Miyakogusa Predicted Gene

Lj3g3v3690100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3690100.1 Non Chatacterized Hit- tr|I3SNH2|I3SNH2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.25,0,FMN-linked oxidoreductases,NULL; seg,NULL; no
description,Aldolase-type TIM barrel; Dus,tRNA-dihydro,CUFF.46215.1
         (400 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63510.1 | Symbols:  | FMN-linked oxidoreductases superfamily...   573   e-163
AT5G47970.2 | Symbols:  | Aldolase-type TIM barrel family protei...   561   e-160
AT5G47970.1 | Symbols:  | Aldolase-type TIM barrel family protei...   561   e-160
AT3G63510.2 | Symbols:  | FMN-linked oxidoreductases superfamily...   545   e-155
AT5G67220.1 | Symbols:  | FMN-linked oxidoreductases superfamily...    58   1e-08

>AT3G63510.1 | Symbols:  | FMN-linked oxidoreductases superfamily
           protein | chr3:23450542-23452682 FORWARD LENGTH=419
          Length = 419

 Score =  573 bits (1476), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 268/338 (79%), Positives = 301/338 (89%), Gaps = 1/338 (0%)

Query: 56  YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
           YLPP FSVAPMM+WTD+HYRTLARLI+KHAWLYTEM+AAET+V+QQ NLDRFLAFSP QH
Sbjct: 49  YLPPSFSVAPMMDWTDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQH 108

Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
           PIVLQ+GGSNVE LAKA +L++AYGYDEINLNCGCPSPKVAGHGCFGVSLML PK V EA
Sbjct: 109 PIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEA 168

Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
           MSAIAANTNVPV+VKCRIGVD+HDSYDELCDFI+KVS+LSPT+HFI+HSRKALL GISPA
Sbjct: 169 MSAIAANTNVPVTVKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSRKALLGGISPA 228

Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
           +NR IPPLKYEY+Y L+RDFPDL FTINGGITSV +V AA + GA+GVMVGRAAYNNPW 
Sbjct: 229 DNRRIPPLKYEYYYALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQ 288

Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
            LG VDT +YG PS  LTRRQVLE+Y VYGDSVLG +G+ RP VRD+VKPLLNLFHS  G
Sbjct: 289 TLGQVDTAVYGVPSSGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKPLLNLFHSENG 348

Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPV 392
           N LWKR+ADAAF+ C ++ S  EE+L AIPD VLDSP+
Sbjct: 349 NSLWKRRADAAFKECRSVGSLLEESLRAIPDCVLDSPI 386


>AT5G47970.2 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr5:19423420-19425585 FORWARD LENGTH=387
          Length = 387

 Score =  561 bits (1447), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 265/346 (76%), Positives = 295/346 (85%), Gaps = 1/346 (0%)

Query: 56  YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
           Y PP FS+APMM WTD+HYRTLARLI+KHAWLYTEMLAAETIVYQ+DNLD FLAFSPDQH
Sbjct: 7   YSPPLFSIAPMMGWTDNHYRTLARLITKHAWLYTEMLAAETIVYQEDNLDSFLAFSPDQH 66

Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
           PIVLQIGG N+E LAKAT LANAY YDEIN NCGCPSPKV+G GCFG  LMLDPKFV EA
Sbjct: 67  PIVLQIGGRNLENLAKATRLANAYAYDEINFNCGCPSPKVSGRGCFGALLMLDPKFVGEA 126

Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
           MS IAANTN  V+VKCRIGVDDHDSY+ELCDFI  VSSLSPTKHFIIHSRKALL+G+SP+
Sbjct: 127 MSVIAANTNAAVTVKCRIGVDDHDSYNELCDFIHIVSSLSPTKHFIIHSRKALLSGLSPS 186

Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
           +NR IPPLKYE+F+ LLRDFPDL FTINGGI SV E  AA  +GA+GVM+GRA Y NPWH
Sbjct: 187 DNRRIPPLKYEFFFALLRDFPDLKFTINGGINSVVEADAALRSGAHGVMLGRAVYYNPWH 246

Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
           ILGHVDTV+YG+PS  +TRRQVLEKY +YG+SVLGKYG  RP +RDIV+PL+NLFHS  G
Sbjct: 247 ILGHVDTVVYGSPSSGITRRQVLEKYKLYGESVLGKYGKGRPNLRDIVRPLINLFHSESG 306

Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRR 400
           NG WKR+ DAA  HCTT++SF +E L AIPD VLDS  V+   GR 
Sbjct: 307 NGQWKRRTDAALLHCTTLQSFLDEVLPAIPDYVLDSSAVKEATGRE 352


>AT5G47970.1 | Symbols:  | Aldolase-type TIM barrel family protein |
           chr5:19423420-19425585 FORWARD LENGTH=387
          Length = 387

 Score =  561 bits (1447), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 265/346 (76%), Positives = 295/346 (85%), Gaps = 1/346 (0%)

