Miyakogusa Predicted Gene
- Lj3g3v3724410.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3724410.1 CUFF.46222.1
(496 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07670.1 | Symbols: | RNI-like superfamily protein | chr5:24... 517 e-147
AT5G51380.1 | Symbols: | RNI-like superfamily protein | chr5:20... 486 e-137
AT5G51370.2 | Symbols: | RNI-like superfamily protein | chr5:20... 451 e-127
AT5G51370.1 | Symbols: | RNI-like superfamily protein | chr5:20... 356 2e-98
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 87 2e-17
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 75 2e-13
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 66 5e-11
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1... 65 1e-10
AT5G01720.1 | Symbols: | RNI-like superfamily protein | chr5:26... 62 9e-10
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch... 60 3e-09
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr... 60 3e-09
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr... 59 7e-09
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei... 57 2e-08
AT3G07550.2 | Symbols: | RNI-like superfamily protein | chr3:24... 55 8e-08
AT3G07550.1 | Symbols: | RNI-like superfamily protein | chr3:24... 55 8e-08
AT4G33210.1 | Symbols: SLOMO | F-box family protein | chr4:16015... 50 2e-06
AT3G58530.1 | Symbols: | RNI-like superfamily protein | chr3:21... 50 5e-06
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276... 49 7e-06
>AT5G07670.1 | Symbols: | RNI-like superfamily protein |
chr5:2430421-2432065 FORWARD LENGTH=476
Length = 476
Score = 517 bits (1332), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/460 (58%), Positives = 325/460 (70%), Gaps = 10/460 (2%)
Query: 26 KKRGPRWSDIWLKHTKSKPLSPMVVAMQLHSLPSHKDKSDNINNPLISNFSIXXXXXXXX 85
KKR WS++W+ H SP+ +A + SL KS L+ +F++
Sbjct: 16 KKRRASWSELWVNHHHLLSSSPLDLAAKFQSLTPPISKSKT----LLPDFTLLLPDLILI 71
Query: 86 XXXXXXXXAKLPDSQRNSNSLVCKRWLNLQGRLVRSIRILDWNFLLSGRLIHRFPNLNHV 145
K+P+SQR + SLVCKRW L GRLVRS ++ DW FL SGRLI RFPNL V
Sbjct: 72 RVI-----QKIPNSQRKNLSLVCKRWFRLHGRLVRSFKVSDWEFLSSGRLISRFPNLETV 126
Query: 146 DLVPGSLISPKSSCILIGNRVLSMHIDSGSSPNWCFCEENMLPVEVIDNGLSALASGCPN 205
DLV G LISP + IL+ +R++S + GS +W F EEN+L VE+++ GL ALA GC N
Sbjct: 127 DLVSGCLISPPNLGILVNHRIVSFTVGVGSYQSWSFFEENLLSVELVERGLKALAGGCSN 186
Query: 206 LRRVQVVGASEMGLLSVAEECPTLQELELQMCSDNVLRGIAACVNLQILKLVGNVDGFYS 265
LR++ V SE+GLL+VAEEC LQELEL CSD+VL GI A NLQIL+LVGNVDG Y+
Sbjct: 187 LRKLVVTNTSELGLLNVAEECSRLQELELHKCSDSVLLGIGAFENLQILRLVGNVDGLYN 246
Query: 266 SVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWLAA 325
S+VSDIGL ILAQGCKRLVKLEL GCEG FDGIK IG+CCQMLEELT CD++M+ GWL
Sbjct: 247 SLVSDIGLMILAQGCKRLVKLELVGCEGGFDGIKEIGECCQMLEELTVCDNKMESGWLGG 306
Query: 326 LSYCENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTA 385
L YCENLKTLK SCK+ID P E CPALERL L+KCQLRDK ++ A+F +C A
Sbjct: 307 LRYCENLKTLKLVSCKKIDNDPD-ESLSCCCPALERLQLEKCQLRDKNTVKALFKMCEAA 365
Query: 386 REIILQDCWGLDNSMFSLAVICRRVKLICLEGCSLLTTEGLESVIHLWKELQSLRVVSCK 445
REI+ QDCWGLDN +FSLA+ RVKL+ LEGCSLLTT GLESVI W EL+ L+VVSCK
Sbjct: 366 REIVFQDCWGLDNDIFSLAMAFGRVKLLYLEGCSLLTTSGLESVILHWHELEHLKVVSCK 425
Query: 446 HIKDSEISPALATSFTTLKELKWSPDTKSLLPSRLVGISI 485
+IKDSE+SP+L+ F+ L EL+W PDT+S L S L G I
Sbjct: 426 NIKDSEVSPSLSALFSALVELQWRPDTRSHLSSSLTGTGI 465
>AT5G51380.1 | Symbols: | RNI-like superfamily protein |
chr5:20875945-20877779 FORWARD LENGTH=479
Length = 479
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/460 (55%), Positives = 320/460 (69%), Gaps = 7/460 (1%)
Query: 26 KKRGPRWSDIWLKHTKSKPLSPMVVAMQLHSLPSHKDKSDNINNPLISNFSIXXXXXXXX 85
++R W+ WL H + + +Q S P + KS L S+FS
Sbjct: 16 RRRRSSWTGTWLNHQTTSFKQAVSAVIQAQS-PRSRFKS------LSSDFSDVDRTLSLS 68
Query: 86 XXXXXXXXAKLPDSQRNSNSLVCKRWLNLQGRLVRSIRILDWNFLLSGRLIHRFPNLNHV 145
KLP+SQ SLVCKRWL++QGR +RS+++ DW FLLSGRL+ RFP L V
Sbjct: 69 DSLLLKILEKLPESQNEDVSLVCKRWLSVQGRRLRSMKVFDWEFLLSGRLVSRFPKLTSV 128
Query: 146 DLVPGSLISPKSSCILIGNRVLSMHIDSGSSPNWCFCEENMLPVEVIDNGLSALASGCPN 205
DLV +S IL+ + +S H+ + SS N F EE++L E++D GL L G +
Sbjct: 129 DLVNACFNPSSNSGILLCHTSISFHVSTDSSLNLNFVEESLLDNEMVDKGLRVLGRGSFD 188
Query: 206 LRRVQVVGASEMGLLSVAEECPTLQELELQMCSDNVLRGIAACVNLQILKLVGNVDGFYS 265
L ++ V+ A+E+GLLS+AE+C LQELEL CSDN+LRGIAAC NL+ L+LVG+VDG YS
