF+G ++GPRGN+ KR+E T +++IRG+GS+K+ + KP
Sbjct: 163 RVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGY 222
Query: 156 SE-NEDLHVLVEAETP----DA-LEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTI 209
NE LH+LVEAE P DA L A +++ LL PV+E + +K+QQLRELA LNG++
Sbjct: 223 EHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGSL 282
Query: 210 RDE 212
R+E
Sbjct: 283 REE 285
>AT5G56140.1 | Symbols: | RNA-binding KH domain-containing protein
| chr5:22725462-22727932 FORWARD LENGTH=315
Length = 315
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 84/123 (68%), Gaps = 6/123 (4%)
Query: 96 KLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDP 155
++ IP+ YP +NF+G ++GPRGN+ KR+E T +++IRG+GS+K+ ++ KP
Sbjct: 169 RVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGY 228
Query: 156 SE-NEDLHVLVEAETP----DA-LEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTI 209
NE LH+LVEAE P DA L A +++ LL P++E + +K+QQLRELA LNGT+
Sbjct: 229 EHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTL 288
Query: 210 RDE 212
R+E
Sbjct: 289 REE 291
>AT1G09660.2 | Symbols: | RNA-binding KH domain-containing protein
| chr1:3128205-3130791 REVERSE LENGTH=264
Length = 264
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 10/114 (8%)
Query: 90 PPKLQK--KLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQ 147
PP ++K +L +P+ +YP YNF+G I+GPRGN+ KR+E T ++ IRG+GSVK+ ++
Sbjct: 142 PPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEE 201
Query: 148 KRDLKPDPSE-NEDLHVLVEAETPD-----ALEAAAGMVEKLLQPVDEVLNEHK 195
K KP E LHVL+EAE P+ LE A +E LL+P+ V + HK
Sbjct: 202 KLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPM--VHSYHK 253
>AT3G32940.1 | Symbols: | RNA-binding KH domain-containing protein
| chr3:13491089-13493630 REVERSE LENGTH=607
Length = 607
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 12/133 (9%)
Query: 61 RERLQKERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNT 120
R L+ E++E I +I++ NP +K P DY+P + +L I +KE+ ++F+ LI G +G+T
Sbjct: 101 RTDLEFEKREAIGEILELNPRYKAPPDYKPLLKEARLPIDVKEHSDFSFLSLIFGSQGDT 160
Query: 121 QKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENE------DLHVLVEAETPDALE 174
QKR+EKETGAK+ I G + E K +L P ENE +L+ + ++T + ++
Sbjct: 161 QKRLEKETGAKVQIFGTKTGGE-----KVELSPS-DENEIQKSWQELYFQISSDTYEKVD 214
Query: 175 AAAGMVEKLLQPV 187
AA +VE L+ V
Sbjct: 215 AAIAVVELLMSSV 227
>AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RNA
binding protein | chr4:12766223-12767952 REVERSE
LENGTH=329
Length = 329
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+Y+G LP +++ L QLF + G++V A+V+ DR TG S+G+GFV +D+ N AI A+
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 393 NGYRLEGRTIAV 404
+G LEGR I V
Sbjct: 306 DGQNLEGRAIRV 317
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 329 DDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
++ L++G L + L LF+Q G + +A+VI +R T S+G+GFV + + A A
Sbjct: 148 EEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETA 207
Query: 389 ILAMNGYRLEGRTIAV 404
+ N Y L GR + V
Sbjct: 208 VEKFNRYDLNGRLLTV 223
>AT3G26420.1 | Symbols: ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs)
family protein with retrovirus zinc finger-like domain |
chr3:9671953-9673055 FORWARD LENGTH=245
Length = 245
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+IG L T D GL F+++G +V AKV+ D+ +G S+G+GF+ + + + AI AM
Sbjct: 9 CFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAM 68
Query: 393 NGYRLEGRTIAV 404
NG L+GRTI V
Sbjct: 69 NGMDLDGRTITV 80
>AT1G03457.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:861109-864019 REVERSE LENGTH=438
Length = 438
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 332 NLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILA 391
NL+I +P ED L FQ FG+++ AKV D+ TG+SK +GF+ Y A NAI
Sbjct: 340 NLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINT 399
Query: 392 MNGYRLEGRTIAVR 405
MNG +L G+ + V+
Sbjct: 400 MNGCQLSGKKLKVQ 413
>AT1G18630.1 | Symbols: GR-RBP6 | glycine-rich RNA-binding protein 6
| chr1:6415226-6416283 FORWARD LENGTH=155
Length = 155
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
+ +++G L P+ + + L + F FG+IV A V+ DR +GLS+G+GFV Y I +ANNA+
Sbjct: 36 SKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQ 95
Query: 391 AMNGYRLEGRTIAV 404
AM L+GR I V
Sbjct: 96 AMQNKELDGRIIGV 109
>AT1G03457.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:861109-864019 REVERSE LENGTH=429
Length = 429
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 332 NLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILA 391
NL+I +P ED L FQ FG+++ AKV D+ TG+SK +GF+ Y A NAI
Sbjct: 331 NLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINT 390
Query: 392 MNGYRLEGRTIAVR 405
MNG +L G+ + V+
Sbjct: 391 MNGCQLSGKKLKVQ 404
>AT5G50250.1 | Symbols: CP31B | chloroplast RNA-binding protein 31B
| chr5:20452677-20453965 REVERSE LENGTH=289
Length = 289
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+Y+G LP ++ L +LF + G++V A+V+ DR TG S+G+GFV+ ++ N AI A+
Sbjct: 209 IYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAAL 268
Query: 393 NGYRLEGRTIAV 404
+G LEGR I V
Sbjct: 269 DGQNLEGRAIKV 280
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 329 DDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
