Miyakogusa Predicted Gene
- Lj3g3v3700170.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3700170.3 tr|G7IWS3|G7IWS3_MEDTR Actin related protein
OS=Medicago truncatula GN=MTR_3g030550 PE=3 SV=1,92.75,0,Actin-like
ATPase domain,NULL; Actin,Actin-like; ACTIN-RELATED PROTEIN,NULL;
ACTIN,Actin-like; no de,CUFF.46358.3
(194 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G60830.1 | Symbols: ATARP7, ARP7 | actin-related protein 7 | ... 340 3e-94
AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:6... 135 2e-32
AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18216539-18217947 F... 135 2e-32
AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3858116-3859609 F... 133 7e-32
AT2G42170.1 | Symbols: | Actin family protein | chr2:17578683-1... 131 3e-31
AT5G09810.1 | Symbols: ACT7 | actin 7 | chr5:3052809-3054220 FOR... 131 3e-31
AT5G59370.2 | Symbols: ACT4 | actin 4 | chr5:23950109-23951586 F... 129 1e-30
AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23950109-23951586 F... 129 1e-30
AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128567-17129981... 129 1e-30
AT3G53750.1 | Symbols: ACT3 | actin 3 | chr3:19915924-19917371 F... 129 1e-30
AT2G37620.2 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779761-1578... 129 1e-30
AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779761-1578... 129 1e-30
AT2G42100.1 | Symbols: | Actin-like ATPase superfamily protein ... 119 1e-27
AT2G42090.1 | Symbols: ACT9 | actin 9 | chr2:17556744-17558369 F... 107 5e-24
AT3G18780.1 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 | chr3:6... 101 3e-22
AT1G18450.1 | Symbols: ATARP4, ARP4 | actin-related protein 4 | ... 79 1e-15
AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | actin related protein... 71 4e-13
AT3G33520.1 | Symbols: ATARP6, ARP6, SUF3, ESD1 | actin-related ... 61 5e-10
AT5G56180.1 | Symbols: ATARP8, ARP8 | actin-related protein 8 | ... 53 1e-07
>AT3G60830.1 | Symbols: ATARP7, ARP7 | actin-related protein 7 |
chr3:22474298-22476000 FORWARD LENGTH=363
Length = 363
Score = 340 bits (873), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 156/193 (80%), Positives = 181/193 (93%), Gaps = 1/193 (0%)
Query: 2 DLTNFLAQELGKSNPLVNISLSDVEKIKEQYSCCAEDELAYQKTEHFCPVEKHTLPDGQV 61
+LT AQELGK+NP +N+S+SDVEK+KEQY+ CAEDE+AY+KT++ C +E+HTLPDGQV
Sbjct: 172 ELTKLFAQELGKTNPSMNLSMSDVEKLKEQYANCAEDEIAYKKTQN-CEIEQHTLPDGQV 230
Query: 62 ITIGRERYTVGEALFQPSLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMT 121
I+IGRERY+VGEALFQPS+LGL+ HGIVEQLVR ISTVSS+NHRQLLENTV+CGGT+SMT
Sbjct: 231 ISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMT 290
Query: 122 GFEDRFQKESNLSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKADY 181
GFE RFQKE+NL SSA++PTLVKPPEYMPENL MYSAWVGGAILAKVVFPQNQH+TKADY
Sbjct: 291 GFESRFQKEANLCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADY 350
Query: 182 DETGPSIVHRKCF 194
DETGPS+VHRKCF
Sbjct: 351 DETGPSVVHRKCF 363
>AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 |
chr3:6475535-6476832 FORWARD LENGTH=377
Length = 377
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 113/200 (56%), Gaps = 15/200 (7%)
Query: 2 DLTNFLAQELGKSNPLVNISLSD--VEKIKEQYSCCA---EDELAYQKTEHFCPVEK-HT 55
DLT++L + L + + + V IKE+ S A E E+ KT +EK +
Sbjct: 186 DLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTS--SSIEKNYE 243
Query: 56 LPDGQVITIGRERYTVGEALFQPSLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCG 115
LPDGQVITIG ER+ E LFQPS +G++A GI E +I D + L N V+ G
Sbjct: 244 LPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSG 303