Sbjct: 189 LIKLVVINATELGLLSLAEDCSDLQELELHKCSDNLLRGIAACENLRGLRLVGSVDGLYS 248
Query: 266 SVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWLAA 325
S VSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIG+CC++LEEL+ CDHRMDDGW+AA
Sbjct: 249 SSVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGQCCEVLEELSICDHRMDDGWIAA 308
Query: 326 LSYCENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTA 385
LSY E+LKTL SC++ID PG + LGSCPALE L L++C L DK+ + A+F VC
Sbjct: 309 LSYFESLKTLLISSCRKIDSSPGPGKLLGSCPALESLQLRRCCLNDKEGMRALFKVCDGV 368
Query: 386 REIILQDCWGLDNSMFSLAVICRRVKLICLEGCSLLTTEGLESVIHLWKELQSLRVVSCK 445
++ +QDCWGLD+ FSLA RRV+ + LEGCS+LTT GLESVI W+EL+S+RVVSCK
Sbjct: 369 TKVNIQDCWGLDDDSFSLAKAFRRVRFLSLEGCSILTTSGLESVILHWEELESMRVVSCK 428
Query: 446 HIKDSEISPALATSFTTLKELKWSPDTKSLLPSRLVGISI 485
+IKDSEIS AL++ F+ LKEL W PDT+S L S L G I
Sbjct: 429 NIKDSEISAALSSLFSLLKELTWRPDTRSHLSSSLEGTGI 468
>AT5G51370.2 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20874192 FORWARD LENGTH=446
Length = 446
Score = 451 bits (1161), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/391 (61%), Positives = 299/391 (76%), Gaps = 1/391 (0%)
Query: 95 KLPDSQRNSNSLVCKRWLNLQGRLVRSIRILDWNFLLSGRLIHRFPNLNHVDLVPGSLIS 154
KLP+SQ N SLVCKRWLNLQG+ +RS+++LD++FLLS RL RFPNL HVDLV +
Sbjct: 43 KLPESQSNDVSLVCKRWLNLQGQRLRSLKLLDFDFLLSERLTTRFPNLTHVDLVNACMNP 102
Query: 155 PKSSCILIGNRVLSMHIDSGSSPNWCFCEENMLPVEVIDNGLSALASGCPNLRRVQVVGA 214
+S IL ++ +S H+ S SS NW F EEN+L +VID GL L+ +L ++V+ A
Sbjct: 103 RVNSGILFCHKSISFHLSSDSS-NWEFLEENLLHSDVIDRGLRILSRESFDLLNLKVINA 161
Query: 215 SEMGLLSVAEECPTLQELELQMCSDNVLRGIAACVNLQILKLVGNVDGFYSSVVSDIGLT 274
SE+GLLS+A +C LQELEL C+DN+L GIAAC NL+ L+LVG+VDG YSS VSDIGLT
Sbjct: 162 SELGLLSLAGDCSDLQELELHKCNDNLLHGIAACKNLKGLRLVGSVDGLYSSSVSDIGLT 221
Query: 275 ILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWLAALSYCENLKT 334
LAQGC+ LVKLELSGCEGSFDGIKAIG+CC++LEEL+ CDHRMDDGW+AALSY E+LK
Sbjct: 222 FLAQGCRSLVKLELSGCEGSFDGIKAIGQCCEVLEELSICDHRMDDGWIAALSYFESLKI 281
Query: 335 LKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTAREIILQDCW 394
L+ SC++ID PG E+ L SCPA+E L L++C L DK+ I A+F VC A E+ +QDCW
Sbjct: 282 LRISSCRKIDASPGPEKLLRSCPAMESLQLKRCCLNDKEGIKALFKVCDGATEVNIQDCW 341
Query: 395 GLDNSMFSLAVICRRVKLICLEGCSLLTTEGLESVIHLWKELQSLRVVSCKHIKDSEISP 454
GL + FSLA RRV+ + LEGCS+LT+ GLESVI W+EL+S+RVVSCK IKDSEISP
Sbjct: 342 GLSDDCFSLAKAFRRVRFLSLEGCSVLTSGGLESVILHWEELESMRVVSCKSIKDSEISP 401
Query: 455 ALATSFTTLKELKWSPDTKSLLPSRLVGISI 485
AL++ F+ LKEL W PDT+S L S L G I
Sbjct: 402 ALSSLFSLLKELTWRPDTRSHLSSSLEGAGI 432
>AT5G51370.1 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20873850 FORWARD LENGTH=355
Length = 355
Score = 356 bits (913), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/314 (60%), Positives = 238/314 (75%), Gaps = 1/314 (0%)
Query: 95 KLPDSQRNSNSLVCKRWLNLQGRLVRSIRILDWNFLLSGRLIHRFPNLNHVDLVPGSLIS 154
KLP+SQ N SLVCKRWLNLQG+ +RS+++LD++FLLS RL RFPNL HVDLV +
Sbjct: 43 KLPESQSNDVSLVCKRWLNLQGQRLRSLKLLDFDFLLSERLTTRFPNLTHVDLVNACMNP 102
Query: 155 PKSSCILIGNRVLSMHIDSGSSPNWCFCEENMLPVEVIDNGLSALASGCPNLRRVQVVGA 214
+S IL ++ +S H+ S SS NW F EEN+L +VID GL L+ +L ++V+ A
Sbjct: 103 RVNSGILFCHKSISFHLSSDSS-NWEFLEENLLHSDVIDRGLRILSRESFDLLNLKVINA 161
Query: 215 SEMGLLSVAEECPTLQELELQMCSDNVLRGIAACVNLQILKLVGNVDGFYSSVVSDIGLT 274
SE+GLLS+A +C LQELEL C+DN+L GIAAC NL+ L+LVG+VDG YSS VSDIGLT
Sbjct: 162 SELGLLSLAGDCSDLQELELHKCNDNLLHGIAACKNLKGLRLVGSVDGLYSSSVSDIGLT 221
Query: 275 ILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHRMDDGWLAALSYCENLKT 334
LAQGC+ LVKLELSGCEGSFDGIKAIG+CC++LEEL+ CDHRMDDGW+AALSY E+LK
Sbjct: 222 FLAQGCRSLVKLELSGCEGSFDGIKAIGQCCEVLEELSICDHRMDDGWIAALSYFESLKI 281
Query: 335 LKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTAREIILQDCW 394
L+ SC++ID PG E+ L SCPA+E L L++C L DK+ I A+F VC A E+ +QDCW
Sbjct: 282 LRISSCRKIDASPGPEKLLRSCPAMESLQLKRCCLNDKEGIKALFKVCDGATEVNIQDCW 341
Query: 395 GLDNSMFSLAVICR 408
GL + FSLA R
Sbjct: 342 GLSDDCFSLAKAFR 355
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 173/381 (45%), Gaps = 46/381 (12%)
Query: 100 QRNSNSLVCKRWLNLQGRLVRSIRIL------DWNFLLSGRLIHRFPNLNHVD------- 146
R++ SLVCKRWL+L+ ++RI D+ LLS R + + HVD
Sbjct: 28 NRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISLLSRRFL--YITSIHVDERISVSL 85
Query: 147 -----LVPGSLISPKSSCILIGNRVLSMHIDSGSSPNWCFCEENMLPVEVIDNGLSALAS 201