++ L++G LP ++ L LF+Q G + +++VI +R T S+G+GFV + + A A
Sbjct: 111 EEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKA 170
Query: 389 ILAMNGYRLEGRTIAV 404
+ N + + GR + V
Sbjct: 171 VEKFNSFEVNGRRLTV 186
>AT5G54580.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22171332-22172656 FORWARD LENGTH=156
Length = 156
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAI 389
TNL++ L +GL F QFGE+ AKV+ DR++G SKG+GFV+YA + + I
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGI 114
Query: 390 LAMNGYRLEGRTI 402
M+G L+G I
Sbjct: 115 AGMDGKFLDGWVI 127
>AT4G13860.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:8022601-8023162 FORWARD LENGTH=87
Length = 87
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
T +Y+G L PT DD L + F +G +V A V++DR T S+G+GFV Y+ + A A+
Sbjct: 3 TRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVS 62
Query: 391 AMNGYRLEGRTIAVR 405
M+G L GR ++V+
Sbjct: 63 GMDGKELNGRRVSVK 77
>AT5G61030.1 | Symbols: GR-RBP3 | glycine-rich RNA-binding protein 3
| chr5:24560870-24562152 FORWARD LENGTH=309
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%)
Query: 328 IDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANN 387
+ + L+IG + ++++D L + F ++GE+V +VI DR TG S+G+GFV + A++
Sbjct: 37 MSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASS 96
Query: 388 AILAMNGYRLEGRTIAV 404
AI A++G L GR + V
Sbjct: 97 AIQALDGRDLHGRVVKV 113
>AT3G23830.2 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding
protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136
Length = 136
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
+ L++G L +D L Q F FGE+ A VI DR TG S+G+GFV ++ ANNAI
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 391 AMNGYRLEGRTIAV 404
M+G L GR I V
Sbjct: 95 EMDGKELNGRQIRV 108
>AT3G23830.1 | Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding
protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136
Length = 136
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
+ L++G L +D L Q F FGE+ A VI DR TG S+G+GFV ++ ANNAI
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94
Query: 391 AMNGYRLEGRTIAV 404
M+G L GR I V
Sbjct: 95 EMDGKELNGRQIRV 108
>AT2G37220.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:15634980-15636331 REVERSE LENGTH=289
Length = 289
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAI 389
D L++G LP ++ L QLF+ G + M +VI D++TG S+G+GFV + ++ A
Sbjct: 90 DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAA 149
Query: 390 LAMNGYRLEGRTIAV 404
NGY L+GR + V
Sbjct: 150 QQFNGYELDGRPLRV 164
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+Y+G L ++D L LF + G++V A+VI DR +G SKG+GFV Y NAI ++
Sbjct: 206 VYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSL 265
Query: 393 NGYRLEGRTIAV 404
+G L+GR I V
Sbjct: 266 DGADLDGRQIRV 277
>AT4G39260.2 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=126
Length = 126
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 334 YIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAMN 393
++G L D+ L + F QFG+++ +K+I DR +G S+G+GFV + D +AI MN
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
Query: 394 GYRLEGRTIAV 404
G L+GR I V
Sbjct: 69 GKELDGRVITV 79
>AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=169
Length = 169
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 334 YIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAMN 393
++G L D+ L + F QFG+++ +K+I DR +G S+G+GFV + D +AI MN
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
Query: 394 GYRLEGRTIAV 404
G L+GR I V
Sbjct: 69 GKELDGRVITV 79
>AT5G47320.1 | Symbols: RPS19 | ribosomal protein S19 |
chr5:19203801-19204951 FORWARD LENGTH=212
Length = 212
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
T LYIG L P ++ L F F + A+V+ +++TG S+GYGFV + AN+AI
Sbjct: 31 TKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAIS 90
Query: 391 AMNGYRLEGRTIAV 404
AMNG L G I+V
Sbjct: 91 AMNGQELNGFNISV 104
>AT2G21660.2 | Symbols: ATGRP7, CCR2 | cold, circadian rhythm, and
rna binding 2 | chr2:9265477-9266316 REVERSE LENGTH=159
Length = 159
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 334 YIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAMN 393
++G L +D L F Q+G+++ +K+I DR TG S+G+GFV + D +AI MN
Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70
Query: 394 GYRLEGRTIAV 404
G L+GR+I V
Sbjct: 71 GQDLDGRSITV 81
>AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold,
circadian rhythm, and rna binding 2 |
chr2:9265477-9266316 REVERSE LENGTH=176
Length = 176
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 334 YIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAMN 393
++G L +D L F Q+G+++ +K+I DR TG S+G+GFV + D +AI MN
Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70
Query: 394 GYRLEGRTIAV 404
G L+GR+I V
Sbjct: 71 GQDLDGRSITV 81
>AT4G39260.3 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=92
Length = 92
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 334 YIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAMN 393
++G L D+ L + F QFG+++ +K+I DR +G S+G+GFV + D +AI MN
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
Query: 394 GYRLEGRTIAV 404
G L+GR I V
Sbjct: 69 GKELDGRVITV 79
