Miyakogusa Predicted Gene

Lj3g3v3724440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3724440.1 Non Chatacterized Hit- tr|I1L5P0|I1L5P0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,70.96,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; Smc hinge
domain,SMCs flexible hinge; coi,CUFF.46225.1
         (1060 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G07660.1 | Symbols: SMC6A | structural maintenance of chromos...  1123   0.0  
AT5G61460.1 | Symbols: MIM, ATRAD18, SMC6B | P-loop containing n...  1111   0.0  
AT5G15920.1 | Symbols: SMC5 | structural maintenance of chromoso...    67   5e-11
AT5G62410.1 | Symbols: SMC2, TTN3, ATCAP-E1, ATSMC4 | structural...    51   6e-06

>AT5G07660.1 | Symbols: SMC6A | structural maintenance of chromosomes
            6A | chr5:2422839-2429912 FORWARD LENGTH=1058
          Length = 1058

 Score = 1123 bits (2905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1040 (55%), Positives = 762/1040 (73%), Gaps = 1/1040 (0%)

Query: 22   TAGIIKRLRLENFMCHSNHETEFGKHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRAA 81
            ++G I R+RLENFMCHSN E EFG  VNFITGQNGSGKSAILTALCVAFGCRA+GTQRAA
Sbjct: 19   SSGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAA 78

Query: 82   TLKDFIKTGASNAVIHVEIQNEGEDAFKPEVYGDVIIVERRISEXXXXXXLKDRQGKKVC 141
            TLKDFIKTG S A+++VE++N+GEDAFKPE+YGD +I+ERRIS+      LKD QG+K+ 
Sbjct: 79   TLKDFIKTGCSYALVYVELKNQGEDAFKPEIYGDTLIIERRISDSTSLTVLKDHQGRKIS 138

Query: 142  SRKTDLQEIVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKATLLQQVNDLLEG 201
            SRK +L+E+VEH+NIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKATLLQQV+D+L+ 
Sbjct: 139  SRKEELRELVEHYNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKATLLQQVDDILQS 198

Query: 202  ISREITTAHAIVQDLETAIRPIEKELNELQVKIKAMEQVEKISLRAQQLKKKLAWSWVYD 261
            I  ++ +A+A++ ++E  I+PIEKE+NEL  KIK ME VE+I+ +   LKKKLAWSWVYD
Sbjct: 199  IGTKLNSANALLDEMEKTIKPIEKEINELLEKIKNMEHVEEITQQVLHLKKKLAWSWVYD 258

Query: 262  VDKQLEQQNVKIEKLKNRIPTCQAKIDQQLHRIEELKERCSMKKAEIASMLDTTSQVKQM 321
            VD+QL++QN KI K K R+PTCQ KID++L  +E L+   + KKA++A ++D ++ +K+ 
Sbjct: 259  VDRQLKEQNEKIVKFKERVPTCQNKIDRKLGEVESLRVSLTEKKAQVACLIDESTAMKRE 318

Query: 322  KESLRQSMSLARKEKLECERDYNSKRSSIQKLEDQLKKFEGQMHDIQEQHVKNTQAEVSN 381
             E LRQSM  A +EK+  E +Y+ K S+IQK++D++++ E Q+ DI E  +++TQ E S 
Sbjct: 319  LECLRQSMKKAAREKIALEEEYHHKCSNIQKIKDRVRRLERQIEDINEMTIRSTQVEQSE 378

Query: 382  MEEKVNKLRDEFHVADSNLRRLKEEEALLMNEIQMQNEEIKKIVSKIQDHGKKERAKLDN 441
            +E K+N+L  E   A+S +  LKEEE ++M +     +E + I   I+DH KK+R    +
Sbjct: 379  IEGKLNQLTVEVEKAESLVSSLKEEENMVMEKASAGGKEKEHIEEMIRDHEKKQRNMNAH 438

Query: 442  IGVLQRQQNNTITVFGGDKVMHLLHIIEDNHRKFKMPPIGPIGAHLKLLHGKQWAVAIEY 501
            I  L++ Q N +T FGGDKV++LL  IE +HR+FKMPPIGPIGAH+ L++G +WA A+E 
Sbjct: 439  INDLKKHQTNKVTAFGGDKVINLLRAIERHHRRFKMPPIGPIGAHVTLINGNRWASAVEQ 498