SS + L+ SG+ EN+ + D GL+ALA+
Sbjct: 86 PSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGA--------ENVESSSLTDTGLTALAN 137
Query: 202 GCPNLRRVQVV---GASEMGLLSVAEECPTLQELELQMC--SDNVLRGIAA-CVNLQILK 255
G P + + ++ S +GL S+A++C +L+ L+LQ C D L + C L+ L
Sbjct: 138 GFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELN 197
Query: 256 LVGNVDGFYSSVVSDIGLTILAQGC-KRLVKLELSGCEGSFD-GIKAIGKCCQMLEELTF 313
L + ++D+G+ L GC K L + ++ D ++A+G C++LE L
Sbjct: 198 L------RFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYL 251
Query: 314 -CDHRMDDGWLAALSYCENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDK 372
++ D G +A C LK LK Q D L C +LERL L Q
Sbjct: 252 DSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGEL--CTSLERLALYSFQHFTD 309
Query: 373 KSIAAMFSVCRTAREIILQDCWGLD-NSMFSLAVICRRVKLICLEGCSLLTTEGLESVIH 431
K + A+ + +++ L DC+ + + ++A C+ ++ + + GC + T G+E++
Sbjct: 310 KGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGK 369
Query: 432 LWKELQSLRVVSCKHIKDSEI 452
L+ L ++ C+ I +S +
Sbjct: 370 SCPRLKELALLYCQRIGNSAL 390
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 30/227 (13%)
Query: 268 VSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELT--FCDHRMDDGWLAA 325
VS +GL LAQ C L L+L GC G+ A+GK C+ LEEL FC+ D G +
Sbjct: 153 VSSVGLCSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDL 212
Query: 326 LSYC-ENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAM------ 378
+ C ++LK++ + +I LE C LE L+L + DK IA
Sbjct: 213 VVGCSKSLKSIGVAASAKITDLS-LEAVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRL 271
Query: 379 -------FSVCRTAREIILQDCWGL------------DNSMFSLAVICRRVKLICLEGCS 419
SV A + + C L D M ++ +++K + L C
Sbjct: 272 KNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCY 331
Query: 420 LLTTEGLESVIHLWKELQSLRVVSCKHIKDSEISPALATSFTTLKEL 466
++ +GLE++ H KEL+ + + C +I I A+ S LKEL
Sbjct: 332 FVSCKGLEAIAHGCKELERVEINGCHNIGTRGI-EAIGKSCPRLKEL 377
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 101/191 (52%), Gaps = 16/191 (8%)
Query: 193 DNGLSALASGCPNLRRVQVVGASEMG---LLSVAEECPTLQELELQMC---SDNVLRGIA 246
D + ++A GC NL+++ + E+G ++S+ + C +L EL L+ C + L I
Sbjct: 413 DIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIG 472
Query: 247 ACVNLQILKLVGNVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFD-GIKAIGKCC 305
+LQ L NV G + +SD G+T +A+GC +L L++S + D + +G+ C
Sbjct: 473 KGCSLQQL----NVSG--CNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGC 526
Query: 306 QMLEE--LTFCDHRMDDGWLAALSYCENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLH 363
ML++ L+ C H D+G + C+ L+T C I G+ + SCP ++++
Sbjct: 527 PMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITS-AGVATVVSSCPHIKKVL 585
Query: 364 LQKCQLRDKKS 374
++K ++ ++ +
Sbjct: 586 IEKWKVTERTT 596
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 171/393 (43%), Gaps = 68/393 (17%)
Query: 97 PDSQRNSNSLVCKRWLNLQGRLVRSIRILDWNFLLSGRLIHRFPNLNHVDL--------V 148
D + LVCKRWLNLQ + + +L RL RF + +DL
Sbjct: 24 SDKDKEVFGLVCKRWLNLQSTDRKKLAARAGPHMLR-RLASRFTQIVELDLSQSISRSFY 82
Query: 149 PGSLISPKSSCILIGN-----RVLSMH-----IDSG-SSPNWCFCEENMLPV----EVID 193
PG S +I RVL++H D+G +S C L V ++ D
Sbjct: 83 PG---VTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSD 139
Query: 194 NGLSALASGCPNLRRVQVVGA---SEMGLLSVAEECPTLQELELQMCSDNVLRGIAACVN 250
GLSA+A GC +LR + + G ++ L S++E C L+ L LQ C++
Sbjct: 140 KGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTN----------- 188
Query: 251 LQILKLVGNVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFD-GIKAIGK-CCQML 308
++D GL L +GC+++ L+++ C D G+ ++ K C L
Sbjct: 189 -----------------ITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSL 231
Query: 309 EELTFCD-HRMDDGWLAALS-YCENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQK 366
+ L D +++ + +++L+ +C+NL+TL C+ I + + +L+ L +
Sbjct: 232 KTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDW 291
Query: 367 CQLRDKKSIAAMFSVCRTAREIILQDCWGLDNSMF----SLAVICRRVKLICLEGCSLLT 422
C S++ + C+ + + C + ++ F S V+ +K++ + C+ +T
Sbjct: 292 CLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVL--GLKVLKVSNCTKIT 349
Query: 423 TEGLESVIHLWKELQSLRVVSCKHIKDSEISPA 455
G+ ++ L+ + V S H+ + S A
Sbjct: 350 VTGIGKLLDKCSSLEYIDVRSLPHVTEVRCSEA 382
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 52/206 (25%)
Query: 263 FYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFD-GIKAIGKCCQMLEELTFCDHRMDDG 321
