Miyakogusa Predicted Gene
- Lj3g3v3678810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3678810.1 Non Chatacterized Hit- tr|A5C1S9|A5C1S9_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,24.92,6e-17,no
description,Tetratricopeptide-like helical; seg,NULL; PPR:
pentatricopeptide repeat domain,Pentat,CUFF.46180.1
(579 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 680 0.0
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 463 e-130
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 438 e-123
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 433 e-121
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 429 e-120
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 423 e-118
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 423 e-118
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 422 e-118
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 412 e-115
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 406 e-113
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 405 e-113
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 399 e-111
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 399 e-111
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 398 e-111
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 395 e-110
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 393 e-109
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 385 e-107
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 385 e-107
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 385 e-107
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-104
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-104
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-103
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 369 e-102
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 369 e-102
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 369 e-102
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 369 e-102
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 369 e-102
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 368 e-102
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-101
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 364 e-101
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 1e-99
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 1e-99
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 5e-99
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 7e-99
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 1e-98
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 1e-98
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 2e-98
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 2e-98
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 2e-98
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 355 6e-98
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 3e-96
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 4e-95
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 2e-94
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 342 3e-94
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 342 4e-94
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 9e-92
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 7e-91
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 1e-90
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 323 2e-88
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 2e-86
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 2e-83
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 302 4e-82
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 9e-82
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 297 1e-80
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 295 7e-80
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 290 2e-78
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 277 2e-74
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 8e-74
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 268 1e-71
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 6e-71
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 263 2e-70
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 6e-69
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 8e-69
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 258 9e-69
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 253 3e-67
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 252 5e-67
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 7e-67
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 4e-66
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 248 6e-66
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 6e-66
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 6e-63
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 236 3e-62
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 2e-61
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 8e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 231 1e-60
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 4e-60
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 2e-59
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 5e-59
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 5e-59
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 223 2e-58
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 3e-57
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 3e-57
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 7e-56
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 8e-56
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 8e-55
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 2e-53
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 9e-53
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 204 1e-52
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 6e-51
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 7e-51
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 197 1e-50
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 5e-50
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 7e-50
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 8e-50
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 7e-49
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 7e-48
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 9e-48
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 9e-48
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 1e-43
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 5e-43
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 7e-43
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 4e-40
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 3e-36
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 2e-30
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 4e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 92 8e-19
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 92 1e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 92 1e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 91 3e-18
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 90 4e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 88 2e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 87 3e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 8e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 83 6e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 80 4e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 1e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 1e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 77 3e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 4e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 8e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 74 3e-13
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 67 2e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 67 3e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 67 3e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 60 3e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 60 4e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 8e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 1e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 5e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 54 3e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 6e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 51 2e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 49 7e-06
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/576 (58%), Positives = 419/576 (72%), Gaps = 17/576 (2%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
+C S IKQLQ+H +T G F R++LLE CAISP DLSFA QIFR I P TNDW
Sbjct: 12 KCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDW 71
Query: 75 NAVLRGLAMSPQPTQAISWYRSV------SRSPQKVDALTCSFALKGCARALTFSEATQI 128
NA++RG A S P+ A SWYRS+ S + +VDALTCSF LK CARAL S Q+
Sbjct: 72 NAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQL 131
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRP 188
H Q+ R G A Y+K GDL +A K+FDEMP RD+ASWNA+I+GL G+R
Sbjct: 132 HCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRA 191
Query: 189 NEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE-IVHGYIVDEKLDMNVIVCNA 247
+EA+ L+KRM+ EG R ++VTV+ AL ACS LG +K+GE I HGY D NVIV NA
Sbjct: 192 SEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVIVSNA 246
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
IDMYSKCGFVDKAY VF+ + KS++TWNTMI FA++G+ ++AL++ D++ +G+ P
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 308 DAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTI 367
D VSYLAAL AC HAGLVE G+ +F+ M V+ NMKHYG VVDLL RAGR++EA+D I
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDII 366
Query: 368 NSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWH 427
SM M+PD VLWQSLLGAS+ Y +VEMAE+ASR++ EMG N+ GDFVLLSNVYAA+ RW
Sbjct: 367 CSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWK 426
Query: 428 DVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYG 487
DV RVR+ M +K V+K+PG SY E IH+F N D+SH W+EIY K+DEI+F+I+ G
Sbjct: 427 DVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDG 486
Query: 488 YTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNG----TPIQVIKNLRICGDCH 543
Y A+T LVLHDIGEE+K+NAL YHSEKLAVAYGL+ ++G +P++VI NLRICGDCH
Sbjct: 487 YVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLM-MMDGADEESPVRVINNLRICGDCH 545
Query: 544 TVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
V K IS IY REIIVRDR RF RFK G CSC D+W
Sbjct: 546 VVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 218/540 (40%), Positives = 350/540 (64%), Gaps = 5/540 (0%)
Query: 44 LLELCAISPAADLSFAAQIFRRIQNP-STNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQ 102
+ L ++ +S+A ++F +I+ P + WN ++RG A A S YR + S
Sbjct: 57 IFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGL 116
Query: 103 -KVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQ 161
+ D T F +K IHS V+R GF + YA GD+ +A
Sbjct: 117 VEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY 176
Query: 162 KVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG 221
KVFD+MP++D+ +WN++I+G A+ +P EA+AL+ M +G +P+ T++ LSAC+++G
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIG 236
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
AL G+ VH Y++ L N+ N ++D+Y++CG V++A ++F M K+ ++W ++I
Sbjct: 237 ALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
Query: 282 MAFAMNGDGYKALDLLDQM-ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV- 339
+ A+NG G +A++L M + +G+ P ++++ L AC+H G+V+EG F M+
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYK 355
Query: 340 VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMAS 399
++P ++H+G +VDLL RAG++K+AY+ I SMPM P+VV+W++LLGA +G+ ++AE A
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 400 RKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKF 459
+++++ N GD+VLLSN+YA+ QRW DV+++R+ M+ V+KVPG S E+ ++H+F
Sbjct: 416 IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEF 475
Query: 460 INGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAY 519
+ GD+SHP IYAK+ E+ R+++ GY + V D+ EE+K+NA+ YHSEK+A+A+
Sbjct: 476 LMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAF 535
Query: 520 GLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
LIST +PI V+KNLR+C DCH IK++S +YNREI+VRDR+RF FK G CSC DYW
Sbjct: 536 MLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 198/454 (43%), Positives = 315/454 (69%), Gaps = 3/454 (0%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
IHS V+R GF + YA GD+ +A KVFD+MP++D+ +WN++I+G A+ +
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNA 247
P EA+AL+ M +G +P+ T++ LSAC+++GAL G+ VH Y++ L N+ N
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM-ALDGVH 306
++D+Y++CG V++A ++F M K+ ++W ++I+ A+NG G +A++L M + +G+
Sbjct: 130 LLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 188
Query: 307 PDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYD 365
P ++++ L AC+H G+V+EG F M+ ++P ++H+G +VDLL RAG++K+AY+
Sbjct: 189 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 248
Query: 366 TINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQR 425
I SMPM P+VV+W++LLGA +G+ ++AE A +++++ N GD+VLLSN+YA+ QR
Sbjct: 249 YIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQR 308
Query: 426 WHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKA 485
W DV+++R+ M+ V+KVPG S E+ ++H+F+ GD+SHP IYAK+ E+ R+++
Sbjct: 309 WSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRS 368
Query: 486 YGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTV 545
GY + V D+ EE+K+NA+ YHSEK+A+A+ LIST +PI V+KNLR+C DCH
Sbjct: 369 EGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLA 428
Query: 546 IKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
IK++S +YNREI+VRDR+RF FK G CSC DYW
Sbjct: 429 IKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 121/238 (50%), Gaps = 2/238 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
D++ A ++F ++ WN+V+ G A + +P +A++ Y ++ K D T L
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 96
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
CA+ + ++H +++ G YA+ G ++ A+ +FDEM ++
Sbjct: 97 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 156
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKE-EGWRPNDVTVLGALSACSQLGALKQG-EIVHG 231
SW ++I GLA EAI LFK M+ EG P ++T +G L ACS G +K+G E
Sbjct: 157 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 216
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
+ K++ + ++D+ ++ G V KAY ++M +++ W T++ A ++GD
Sbjct: 217 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 274
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 220 LGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNT 279
+ ++ GE +H ++ + V N+++ +Y+ CG V AY VF M K L+ WN+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP-EKDLVAWNS 59
Query: 280 MIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV 339
+I FA NG +AL L +M G+ PD + ++ L AC G + G R+ M
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 340 VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+ N+ ++DL R GR++EA + M + + V W SL+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/592 (38%), Positives = 339/592 (57%), Gaps = 35/592 (5%)
Query: 22 IKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGL 81
++Q+ A L G ++ A+S L +A QI R + P+ N+++R
Sbjct: 22 VRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAH 81
Query: 82 AMSPQPTQAISWYRSV--SRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDA 139
SP P ++ +YR + S + K D T +F ++ C Q+H +R GFD
Sbjct: 82 CKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDN 141
Query: 140 XXXXXXXXXXXYAKTGDLDA-------------------------------AQKVFDEMP 168
YA+ G LD+ A+K+F+ MP
Sbjct: 142 DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP 201
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
+RD +WNAMISG AQ EA+ +F M+ EG + N V ++ LSAC+QLGAL QG
Sbjct: 202 ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRW 261
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG 288
H YI K+ + V + ++D+Y+KCG ++KA VF M K++ TW++ + AMNG
Sbjct: 262 AHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSALNGLAMNG 320
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHY 347
G K L+L M DGV P+AV++++ L C+ G V+EG R FD M+ ++P ++HY
Sbjct: 321 FGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHY 380
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS 407
G +VDL RAGR+++A I MPM P +W SLL AS+ Y N+E+ +AS+K++E+ +
Sbjct: 381 GCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELET 440
Query: 408 NSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHP 467
+ G +VLLSN+YA W +V VR++M +K VRK PG S E++ ++H+F GD+SHP
Sbjct: 441 ANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHP 500
Query: 468 NWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNG 527
+ +I A +I R++ GY A T V+ DI EE+K++AL HSEK A+A+G++S
Sbjct: 501 KYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKED 560
Query: 528 TPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
PI+++KNLR+CGDCH V +IS I+NREIIVRDR RF FK G CSC +W
Sbjct: 561 VPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 35/299 (11%)
Query: 119 ALTFSEATQIHSQVLRFGF--DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWN 176
+TF E QIH+++ G D + LD A ++ D K + + N
Sbjct: 16 GITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALN 75
Query: 177 AMISGLAQGSRPNEAIALFKRMKEEG--WRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
+MI + P ++ ++R+ G +P++ TV + AC+ L + G VHG +
Sbjct: 76 SMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTI 135
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC------------------------ 270
D + V +I +Y++ G +D + VF ++ C
Sbjct: 136 RRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARK 195
Query: 271 ------TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGL 324
+ I WN MI +A G+ +AL++ M L+GV + V+ ++ L AC G
Sbjct: 196 LFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGA 255
Query: 325 VEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+++G ++ + +K ++ ++VDL + G +++A + M +V W S L
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE-KNVYTWSSAL 313
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/574 (38%), Positives = 344/574 (59%), Gaps = 17/574 (2%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPS-RTKLLELCAISPAADLSFAAQIFRRI-QNPSTND 73
C+S+ ++++ +H+I G H HPS LL CA+S LS A +F +PST+D
Sbjct: 15 CNSMKKLRKIHSHVIINGLQH-HPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSD 73
Query: 74 WNAVLRGLAMSPQPTQAISWY-RSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQV 132
WN ++RG + S P +I +Y R + S + D T +FALK C R + + +IH V
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 133 LRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAI 192
+R GF Y+ G ++ A KVFDEMP RD+ SWN MI + N+A+
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 193 ALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMY 252
+++KRM EG + T++ LS+C+ + AL G ++H D + + V V NA+IDMY
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMY 253
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
+KCG ++ A VF M + ++TWN+MI+ + ++G G +A+ +M GV P+A+++
Sbjct: 254 AKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITF 312
Query: 313 LAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP 371
L L C+H GLV+EGV F++M + PN+KHYG +VDL GRAG+++ + + I +
Sbjct: 313 LGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASS 372
Query: 372 MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKR 431
D VLW++LLG+ K + N+E+ E+A +KLV++ + + GD+VL++++Y+A
Sbjct: 373 CHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFAS 432
Query: 432 VREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGY--- 488
+R+ + + D++ VPG+S+ EI ++HKF+ D+ HP IY+++ E+ R GY
Sbjct: 433 MRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPE 492
Query: 489 -TAKTDLVLHD--IGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTV 545
+ +T L D +G D HSEKLA+AYGL+ T GT +++ KNLR+C DCH+
Sbjct: 493 DSNRTAPTLSDRCLGSADTS-----HSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSF 547
Query: 546 IKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
K +S +NREIIVRDR RF F G+CSC DYW
Sbjct: 548 TKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/569 (37%), Positives = 351/569 (61%), Gaps = 5/569 (0%)
Query: 15 RCHSLIHIKQLQAHLI-TTGKFHFHPSRTKLLELCAISPAAD-LSFAAQIFRRIQNPSTN 72
RCH++ KQ+ A I + + S + +L CA S + +++AA IFR I +P T
Sbjct: 39 RCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTF 98
Query: 73 DWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQV 132
D+N ++RG +A+ +Y + + + D T LK C R + E QIH QV
Sbjct: 99 DFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQV 158
Query: 133 LRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAI 192
+ G +A Y + G+++ + VF+++ + ASW++M+S A +E +
Sbjct: 159 FKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECL 218
Query: 193 ALFKRM-KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDM 251
LF+ M E + + ++ AL AC+ GAL G +HG+++ ++N+IV +++DM
Sbjct: 219 LLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDM 278
Query: 252 YSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVS 311
Y KCG +DKA +FQ M ++ +T++ MI A++G+G AL + +M +G+ PD V
Sbjct: 279 YVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVV 337
Query: 312 YLAALCACNHAGLVEEGVRLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
Y++ L AC+H+GLV+EG R+F +++K V+P +HYG +VDLLGRAG ++EA +TI S+
Sbjct: 338 YVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSI 397
Query: 371 PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVK 430
P+ + V+W++ L + N+E+ ++A+++L+++ S++ GD++L+SN+Y+ Q W DV
Sbjct: 398 PIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVA 457
Query: 431 RVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTA 490
R R + K +++ PGFS E+ K H+F++ D+SHP KEIY + ++++++K GY+
Sbjct: 458 RTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSP 517
Query: 491 KTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIIS 550
+L ++ EE+K L HS+K+A+A+GL+ T G+ I++ +NLR+C DCHT K IS
Sbjct: 518 DLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKIS 577
Query: 551 NIYNREIIVRDRARFGRFKGGVCSCGDYW 579
IY REI+VRDR RF FKGG CSC DYW
Sbjct: 578 MIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/573 (38%), Positives = 333/573 (58%), Gaps = 19/573 (3%)
Query: 20 IHIKQLQAHLITTG------KFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTND 73
+H++Q+ A L+ T FH SR L ++ P D++++ ++F + NP+ +
Sbjct: 25 LHLRQIHALLLRTSLIRNSDVFHHFLSRLAL----SLIPR-DINYSCRVFSQRLNPTLSH 79
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSR-SPQKVDALTCSFALKGCARALTFSEATQIHSQV 132
N ++R ++S P + +RS+ R S + L+ SFALK C ++ QIH ++
Sbjct: 80 CNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKI 139
Query: 133 LRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAI 192
GF + Y+ + A KVFDE+PKRD SWN + S + R + +
Sbjct: 140 FSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVL 199
Query: 193 ALFKRMKEE---GWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
LF +MK + +P+ VT L AL AC+ LGAL G+ VH +I + L + + N ++
Sbjct: 200 VLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLV 259
Query: 250 DMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDA 309
MYS+CG +DKAY VF M +++++W +I AMNG G +A++ ++M G+ P+
Sbjct: 260 SMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEE 318
Query: 310 VSYLAALCACNHAGLVEEGVRLFDLMKGSV--VKPNMKHYGSVVDLLGRAGRIKEAYDTI 367
+ L AC+H+GLV EG+ FD M+ +KPN+ HYG VVDLLGRA + +AY I
Sbjct: 319 QTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLI 378
Query: 368 NSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWH 427
SM M PD +W++LLGA + +G+VE+ E L+E+ + GD+VLL N Y+ +W
Sbjct: 379 KSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWE 438
Query: 428 DVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYG 487
V +R M K + PG S E+ +H+FI D SHP +EIY + EI ++K G
Sbjct: 439 KVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAG 498
Query: 488 YTAKTDLVLHDI-GEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVI 546
Y A+ LH++ EE+K AL YHSEKLA+A+G++ T GT I+V KNLR C DCH
Sbjct: 499 YVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFA 558
Query: 547 KIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
K +S++Y+R +IVRDR+RF FKGG CSC D+W
Sbjct: 559 KFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/552 (40%), Positives = 324/552 (58%), Gaps = 39/552 (7%)
Query: 62 IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT 121
+F + +P + A + +++ QA Y + S + T S LK C+
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST--- 142
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----------- 170
IH+ VL+FG YAK GD+ +AQKVFD MP+R
Sbjct: 143 -KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 171 --------------------DIASWNAMISGLAQGSRPNEAIALFKRMKEEGW-RPNDVT 209
DI SWN MI G AQ PN+A+ LF+++ EG +P+++T
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
V+ ALSACSQ+GAL+ G +H ++ ++ +NV VC +IDMYSKCG +++A VF N +
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVF-NDT 320
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQM-ALDGVHPDAVSYLAALCACNHAGLVEEG 328
K ++ WN MI +AM+G AL L ++M + G+ P ++++ L AC HAGLV EG
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 329 VRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASK 387
+R+F+ M +KP ++HYG +V LLGRAG++K AY+TI +M M D VLW S+LG+ K
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 388 TYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGF 447
+G+ + + + L+ + + G +VLLSN+YA+ + V +VR M K + K PG
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 448 SYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNA 507
S EI+ K+H+F GD+ H KEIY + +I RIK++GY T+ VL D+ E +K+ +
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQS 560
Query: 508 LNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGR 567
L HSE+LA+AYGLIST G+P+++ KNLR+C DCHTV K+IS I R+I++RDR RF
Sbjct: 561 LQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHH 620
Query: 568 FKGGVCSCGDYW 579
F G CSCGD+W
Sbjct: 621 FTDGSCSCGDFW 632
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 39/307 (12%)
Query: 118 RALTFSEATQIHSQVLRFGF---DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
++ + E QIH+ +LR YA G + + +F + D+
Sbjct: 38 KSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFL 97
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
+ A I+ + ++A L+ ++ PN+ T L +CS K G+++H +++
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVL 153
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS------------------------- 269
L ++ V ++D+Y+K G V A VF M
Sbjct: 154 KFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARA 213
Query: 270 -----CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAG 323
C + +++WN MI +A +G AL L ++ +G PD ++ +AAL AC+ G
Sbjct: 214 LFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIG 273
Query: 324 LVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+E G + +K S ++ N+K ++D+ + G ++EA N P D+V W +++
Sbjct: 274 ALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR-KDIVAWNAMI 332
Query: 384 GASKTYG 390
+G
Sbjct: 333 AGYAMHG 339
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/615 (37%), Positives = 346/615 (56%), Gaps = 52/615 (8%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPA--ADLSFAAQIFRRIQNPSTND 73
C ++ + Q+ A I +G+ + ++L CA S DL +A +IF ++ +
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS 92
Query: 74 WNAVLRGLAMSPQPTQAIS---WYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHS 130
WN ++RG + S + I+ +Y +S + + T LK CA+ E QIH
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 131 QVLRFGF---------------------------------------------DAXXXXXX 145
L++GF D
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 146 XXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRP 205
Y + GD AA+ +FD+M +R + SWN MISG + +A+ +F+ MK+ RP
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 206 NDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVF 265
N VT++ L A S+LG+L+ GE +H Y D + ++ ++ +A+IDMYSKCG ++KA VF
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF 332
Query: 266 QNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLV 325
+ + +++ITW+ MI FA++G A+D +M GV P V+Y+ L AC+H GLV
Sbjct: 333 ERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 326 EEGVRLFDLMKG-SVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLG 384
EEG R F M ++P ++HYG +VDLLGR+G + EA + I +MP+ PD V+W++LLG
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Query: 385 ASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKV 444
A + GNVEM + + L++M + G +V LSN+YA++ W +V +R M KD+RK
Sbjct: 452 ACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKD 511
Query: 445 PGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDK 504
PG S +ID +H+F+ D SHP KEI + + EI +++ GY T VL ++ EEDK
Sbjct: 512 PGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDK 571
Query: 505 DNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRAR 564
+N L+YHSEK+A A+GLIST G PI+++KNLRIC DCH+ IK+IS +Y R+I VRDR R
Sbjct: 572 ENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKR 631
Query: 565 FGRFKGGVCSCGDYW 579
F F+ G CSC DYW
Sbjct: 632 FHHFQDGSCSCMDYW 646
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 342/586 (58%), Gaps = 27/586 (4%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRT----KLLELCAISPAADLSFAAQIFRRIQNPST 71
C + +KQL A + T + P+ K+L+L S +D+++A ++F I+N S+
Sbjct: 58 CSDMSQLKQLHAFTLRT-TYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIENHSS 114
Query: 72 NDWNAVLRGLAMS-PQPTQAISWYRS-VSRSPQKVDALTCSFALKGCARALTFSEATQIH 129
WN ++R A + +A YR + R D T F LK CA FSE Q+H
Sbjct: 115 FMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVH 174
Query: 130 SQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPN 189
Q+++ GF Y G LD A+KVFDEMP+R + SWN+MI L + +
Sbjct: 175 CQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYD 234
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV---DEKLDMNVIVCN 246
A+ LF+ M + + P+ T+ LSAC+ LG+L G H +++ D + M+V+V N
Sbjct: 235 SALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKN 293
Query: 247 AVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMA--LDG 304