Query: 56  YLPPWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQH 115
           Y PP FS+APMM WTD+HYRTLARLI+KHAWLYTEMLAAETIVYQ+DNLD FLAFSPDQH
Sbjct: 7   YSPPLFSIAPMMGWTDNHYRTLARLITKHAWLYTEMLAAETIVYQEDNLDSFLAFSPDQH 66

Query: 116 PIVLQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEA 175
           PIVLQIGG N+E LAKAT LANAY YDEIN NCGCPSPKV+G GCFG  LMLDPKFV EA
Sbjct: 67  PIVLQIGGRNLENLAKATRLANAYAYDEINFNCGCPSPKVSGRGCFGALLMLDPKFVGEA 126

Query: 176 MSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPA 235
           MS IAANTN  V+VKCRIGVDDHDSY+ELCDFI  VSSLSPTKHFIIHSRKALL+G+SP+
Sbjct: 127 MSVIAANTNAAVTVKCRIGVDDHDSYNELCDFIHIVSSLSPTKHFIIHSRKALLSGLSPS 186

Query: 236 ENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWH 295
           +NR IPPLKYE+F+ LLRDFPDL FTINGGI SV E  AA  +GA+GVM+GRA Y NPWH
Sbjct: 187 DNRRIPPLKYEFFFALLRDFPDLKFTINGGINSVVEADAALRSGAHGVMLGRAVYYNPWH 246

Query: 296 ILGHVDTVIYGAPSCSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPG 354
           ILGHVDTV+YG+PS  +TRRQVLEKY +YG+SVLGKYG  RP +RDIV+PL+NLFHS  G
Sbjct: 247 ILGHVDTVVYGSPSSGITRRQVLEKYKLYGESVLGKYGKGRPNLRDIVRPLINLFHSESG 306

Query: 355 NGLWKRKADAAFRHCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRR 400
           NG WKR+ DAA  HCTT++SF +E L AIPD VLDS  V+   GR 
Sbjct: 307 NGQWKRRTDAALLHCTTLQSFLDEVLPAIPDYVLDSSAVKEATGRE 352


>AT3G63510.2 | Symbols:  | FMN-linked oxidoreductases superfamily
           protein | chr3:23450615-23452682 FORWARD LENGTH=386
          Length = 386

 Score =  545 bits (1403), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 255/324 (78%), Positives = 288/324 (88%), Gaps = 1/324 (0%)

Query: 70  TDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSNVEKL 129
           +D+HYRTLARLI+KHAWLYTEM+AAET+V+QQ NLDRFLAFSP QHPIVLQ+GGSNVE L
Sbjct: 30  SDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQHPIVLQLGGSNVENL 89

Query: 130 AKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAIAANTNVPVSV 189
           AKA +L++AYGYDEINLNCGCPSPKVAGHGCFGVSLML PK V EAMSAIAANTNVPV+V
Sbjct: 90  AKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEAMSAIAANTNVPVTV 149

Query: 190 KCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFY 249
           KCRIGVD+HDSYDELCDFI+KVS+LSPT+HFI+HSRKALL GISPA+NR IPPLKYEY+Y
Sbjct: 150 KCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYY 209

Query: 250 GLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVMVGRAAYNNPWHILGHVDTVIYGAPS 309
            L+RDFPDL FTINGGITSV +V AA + GA+GVMVGRAAYNNPW  LG VDT +YG PS
Sbjct: 210 ALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQTLGQVDTAVYGVPS 269

Query: 310 CSLTRRQVLEKYIVYGDSVLGKYGH-RPTVRDIVKPLLNLFHSAPGNGLWKRKADAAFRH 368
             LTRRQVLE+Y VYGDSVLG +G+ RP VRD+VKPLLNLFHS  GN LWKR+ADAAF+ 
Sbjct: 270 SGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKPLLNLFHSENGNSLWKRRADAAFKE 329

Query: 369 CTTIKSFFEETLVAIPDSVLDSPV 392
           C ++ S  EE+L AIPD VLDSP+
Sbjct: 330 CRSVGSLLEESLRAIPDCVLDSPI 353


>AT5G67220.1 | Symbols:  | FMN-linked oxidoreductases superfamily
           protein | chr5:26820276-26821926 REVERSE LENGTH=423
          Length = 423

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)

Query: 59  PWFSVAPMMEWTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIV 118
           P + VAPM++ ++  +R L +     A  YT ML +      +   ++      +  P+ 
Sbjct: 88  PKYIVAPMVDNSELPFRLLCQKYGAQA-AYTPMLHSRIFTETEKYRNQEFTTCKEDRPLF 146

Query: 119 LQIGGSNVEKLAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSA 178
           +Q   ++ + L +A +    Y  D +++N GCP  ++A  G +G  LM +   V   +  
Sbjct: 147 VQFCANDPDTLLEAAKRVEPY-CDYVDINLGCPQ-RIARRGNYGAFLMDNLPLVKSLVEK 204

Query: 179 IAANTNVPVSVKCRI 193
           +A N NVPVS K RI
Sbjct: 205 LAQNLNVPVSCKIRI 219