FY V +D L ++++G K L L L C+G D G+ +IG+C +L+ L
Sbjct: 81 FYPGV-TDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLD--------- 130
Query: 322 WLAALSYCENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSV 381
+SYC L GL C L LHL C+
Sbjct: 131 ----VSYCRKL------------SDKGLSAVAEGCHDLRALHLAGCR------------- 161
Query: 382 CRTAREIILQDCWGLDNSMFSLAVICRRVKLICLEGCSLLTTEGLESVIHLWKELQSLRV 441
+ D S+ SL+ CR ++ + L+GC+ +T GL ++ ++++SL +
Sbjct: 162 ------------FITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDI 209
Query: 442 VSCKHIKDSEISPALATSFTTLKELK 467
C ++ D+ +S ++LK LK
Sbjct: 210 NKCSNVGDAGVSSVAKACASSLKTLK 235
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 115/246 (46%), Gaps = 17/246 (6%)
Query: 191 VIDNGLSALASGCPNLRRVQVVGA---SEMGLLSVAEECPTLQELELQMC---SDNVLRG 244
V D +SA+A C NL +++ +E GL S+ +QEL+L C +D L
Sbjct: 364 VTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEY 423
Query: 245 IAACVNLQILKLVGNVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEG-SFDGIKAIGK 303
I+ C NLQ LKL G +++ SD G+ + C +L++L+L C G DG+ A+ +
Sbjct: 424 ISKCSNLQRLKL-----GLCTNI-SDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSR 477
Query: 304 CCQMLEEL--TFCDHRMDDGWLAALSYCENLKTLKFQSCKRIDQKPGLEEYLGSCPALER 361
C+ L L ++C D G + + E L L+ + K I GL C L
Sbjct: 478 GCKSLNRLILSYCCELTDTG-VEQIRQLELLSHLELRGLKNI-TGVGLAAIASGCKKLGY 535
Query: 362 LHLQKCQLRDKKSIAAMFSVCRTAREIILQDCWGLDNSMFSLAVICRRVKLICLEGCSLL 421
L ++ C+ D A+ + R+I L +C D ++ L RV+ + L S +
Sbjct: 536 LDVKLCENIDDSGFWALAYFSKNLRQINLCNCSVSDTALCMLMSNLSRVQDVDLVHLSRV 595
Query: 422 TTEGLE 427
T EG E
Sbjct: 596 TVEGFE 601
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 163/392 (41%), Gaps = 70/392 (17%)
Query: 101 RNSNSLVCKRWLNLQGRLVRSIRILDWNFLLSGRLIHRFPNLNHVDLVPGSLISPKSSCI 160
R + L+ K +L + +IRIL FL + L+ ++PNL+ +DL + PK
Sbjct: 28 RKTWRLISKDFLRVDSLTRTTIRILRVEFLPT--LLFKYPNLSSLDLS----VCPK---- 77
Query: 161 LIGNRVLSMHIDSGSSPNWCFCEENMLPVEVIDNGLSALASGCPNLRRVQV-----VGAS 215
L + VL + +D S V GL LA C L RV V G
Sbjct: 78 LDDDVVLRLALDGAISTLGIKSLNLSRSTAVRARGLETLARMCHALERVDVSHCWGFGDR 137
Query: 216 EMGLLSVAEECPTLQELELQMC---SD-NVLRGIAACVNLQILKLVGNVDGFYSSVVSDI 271
E LS A L+EL++ C SD + R + C NL + L + +SD+
Sbjct: 138 EAAALSSA---TGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLK------WCMEISDL 188
Query: 272 GLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDH----RMDDGWLAALS 327
G+ +L + CK L L++S + + D I++I +L +L D +DDG L
Sbjct: 189 GIDLLCKICKGLKSLDVSYLKITNDSIRSIA----LLVKLEVLDMVSCPLIDDG---GLQ 241
Query: 328 YCEN----LKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKC-------------QLR 370
+ EN L+ + C R+ GL + P ++ L C L+
Sbjct: 242 FLENGSPSLQEVDVTRCDRV-SLSGLISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGLK 300
Query: 371 DKKSI------------AAMFSVCRTAREIILQDCWGL-DNSMFSLAVICRRVKLICLEG 417
K+I ++ S CR+ EI L C + D M SLA C +K + L
Sbjct: 301 HLKTIWIDGAHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLAC 360
Query: 418 CSLLTTEGLESVIHLWKELQSLRVVSCKHIKD 449
C +T + +V + L +L++ SC I +
Sbjct: 361 CGFVTDVAISAVAQSCRNLGTLKLESCHLITE 392
>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
chr2:10848018-10850275 REVERSE LENGTH=628
Length = 628
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 127/275 (46%), Gaps = 21/275 (7%)
Query: 191 VIDNGLSALASGCPNLRRVQVVGA---SEMGLLSVAEECPTLQELELQMCSDNVLRGIAA 247
V D GL ++ GCPN+++ + + S+ GL+S A+ +L+ L+L+ C G
Sbjct: 348 VTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEECHRVTQFGFFG 407
Query: 248 CVNLQILKLVGNVDGFYSSVVSDIGLTILAQG------CKRLVKLELSGCEGSFDG-IKA 300
+L + F S+V+ + + L G C L L + C G D + A
Sbjct: 408 ----SLLNCGEKLKAF--SLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPGFGDANLAA 461
Query: 301 IGKCCQMLEELTFCDHR--MDDGWLAALSYCENLKTLKFQSCKRIDQKPGLEEYLGSCPA 358
IGK C LE++ C + + G+L + +L + F C + + +
Sbjct: 462 IGKLCPQLEDIDLCGLKGITESGFLHLIQ--SSLVKINFSGCSNLTDRVISAITARNGWT 519
Query: 359 LERLHLQKCQLRDKKSIAAMFSVCRTAREIILQDCWGLDNSMFSLAVICR-RVKLICLEG 417
LE L++ C S+ ++ + C+ ++ + C D+ + +LA + +++++ + G
Sbjct: 520 LEVLNIDGCSNITDASLVSIAANCQILSDLDISKCAISDSGIQALASSDKLKLQILSVAG 579
Query: 418 CSLLTTEGLESVIHLWKELQSLRVVSCKHIKDSEI 452
CS++T + L +++ L L L + C+ I +S +
Sbjct: 580 CSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNSTV 614