++I+MY KCG + A VFQ M + L +WN MI+ FA +G +A++ D+M +
Sbjct: 294 SLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEAMNFFDRMVDKREN 352
Query: 305 VHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
V P++V+++ L ACNH G V +G + FD+M + ++P ++HYG +VDL+ RAG I EA
Sbjct: 353 VRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEA 412
Query: 364 YDTINSMPMLPDVVLWQSLLGAS-KTYGNVEMAEMASRKLV------EMGSNSC-GDFVL 415
D + SMPM PD V+W+SLL A K +VE++E +R ++ E + +C G +VL
Sbjct: 413 IDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVL 472
Query: 416 LSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAK 475
LS VYA+ RW+DV VR+ M +RK PG S EI+ H+F GD SHP K+IY +
Sbjct: 473 LSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQ 532
Query: 476 MDEIKFRIKAYGYTA-KTDLVLHD-IGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVI 533
+ I R+++ GY ++ L D + K+ +L HSE+LA+A+GLI+ TPI++
Sbjct: 533 LKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIF 592
Query: 534 KNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
KNLR+C DCH V K+IS ++N EIIVRDR RF FK G CSC DYW
Sbjct: 593 KNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/599 (37%), Positives = 346/599 (57%), Gaps = 44/599 (7%)
Query: 19 LIHIKQLQAHLITTGKFHFHPSRTKLLELCA-----ISPAADLSFAAQIFRRIQNPSTND 73
+IH L+ HLI+ F SR LL LC P L +A IF +IQNP+
Sbjct: 30 IIHGFLLRTHLISDV---FVASR--LLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFV 84
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+N ++R + +P++A +Y + +S D +T F +K + Q HSQ++
Sbjct: 85 FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIV 144
Query: 134 RFGFDAXXXXXXXXXXXYA-------------------------------KTGDLDAAQK 162
RFGF YA K G ++ A++
Sbjct: 145 RFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENARE 204
Query: 163 VFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGA 222
+FDEMP R++ +W+ MI+G A+ + +AI LF+ MK EG N+ ++ +S+C+ LGA
Sbjct: 205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGA 264
Query: 223 LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
L+ GE + Y+V + +N+I+ A++DM+ +CG ++KA VF+ + T SL +W+++I
Sbjct: 265 LEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL-SWSSIIK 323
Query: 283 AFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS-VVK 341
A++G +KA+ QM G P V++ A L AC+H GLVE+G+ +++ MK ++
Sbjct: 324 GLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIE 383
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRK 401
P ++HYG +VD+LGRAG++ EA + I M + P+ + +LLGA K Y N E+AE
Sbjct: 384 PRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNM 443
Query: 402 LVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFIN 461
L+++ G +VLLSN+YA +W ++ +R+ M K V+K PG+S EID KI+KF
Sbjct: 444 LIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTM 503
Query: 462 GD-QSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYG 520
GD Q HP +I K +EI +I+ GY T D+ EE+K+++++ HSEKLA+AYG
Sbjct: 504 GDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYG 563
Query: 521 LISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
++ T GT I+++KNLR+C DCHTV K+IS +Y RE+IVRDR RF F+ GVCSC DYW
Sbjct: 564 MMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/539 (38%), Positives = 323/539 (59%), Gaps = 11/539 (2%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSV------SRSPQKV 104
S L A ++F I + W +++RG ++ A+S ++ + +
Sbjct: 122 STCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFL 181
Query: 105 DALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGD--LDAAQK 162
D++ + C+R IHS V++ GFD YAK G+ + A+K
Sbjct: 182 DSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARK 241
Query: 163 VFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM-KEEGWRPNDVTVLGALSACSQLG 221
+FD++ +D S+N+++S AQ NEA +F+R+ K + N +T+ L A S G
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
AL+ G+ +H ++ L+ +VIV ++IDMY KCG V+ A F M K++ +W MI
Sbjct: 302 ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMI 360
Query: 282 MAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-V 340
+ M+G KAL+L M GV P+ +++++ L AC+HAGL EG R F+ MKG V
Sbjct: 361 AGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGV 420
Query: 341 KPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASR 400
+P ++HYG +VDLLGRAG +++AYD I M M PD ++W SLL A + + NVE+AE++
Sbjct: 421 EPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVA 480
Query: 401 KLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFI 460
+L E+ S++CG ++LLS++YA RW DV+RVR M + + K PGFS E++ ++H F+
Sbjct: 481 RLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFL 540
Query: 461 NGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYG 520
GD+ HP ++IY + E+ ++ GY + T V HD+ EE+K+ L HSEKLA+A+G
Sbjct: 541 IGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFG 600
Query: 521 LISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+++TV G+ + V+KNLR+C DCH VIK+IS I +RE +VRD RF FK G CSCGDYW
Sbjct: 601 IMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 162/344 (47%), Gaps = 17/344 (4%)
Query: 64 RRIQNPSTNDWNAVLRGLAMSPQPTQAI---SWYRSVSRSPQKVDALTCSFALKGCARAL 120
R + WN+V+ LA S +A+ S R +S P + + C A+K C+
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTR-SSFPC--AIKACSSLF 90
Query: 121 TFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMIS 180
Q H Q FG+ + Y+ G L+ A+KVFDE+PKR+I SW +MI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGAL------SACSQLGALKQGEIVHGYIV 234
G +A++LFK + + +D L ++ SACS++ A E +H +++
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 235 DEKLDMNVIVCNAVIDMYSKC--GFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
D V V N ++D Y+K G V A +F + K +++N+++ +A +G +
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI-VDKDRVSYNSIMSVYAQSGMSNE 269
Query: 293 ALDLLDQMALDGVHP-DAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVV 351
A ++ ++ + V +A++ L A +H+G + G + D + ++ ++ S++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 352 DLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
D+ + GR++ A + M +V W +++ +G+ A
Sbjct: 330 DMYCKCGRVETARKAFDRMKN-KNVRSWTAMIAGYGMHGHAAKA 372
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/569 (38%), Positives = 325/569 (57%), Gaps = 42/569 (7%)
Query: 53 AADLSFAAQIFR-RIQNPSTNDWNAVLRGLAM---SPQPTQAISWYRSVSRSPQKVDALT 108
AA +++A IF R + WN ++R + SPQ IS Y + D T
Sbjct: 5 AAIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHT 64
Query: 109 CSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFD--- 165
F L L + H+Q+L FG D Y+ GDL +AQ+VFD
Sbjct: 65 FPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSG 124
Query: 166 ----------------------------EMPKRDIASWNAMISGLAQGSRPNEAIALFKR 197
EMP+R++ SW+ +I+G + EA+ LF+
Sbjct: 125 SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 198 MK-----EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMY 252
M+ E RPN+ T+ LSAC +LGAL+QG+ VH YI +++++++ A+IDMY
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMAL-DGVHPDAVS 311
+KCG +++A VF + K + ++ MI AM G + L +M D ++P++V+
Sbjct: 245 AKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 304
Query: 312 YLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
++ L AC H GL+ EG F +M + P+++HYG +VDL GR+G IKEA I SM
Sbjct: 305 FVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 364
Query: 371 PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVK 430
PM PDV++W SLL S+ G+++ E A ++L+E+ + G +VLLSNVYA RW +VK
Sbjct: 365 PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVK 424
Query: 431 RVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTA 490
+R M K + KVPG SY E++ +H+F+ GD+S + IYA +DEI R++ GY
Sbjct: 425 CIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVT 484
Query: 491 KTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIIS 550
T VL D+ E+DK+ AL+YHSEKLA+A+ L+ T GTP+++IKNLRICGDCH V+K+IS
Sbjct: 485 DTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMIS 544
Query: 551 NIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+++REI+VRD RF F+ G CSC D+W
Sbjct: 545 KLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 115/250 (46%), Gaps = 10/250 (4%)
Query: 49 AISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDAL- 107
A + A + A ++F + + W+ ++ G M + +A+ +R + + P+ +A
Sbjct: 137 AYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM-QLPKPNEAFV 195
Query: 108 -----TCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQK 162
T S L C R + +H+ + ++ + YAK G L+ A++
Sbjct: 196 RPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKR 255
Query: 163 VFDEM-PKRDIASWNAMISGLAQGSRPNEAIALFKRM-KEEGWRPNDVTVLGALSACSQL 220
VF+ + K+D+ +++AMI LA +E LF M + PN VT +G L AC
Sbjct: 256 VFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHR 315
Query: 221 GALKQGEIVHGYIVDE-KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNT 279
G + +G+ +++E + ++ ++D+Y + G + +A S +M ++ W +
Sbjct: 316 GLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGS 375
Query: 280 MIMAFAMNGD 289
++ M GD
Sbjct: 376 LLSGSRMLGD 385
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/570 (36%), Positives = 337/570 (59%), Gaps = 9/570 (1%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSR--TKLLELCAISPA-ADLSFAAQIFRRIQNPST 71
+C+SL + Q+QA+ I K H KL+ C SP + +S+A +F + P
Sbjct: 38 KCNSLRELMQIQAYAI---KSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 72 NDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQ 131
+N++ RG + P + S + + D T LK CA A E Q+H
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 132 VLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEA 191
++ G D Y + D+D+A+ VFD + + + +NAMI+G A+ +RPNEA
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 214
Query: 192 IALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDM 251
++LF+ M+ + +PN++T+L LS+C+ LG+L G+ +H Y V V A+IDM
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDM 274
Query: 252 YSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVS 311
++KCG +D A S+F+ M K W+ MI+A+A +G K++ + ++M + V PD ++
Sbjct: 275 FAKCGSLDDAVSIFEKMR-YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEIT 333
Query: 312 YLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
+L L AC+H G VEEG + F M + P++KHYGS+VDLL RAG +++AY+ I+ +
Sbjct: 334 FLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
Query: 371 PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVK 430
P+ P +LW+ LL A ++ N+++AE S ++ E+ + GD+V+LSN+YA ++W V
Sbjct: 394 PISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVD 453
Query: 431 RVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTA 490
+R+ M + KVPG S E++ +H+F +GD +++ +DE+ +K GY
Sbjct: 454 SLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVP 513
Query: 491 KTDLVLH-DIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKII 549
T +V+H ++ +++K+ L YHSEKLA+ +GL++T GT I+V+KNLR+C DCH K+I
Sbjct: 514 DTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLI 573
Query: 550 SNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
S I+ R++++RD RF F+ G CSCGD+W
Sbjct: 574 SLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/599 (35%), Positives = 335/599 (55%), Gaps = 35/599 (5%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAAD-LSFAAQIFRRIQNPSTND 73
RC +KQ+ A ++ TG + TK L C S ++D L +A +F P T
Sbjct: 23 RCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFL 82
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
WN ++RG + S +P +++ Y+ + S +A T LK C+ F E TQIH+Q+
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA---------------- 177
+ G++ YA TG+ A +FD +P+ D SWN+
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 178 ---------------MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGA 222
MISG Q EA+ LF M+ P++V++ ALSAC+QLGA
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 223 LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
L+QG+ +H Y+ ++ M+ ++ +IDMY+KCG +++A VF+N+ KS+ W +I
Sbjct: 263 LEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALIS 321
Query: 283 AFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VK 341
+A +G G +A+ +M G+ P+ +++ A L AC++ GLVEEG +F M+ +K
Sbjct: 322 GYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLK 381
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRK 401
P ++HYG +VDLLGRAG + EA I MP+ P+ V+W +LL A + + N+E+ E
Sbjct: 382 PTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEI 441
Query: 402 LVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFIN 461
L+ + G +V +N++A ++W R M + V KVPG S ++ H+F+
Sbjct: 442 LIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLA 501
Query: 462 GDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNAL-NYHSEKLAVAYG 520
GD+SHP ++I +K ++ +++ GY + + +L D+ ++D+ A+ + HSEKLA+ YG
Sbjct: 502 GDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYG 561
Query: 521 LISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
LI T GT I+++KNLR+C DCH V K+IS IY R+I++RDR RF F+ G CSCGDYW
Sbjct: 562 LIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/562 (37%), Positives = 328/562 (58%), Gaps = 6/562 (1%)
Query: 21 HIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRG 80
+K++ A ++ TG + T+LLE + D+ +A Q+F + P WN + +G
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVV--IGDMCYARQVFDEMHKPRIFLWNTLFKG 83
Query: 81 LAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAX 140
+ P +++ Y+ + + D T F +K ++ FS +H+ V+++GF
Sbjct: 84 YVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143
Query: 141 XXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE 200
Y K G+L +A+ +F+ M +D+ +WNA ++ Q A+ F +M
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 201 EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
+ + + TV+ LSAC QLG+L+ GE ++ E++D N+IV NA +DM+ KCG +
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN 320
A +F+ M +++++W+TMI+ +AMNGD +AL L M +G+ P+ V++L L AC+
Sbjct: 264 ARVLFEEMK-QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Query: 321 HAGLVEEGVRLFDLMKGSV---VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVV 377
HAGLV EG R F LM S ++P +HY +VDLLGR+G ++EAY+ I MP+ PD
Sbjct: 323 HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382
Query: 378 LWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMI 437
+W +LLGA + ++ + + + LVE + VLLSN+YAA +W V +VR M
Sbjct: 383 IWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMR 442
Query: 438 TKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLH 497
+KV +S E + KIH F GD+SHP K IY K+DEI +I+ GY T V H
Sbjct: 443 KLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFH 502
Query: 498 DIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREI 557
D+ E+K+ +L++HSEKLA+A+GLI G PI+V+KNLR C DCH K +S++ + EI
Sbjct: 503 DVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEI 562
Query: 558 IVRDRARFGRFKGGVCSCGDYW 579
I+RD+ RF F+ GVCSC ++W
Sbjct: 563 IMRDKNRFHHFRNGVCSCKEFW 584
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/530 (37%), Positives = 321/530 (60%), Gaps = 5/530 (0%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S + + +FR + P +NA++ G + + ++S ++ + S ++ + T
Sbjct: 267 SKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL- 325
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
+L + L A IH L+ F + Y+K ++++A+K+FDE P++
Sbjct: 326 VSLVPVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 383
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
+ SWNAMISG Q +AI+LF+ M++ + PN VT+ LSAC+QLGAL G+ VH
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
+ + ++ V A+I MY+KCG + +A +F M+ K+ +TWNTMI + ++G G
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLHGQG 502
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGS 349
+AL++ +M G+ P V++L L AC+HAGLV+EG +F+ M +P++KHY
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562
Query: 350 VVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNS 409
+VD+LGRAG ++ A I +M + P +W++LLGA + + + +A S KL E+ ++
Sbjct: 563 MVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDN 622
Query: 410 CGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNW 469
G VLLSN+++A + + VR+ + + K PG++ EI H F +GDQSHP
Sbjct: 623 VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQV 682
Query: 470 KEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTP 529
KEIY K+++++ +++ GY +T+L LHD+ EE+++ + HSE+LA+A+GLI+T GT
Sbjct: 683 KEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTE 742
Query: 530 IQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
I++IKNLR+C DCHTV K+IS I R I+VRD RF FK GVCSCGDYW
Sbjct: 743 IRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 166/389 (42%), Gaps = 21/389 (5%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
R S+ H+ Q A +I G + TKL + +S + +A IF +Q P +
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQ--RLSDLGAIYYARDIFLSVQRPDVFLF 86
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQ-KVDALTCSFALKGCARALTFSEATQIHSQVL 133
N ++RG +++ P ++S + + +S K ++ T +FA+ + IH Q +
Sbjct: 87 NVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAV 146
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
G D+ Y K ++ A+KVFD MP++D WN MISG + E+I
Sbjct: 147 VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQ 206
Query: 194 LFKRMKEEG-WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMY 252
+F+ + E R + T+L L A ++L L+ G +H + V I +Y
Sbjct: 207 VFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLY 266
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
SKCG + ++F+ ++ +N MI + NG+ +L L ++ L G + +
Sbjct: 267 SKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 313 LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL----GRAGRIKEAYDTIN 368
++ + H L+ + G +K N + SV L + I+ A +
Sbjct: 326 VSLVPVSGHLMLIYA-------IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD 378
Query: 369 SMP--MLPDVVLWQSLLGASKTYGNVEMA 395
P LP W +++ G E A
Sbjct: 379 ESPEKSLPS---WNAMISGYTQNGLTEDA 404
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/430 (45%), Positives = 282/430 (65%), Gaps = 2/430 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
YA+ G + A+ +FD+MPKRD SW AMI+G +Q EA+ LF +M+ EG R N +
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
ALS C+ + AL+ G+ +HG +V + V NA++ MY KCG +++A +F+ M+
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA- 471
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
K +++WNTMI ++ +G G AL + M +G+ PD + +A L AC+H GLV++G +
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 331 LFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
F M V PN +HY +VDLLGRAG +++A++ + +MP PD +W +LLGAS+ +
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 390 GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
GN E+AE A+ K+ M + G +VLLSN+YA+ RW DV ++R M K V+KVPG+S+
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSW 651
Query: 450 TEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALN 509
EI K H F GD+ HP EI+A ++E+ R+K GY +KT +VLHD+ EE+K+ +
Sbjct: 652 IEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVR 711
Query: 510 YHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFK 569
YHSE+LAVAYG++ +G PI+VIKNLR+C DCH IK ++ I R II+RD RF FK
Sbjct: 712 YHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFK 771
Query: 570 GGVCSCGDYW 579
G CSCGDYW
Sbjct: 772 DGSCSCGDYW 781
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 115/235 (48%), Gaps = 1/235 (0%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
+S A +F ++ W A++ G + S +A+ + + R +++ + S AL
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
CA + Q+H ++++ G++ Y K G ++ A +F EM +DI SW
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 478
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-EIVHGYIV 234
N MI+G ++ A+ F+ MK EG +P+D T++ LSACS G + +G + +
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
D + N ++D+ + G ++ A+++ +NM W T++ A ++G+
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGN 593
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 72/299 (24%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMI------------------------------- 179
Y + G+ + A+K+FDEMP+RD+ SWN MI
Sbjct: 105 YLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTML 164
Query: 180 SGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSA----------------------- 216
SG AQ ++A ++F RM E+ NDV+ LSA
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALV 220
Query: 217 ---CSQLGALKQGEIVHGYIVDEKLDM-NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK 272
C G +K+ +IV + +++ +V+ N +I Y++ G +D+A +F S +
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-SPVQ 279
Query: 273 SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF 332
+ TW M+ + N +A +L D+M + VS+ A L +E LF
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 333 DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGN 391
D+M N+ + +++ + G+I EA + + MP D V W +++ G+
Sbjct: 336 DVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPK-RDPVSWAAMIAGYSQSGH 389
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 129/309 (41%), Gaps = 39/309 (12%)
Query: 91 ISWYRSVSRSPQKVDALT-------CSFALKGCARALTFSEATQIHSQ------VLRFGF 137
I+ +R++SR Q++ + C+ A G A + ATQ Q +L+ G
Sbjct: 3 INKFRALSRRAQQLHYTSLNGLKRRCNNA-HGAANFHSLKRATQTQIQKSQTKPLLKCG- 60
Query: 138 DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKR 197
D+ Y +TG + A +VF MP+ S+N MISG + A LF
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 198 MKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGF 257
M E +V + G + + A + EI+ + +V N ++ Y++ G
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIMP--------ERDVCSWNTMLSGYAQNGC 172
Query: 258 VDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL---DQMALDGVHPDAVSYLA 314
VD A SVF M K+ ++WN ++ A+ N +A L + AL VS+
Sbjct: 173 VDDARSVFDRMP-EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL-------VSWNC 224
Query: 315 ALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLP 374
L + E + FD M V + +++ ++G+I EA + P +
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVS----WNTIITGYAQSGKIDEARQLFDESP-VQ 279
Query: 375 DVVLWQSLL 383
DV W +++
Sbjct: 280 DVFTWTAMV 288
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/560 (36%), Positives = 317/560 (56%), Gaps = 35/560 (6%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
DL A ++F I+ WN+++ G P +A+ ++ + K +T L
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTG------------------ 155
CA+ Q+ S + + Y K G
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299
Query: 156 -------------DLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMK-EE 201
D +AA++V + MP++DI +WNA+IS Q +PNEA+ +F ++ ++
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359
Query: 202 GWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKA 261
+ N +T++ LSAC+Q+GAL+ G +H YI + MN V +A+I MYSKCG ++K+
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 262 YSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
VF ++ + + W+ MI AM+G G +A+D+ +M V P+ V++ CAC+H
Sbjct: 420 REVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478
Query: 322 AGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQ 380
GLV+E LF M+ + + P KHY +VD+LGR+G +++A I +MP+ P +W
Sbjct: 479 TGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWG 538
Query: 381 SLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKD 440
+LLGA K + N+ +AEMA +L+E+ + G VLLSN+YA +W +V +R+ M
Sbjct: 539 ALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTG 598
Query: 441 VRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIG 500
++K PG S EID IH+F++GD +HP +++Y K+ E+ ++K+ GY + VL I
Sbjct: 599 LKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIE 658
Query: 501 EED-KDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIV 559
EE+ K+ +LN HSEKLA+ YGLIST I+VIKNLR+CGDCH+V K+IS +Y+REIIV
Sbjct: 659 EEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIV 718
Query: 560 RDRARFGRFKGGVCSCGDYW 579
RDR RF F+ G CSC D+W
Sbjct: 719 RDRYRFHHFRNGQCSCNDFW 738
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 213/440 (48%), Gaps = 35/440 (7%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
RC SL +KQ H+I TG F S +KL + A+S A L +A ++F I P++ W
Sbjct: 39 RCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAW 98
Query: 75 NAVLRGLAMSPQPTQAI-SWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
N ++R A P P +I ++ VS S + T F +K A + S +H +
Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ + Y GDLD+A KVF + ++D+ SWN+MI+G Q P++A+
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
LFK+M+ E + + VT++G LSAC+++ L+ G V YI + ++++N+ + NA++DMY+
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 254 KCGFVDKAYSVFQNMS------------------------------CTKSLITWNTMIMA 283
KCG ++ A +F M K ++ WN +I A
Sbjct: 279 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 338
Query: 284 FAMNGDGYKALDLLDQMALD-GVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKP 342
+ NG +AL + ++ L + + ++ ++ L AC G +E G + +K ++
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM 398
Query: 343 NMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKL 402
N +++ + + G ++++ + NS+ DV +W +++G +G A K+
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVEK-RDVFVWSAMIGGLAMHGCGNEAVDMFYKM 457
Query: 403 VEMGSNSCGDFVLLSNVYAA 422
E G V +NV+ A
Sbjct: 458 QEANVKPNG--VTFTNVFCA 475
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 16/256 (6%)
Query: 42 TKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVS-RS 100
T +L+ AIS D A ++ + WNA++ + +P +A+ + + +
Sbjct: 302 TTMLDGYAIS--EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359
Query: 101 PQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAA 160
K++ +T L CA+ IHS + + G Y+K GDL+ +
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 161 QKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQL 220
++VF+ + KRD+ W+AMI GLA NEA+ +F +M+E +PN VT ACS
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 479
Query: 221 GALKQGEIV-------HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKS 273
G + + E + +G + +EK C ++D+ + G+++KA + M S
Sbjct: 480 GLVDEAESLFHQMESNYGIVPEEKH----YAC--IVDVLGRSGYLEKAVKFIEAMPIPPS 533
Query: 274 LITWNTMIMAFAMNGD 289
W ++ A ++ +
Sbjct: 534 TSVWGALLGACKIHAN 549
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/520 (38%), Positives = 312/520 (60%), Gaps = 15/520 (2%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKV-DALTCSFALKGCARALTFSEATQIHSQV 132
WNA++ G + + +A+ + + S + ++ T + + C R+ FS IH V
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 133 LRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAI 192
++ G D Y++ G +D A ++F +M RD+ +WN MI+G +A+
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 193 ALFKRMK-----------EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMN 241
L +M+ +PN +T++ L +C+ L AL +G+ +H Y + L +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551
Query: 242 VIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
V V +A++DMY+KCG + + VF + K++ITWN +IMA+ M+G+G +A+DLL M
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRI 360
+ GV P+ V++++ AC+H+G+V+EG+R+F +MK V+P+ HY VVDLLGRAGRI
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRI 670
Query: 361 KEAYDTINSMPM-LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNV 419
KEAY +N MP W SLLGAS+ + N+E+ E+A++ L+++ N +VLL+N+
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANI 730
Query: 420 YAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEI 479
Y++ W VR M + VRK PG S+ E ++HKF+ GD SHP +++ ++ +
Sbjct: 731 YSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Query: 480 KFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRIC 539
R++ GY T VLH++ E++K+ L HSEKLA+A+G+++T GT I+V KNLR+C
Sbjct: 791 WERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVC 850
Query: 540 GDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
DCH K IS I +REII+RD RF RFK G CSCGDYW
Sbjct: 851 NDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 141/311 (45%), Gaps = 10/311 (3%)
Query: 36 HFHPSRTKLLELCAISPAAD-LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWY 94
H HP + A A +S A IF Q+ S W +LR S +A+ Y
Sbjct: 27 HKHPYLLRATPTSATEDVASAVSGAPSIFIS-QSRSPEWWIDLLRSKVRSNLLREAVLTY 85
Query: 95 RSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDA-XXXXXXXXXXXYAK 153
+ K D LK A QIH+ V +FG+ Y K
Sbjct: 86 VDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRK 145
Query: 154 TGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGA 213
GD A KVFD + +R+ SWN++IS L + A+ F+ M +E P+ T++
Sbjct: 146 CGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 205
Query: 214 LSACSQLG---ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
++ACS L L G+ VH Y + K ++N + N ++ MY K G + + + +
Sbjct: 206 VTACSNLPMPEGLMMGKQVHAYGL-RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG- 263
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+ L+TWNT++ + N +AL+ L +M L+GV PD + + L AC+H ++ G
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 331 L--FDLMKGSV 339
L + L GS+
Sbjct: 324 LHAYALKNGSL 334
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 144/339 (42%), Gaps = 16/339 (4%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
D ++F RI + WN+++ L + A+ +R + + + T +
Sbjct: 147 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 206
Query: 114 KGCARALTFSEATQIHSQVLRFGF---DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
C+ L E + QV +G + Y K G L +++ + R
Sbjct: 207 TACSN-LPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 265
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
D+ +WN ++S L Q + EA+ + M EG P++ T+ L ACS L L+ G+ +H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 231 GYIV-DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
Y + + LD N V +A++DMY C V VF M + + WN MI ++ N
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQNEH 384
Query: 290 GYKALDLLDQMALD-GVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH-- 346
+AL L M G+ ++ + + AC +G + + G VVK +
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK----EAIHGFVVKRGLDRDR 440
Query: 347 --YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+++D+ R G+I A M D+V W +++
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMI 478
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 12/225 (5%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAI-------SWYRSVSRSPQKV---- 104
+ A +IF ++++ WN ++ G S A+ + R VS+ +V
Sbjct: 456 IDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKP 515
Query: 105 DALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVF 164
+++T L CA ++ +IH+ ++ YAK G L ++KVF
Sbjct: 516 NSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 165 DEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALK 224