Query: 502  AIGRLFNSFIVTDYDDFRLLKKYAMQARYGDLRIIIYDFSTPRLTIPQHMLPNTKYPTAL 561
            A+G L N+FIVTD+ D   L+    +A+Y +L+IIIYDFS PRL IP+HM+P T++PT L
Sbjct: 499  ALGNLLNAFIVTDHKDLVALRDCGKEAKYNNLKIIIYDFSRPRLDIPRHMIPQTEHPTIL 558

Query: 562  SVLQCENHTVNNVLVDLGSVERQVLVNDYETGKEVAFEQRIQNLKEVYTASGSRMFSRGP 621
            SVL  EN TV NVLVD+  VER VL  +YE GK +AFE+R+ +LK+V+T  G RMFSRGP
Sbjct: 559  SVLHSENTTVLNVLVDVSCVERHVLAENYEVGKIIAFERRLSHLKDVFTIDGYRMFSRGP 618

Query: 622  VQTVLPGGRKRGRLSI-SFEDEIAKLRXXXXXXXXXXXXCRRNKRVAEEKLEELHSRMNS 680
            VQT LP   +R      SF+D+I  L             CR  KR AE  LE L S M  
Sbjct: 619  VQTTLPPRPRRPTRLCASFDDQIKDLEIEASREQSEIQECRGQKREAEMNLEGLESTMRR 678

Query: 681  IKKRCAHAGQDFTSKKXXXXXXXXXXXXXRGLTSSSSVDEIGEAISEIQKKKDEEQVLLK 740
            +KK+     +D T K+                + +SSV+E+   I + QK+ +E++ LL+
Sbjct: 679  LKKQRTQLEKDLTRKELEMQDLKNSVASETKASPTSSVNELHLEIMKFQKEIEEKESLLE 738

Query: 741  NLQQKKHEAAGKADDLKTQFDKLCESTNGEIAALEKAETELVEIERDMDAAQEEKYHYDG 800
             LQ    EA  KA++LK  ++ L ES  GEI ALEKAE EL E E ++ +A+ EK HY+ 
Sbjct: 739  KLQDSLKEAELKANELKASYENLYESAKGEIEALEKAEDELKEKEDELHSAETEKNHYED 798

Query: 801  VMKNKVLRDIQEAEEHNLVLTKRREEFVEKASIICCVNELNSLGGCDGDTPEKISAQLEE 860
            +MK+KVL +I++AE     L  +R+E  +KASIIC  +E+ +LG  DG TP ++SAQ+ +
Sbjct: 799  IMKDKVLPEIKQAETIYKELEMKRQESNKKASIICPESEIKALGPWDGPTPLQLSAQINK 858

Query: 861  VKQTLRRESPRYSESIDDLRMLYAKKERKITKRQQVYKALRQKLDACERALKVRRNKFQT 920
            +   L+RE+  YSESIDDLR+++ +KE+KI K+++ YK+ R+KL  C+ A+  R NK Q 
Sbjct: 859  INHRLKRENENYSESIDDLRIMHGEKEQKIGKKRKTYKSCREKLKVCKDAVDSRWNKLQR 918

Query: 921  NASCVKRQLSWKFNTHLRRKGISGLIRVNYEKETLLIEVQMPQDASNKAVQDTRGLSGGE 980
            N   +KR+L+W+FN HL +KGISG IRV+YE +TL IEV+MPQDA+N AV+DTRGLSGGE
Sbjct: 919  NKDLLKRELTWQFNHHLGKKGISGNIRVSYEDKTLSIEVKMPQDATNSAVRDTRGLSGGE 978

Query: 981  RSFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAVEQGSQWICITPHD 1040
            RSFSTLCF LAL  MTE+P RAMDEFDVFMDAVSRKISLDTL+DFA++QGSQW+ ITPHD
Sbjct: 979  RSFSTLCFTLALQNMTEAPIRAMDEFDVFMDAVSRKISLDTLIDFALKQGSQWMFITPHD 1038