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 205 NLRRVQVVGASEMGLLSVAEECPTLQELELQMCSDNVLRGIAACVNLQILKLVGNVDGFY 264
++R S++GL S+ CP+L L L +
Sbjct: 155 SIRGSNSAKVSDLGLRSIGRSCPSLGSLSL----------------------------WN 186
Query: 265 SSVVSDIGLTILAQGCKRLVKLELSGCEGSFD-GIKAIGKCCQMLEELTF--CDHRMDDG 321
S ++D GL +A+GC +L KLEL+ C D G+ AI K C L ELT C D+G
Sbjct: 187 VSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEG 246
Query: 322 WLAALSYCENLKTLKFQSCKRIDQKPGLEEYLGSCP-ALERLHLQKCQLRDKKSIAAMFS 380
LA C LK++ ++C + + G+ L + +L +L LQ + D S+A +
Sbjct: 247 LLAIARSCSKLKSVSIKNCPLV-RDQGIASLLSNTTCSLAKLKLQMLNVTD-VSLAVVGH 304
Query: 381 VCRTAREIILQDCWGLDNSMF---SLAVICRRVKLICLEGCSLLTTEGLESV 429
+ +++L + F V +++ + + C +T GLESV
Sbjct: 305 YGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESV 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 259 NVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFD-GIKAIGKCCQMLE--ELTFCD 315
++ G S+ VSD+GL + + C L L L D G+ I + C LE EL C
Sbjct: 155 SIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCS 214
Query: 316 HRMDDGWLAALSYCENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSI 375
D G +A C NL L ++C RI + GL SC L+ + ++ C L + I
Sbjct: 215 TITDKGLVAIAKSCPNLTELTLEACSRIGDE-GLLAIARSCSKLKSVSIKNCPLVRDQGI 273
Query: 376 AAMFS--VCRTAREIILQDCWGLDNSMFSLAVICRRVKLICLEGCSLLTTEG---LESVI 430
A++ S C A+ + LQ D S+ + + + L G S ++ +G + + +
Sbjct: 274 ASLLSNTTCSLAK-LKLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGV 332
Query: 431 HLWKELQSLRVVSCKHIKD 449
L K L SL + +C+ + D
Sbjct: 333 GLQK-LNSLTITACQGVTD 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 63/296 (21%)
Query: 189 VEVIDNGLSALASGCPNLRRV---QVVGASEMGLLSVAEECPTLQELELQMCSDNVLRGI 245
+V D GL ++ CP+L + V ++ GLL +AE C L++LEL C
Sbjct: 162 AKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRC-------- 213
Query: 246 AACVNLQILKLVGNVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFD-GIKAIGKC 304
S ++D GL +A+ C L +L L C D G+ AI +
Sbjct: 214 --------------------STITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARS 253
Query: 305 CQMLEELTF--CDHRMDDGWLAALSYCE-NLKTLKFQSCKRIDQK--------------- 346
C L+ ++ C D G + LS +L LK Q D
Sbjct: 254 CSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQMLNVTDVSLAVVGHYGLSITDLV 313
Query: 347 -PGLEE-------YLGSCPALERLH---LQKCQLRDKKSIAAMFSVCRTAREIILQDCWG 395
GL +G+ L++L+ + CQ + ++ C ++ I+
Sbjct: 314 LAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPL 373
Query: 396 L-DNSMFSLAVICRRVKLICLEGCSLLTTEG-LESVIHLWKELQSLRVVSCKHIKD 449
L DN + S A ++ + LE C +T G S+++ ++L++ +V+C I+D
Sbjct: 374 LSDNGLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRD 429
>AT5G01720.1 | Symbols: | RNI-like superfamily protein |
chr5:267118-270391 REVERSE LENGTH=665
Length = 665
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 162/382 (42%), Gaps = 40/382 (10%)
Query: 99 SQRNSNSLVCKRWLNLQGRLVRSIRILDWNFLLSGRLIHRFPNLNHVDLVPGSLISPKSS 158
S S SL CK + L+ + S++ L ++L R++ R+ N +DL ++ +
Sbjct: 33 SDLKSFSLTCKSFYQLESKHRGSLKPLRSDYL--PRILTRYRNTTDLDLTFCPRVTDYAL 90
Query: 159 CI---LIGNRVLSMHIDSGSSPNWCFCEENMLPVEVIDNGLSALASGCPNLRRVQVVGAS 215
+ L G + S+ + S + GL LA C NL + + A+
Sbjct: 91 SVVGCLSGPTLRSLDLSRSGSFSAA--------------GLLRLALKCVNLVEIDLSNAT 136
Query: 216 EM--GLLSVAEECPTLQELELQMCSDNVLRGIAACVNLQILKLVGNVDGFYSSVVSDIGL 273
EM +V E +L+ L+L C GI C+ + KL V + V D+G+
Sbjct: 137 EMRDADAAVVAEARSLERLKLGRCKMLTDMGIG-CIAVGCKKL-NTVSLKWCVGVGDLGV 194
Query: 274 TILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHR-------MDDGWLAAL 326
+LA CK + L+LS + GKC + +L + +DD L +L
Sbjct: 195 GLLAVKCKDIRTLDLSY-------LPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSL 247
Query: 327 SY-CENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTA 385
+ C++LK L SC+ + + GL L L+RL L C A+
Sbjct: 248 RHDCKSLKKLDASSCQNLTHR-GLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSAL 306
Query: 386 REIILQDCWGLDNSMFSLAVICRRVKLICLEGCSLLTTEGLESVIHLWKELQSLRVVSCK 445
+ I L C + + ++ +C +K + L C +T EGL S++ K+L+ L + C+
Sbjct: 307 QSIRLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDITCCR 366
Query: 446 HIKDSEISPALATSFTTLKELK 467
+ I+ +A S L LK
Sbjct: 367 KLSRVSITQ-IANSCPLLVSLK 387
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 36/267 (13%)
Query: 189 VEVIDNGLSALASGCPNLRRVQVV---GASEMGLLSVAEECPTLQELELQMCSDNVLRGI 245
V V D GLS+L +LR++ + S + + +A CP L L+++ CS