>AT4G03110.1 | Symbols: AtRBP-DR1, RBP-DR1 | RNA-binding
protein-defense related 1 | chr4:1376612-1379275 REVERSE
LENGTH=441
Length = 441
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 329 DDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
+ NL+I +P D L FQ FG ++ AKV D+ TG+SK +GFV Y A NA
Sbjct: 347 EGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNA 406
Query: 389 ILAMNGYRLEGRTIAVR 405
I MNG L G+ + V+
Sbjct: 407 IDMMNGRHLGGKKLKVQ 423
>AT4G13850.4 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
| chr4:8021314-8022065 FORWARD LENGTH=129
Length = 129
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 43/74 (58%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
T L+IG L +D L F FG++V AKVI DR TG S+G+GFV + D A AI
Sbjct: 35 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94
Query: 391 AMNGYRLEGRTIAV 404
M+G L GR I V
Sbjct: 95 EMDGKELNGRHIRV 108
>AT4G13850.3 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
| chr4:8021314-8022065 FORWARD LENGTH=144
Length = 144
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 43/74 (58%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
T L+IG L +D L F FG++V AKVI DR TG S+G+GFV + D A AI
Sbjct: 35 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94
Query: 391 AMNGYRLEGRTIAV 404
M+G L GR I V
Sbjct: 95 EMDGKELNGRHIRV 108
>AT4G13850.2 | Symbols: ATGRP2 | glycine-rich RNA-binding protein 2
| chr4:8021314-8022065 FORWARD LENGTH=153
Length = 153
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 43/74 (58%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
T L+IG L +D L F FG++V AKVI DR TG S+G+GFV + D A AI
Sbjct: 35 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94
Query: 391 AMNGYRLEGRTIAV 404
M+G L GR I V
Sbjct: 95 EMDGKELNGRHIRV 108
>AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | glycine-rich
RNA-binding protein 2 | chr4:8021314-8022065 FORWARD
LENGTH=158
Length = 158
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 43/74 (58%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
T L+IG L +D L F FG++V AKVI DR TG S+G+GFV + D A AI
Sbjct: 35 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94
Query: 391 AMNGYRLEGRTIAV 404
M+G L GR I V
Sbjct: 95 EMDGKELNGRHIRV 108
>AT3G47120.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:17351334-17352769 REVERSE LENGTH=352
Length = 352
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+Y+G +P L + L+ +F Q+GEIV +I+D+ TG SKG+ F+ Y D A+ +
Sbjct: 38 VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97
Query: 393 NGYRLEGRTIAV 404
NG + GRTI V
Sbjct: 98 NGALVLGRTIKV 109
>AT5G53680.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:21798382-21799109 FORWARD LENGTH=169
Length = 169
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
T +Y+G LP T +GLI F++FGEI+ V+ DR T S+GYGFV + D A A
Sbjct: 13 TKIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKDAESATRA 70
>AT3G53460.3 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=342
Length = 342
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
LY+G L ++D L LF + G++V A+VI DR +G SKG+GFV + AI ++
Sbjct: 259 LYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSL 318
Query: 393 NGYRLEGRTIAV 404
NG L+GR I V
Sbjct: 319 NGADLDGRQIRV 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAI 389
D L++G L ++ L QLF+ G + M +VI D++TG S+G+GFV + A
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 157
Query: 390 LAMNGYRLEGRTIAV 404
NGY EGR + V
Sbjct: 158 QQFNGYEFEGRPLRV 172
>AT3G53460.2 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=342
Length = 342
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
LY+G L ++D L LF + G++V A+VI DR +G SKG+GFV + AI ++
Sbjct: 259 LYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSL 318
Query: 393 NGYRLEGRTIAV 404
NG L+GR I V
Sbjct: 319 NGADLDGRQIRV 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAI 389
D L++G L ++ L QLF+ G + M +VI D++TG S+G+GFV + A
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 157
Query: 390 LAMNGYRLEGRTIAV 404
NGY EGR + V
Sbjct: 158 QQFNGYEFEGRPLRV 172
>AT3G53460.1 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=342
Length = 342
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
LY+G L ++D L LF + G++V A+VI DR +G SKG+GFV + AI ++
Sbjct: 259 LYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSL 318
Query: 393 NGYRLEGRTIAV 404
NG L+GR I V
Sbjct: 319 NGADLDGRQIRV 330
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAI 389
D L++G L ++ L QLF+ G + M +VI D++TG S+G+GFV + A
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAA 157
Query: 390 LAMNGYRLEGRTIAV 404
NGY EGR + V
Sbjct: 158 QQFNGYEFEGRPLRV 172
>AT5G06210.1 | Symbols: | RNA binding (RRM/RBD/RNP motifs) family
protein | chr5:1878497-1879515 FORWARD LENGTH=146
Length = 146
Score = 59.3 bits (142), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
+ L+IG L + GL + F + G++V A+++ DR++ SKG+GFV +A A A++
Sbjct: 34 SKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALM 93
Query: 391 AMNGYRLEGRTIAV 404
NG +L GRTI V
Sbjct: 94 EFNGQQLNGRTIFV 107
>AT3G53460.4 | Symbols: CP29 | chloroplast RNA-binding protein 29 |
chr3:19819738-19821423 REVERSE LENGTH=363
Length = 363
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