Query: 116 GTSSMTGFEDRFQKE-SNLSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQ 174
GT+ +G DR KE + L+ S+++ +V PPE YS W+GG+ILA + Q
Sbjct: 304 GTTMFSGIADRMSKEITALAPSSMKIKVVAPPE------RKYSVWIGGSILASLSTFQQM 357
Query: 175 HITKADYDETGPSIVHRKCF 194
I+KA+YDE GP IVHRKCF
Sbjct: 358 WISKAEYDEAGPGIVHRKCF 377
>AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18216539-18217947
FORWARD LENGTH=377
Length = 377
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 113/200 (56%), Gaps = 15/200 (7%)
Query: 2 DLTNFLAQELGKSNPLVNISLSD--VEKIKEQYSCCA---EDELAYQKTEHFCPVEK-HT 55
DLT++L + L + + + V IKE+ S A E E+ KT +EK +
Sbjct: 186 DLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTS--SSIEKNYE 243
Query: 56 LPDGQVITIGRERYTVGEALFQPSLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCG 115
LPDGQVITIG ER+ E LFQPS +G++A GI E +I D + L N V+ G
Sbjct: 244 LPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSG 303
Query: 116 GTSSMTGFEDRFQKE-SNLSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQ 174
GT+ +G DR KE + L+ S+++ +V PPE YS W+GG+ILA + Q
Sbjct: 304 GTTMFSGIADRMSKEITALAPSSMKIKVVAPPE------RKYSVWIGGSILASLSTFQQM 357
Query: 175 HITKADYDETGPSIVHRKCF 194
I+KA+YDE GP IVHRKCF
Sbjct: 358 WISKAEYDEAGPGIVHRKCF 377
>AT3G12110.1 | Symbols: ACT11 | actin-11 | chr3:3858116-3859609
FORWARD LENGTH=377
Length = 377
Score = 133 bits (334), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 111/198 (56%), Gaps = 11/198 (5%)
Query: 2 DLTNFLAQELGKSNPLVNISLSD--VEKIKEQYSCCAED-ELAYQKTEHFCPVEK-HTLP 57
DLT++L + L + S V +KE+ + A D E + VEK + LP
Sbjct: 186 DLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELP 245
Query: 58 DGQVITIGRERYTVGEALFQPSLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGT 117
DGQVITIG ER+ E LFQPSL+G++A GI E +I D + L N V+ GGT
Sbjct: 246 DGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 305
Query: 118 SSMTGFEDRFQKE-SNLSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHI 176
+ G DR KE + L+ S+++ +V PPE YS W+GG+ILA + Q I
Sbjct: 306 TMFPGIADRMSKEITALAPSSMKIKVVAPPE------RKYSVWIGGSILASLSTFQQMWI 359
Query: 177 TKADYDETGPSIVHRKCF 194
KA+YDE+GPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377
>AT2G42170.1 | Symbols: | Actin family protein |
chr2:17578683-17580222 FORWARD LENGTH=329
Length = 329
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 9/173 (5%)
Query: 25 VEKIKEQYSCCAED-ELAYQKTEHFCPVEK-HTLPDGQVITIGRERYTVGEALFQPSLLG 82
V IKEQ+ A D E +K +++ + LPDGQVITIG ER+ E LFQPSL+G
Sbjct: 163 VRDIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIG 222
Query: 83 LDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGFEDRFQKESN-LSSSAVQPT 141
++ GI E+ +I D + L N V+ GGT+ G E+R KE N L+++ ++
Sbjct: 223 METSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIK 282
Query: 142 LVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKADYDETGPSIVHRKCF 194
+V PPE YS W+GG+ILA + + ITKA+Y+E GP+IVH KCF
Sbjct: 283 IVAPPE------RKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>AT5G09810.1 | Symbols: ACT7 | actin 7 | chr5:3052809-3054220
FORWARD LENGTH=377
Length = 377
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 113/198 (57%), Gaps = 11/198 (5%)
Query: 2 DLTNFLAQELGKSNPLVNISLSD--VEKIKEQYSCCAED-ELAYQKTEHFCPVEK-HTLP 57
DLT+ L + L + + + V IKE+ + A D E + + VEK + LP
Sbjct: 186 DLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELP 245
Query: 58 DGQVITIGRERYTVGEALFQPSLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGT 117
DGQVITIG ER+ E LFQPSL+G++A GI E +I D + L N V+ GG+
Sbjct: 246 DGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGS 305