Sbjct: 340 VSVTDEGLSSLVMKLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMESCSLVSREAF 399
Query: 246 ----AACVNLQILKLVGNV---DGFYSSV---------------VSDIGLTILAQGCKRL 283
C L+ L L N +G S ++D GL+ + GC L
Sbjct: 400 WLIGQKCRLLEELDLTDNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNL 459
Query: 284 VKLELSGCEGSFD-GIKAIGKCCQMLE--ELTFCDHRMDDGWLAALSYCENLKTLKFQSC 340
+L+L G D GI I + C LE +++C + D L +LS C L+T + + C
Sbjct: 460 RELDLYRSVGITDVGISTIAQGCIHLETINISYC-QDITDKSLVSLSKCSLLQTFESRGC 518
Query: 341 KRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTAREIILQDCWGLDNSM 400
I + GL C L ++ L+KC + + A+ + ++I + D + +
Sbjct: 519 PNITSQ-GLAAIAVRCKRLAKVDLKKCPSINDAGLLALAHFSQNLKQINVSDTAVTEVGL 577
Query: 401 FSLAVICRRVKLICLEGCSLLTTEGLE 427
SLA I CL+ +++ + GL
Sbjct: 578 LSLANIG------CLQNIAVVNSSGLR 598
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 32/252 (12%)
Query: 218 GLLSVAEECPTLQELELQMCSDNVLRGIAACVNLQILKLVGNVDGFYSSVVSDIGLTILA 277
GL ++ C +L+E+ L C G+++ V LK + +D +S + +T +A
Sbjct: 320 GLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLV--MKLKDLRKLDITCCRKLSRVSITQIA 377
Query: 278 QGCKRLVKLELSGCE-GSFDGIKAIGKCCQMLEELTFCDHRMDDGWLA------------ 324
C LV L++ C S + IG+ C++LEEL D+ +DD L
Sbjct: 378 NSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTDNEIDDEGLKSISSCLSLSSLK 437
Query: 325 ----------ALSY----CENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLR 370
LSY C NL+ L I G+ C LE +++ CQ
Sbjct: 438 LGICLNITDKGLSYIGMGCSNLRELDLYRSVGI-TDVGISTIAQGCIHLETINISYCQDI 496
Query: 371 DKKSIAAMFSVCRTAREIILQDCWGL-DNSMFSLAVICRRVKLICLEGCSLLTTEGLESV 429
KS+ ++ S C + + C + + ++AV C+R+ + L+ C + GL ++
Sbjct: 497 TDKSLVSL-SKCSLLQTFESRGCPNITSQGLAAIAVRCKRLAKVDLKKCPSINDAGLLAL 555
Query: 430 IHLWKELQSLRV 441
H + L+ + V
Sbjct: 556 AHFSQNLKQINV 567
>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 219 LLSVAEECPTLQELELQM----CSDNVLRGIA-ACVNLQILKLVGNVDGFYSSVVSDIGL 273
+LS+A + LQ L L+ DN + IA C LQ ++D SS ++D L
Sbjct: 82 VLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQ------DLDLSKSSKITDHSL 135
Query: 274 TILAQGCKRLVKLELSGCEGSFD-GIKAIGKCCQMLEELTFCD--HRMDDGWLAAL-SYC 329
LA+GC L KL LSGC D + + + C+ L+ L C + D L A+ C
Sbjct: 136 YSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENC 195
Query: 330 ENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTAREII 389
L++L C+ I G+ CP L L L C L +S+ A+ + C R +
Sbjct: 196 NQLQSLNLGWCENISDD-GVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLG 254
Query: 390 LQDCWGL-DNSMFSLA 404
L C + D +M+SLA
Sbjct: 255 LYYCRNITDRAMYSLA 270
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
protein | chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 219 LLSVAEECPTLQELELQM----CSDNVLRGIA-ACVNLQILKLVGNVDGFYSSVVSDIGL 273
+LS+A + LQ L L+ DN + IA C LQ ++D SS ++D L
Sbjct: 82 VLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQ------DLDLSKSSKITDHSL 135
Query: 274 TILAQGCKRLVKLELSGCEGSFD-GIKAIGKCCQMLEELTFCD--HRMDDGWLAAL-SYC 329
LA+GC L KL LSGC D + + + C+ L+ L C + D L A+ C
Sbjct: 136 YSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENC 195
Query: 330 ENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTAREII 389
L++L C+ I G+ CP L L L C L +S+ A+ + C R +
Sbjct: 196 NQLQSLNLGWCENISDD-GVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLG 254
Query: 390 LQDCWGL-DNSMFSLA 404
L C + D +M+SLA
Sbjct: 255 LYYCRNITDRAMYSLA 270
>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
chr5:8794842-8796882 REVERSE LENGTH=623
Length = 623
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 190 EVIDNGLSALASGCPNLRRV---QVVGASEMGLLSVAEECPTLQELELQMC---SDNVLR 243
+V D GL A+A GCP+LR V + S++GL +A CP +++L+L C +D+ L
Sbjct: 153 KVTDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLV 212
Query: 244 GIAA-CVNLQILKL-----VGNVDGFYSSV----------------VSDIGLT-ILAQGC 280
IA CVNL L + VGN +G + + D G+ +LAQ
Sbjct: 213 AIAENCVNLSDLTIDSCSGVGN-EGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAG 271
Query: 281 KRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDHRM----DDGW--LAALSYCENLKT 334
L K++L S + IG + +L H + + G+ + + LK+
Sbjct: 272 SYLTKVKLQMLNVSGLSLAVIGHYGAAVTDLVL--HGLQGVNEKGFWVMGNAKGLKKLKS 329
Query: 335 LKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTAREIILQDC 393
L SC+ + GLE CP L+ + L KC L K + A+ + + L++C