LY+G L ++D L LF + G++V A+VI DR +G SKG+GFV + AI ++
Sbjct: 280 LYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSL 339
Query: 393 NGYRLEGRTIAV 404
NG L+GR I V
Sbjct: 340 NGADLDGRQIRV 351
>AT1G60000.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:22093678-22094540 REVERSE LENGTH=258
Length = 258
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
L++G L T+ + L F++ G++V A+V+ D TG S+GYGFV Y+ A+ ++
Sbjct: 179 LFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESL 238
Query: 393 NGYRLEGRTIAV 404
+G+ LEGR I V
Sbjct: 239 DGFELEGRAIRV 250
>AT5G53720.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:21806622-21807012 FORWARD LENGTH=100
Length = 100
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAI 389
+T +Y+ LP +GLI F++FGEIV AKV+ D T SKG+GFV + ++ A A
Sbjct: 8 ETKIYVAGLPWITRTEGLISYFERFGEIVYAKVVCDGATQRSKGFGFVTFREVESATRAC 67
Query: 390 LAMNGYRLEGRTI 402
N + ++GRT+
Sbjct: 68 ENPN-HTIDGRTV 79
>AT5G40490.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:16225483-16227423 FORWARD LENGTH=423
Length = 423
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+++G +P +++DD + F QFGE+ ++++D TG S+G+GFV Y M ++ +
Sbjct: 132 IFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKG 191
Query: 393 NGYRLEGRTIAVR 405
N L G + ++
Sbjct: 192 NRIELSGTQVEIK 204
>AT1G74230.1 | Symbols: GR-RBP5 | glycine-rich RNA-binding protein 5
| chr1:27915346-27916857 FORWARD LENGTH=289
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
+ +++G + + ++ GL + F ++GE+V AK+I DR TG S+G+ FV + A+NA +
Sbjct: 34 SKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNA-M 92
Query: 391 AMNGYRLEGRTIAV 404
++G L GR I V
Sbjct: 93 QLDGQDLHGRRIRV 106
>AT4G36690.1 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor,
large subunit, splicing factor | chr4:17294139-17297609
REVERSE LENGTH=573
Length = 573
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+++G LP + + +L + FG + ++KDR TG SKGY F Y D+++ + A A+
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 420
Query: 393 NGYRLEGRTIAVR 405
NG ++ +T+ VR
Sbjct: 421 NGIKMGDKTLTVR 433
>AT4G36690.4 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor,
large subunit, splicing factor | chr4:17294139-17297609
REVERSE LENGTH=551
Length = 551
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+++G LP + + +L + FG + ++KDR TG SKGY F Y D+++ + A A+
Sbjct: 339 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 398
Query: 393 NGYRLEGRTIAVR 405
NG ++ +T+ VR
Sbjct: 399 NGIKMGDKTLTVR 411
>AT5G04280.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein with retrovirus zinc finger-like domain |
chr5:1192461-1195413 FORWARD LENGTH=310
Length = 310
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
+ +++G L P + D L + F +FG+I+ +++ +R TG S+G+GF+ +AD + +I
Sbjct: 7 SRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIR 66
Query: 391 AMNGYRLEGRTIAV 404
M+G R I+V
Sbjct: 67 EMHGRDFGDRVISV 80
>AT4G36690.3 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor,
large subunit, splicing factor | chr4:17294422-17297609
REVERSE LENGTH=565
Length = 565
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+++G LP + + +L + FG + ++KDR TG SKGY F Y D+++ + A A+
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 420
Query: 393 NGYRLEGRTIAVR 405
NG ++ +T+ VR
Sbjct: 421 NGIKMGDKTLTVR 433
>AT1G49760.2 | Symbols: PAB8 | poly(A) binding protein 8 |
chr1:18416740-18419753 FORWARD LENGTH=671
Length = 671
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
T+LY+G L T+ D L + F Q G++V +V +D T S GYG+V YA A+ A+
Sbjct: 45 TSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALN 104
Query: 391 AMNGYRLEGRTIAV 404
+N L GR I V
Sbjct: 105 ELNFMALNGRAIRV 118
>AT1G49760.1 | Symbols: PAB8, PABP8 | poly(A) binding protein 8 |
chr1:18416740-18419753 FORWARD LENGTH=671
Length = 671
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
T+LY+G L T+ D L + F Q G++V +V +D T S GYG+V YA A+ A+
Sbjct: 45 TSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALN 104
Query: 391 AMNGYRLEGRTIAV 404
+N L GR I V
Sbjct: 105 ELNFMALNGRAIRV 118
>AT3G04500.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:1212065-1213795 REVERSE LENGTH=245
Length = 245
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%)
Query: 329 DDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
+D L+ G L + DD L + F +F MAKVI+D+ TG +KGYGFV + + A
Sbjct: 135 NDYRLFCGDLGNEVNDDVLSKAFARFPTFNMAKVIRDKRTGKTKGYGFVSFLNPADLAAA 194
Query: 389 ILAMNGYRLEGRTIAVR 405
+ MNG + R I +R
Sbjct: 195 LKEMNGKYVGNRPIKLR 211
>AT4G36690.2 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor,
large subunit, splicing factor | chr4:17294591-17297609
REVERSE LENGTH=542
Length = 542
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+++G LP + + +L + FG + ++KDR TG SKGY F Y D+++ + A A+
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 420
Query: 393 NGYRLEGRTIAVR 405
NG ++ +T+ VR
Sbjct: 421 NGIKMGDKTLTVR 433
>AT3G52380.1 | Symbols: CP33, PDE322 | chloroplast RNA-binding
protein 33 | chr3:19421619-19422855 FORWARD LENGTH=329
Length = 329
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
LY+G LP T+ L Q+F + G +V +++ D++T S+G+GFV I A A+
Sbjct: 118 LYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMF 177
Query: 393 NGYRLEGRTIAV 404