D++P++++ +WN +I EAI L + M +G +PN+VT + +ACS G +
Sbjct: 576 DQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 225 QG-EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
+G I + D ++ + V+D+ + G + +AY + M
Sbjct: 636 EGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 332/545 (60%), Gaps = 10/545 (1%)
Query: 42 TKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSP 101
TKL+ + S + +A ++F + + + WNA+ R L ++ + + Y ++R
Sbjct: 116 TKLIGM--YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIG 173
Query: 102 QKVDALTCSFALKGC-ARALTFS---EATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL 157
+ D T ++ LK C A T + + +IH+ + R G+ + YA+ G +
Sbjct: 174 VESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCV 233
Query: 158 DAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG--WRPNDVTVLGALS 215
D A VF MP R++ SW+AMI+ A+ + EA+ F+ M E PN VT++ L
Sbjct: 234 DYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQ 293
Query: 216 ACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI 275
AC+ L AL+QG+++HGYI+ LD + V +A++ MY +CG ++ VF M + ++
Sbjct: 294 ACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH-DRDVV 352
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
+WN++I ++ ++G G KA+ + ++M +G P V++++ L AC+H GLVEEG RLF+ M
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412
Query: 336 -KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEM 394
+ +KP ++HY +VDLLGRA R+ EA + M P +W SLLG+ + +GNVE+
Sbjct: 413 WRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVEL 472
Query: 395 AEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDC 454
AE ASR+L + + G++VLL+++YA Q W +VKRV++ + + ++K+PG + E+
Sbjct: 473 AERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRR 532
Query: 455 KIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEK 514
K++ F++ D+ +P ++I+A + ++ +K GY +T VL+++ E+K+ + HSEK
Sbjct: 533 KMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEK 592
Query: 515 LAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCS 574
LA+A+GLI+T G PI++ KNLR+C DCH K IS +EI+VRD RF RFK GVCS
Sbjct: 593 LALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCS 652
Query: 575 CGDYW 579
CGDYW
Sbjct: 653 CGDYW 657
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 20/326 (6%)
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
N +++ L + QAI S Q+ T + C + S+A ++H +L
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESSPSQQ----TYELLILCCGHRSSLSDALRVHRHILD 105
Query: 135 FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIAL 194
G D Y+ G +D A+KVFD+ KR I WNA+ L E + L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 195 FKRMKEEGWRPNDVTVLGALSAC----SQLGALKQGEIVHGYIVDEKLDMNVIVCNAVID 250
+ +M G + T L AC + L +G+ +H ++ +V + ++D
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 251 MYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG--VHPD 308
MY++ G VD A VF M +++++W+ MI +A NG ++AL +M + P+
Sbjct: 226 MYARFGCVDYASYVFGGMP-VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 309 AVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH----YGSVVDLLGRAGRIKEAY 364
+V+ ++ L AC +E+G L+ G +++ + ++V + GR G+++
Sbjct: 285 SVTMVSVLQACASLAALEQG----KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQ 340
Query: 365 DTINSMPMLPDVVLWQSLLGASKTYG 390
+ M DVV W SL+ + +G
Sbjct: 341 RVFDRMHD-RDVVSWNSLISSYGVHG 365
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 316/528 (59%), Gaps = 12/528 (2%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F I WNA++ G A + +A+ ++ + ++ + D T + CA+
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+ + Q+H + GF + Y+K G+L+ A +F+ +P +D+ SWN +
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
I G + EA+ LF+ M G PNDVT+L L AC+ LGA+ G +H YI D++L
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI-DKRL 397
Query: 239 DMNVIVCNA------VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
V NA +IDMY+KCG ++ A+ VF ++ KSL +WN MI FAM+G
Sbjct: 398 KG---VTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADA 453
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVV 351
+ DL +M G+ PD ++++ L AC+H+G+++ G +F M + P ++HYG ++
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513
Query: 352 DLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCG 411
DLLG +G KEA + IN M M PD V+W SLL A K +GNVE+ E + L+++ + G
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 573
Query: 412 DFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKE 471
+VLLSN+YA+ RW++V + R + K ++KVPG S EID +H+FI GD+ HP +E
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633
Query: 472 IYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQ 531
IY ++E++ ++ G+ T VL ++ EE K+ AL +HSEKLA+A+GLIST GT +
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693
Query: 532 VIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
++KNLR+C +CH K+IS IY REII RDR RF F+ GVCSC DYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 198/391 (50%), Gaps = 39/391 (9%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAAD-LSFAAQIFRRIQNPSTNDW 74
C +L ++ + A +I G + + + +KL+E C +SP + L +A +F+ IQ P+ W
Sbjct: 43 CKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIW 102
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
N + RG A+S P A+ Y + ++ T F LK CA++ F E QIH VL+
Sbjct: 103 NTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLK 162
Query: 135 FGFDAXXXXXXXXXXXYAKTGDLD-------------------------------AAQKV 163
G D Y + G L+ AQK+
Sbjct: 163 LGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKL 222
Query: 164 FDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGAL 223
FDE+P +D+ SWNAMISG A+ EA+ LFK M + RP++ T++ +SAC+Q G++
Sbjct: 223 FDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 224 KQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
+ G VH +I D N+ + NA+ID+YSKCG ++ A +F+ + K +I+WNT+I
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP-YKDVISWNTLIGG 341
Query: 284 FAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG----VRLFDLMKGSV 339
+ +AL L +M G P+ V+ L+ L AC H G ++ G V + +KG
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 340 VKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
+++ S++D+ + G I+ A+ NS+
Sbjct: 402 NASSLR--TSLIDMYAKCGDIEAAHQVFNSI 430
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 3/242 (1%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S +L A +F R+ WN ++ G +A+ ++ + RS + + +T
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 371
Query: 111 FALKGCARALTFSEATQIHSQVLRF--GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP 168
L CA IH + + G YAK GD++AA +VF+ +
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-E 227
+ ++SWNAMI G A R + + LF RM++ G +P+D+T +G LSACS G L G
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
I D K+ + +ID+ G +A + M + W +++ A M+
Sbjct: 492 IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMH 551
Query: 288 GD 289
G+
Sbjct: 552 GN 553
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/522 (38%), Positives = 310/522 (59%), Gaps = 4/522 (0%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARAL 120
++F R+ WN++++ ++ QP +AIS ++ + S + D LT ++
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 121 TFSEATQIHSQVLRFG-FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMI 179
+ LR G F YAK G +D+A+ VF+ +P D+ SWN +I
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 180 SGLAQGSRPNEAIALFKRMKEEG-WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
SG AQ +EAI ++ M+EEG N T + L ACSQ GAL+QG +HG ++ L
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
++V V ++ DMY KCG ++ A S+F + S + WNT+I +G G KA+ L
Sbjct: 483 YLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS-VPWNTLIACHGFHGHGEKAVMLFK 541
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRA 357
+M +GV PD ++++ L AC+H+GLV+EG F++M+ + P++KHYG +VD+ GRA
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLS 417
G+++ A I SM + PD +W +LL A + +GNV++ ++AS L E+ G VLLS
Sbjct: 602 GQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Query: 418 NVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMD 477
N+YA+ +W V +R K +RK PG+S E+D K+ F G+Q+HP ++E+Y ++
Sbjct: 662 NMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELT 721
Query: 478 EIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLR 537
++ ++K GY VL D+ +++K++ L HSE+LA+A+ LI+T T I++ KNLR
Sbjct: 722 ALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLR 781
Query: 538 ICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+CGDCH+V K IS I REIIVRD RF FK GVCSCGDYW
Sbjct: 782 VCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 182/347 (52%), Gaps = 8/347 (2%)
Query: 62 IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT 121
+F + WNA++ G S +A++ +S + +D++T L C A
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALT----LSNGLRAMDSVTVVSLLSACTEAGD 262
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISG 181
F+ IHS ++ G ++ YA+ G L QKVFD M RD+ SWN++I
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 182 LAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM- 240
+P AI+LF+ M+ +P+ +T++ S SQLG ++ V G+ + + +
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
++ + NAV+ MY+K G VD A +VF + T +I+WNT+I +A NG +A+++ + M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNT-DVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 301 ALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGR 359
+G + + ++++ L AC+ AG + +G++L + + + ++ S+ D+ G+ GR
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 360 IKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+++A +P + + V W +L+ +G+ E A M +++++ G
Sbjct: 502 LEDALSLFYQIPRV-NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 174/380 (45%), Gaps = 19/380 (5%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLEL-CAISPAADLSFAAQIFRRIQNPSTNDW 74
C +L K L A L+ + + KL+ L C + +++ A F IQN W
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYL---GNVALARHTFDHIQNRDVYAW 120
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKV-DALTCSFALKGCARALTFSEATQIHSQVL 133
N ++ G + ++ I + S D T LK C T + +IH L
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLAL 177
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+FGF Y++ + A+ +FDEMP RD+ SWNAMISG Q EA+
Sbjct: 178 KFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT 237
Query: 194 LFKRMKEEGWRPND-VTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMY 252
L G R D VTV+ LSAC++ G +G +H Y + L+ + V N +ID+Y
Sbjct: 238 L-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
++ G + VF M + LI+WN++I A+ +N +A+ L +M L + PD ++
Sbjct: 293 AEFGRLRDCQKVFDRMY-VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 313 LAALCACNHAGLVE--EGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
++ + G + V+ F L KG ++ ++ +VV + + G + A N +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 371 PMLPDVVLWQSLLGASKTYG 390
P DV+ W +++ G
Sbjct: 411 PN-TDVISWNTIISGYAQNG 429
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/567 (37%), Positives = 334/567 (58%), Gaps = 15/567 (2%)
Query: 21 HIKQLQAHLITTGKFHFHPSRTKLLELCAISPAAD-LSFAAQIFRRIQNPSTNDWNAVLR 79
++Q+ AHLI TG + SR+ L +L ++ +A +++ +F + P +N+V++
Sbjct: 24 QLQQVHAHLIVTG---YGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIK 80
Query: 80 GLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCA--RALTFSEATQIHSQVLRFGF 137
+ P +++YR + S T + +K CA AL + H+ V FG
Sbjct: 81 STSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL 140
Query: 138 DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKR 197
D Y+K GD++ A++VFD MP++ I +WN+++SG Q +EAI +F +
Sbjct: 141 DTYVQAALVTF--YSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ 198
Query: 198 MKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGF 257
M+E G+ P+ T + LSAC+Q GA+ G VH YI+ E LD+NV + A+I++YS+CG
Sbjct: 199 MRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGD 258
Query: 258 VDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALD-GVHPDAVSYLAAL 316
V KA VF M T ++ W MI A+ +G G +A++L ++M D G P+ V+++A L
Sbjct: 259 VGKAREVFDKMKET-NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVL 317
Query: 317 CACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPD 375
AC HAGLVEEG ++ M S + P ++H+ +VD+LGRAG + EAY I+ +
Sbjct: 318 SACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGK 377
Query: 376 VV---LWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRV 432
LW ++LGA K + N ++ +++L+ + ++ G V+LSN+YA + +V +
Sbjct: 378 ATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHI 437
Query: 433 REAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKT 492
R+ M+ ++RK G+S E++ K + F GD+SH EIY ++ + R K GY +
Sbjct: 438 RDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVS 497
Query: 493 DLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNI 552
+ V+H + EE+K+ AL YHSEKLAVA+GL+ TV+ I ++KNLRIC DCH+ K IS +
Sbjct: 498 EEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIV 556
Query: 553 YNREIIVRDRARFGRFKGGVCSCGDYW 579
NR+I VRD+ RF F+ G CSC DYW
Sbjct: 557 SNRQITVRDKLRFHHFQNGSCSCLDYW 583
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/560 (36%), Positives = 319/560 (56%), Gaps = 6/560 (1%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
+++ AH+I T RT+LL L A ++ + + W A++ +
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDC--LEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
+ ++A++ + + RS K + T + L C RA QIH ++++ +D+
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF 189
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
YAK G + A+++F+ +P+RD+ S A+I+G AQ EA+ +F R+ EG
Sbjct: 190 VGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG 249
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
PN VT L+A S L L G+ H +++ +L ++ N++IDMYSKCG + A
Sbjct: 250 MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAR 309
Query: 263 SVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNH 321
+F NM ++ I+WN M++ ++ +G G + L+L M + V PDAV+ LA L C+H
Sbjct: 310 RLFDNMP-ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 322 AGLVEEGVRLFDLMKGSV--VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLW 379
+ + G+ +FD M KP +HYG +VD+LGRAGRI EA++ I MP P +
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVL 428
Query: 380 QSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITK 439
SLLGA + + +V++ E R+L+E+ + G++V+LSN+YA+ RW DV VR M+ K
Sbjct: 429 GSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQK 488
Query: 440 DVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDI 499
V K PG S+ + + +H F D++HP +E+ AKM EI ++K GY VL+D+
Sbjct: 489 AVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDV 548
Query: 500 GEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIV 559
EE K+ L HSEKLA+ +GLI+T G PI+V KNLRIC DCH KI S ++ RE+ +
Sbjct: 549 DEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSL 608
Query: 560 RDRARFGRFKGGVCSCGDYW 579
RD+ RF + G+CSCGDYW
Sbjct: 609 RDKNRFHQIVDGICSCGDYW 628
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 16/246 (6%)
Query: 161 QKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEE-GWRPNDVTVLGALSACSQ 219
+ F P + IS L R EA+ + E G+ D L+AC
Sbjct: 9 HRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDAL----LNACLD 64
Query: 220 LGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNT 279
AL+ G+ VH +++ + + ++ Y KC ++ A V M K++++W
Sbjct: 65 KRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP-EKNVVSWTA 123
Query: 280 MIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV 339
MI ++ G +AL + +M P+ ++ L +C A G+ L + G +
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA----SGLGLGKQIHGLI 179
Query: 340 VKPNMKHY----GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG-NVEM 394
VK N + S++D+ +AG+IKEA + +P DVV +++ G + E
Sbjct: 180 VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE-RDVVSCTAIIAGYAQLGLDEEA 238
Query: 395 AEMASR 400
EM R
Sbjct: 239 LEMFHR 244
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/521 (37%), Positives = 295/521 (56%), Gaps = 2/521 (0%)
Query: 60 AQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARA 119
A+I N WNA++ G S + + + + + ++ D T + K C
Sbjct: 471 AEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 120 LTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMI 179
++ Q+H+ ++ G+D Y K GD+ AAQ FD +P D +W MI
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 180 SGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLD 239
SG + A +F +M+ G P++ T+ A S L AL+QG +H +
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 650
Query: 240 MNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
+ V +++DMY+KCG +D AY +F+ + ++ WN M++ A +G+G + L L Q
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIE-MMNITAWNAMLVGLAQHGEGKETLQLFKQ 709
Query: 300 MALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAG 358
M G+ PD V+++ L AC+H+GLV E + M G +KP ++HY + D LGRAG
Sbjct: 710 MKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAG 769
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSN 418
+K+A + I SM M ++++LL A + G+ E + + KL+E+ +VLLSN
Sbjct: 770 LVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSN 829
Query: 419 VYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDE 478
+YAA +W ++K R M V+K PGFS+ E+ KIH F+ D+S+ + IY K+ +
Sbjct: 830 MYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKD 889
Query: 479 IKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRI 538
+ IK GY +TD L D+ EE+K+ AL YHSEKLAVA+GL+ST TPI+VIKNLR+
Sbjct: 890 MIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRV 949
Query: 539 CGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
CGDCH +K I+ +YNREI++RD RF RFK G+CSCGDYW
Sbjct: 950 CGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 159/344 (46%), Gaps = 20/344 (5%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
FA +F + WN+V+ G+A + +A+ + + R K D T + LK
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Query: 116 CA---RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
+ L+ S+ Q+H ++ + Y++ + A+ +F E D+
Sbjct: 426 ASSLPEGLSLSK--QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDL 482
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
+WNAM++G Q ++ + LF M ++G R +D T+ C L A+ QG+ VH Y
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
+ D+++ V + ++DMY KCG + A F ++ + W TMI NG+ +
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD-VAWTTMISGCIENGEEER 601
Query: 293 ALDLLDQMALDGVHPD--AVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH---- 346
A + QM L GV PD ++ LA +C A +E+G ++ + +K N +
Sbjct: 602 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTA--LEQGRQI----HANALKLNCTNDPFV 655
Query: 347 YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
S+VD+ + G I +AY + M+ ++ W ++L +G
Sbjct: 656 GTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHG 698
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 4/324 (1%)
Query: 84 SPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXX 143
S Q + + + + S + D +T L + + + Q+H L+ G D
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV 352
Query: 144 XXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW 203
Y K A+ VFD M +RD+ SWN++I+G+AQ EA+ LF ++ G
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412
Query: 204 RPNDVTVLGALSACSQL-GALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
+P+ T+ L A S L L + VH + + + V A+ID YS+ + +A
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 263 SVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHA 322
+F+ + L+ WN M+ + + DG+K L L M G D + C
Sbjct: 473 ILFERHNF--DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 323 GLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSL 382
+ +G ++ S ++ ++D+ + G + A +S+P +PD V W ++
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP-VPDDVAWTTM 589
Query: 383 LGASKTYGNVEMAEMASRKLVEMG 406
+ G E A ++ MG
Sbjct: 590 ISGCIENGEEERAFHVFSQMRLMG 613
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR- 187
H+++L F + Y+K G L A++VFD+MP RD+ SWN++++ AQ S
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 188 ----PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVI 243
+A LF+ ++++ + +T+ L C G + E HGY LD +
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALD 303
V A++++Y K G V + +F+ M + ++ WN M+ A+ G +A+DL
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 304 GVHPDAVS 311
G++P+ ++
Sbjct: 241 GLNPNEIT 248
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Query: 35 FHFHPSRTKLLELCAI-SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPT----- 88
F +P R + L ++ S L++A ++F ++ + WN++L A S +
Sbjct: 68 FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQ 127
Query: 89 QAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXX 148
QA +R + + +T S LK C + + H + G D
Sbjct: 128 QAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALV 187
Query: 149 XXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDV 208
Y K G + + +F+EMP RD+ WN M+ + EAI L G PN++
Sbjct: 188 NIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEI 247
Query: 209 TV 210
T+
Sbjct: 248 TL 249
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 156 DLDAAQ-KVF----DEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
D DA Q K F D +I N +S + + + F M E + VT
Sbjct: 259 DSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTF 318
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+ L+ ++ +L G+ VH + LD+ + V N++I+MY K A +VF NMS
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS- 377
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+ LI+WN++I A NG +A+ L Q+ G+ PD + + L A A + EG+
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA---ASSLPEGLS 434
Query: 331 LFDLMKGSVVKPN 343
L + +K N
Sbjct: 435 LSKQVHVHAIKIN 447
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 7/178 (3%)
Query: 223 LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
L G+ H I+ + + + N +I MYSKCG + A VF M + L++WN+++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP-DRDLVSWNSILA 113
Query: 283 AFAMNGDGY-----KALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKG 337
A+A + + +A L + D V+ ++ L C H+G V
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 338 SVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ + G++V++ + G++KE MP DVVLW +L A G E A
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEA 230
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/556 (35%), Positives = 311/556 (55%), Gaps = 4/556 (0%)
Query: 25 LQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMS 84
L + ++ G H + T LL + S + L+ A ++F I + S W A+ G S
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSI--YSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS 190
Query: 85 PQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXX 144
+ +AI ++ + K D+ L C I +
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 145 XXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWR 204
YAK G ++ A+ VFD M ++DI +W+ MI G A S P E I LF +M +E +
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310
Query: 205 PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSV 264
P+ +++G LS+C+ LGAL GE I + N+ + NA+IDMY+KCG + + + V
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEV 370
Query: 265 FQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGL 324
F+ M K ++ N I A NG + + Q G+ PD ++L LC C HAGL
Sbjct: 371 FKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429
Query: 325 VEEGVRLFDLMKGS-VVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+++G+R F+ + +K ++HYG +VDL GRAG + +AY I MPM P+ ++W +LL
Sbjct: 430 IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489
Query: 384 GASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRK 443
+ + ++AE ++L+ + + G++V LSN+Y+ RW + VR+ M K ++K
Sbjct: 490 SGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKK 549
Query: 444 VPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEED 503
+PG+S+ E++ K+H+F+ D+SHP +IYAK++++ ++ G+ T+ V D+ EE+
Sbjct: 550 IPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEE 609
Query: 504 KDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRA 563
K+ L YHSEKLAVA GLIST +G I+V+KNLR+CGDCH V+K+IS I REI+VRD
Sbjct: 610 KERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNN 669
Query: 564 RFGRFKGGVCSCGDYW 579
RF F G CSC DYW
Sbjct: 670 RFHCFTNGSCSCNDYW 685
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 181/375 (48%), Gaps = 4/375 (1%)
Query: 21 HIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRG 80
H+KQ+ LI H LL+ S+ +F Q P+ +N+++ G
Sbjct: 28 HLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYL--LFSHTQFPNIFLYNSLING 85
Query: 81 LAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAX 140
+ + + + S+ + + T LK C RA + +HS V++ GF+
Sbjct: 86 FVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHD 145
Query: 141 XXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE 200
Y+ +G L+ A K+FDE+P R + +W A+ SG R EAI LFK+M E
Sbjct: 146 VAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVE 205
Query: 201 EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
G +P+ ++ LSAC +G L GE + Y+ + ++ N V ++++Y+KCG ++K
Sbjct: 206 MGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN 320
A SVF +M K ++TW+TMI +A N + ++L QM + + PD S + L +C
Sbjct: 266 ARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 321 HAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQ 380
G ++ G L+ N+ +++D+ + G + ++ M V++
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 381 SLLGASKTYGNVEMA 395
++ G +K G+V+++
Sbjct: 385 AISGLAKN-GHVKLS 398
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/561 (36%), Positives = 316/561 (56%), Gaps = 12/561 (2%)
Query: 29 LITTGK-FHFHPSRTKLLELCAISPA--------ADLSFAAQIFRRIQNPSTNDWNAVLR 79
LI+ GK H + R+ L IS A L A Q+F + + WN+++
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 80 GLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDA 139
+ P +A+ ++ + K ++ AL CA IH + G D
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 140 XXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMK 199
Y K ++D A +F ++ R + SWNAMI G AQ RP +A+ F +M+
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 200 EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVD 259
+P+ T + ++A ++L + +HG ++ LD NV V A++DMY+KCG +
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 260 KAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
A +F MS + + TWN MI + +G G AL+L ++M + P+ V++L+ + AC
Sbjct: 491 IARLIFDMMS-ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Query: 320 NHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVL 378
+H+GLVE G++ F +MK + ++ +M HYG++VDLLGRAGR+ EA+D I MP+ P V +
Sbjct: 550 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609
Query: 379 WQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMIT 438
+ ++LGA + + NV AE A+ +L E+ + G VLL+N+Y A W V +VR +M+
Sbjct: 610 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 669
Query: 439 KDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHD 498
+ +RK PG S EI ++H F +G +HP+ K+IYA ++++ IK GY T+LVL
Sbjct: 670 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-G 728
Query: 499 IGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREII 558
+ + K+ L+ HSEKLA+++GL++T GT I V KNLR+C DCH K IS + REI+
Sbjct: 729 VENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIV 788
Query: 559 VRDRARFGRFKGGVCSCGDYW 579
VRD RF FK G CSCGDYW
Sbjct: 789 VRDMQRFHHFKNGACSCGDYW 809
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 168/332 (50%), Gaps = 2/332 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F R+ WN ++ G + + A+ +S+ K +T L +
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
S +IH +R GFD+ YAK G L+ A+++FD M +R++ SWN+M
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
I Q P EA+ +F++M +EG +P DV+V+GAL AC+ LG L++G +H V+ L
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
D NV V N++I MY KC VD A S+F + +++L++WN MI+ FA NG AL+
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQ-SRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
QM V PD +Y++ + A + + ++ S + N+ ++VD+ + G
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
I A I M V W +++ T+G
Sbjct: 488 AIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 160/314 (50%), Gaps = 3/314 (0%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
RC SL ++Q+ + G + H +TKL+ L + D AA++F I + +
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDE--AARVFEPIDSKLNVLY 103
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
+ +L+G A +A+ ++ + + ++ LK C +IH +++
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 135 FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIAL 194
GF YAK ++ A+KVFD MP+RD+ SWN +++G +Q A+ +
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 195 FKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSK 254
K M EE +P+ +T++ L A S L + G+ +HGY + D V + A++DMY+K
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 255 CGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLA 314
CG ++ A +F M +++++WN+MI A+ N + +A+ + +M +GV P VS +
Sbjct: 284 CGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 342
Query: 315 ALCACNHAGLVEEG 328
AL AC G +E G
Sbjct: 343 ALHACADLGDLERG 356
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 305/526 (57%), Gaps = 3/526 (0%)
Query: 56 LSFAAQIFRRIQNPSTN--DWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
L A +F + P W A++ A + +P +A+ + + + K D + L
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
+ IH+ V++ G + YAK G + A+ +FD+M ++
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI 289
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
WNAMISG A+ EAI +F M + RP+ +++ A+SAC+Q+G+L+Q ++ Y+
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+V + +A+IDM++KCG V+ A VF + + + ++ W+ MI+ + ++G +A
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVF-DRTLDRDVVVWSAMIVGYGLHGRAREA 408
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDL 353
+ L M GVHP+ V++L L ACNH+G+V EG F+ M + P +HY V+DL
Sbjct: 409 ISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDL 468
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDF 413
LGRAG + +AY+ I MP+ P V +W +LL A K + +VE+ E A+++L + ++ G +
Sbjct: 469 LGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHY 528
Query: 414 VLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIY 473
V LSN+YAA + W V VR M K + K G S+ E+ ++ F GD+SHP ++EI
Sbjct: 529 VQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIE 588
Query: 474 AKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVI 533
+++ I+ R+K G+ A D LHD+ +E+ + L HSE++A+AYGLIST GTP+++
