Miyakogusa Predicted Gene

Lj3g3v3700150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3700150.1 Non Chatacterized Hit- tr|I1LNV9|I1LNV9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8818
PE=,58.27,0,seg,NULL; coiled-coil,NULL,CUFF.46356.1
         (490 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G47940.1 | Symbols:  | unknown protein; Has 1807 Blast hits t...   226   2e-59

>AT5G47940.1 | Symbols:  | unknown protein; Has 1807 Blast hits to
           1807 proteins in 277 species: Archae - 0; Bacteria - 0;
           Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
           Other Eukaryotes - 339 (source: NCBI BLink). |
           chr5:19409407-19411893 REVERSE LENGTH=749
          Length = 749

 Score =  226 bits (577), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 165/448 (36%), Positives = 229/448 (51%), Gaps = 91/448 (20%)

Query: 3   MTTTTMETNWSSESNWTIASGTIPNCLTIQSSLSFTDDEQPTIESTXXXXXXXXXXXXX- 61
           M  +  + +++S +NW +  GT+ + ++ +SS +   +    I S               
Sbjct: 1   MGASNHDNDFNSTTNWKLVDGTLIDAISFESSFTANPESDDGIISAAVDHVTKSPLLLLP 60

Query: 62  -------CEIKINFAGKHELRQVYIRSTARVYEIYCAPDLKTTGEYLCTVRCGVAVRDGD 114
                  CEI I FA +HELRQ+YIRS+ARVYE+Y     +   EYLCTVRCGVA+RD +
Sbjct: 61  PVPNGEPCEITITFAQEHELRQIYIRSSARVYEVYYTKKRRHDKEYLCTVRCGVAIRDEE 120

Query: 115 VLRCNLIESL---PNRD----------SSVKCEDDWVEVKVADTS--DHATQDLYEATAE 159
           VL+  L ES    P +D          +    EDDWVEVK +D S  ++  QD YEATAE
Sbjct: 121 VLQIPLTESADSKPVKDLIERKVADNGNGRTSEDDWVEVKASDDSLLNNEKQDFYEATAE 180

Query: 160 IDDVDPCVSVTIRLLSLQSKGCVNVHEIYVFADPVD---SETQE-TRNENSSSSSLMAMF 215
           I+D +PC S+T+RLLSLQ K C  V E+YVFADPVD   SE +E T   NSSSSSLMAMF
Sbjct: 181 INDAEPCTSITVRLLSLQDKRCALVDEVYVFADPVDPSESEKEEATGTGNSSSSSLMAMF 240

Query: 216 LPTLMQLSKAKTGLGDLNAVRKEKQHVSEDGLEENPCPSDSVIKTQLKGKASMSDPQEVK 275
           +P L+QLS+ K        VRKE+                     Q+  K++ +DP  + 
Sbjct: 241 MPALLQLSRGKD-------VRKERD-------------------IQVSDKSNSTDPVAIG 274

Query: 276 LKEVIEGSSQPDIHTQVANMESGHAAVPLHAAKVDSSCSAVHSKIAEVVNNHSASTVPSQ 335
             + I G S P +   VA          + AA   +  S   SK A   NN         
Sbjct: 275 NTDQI-GVSSPVLVDTVAKQ--------VDAA---TRVSGAESKPAIPCNN--------- 313

Query: 336 VAVTESNQGGFSGGGVERVLEQLVSRMDRLEQICLGFQEKMVMPMNSIETRLQRVEQQLD 395
                          VE +L QLV+++  +E I + F+++M+ P+NSI+ RLQ VE++L+
Sbjct: 314 ---------------VETILNQLVNKVSMIETILIRFEDQMLKPINSIDARLQLVEKKLE 358

Query: 396 TLTQKLQSSASPSCYRISAPDASSTESD 423
            L +K  S  S   +R   P+  S  SD
Sbjct: 359 QLGKK--SFESDLGFRTKIPNQDSLRSD 384