N ++ GRT+ V
Sbjct: 178 NSSQIGGRTVKV 189
>AT2G46780.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:19229516-19231043 FORWARD LENGTH=336
Length = 336
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
T +++G L + D + + F+QFGEIV A VI D+ TG SKGYGFV + + A A
Sbjct: 22 TKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRACQ 81
Query: 391 AMN 393
MN
Sbjct: 82 NMN 84
>AT5G11412.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:3640349-3640876 REVERSE LENGTH=175
Length = 175
Score = 55.8 bits (133), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
T +Y+G LP ++GL F+QFG+I+ ++ DR TG S+GYGFV + D A A
Sbjct: 52 TKIYVGGLPWETRNEGLRSYFEQFGDIIHVNMVCDRETGRSEGYGFVTFRDAESATRA 109
>AT2G16940.1 | Symbols: | Splicing factor, CC1-like |
chr2:7342869-7347052 REVERSE LENGTH=561
Length = 561
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
LY+G L + +D L ++F+ FG + + +V +D TGL KG+GFV++A + A NA L +
Sbjct: 287 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRDE-TGLCKGFGFVQFARLEDARNA-LNL 344
Query: 393 NG-YRLEGRTIAV 404
NG + GR I V
Sbjct: 345 NGQLEIAGRAIKV 357
>AT2G16940.3 | Symbols: | Splicing factor, CC1-like |
chr2:7342869-7347052 REVERSE LENGTH=599
Length = 599
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
LY+G L + +D L ++F+ FG + + +V +D TGL KG+GFV++A + A NA L +
Sbjct: 325 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRDE-TGLCKGFGFVQFARLEDARNA-LNL 382
Query: 393 NG-YRLEGRTIAV 404
NG + GR I V
Sbjct: 383 NGQLEIAGRAIKV 395
>AT2G18510.1 | Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs)
family protein | chr2:8031554-8033517 REVERSE LENGTH=363
Length = 363
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAI 389
D +Y+G L L ++ L +LF Q G +V V KDR+T L + YGF++Y A+ AI
Sbjct: 24 DATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAI 83
Query: 390 LAMNGYRLEGRTIAV 404
+N +L G+ I V
Sbjct: 84 KVLNMIKLHGKPIRV 98
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 325 KKEID-DTNLYIGYLPPTLEDDGLIQLFQQFGEIVMA-KVIKDRMTGLSKGYGFVKYADI 382
KK +D NL+IG L P +++ L F FG I K+++D TG S+G+GF+ Y
Sbjct: 105 KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSF 164
Query: 383 TMANNAILAMNGYRLEGRTIAV 404
++ AI +M G L R I V
Sbjct: 165 EASDAAIESMTGQYLSNRQITV 186
>AT1G01080.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:45503-46789 REVERSE LENGTH=293
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+Y+G LP + DGL F +FG IV +V+ DR TG ++ + F+ + +A L+
Sbjct: 214 VYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTS-GEERDAALSF 272
Query: 393 NGYRLEGRTIAVR 405
NG + EGR I VR
Sbjct: 273 NGTQYEGRRIIVR 285
>AT2G16940.2 | Symbols: | Splicing factor, CC1-like |
chr2:7342869-7347052 REVERSE LENGTH=610
Length = 610
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
LY+G L + +D L ++F+ FG + + +V +D TGL KG+GFV++A + A NA L +
Sbjct: 336 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRDE-TGLCKGFGFVQFARLEDARNA-LNL 393
Query: 393 NG-YRLEGRTIAV 404
NG + GR I V
Sbjct: 394 NGQLEIAGRAIKV 406
>AT5G47620.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:19302548-19304278 REVERSE LENGTH=431
Length = 431
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 327 EIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMAN 386
E++ L+IG + +D L F FGE++ A ++KDR TG ++G+GFV +AD +A
Sbjct: 2 EMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAE 61
Query: 387 NAIL 390
+L
Sbjct: 62 RVVL 65
>AT5G47620.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:19302548-19304278 REVERSE LENGTH=431
Length = 431
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 327 EIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMAN 386
E++ L+IG + +D L F FGE++ A ++KDR TG ++G+GFV +AD +A
Sbjct: 2 EMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAE 61
Query: 387 NAIL 390
+L
Sbjct: 62 RVVL 65
>AT5G47620.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:19302548-19304278 REVERSE LENGTH=453
Length = 453
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 327 EIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMAN 386
E++ L+IG + +D L F FGE++ A ++KDR TG ++G+GFV +AD +A
Sbjct: 2 EMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAE 61
Query: 387 NAIL 390
+L
Sbjct: 62 RVVL 65
>AT1G01080.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:45503-46789 REVERSE LENGTH=294
Length = 294
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+Y+G LP + DGL F +FG IV +V+ DR TG ++ + F+ + +A L+
Sbjct: 215 VYVGNLPWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTS-GEERDAALSF 273
Query: 393 NGYRLEGRTIAVR 405
NG + EGR I VR
Sbjct: 274 NGTQYEGRRIIVR 286
>AT1G47490.2 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C |
chr1:17424801-17426114 FORWARD LENGTH=310
Length = 310
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLF-QQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
D ++++G L P + D+ L + F +++ + AKV+ D TG SKGYGFV++ D A
Sbjct: 196 DLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKA 255
Query: 389 ILAMNGYRLEGRTIAV 404
+ MNG + R + +
Sbjct: 256 MTEMNGVKCSSRAMRI 271
>AT3G14100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:4673027-4675950 FORWARD LENGTH=427
Length = 427