Query: 1041 TSSVKAGDRVKKMQMAAPRS 1060
             S VK+ +++KK QMAAPRS
Sbjct: 1039 ISMVKSHEKIKKQQMAAPRS 1058


>AT5G61460.1 | Symbols: MIM, ATRAD18, SMC6B | P-loop containing
            nucleoside triphosphate hydrolases superfamily protein |
            chr5:24714551-24721841 REVERSE LENGTH=1057
          Length = 1057

 Score = 1111 bits (2873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/1039 (55%), Positives = 757/1039 (72%), Gaps = 1/1039 (0%)

Query: 23   AGIIKRLRLENFMCHSNHETEFGKHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRAAT 82
            +G I R+++ENFMCHSN + EFG+ VNFITGQNGSGKSAILTALCVAFGCRA+GTQRAAT
Sbjct: 19   SGSILRIKVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAAT 78

Query: 83   LKDFIKTGASNAVIHVEIQNEGEDAFKPEVYGDVIIVERRISEXXXXXXLKDRQGKKVCS 142
            LKDFIKTG S AV+ VE++N GEDAFKPE+YG VII+ERRI+E      LKD  GKKV +
Sbjct: 79   LKDFIKTGCSYAVVQVEMKNSGEDAFKPEIYGGVIIIERRITESATATVLKDYLGKKVSN 138

Query: 143  RKTDLQEIVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKATLLQQVNDLLEGI 202
            ++ +L+E+VEHFNIDVENPCV+MSQDKSREFLHSGNDKDKFKFF+KATLLQQVNDLL+ I
Sbjct: 139  KRDELRELVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFFKATLLQQVNDLLQSI 198

Query: 203  SREITTAHAIVQDLETAIRPIEKELNELQVKIKAMEQVEKISLRAQQLKKKLAWSWVYDV 262
               +T A AIV +LE  I+PIEKE++EL+ KIK MEQVE+I+ R QQLKKKLAWSWVYDV
Sbjct: 199  YEHLTKATAIVDELENTIKPIEKEISELRGKIKNMEQVEEIAQRLQQLKKKLAWSWVYDV 258

Query: 263  DKQLEQQNVKIEKLKNRIPTCQAKIDQQLHRIEELKERCSMKKAEIASMLDTTSQVKQMK 322
            D+QL++Q  KI KLK RIPTCQAKID +L ++E L++  + KKA++A ++D ++ +K+  
Sbjct: 259  DRQLQEQTEKIVKLKERIPTCQAKIDWELGKVESLRDTLTKKKAQVACLMDESTAMKREI 318

Query: 323  ESLRQSMSLARKEKLECERDYNSKRSSIQKLEDQLKKFEGQMHDIQEQHVKNTQAEVSNM 382
            ES  QS   A +EK+  + ++N K + +QK++D++++ E Q+ DI EQ +KNTQAE S +
Sbjct: 319  ESFHQSAKTAVREKIALQEEFNHKCNYVQKIKDRVRRLERQVGDINEQTMKNTQAEQSEI 378

Query: 383  EEKVNKLRDEFHVADSNLRRLKEEEALLMNEIQMQNEEIKKIVSKIQDHGKKERAKLDNI 442
            EEK+  L  E    ++   RLKEEE   + +     ++++ I   I++H K++R    NI
Sbjct: 379  EEKLKYLEQEVEKVETLRSRLKEEENCFLEKAFEGRKKMEHIEDMIKNHQKRQRFITSNI 438

Query: 443  GVLQRQQNNTITVFGGDKVMHLLHIIEDNHRKFKMPPIGPIGAHLKLLHGKQWAVAIEYA 502
              L++ Q N +T FGGD+V++LL  IE NHR+F+ PPIGPIG+H+ L++G +WA ++E A
Sbjct: 439  NDLKKHQTNKVTAFGGDRVINLLQAIERNHRRFRKPPIGPIGSHVTLVNGNKWASSVEQA 498

Query: 503  IGRLFNSFIVTDYDDFRLLKKYAMQARYGDLRIIIYDFSTPRLTIPQHMLPNTKYPTALS 562
            +G L N+FIVTD+ D   L+  A +A Y +L+IIIYDFS PRL IP+HM+P T++PT  S
Sbjct: 499  LGTLLNAFIVTDHKDSLTLRGCANEANYRNLKIIIYDFSRPRLNIPRHMVPQTEHPTIFS 558