Sbjct: 589 RQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRIT 648
Query: 534 KNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
KNLR C +CH K+IS + +REI+VRD RF FK GVCSCGDYW
Sbjct: 649 KNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 198/403 (49%), Gaps = 7/403 (1%)
Query: 21 HIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRG 80
+KQ+ A L+ G TKL+ A S D++FA Q+F + P WNA++RG
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQIFPWNAIIRG 93
Query: 81 LAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAX 140
+ + A+ Y ++ + D+ T LK C+ +H+QV R GFDA
Sbjct: 94 YSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153
Query: 141 XXXXXXXXXXYAKTGDLDAAQKVFD--EMPKRDIASWNAMISGLAQGSRPNEAIALFKRM 198
YAK L +A+ VF+ +P+R I SW A++S AQ P EA+ +F +M
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 199 KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFV 258
++ +P+ V ++ L+A + L LKQG +H +V L++ + ++ MY+KCG V
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 273
Query: 259 DKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCA 318
A +F M + +LI WN MI +A NG +A+D+ +M V PD +S +A+ A
Sbjct: 274 ATAKILFDKMK-SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 319 CNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVL 378
C G +E+ +++ + S + ++ +++D+ + G + E + + DVV+
Sbjct: 333 CAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVV 391
Query: 379 WQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYA 421
W +++ +G A ++ + +E G D L + A
Sbjct: 392 WSAMIVGYGLHGRAREA-ISLYRAMERGGVHPNDVTFLGLLMA 433
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 143/312 (45%), Gaps = 43/312 (13%)
Query: 123 SEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGL 182
++ QIH+++L G + GD+ A++VFD++P+ I WNA+I G
Sbjct: 35 AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94
Query: 183 AQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNV 242
++ + +A+ ++ M+ P+ T L ACS L L+ G VH + D +V
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 243 IVCNAVIDMYSKCGFVDKAYSVFQNMSC-TKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
V N +I +Y+KC + A +VF+ + +++++W ++ A+A NG+ +AL++ QM
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 302 LDGVHPDAVSYLAALCACN-----------HAGLVEEGVR-------------------- 330
V PD V+ ++ L A HA +V+ G+
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 331 ----LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLL 383
LFD MK PN+ + +++ + G +EA D + M + PD + S +
Sbjct: 275 TAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 384 GASKTYGNVEMA 395
A G++E A
Sbjct: 331 SACAQVGSLEQA 342
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/522 (37%), Positives = 297/522 (56%), Gaps = 3/522 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A Q+FR ++ S + W A+++GLA + +AI +R + K+D L C
Sbjct: 224 ALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGG 282
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+E QIH+ ++R F Y K L A+ VFD M ++++ SW AM
Sbjct: 283 LGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAM 342
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
+ G Q R EA+ +F M+ G P+ T+ A+SAC+ + +L++G HG + L
Sbjct: 343 VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL 402
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
V V N+++ +Y KCG +D + +F M+ + ++W M+ A+A G + + L D
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN-VRDAVSWTAMVSAYAQFGRAVETIQLFD 461
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRA 357
+M G+ PD V+ + AC+ AGLVE+G R F LM + P++ HY ++DL R+
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLS 417
GR++EA IN MP PD + W +LL A + GN+E+ + A+ L+E+ + + LLS
Sbjct: 522 GRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLS 581
Query: 418 NVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMD 477
++YA++ +W V ++R M K+V+K PG S+ + K+H F D+S P +IYAK++
Sbjct: 582 SIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLE 641
Query: 478 EIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLR 537
E+ +I GY T V HD+ E K LNYHSE+LA+A+GLI +G PI+V KNLR
Sbjct: 642 ELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLR 701
Query: 538 ICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+C DCH K IS++ REI+VRD RF RFK G CSCGD+W
Sbjct: 702 VCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 191/450 (42%), Gaps = 47/450 (10%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRS-PQKVD 105
L A S A +S F ++ + WN ++ G ++S A+ Y ++ R +
Sbjct: 79 LLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT 138
Query: 106 ALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFD 165
+T LK + S QIH QV++ GF++ YA G + A+KVF
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 166 EMPKR------------------------------DIASWNAMISGLAQGSRPNEAIALF 195
+ R D SW AMI GLAQ EAI F
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 196 KRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKC 255
+ MK +G + + L AC LGA+ +G+ +H I+ ++ V +A+IDMY KC
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 256 GFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAA 315
+ A +VF M K++++W M++ + G +A+ + M G+ PD + A
Sbjct: 319 KCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 316 LCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY----GSVVDLLGRAGRIKEAYDTINSMP 371
+ AC + +EEG + G + + HY S+V L G+ G I ++ N M
Sbjct: 378 ISACANVSSLEEGSQF----HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 372 MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKR 431
+ D V W +++ A +G K+V+ G D V L+ V +A R V++
Sbjct: 434 -VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKP--DGVTLTGVISACSRAGLVEK 490
Query: 432 VRE--AMITKDVRKVPGFSYTEIDCKIHKF 459
+ ++T + VP S C I F
Sbjct: 491 GQRYFKLMTSEYGIVP--SIGHYSCMIDLF 518
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 130/267 (48%), Gaps = 6/267 (2%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L +A +F R++ + W A++ G + + +A+ + + RS D T A+
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
CA + E +Q H + + G Y K GD+D + ++F+EM RD SW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
AM+S AQ R E I LF +M + G +P+ VT+ G +SACS+ G +++G+ +
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 236 E-KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD---GY 291
E + ++ + +ID++S+ G +++A M I W T++ A G+ G
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Query: 292 KALDLLDQMALDGVHPDAVSYLAALCA 318
A + L + LD HP + L+++ A
Sbjct: 561 WAAESL--IELDPHHPAGYTLLSSIYA 585
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/431 (42%), Positives = 281/431 (65%), Gaps = 2/431 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y K G+L++A+++F EMP RD SW+ MI G+A NE+ F+ ++ G PN+V++
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
G LSACSQ G+ + G+I+HG++ V V NA+IDMYS+CG V A VF+ M
Sbjct: 273 TGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+ +++W +MI AM+G G +A+ L ++M GV PD +S+++ L AC+HAGL+EEG
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 331 LFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
F MK ++P ++HYG +VDL GR+G++++AYD I MP+ P ++W++LLGA ++
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH 452
Query: 390 GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
GN+E+AE ++L E+ N+ GD VLLSN YA +W DV +R++MI + ++K +S
Sbjct: 453 GNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSL 512
Query: 450 TEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIK-AYGYTAKTDLVLHDIGEEDKDNAL 508
E+ ++KF G++ E + K+ EI R+K GYT + L+D+ EE+K++ +
Sbjct: 513 VEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQV 572
Query: 509 NYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRF 568
+ HSEKLA+A+ L G I+++KNLRIC DCH V+K+ S +Y EI+VRDR RF F
Sbjct: 573 SKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSF 632
Query: 569 KGGVCSCGDYW 579
K G CSC DYW
Sbjct: 633 KDGSCSCRDYW 643
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 118/242 (48%), Gaps = 8/242 (3%)
Query: 53 AADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFA 112
A +L A +IF + + W+ ++ G+A + ++ ++R + R+ + ++ +
Sbjct: 216 AGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGV 275
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEM-PKRD 171
L C+++ +F +H V + G+ Y++ G++ A+ VF+ M KR
Sbjct: 276 LSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC 335
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
I SW +MI+GLA + EA+ LF M G P+ ++ + L ACS G +++GE
Sbjct: 336 IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE---D 392
Query: 232 YIVDEK----LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
Y + K ++ + ++D+Y + G + KAY M + I W T++ A + +
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH 452
Query: 288 GD 289
G+
Sbjct: 453 GN 454
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 117/278 (42%), Gaps = 15/278 (5%)
Query: 126 TQIHSQVLRFGFDAXXXXXXXXXXXYAKT--GDLDAAQKVFDEMPKRDIASWNAMISGLA 183
TQIH +++G D A + L A+++ P+ D +N ++ G +
Sbjct: 22 TQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYS 81
Query: 184 QGSRPNEAIALFKRMKEEGW-RPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNV 242
+ P+ ++A+F M +G+ P+ + + A +L+ G +H + L+ ++
Sbjct: 82 ESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHL 141
Query: 243 IVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMAL 302
V +I MY CG V+ A VF M +L+ WN +I A D A ++ D+M +
Sbjct: 142 FVGTTLIGMYGGCGCVEFARKVFDEMH-QPNLVAWNAVITACFRGNDVAGAREIFDKMLV 200
Query: 303 DGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKE 362
+ S+ L AG +E R+F M + + +++ + G E
Sbjct: 201 R----NHTSWNVMLAGYIKAGELESAKRIFSEMP----HRDDVSWSTMIVGIAHNGSFNE 252
Query: 363 AYDTINSMP---MLPDVVLWQSLLGASKTYGNVEMAEM 397
++ + M P+ V +L A G+ E ++
Sbjct: 253 SFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKI 290
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/520 (36%), Positives = 302/520 (58%), Gaps = 2/520 (0%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARAL 120
++F + +N ++ G A S A+ R + + K D+ T S L + +
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 121 TFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMIS 180
+ +IH V+R G D+ YAK+ ++ +++VF + RD SWN++++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
G Q R NEA+ LF++M +P V + AC+ L L G+ +HGY++
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
N+ + +A++DMYSKCG + A +F M+ ++W +IM A++G G++A+ L ++M
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDE-VSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRAGR 359
GV P+ V+++A L AC+H GLV+E F+ M K + ++HY +V DLLGRAG+
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGK 495
Query: 360 IKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNV 419
++EAY+ I+ M + P +W +LL + + N+E+AE + K+ + S + G +VL+ N+
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNM 555
Query: 420 YAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEI 479
YA+ RW ++ ++R M K +RK P S+ E+ K H F++GD+SHP+ +I + +
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAV 615
Query: 480 KFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRIC 539
+++ GY A T VLHD+ EE K L HSE+LAVA+G+I+T GT I+V KN+RIC
Sbjct: 616 MEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRIC 675
Query: 540 GDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
DCH IK IS I REIIVRD +RF F G CSCGDYW
Sbjct: 676 TDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 183/413 (44%), Gaps = 41/413 (9%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
R S KQL A I T H S + ++ + + L A +F+ +++P W
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLS-HTSASIVISI--YTNLKLLHEALLLFKTLKSPPVLAW 73
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
+V+R ++A++ + + S + D LK C + +H ++R
Sbjct: 74 KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133
Query: 135 FGFDAXXXXXXXXXXXYAK-----------------------TGD-------------LD 158
G D YAK +GD +D
Sbjct: 134 LGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGID 193
Query: 159 AAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACS 218
+ ++VF+ MP++D+ S+N +I+G AQ +A+ + + M +P+ T+ L S
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 219 QLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWN 278
+ + +G+ +HGY++ + +D +V + ++++DMY+K ++ + VF + C + I+WN
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC-RDGISWN 312
Query: 279 TMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS 338
+++ + NG +AL L QM V P AV++ + + AC H + G +L +
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 372
Query: 339 VVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGN 391
N+ ++VD+ + G IK A + M +L D V W +++ +G+
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTAIIMGHALHGH 424
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 136/275 (49%), Gaps = 13/275 (4%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
+ +A + + ++F R+ WN+++ G + + +A+ +R + + K A+ S
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
+ CA T Q+H VLR GF + Y+K G++ AA+K+FD M
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG---- 226
D SW A+I G A +EA++LF+ MK +G +PN V + L+ACS +G + +
Sbjct: 408 DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 467
Query: 227 -EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFA 285
+ Y ++++L+ AV D+ + G +++AY+ M + W+T++ + +
Sbjct: 468 NSMTKVYGLNQELEHYA----AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Query: 286 MNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN 320
+ +K L+L +++A D+ + A + CN
Sbjct: 524 V----HKNLELAEKVAEKIFTVDSENMGAYVLMCN 554
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 135/327 (41%), Gaps = 39/327 (11%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
+K R + S+A Q+H+Q +R Y L A +F + +
Sbjct: 12 IKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPV 70
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
+W ++I S ++A+A F M+ G P+ L +C+ + L+ GE VHG+
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 233 IVDEKLDMNVIVCNAVIDMYSK---------------------------------CGF-- 257
IV +D ++ NA+++MY+K C
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 258 -VDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
+D VF+ M K ++++NT+I +A +G AL ++ +M + PD+ + + L
Sbjct: 191 GIDSVRRVFEVMP-RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 317 CACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDV 376
+ V +G + + + ++ S+VD+ ++ RI+++ + + S D
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS-ERVFSRLYCRDG 308
Query: 377 VLWQSLLGASKTYGNVEMAEMASRKLV 403
+ W SL+ G A R++V
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMV 335
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/561 (34%), Positives = 316/561 (56%), Gaps = 11/561 (1%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQ-NPSTNDWNAVLRGL 81
+QL ++ G RT L+ A S + A ++F+ I + W A++ G
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALM--VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 82 AMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXX 141
+ +A+ + + R + + T S L AL +++H+QV++ ++
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT----ALPVISPSEVHAQVVKTNYERSS 428
Query: 142 XXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEE 201
Y K G ++ A KVF + +DI +W+AM++G AQ AI +F + +
Sbjct: 429 TVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488
Query: 202 GWRPNDVTVLGALSACSQLGA-LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
G +PN+ T L+ C+ A + QG+ HG+ + +LD ++ V +A++ MY+K G ++
Sbjct: 489 GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIES 548
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN 320
A VF+ K L++WN+MI +A +G KALD+ +M V D V+++ AC
Sbjct: 549 AEEVFKRQR-EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT 607
Query: 321 HAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLW 379
HAGLVEEG + FD+M + + P +H +VDL RAG++++A I +MP +W
Sbjct: 608 HAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIW 667
Query: 380 QSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITK 439
+++L A + + E+ +A+ K++ M +VLLSN+YA W + +VR+ M +
Sbjct: 668 RTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNER 727
Query: 440 DVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDI 499
+V+K PG+S+ E+ K + F+ GD+SHP +IY K++++ R+K GY T VL DI
Sbjct: 728 NVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 787
Query: 500 GEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIV 559
+E K+ L HSE+LA+A+GLI+T G+P+ +IKNLR+CGDCH VIK+I+ I REI+V
Sbjct: 788 DDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVV 847
Query: 560 RDRARFGRFKG-GVCSCGDYW 579
RD RF F GVCSCGD+W
Sbjct: 848 RDSNRFHHFSSDGVCSCGDFW 868
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F + + ++L G + + +A + ++ R ++D S LK A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
Q+H Q ++FGF Y K + +KVFDEM +R++ +W +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
ISG A+ S +E + LF RM+ EG +PN T AL ++ G +G VH +V L
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
D + V N++I++Y KCG V KA +F KS++TWN+MI +A NG +AL +
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTE-VKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVD 352
M L+ V S+ + + C A L E +R + + SVVK YG + D
Sbjct: 285 SMRLNYVRLSESSFASVIKLC--ANLKE--LRFTEQLHCSVVK-----YGFLFD 329
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 148/339 (43%), Gaps = 13/339 (3%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARAL 120
++F ++ + W ++ G A + + ++ + + + ++ T + AL A
Sbjct: 149 KVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Query: 121 TFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMIS 180
Q+H+ V++ G D Y K G++ A+ +FD+ + + +WN+MIS
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
G A EA+ +F M+ R ++ + + C+ L L+ E +H +V
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLF 328
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
+ + A++ YSKC + A +F+ + C ++++W MI F N +A+DL +M
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV----VDLLGR 356
GV P+ +Y L A E + VVK N + +V +D +
Sbjct: 389 KRKGVRPNEFTYSVILTALPVISPSE--------VHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
G+++EA + + D+V W ++L G E A
Sbjct: 441 LGKVEEAAKVFSGIDD-KDIVAWSAMLAGYAQTGETEAA 478
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/528 (36%), Positives = 301/528 (57%), Gaps = 3/528 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
LS+A ++F I++ + N WNA++ G A S P ++ + + S D+ T L
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
C++ + ++H ++R + Y G+L Q +FD M + +
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLV 563
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
SWN +I+G Q P+ A+ +F++M G + ++++ ACS L +L+ G H Y
Sbjct: 564 SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ L+ + + ++IDMY+K G + ++ VF + KS +WN MIM + ++G +A
Sbjct: 624 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHGLAKEA 682
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVD 352
+ L ++M G +PD +++L L ACNH+GL+ EG+R D MK S +KPN+KHY V+D
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 742
Query: 353 LLGRAGRIKEAYDTI-NSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCG 411
+LGRAG++ +A + M DV +W+SLL + + + N+EM E + KL E+
Sbjct: 743 MLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE 802
Query: 412 DFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKE 471
++VLLSN+YA +W DV++VR+ M +RK G S+ E++ K+ F+ G++ ++E
Sbjct: 803 NYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEE 862
Query: 472 IYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQ 531
I + ++ +I GY T V HD+ EE+K L HSEKLA+ YGLI T GT I+
Sbjct: 863 IKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIR 922
Query: 532 VIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
V KNLRIC DCH K+IS + REI+VRD RF FK GVCSCGDYW
Sbjct: 923 VYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 142/291 (48%), Gaps = 10/291 (3%)
Query: 42 TKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAI-SWYRSVSRS 100
T+++ + A+ + D S +F +++ + WNAV+ + + + + ++ +S +
Sbjct: 124 TRIITMYAMCGSPDDS--RFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 101 PQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAA 160
D T +K CA +H V++ G Y G + A
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA 241
Query: 161 QKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEE----GWRPNDVTVLGALSA 216
++FD MP+R++ SWN+MI + E+ L M EE + P+ T++ L
Sbjct: 242 LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 217 CSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLIT 276
C++ + G+ VHG+ V +LD +++ NA++DMYSKCG + A +F+ M+ K++++
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVS 360
Query: 277 WNTMIMAFAMNGDGYKALDLLDQMALDG--VHPDAVSYLAALCACNHAGLV 325
WNTM+ F+ GD + D+L QM G V D V+ L A+ C H +
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 164/400 (41%), Gaps = 17/400 (4%)
Query: 38 HPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSV 97
H T L+L I P +L + R + ++ + +L G M A
Sbjct: 235 HGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF------ 288
Query: 98 SRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL 157
D T L CAR +H ++ D Y+K G +
Sbjct: 289 -----MPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 158 DAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW--RPNDVTVLGALS 215
AQ +F +++ SWN M+ G + + + ++M G + ++VT+L A+
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 216 ACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI 275
C L + +H Y + ++ N +V NA + Y+KCG + A VF + +K++
Sbjct: 404 VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR-SKTVN 462
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
+WN +I A + D +LD QM + G+ PD+ + + L AC+ + G + +
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 336 KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ ++ ++ Y SV+ L G + ++M +V W +++ G + A
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVITGYLQNGFPDRA 581
Query: 396 EMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREA 435
R++V G CG + + V+ A ++ REA
Sbjct: 582 LGVFRQMVLYGIQLCG--ISMMPVFGACSLLPSLRLGREA 619
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 37/239 (15%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
+ +TGDLD + + E D +S +A + EA+ L
Sbjct: 53 FCETGDLDKSFRTVQEFVGDDESSSDAFL-------LVREALGLL--------------- 90
Query: 211 LGALSACSQLGALKQGEIVHGYIV-DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
L A + ++ G +H + +L + ++C +I MY+ CG D + VF +
Sbjct: 91 ---LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR 147
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALD-LLDQMALDGVHPDAVSYLAALCACNHAGLVEEG 328
+K+L WN +I +++ N + L+ ++ ++ + PD +Y + AC AG+ + G
Sbjct: 148 -SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVG 204
Query: 329 VRLFDLMKGSVVKPNMKH----YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+ L + G VVK + ++V G G + +A + MP ++V W S++
Sbjct: 205 IGL--AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE-RNLVSWNSMI 260
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/573 (34%), Positives = 311/573 (54%), Gaps = 41/573 (7%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTN----DWNAVLRGLAMSPQPTQAISWYRSVSRSPQ 102
LCA + L +I +++ WN +L G S +A+ ++ +
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF 248
Query: 103 KVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL----- 157
D +T S L + + IH V++ G Y K+G +
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIIS 308
Query: 158 --------------------------DAAQKVFDEMPKR----DIASWNAMISGLAQGSR 187
D A ++F+ ++ ++ SW ++I+G AQ +
Sbjct: 309 LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNA 247
EA+ LF+ M+ G +PN VT+ L AC + AL G HG+ V L NV V +A
Sbjct: 369 DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
+IDMY+KCG ++ + VF NM TK+L+ WN+++ F+M+G + + + + + + P
Sbjct: 429 LIDMYAKCGRINLSQIVF-NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 308 DAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDT 366
D +S+ + L AC GL +EG + F +M +KP ++HY +V+LLGRAG+++EAYD
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547
Query: 367 INSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRW 426
I MP PD +W +LL + + NV++AE+A+ KL + + G +VLLSN+YAA+ W
Sbjct: 548 IKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMW 607
Query: 427 HDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAY 486
+V +R M + ++K PG S+ ++ +++ + GD+SHP +I KMDEI ++
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
Query: 487 GYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVI 546
G+ D LHD+ E++++ L HSEKLAV +GL++T +GTP+QVIKNLRICGDCH VI
Sbjct: 668 GHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVI 727
Query: 547 KIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
K IS+ REI +RD RF FK G+CSCGD+W
Sbjct: 728 KFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 133/319 (41%), Gaps = 71/319 (22%)
Query: 106 ALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFD 165
AL C++A KGC E +I S++ G +A
Sbjct: 187 ALLCAYARKGC-----LEEVVRILSEMESSGIEA-------------------------- 215
Query: 166 EMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ 225
+I SWN ++SG + EA+ +F+++ G+ P+ VTV L + L
Sbjct: 216 -----NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 226 GEIVHGYIVDEKLDMNVIVCNAVIDMYSKC------------------------------ 255
G ++HGY++ + L + V +A+IDMY K
Sbjct: 271 GRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 256 -GFVDKA---YSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVS 311
G VDKA + +F+ + ++++W ++I A NG +AL+L +M + GV P+ V+
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 312 YLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP 371
+ L AC + + G + N+ +++D+ + GRI + N MP
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 372 MLPDVVLWQSLLGASKTYG 390
++V W SL+ +G
Sbjct: 451 T-KNLVCWNSLMNGFSMHG 468
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 6/246 (2%)
Query: 124 EATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLA 183
+ TQ H+++L+ G Y+ + A V +P I S++++I L
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 184 QGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVI 243
+ ++I +F RM G P+ + C++L A K G+ +H LDM+
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALD 303
V ++ MY +CG + A VF MS K ++T + ++ A+A G + + +L +M
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMS-DKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 304 GVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRA-----G 358
G+ + VS+ L N +G +E V +F + P+ SV+ +G + G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 359 RIKEAY 364
R+ Y
Sbjct: 272 RLIHGY 277
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/431 (44%), Positives = 272/431 (63%), Gaps = 3/431 (0%)
Query: 151 YAKTGDLDAAQKVFDEMP-KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVT 209
Y K ++ A+ +F +M +++ +WNAMISG + SRP + + LF+ M EEG RPN
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
+ AL CS+L AL+ G +H + L +V ++I MY KCG + A+ +F+ M
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
K ++ WN MI +A +G+ KAL L +M + + PD ++++A L ACNHAGLV G+
Sbjct: 347 -KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGM 405
Query: 330 RLFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKT 388
F+ M + V+P HY +VDLLGRAG+++EA I SMP P ++ +LLGA +
Sbjct: 406 AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRV 465
Query: 389 YGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
+ NVE+AE A+ KL+++ S + +V L+N+YA++ RW DV RVR+ M +V KVPG+S
Sbjct: 466 HKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYS 525
Query: 449 YTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNAL 508
+ EI K+H F + D+ HP I+ K+ E++ ++K GY + + LH++ EE K+ L
Sbjct: 526 WIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLL 585
Query: 509 NYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRF 568
+HSEKLAVA+G I G+ IQV KNLRICGDCH IK IS I REIIVRD RF F
Sbjct: 586 LWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHF 645
Query: 569 KGGVCSCGDYW 579
K G CSCGDYW
Sbjct: 646 KDGSCSCGDYW 656
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 124/254 (48%), Gaps = 9/254 (3%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y + + + AQ FD MP +D ASWN MI+G A+ +A LF M E+ N+V+
Sbjct: 134 YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSW 189
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+S + G L++ H + V V+ A+I Y K V+ A ++F++M+
Sbjct: 190 NAMISGYIECGDLEKAS--HFFKVAPV--RGVVAWTAMITGYMKAKKVELAEAMFKDMTV 245
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
K+L+TWN MI + N L L M +G+ P++ +AL C+ ++ G +
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQ 305
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ ++ S + ++ S++ + + G + +A+ M DVV W +++ +G
Sbjct: 306 IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK-KDVVAWNAMISGYAQHG 364
Query: 391 NVEMAEMASRKLVE 404
N + A R++++
Sbjct: 365 NADKALCLFREMID 378
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 10/237 (4%)
Query: 53 AADLSFAAQIFRRIQ-NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSF 111
A + A +F+ + N + WNA++ G + +P + +R++ + ++ S
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 112 ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD 171
AL GC+ QIH V + Y K G+L A K+F+ M K+D
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG----- 226
+ +WNAMISG AQ ++A+ LF+ M + RP+ +T + L AC+ G + G
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 227 EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
+V Y V+ + D ++D+ + G +++A + ++M + T++ A
Sbjct: 410 SMVRDYKVEPQPDHYT----CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGA 462
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/527 (37%), Positives = 293/527 (55%), Gaps = 5/527 (0%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQ-KVDALTCSFALK 114
L A ++F + + W A++ G QP +A+ Y + R P + + T S A+
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVA 226
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
A +IH ++R G D+ Y K G +D A+ +FD++ ++D+ S
Sbjct: 227 AAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVS 286
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
W +MI + SR E +LF + RPN+ T G L+AC+ L + G+ VHGY+
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT 346
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK-SLITWNTMIMAFAMNGDGYKA 293
D ++++DMY+KCG ++ A V C K L++W ++I A NG +A
Sbjct: 347 RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDG--CPKPDLVSWTSLIGGCAQNGQPDEA 404
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF-DLMKGSVVKPNMKHYGSVVD 352