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 332 NLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILA 391
N+++G L P + D L Q F F A+V+ D+ TG S+G+GFV + + A AI
Sbjct: 145 NIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINE 204
Query: 392 MNGYRLEGRTI 402
MNG L R I
Sbjct: 205 MNGKWLSSRQI 215
>AT4G27000.1 | Symbols: ATRBP45C | RNA-binding (RRM/RBD/RNP motifs)
family protein | chr4:13554983-13557763 REVERSE
LENGTH=415
Length = 415
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQ-FGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILA 391
+++G L P + D L + F+ + + AKV+ DR TG SKGYGFV++AD + A+
Sbjct: 175 VFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTE 234
Query: 392 MNGYRLEGR 400
MNG R
Sbjct: 235 MNGQYCSSR 243
>AT5G54900.1 | Symbols: ATRBP45A, RBP45A | RNA-binding protein 45A |
chr5:22295412-22298126 FORWARD LENGTH=387
Length = 387
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQQ-FGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
D +++G L P + D L F+ +G + AKV+ DR TG SKGYGFV++AD A
Sbjct: 153 DHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRA 212
Query: 389 ILAMNGYRLEGRTIAV 404
+ MNG R + +
Sbjct: 213 MTEMNGQYCSTRPMRI 228
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%)
Query: 329 DDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
D +L+IG L ++++ ++ +F Q GE AKVI++++TG S+GYGF+++ ++A
Sbjct: 58 DVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERV 117
Query: 389 ILAMNG 394
+ NG
Sbjct: 118 LQTYNG 123
>AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C |
chr1:17424801-17427182 FORWARD LENGTH=432
Length = 432
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLF-QQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
D ++++G L P + D+ L + F +++ + AKV+ D TG SKGYGFV++ D A
Sbjct: 196 DLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKA 255
Query: 389 ILAMNGYRLEGRTIAV 404
+ MNG + R + +
Sbjct: 256 MTEMNGVKCSSRAMRI 271
>AT2G23350.1 | Symbols: PAB4, PABP4 | poly(A) binding protein 4 |
chr2:9943209-9946041 FORWARD LENGTH=662
Length = 662
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 327 EIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMAN 386
+ D NLY+ L T+ D+ L +LF +FG I KV++D +G SKG GFV ++ + A+
Sbjct: 324 KFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDP-SGTSKGSGFVAFSAASEAS 382
Query: 387 NAILAMNGYRLEGRTIAV 404
+ MNG + G+ + V
Sbjct: 383 RVLNEMNGKMVGGKPLYV 400
>AT3G07810.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:2492875-2495102 FORWARD LENGTH=495
Length = 495
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 329 DDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
D+ L+IG + ++ L + F FGE++ A ++KDR TG ++G+GFV +AD +A
Sbjct: 4 DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA--E 61
Query: 389 ILAMNGYRLEGRTIAVR 405
I+ + ++GR + +
Sbjct: 62 IVITEKHNIDGRLVEAK 78
>AT3G07810.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:2492875-2495052 FORWARD LENGTH=494
Length = 494
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 329 DDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
D+ L+IG + ++ L + F FGE++ A ++KDR TG ++G+GFV +AD +A
Sbjct: 4 DNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA--E 61
Query: 389 ILAMNGYRLEGRTIAVR 405
I+ + ++GR + +
Sbjct: 62 IVITEKHNIDGRLVEAK 78
>AT1G60900.1 | Symbols: | U2 snRNP auxilliary factor, large
subunit, splicing factor | chr1:22424008-22427806
FORWARD LENGTH=589
Length = 589
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+++G LP + + +L + FG + ++KDR TG SKGY F Y D ++ + A A+
Sbjct: 377 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIACAAL 436
Query: 393 NGYRLEGRTIAVR 405
NG ++ +T+ VR
Sbjct: 437 NGIKMGDKTLTVR 449
>AT4G00830.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352782-354965 FORWARD LENGTH=495
Length = 495
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
+ ++IG LP + ++ L L ++ GEI +++KDR +G SKGY FV + +A AI
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 175
Query: 391 AMNGYRLEGRTI 402
++ +G+TI
Sbjct: 176 ELHSKEFKGKTI 187
>AT4G00830.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352782-354965 FORWARD LENGTH=495
Length = 495
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
+ ++IG LP + ++ L L ++ GEI +++KDR +G SKGY FV + +A AI
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 175
Query: 391 AMNGYRLEGRTI 402
++ +G+TI
Sbjct: 176 ELHSKEFKGKTI 187
>AT1G22330.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:7886693-7889241 FORWARD LENGTH=291
Length = 291
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 327 EIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMAN 386
+ T +++G L D + + F QFGEI+ A +I D+ TG SKGYGFV + D A
Sbjct: 13 DTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGFVTFRDSDSAT 72
Query: 387 NAILAMN 393
A+ N
Sbjct: 73 RAVADPN 79
>AT4G00830.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:352842-354965 FORWARD LENGTH=467
Length = 467
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
+ ++IG LP + ++ L L ++ GEI +++KDR +G SKGY FV + +A AI
Sbjct: 96 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIE 155
Query: 391 AMNGYRLEGRTI 402
++ +G+TI
Sbjct: 156 ELHSKEFKGKTI 167
>AT4G26650.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:13445552-13447592 FORWARD LENGTH=455