Query: 563  VLQCENHTVNNVLVDLGSVERQVLVNDYETGKEVAFEQRIQNLKEVYTASGSRMFSRGPV 622
            V+  +N TV NVLVD   VERQVL  +YE GK VAF +R+ NLKEVYT  G +MF RGPV
Sbjct: 559  VIDSDNPTVLNVLVDQSGVERQVLAENYEEGKAVAFGKRLSNLKEVYTLDGYKMFFRGPV 618

Query: 623  QTVLPG-GRKRGRLSISFEDEIAKLRXXXXXXXXXXXXCRRNKRVAEEKLEELHSRMNSI 681
            QT LP   R+  RL  SF+D+I  L             C R KR AEE LEEL  ++  +
Sbjct: 619  QTTLPPLSRRPSRLCASFDDQIKDLEIEASKEQNEINQCMRRKREAEENLEELELKVRQL 678

Query: 682  KKRCAHAGQDFTSKKXXXXXXXXXXXXXRGLTSSSSVDEIGEAISEIQKKKDEEQVLLKN 741
            KK  + A +  T+K+                  SSSV+E+   I +  ++ DE++  L+ 
Sbjct: 679  KKHRSQAEKVLTTKELEMHDLKNTVAAEIEALPSSSVNELQREIMKDLEEIDEKEAFLEK 738

Query: 742  LQQKKHEAAGKADDLKTQFDKLCESTNGEIAALEKAETELVEIERDMDAAQEEKYHYDGV 801
            LQ    EA  KA+ L   F+ + ES  GEI A E+AE EL +IE+D+ +A+ EK HY+ +
Sbjct: 739  LQNCLKEAELKANKLTALFENMRESAKGEIDAFEEAENELKKIEKDLQSAEAEKIHYENI 798

Query: 802  MKNKVLRDIQEAEEHNLVLTKRREEFVEKASIICCVNELNSLGGCDGDTPEKISAQLEEV 861
            MKNKVL DI+ AE +   L  +R+E  +KAS IC  +E+ SLG  DG TPE++SAQ+  +
Sbjct: 799  MKNKVLPDIKNAEANYEELKNKRKESDQKASEICPESEIESLGPWDGSTPEQLSAQITRM 858

Query: 862  KQTLRRESPRYSESIDDLRMLYAKKERKITKRQQVYKALRQKLDACERALKVRRNKFQTN 921
             Q L RE+ ++SESIDDLRM+Y   ERKI K+++ Y+  R+KL AC+ AL  R  KFQ N
Sbjct: 859  NQRLHRENQQFSESIDDLRMMYESLERKIAKKRKSYQDHREKLMACKNALDSRWAKFQRN 918

Query: 922  ASCVKRQLSWKFNTHLRRKGISGLIRVNYEKETLLIEVQMPQDASNKAVQDTRGLSGGER 981
            AS ++RQL+W+FN HL +KGISG I+V+YE +TL IEV+MPQDA++  V+DT+GLSGGER
Sbjct: 919  ASLLRRQLTWQFNAHLGKKGISGHIKVSYENKTLSIEVKMPQDATSNVVRDTKGLSGGER 978

Query: 982  SFSTLCFALALHEMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAVEQGSQWICITPHDT 1041
            SFSTLCFALALHEMTE+PFRAMDEFDVFMDAVSRKISLD LVDFA+ +GSQW+ ITPHD 
Sbjct: 979  SFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDALVDFAIGEGSQWMFITPHDI 1038

Query: 1042 SSVKAGDRVKKMQMAAPRS 1060
            S VK+ +R+KK QMAAPRS
Sbjct: 1039 SMVKSHERIKKQQMAAPRS 1057


>AT5G15920.1 | Symbols: SMC5 | structural maintenance of chromosomes
           5 | chr5:5196210-5199559 FORWARD LENGTH=1053
          Length = 1053

 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 116/529 (21%), Positives = 224/529 (42%), Gaps = 79/529 (14%)

Query: 23  AGIIKRLRLENFMCHSNHETEFGKHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRAAT 82
            G I  + L NFM  ++   + G  +N + G NGSGKS+++ A+ +  G   +   RA +
Sbjct: 20  PGNIIEIELHNFMTFNHLVCKPGSRLNLVIGPNGSGKSSLVCAIALCLGGEPQLLGRATS 79