Query: 118 SSMTGFEDRFQKE-SNLSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHI 176
+ G DR KE + L+ S+++ +V PPE YS W+GG+ILA + Q I
Sbjct: 306 TMFPGIADRMSKEITALAPSSMKIKVVAPPE------RKYSVWIGGSILASLSTFQQMWI 359
Query: 177 TKADYDETGPSIVHRKCF 194
+K++YDE+GPSIVHRKCF
Sbjct: 360 SKSEYDESGPSIVHRKCF 377
>AT5G59370.2 | Symbols: ACT4 | actin 4 | chr5:23950109-23951586
FORWARD LENGTH=377
Length = 377
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 101/175 (57%), Gaps = 13/175 (7%)
Query: 25 VEKIKEQYSCCA---EDELAYQKTEHFCPVEK-HTLPDGQVITIGRERYTVGEALFQPSL 80
V +KE+ S A E EL KT VEK LPDGQVITIG ER+ E LFQPS+
Sbjct: 211 VRDMKEKLSYIALDFEQELETSKTS--SSVEKSFELPDGQVITIGAERFRCPEVLFQPSM 268
Query: 81 LGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGFEDRFQKE-SNLSSSAVQ 139
+G++ GI E +I D + L N V+ GGT+ G DR KE + L+ S+++
Sbjct: 269 IGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMK 328
Query: 140 PTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKADYDETGPSIVHRKCF 194
+V PPE YS W+GG+ILA + Q I KA+YDE+GPSIVHRKCF
Sbjct: 329 IKVVAPPE------RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23950109-23951586
FORWARD LENGTH=377
Length = 377
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 101/175 (57%), Gaps = 13/175 (7%)
Query: 25 VEKIKEQYSCCA---EDELAYQKTEHFCPVEK-HTLPDGQVITIGRERYTVGEALFQPSL 80
V +KE+ S A E EL KT VEK LPDGQVITIG ER+ E LFQPS+
Sbjct: 211 VRDMKEKLSYIALDFEQELETSKTS--SSVEKSFELPDGQVITIGAERFRCPEVLFQPSM 268
Query: 81 LGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGFEDRFQKE-SNLSSSAVQ 139
+G++ GI E +I D + L N V+ GGT+ G DR KE + L+ S+++
Sbjct: 269 IGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMK 328
Query: 140 PTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKADYDETGPSIVHRKCF 194
+V PPE YS W+GG+ILA + Q I KA+YDE+GPSIVHRKCF
Sbjct: 329 IKVVAPPE------RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128567-17129981
FORWARD LENGTH=377
Length = 377
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 101/175 (57%), Gaps = 13/175 (7%)
Query: 25 VEKIKEQYSCCA---EDELAYQKTEHFCPVEK-HTLPDGQVITIGRERYTVGEALFQPSL 80
V +KE+ S A E EL KT VEK LPDGQVITIG ER+ E LFQPS+
Sbjct: 211 VRDMKEKLSYIALDYEQELETSKTS--SSVEKSFELPDGQVITIGAERFRCPEVLFQPSM 268
Query: 81 LGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGFEDRFQKE-SNLSSSAVQ 139
+G++ GI E +I D + L N V+ GGT+ G DR KE + L+ S+++
Sbjct: 269 IGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMK 328
Query: 140 PTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKADYDETGPSIVHRKCF 194
+V PPE YS W+GG+ILA + Q I KA+YDE+GPSIVHRKCF
Sbjct: 329 IKVVAPPE------RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>AT3G53750.1 | Symbols: ACT3 | actin 3 | chr3:19915924-19917371
FORWARD LENGTH=377
Length = 377
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 101/175 (57%), Gaps = 13/175 (7%)
Query: 25 VEKIKEQYSCCA---EDELAYQKTEHFCPVEK-HTLPDGQVITIGRERYTVGEALFQPSL 80
V IKE+ A E EL KT VEK + LPDGQVITIG ER+ E L+QPS+
Sbjct: 211 VRDIKEKLCYIALDYEQELETAKTS--SSVEKNYELPDGQVITIGSERFRCPEVLYQPSM 268
Query: 81 LGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGFEDRFQKE-SNLSSSAVQ 139
+G++ GI E +I D + L N V+ GGT+ G DR KE + L+ S+++
Sbjct: 269 IGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMK 328
Query: 140 PTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKADYDETGPSIVHRKCF 194
+V PPE YS W+GG+ILA + Q I KA+YDE+GPSIVHRKCF
Sbjct: 329 IKVVAPPE------RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>AT2G37620.2 | Symbols: ACT1, AAc1 | actin 1 |
chr2:15779761-15781241 FORWARD LENGTH=377
Length = 377
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 101/175 (57%), Gaps = 13/175 (7%)