Length = 455
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
L+IG + +++ L + F ++G++V A +++DR TG ++G+GF+ +AD ++A I M
Sbjct: 17 LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI--M 74
Query: 393 NGYRLEGRTIAVR 405
+ + ++GRT+ +
Sbjct: 75 DKHIIDGRTVEAK 87
>AT2G37510.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr2:15743112-15744504 REVERSE LENGTH=142
Length = 142
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
L++ L ++ L F FG++V A+VI DR +G SKG+GFV YA I A A M
Sbjct: 36 LFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAEM 95
Query: 393 NGYRLEGRTIAV 404
N L+G I V
Sbjct: 96 NAKFLDGWVIFV 107
>AT4G26650.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr4:13445265-13447592 FORWARD LENGTH=452
Length = 452
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
L+IG + +++ L + F ++G++V A +++DR TG ++G+GF+ +AD ++A I M
Sbjct: 14 LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI--M 71
Query: 393 NGYRLEGRTIAVR 405
+ + ++GRT+ +
Sbjct: 72 DKHIIDGRTVEAK 84
>AT5G19350.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:6518978-6521295 FORWARD LENGTH=425
Length = 425
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 332 NLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILA 391
L+IG L ++++ L F Q GE+V KVI++++TG +GYGF+++ A +
Sbjct: 25 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 84
Query: 392 MNGYRLEGRTIAVR 405
NG ++ G + R
Sbjct: 85 YNGTQMPGTELTFR 98
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQ-QFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
D ++++G L P + D L + F+ + + AKV+ D TG SKGYGFVK+A+ + N A
Sbjct: 115 DHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRA 174
Query: 389 ILAMNGYRLEGR 400
+ MNG R
Sbjct: 175 MAEMNGLYCSTR 186
>AT5G19350.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:6518978-6521295 FORWARD LENGTH=421
Length = 421
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 332 NLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILA 391
L+IG L ++++ L F Q GE+V KVI++++TG +GYGF+++ A +
Sbjct: 25 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 84
Query: 392 MNGYRLEGRTIAVR 405
NG ++ G + R
Sbjct: 85 YNGTQMPGTELTFR 98
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQ-QFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
D ++++G L P + D L + F+ + + AKV+ D TG SKGYGFVK+A+ + N A
Sbjct: 115 DHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRA 174
Query: 389 ILAMNGYRLEGR 400
+ MNG R
Sbjct: 175 MAEMNGLYCSTR 186
>AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein 1A |
chr1:20183923-20186824 REVERSE LENGTH=426
Length = 426
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 332 NLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILA 391
N+++G L P + D L F F A+V+ D+ TG S+G+GFV + + A AI
Sbjct: 149 NIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINE 208
Query: 392 MNGYRLEGRTI 402
MNG + R I
Sbjct: 209 MNGKWVSSRQI 219
>AT1G47500.1 | Symbols: ATRBP47C', RBP47C' | RNA-binding protein
47C' | chr1:17432682-17434805 FORWARD LENGTH=434
Length = 434
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLF-QQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
D ++++G L P + D L + F +++ + AKV+ D TG SKGYGFV++ D A
Sbjct: 198 DLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKA 257
Query: 389 ILAMNGYRLEGRTIAV 404
+ MNG + R + +
Sbjct: 258 MTEMNGVKCSSRAMRI 273
>AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G1 | chr3:3578536-3580366 FORWARD
LENGTH=294
Length = 294
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 22/160 (13%)
Query: 239 VVCKHC-GDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESATKQTSTLAI--GSG 295
+VC+ C G H + CP Y++ A + + T ++ST++ G+G
Sbjct: 137 MVCRICHKKGDHWTSKCP------------YKDLAAPTDVFIDKPPTGESSTMSAAPGTG 184
Query: 296 NSGSNPPWXXXXXXXXXXXXXXXXXXXXVKKEIDDTNLYIGYLPPTLEDDGLIQLFQQFG 355
+ PP +++ D+ ++ + L + L++LF FG
Sbjct: 185 KAAYVPP-------SMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFG 237
Query: 356 EIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAMNGY 395
+ V D+ TG+S+G+GFV + A AI +NGY
Sbjct: 238 AVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGY 277
>AT5G09880.1 | Symbols: | Splicing factor, CC1-like |
chr5:3081646-3085179 REVERSE LENGTH=527
Length = 527
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAI 389
D LY+G L + + L Q+F+ FG + + ++ D TG KG+GF+++ + + A
Sbjct: 264 DRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQ 323
Query: 390 LAMNG-YRLEGRTIAV 404
+A+NG + GRTI V
Sbjct: 324 IALNGKLEIAGRTIKV 339
>AT4G39260.4 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold,
circadian rhythm, and RNA binding 1 |
chr4:18274166-18274958 REVERSE LENGTH=105
Length = 105
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 334 YIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAMN 393
++G L D+ L + F QFG+++ +K+I DR +G S+G+GFV + D +AI MN
Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68
>AT5G55550.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502135-22503658 REVERSE LENGTH=460
Length = 460
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 327 EIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMAN 386
E D L+IG + +++ L F +G++V A +++DR TG ++G+GF+ +AD ++