Query: 83  LKDFIKTGASNAVIHVEIQNEGEDAFKPEVYGDVIIVERRISEXXXXXXLKDRQGKKVCS 142
           +  ++K G  +  + + ++    +        + + + R+I        + +  G  V  
Sbjct: 80  VGAYVKRGEDSGYVKISLRGNTRE--------ENLTIFRKIDTRNKSEWMFN--GSTVS- 128

Query: 143 RKTDLQEIVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKATLLQQVNDLLEGI 202
            K D+ EI++ FNI V N    + QD+  EF              K T +Q + +  + +
Sbjct: 129 -KKDIVEIIQKFNIQVNNLTQFLPQDRVCEFA-------------KLTPVQLLEETEKAV 174

Query: 203 SREITTAH--AIVQ------DLETAIRPIEKELNELQVKIKAMEQ-VEKISLR------A 247
                  H  A+V+       LE A+    + LN+L+  +   E+ VE++  R       
Sbjct: 175 GDPQLPVHHRALVEKSRDLKQLERAVAKNGETLNQLKALVDEQEKDVERVRQRELFLTKV 234

Query: 248 QQLKKKLAWSWVYDVDKQLEQQNVKIEKLKNRIPTCQAKIDQQLHRIEELKERCSMKKAE 307
             +KKKL W   YD+ K       +    K R+   + K+D+    +  +KE    +K E
Sbjct: 235 DSMKKKLPW-LKYDMKK------AEYMDAKKRMKEAEKKLDEAAKNLNSMKEPIEKQKKE 287

Query: 308 IASMLDTTSQVKQMKESLRQSMSLARKEKLECERDYNSK------------RSSIQKLED 355
            A   +T S+ K++K +L  +    R   LE E + +++            +    + E 
Sbjct: 288 KA---ETDSKCKKVK-NLMDANGRNRCHLLEKEDEADARVVATYKELEELKKQEEHRQER 343

Query: 356 QLKKFEGQMHDIQE-QHVKNTQAEVSNMEEKVNKLRDEFHVADSNLRRLKEEEALLMNEI 414
            LK  E  +   +E Q++   +  V+ +EE  +++ +  H  +    + ++ E LL    
Sbjct: 344 ILKATEDLVAAERELQNLPVYERPVAKLEELSSQVTELHHSINGKKNQKEDNEKLL---- 399

Query: 415 QMQNEEIKKIVSKIQDHGKKERAKLDNIGVLQRQQNNTITVFGGDKVMHLLHIIEDNHRK 474
             +   +++ V K++D    E A   N  +L+   N+     G D++      ++ N  +
Sbjct: 400 SQKRYTLRQCVDKLKDM---ENA---NNKLLKALANS-----GADRIFDAYQWVQQNRHE 448

Query: 475 FKMPPIGPIGAHLKLLHGKQWAVAIEYAIGRLFNSFIVTDYDDFRLLKK 523
           FK    GP+   + + + +       +    ++ SFI  D +D  LL K
Sbjct: 449 FKREVYGPVLVEVNVPNRENACFLEGHVSFYIWKSFITQDPEDRDLLVK 497


>AT5G62410.1 | Symbols: SMC2, TTN3, ATCAP-E1, ATSMC4 | structural
           maintenance of chromosomes 2 | chr5:25056308-25062436
           FORWARD LENGTH=1175
          Length = 1175

 Score = 50.8 bits (120), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 13/158 (8%)

Query: 26  IKRLRLENFMCHSNHE--TEFGKHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRAATL 83
           IK + LE F  ++     + F  H N ITG NGSGKS IL ++C   G       RAA L
Sbjct: 3   IKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAANL 62

Query: 84  KDFI----KTGASNAVIHVEIQNEGEDAFKPEVYGD--VIIVERRISEXXXXXXLKDRQG 137
           ++ +    + G + A + V   N  E    P  Y +   I V R+I        L +  G
Sbjct: 63  QELVYKQGQAGITKATVSVTFDN-SERHRSPLGYEEHPEITVTRQIVVGGRNKYLIN--G 119

Query: 138 KKVCSRKTDLQEIVEHFNIDVENPCVIMSQDKSREFLH 175
           K   ++ + +Q +     ++V NP  ++ Q +  + L+
Sbjct: 120 K--LAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLN 155