Sbjct: 330 LSVMSCRGM-TDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEEC 387
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 138/303 (45%), Gaps = 47/303 (15%)
Query: 181 FCEENMLPVEVIDNGLSALASGCPN---LRRVQVVGA------SEMGLLSVAEECPTLQE 231
F ++ + D L+A+A G + L ++Q+ G+ +++GL +VA CP+L+
Sbjct: 112 FLSRSLEGKKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTDVGLGAVAHGCPSLR- 170
Query: 232 LELQMCSDNVLRGIAACVNLQILKLVGNVDGFYSSVVSDIGLTILAQGCKRLVKLELSGC 291
I + NL VSD+GL+ +A+ C + KL+LS C
Sbjct: 171 -------------IVSLWNLP--------------AVSDLGLSEIARSCPMIEKLDLSRC 203
Query: 292 EGSFD-GIKAIGKCCQMLEELTF--CDHRMDDGWLAALSYCENLKTLKFQSCKRIDQKPG 348
G D G+ AI + C L +LT C ++G A C NL+++ +SC RI + G
Sbjct: 204 PGITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQ-G 262
Query: 349 LEEYLGSCPA-LERLHLQKCQLRDKKSIAAMFSVCRTAREIILQDCWGLDNSMF---SLA 404
+ L + L ++ LQ + S+A + +++L G++ F A
Sbjct: 263 VAFLLAQAGSYLTKVKLQMLNV-SGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNA 321
Query: 405 VICRRVKLICLEGCSLLTTEGLESVIHLWKELQSLRVVSCKHIKDSEISPALATSFTTLK 464
+++K + + C +T GLE+V + +L+ + + C + + ALA S +L+
Sbjct: 322 KGLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGL-VALAKSALSLE 380
Query: 465 ELK 467
LK
Sbjct: 381 SLK 383
>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
chr1:7497479-7499386 FORWARD LENGTH=360
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 219 LLSVAEECPTLQELELQM----CSDNVLRGIA-ACVNLQILKLVGNVDGFYSSVVSDIGL 273
+LS+ + LQ L L+ DN + IA C LQ L L ++ ++D L
Sbjct: 82 VLSLVPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLK------ITDRSL 135
Query: 274 TILAQGCKRLVKLELSGCEGSFD-GIKAIGKCCQMLEELTFCD--HRMDDGWLAAL-SYC 329
LA GC L KL LSGC D I + + C+ L+ L C + D L A+ + C
Sbjct: 136 YALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNC 195
Query: 330 ENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTAREII 389
+++L C+ I G+ CP L L L C L +S+ A+ C R +
Sbjct: 196 NQMQSLNLGWCENISDD-GVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLG 254
Query: 390 LQDCWGL-DNSMFSLA 404
L C + D +M+SLA
Sbjct: 255 LYYCRNITDRAMYSLA 270
>AT3G07550.2 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 150/377 (39%), Gaps = 92/377 (24%)
Query: 99 SQRNSNSLVCKRWLNLQGRLVRSIR------ILDWNFLLSG----------RLIHRFPNL 142
+ +S L C RWLN+Q RS++ +L+ + L RL+ RF L
Sbjct: 34 ADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLNPSSLSQTNPDVSSHHLHRLLTRFQWL 93
Query: 143 NHVDLVPGSLISPKS--SCILIGNRVLSMHIDSGSSPNWCFCEENMLPVEVIDNGLSALA 200
H+ L ++++ S S G R+ ++++D CF + D+G+S +A
Sbjct: 94 EHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDC------CF--------GISDDGISTIA 139
Query: 201 SGCPNLRRVQVV--GASEMGLLSVAEECPTLQELELQMCSDNVLRGIAACVNLQILKLVG 258
S CPNL V + S++GL ++A +L+ CVNL
Sbjct: 140 SFCPNLSVVSLYRCNISDIGLETLARASLSLK-----------------CVNLS------ 176
Query: 259 NVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIG----------KCCQM- 307
Y +VSD G+ L+Q C +L +++S C+ S G+ G CQ+
Sbjct: 177 -----YCPLVSDFGIKALSQACLQLESVKISNCK-SITGVGFSGCSPTLGYVDADSCQLE 230
Query: 308 ------------LEELTF----CDHRMDDGWLAALSYCENLKTLKFQSCKRIDQKPGLEE 351
+E L C R D L+ L + C+ + + +E
Sbjct: 231 PKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDE-SIEA 289
Query: 352 YLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTAREIILQDCWGL-DNSMFSLAVICRRV 410
CP L+ +L C A+ CR +++ + C L D + +L C +
Sbjct: 290 IAKGCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNL 349
Query: 411 KLICLEGCSLLTTEGLE 427
+++ + G + LT +E
Sbjct: 350 QILYMNGNARLTPTAIE 366
>AT3G07550.1 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 150/377 (39%), Gaps = 92/377 (24%)
Query: 99 SQRNSNSLVCKRWLNLQGRLVRSIR------ILDWNFLLSG----------RLIHRFPNL 142
+ +S L C RWLN+Q RS++ +L+ + L RL+ RF L
Sbjct: 34 ADHDSFGLTCHRWLNIQNISRRSLQFQCSFSVLNPSSLSQTNPDVSSHHLHRLLTRFQWL 93
Query: 143 NHVDLVPGSLISPKS--SCILIGNRVLSMHIDSGSSPNWCFCEENMLPVEVIDNGLSALA 200
H+ L ++++ S S G R+ ++++D CF + D+G+S +A
Sbjct: 94 EHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDC------CF--------GISDDGISTIA 139
Query: 201 SGCPNLRRVQVV--GASEMGLLSVAEECPTLQELELQMCSDNVLRGIAACVNLQILKLVG 258
S CPNL V + S++GL ++A +L+ CVNL
Sbjct: 140 SFCPNLSVVSLYRCNISDIGLETLARASLSLK-----------------CVNLS------ 176
Query: 259 NVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIG----------KCCQM- 307
Y +VSD G+ L+Q C +L +++S C+ S G+ G CQ+