Sbjct: 2 ESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSE 61
Query: 387 NAILAMNGYRLEGRTIAVR 405
I M+ + ++GRT+ +
Sbjct: 62 RVI--MDKHIIDGRTVEAK 78
>AT5G55550.3 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502135-22503658 REVERSE LENGTH=460
Length = 460
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 327 EIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMAN 386
E D L+IG + +++ L F +G++V A +++DR TG ++G+GF+ +AD ++
Sbjct: 2 ESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSE 61
Query: 387 NAILAMNGYRLEGRTIAVR 405
I M+ + ++GRT+ +
Sbjct: 62 RVI--MDKHIIDGRTVEAK 78
>AT5G55550.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502077-22503658 REVERSE LENGTH=448
Length = 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 327 EIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMAN 386
E D L+IG + +++ L F +G++V A +++DR TG ++G+GF+ +AD ++
Sbjct: 2 ESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSE 61
Query: 387 NAILAMNGYRLEGRTIAVR 405
I M+ + ++GRT+ +
Sbjct: 62 RVI--MDKHIIDGRTVEAK 78
>AT5G55550.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:22502077-22503658 REVERSE LENGTH=448
Length = 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 327 EIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMAN 386
E D L+IG + +++ L F +G++V A +++DR TG ++G+GF+ +AD ++
Sbjct: 2 ESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSE 61
Query: 387 NAILAMNGYRLEGRTIAVR 405
I M+ + ++GRT+ +
Sbjct: 62 RVI--MDKHIIDGRTVEAK 78
>AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding
protein 2 | chr4:16336732-16339892 FORWARD LENGTH=629
Length = 629
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 332 NLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILA 391
N++I L +++ L F FG IV KV D +G SKGYGFV+YA+ A AI
Sbjct: 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEK 183
Query: 392 MNGYRLEGRTIAV 404
+NG L + + V
Sbjct: 184 LNGMLLNDKQVYV 196
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAIL 390
TN+Y+ L + DD L F ++G+I A V+KD G SKG+GFV + + A A+
Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-EGKSKGFGFVNFENADDAARAVE 273
Query: 391 AMNGYRLEGR 400
++NG++ + +
Sbjct: 274 SLNGHKFDDK 283
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 327 EIDDTNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMAN 386
+ +NLY+ L P++ D+ L ++F FG + +KV++D G SKG GFV +A A
Sbjct: 314 KFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEAT 372
Query: 387 NAILAMNGYRLEGRTIAV 404
A+ ++G +E + + V
Sbjct: 373 EAMSQLSGKMIESKPLYV 390
>AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G1 | chr3:3578536-3580366 FORWARD
LENGTH=321
Length = 321
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 22/160 (13%)
Query: 239 VVCKHCGD-GGHPSIDCPVKGATGKKMDDEYQNFLAELGGTVPESATKQTSTLAI--GSG 295
+VC+ C G H + CP Y++ A + + T ++ST++ G+G
Sbjct: 164 MVCRICHKKGDHWTSKCP------------YKDLAAPTDVFIDKPPTGESSTMSAAPGTG 211
Query: 296 NSGSNPPWXXXXXXXXXXXXXXXXXXXXVKKEIDDTNLYIGYLPPTLEDDGLIQLFQQFG 355
+ PP +++ D+ ++ + L + L++LF FG
Sbjct: 212 KAAYVPP-------SMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFG 264
Query: 356 EIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAMNGY 395
+ V D+ TG+S+G+GFV + A AI +NGY
Sbjct: 265 AVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGY 304
>AT1G49600.1 | Symbols: ATRBP47A, RBP47A | RNA-binding protein 47A |
chr1:18357236-18360150 REVERSE LENGTH=445
Length = 445
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 330 DTNLYIGYLPPTLEDDGLIQLFQ-QFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
D ++++G L P + D L++ F ++ + AKV+ D TG SKGYGFV++ D + A
Sbjct: 212 DLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA 271
Query: 389 ILAMNGYRLEGRTIAV 404
+ MNG R + V
Sbjct: 272 MTEMNGAFCSSRQMRV 287
>AT1G78260.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:29447317-29450181 FORWARD LENGTH=287
Length = 287
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAI 389
T +++G L D + + F+QFGEI+ A +I D+ TG SKGYGFV + + A A+
Sbjct: 17 TKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAV 75
>AT1G76460.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:28686932-28688506 REVERSE LENGTH=285
Length = 285
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 331 TNLYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNA 388
T +++G L + + L Q F+Q+GEI+ A VI D+ TG SKGYGFV + D A A
Sbjct: 24 TKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRA 81
>AT3G52150.2 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:19342074-19343090 FORWARD LENGTH=253
Length = 253
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+YIG +P T+ ++ L +L ++ G + +V+ D+ +G S+ +GF + AN + +
Sbjct: 78 VYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKL 137
Query: 393 NGYRLEGRTIAV 404
NG +EGR I V
Sbjct: 138 NGNTVEGREIKV 149
>AT3G52150.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:19342074-19343090 FORWARD LENGTH=253
Length = 253
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 333 LYIGYLPPTLEDDGLIQLFQQFGEIVMAKVIKDRMTGLSKGYGFVKYADITMANNAILAM 392
+YIG +P T+ ++ L +L ++ G + +V+ D+ +G S+ +GF + AN + +
Sbjct: 78 VYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKL 137
Query: 393 NGYRLEGRTIAV 404
NG +EGR I V
Sbjct: 138 NGNTVEGREIKV 149