Query: 25 VEKIKEQYSCCA---EDELAYQKTEHFCPVEK-HTLPDGQVITIGRERYTVGEALFQPSL 80
V IKE+ A E EL KT VEK + LPDGQVITIG ER+ E L+QPS+
Sbjct: 211 VRDIKEKLCYIALDYEQELETAKTS--SSVEKNYELPDGQVITIGSERFRCPEVLYQPSM 268
Query: 81 LGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGFEDRFQKE-SNLSSSAVQ 139
+G++ GI E +I D + L N V+ GGT+ G DR KE + L+ S+++
Sbjct: 269 IGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMK 328
Query: 140 PTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKADYDETGPSIVHRKCF 194
+V PPE YS W+GG+ILA + Q I KA+YDE+GPSIVHRKCF
Sbjct: 329 IKVVAPPE------RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 |
chr2:15779761-15781241 FORWARD LENGTH=377
Length = 377
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 101/175 (57%), Gaps = 13/175 (7%)
Query: 25 VEKIKEQYSCCA---EDELAYQKTEHFCPVEK-HTLPDGQVITIGRERYTVGEALFQPSL 80
V IKE+ A E EL KT VEK + LPDGQVITIG ER+ E L+QPS+
Sbjct: 211 VRDIKEKLCYIALDYEQELETAKTS--SSVEKNYELPDGQVITIGSERFRCPEVLYQPSM 268
Query: 81 LGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGFEDRFQKE-SNLSSSAVQ 139
+G++ GI E +I D + L N V+ GGT+ G DR KE + L+ S+++
Sbjct: 269 IGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMK 328
Query: 140 PTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKADYDETGPSIVHRKCF 194
+V PPE YS W+GG+ILA + Q I KA+YDE+GPSIVHRKCF
Sbjct: 329 IKVVAPPE------RKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>AT2G42100.1 | Symbols: | Actin-like ATPase superfamily protein |
chr2:17560211-17561945 FORWARD LENGTH=378
Length = 378
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 2 DLTNFLAQELGKSNPLVNISLSD--VEKIKEQYSCCAED-ELAYQKTEHFCPVEK-HTLP 57
DLT +L + + + S V IKE+ A D E +K +++ + LP
Sbjct: 187 DLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYELP 246
Query: 58 DGQVITIGRERYTVGEALFQPSLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGT 117
DGQVITIG ER+ E LFQ SL+G++ GI E +I D + L N V+ GGT
Sbjct: 247 DGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGT 306
Query: 118 SSMTGFEDRFQKESN-LSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHI 176
+ G DR KE N L+ +++ +V PPE YS WVGG+ILA + I
Sbjct: 307 TMFPGIADRMNKEINALAPPSMKIKVVAPPE------RKYSVWVGGSILASLSSFAPMWI 360
Query: 177 TKADYDETGPSIVHRKCF 194
TKA+YDE G +IVHRKCF
Sbjct: 361 TKAEYDEQGGAIVHRKCF 378
>AT2G42090.1 | Symbols: ACT9 | actin 9 | chr2:17556744-17558369
FORWARD LENGTH=366
Length = 366
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 2 DLTNFLAQELGKSNPLVNISLSD--VEKIKEQYSCCAED-ELAYQKTEHFCPVEK-HTLP 57
DLT++L + + + S V IKE+ A D E +KT ++K + LP
Sbjct: 175 DLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLP 234
Query: 58 DGQVITIGRERYTVGEALFQPSLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGT 117
DGQ ITI ER+ E LFQPS++G ++ GI E +I D R + N ++ GGT
Sbjct: 235 DGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGT 294
Query: 118 SSMTGFEDRFQKESN-LSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHI 176
+ + G ++R KE N L S+++ +V PPE + S W+GG+ILA + I
Sbjct: 295 TMLHGIKERMTKELNALVPSSMKVKVVVPPE------SECSVWIGGSILASLSTFHQMWI 348
Query: 177 TKADYDETGPSIVHRKC 193
TK +Y+E G +IVHRKC
Sbjct: 349 TKDEYEEHGAAIVHRKC 365
>AT3G18780.1 | Symbols: ACT2, DER1, LSR2, ENL2 | actin 2 |
chr3:6475535-6476728 FORWARD LENGTH=371
Length = 371
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 15/174 (8%)
Query: 2 DLTNFLAQELGKSNPLVNISLSD--VEKIKEQYSCCA---EDELAYQKTEHFCPVEK-HT 55
DLT++L + L + + + V IKE+ S A E E+ KT +EK +
Sbjct: 186 DLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTS--SSIEKNYE 243
Query: 56 LPDGQVITIGRERYTVGEALFQPSLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCG 115
