Miyakogusa Predicted Gene

Lj3g3v3724400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3724400.1 tr|A8IXN6|A8IXN6_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_94881,69.7,1e-17,AAA_17,NULL; seg,NULL; P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NUL,CUFF.46221.1
         (455 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G61450.1 | Symbols:  | P-loop containing nucleoside triphosph...   541   e-154

>AT5G61450.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:24710240-24712882
           REVERSE LENGTH=447
          Length = 447

 Score =  541 bits (1393), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 278/415 (66%), Positives = 308/415 (74%), Gaps = 10/415 (2%)

Query: 40  SFPSV--NTRNASSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHXXXXXXXX 97
           SF SV  + RNASSKYDFVKVKVWLGDNADHYYVLSRFL+ RMLTVTKIPNH        
Sbjct: 37  SFSSVPSSPRNASSKYDFVKVKVWLGDNADHYYVLSRFLVCRMLTVTKIPNHEAIKISLE 96

Query: 98  XXXXXVDNSLLDVSQSDLEVNLFKLMERRGYGEEYINRYKMMTSFHHQRVPLVILVCGTA 157
                +DNSLLDVSQSDLE NLFKLMERRGYGEEYINRY MMT FHHQRVPLVILVCGTA
Sbjct: 97  LKKLLIDNSLLDVSQSDLETNLFKLMERRGYGEEYINRYNMMTKFHHQRVPLVILVCGTA 156

Query: 158 CVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLASTPVWARDFSSSEELITEFCR 217
           CVGKSTIATQLAQRLNLPNVLQTDMVYELLRT+TDAPL STPVW R+F SSEELITEFCR
Sbjct: 157 CVGKSTIATQLAQRLNLPNVLQTDMVYELLRTATDAPLTSTPVWTREFGSSEELITEFCR 216

Query: 218 ECRVVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLVDDEQKSPEVDAENKAVNPTS--- 274
           ECR+VRKGL GDLKKAMKDGKPIIIEG HLDPSIYL++DE K+P  D E  +    S   
Sbjct: 217 ECRIVRKGLGGDLKKAMKDGKPIIIEGRHLDPSIYLMNDENKTPSNDPEKSSSETNSSKD 276

Query: 275 VTSDDNATVQINNIHVGGGDERISSSNEGVSVAQVDAVSNSMASIGLIGNISGRKGASLK 334
           +TSD N     +N            S+E  +VA V+A + S        +    K A  K
Sbjct: 277 LTSDKNPEASSSNTKETDNSAVKPHSHEE-AVASVEANNLSEKVTQCTIDAESSKDAEKK 335

Query: 335 ELETDKTAVNKDKSGPKPIVVPIVLKMAEFDHKALLEEWIYTWTVNDKCPDLDDDKLIAN 394
               D +   K KSGP+PIV+ IVLKM+EFDHKALLEEWI + T  +K    + D+LI N
Sbjct: 336 SKSADGSG--KTKSGPEPIVISIVLKMSEFDHKALLEEWISSRTSGEKYTTKEKDRLITN 393

Query: 395 LKTIQDYLCSFTSQGLTVVNVSATTFPQALDWLHGYLLQCIEQGTSLGSHENVTP 449
           LKTI+DYLCSF SQG+TVVN+SATTFPQ LDWLH YLLQ IE+G  + S EN  P
Sbjct: 394 LKTIEDYLCSFNSQGVTVVNISATTFPQTLDWLHNYLLQRIEEG--IRSSENEAP 446