L D + G PD V+++ L AC HAGLVE+G+ F + + + HY +VD
Sbjct: 405 LKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGD 412
LL R+GR ++ I+ MPM P LW S+LG TYGN+++AE A+++L ++ +
Sbjct: 465 LLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVT 524
Query: 413 FVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEI 472
+V ++N+YAA +W + ++R+ M V K PG S+TEI K H FI D SHP + +I
Sbjct: 525 YVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQI 584
Query: 473 YAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQV 532
+ E++ ++K GY T LVLHD+ +E K+ L YHSEKLAVA+ ++ST GT I+V
Sbjct: 585 VEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKV 644
Query: 533 IKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
KNLR C DCH IK ISNI R+I VRD RF F+ G CSCGDYW
Sbjct: 645 FKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 158/353 (44%), Gaps = 36/353 (10%)
Query: 102 QKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQ 161
+K A T ++ C++ E ++H + GF YAK G L A+
Sbjct: 81 KKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDAR 140
Query: 162 KVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEE---GW--------------- 203
KVFDEMP RD+ SWN M++G A+ EA LF M E+ W
Sbjct: 141 KVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEE 200
Query: 204 --------------RPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
RPN TV A++A + + +++G+ +HG+IV LD + ++ ++++
Sbjct: 201 ALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLM 260
Query: 250 DMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDA 309
DMY KCG +D+A ++F + K +++W +MI + + + L ++ P+
Sbjct: 261 DMYGKCGCIDEARNIFDKI-VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNE 319
Query: 310 VSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINS 369
++ L AC E G ++ M P S+VD+ + G I+ A ++
Sbjct: 320 YTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDG 379
Query: 370 MPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAA 422
P PD+V W SL+G G + A L++ G+ D V NV +A
Sbjct: 380 CPK-PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKP--DHVTFVNVLSA 429
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/497 (38%), Positives = 298/497 (59%), Gaps = 9/497 (1%)
Query: 91 ISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQV--LRFGFDAXXXXXXXXX 148
+S R V + D ++ + + G A+ F +A ++ ++ ++ DA
Sbjct: 191 LSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA 250
Query: 149 XXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDV 208
T ++ + +F +M K+ + SWN MI + + P EA+ L+ RM+ +G+ P+ V
Sbjct: 251 VSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 209 TVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
++ L AC AL G+ +HGYI +KL N+++ NA+IDMY+KCG ++KA VF+NM
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 269 SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG 328
++ +++W MI A+ +G G A+ L ++ G+ PD+++++ L AC+HAGL+EEG
Sbjct: 371 K-SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 329 VRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASK 387
F LM + P ++H +VDLLGRAG++KEAY I M M P+ +W +LLGA +
Sbjct: 430 RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACR 489
Query: 388 TYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGF 447
+ + ++ +A+ KL ++ G +VLLSN+YA RW +V +R M +K ++K PG
Sbjct: 490 VHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA 549
Query: 448 SYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNA 507
S E++ IH F+ GD+SHP EIY ++D + ++K GY ++ LHD+ EEDK+
Sbjct: 550 SNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETH 609
Query: 508 LNYHSEKLAVAYGLISTV-----NGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDR 562
L HSEKLA+ + L++T + I++ KNLRICGDCH K+IS I +REII+RD
Sbjct: 610 LAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDT 669
Query: 563 ARFGRFKGGVCSCGDYW 579
RF F+ GVCSCGDYW
Sbjct: 670 NRFHVFRFGVCSCGDYW 686
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 134/305 (43%), Gaps = 10/305 (3%)
Query: 44 LLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQK 103
LL + + ++ + +F ++ S WN ++ + P +A+ Y + +
Sbjct: 247 LLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFE 306
Query: 104 VDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKV 163
DA++ + L C S +IH + R YAK G L+ A+ V
Sbjct: 307 PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDV 366
Query: 164 FDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGAL 223
F+ M RD+ SW AMIS R +A+ALF ++++ G P+ + + L+ACS G L
Sbjct: 367 FENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLL 426
Query: 224 KQGEIVHGYIVDE-KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
++G + D K+ + ++D+ + G V +AY Q+MS + W ++
Sbjct: 427 EEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLG 486
Query: 283 AFAMNGD---GYKALDLLDQMALDGVHPDAVSYLAALCAC-NHAGLVEEGVRLFDLMKGS 338
A ++ D G A D L Q+A P+ Y L AG EE + ++MK
Sbjct: 487 ACRVHSDTDIGLLAADKLFQLA-----PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK 541
Query: 339 VVKPN 343
+K N
Sbjct: 542 GLKKN 546
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 144/337 (42%), Gaps = 35/337 (10%)
Query: 49 AISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALT 108
A + D++ A ++F I + N ++R + + + + ++ + D T
Sbjct: 83 AYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYT 142
Query: 109 CSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP 168
LK C+ + T +IH + G + Y K G L A+ V DEM
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 202
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
+RD+ SWN+++ G AQ R ++A+ + + M+ + T+ L A S
Sbjct: 203 RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT------ 256
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG 288
NV+ V DM+ K G KSL++WN MI + N
Sbjct: 257 -----------ENVMY---VKDMFFKMG--------------KKSLVSWNVMIGVYMKNA 288
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG 348
+A++L +M DG PDAVS + L AC + G ++ ++ + PN+
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348
Query: 349 SVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+++D+ + G +++A D +M DVV W +++ A
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKS-RDVVSWTAMISA 384
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 138/325 (42%), Gaps = 21/325 (6%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
+HS+++ YA D+ +A+KVFDE+P+R++ N MI
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNA 247
E + +F M RP+ T L ACS G + G +HG L + V N
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
++ MY KCGF+ +A V MS + +++WN++++ +A N AL++ +M +
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239
Query: 308 DA---VSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPN------MKHYGSV--VDLLGR 356
DA S L A+ ++ F + K S+V N MK+ V V+L R
Sbjct: 240 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLL 416
D ++ +LP +L K +G +E ++ L+E L
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA---------L 350
Query: 417 SNVYAARQRWHDVKRVREAMITKDV 441
++YA + V E M ++DV
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDV 375
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 299/538 (55%), Gaps = 18/538 (3%)
Query: 59 AAQIFRRIQNPSTN----DWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
A ++F ++Q W+A + G A +A+ R + S K + +T L
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 115 GCARALTFSEATQIHSQVLRFGFDA-------XXXXXXXXXXXYAKTGDLDAAQKVFDEM 167
GCA +IH +++ D YAK +D A+ +FD +
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 168 -PK-RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW--RPNDVTVLGALSACSQLGAL 223
PK RD+ +W MI G +Q N+A+ L M EE RPN T+ AL AC+ L AL
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 224 KQGEIVHGYIV-DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
+ G+ +H Y + +++ + + V N +IDMY+KCG + A VF NM K+ +TW +++
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMM-AKNEVTWTSLMT 552
Query: 283 AFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VK 341
+ M+G G +AL + D+M G D V+ L L AC+H+G++++G+ F+ MK V
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRK 401
P +HY +VDLLGRAGR+ A I MPM P V+W + L + +G VE+ E A+ K
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEK 672
Query: 402 LVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFIN 461
+ E+ SN G + LLSN+YA RW DV R+R M K V+K PG S+ E F
Sbjct: 673 ITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV 732
Query: 462 GDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGL 521
GD++HP+ KEIY + + RIK GY +T LHD+ +E+KD+ L HSEKLA+AYG+
Sbjct: 733 GDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGI 792
Query: 522 ISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
++T G I++ KNLR+CGDCHT +S I + +II+RD +RF FK G CSC YW
Sbjct: 793 LTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 192/446 (43%), Gaps = 61/446 (13%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRI--QNPSTN 72
+C ++ +K + L++ G + + + ++ LS A + RR +
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGC---LSHAVSLLRRFPPSDAGVY 93
Query: 73 DWNAVLRGLAMSPQPTQAISWY---RSVSRSPQKVDALTCSFALKGCARALTFSEATQIH 129
WN+++R + + + + S+S +P D T F K C + H
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTP---DNYTFPFVFKACGEISSVRCGESAH 150
Query: 130 SQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPN 189
+ L GF + Y++ L A+KVFDEM D+ SWN++I A+ +P
Sbjct: 151 ALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 190 EAIALFKRMKEE-GWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAV 248
A+ +F RM E G RP+++T++ L C+ LG G+ +H + V ++ N+ V N +
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 249 IDMYSKCGFVDKAYSVFQNMSCTKSLITWNTM---------------------------- 280
+DMY+KCG +D+A +VF NMS K +++WN M
Sbjct: 271 VDMYAKCGMMDEANTVFSNMS-VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 281 -------IMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRL-- 331
I +A G GY+AL + QM G+ P+ V+ ++ L C G + G +
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 332 ------FDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM-PMLPDVVLWQSLLG 384
DL K NM ++D+ + ++ A +S+ P DVV W ++G
Sbjct: 390 YAIKYPIDLRKNGHGDENMV-INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 385 ASKTYGNVEMAEMASRKLVEMGSNSC 410
+G+ A A L EM C
Sbjct: 449 GYSQHGD---ANKALELLSEMFEEDC 471
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/529 (37%), Positives = 298/529 (56%), Gaps = 3/529 (0%)
Query: 53 AADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFA 112
A DL A ++F + + WNA++ GL + +S +R + D T
Sbjct: 38 AGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSV 97
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
G A + S QIH +++G + Y + G L + V MP R++
Sbjct: 98 FSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNL 157
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
+WN +I G AQ P + L+K MK G RPN +T + LS+CS L QG+ +H
Sbjct: 158 VAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAE 217
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
+ V V +++I MYSKCG + A F + + W++MI A+ +G G +
Sbjct: 218 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDE 276
Query: 293 ALDLLDQMALD-GVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSV 350
A++L + MA + + V++L L AC+H+GL ++G+ LFD+M + KP +KHY V
Sbjct: 277 AIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV 336
Query: 351 VDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSC 410
VDLLGRAG + +A I SMP+ D+V+W++LL A + N EMA+ ++++++ N
Sbjct: 337 VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDS 396
Query: 411 GDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWK 470
+VLL+NV+A+ +RW DV VR++M K+V+K G S+ E ++H+F GD+S K
Sbjct: 397 ACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSK 456
Query: 471 EIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPI 530
EIY+ + E+ +K GY T VLHD+ EE+K++ L HSEKLAVA+ L+ G PI
Sbjct: 457 EIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPI 516
Query: 531 QVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
++IKNLR+C DCH K IS I NREI +RD +RF F G CSCGDYW
Sbjct: 517 RIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 2/271 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y + GDL A+KVFDEMP R + +WNAMI+GL Q E ++LF+ M G+ P++ T+
Sbjct: 35 YVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 94
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
S + L ++ G+ +HGY + L+++++V +++ MY + G + V ++M
Sbjct: 95 GSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMP- 153
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
++L+ WNT+IM A NG L L M + G P+ ++++ L +C+ + +G +
Sbjct: 154 VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 213
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ + S++ + + G + +A + D V+W S++ A +G
Sbjct: 214 IHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED-EDEVMWSSMISAYGFHG 272
Query: 391 NVEMAEMASRKLVEMGSNSCGDFVLLSNVYA 421
+ A + E + + L+ +YA
Sbjct: 273 QGDEAIELFNTMAEQTNMEINEVAFLNLLYA 303
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/564 (36%), Positives = 317/564 (56%), Gaps = 20/564 (3%)
Query: 23 KQLQAHLITTGKFHFHP-SRTKLLEL-CAISPAADLSFAAQIFRRIQNPSTND----WNA 76
+QL H +T G P T L+ + C AD A ++F +NP ++ +NA
Sbjct: 73 QQLHCH-VTKGGCETEPFVLTALISMYCKCGLVAD---ARKVFE--ENPQSSQLSVCYNA 126
Query: 77 VLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFG 136
++ G + + T A +R + + VD++T + C +H Q ++ G
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 137 FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFK 196
D+ Y K G ++A +++FDEMP + + +WNA+ISG +Q + + L++
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 197 RMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCG 256
+MK G P+ T++ LS+C+ LGA K G V + NV V NA I MY++CG
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG 306
Query: 257 FVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
+ KA +VF M KSL++W MI + M+G G L L D M G+ PD ++ L
Sbjct: 307 NLAKARAVFDIMP-VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVL 365
Query: 317 CACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPD 375
AC+H+GL ++G+ LF MK ++P +HY +VDLLGRAGR+ EA + I SMP+ PD
Sbjct: 366 SACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPD 425
Query: 376 VVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREA 435
+W +LLGA K + NV+MAE+A K++E N+ G +VL+SN+Y+ + + R+R
Sbjct: 426 GAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVM 485
Query: 436 MITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLV 495
M + RK PG+SY E ++H F+ GD+SH +E++ +DE++ + D
Sbjct: 486 MRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDR- 544
Query: 496 LHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNR 555
GEE + HSE+LA+A+G+++++ GT I VIKNLR+C DCH +K +S I +R
Sbjct: 545 ----GEE-VSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDR 599
Query: 556 EIIVRDRARFGRFKGGVCSCGDYW 579
+ +VRD +RF FK GVCSC DYW
Sbjct: 600 QFVVRDASRFHYFKDGVCSCKDYW 623
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 4/339 (1%)
Query: 70 STNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIH 129
++ WN LR LA +++IS YRS+ RS DA + F LK CA Q+H
Sbjct: 17 ASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLH 76
Query: 130 SQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS--WNAMISGLAQGSR 187
V + G + Y K G + A+KVF+E P+ S +NA+ISG S+
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNA 247
+A +F+RMKE G + VT+LG + C+ L G +HG V LD V V N+
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
I MY KCG V+ +F M K LITWN +I ++ NG Y L+L +QM GV P
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMP-VKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255
Query: 308 DAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTI 367
D + ++ L +C H G + G + L++ + PN+ + + + R G + +A
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 368 NSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ MP + +V W +++G +G E+ M +++ G
Sbjct: 316 DIMP-VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG 353
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/431 (42%), Positives = 277/431 (64%), Gaps = 4/431 (0%)
Query: 152 AKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVL 211
+ G++ A++VFD M +R+ ASW +I + EA+ LF M+++G RP T++
Sbjct: 276 GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI 335
Query: 212 GALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCT 271
LS C+ L +L G+ VH +V + D++V V + ++ MY KCG + K+ +F +
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP-S 394
Query: 272 KSLITWNTMIMAFAMNGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEGVR 330
K +I WN++I +A +G G +AL + +M L G P+ V+++A L AC++AG+VEEG++
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLK 454
Query: 331 LFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
+++ M+ VKP HY +VD+LGRAGR EA + I+SM + PD +W SLLGA +T+
Sbjct: 455 IYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Query: 390 GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
+++AE ++KL+E+ + G ++LLSN+YA++ RW DV +R+ M T+ VRK PG S+
Sbjct: 515 SQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSW 574
Query: 450 TEIDCKIHKFINGD-QSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNAL 508
TE++ K+H F G SHP + I +DE+ ++ GY LHD+ EE+K N+L
Sbjct: 575 TEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSL 634
Query: 509 NYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRF 568
YHSE+LAVAY L+ G PI+V+KNLR+C DCHT IKIIS + REII+RD RF F
Sbjct: 635 KYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHF 694
Query: 569 KGGVCSCGDYW 579
+ G CSC DYW
Sbjct: 695 RNGECSCKDYW 705
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 18/240 (7%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y K G++D A+KVFD MP+R++ SW A++ G + + A +LF +M E+ V +
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVML 148
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+G L A K E++ D + I ++I K G VD+A +F MS
Sbjct: 149 IGFLQDGRIDDACKLYEMIP--------DKDNIARTSMIHGLCKEGRVDEAREIFDEMS- 199
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+S+ITW TM+ + N A + D M VS+ + L G +E+
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEE 255
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
LF++M VKP + +++ LG+ G I +A +SM D WQ+++ + G
Sbjct: 256 LFEVMP---VKPVIA-CNAMISGLGQKGEIAKARRVFDSMKERNDAS-WQTVIKIHERNG 310
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 110/240 (45%), Gaps = 4/240 (1%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA 106
+ + +++ A ++F ++ + W V++ + +A+ + + + +
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 107 LTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE 166
T L CA + Q+H+Q++R FD Y K G+L ++ +FD
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 167 MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG-WRPNDVTVLGALSACSQLGALKQ 225
P +DI WN++ISG A EA+ +F M G +PN+VT + LSACS G +++
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 226 GEIVHGYIVDEKLDMNVIVCN--AVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
G ++ + + + I + ++DM + G ++A + +M+ W +++ A
Sbjct: 452 GLKIYESM-ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 22/247 (8%)
Query: 152 AKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVL 211
++ G + A+K+FD + I+SWN+M++G P +A LF M + N ++
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR----NIISWN 83
Query: 212 GALSACSQLGALKQGEIVHGY-IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
G +S G +K GEI + D + NV+ A++ Y G VD A S+F M
Sbjct: 84 GLVS-----GYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP- 137
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
K+ ++W M++ F +G A L +M D + S + LC G V+E
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPDKDNIARTSMIHGLC---KEGRVDEARE 193
Query: 331 LFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
+FD M + SV+ + ++V G+ R+ +A + MP +V W S+L
Sbjct: 194 IFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WTSMLMGYVQN 247
Query: 390 GNVEMAE 396
G +E AE
Sbjct: 248 GRIEDAE 254
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/526 (36%), Positives = 302/526 (57%), Gaps = 8/526 (1%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQ-PTQAISWYRS-VSRSPQKVDALTCSFALKGCAR 118
++F R+++ S W A++ G + T+AI+ + +++ + + T S A K C
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
Q+ Q + G + + K+ ++ AQ+ F+ + ++++ S+N
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
+ G + +A L + E + T LS + +G++++GE +H +V L
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
N VCNA+I MYSKCG +D A VF M +++I+W +MI FA +G + L+ +
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRA 357
QM +GV P+ V+Y+A L AC+H GLV EG R F+ M + +KP M+HY +VDLL RA
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLS 417
G + +A++ IN+MP DV++W++ LGA + + N E+ ++A+RK++E+ N ++ LS
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLS 684
Query: 418 NVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMD 477
N+YA +W + +R M +++ K G S+ E+ KIHKF GD +HPN +IY ++D
Sbjct: 685 NIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELD 744
Query: 478 EIKFRIKAYGYTAKTDLVLHDIGEEDKDNA----LNYHSEKLAVAYGLISTVNGTPIQVI 533
+ IK GY TDLVLH + EE+ + L HSEK+AVA+GLIST P++V
Sbjct: 745 RLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVF 804
Query: 534 KNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
KNLR+CGDCH +K IS + REI++RD RF FK G CSC DYW
Sbjct: 805 KNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 122/280 (43%), Gaps = 4/280 (1%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A + F + + +N L G + QA ++ V A T + L G A
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+ + QIHSQV++ G Y+K G +D A +VF+ M R++ SW +M
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-EIVHGYIVDEK 237
I+G A+ + F +M EEG +PN+VT + LSACS +G + +G + D K
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG-YKALDL 296
+ + ++D+ + G + A+ M ++ W T + A ++ + L
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAA 666
Query: 297 LDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMK 336
+ LD P A L+ + AC AG EE + MK
Sbjct: 667 RKILELDPNEPAAYIQLSNIYAC--AGKWEESTEMRRKMK 704
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 142/335 (42%), Gaps = 5/335 (1%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F ++ + W ++ P +AI ++ + S + D T S CA
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 119 ALTFSEATQIHSQVLRFGF-DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
S Q+HS +R G D + G +D +KVFD M + SW A
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTA 341
Query: 178 MISGLAQGSR-PNEAIALFKRMKEEGW-RPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
+I+G + EAI LF M +G PN T A AC L + G+ V G
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
L N V N+VI M+ K ++ A F+++S K+L+++NT + N + +A
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLG 355
LL ++ + A ++ + L + G + +G ++ + + N +++ +
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ G I A N M +V+ W S++ +G
Sbjct: 521 KCGSIDTASRVFNFMEN-RNVISWTSMITGFAKHG 554
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 6/223 (2%)
Query: 102 QKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQ 161
+ +D++T S LK C RA F +H++++ F + Y+K+GD A+
Sbjct: 58 RPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE 117
Query: 162 KVFDEMP---KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACS 218
VF+ M KRD+ SW+AM++ R +AI +F E G PND + ACS
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 219 QLGALKQGEIVHGYIVDE-KLDMNVIVCNAVIDMYSKC-GFVDKAYSVFQNMSCTKSLIT 276
+ G + G+++ + +V V ++IDM+ K + AY VF MS +++T
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVT 236
Query: 277 WNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
W MI G +A+ M L G D + + AC
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/431 (43%), Positives = 274/431 (63%), Gaps = 3/431 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMK-EEGWRPNDVT 209
Y + G++DAA + F+ MP+++I SWN +ISGL QGS EAI +F M+ +EG + VT
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
++ SAC LGAL + ++ YI + ++V + ++DM+S+CG + A S+F +++
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
+ + W I A AM G+ +A++L D M G+ PD V+++ AL AC+H GLV++G
Sbjct: 533 -NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 330 RLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKT 388
+F ++K V P HYG +VDLLGRAG ++EA I MPM P+ V+W SLL A +
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 389 YGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
GNVEMA A+ K+ + G +VLLSNVYA+ RW+D+ +VR +M K +RK PG S
Sbjct: 652 QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Query: 449 YTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNAL 508
+I K H+F +GD+SHP I A +DE+ R G+ VL D+ E++K L
Sbjct: 712 SIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFML 771
Query: 509 NYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRF 568
+ HSEKLA+AYGLIS+ GT I+++KNLR+C DCH+ K S +YNREII+RD RF
Sbjct: 772 SRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYI 831
Query: 569 KGGVCSCGDYW 579
+ G CSCGD+W
Sbjct: 832 RQGKCSCGDFW 842
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 194/402 (48%), Gaps = 36/402 (8%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLL-ELCAISPAADLSFAAQIFRRIQNPSTN-D 73
C ++ +K L G + + TKL+ C + LSFA ++F ++ T
Sbjct: 42 CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+N+++RG A S +AI + + S D T F L CA++ QIH ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ G+ YA+ G+LD+A+KVFDEM +R++ SW +MI G A+ +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 194 LFKRM-KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMY 252
LF RM ++E PN VT++ +SAC++L L+ GE V+ +I + +++N ++ +A++DMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
KC +D A +F + +L N M + G +AL + + M GV PD +S
Sbjct: 282 MKCNAIDVAKRLFDEYGAS-NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 313 LAALCACN-----------HAGLVEEGVRLFDLMKGSVVKPNMK---------------- 345
L+A+ +C+ H ++ G +D + +++ MK
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 346 ----HYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+ S+V G + A++T +MP ++V W +++
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPE-KNIVSWNTII 441
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 174/386 (45%), Gaps = 35/386 (9%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAIS-WYRSVSRSPQKVDALTCSFA 112
+L A ++F + + W +++ G A A+ ++R V +++T
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
+ CA+ ++++ + G + Y K +D A+++FDE ++
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
NAM S + EA+ +F M + G RP+ +++L A+S+CSQL + G+ HGY
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
++ + +CNA+IDMY KC D A+ +F MS K+++TWN+++ + NG+
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDA 421
Query: 293 ALDLLDQM--------------------------------ALDGVHPDAVSYLAALCACN 320
A + + M + +GV+ D V+ ++ AC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 321 HAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQ 380
H G ++ ++ ++ + ++ +++ ++VD+ R G + A NS+ DV W
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWT 540
Query: 381 SLLGASKTYGNVEMAEMASRKLVEMG 406
+ +GA GN E A ++E G
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQG 566
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 2/233 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSV-SRSPQKVDALTCSFALKGCA 117
A + F + + WN ++ GL +AI + S+ S+ D +T C
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
A I+ + + G +++ GD ++A +F+ + RD+++W A
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-EIVHGYIVDE 236
I +A AI LF M E+G +P+ V +GAL+ACS G ++QG EI + +
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
+ + ++D+ + G +++A + ++M + + WN+++ A + G+
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/525 (36%), Positives = 300/525 (57%), Gaps = 7/525 (1%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L+ A Q+F ++ + W ++ + +A+ + R + + T S L+
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
C S+ +H +++ G ++ +AK G+ + A VFDEM D W
Sbjct: 172 CN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
N++I G AQ SR + A+ LFKRMK G+ T+ L AC+ L L+ G H +IV
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV- 287
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
K D ++I+ NA++DMY KCG ++ A VF M + +ITW+TMI A NG +AL
Sbjct: 288 -KYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQEALK 345
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLL 354
L ++M G P+ ++ + L AC+HAGL+E+G F MK + P +HYG ++DLL
Sbjct: 346 LFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLL 405
Query: 355 GRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFV 414
G+AG++ +A +N M PD V W++LLGA + N+ +AE A++K++ + G +
Sbjct: 406 GKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYT 465
Query: 415 LLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYA 474
LLSN+YA Q+W V+ +R M + ++K PG S+ E++ +IH FI GD SHP E+
Sbjct: 466 LLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSK 525
Query: 475 KMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIK 534
K++++ R+ GY +T+ VL D+ E +++L +HSEKLA+A+GL++ I++ K
Sbjct: 526 KLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRK 585
Query: 535 NLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
NLRICGDCH K+ S + R I++RD R+ F+ G CSCGDYW
Sbjct: 586 NLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 11/288 (3%)
Query: 105 DALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVF 164
D+ T S +K C E I + G Y K L+ A ++F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 165 DEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALK 224
D+MP+R++ SW MIS ++ +A+ L M + RPN T L +C+ + ++
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 225 QGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAF 284
++H I+ E L+ +V V +A+ID+++K G + A SVF M T I WN++I F
Sbjct: 180 ---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGF 235
Query: 285 AMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVK--P 342
A N AL+L +M G + + + L AC L+E G++ +VK
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ----AHVHIVKYDQ 291
Query: 343 NMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
++ ++VD+ + G +++A N M DV+ W +++ G
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKE-RDVITWSTMISGLAQNG 338
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 311/533 (58%), Gaps = 7/533 (1%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S DL A +FR + + S + +++ G A +A+ + + D T +
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 111 FALKGCARALTFSEATQIHSQVLR--FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP 168