LPDGQVITIG ER+ E LFQPS +G++A GI E +I D + L N V+ G
Sbjct: 244 LPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSG 303
Query: 116 GTSSMTGFEDRFQKE-SNLSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKV 168
GT+ +G DR KE + L+ S+++ +V PPE YS W+GG+ILA +
Sbjct: 304 GTTMFSGIADRMSKEITALAPSSMKIKVVAPPE------RKYSVWIGGSILASL 351
>AT1G18450.1 | Symbols: ATARP4, ARP4 | actin-related protein 4 |
chr1:6348199-6351766 FORWARD LENGTH=441
Length = 441
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 34 CCAEDELAYQKTEHFCPVEKHTLPDGQVITIGRERYTVGEALFQPSLL----GLDAH--- 86
C D K+ P + LPDGQ + IG +R+ V + +F PS++ G++ +
Sbjct: 271 CRVPDTPYDDKSYSNIPTTSYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEM 330
Query: 87 -----GIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMTGFEDRFQKESNLSSSAVQPT 141
G+ ++ +I+ D R+L + ++ GGTSSM ++R +K +L +
Sbjct: 331 IPSVRGLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEK--DLIEESPHSA 388
Query: 142 LVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHITKADYDETGPSIVHRKC 193
VK +S W+GG+ILA + Q +K++Y+E G S + RKC
Sbjct: 389 RVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | actin related protein 2
| chr3:9952787-9955784 REVERSE LENGTH=389
Length = 389
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 3 LTNFLAQELGKSNPLVN--ISLSDVEKIKEQ-----YSCCAEDELAYQKTEHFCPVEKHT 55
+T +L L + +N V +IKE+ Y E +L + T V+ +T
Sbjct: 186 ITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETT---ILVKNYT 242
Query: 56 LPDGQVITIGRERYTVGEALFQPSLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCG 115
LPDG+VI +G ER+ EALF P L+ ++ G+ + + R I + DN L ++ V+ G
Sbjct: 243 LPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSG 302
Query: 116 GTSSMTGFEDRFQKE------------SNLSSSAVQPTLVKPPEYMPENLTMYSAWVGGA 163
G++ G R +KE + ++ + PP + ++GGA
Sbjct: 303 GSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPR------RKHMVYLGGA 356
Query: 164 ILAKVVFPQNQH-ITKADYDETGPSIVHR 191
+LA ++ + I + DY E G + +++
Sbjct: 357 VLAGIMKDAPEFWINREDYMEEGINCLNK 385
>AT3G33520.1 | Symbols: ATARP6, ARP6, SUF3, ESD1 | actin-related
protein 6 | chr3:14093791-14095476 REVERSE LENGTH=421
Length = 421
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 15/138 (10%)
Query: 62 ITIGRERYTVGEALFQPSLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGTSSMT 121
I + ER+ V E LFQP+ LG++ G+ E +VR I++ S L ++ ++ GG++
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 122 GFEDRFQKESNLSSSAVQPTLVKPPEYMPENLT-----MYSAWVGGAILAKVVFPQNQHI 176
++R + E ++P + P++ +T + W GG++LA ++ +
Sbjct: 353 QLKERLEGE-------LRPLV---PDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCV 402
Query: 177 TKADYDETGPSIVHRKCF 194
TKA+Y+E G + R+ F
Sbjct: 403 TKAEYEELGSARCRRRFF 420
>AT5G56180.1 | Symbols: ATARP8, ARP8 | actin-related protein 8 |
chr5:22737539-22740986 REVERSE LENGTH=471
Length = 471
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 15/187 (8%)
Query: 1 MDLTNFLAQELGKSNPLVNISLSDVEKIKEQYSCCAEDELAYQKTEHFCPVEKHTLPDGQ 60
+ LT FL +++ ++N + SL V +KE+ A D A + VE +
Sbjct: 286 LKLTGFLKEKMQENN-ISFQSLYTVRTLKEKLCYVALDYKAELSKDTQASVE---VSGEG 341
Query: 61 VITIGRERYTVGEALFQPSLLGLDA---HGIVEQLVRTISTVSSDNHRQLLENTVVCGGT 117
T+ +ER+ GE LFQP L G+ A H V + + V+ GG+
Sbjct: 342 WFTLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGS 401
Query: 118 SSMTGFEDRFQKE--SNLSSSAVQPTLVKPPEYMPENLTMYSAWVGGAILAKV-VFPQNQ 174
+ + G +R ++E +L SS V PP Y + ++W G +++ + +FP
Sbjct: 402 ACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVD-----TSWHGAKLISNLSIFPGPW 456
Query: 175 HITKADY 181
IT+ +
Sbjct: 457 CITRKQF 463