Miyakogusa Predicted Gene

Lj3g3v3711280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3711280.1 tr|D7M4Y3|D7M4Y3_ARALL A_IG002N01.11 protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_49045,46.1,9e-18,no
description,BTB/POZ fold; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.46366.1
         (251 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61600.1 | Symbols: ATPOB1, POB1 | POZ/BTB containin G-protei...   145   2e-35
AT3G61600.2 | Symbols: ATPOB1, POB1 | POZ/BTB containin G-protei...   145   2e-35
AT2G46260.1 | Symbols:  | BTB/POZ/Kelch-associated protein | chr...   143   1e-34
AT4G01160.1 | Symbols:  | BTB/POZ/Kelch-associated protein | chr...   108   3e-24

>AT3G61600.1 | Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1
           | chr3:22795704-22797953 FORWARD LENGTH=561
          Length = 561

 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/140 (58%), Positives = 100/140 (71%), Gaps = 12/140 (8%)

Query: 57  TTVVRVQTLRISSSILAAKTPSFSKLF-----DSKQRHYTLRINASEEAVLMELLKFMCS 111
           +TVVRV+ L ISS ILAAK+P F KLF     +S+QRH TLRINASEEA LMELL FM S
Sbjct: 148 STVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYS 207

Query: 112 DILEI-------DELLTADQFEVFGRMRQCCQRLQNSPMTLDSALFYLELPHTVRMADAI 164
           + + +       D L+ AD+FEV   MR C + L+N PMT +SAL YLELP +V MA A+
Sbjct: 208 NAVSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMAKAV 267

Query: 165 QPLTIAANKYLAAHYKDITR 184
           QPLT AA ++LAA YKDIT+
Sbjct: 268 QPLTDAAKQFLAARYKDITK 287


>AT3G61600.2 | Symbols: ATPOB1, POB1 | POZ/BTB containin G-protein 1
           | chr3:22795704-22798069 FORWARD LENGTH=561
          Length = 561

 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/140 (58%), Positives = 100/140 (71%), Gaps = 12/140 (8%)

Query: 57  TTVVRVQTLRISSSILAAKTPSFSKLF-----DSKQRHYTLRINASEEAVLMELLKFMCS 111
           +TVVRV+ L ISS ILAAK+P F KLF     +S+QRH TLRINASEEA LMELL FM S
Sbjct: 148 STVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYS 207

Query: 112 DILEI-------DELLTADQFEVFGRMRQCCQRLQNSPMTLDSALFYLELPHTVRMADAI 164
           + + +       D L+ AD+FEV   MR C + L+N PMT +SAL YLELP +V MA A+
Sbjct: 208 NAVSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPESALLYLELPSSVLMAKAV 267

Query: 165 QPLTIAANKYLAAHYKDITR 184
           QPLT AA ++LAA YKDIT+
Sbjct: 268 QPLTDAAKQFLAARYKDITK 287


>AT2G46260.1 | Symbols:  | BTB/POZ/Kelch-associated protein |
           chr2:18996111-18998463 FORWARD LENGTH=561
          Length = 561

 Score =  143 bits (360), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/140 (57%), Positives = 99/140 (70%), Gaps = 12/140 (8%)

Query: 57  TTVVRVQTLRISSSILAAKTPSFSKLF-----DSKQRHYTLRINASEEAVLMELLKFMCS 111
           +TVVRV+ L ISS ILAAK+P F KLF     +S+QRH TLRI+A EE  LMELL FM S
Sbjct: 146 STVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRISAQEEGALMELLNFMYS 205

Query: 112 DILEI-------DELLTADQFEVFGRMRQCCQRLQNSPMTLDSALFYLELPHTVRMADAI 164
           + L +       D L+ AD+FEV   MR C + L+N PMT DSAL YLELP +V MA+A+
Sbjct: 206 NSLSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPDSALLYLELPSSVLMAEAV 265

Query: 165 QPLTIAANKYLAAHYKDITR 184
           QPLT AA ++LA+ YKDIT+
Sbjct: 266 QPLTDAAKQFLASRYKDITK 285


>AT4G01160.1 | Symbols:  | BTB/POZ/Kelch-associated protein |
           chr4:494976-497006 REVERSE LENGTH=505
          Length = 505

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 128/227 (56%), Gaps = 52/227 (22%)

Query: 8   GGESVF-----NVSDKFLRIEIMADTATTFSIAGCS--------KRRPKEQVMN------ 48
           GG+  F     N SD+ LRIEI   +     I  CS        ++R +E ++N      
Sbjct: 7   GGDFRFAFNNVNFSDRLLRIEITQSSGEGEVI--CSSIVDWARDRKRRREDIVNENSNNK 64

Query: 49  --VYCSAAA-----------------STTVVRVQTLRISSSILAAKTPSFSKLF-----D 84
             V  +AA                  +T+V+ VQ L ISS+ILAAK+P F KLF     +
Sbjct: 65  TQVLVTAAEQEPKSGGEDENERLTNNNTSVLSVQELHISSAILAAKSPFFYKLFSNGMLE 124

Query: 85  SKQRHYTLRINASEEAVLMELLKFMCSDILEI-------DELLTADQFEVFGRMRQCCQR 137
           S+Q+  TL+I+ASEE  +MELLKFM S+ L +       D L+ AD+FEV   M+ C Q 
Sbjct: 125 SEQKQMTLKIDASEETAVMELLKFMYSNSLSVTASSALLDVLMVADKFEVASCMKYCSQL 184

Query: 138 LQNSPMTLDSALFYLELPHTVRMADAIQPLTIAANKYLAAHYKDITR 184
           L   PMTL+S+L  L+LP ++ MAD+++PLT AA +++A+ YK++++
Sbjct: 185 LLKMPMTLESSLLLLDLPSSLLMADSVKPLTNAARQFIASRYKNMSK 231