L CAR E ++H + GFD YAK G + A+ VF EM
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG-WRPNDVTVLGALSACSQLGALKQGE 227
+DI SWN +I G ++ NEA++LF + EE + P++ TV L AC+ L A +G
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
+HGYI+ + V N+++DMY+KCG + A+ +F +++ +K L++W MI + M+
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMH 578
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKH 346
G G +A+ L +QM G+ D +S+++ L AC+H+GLV+EG R F++M+ ++P ++H
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638
Query: 347 YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
Y +VD+L R G + +AY I +MP+ PD +W +LL + + +V++AE + K+ E+
Sbjct: 639 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Query: 407 SNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSH 466
+ G +VL++N+YA ++W VKR+R+ + + +RK PG S+ EI +++ F+ GD S+
Sbjct: 699 PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSN 758
Query: 467 PNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVN 526
P + I A + +++ R+ GY+ T L D E +K+ AL HSEKLA+A G+IS+ +
Sbjct: 759 PETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGH 818
Query: 527 GTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
G I+V KNLR+CGDCH + K +S + REI++RD RF +FK G CSC +W
Sbjct: 819 GKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 169/332 (50%), Gaps = 2/332 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
DL A+++F ++ WN ++ LA S + +I ++ + S ++D+ T S
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
K + + Q+H +L+ GF Y K +D+A+KVFDEM +RD+
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
SWN++I+G + +++F +M G + T++ + C+ + G VH
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
V CN ++DMYSKCG +D A +VF+ MS +S++++ +MI +A G +A
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAGYAREGLAGEA 381
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDL 353
+ L ++M +G+ PD + A L C L++EG R+ + +K + + ++ +++D+
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+ G ++EA + M + D++ W +++G
Sbjct: 442 YAKCGSMQEAELVFSEMR-VKDIISWNTIIGG 472
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 161/336 (47%), Gaps = 9/336 (2%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F + WN+++ G + + +S + + S ++D T GCA
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCAD 308
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+ S +HS ++ F Y+K GDLD+A+ VF EM R + S+ +M
Sbjct: 309 SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSM 368
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
I+G A+ EA+ LF+ M+EEG P+ TV L+ C++ L +G+ VH +I + L
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
++ V NA++DMY+KCG + +A VF M K +I+WNT+I ++ N +AL L +
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMR-VKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 299 QMALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRA 357
+ + PD + L AC ++G + + + + S+VD+ +
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 358 GRIKEA---YDTINSMPMLPDVVLWQSLLGASKTYG 390
G + A +D I S D+V W ++ +G
Sbjct: 548 GALLLAHMLFDDIAS----KDLVSWTVMIAGYGMHG 579
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 125/304 (41%), Gaps = 3/304 (0%)
Query: 68 NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQ 127
+ S D N LR S A+ +D T L+ CA + + + +
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
+ + + GF Y GDL A +VFDE+ WN +++ LA+
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNA 247
+ +I LFK+M G + T + S L ++ GE +HG+I+ V N+
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
++ Y K VD A VF M+ + +I+WN++I + NG K L + QM + G+
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 308 DAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTI 367
D + ++ C + L+ G + + + + +++D+ + G + A
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 368 NSMP 371
M
Sbjct: 355 REMS 358
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 274/429 (63%), Gaps = 6/429 (1%)
Query: 153 KTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE-EGWRPNDVTVL 211
K G+ A+KV +++ +WN MI G + + EA+ K M +PN +
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 212 GALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCT 271
+L+AC++LG L + VH ++D +++N I+ +A++D+Y+KCG + + VF ++
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK-R 228
Query: 272 KSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRL 331
+ WN MI FA +G +A+ + +M + V PD++++L L C+H GL+EEG
Sbjct: 229 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEY 288
Query: 332 FDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
F LM ++P ++HYG++VDLLGRAGR+KEAY+ I SMP+ PDVV+W+SLL +S+TY
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYK 348
Query: 391 NVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYT 450
N E+ E+A + L + S GD+VLLSN+Y++ ++W ++VRE M + +RK G S+
Sbjct: 349 NPELGEIAIQNLSKAKS---GDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWL 405
Query: 451 EIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNY 510
E IH+F GD SH K IY ++ + + K+ G+ + TDLVL D+ EE+K+ LNY
Sbjct: 406 EFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNY 465
Query: 511 HSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKG 570
HSEKLA+AY ++ + GT I++ KN+R+C DCH IK +S + NR II+RDR RF RF+
Sbjct: 466 HSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFED 525
Query: 571 GVCSCGDYW 579
G+CSC DYW
Sbjct: 526 GLCSCRDYW 534
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 113/230 (49%), Gaps = 10/230 (4%)
Query: 58 FAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRS-VSRSPQKVDALTCSFALKGC 116
A ++ R + + WN ++ G + Q +A+ ++ +S + K + + + +L C
Sbjct: 116 LAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 117 ARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWN 176
AR A +HS ++ G + YAK GD+ +++VF + + D++ WN
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 177 AMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG----- 231
AMI+G A EAI +F M+ E P+ +T LG L+ CS G L++G+ G
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
+ + KL+ A++D+ + G V +AY + ++M ++ W +++
Sbjct: 296 FSIQPKLEHY----GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 299/560 (53%), Gaps = 37/560 (6%)
Query: 55 DLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSR-SPQKVDALTCSFAL 113
DL+ A F ++ WN+++ G +A+ + + R S D T + L
Sbjct: 229 DLAMAQ--FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVL 286
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYA--------------------- 152
CA QIHS ++ GFD Y+
Sbjct: 287 SACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLK 346
Query: 153 ------------KTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE 200
K GD++ A+ +F + RD+ +W AMI G Q EAI LF+ M
Sbjct: 347 IEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG 406
Query: 201 EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
G RPN T+ LS S L +L G+ +HG V +V V NA+I MY+K G +
Sbjct: 407 GGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITS 466
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN 320
A F + C + ++W +MI+A A +G +AL+L + M ++G+ PD ++Y+ AC
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Query: 321 HAGLVEEGVRLFDLMKG-SVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLW 379
HAGLV +G + FD+MK + P + HY +VDL GRAG ++EA + I MP+ PDVV W
Sbjct: 527 HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTW 586
Query: 380 QSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITK 439
SLL A + + N+++ ++A+ +L+ + + G + L+N+Y+A +W + ++R++M
Sbjct: 587 GSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDG 646
Query: 440 DVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDI 499
V+K GFS+ E+ K+H F D +HP EIY M +I IK GY T VLHD+
Sbjct: 647 RVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDL 706
Query: 500 GEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIV 559
EE K+ L +HSEKLA+A+GLIST + T ++++KNLR+C DCHT IK IS + REIIV
Sbjct: 707 EEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIV 766
Query: 560 RDRARFGRFKGGVCSCGDYW 579
RD RF FK G CSC DYW
Sbjct: 767 RDTTRFHHFKDGFCSCRDYW 786
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 169/427 (39%), Gaps = 73/427 (17%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA 106
L A S D+ + F ++ + W ++ G Q +AI + + +
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQ 146
Query: 107 LTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE 166
T + L A ++HS +++ G YAK GD A+ VFD
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 167 MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEE---GWR------------------- 204
M RDI+SWNAMI+ Q + + A+A F++M E W
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 205 ----------PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSK 254
P+ T+ LSAC+ L L G+ +H +IV D++ IV NA+I MYS+
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 255 CGFVDKA-----------------------YSVFQNMSCTKSL---------ITWNTMIM 282
CG V+ A Y +M+ K++ + W MI+
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386
Query: 283 AFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKP 342
+ +G +A++L M G P++ + A L + + G ++ GS VK
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQI----HGSAVKS 442
Query: 343 NMKHYGSV----VDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA-EM 397
+ SV + + +AG I A + + D V W S++ A +G+ E A E+
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 398 ASRKLVE 404
L+E
Sbjct: 503 FETMLME 509
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 274/436 (62%), Gaps = 8/436 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y+K G LD AQ +FD+ K+D+ W MIS + P EA+ +F+ M G +P+ V++
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+SAC+ LG L + + VH I L+ + + NA+I+MY+KCG +D VF+ M
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP- 406
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+++++W++MI A +M+G+ AL L +M + V P+ V+++ L C+H+GLVEEG +
Sbjct: 407 RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 331 LFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
+F M + P ++HYG +VDL GRA ++EA + I SMP+ +VV+W SL+ A + +
Sbjct: 467 IFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIH 526
Query: 390 GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
G +E+ + A+++++E+ + G VL+SN+YA QRW DV+ +R M K+V K G S
Sbjct: 527 GELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSR 586
Query: 450 TEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALN 509
+ + K H+F+ GD+ H EIYAK+DE+ ++K GY VL D+ EE+K + +
Sbjct: 587 IDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVL 646
Query: 510 YHSEKLAVAYGLISTVNGTP------IQVIKNLRICGDCHTVIKIISNIYNREIIVRDRA 563
+HSEKLA+ +GL++ I+++KNLR+C DCH K++S +Y REIIVRDR
Sbjct: 647 WHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRT 706
Query: 564 RFGRFKGGVCSCGDYW 579
RF +K G+CSC DYW
Sbjct: 707 RFHCYKNGLCSCRDYW 722
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 184/407 (45%), Gaps = 36/407 (8%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTND-W 74
C SL HIKQL AH++ T H + L L S + +LS+A +F I +P + +
Sbjct: 22 CKSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVF 79
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
N LR L+ S +P I +Y+ + ++D + LK ++ E ++H +
Sbjct: 80 NPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFK 139
Query: 135 FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIAL 194
YA G ++ A+ VFDEM RD+ +WN MI + +EA L
Sbjct: 140 IATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKL 199
Query: 195 FKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM-------------- 240
F+ MK+ P+++ + +SAC + G ++ ++ ++++ + M
Sbjct: 200 FEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAG 259
Query: 241 -----------------NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
N+ V A++ YSKCG +D A +F K L+ W TMI A
Sbjct: 260 AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE-KKDLVCWTTMISA 318
Query: 284 FAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPN 343
+ + +AL + ++M G+ PD VS + + AC + G++++ + + + ++
Sbjct: 319 YVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESE 378
Query: 344 MKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ +++++ + G + D MP +VV W S++ A +G
Sbjct: 379 LSINNALINMYAKCGGLDATRDVFEKMPR-RNVVSWSSMINALSMHG 424
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 120/240 (50%), Gaps = 1/240 (0%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S L A IF + + W ++ S P +A+ + + S K D ++
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
+ CA +A +HS + G ++ YAK G LDA + VF++MP+R
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
++ SW++MI+ L+ ++A++LF RMK+E PN+VT +G L CS G +++G+ +
Sbjct: 409 NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIF 468
Query: 231 GYIVDE-KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
+ DE + + ++D++ + + +A V ++M +++ W +++ A ++G+
Sbjct: 469 ASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE 528
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 119/271 (43%), Gaps = 2/271 (0%)
Query: 101 PQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAA 160
P + + + L+ + + + Q+H+ +LR + + + +L A
Sbjct: 4 PPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYA 63
Query: 161 QKVFDEMPKR-DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQ 219
VF +P + +N + L++ S P I ++R++ G R + + L L A S+
Sbjct: 64 LNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSK 123
Query: 220 LGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNT 279
+ AL +G +HG + V +DMY+ CG ++ A +VF MS + ++TWNT
Sbjct: 124 VSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS-HRDVVTWNT 182
Query: 280 MIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV 339
MI + G +A L ++M V PD + + AC G + +++ + +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 340 VKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
V+ + ++V + AG + A + M
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 364 bits (934), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/430 (43%), Positives = 273/430 (63%), Gaps = 3/430 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMK-EEGWRPNDVT 209
Y + G++DAA + F+ MP+++I SWN +ISGL QGS EAI +F M+ +EG + VT
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
++ SAC LGAL + ++ YI + ++V + ++DM+S+CG + A S+F +++
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
+ + W I A AM G+ +A++L D M G+ PD V+++ AL AC+H GLV++G
Sbjct: 533 -NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 330 RLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKT 388
+F ++K V P HYG +VDLLGRAG ++EA I MPM P+ V+W SLL A +
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 389 YGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
GNVEMA A+ K+ + G +VLLSNVYA+ RW+D+ +VR +M K +RK PG S
Sbjct: 652 QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Query: 449 YTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNAL 508
+I K H+F +GD+SHP I A +DE+ R G+ VL D+ E++K L
Sbjct: 712 SIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFML 771
Query: 509 NYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRF 568
+ HSEKLA+AYGLIS+ GT I+++KNLR+C DCH+ K S +YNREII+RD RF
Sbjct: 772 SRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYI 831
Query: 569 KGGVCSCGDY 578
+ G CSCGD+
Sbjct: 832 RQGKCSCGDF 841
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 191/387 (49%), Gaps = 13/387 (3%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLL-ELCAISPAADLSFAAQIFRRIQNPSTN-D 73
C ++ +K L G + + TKL+ C + LSFA ++F ++ T
Sbjct: 42 CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+N+++RG A S +AI + + S D T F L CA++ QIH ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ G+ YA+ G+LD+A+KVFDEM +R++ SW +MI G A+ +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 194 LFKRM-KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMY 252
LF RM ++E PN VT++ +SAC++L L+ GE V+ +I + +++N ++ +A++DMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
KC +D A +F + +L N M + G +AL + + M GV PD +S
Sbjct: 282 MKCNAIDVAKRLFDEYGAS-NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 313 LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV----VDLLGRAGRIKEAYDTIN 368
L+A+ +C+ + G G V++ + + ++ +D+ + R A+ +
Sbjct: 341 LSAISSCSQLRNILWGKSC----HGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 369 SMPMLPDVVLWQSLLGASKTYGNVEMA 395
M VV W S++ G V+ A
Sbjct: 397 RMSN-KTVVTWNSIVAGYVENGEVDAA 422
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 174/386 (45%), Gaps = 35/386 (9%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAIS-WYRSVSRSPQKVDALTCSFA 112
+L A ++F + + W +++ G A A+ ++R V +++T
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
+ CA+ ++++ + G + Y K +D A+++FDE ++
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
NAM S + EA+ +F M + G RP+ +++L A+S+CSQL + G+ HGY
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
++ + +CNA+IDMY KC D A+ +F MS K+++TWN+++ + NG+
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDA 421
Query: 293 ALDLLDQM--------------------------------ALDGVHPDAVSYLAALCACN 320
A + + M + +GV+ D V+ ++ AC
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 321 HAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQ 380
H G ++ ++ ++ + ++ +++ ++VD+ R G + A NS+ DV W
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWT 540
Query: 381 SLLGASKTYGNVEMAEMASRKLVEMG 406
+ +GA GN E A ++E G
Sbjct: 541 AAIGAMAMAGNAERAIELFDDMIEQG 566
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 2/233 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSV-SRSPQKVDALTCSFALKGCA 117
A + F + + WN ++ GL +AI + S+ S+ D +T C
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
A I+ + + G +++ GD ++A +F+ + RD+++W A
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-EIVHGYIVDE 236
I +A AI LF M E+G +P+ V +GAL+ACS G ++QG EI + +
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
+ + ++D+ + G +++A + ++M + + WN+++ A + G+
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/525 (36%), Positives = 282/525 (53%), Gaps = 2/525 (0%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L A I R W ++ G +A++ +R + + D + + A+
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
CA E QIH+Q GF + Y++ G ++ + F++ D +W
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAW 660
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
NA++SG Q EA+ +F RM EG N+ T A+ A S+ +KQG+ VH I
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
D VCNA+I MY+KCG + A F +S TK+ ++WN +I A++ +G G +ALD
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKNEVSWNAIINAYSKHGFGSEALD 779
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLL 354
DQM V P+ V+ + L AC+H GLV++G+ F+ M + P +HY VVD+L
Sbjct: 780 SFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDML 839
Query: 355 GRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFV 414
RAG + A + I MP+ PD ++W++LL A + N+E+ E A+ L+E+ +V
Sbjct: 840 TRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYV 899
Query: 415 LLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYA 474
LLSN+YA ++W R+ M K V+K PG S+ E+ IH F GDQ+HP EI+
Sbjct: 900 LLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959
Query: 475 KMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIK 534
++ R GY +L+++ E KD + HSEKLA+++GL+S PI V+K
Sbjct: 960 YFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMK 1019
Query: 535 NLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
NLR+C DCH IK +S + NREIIVRD RF F+GG CSC DYW
Sbjct: 1020 NLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 160/333 (48%), Gaps = 3/333 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
DL A ++F + + WN +++ LA + + + + T S L
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 114 KGC-ARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
+ C ++ F QIH+++L G Y++ G +D A++VFD + +D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
+SW AMISGL++ EAI LF M G P LSAC ++ +L+ GE +HG
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
++ + VCNA++ +Y G + A +F NMS + +T+NT+I + G G K
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEK 372
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVD 352
A++L +M LDG+ PD+ + + + AC+ G + G +L N K G++++
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
L + I+ A D + +VVLW +L A
Sbjct: 433 LYAKCADIETALDYFLETE-VENVVLWNVMLVA 464
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 160/371 (43%), Gaps = 3/371 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
+L A IF + +N ++ GL+ +A+ ++ + + D+ T + +
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
C+ T Q+H+ + GF + YAK D++ A F E ++
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
WN M+ + +F++M+ E PN T L C +LG L+ GE +H I
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ +N VC+ +IDMY+K G +D A+ + + K +++W TMI + KA
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAGYTQYNFDDKA 575
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDL 353
L QM G+ D V A+ AC ++EG ++ S ++ ++V L
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDF 413
R G+I+E+Y D + W +L+ + GN E A ++ G ++ +F
Sbjct: 636 YSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN-NNF 693
Query: 414 VLLSNVYAARQ 424
S V AA +
Sbjct: 694 TFGSAVKAASE 704
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 168/373 (45%), Gaps = 4/373 (1%)
Query: 18 SLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAV 77
+L +QL A+ G + LL L A AD+ A F + + WN +
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYA--KCADIETALDYFLETEVENVVLWNVM 461
Query: 78 LRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGF 137
L + + +R + + T LK C R QIHSQ+++ F
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 138 DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKR 197
YAK G LD A + +D+ SW MI+G Q + ++A+ F++
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 198 MKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGF 257
M + G R ++V + A+SAC+ L ALK+G+ +H ++ NA++ +YS+CG
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 258 VDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALC 317
++++Y F+ + I WN ++ F +G+ +AL + +M +G+ + ++ +A+
Sbjct: 642 IEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 318 ACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVV 377
A + +++G ++ ++ + + +++ + + G I +A + +V
Sbjct: 701 AASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 760
Query: 378 LWQSLLGASKTYG 390
W +++ A +G
Sbjct: 761 -WNAIINAYSKHG 772
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 156/344 (45%), Gaps = 20/344 (5%)
Query: 90 AISWYRSVSRSPQ--KVDAL----------TCSFALKGCARAL-TFSEATQIHSQVLRFG 136
AIS Y S S Q ++D++ T + L+GC + + E ++HSQ+L+ G
Sbjct: 56 AISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLG 115
Query: 137 FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFK 196
D+ Y GDL A KVFDEMP+R I +WN MI LA + E LF
Sbjct: 116 LDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFV 175
Query: 197 RMKEEGWRPNDVTVLGALSACSQLG-ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKC 255
RM E PN+ T G L AC A E +H I+ + L + +VCN +ID+YS+
Sbjct: 176 RMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRN 235
Query: 256 GFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAA 315
GFVD A VF + K +W MI + N +A+ L M + G+ P ++ +
Sbjct: 236 GFVDLARRVFDGLR-LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSV 294
Query: 316 LCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPD 375
L AC +E G +L L+ + ++V L G + A ++M D
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ-RD 353
Query: 376 VVLWQSLLGASKTYGNVEMAEMASRKL----VEMGSNSCGDFVL 415
V + +L+ G E A +++ +E SN+ V+
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/532 (34%), Positives = 290/532 (54%), Gaps = 2/532 (0%)
Query: 49 AISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALT 108
A S + A Q+F + S WN ++ + ++A+ + + K T
Sbjct: 105 AYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFT 164
Query: 109 CSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP 168
S L C E ++H ++ D YAK G + A +VF+ M
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
+ +W++M++G Q EA+ L++R + N T+ + ACS L AL +G+
Sbjct: 225 DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 284
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG 288
+H I NV V ++ +DMY+KCG + ++Y +F + K+L WNT+I FA +
Sbjct: 285 MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHA 343
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHY 347
+ + L ++M DG+HP+ V++ + L C H GLVEEG R F LM+ + + PN+ HY
Sbjct: 344 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 403
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS 407
+VD+LGRAG + EAY+ I S+P P +W SLL + + Y N+E+AE+A+ KL E+
Sbjct: 404 SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEP 463
Query: 408 NSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHP 467
+ G+ VLLSN+YAA ++W ++ + R+ + DV+KV G S+ +I K+H F G+ HP
Sbjct: 464 ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHP 523
Query: 468 NWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNG 527
+EI + +D + + + +GY + LHD+ K+ L HSEKLA+ +GL+
Sbjct: 524 RIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPES 583
Query: 528 TPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+P++++KNLRIC DCH +K S R IIVRD RF F G CSCGD+W
Sbjct: 584 SPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 140/273 (51%), Gaps = 2/273 (0%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L+ CAR EA H +++R + Y+K G ++ A++VFD M +R +
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
SWN MI + +EA+ +F M+ EG++ ++ T+ LSAC + + +H
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
V +D+N+ V A++D+Y+KCG + A VF++M KS +TW++M+ + N + +
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKNYEE 246
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVD 352
AL L + + + + + +CAC++ + EG ++ ++ S N+ S VD
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+ + G ++E+Y I S ++ LW +++
Sbjct: 307 MYAKCGSLRESY-IIFSEVQEKNLELWNTIISG 338
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 358 bits (919), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 296/545 (54%), Gaps = 47/545 (8%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+NA++ G +A+ R + S ++D T ++ CA A Q+H+ VL
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 134 R-----FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA----------- 177
R F FD Y K G D A+ +F++MP +D+ SWNA
Sbjct: 314 RREDFSFHFD------NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 178 --------------------MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSAC 217
MISGLA+ E + LF MK EG+ P D GA+ +C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 218 SQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITW 277
+ LGA G+ H ++ D ++ NA+I MY+KCG V++A VF+ M C S ++W
Sbjct: 428 AVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS-VSW 486
Query: 278 NTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKG 337
N +I A +G G +A+D+ ++M G+ PD ++ L L AC+HAGLV++G + FD M+
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 338 SV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAE 396
+ P HY ++DLL R+G+ +A I S+P P +W++LL + +GN+E+
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 397 MASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKI 456
+A+ KL + G ++LLSN++AA +W +V RVR+ M + V+K S+ E++ ++
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666
Query: 457 HKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEED--KDNALNYHSEK 514
H F+ D SHP + +Y + ++ ++ GY T VLHD+ E D K++ L HSEK
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDV-ESDGHKEDMLTTHSEK 725
Query: 515 LAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCS 574
+AVA+GL+ GT I++ KNLR CGDCH + +S + R+II+RDR RF F+ G CS
Sbjct: 726 IAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECS 785
Query: 575 CGDYW 579
CG++W
Sbjct: 786 CGNFW 790
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 12/289 (4%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A IF+ ++ + W ++ GLA + + + + + R + S A+K CA
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+ Q H+Q+L+ GFD+ YAK G ++ A++VF MP D SWNA+
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
I+ L Q EA+ +++ M ++G RP+ +T+L L+ACS G + QG D
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR----KYFDSME 545
Query: 239 DMNVIVCNA-----VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ I A +ID+ + G A SV +++ + W ++ ++G+
Sbjct: 546 TVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN--ME 603
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHA-GLVEEGVRLFDLMKGSVVK 341
L ++ L G+ P+ L + A G EE R+ LM+ VK
Sbjct: 604 LGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVK 652
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 130/305 (42%), Gaps = 66/305 (21%)
Query: 151 YAKTGDLDAAQKVFDEMP--KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDV 208
Y +GD+ A+ VF++ P RD +NAMI+G + + AI LF +MK EG++P++
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 209 TVLGALSA----------CSQL--GALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKC- 255
T L+ C Q ALK G GYI V NA++ +YSKC
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGA---GYITS--------VSNALVSVYSKCA 198
Query: 256 ----------------------------------GFVDKAYSVFQNMSCTKSLITWNTMI 281
G+ D + + M L+ +N MI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 282 MAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG--VRLFDLMKGSV 339
+ G +AL+++ +M G+ D +Y + + AC AGL++ G V + L +
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 340 VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMAS 399
+ S+V L + G+ EA MP D+V W +LL + G++ A++
Sbjct: 319 ---SFHFDNSLVSLYYKCGKFDEARAIFEKMPA-KDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 400 RKLVE 404
+++ E
Sbjct: 375 KEMKE 379
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 358 bits (918), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 191/510 (37%), Positives = 276/510 (54%), Gaps = 7/510 (1%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFA--LKGCARALTFSEATQIHSQ 131
+N V+ + + Q ++ ++R + D FA L A + Q+H Q
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQ--CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQ 376
Query: 132 VLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEA 191
L D+ YAK + A+ +F +P+R SW A+ISG Q
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 192 IALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDM 251
+ LF +M+ R + T L A + +L G+ +H +I+ NV + ++DM