Sbjct: 177 -----YCPLVSDFGIKALSQACLQLESVKISNCK-SITGVGFSGCSPTLGYVDADSCQLE 230
Query: 308 ------------LEELTF----CDHRMDDGWLAALSYCENLKTLKFQSCKRIDQKPGLEE 351
+E L C R D L+ L + C+ + + +E
Sbjct: 231 PKGITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDE-SIEA 289
Query: 352 YLGSCPALERLHLQKCQLRDKKSIAAMFSVCRTAREIILQDCWGL-DNSMFSLAVICRRV 410
CP L+ +L C A+ CR +++ + C L D + +L C +
Sbjct: 290 IAKGCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGLLALRCGCMNL 349
Query: 411 KLICLEGCSLLTTEGLE 427
+++ + G + LT +E
Sbjct: 350 QILYMNGNARLTPTAIE 366
>AT4G33210.1 | Symbols: SLOMO | F-box family protein |
chr4:16015971-16020697 REVERSE LENGTH=990
Length = 990
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 112/276 (40%), Gaps = 49/276 (17%)
Query: 202 GCPNLRRVQVVGASEM---GLLSVAEECPTLQELELQMCS---DNVLRGIA-ACVNLQIL 254
CP L+ + + ++ + S A CP L+ L++ CS D LR IA AC NL IL
Sbjct: 367 NCPLLQLLDIASCHKLLDAAIRSAAISCPQLESLDVSNCSCVSDETLREIAQACANLHIL 426
Query: 255 KLVGNVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEG-SFDGIKAIGKC--------- 304
+S +I L + L L+L CEG + + I
Sbjct: 427 N---------ASYCPNISLE--SVHLPMLTVLKLHSCEGITSASMTWIANSPALEVLELD 475
Query: 305 -CQMLEELTFCDHRMDDGWLAALSYCENLKTLKFQSCK----RIDQKPGLEEYLGSCPAL 359
C +L ++ R+ +L +C L QS + P L + AL
Sbjct: 476 NCNLLTTVSLHLSRLQS---ISLVHCRKFTDLNLQSIMLSSITVSNCPALRRITITSNAL 532
Query: 360 ERLHLQKCQLRDKKSIAAMFSVCRTAREIILQDCWGLDNS---MFSLAVICRRVKLICLE 416
RL LQK ++++ + C + +E+ L DC L NS +FS C +K + L+
Sbjct: 533 RRLALQK-----QENLTTLVLQCHSLQEVDLSDCESLSNSVCKIFSDDGGCPMLKSLILD 587
Query: 417 GCSLLTTEGLESVIHLWKELQSLRVVSCKHIKDSEI 452
C E L +V L SL +V C+ + E+
Sbjct: 588 NC-----ESLTAVRFCNSSLASLSLVGCRAVTSLEL 618
>AT3G58530.1 | Symbols: | RNI-like superfamily protein |
chr3:21645759-21648219 FORWARD LENGTH=353
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 205 NLRRVQVVGASEMGLLSVAEECP----TLQELELQMC---SDNVLRGIAA-CVNLQILKL 256
NL Q V S + L V ECP +L+ L L +C SDN + I + C L++ +
Sbjct: 87 NLEFAQGVVDSHLKL--VKTECPDALLSLEWLNLNVCQKISDNGIEAITSICPKLKVFSI 144
Query: 257 VGNVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFD-GIKAIGKCCQMLEEL--TF 313
NV V+D G+ L + C+ + L LSGC+ D ++ + + LE L T
Sbjct: 145 YWNVR------VTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNITR 198
Query: 314 CDHRMDDGWLAALSYCENLKTLKFQSCKRIDQKPGLE 350
C DDG L L C +L+TL + K ++
Sbjct: 199 CVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMK 235
>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
chr1:17276103-17277659 REVERSE LENGTH=518
Length = 518
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 120/298 (40%), Gaps = 56/298 (18%)
Query: 189 VEVIDNGLSALASGCPNLRRVQVVGASEM---GLLSVAEECPTLQELELQMCSDNVLRGI 245
V + D L ++ C NL+R+++ E+ G+ + AE C L+ C D +G+
Sbjct: 115 VSIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSC-DFGAKGV 173
Query: 246 AA----CVNLQ---ILKLVGNVD--------GFYSSVVSDIGLTILAQ---------GCK 281
A C NL+ I +L G D G +S + I L L G K
Sbjct: 174 KAVLDHCSNLEELSIKRLRGFTDIAPEMIGPGVAASSLKSICLKELYNGQCFGPVIVGAK 233
Query: 282 RLVKLELSGCEGSFDGIKAIGKCCQMLEELTFCDH----------RMDDGWLAALSYCEN 331
L L+L C G +D +L+E++ DH ++ D L+A+SYC +
Sbjct: 234 NLKSLKLFRCSGDWD---------LLLQEMSGKDHGVVEIHLERMQVSDVALSAISYCSS 284
Query: 332 LKTL---KFQSCKRIDQKPGLEEYLGSCPALERLHLQ--KCQLRDKKSIAAMFSVCRTAR 386
L++L K C GL C L +LH+ K L + + A+ C +
Sbjct: 285 LESLHLVKTPECTNF----GLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQ 340
Query: 387 EIILQDCWGLDNSMFSLAVICRRVKLICLEGCSLLTTEGLESVIHLWKELQSLRVVSC 444
E++L S+ LA C ++ + L GC L + L+ L + +C
Sbjct: 341 ELVLIGVNPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNC 398
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 34/185 (18%)
Query: 189 VEVIDNGLSALASGCPNLRRVQVVGASE---MGLLSVAEECPTLQELELQMCSDNVLRGI 245
++V D LSA+ S C +L + +V E GL ++AE+C L++L
Sbjct: 269 MQVSDVALSAI-SYCSSLESLHLVKTPECTNFGLAAIAEKCKRLRKL------------- 314
Query: 246 AACVNLQILKLVGNVDGFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCC 305
++DG+ ++++ D GL +A+ C +L +L L G + + + C
Sbjct: 315 -------------HIDGWKANLIGDEGLVAVAKFCSQLQELVLIGVNPTTLSLGMLAAKC 361
Query: 306 QMLEELTFC--DHRMDDGWLAALSYCENLKTLKFQSCKRIDQKPGLEEYLGSCPALERLH 363
LE L C D D + C L+ L ++C D G+E CP L ++
Sbjct: 362 LNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNCPISD--VGIENLANGCPGLTKVK 419
Query: 364 LQKCQ 368
++KC+
Sbjct: 420 IKKCK 424