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDM 496
Query: 252 YSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVS 311
Y+KCG + A VF+ M ++ ++WN +I A A NGDG A+ +M G+ PD+VS
Sbjct: 497 YAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 312 YLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
L L AC+H G VE+G F M + P KHY ++DLLGR GR EA ++ M
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Query: 371 PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS-NSCGDFVLLSNVYAARQRWHDV 429
P PD ++W S+L A + + N +AE A+ KL M +V +SN+YAA W V
Sbjct: 616 PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKV 675
Query: 430 KRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYT 489
+ V++AM + ++KVP +S+ E++ KIH F + DQ+HPN EI K++E+ I+ GY
Sbjct: 676 RDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYK 735
Query: 490 AKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKII 549
T V+ D+ E+ K +L YHSE+LAVA+ LIST G PI V+KNLR C DCH IK+I
Sbjct: 736 PDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLI 795
Query: 550 SNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
S I REI VRD +RF F GVCSCGDYW
Sbjct: 796 SKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 152/351 (43%), Gaps = 2/351 (0%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L A +F I + +N ++ G T++I + + +S + T S LK
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
F+ Q+H+ + GF Y+K + + +FDEMP+ D S+
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
N +IS +Q + ++ F+ M+ G+ + LS + L +L+ G +H +
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
D + V N+++DMY+KC ++A +F+++ ++ ++W +I + G L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISGYVQKGLHGAGLK 438
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLG 355
L +M + D ++ L A + G +L + S N+ +VD+
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ G IK+A MP + V W +L+ A G+ E A A K++E G
Sbjct: 499 KCGSIKDAVQVFEEMPD-RNAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 10/336 (2%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKV--DALTCSF 111
D+S A +F + + + W ++ A + +A +R + RS D +T +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 112 ALKGCARALTFSEATQIHSQVLRFGFDAX--XXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
L GC A+ + Q+H+ ++ GFD Y + LD A +F+E+P+
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
+D ++N +I+G + E+I LF +M++ G +P+D T G L A L G+ +
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 230 HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
H V + V N ++D YSK V + +F M +++N +I +++ D
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISSYS-QAD 330
Query: 290 GYKA-LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG 348
Y+A L +M G + L + ++ G R ++ H G
Sbjct: 331 QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG-RQLHCQALLATADSILHVG 389
Query: 349 -SVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
S+VD+ + +EA S+P V W +L+
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRT-TVSWTALI 424
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 10/262 (3%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM--KEEGWRPNDV 208
+ KTGD+ +A+ +FD MP R + +W ++ A+ S +EA LF++M P+ V
Sbjct: 89 HVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHV 148
Query: 209 TVLGALSACSQLGALKQGEI--VHGYIVDEKLDMN--VIVCNAVIDMYSKCGFVDKAYSV 264
T L C+ A+ Q + VH + V D N + V N ++ Y + +D A +
Sbjct: 149 TFTTLLPGCND--AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVL 206
Query: 265 FQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGL 324
F+ + K +T+NT+I + +G +++ L +M G P ++ L A
Sbjct: 207 FEEIP-EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 325 VEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLG 384
G +L L + + ++D + R+ E + MP L D V + ++
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL-DFVSYNVVIS 324
Query: 385 ASKTYGNVEMAEMASRKLVEMG 406
+ E + R++ MG
Sbjct: 325 SYSQADQYEASLHFFREMQCMG 346
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 357 bits (916), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 297/523 (56%), Gaps = 5/523 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F+++ + W ++ GL + + +A+ ++++ R K + + + CA
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
A F Q+H +++ GF YA + ++KVFDE +A W A+
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
+SG + + +A+++F M PN T L++CS LG L G+ +HG V L
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGL 357
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
+ + V N+++ MYS G V+ A SVF + KS+++WN++I+ A +G G A +
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF-KKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV--VKPNMKHYGSVVDLLGR 356
QM PD +++ L AC+H G +E+G +LF M + + ++HY +VD+LGR
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGR 476
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLL 416
G++KEA + I M + P+ ++W +LL A + + +V+ E A+ + + S S +VLL
Sbjct: 477 CGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLL 536
Query: 417 SNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKM 476
SN+YA+ RW +V ++R M + K PG S+ I K H+F +GDQ P+ IY K+
Sbjct: 537 SNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKL 594
Query: 477 DEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNL 536
+ ++ ++K GY LHD+ +E K+ L YHSE+LA+A+GLI+TV G+ + V+KNL
Sbjct: 595 EFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNL 654
Query: 537 RICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
R+C DCHTVIK+IS + REI++RD RF FK G CSCGDYW
Sbjct: 655 RVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 9/185 (4%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y ++ L A +FDEMP RD+ SWN+MISG + N A+ LF M E + V+
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPER----SVVSW 131
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
++ C + G + Q E + Y + K + N+++ Y + G VD A +F+ M
Sbjct: 132 TAMVNGCFRSGKVDQAERLF-YQMPVK---DTAAWNSMVHGYLQFGKVDDALKLFKQMP- 186
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
K++I+W TMI N +ALDL M + + + + AC +A G++
Sbjct: 187 GKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQ 246
Query: 331 LFDLM 335
+ L+
Sbjct: 247 VHGLI 251
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 357 bits (916), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 177/431 (41%), Positives = 274/431 (63%), Gaps = 3/431 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
+ + G++ A++VFD M RD A+W MI + EA+ LF +M+++G RP+ ++
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+ LS C+ L +L+ G VH ++V + D +V V + ++ MY KCG + KA VF S
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS- 393
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+K +I WN++I +A +G G +AL + +M G P+ V+ +A L AC++AG +EEG+
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLE 453
Query: 331 LFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
+F+ M+ V P ++HY VD+LGRAG++ +A + I SM + PD +W +LLGA KT+
Sbjct: 454 IFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTH 513
Query: 390 GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
+++AE+A++KL E ++ G +VLLS++ A+R +W DV VR+ M T +V K PG S+
Sbjct: 514 SRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSW 573
Query: 450 TEIDCKIHKFINGD-QSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNAL 508
E+ K+H F G ++HP I +++ ++ GY+ VLHD+ EE+K ++L
Sbjct: 574 IEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSL 633
Query: 509 NYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRF 568
+ HSE+LAVAYGL+ G PI+V+KNLR+CGDCH IK+IS + REII+RD RF F
Sbjct: 634 SRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHF 693
Query: 569 KGGVCSCGDYW 579
G CSC DYW
Sbjct: 694 NNGECSCRDYW 704
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 1/238 (0%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA 106
+ ++S A ++F +++ W +++ +A+ + + + +
Sbjct: 272 IVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 107 LTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE 166
+ L CA + Q+H+ ++R FD Y K G+L A+ VFD
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391
Query: 167 MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG 226
+DI WN++ISG A EA+ +F M G PN VT++ L+ACS G L++G
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Query: 227 -EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
EI + V + +DM + G VDKA + ++M+ W ++ A
Sbjct: 452 LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGA 509
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 20/246 (8%)
Query: 152 AKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVL 211
++ G ++ A+K FD + + I SWN+++SG P EA LF M E N V+
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWN 83
Query: 212 GALSACSQLGALKQGEIVHGYIVDEKL-DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
G +S G +K IV V E + + NV+ A++ Y + G V +A S+F M
Sbjct: 84 GLVS-----GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP- 137
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
++ ++W M +G KA L D M + V + + + LC G V+E
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVA-STNMIGGLC---REGRVDEARL 193
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+FD M+ + N+ + +++ + R+ A MP +V W S+L G
Sbjct: 194 IFDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS-WTSMLLGYTLSG 248
Query: 391 NVEMAE 396
+E AE
Sbjct: 249 RIEDAE 254
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVT- 209
Y K + A+ VF+ MP+R++ SW AM+ G Q EA +LF RM E N+V+
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSW 144
Query: 210 --VLGAL----------------------SACSQLGAL-KQGEIVHGYIV-DEKLDMNVI 243
+ G L ++ + +G L ++G + ++ DE + NV+
Sbjct: 145 TVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVV 204
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALD 303
+I Y + VD A +F+ M K+ ++W +M++ + ++G A + + M +
Sbjct: 205 TWTTMITGYRQNNRVDVARKLFEVMP-EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMK 263
Query: 304 GVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
V ++ A + G + + R+FDLM+ + N G ++ R G EA
Sbjct: 264 PV----IACNAMIVGFGEVGEISKARRVFDLMED---RDNATWRG-MIKAYERKGFELEA 315
Query: 364 YDTINSM------PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLV 403
D M P P ++ S+L T +++ LV
Sbjct: 316 LDLFAQMQKQGVRPSFPSLI---SILSVCATLASLQYGRQVHAHLV 358
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 123/312 (39%), Gaps = 45/312 (14%)
Query: 106 ALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFD 165
+ CSF + +R +EA + L+F Y G A+++FD
Sbjct: 17 GVNCSFEISRLSRIGKINEARKFFDS-LQF---KAIGSWNSIVSGYFSNGLPKEARQLFD 72
Query: 166 EMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ 225
EM +R++ SWN ++SG + EA +F+ M E N V+ + Q G + +
Sbjct: 73 EMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGE 128
Query: 226 GE----------------IVHGYIVDEKLD-----------MNVIVCNAVIDMYSKCGFV 258
E + G I D ++D +V+ +I + G V
Sbjct: 129 AESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRV 188
Query: 259 DKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCA 318
D+A +F M ++++TW TMI + N A L + M VS+ + L
Sbjct: 189 DEARLIFDEMR-ERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLG 243
Query: 319 CNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVL 378
+G +E+ F++M +KP + +V G G I +A + M D
Sbjct: 244 YTLSGRIEDAEEFFEVMP---MKPVIACNAMIVG-FGEVGEISKARRVFDLMED-RDNAT 298
Query: 379 WQSLLGASKTYG 390
W+ ++ A + G
Sbjct: 299 WRGMIKAYERKG 310
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 328/604 (54%), Gaps = 45/604 (7%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWN 75
C +L IKQ+ H++ G TKL+ +A ++ +Q + W
Sbjct: 59 CINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWT 118
Query: 76 AVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRF 135
AV+RG A+ + +AI+ Y + + + T S LK C + Q H+Q R
Sbjct: 119 AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL 178
Query: 136 GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWN------------------- 176
Y K +D A+KVFDEMP+RD+ SW
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 177 ------------AMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALK 224
AM++G AQ ++P EA+ F RM++ G R ++VTV G +SAC+QLGA K
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 225 QGEIV------HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWN 278
+ GY + +V++ +A+IDMYSKCG V++A +VF +M+ K++ T++
Sbjct: 299 YADRAVQIAQKSGYSPSD----HVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYS 353
Query: 279 TMIMAFAMNGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKG 337
+MI+ A +G +AL L M + P+ V+++ AL AC+H+GLV++G ++FD M
Sbjct: 354 SMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQ 413
Query: 338 SV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAE 396
+ V+P HY +VDLLGR GR++EA + I +M + P +W +LLGA + + N E+AE
Sbjct: 414 TFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAE 473
Query: 397 MASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYT-EIDCK 455
+A+ L E+ + G+++LLSNVYA+ W V RVR+ + K ++K P S+ + + +
Sbjct: 474 IAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQ 533
Query: 456 IHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKL 515
+HKF G+ +HP +I K++E+ R+ GY V +D+ + K L H+EKL
Sbjct: 534 MHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKL 593
Query: 516 AVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSC 575
A+A+ L++T + I ++KNLR+C DCH +++ S + + II+RD RF F+ G CSC
Sbjct: 594 ALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSC 653
Query: 576 GDYW 579
GD+W
Sbjct: 654 GDFW 657
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/546 (35%), Positives = 314/546 (57%), Gaps = 14/546 (2%)
Query: 42 TKLLELCAISPAADLSFAAQIFRRIQNPS---TNDWNAVLRGLAMSPQPTQAISWYRSVS 98
+KL+ L ++ DL A +IF + + S W A+ G + + P A+ Y +
Sbjct: 171 SKLITLFSVCRRLDL--ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML 228
Query: 99 RSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLD 158
S + + S ALK C IH+Q+++ Y ++G D
Sbjct: 229 CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFD 288
Query: 159 AAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACS 218
A+KVFD M +R++ +WN++IS L++ R +E LF++M+EE + T+ L ACS
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Query: 219 QLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWN 278
++ AL G+ +H I+ K +V + N+++DMY KCG V+ + VF M TK L +WN
Sbjct: 349 RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM-LTKDLASWN 407
Query: 279 TMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS 338
M+ +A+NG+ + ++L + M GV PD ++++A L C+ GL E G+ LF+ MK
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTE 467
Query: 339 V-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEM 397
V P ++HY +VD+LGRAG+IKEA I +MP P +W SLL + + +GNV + E+
Sbjct: 468 FRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEI 527
Query: 398 ASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIH 457
A+++L + ++ G++V++SN+YA + W +V ++RE M + V+K G S+ ++ KI
Sbjct: 528 AAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQ 587
Query: 458 KFINGD----QSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSE 513
F+ G ++ +K+++ ++ E I+ GY+ T +VLHD+ EE K N + HSE
Sbjct: 588 IFVAGGGYEFRNSDEYKKVWTELQE---AIEKSGYSPNTSVVLHDVDEETKANWVCGHSE 644
Query: 514 KLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVC 573
+LA Y LI T G PI++ KNLR+C DCH+ +KI+S + R I++RD RF F G+C
Sbjct: 645 RLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGIC 704
Query: 574 SCGDYW 579
SC DYW
Sbjct: 705 SCKDYW 710
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 305/551 (55%), Gaps = 3/551 (0%)
Query: 19 LIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVL 78
LI + + AH++ + H LL + A L A ++F ++ W ++
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYA--KCGSLEEARKVFEKMPQRDFVTWTTLI 133
Query: 79 RGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFD 138
G + +P A+ ++ + R + T S +K A Q+H ++ GFD
Sbjct: 134 SGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD 193
Query: 139 AXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM 198
+ Y + G +D AQ VFD + R+ SWNA+I+G A+ S +A+ LF+ M
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253
Query: 199 KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFV 258
+G+RP+ + ACS G L+QG+ VH Y++ + N ++DMY+K G +
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313
Query: 259 DKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCA 318
A +F ++ + +++WN+++ A+A +G G +A+ ++M G+ P+ +S+L+ L A
Sbjct: 314 HDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA 372
Query: 319 CNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVL 378
C+H+GL++EG ++LMK + P HY +VVDLLGRAG + A I MP+ P +
Sbjct: 373 CSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAI 432
Query: 379 WQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMIT 438
W++LL A + + N E+ A+ + E+ + G V+L N+YA+ RW+D RVR+ M
Sbjct: 433 WKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492
Query: 439 KDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHD 498
V+K P S+ EI+ IH F+ D+ HP +EI K +E+ +IK GY T V+
Sbjct: 493 SGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVH 552
Query: 499 IGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREII 558
+ +++++ L YHSEK+A+A+ L++T G+ I + KN+R+CGDCHT IK+ S + REII
Sbjct: 553 VDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREII 612
Query: 559 VRDRARFGRFK 569
VRD RF FK
Sbjct: 613 VRDTNRFHHFK 623
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 138/278 (49%), Gaps = 2/278 (0%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
LK C + +H+ +L+ F YAK G L+ A+KVF++MP+RD
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
+W +ISG +Q RP +A+ F +M G+ PN+ T+ + A + G +HG+
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
V D NV V +A++D+Y++ G +D A VF + +++ ++WN +I A K
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE-SRNDVSWNALIAGHARRSGTEK 245
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVD 352
AL+L M DG P SY + AC+ G +E+G + M S K +++D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ ++G I +A + + DVV W SLL A +G
Sbjct: 306 MYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHG 342
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 269/430 (62%), Gaps = 2/430 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y +G+L+ A+++F+ MP++++ SW +I+G +Q AI+ + M E+G +PN+ T+
Sbjct: 237 YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTI 296
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
LSACS+ GAL G +HGYI+D + ++ + A++DMY+KCG +D A +VF NM+
Sbjct: 297 AAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN- 355
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
K +++W MI +A++G ++A+ QM G PD V +LA L AC ++ V+ G+
Sbjct: 356 HKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLN 415
Query: 331 LFDLMK-GSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
FD M+ ++P +KHY VVDLLGRAG++ EA++ + +MP+ PD+ W +L A K +
Sbjct: 416 FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 475
Query: 390 GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
AE S+ L+E+ CG ++ L +A++ DV++ R ++ + + G+SY
Sbjct: 476 KGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSY 535
Query: 450 TEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALN 509
E+D +++KF GD SH +EI K+DEI GY D +HDI EE+K+N
Sbjct: 536 IELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTG 595
Query: 510 YHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFK 569
HSEKLA+ G + T GT I++IKNLRICGDCH+++K +S I R+I++RD +F FK
Sbjct: 596 IHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFK 655
Query: 570 GGVCSCGDYW 579
G CSCGDYW
Sbjct: 656 DGRCSCGDYW 665
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 10/256 (3%)
Query: 53 AADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFA 112
+ +L+ A Q+F + + W ++ G + + AIS Y + K + T +
Sbjct: 240 SGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAV 299
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L C+++ +IH +L G YAK G+LD A VF M +DI
Sbjct: 300 LSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI 359
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-----E 227
SW AMI G A R ++AI F++M G +P++V L L+AC + G
Sbjct: 360 LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDS 419
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
+ Y ++ L V+ V+D+ + G +++A+ + +NM L TW + A +
Sbjct: 420 MRLDYAIEPTLKHYVL----VVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 475
Query: 288 GDGYKALDLLDQMALD 303
GY+ + + Q L+
Sbjct: 476 -KGYRRAESVSQNLLE 490
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 14/248 (5%)
Query: 127 QIHSQVLRFG-FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQG 185
+H+Q+LR G + K+ D + +F +R+ NA+I GL +
Sbjct: 47 HVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLS--IFRNSEERNPFVLNALIRGLTEN 104
Query: 186 SRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVC 245
+R ++ F M G +P+ +T L + S+LG G +H + +D + V
Sbjct: 105 ARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVR 164
Query: 246 NAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMAL 302
+++DMY+K G + A+ VF+ +S++ WN +I + D + A L M
Sbjct: 165 LSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMP- 223
Query: 303 DGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKE 362
++ S+ + +G + +LF+LM + N+ + ++++ + G +
Sbjct: 224 ---ERNSGSWSTLIKGYVDSGELNRAKQLFELMP----EKNVVSWTTLINGFSQTGDYET 276
Query: 363 AYDTINSM 370
A T M
Sbjct: 277 AISTYFEM 284
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 355 bits (910), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 283/499 (56%), Gaps = 1/499 (0%)
Query: 81 LAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAX 140
A + P ++ + + + + D A K CA +H ++ G+DA
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 141 XXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE 200
YAK G++ A+K+FDEMP+R++ +W+ M+ G AQ EA+ LFK
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 201 EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
E ND + +S C+ L+ G +HG + D + V ++++ +YSKCG +
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN 320
AY VF + K+L WN M+ A+A + K ++L +M L G+ P+ +++L L AC+
Sbjct: 271 AYQVFNEVP-VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 321 HAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQ 380
HAGLV+EG FD MK S ++P KHY S+VD+LGRAGR++EA + I +MP+ P +W
Sbjct: 330 HAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 381 SLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKD 440
+LL + + N E+A A+ K+ E+G S G + LSN YAA R+ D + R+ + +
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449
Query: 441 VRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIG 500
+K G S+ E K+H F G++ H KEIY K+ E+ ++ GY A T VL ++
Sbjct: 450 EKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVD 509
Query: 501 EEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVR 560
++K+ + YHSE+LA+A+GLI+ PI+V+KNLR+CGDCH IK +S R IIVR
Sbjct: 510 GDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVR 569
Query: 561 DRARFGRFKGGVCSCGDYW 579
D RF RF+ G CSC DYW
Sbjct: 570 DNNRFHRFEDGKCSCNDYW 588
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 108/230 (46%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
++ +A ++F + + W+ ++ G A + +A+ ++ V+ + S +
Sbjct: 165 GEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVI 224
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
CA + QIH ++ FD+ Y+K G + A +VF+E+P +++
Sbjct: 225 SVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLG 284
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
WNAM+ AQ S + I LFKRMK G +PN +T L L+ACS G + +G +
Sbjct: 285 IWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM 344
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
+ +++ +++DM + G + +A V NM + W ++ +
Sbjct: 345 KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 394
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 148/312 (47%), Gaps = 8/312 (2%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L AR + + Q+H V++ G Y+K+ +++ F++ P++
Sbjct: 22 LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSS 81
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
+W+++IS AQ P ++ K+M RP+D + A +C+ L G VH
Sbjct: 82 TTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCL 141
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
+ D +V V ++++DMY+KCG + A +F M ++++TW+ M+ +A G+ +
Sbjct: 142 SMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGMMYGYAQMGENEE 200
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVD 352
AL L + + + + S+ + + C ++ L+E G ++ L S + S+V
Sbjct: 201 ALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVS 260
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVE-MAEMASR-KLVEMGSNSC 410
L + G + AY N +P + ++ +W ++L A + + + + E+ R KL M N
Sbjct: 261 LYSKCGVPEGAYQVFNEVP-VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPN-- 317
Query: 411 GDFVLLSNVYAA 422
F+ NV A
Sbjct: 318 --FITFLNVLNA 327
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 349 bits (895), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 191/526 (36%), Positives = 301/526 (57%), Gaps = 8/526 (1%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQP-TQAISWYRSVSRSPQKVDALTCSFALKGCARA 119
+IF + WN+++ LA S + +A+ + + R+ QK++ +T S L +
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 120 LTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP-KRDIASWNAM 178
QIH L+ Y K G++D +K+F M +RD +WN+M
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
ISG +A+ L M + G R + LSA + + L++G VH V L
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 650
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
+ +V+V +A++DMYSKCG +D A F M S +WN+MI +A +G G +AL L +
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY-SWNSMISGYARHGQGEEALKLFE 709
Query: 299 QMALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGR 356
M LDG PD V+++ L AC+HAGL+EEG + F+ M S + P ++H+ + D+LGR
Sbjct: 710 TMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGAS-KTYG-NVEMAEMASRKLVEMGSNSCGDFV 414
AG + + D I MPM P+V++W+++LGA + G E+ + A+ L ++ + ++V
Sbjct: 770 AGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYV 829
Query: 415 LLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYA 474
LL N+YAA RW D+ + R+ M DV+K G+S+ + +H F+ GD+SHP+ IY
Sbjct: 830 LLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYK 889
Query: 475 KMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGT-PIQVI 533
K+ E+ +++ GY +T L+D+ +E+K+ L+YHSEKLAVA+ L + + T PI+++
Sbjct: 890 KLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIM 949
Query: 534 KNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
KNLR+CGDCH+ K IS I R+II+RD RF F+ G CSC D+W
Sbjct: 950 KNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 120/242 (49%), Gaps = 6/242 (2%)
Query: 49 AISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSR----SPQKV 104
A + + LS+A ++F +++ + N ++ GL +A + ++ SP+
Sbjct: 252 AFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESY 311
Query: 105 DALTCSFALKGCARALTFSEATQIHSQVLRFGF-DAXXXXXXXXXXXYAKTGDLDAAQKV 163
L SF A + + ++H V+ G D YAK G + A++V
Sbjct: 312 VILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 164 FDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGAL 223
F M +D SWN+MI+GL Q EA+ +K M+ P T++ +LS+C+ L
Sbjct: 372 FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 224 KQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
K G+ +HG + +D+NV V NA++ +Y++ G++++ +F +M ++WN++I A
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Query: 284 FA 285
A
Sbjct: 491 LA 492
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 16/288 (5%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
HS++ + D Y +TGD +A+KVFDEMP R+ SW ++SG ++
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ--GEIVHGYIVDEKLDMNVIVC 245
EA+ + M +EG N + L AC ++G++ G +HG + ++ +V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 246 NAVIDMYSKC-GFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG 304
N +I MY KC G V A F ++ K+ ++WN++I ++ GD A + M DG
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIE-VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 305 VHPDAVSYLAAL-CACNHAGLVEEGVRLFDLMKGSVVKPNM---KHYGS-VVDLLGRAGR 359
P ++ + + AC+ L E VRL + + ++ K + GS +V ++G
Sbjct: 202 SRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 360 IKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS 407
+ A N M V L ++G + + E A++ ++M S
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQ----KWGEEATKLFMDMNS 302
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 285/528 (53%), Gaps = 11/528 (2%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAIS-----WYRSVSRSPQKVDALTCSFAL 113
A ++F + WN+++ G + + V P +V L+ +
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLS---MI 141
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
C + E IH V++FG Y KTGDL ++ K+F+++ +++
Sbjct: 142 SACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLV 201
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
SWN MI Q + +A F + G P+ T L L +C +G ++ + +HG I
Sbjct: 202 SWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLI 261
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ N + A++D+YSK G ++ + +VF ++ S+ W M+ A+A +G G A
Sbjct: 262 MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSM-AWTAMLAAYATHGFGRDA 320
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVD 352
+ + M G+ PD V++ L AC+H+GLVEEG F+ M K + P + HY +VD
Sbjct: 321 IKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVD 380
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGD 412
LLGR+G +++AY I MPM P +W +LLGA + Y + ++ A+ +L E+ +
Sbjct: 381 LLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRN 440
Query: 413 FVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEI 472
+V+LSN+Y+A W D R+R M K + + G SY E KIHKF+ GD SHP ++I
Sbjct: 441 YVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKI 500
Query: 473 YAKMDEIKFRIKA-YGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQ 531
K+ EI+ ++K+ GY +KT+ VLHD+GE+ K+ +N HSEK+A+A+GL+ PI
Sbjct: 501 QKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPII 560
Query: 532 VIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+ KNLRICGDCH K IS I R II+RD RF F G CSC DYW
Sbjct: 561 IRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 129/242 (53%), Gaps = 4/242 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM--KEEGWRPNDV 208
Y + G A+K+FDEMP+RD+ SWN++ISG + + + RM E G+RPN+V
Sbjct: 76 YLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEV 135
Query: 209 TVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
T L +SAC G+ ++G +HG ++ + V V NA I+ Y K G + + +F+++
Sbjct: 136 TFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDL 195
Query: 269 SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG 328
S K+L++WNTMI+ NG K L + G PD ++LA L +C G+V
Sbjct: 196 S-IKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254
Query: 329 VRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKT 388
+ L+ N +++DL + GR++++ + + PD + W ++L A T
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS-PDSMAWTAMLAAYAT 313
Query: 389 YG 390
+G
Sbjct: 314 HG 315
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 124/292 (42%), Gaps = 16/292 (5%)
Query: 53 AADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFA 112
DL+ + ++F + + WN ++ + + ++++ R + D T
Sbjct: 182 TGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAV 241
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L+ C A IH ++ GF Y+K G L+ + VF E+ D
Sbjct: 242 LRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDS 301
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE----- 227
+W AM++ A +AI F+ M G P+ VT L+ACS G +++G+
Sbjct: 302 MAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFET 361
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
+ Y +D +LD + ++D+ + G + AY + + M S W ++ A +
Sbjct: 362 MSKRYRIDPRLDHY----SCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVY 417
Query: 288 GD---GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMK 336
D G KA + L ++ D +Y+ + +GL ++ R+ +LMK
Sbjct: 418 KDTQLGTKAAERLFELE----PRDGRNYVMLSNIYSASGLWKDASRIRNLMK 465
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 292/522 (55%), Gaps = 4/522 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A + R++ A++ G + + T+A+ ++S+ + + T + L C
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
IH +++ GF++ Y + +D + +VF + + SW ++
Sbjct: 280 LKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSL 339
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
ISGL Q R A+ F++M + +PN T+ AL CS L ++G +HG +
Sbjct: 340 ISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF 399
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
D + + +ID+Y KCG D A VF +S +I+ NTMI ++A NG G +ALDL +
Sbjct: 400 DRDKYAGSGLIDLYGKCGCSDMARLVFDTLS-EVDVISLNTMIYSYAQNGFGREALDLFE 458
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
+M G+ P+ V+ L+ L ACN++ LVEEG LFD + + HY +VDLLGRAG
Sbjct: 459 RMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAG 518
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSN 418
R++EA + + + + PD+VLW++LL A K + VEMAE +RK++E+ G +L+SN
Sbjct: 519 RLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSN 577
Query: 419 VYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQ-SHPNWKEIYAKMD 477
+YA+ +W+ V ++ M ++K P S+ EI+ + H F+ GD SHPN ++I ++
Sbjct: 578 LYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLE 637
Query: 478 EIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLR 537
E+ + K GY V D+ E K+ +L+ HSEKLA+A+ + V G+ I+++KNLR
Sbjct: 638 ELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLR 696
Query: 538 ICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+C DCH+ IKI+S + REII RD RF F+ G CSCGDYW
Sbjct: 697 VCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 167/364 (45%), Gaps = 16/364 (4%)
Query: 18 SLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAV 77
S+ IK +QAH++ +G F S +KL++ A D+ +A Q+F + WN++
Sbjct: 80 SISGIKTIQAHMLKSG-FPAEISGSKLVD--ASLKCGDIDYARQVFDGMSERHIVTWNSL 136
Query: 78 LRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGF 137
+ L + +A+ YR + + D T S K + EA + H + G
Sbjct: 137 IAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGL 196
Query: 138 D-AXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFK 196
+ + Y K G A+ V D + ++D+ A+I G +Q EA+ F+
Sbjct: 197 EVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQ 256
Query: 197 RMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCG 256
M E +PN+ T L +C L + G+++HG +V + + +++ MY +C
Sbjct: 257 SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 257 FVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
VD + VF+ + ++W ++I NG AL +M D + P++ + +AL
Sbjct: 317 LVDDSLRVFKCIEYPNQ-VSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSAL 375
Query: 317 CACNHAGLVEEGVRLFDLMKGSVVKPNM---KHYGS-VVDLLGRAG---RIKEAYDTINS 369
C++ + EEG ++ G V K K+ GS ++DL G+ G + +DT++
Sbjct: 376 RGCSNLAMFEEGRQI----HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSE 431
Query: 370 MPML 373
+ ++
Sbjct: 432 VDVI 435
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 3/261 (1%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
K + ++ +G S+T LL + D S ++F+ I+ P+ W +++ GL
Sbjct: 287 KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL--RVFKCIEYPNQVSWTSLISGLV 344
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
+ + A+ +R + R K ++ T S AL+GC+ F E QIH V ++GFD
Sbjct: 345 QNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKY 404
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
Y K G D A+ VFD + + D+ S N MI AQ EA+ LF+RM G
Sbjct: 405 AGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLG 464
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
+PNDVTVL L AC+ +++G + +K+ + ++D+ + G +++A
Sbjct: 465 LQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEA- 523
Query: 263 SVFQNMSCTKSLITWNTMIMA 283
+ L+ W T++ A
Sbjct: 524 EMLTTEVINPDLVLWRTLLSA 544
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 318/602 (52%), Gaps = 49/602 (8%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRI--QNPSTNDWNAVLRG 80
K+L A L T+G S + + ++ A ++F I DW +L
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSS 85
Query: 81 LAMSPQPTQAISWYRSVSRSPQKVD--ALTCSFALKGCARALTFSEATQIHSQVLRFGFD 138
+ ++ + + R ++D ++ C F + CA+ A Q H ++ G
Sbjct: 86 FSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGV--CAKLEDLGFAQQGHGVAVKMGVL 143
Query: 139 AXXXXXXXXXXXYAKTG-------------------------------DLDAAQKVFDEM 167
Y K G L+ ++VF EM
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 168 PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEE-GWRPNDVTVLGALSACSQLGALKQG 226
P+R+ +W M++G E + L M G N VT+ LSAC+Q G L G
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 227 EIVHGYIVDEKLDM-------NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNT 279
VH Y + +++ M +V+V A++DMY+KCG +D + +VF+ M ++++TWN
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNA 322
Query: 280 MIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV 339
+ AM+G G +D+ QM + V PD +++ A L AC+H+G+V+EG R F ++
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYG 381
Query: 340 VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMAS 399
++P + HY +VDLLGRAG I+EA + MP+ P+ V+ SLLG+ +G VE+AE
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIK 441
Query: 400 RKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKF 459
R+L++M + +L+SN+Y A R +R ++ + +RK+PG S ++ +H+F
Sbjct: 442 RELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRF 501
Query: 460 INGDQSHPNWKEIYAKMDEIKFRIKAYGYTAK-TDLVLHDIGE-EDKDNALNYHSEKLAV 517
+GD+SHP KEIY K++E+ RI++ GY + LV H G+ E+K+ AL HSEKLAV
Sbjct: 502 SSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAV 561
Query: 518 AYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGD 577
+GL+ T TP+ V KNLRIC DCH+ +KI+S +Y+REII+RDR RF +FKGG CSC D
Sbjct: 562 CFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSD 621
Query: 578 YW 579
YW
Sbjct: 622 YW 623
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 294/525 (56%), Gaps = 6/525 (1%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALT-CSFALKGCA 117
A ++F I + WNA + +P +AI + R +++T C+F L C+
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAF-LNACS 220
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
L + Q+H VLR GFD Y K + +++ +F EM ++ SW +
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCS 280
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+++ Q +A L+ R +++ +D + LSAC+ + L+ G +H + V
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC 340
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
++ + V +A++DMY KCG ++ + F M K+L+T N++I +A G AL L
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 298 DQMALDGV--HPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLL 354
++MA G P+ +++++ L AC+ AG VE G+++FD M+ + ++P +HY +VD+L
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Query: 355 GRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFV 414
GRAG ++ AY+ I MP+ P + +W +L A + +G ++ +A+ L ++ G+ V
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 519
Query: 415 LLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYA 474
LLSN +AA RW + VRE + ++K G+S+ + ++H F D+SH KEI
Sbjct: 520 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 579
Query: 475 KMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIK 534
+ +++ ++A GY L L+D+ EE+K +++HSEKLA+A+GL+S PI++ K
Sbjct: 580 TLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITK 639
Query: 535 NLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
NLRICGDCH+ K +S REIIVRD RF RFK G+CSC DYW
Sbjct: 640 NLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 167/369 (45%), Gaps = 5/369 (1%)
Query: 59 AAQIFRRIQNPSTN--DWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGC 116
+A++ R+ P+ N W +++ GLA + + A+ + + R + T A K
Sbjct: 60 SARLVLRL-TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAV 118
Query: 117 ARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWN 176
A QIH+ ++ G Y KT D A+K+FDE+P+R++ +WN
Sbjct: 119 ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWN 178
Query: 177 AMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDE 236
A IS RP EAI F + PN +T L+ACS L G +HG ++
Sbjct: 179 AFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS 238
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDL 296
D +V VCN +ID Y KC + + +F M TK+ ++W +++ A+ N + KA L
Sbjct: 239 GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG-TKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 297 LDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGR 356
+ D V + L AC +E G + + V+ + ++VD+ G+
Sbjct: 298 YLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGK 357
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLL 416
G I+++ + MP ++V SL+G G V+MA ++ G +++
Sbjct: 358 CGCIEDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 417 SNVYAARQR 425
++ +A R
Sbjct: 417 VSLLSACSR 425
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 4/236 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y+K ++A+ V P R++ SW ++ISGLAQ + A+ F M+ EG PND T
Sbjct: 52 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 111
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
A A + L G+ +H V ++V V + DMY K D A +F +
Sbjct: 112 PCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP- 170
Query: 271 TKSLITWNTMIMAFAMNGDGYKALD-LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
++L TWN I +G +A++ ++ +DG HP+++++ A L AC+ + G+
Sbjct: 171 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNACSDWLHLNLGM 229
Query: 330 RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+L L+ S ++ ++D G+ +I+ + M + V W SL+ A
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT-KNAVSWCSLVAA 284
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 175/456 (38%), Positives = 268/456 (58%), Gaps = 2/456 (0%)
Query: 125 ATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQ 184
A Q+HS+++RFGF+A Y K G + AQ+VFD+ ++I ++ Q
Sbjct: 256 ALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQ 315
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
EA+ LF +M + PN+ T L++ ++L LKQG+++HG ++ +V+V
Sbjct: 316 DKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMV 375
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG 304
NA+++MY+K G ++ A F M+ + ++TWNTMI + +G G +AL+ D+M G
Sbjct: 376 GNALVNMYAKSGSIEDARKAFSGMT-FRDIVTWNTMISGCSHHGLGREALEAFDRMIFTG 434
Query: 305 VHPDAVSYLAALCACNHAGLVEEGVRLFD-LMKGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
P+ ++++ L AC+H G VE+G+ F+ LMK V+P+++HY +V LL +AG K+A
Sbjct: 435 EIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDA 494
Query: 364 YDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAAR 423
D + + P+ DVV W++LL A N + + + +E N G +VLLSN++A
Sbjct: 495 EDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKS 554
Query: 424 QRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRI 483
+ W V +VR M + V+K PG S+ I + H F+ D HP IYAK+ E+ +I
Sbjct: 555 REWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKI 614
Query: 484 KAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCH 543
K GY+ HD+ EE +++ L+YHSEKLAVAYGLI T +P+ V KN+RIC DCH
Sbjct: 615 KPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCH 674
Query: 544 TVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+ IK+IS I R I++RD RF F G CSC DYW
Sbjct: 675 SAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 153/338 (45%), Gaps = 13/338 (3%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQ-KVDALTCSFALKGCA 117
A ++F + + W A+++G S + + ++S+ S + + + + K C+
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
+ E Q H L++G + Y+ A +V D++P D++ +++
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+SG + E + + ++ E + N++T L +L S L L VH +V
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFG 267
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM-AFAMNGDGYKALDL 296
+ V C A+I+MY KCG V A VF + I NT IM A+ + +AL+L
Sbjct: 268 FNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQN--IFLNTTIMDAYFQDKSFEEALNL 325
Query: 297 LDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY----GSVVD 352
+M V P+ ++ L + L+++G DL+ G V+K +++ ++V+
Sbjct: 326 FSKMDTKEVPPNEYTFAILLNSIAELSLLKQG----DLLHGLVLKSGYRNHVMVGNALVN 381
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ ++G I++A + M D+V W +++ +G
Sbjct: 382 MYAKSGSIEDARKAFSGMT-FRDIVTWNTMISGCSHHG 418
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 89 QAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXX 148
+A++ + + + T + L A + +H VL+ G+
Sbjct: 321 EALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALV 380
Query: 149 XXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDV 208
YAK+G ++ A+K F M RDI +WN MISG + EA+ F RM G PN +
Sbjct: 381 NMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRI 440
Query: 209 TVLGALSACSQLGALKQGEIVHGYIV---DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVF 265
T +G L ACS +G ++QG ++ D + D+ C ++ + SK G A
Sbjct: 441 TFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTC--IVGLLSKAGMFKDAEDFM 498
Query: 266 QNMSCTKSLITWNTMIMA 283
+ ++ W T++ A
Sbjct: 499 RTAPIEWDVVAWRTLLNA 516
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 102/211 (48%), Gaps = 2/211 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW-RPNDVT 209
Y K + A+K+FD MP+R++ SW AM+ G E + LFK M G RPN+
Sbjct: 79 YVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFV 138
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
+CS G +++G+ HG + L + V N ++ MYS C +A V ++
Sbjct: 139 ATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP 198
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
L +++ + + G + LD+L + A + + ++YL++L ++ + +
Sbjct: 199 YC-DLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLAL 257
Query: 330 RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
++ M ++ G+++++ G+ G++
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKV 288
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/528 (33%), Positives = 297/528 (56%), Gaps = 3/528 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
++S + ++ ++ WNA++ G A P +A++ ++++ + +T L
Sbjct: 411 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 470
Query: 114 KGCARALTFSE-ATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
C E +H+ ++ GF++ YAK GDL ++Q +F+ + R+I
Sbjct: 471 SACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNI 530
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
+WNAM++ A E + L +M+ G + + LSA ++L L++G+ +HG
Sbjct: 531 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 590
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
V + + + NA DMYSKCG + + + S +SL +WN +I A +G +
Sbjct: 591 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFEE 649
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVV 351
+M G+ P V++++ L AC+H GLV++G+ +D++ ++P ++H V+
Sbjct: 650 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 709
Query: 352 DLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCG 411
DLLGR+GR+ EA I+ MPM P+ ++W+SLL + K +GN++ A+ L ++
Sbjct: 710 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 769
Query: 412 DFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKE 471
+VL SN++A RW DV+ VR+ M K+++K S+ ++ K+ F GD++HP E
Sbjct: 770 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 829
Query: 472 IYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQ 531
IYAK+++IK IK GY A T L D EE K++ L HSE+LA+AY L+ST G+ ++
Sbjct: 830 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVR 889
Query: 532 VIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+ KNLRIC DCH+V K +S + R I++RD+ RF F+ G+CSC DYW
Sbjct: 890 IFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F+++ WN+++ + A+ S+ S + V+ +T + AL C
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
F + +H V+ G Y K G++ +++V +MP+RD+ +WNA+
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG-ALKQGEIVHGYIVDEK 237
I G A+ P++A+A F+ M+ EG N +TV+ LSAC G L++G+ +H YIV
Sbjct: 435 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
+ + V N++I MY+KCG + + +F + +++ITWN M+ A A +G G + L L+
Sbjct: 495 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLV 553
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH----YGSVVDL 353
+M GV D S+ L A ++EEG +L G VK +H + + D+
Sbjct: 554 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL----HGLAVKLGFEHDSFIFNAAADM 609
Query: 354 LGRAGRIKEAYDTINSMPMLPDVV-----LWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ G I E + MLP V W L+ A +G E +++EMG
Sbjct: 610 YSKCGEIGEV------VKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 661
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 153/330 (46%), Gaps = 2/330 (0%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
+S + ++F + + + W +++ G + +P + I Y+ + + + S +
Sbjct: 110 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 169
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
C S QI QV++ G ++ G++D A +FD+M +RD SW
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 229
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
N++ + AQ E+ +F M+ N TV LS + K G +HG +V
Sbjct: 230 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 289
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
D V VCN ++ MY+ G +A VF+ M TK LI+WN+++ +F +G AL
Sbjct: 290 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASFVNDGRSLDALG 348
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLG 355
LL M G + V++ +AL AC E+G L L+ S + N ++V + G
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 408
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+ G + E+ + MP DVV W +L+G
Sbjct: 409 KIGEMSESRRVLLQMPR-RDVVAWNALIGG 437
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 19/327 (5%)
Query: 69 PSTND--WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT-FSEA 125
P N+ WN ++ G+ + + ++R + K + + + C R+ + F E
Sbjct: 19 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 78
Query: 126 TQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQG 185
Q+H V + G + Y G + ++KVF+EMP R++ SW +++ G +
Sbjct: 79 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 138
Query: 186 SRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVC 245
P E I ++K M+ EG N+ ++ +S+C L G + G +V L+ + V
Sbjct: 139 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198
Query: 246 NAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG---DGYKALDLLDQMAL 302
N++I M G VD A +F MS + I+WN++ A+A NG + ++ L+ +
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH- 256
Query: 303 DGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGR----AG 358
D V+ VS L L H + G + G VVK V + L R AG
Sbjct: 257 DEVNSTTVSTL--LSVLGHVDHQKWGRGI----HGLVVKMGFDSVVCVCNTLLRMYAGAG 310
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLLGA 385
R EA MP D++ W SL+ +
Sbjct: 311 RSVEANLVFKQMPT-KDLISWNSLMAS 336
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 127/248 (51%), Gaps = 11/248 (4%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y K G + A+ +FD MP R+ SWN M+SG+ + E + F++M + G +P+ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 211 LGALSACSQLGAL-KQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
++AC + G++ ++G VHG++ L +V V A++ +Y G V + VF+ M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
+++++W ++++ ++ G+ + +D+ M +GV + S + +C GL+++
Sbjct: 122 -DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDE- 176
Query: 330 RLFDLMKGSVVKPNMKH----YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
L + G VVK ++ S++ +LG G + A + M D + W S+ A
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAA 235
Query: 386 SKTYGNVE 393
G++E
Sbjct: 236 YAQNGHIE 243
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 334 bits (857), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 180/528 (34%), Positives = 294/528 (55%), Gaps = 3/528 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
D+ A +F ++ T WN+++ G S +A+ ++ + ++ D +T +
Sbjct: 356 GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
R +HS ++ G YAK G++ + K+F M D
Sbjct: 416 SVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV 475
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
+WN +IS + + + +M++ P+ T L L C+ L A + G+ +H +
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL 535
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ + + + NA+I+MYSKCG ++ + VF+ MS + ++TW MI A+ M G+G KA
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKA 594
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVD 352
L+ M G+ PD+V ++A + AC+H+GLV+EG+ F+ MK + P ++HY VVD
Sbjct: 595 LETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGD 412
LL R+ +I +A + I +MP+ PD +W S+L A +T G++E AE SR+++E+ + G
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGY 714
Query: 413 FVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEI 472
+L SN YAA ++W V +R+++ K + K PG+S+ E+ +H F +GD S P + I
Sbjct: 715 SILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAI 774
Query: 473 YAKMDEIKFRIKAYGYTAKTDLVLHDI-GEEDKDNALNYHSEKLAVAYGLISTVNGTPIQ 531
Y ++ + + GY V ++ EE+K + HSE+LA+A+GL++T GTP+Q
Sbjct: 775 YKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQ 834
Query: 532 VIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
V+KNLR+CGDCH V K+IS I REI+VRD RF FK G CSC D W
Sbjct: 835 VMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 175/364 (48%), Gaps = 30/364 (8%)
Query: 52 PAADLSFAAQIFRRIQNPSTND--WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTC 109
PA+ LS +FRR+ +P+ N WN+++R + + +A+ +Y + S D T
Sbjct: 55 PASSLS----VFRRV-SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTF 109
Query: 110 SFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
+K CA ++ Q+L GF++ Y++ G L A++VFDEMP
Sbjct: 110 PSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV 169
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
RD+ SWN++ISG + EA+ ++ +K P+ TV L A L +KQG+ +
Sbjct: 170 RDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 230 HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
HG+ + ++ V+V N ++ MY K A VF M S +++NTMI
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS-VSYNTMIC------- 281
Query: 290 GYKALDLLDQMA------LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM--KGSVVK 341
GY L+++++ LD PD ++ + L AC H + +++ M G V++
Sbjct: 282 GYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLE 341
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRK 401
+++ ++D+ + G + A D NSM D V W S++ G++ M + K
Sbjct: 342 STVRNI--LIDVYAKCGDMITARDVFNSME-CKDTVSWNSIISGYIQSGDL----MEAMK 394
Query: 402 LVEM 405
L +M
Sbjct: 395 LFKM 398
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 2/293 (0%)
Query: 103 KVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQK 162
K D LT S L+ C S A I++ +L+ GF YAK GD+ A+
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 163 VFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGA 222
VF+ M +D SWN++ISG Q EA+ LFK M + + +T L +S ++L
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 223 LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
LK G+ +H + + +++ V NA+IDMY+KCG V + +F +M T +TWNT+I
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVIS 482
Query: 283 AFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKP 342
A GD L + QM V PD ++L L C G + + +
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 343 NMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
++ +++++ + G ++ + M DVV W ++ A YG E A
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSR-RDVVTWTGMIYAYGMYGEGEKA 594
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 22/192 (11%)
Query: 213 ALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK 272
ALS+ S L L++ +H ++ LD + +ID YS + SVF+ +S K
Sbjct: 13 ALSSSSNLNELRR---IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 273 SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF 332
++ WN++I AF+ NG +AL+ ++ V PD ++ + + AC AG LF
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AG-------LF 120
Query: 333 DLMKGSVVKPNMKHYG---------SVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
D G +V + G ++VD+ R G + A + MP + D+V W SL+
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP-VRDLVSWNSLI 179
Query: 384 GASKTYGNVEMA 395
++G E A
Sbjct: 180 SGYSSHGYYEEA 191
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 294/538 (54%), Gaps = 10/538 (1%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRS--PQKVDALT 108
S ++ A ++FRRI + S WNA++ G + ++A+ + + + ++ D T
Sbjct: 153 SKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFT 212
Query: 109 CSFALKGCARALTFSEATQIHSQVLRFGFD--AXXXXXXXXXXXYAKTGDLDAAQKVFDE 166
+ LK C+ QIH ++R GF + Y K G L +A+K FD+
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 272
Query: 167 MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG 226
+ ++ + SW+++I G AQ EA+ LFKR++E + + + + + L+QG
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 227 EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAM 286
+ + V + V N+V+DMY KCG VD+A F M K +I+W +I +
Sbjct: 333 KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQ-LKDVISWTVVITGYGK 391
Query: 287 NGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFD-LMKGSVVKPNMK 345
+G G K++ + +M + PD V YLA L AC+H+G+++EG LF L++ +KP ++
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 346 HYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
HY VVDLLGRAGR+KEA I++MP+ P+V +WQ+LL + +G++E+ + + L+ +
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511
Query: 406 GSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQS 465
+ + ++V++SN+Y W++ RE K ++K G S+ EI+ ++H F +G+ S
Sbjct: 512 DAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDS 571
Query: 466 HPNWKEIYAKMDEIKFRIK-AYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLIS- 523
HP I + E + R++ GY LHDI +E K+ L HSEKLA+ L +
Sbjct: 572 HPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATG 631
Query: 524 --TVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
G I+V KNLR+C DCH IK +S I +VRD RF F+ G CSCGDYW
Sbjct: 632 GLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 148/303 (48%), Gaps = 12/303 (3%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L+ C R + Q+H +L+ G Y K + A KVFD MP+R++
Sbjct: 13 LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
SW+A++SG +++LF M +G PN+ T L AC L AL++G +HG+
Sbjct: 73 VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF 132
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
+ +M V V N+++DMYSKCG +++A VF+ + +SLI+WN MI F G G K
Sbjct: 133 CLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAGFVHAGYGSK 191
Query: 293 ALDLLDQMALDGV--HPDAVSYLAALCACNHAGLVEEGVRL--FDLMKGSVVKPNMKHYG 348
ALD M + PD + + L AC+ G++ G ++ F + G + G
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 349 SVVDLLGRAGRI---KEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
S+VDL + G + ++A+D I M+ W SL+ G A ++L E+
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMIS----WSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 406 GSN 408
S
Sbjct: 308 NSQ 310
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 160/351 (45%), Gaps = 9/351 (2%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F + + W+A++ G ++ ++S + + R + T S LK C
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+ QIH L+ GF+ Y+K G ++ A+KVF + R + SWNAM
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGW--RPNDVTVLGALSACSQLGALKQGEIVHGYIVDE 236
I+G ++A+ F M+E RP++ T+ L ACS G + G+ +HG++V
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 237 KLDM--NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
+ + +++D+Y KCG++ A F + K++I+W+++I+ +A G+ +A+
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLILGYAQEGEFVEAM 298
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
L ++ D+ + + + L+ +G ++ L SVVD+
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 355 GRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
+ G + EA M L DV+ W ++ YG + + + R EM
Sbjct: 359 LKCGLVDEAEKCFAEMQ-LKDVISWTVVITG---YGKHGLGKKSVRIFYEM 405
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 204 RPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYS 263
R N V++L C++ G QG VH Y++ +N+I N +IDMY KC AY
Sbjct: 6 RQNLVSIL---RVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 264 VFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAG 323
VF +M +++++W+ ++ +NGD +L L +M G++P+ ++ L AC
Sbjct: 63 VFDSMP-ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 324 LVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
+E+G+++ + ++ S+VD+ + GRI EA
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 161
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 331 bits (849), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 207/602 (34%), Positives = 306/602 (50%), Gaps = 41/602 (6%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
R +L K L AH++ G P L+ + AA S A Q+F + + W
Sbjct: 15 RNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAA--SHALQVFDEMPHRDHIAW 72
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQ-KVDALTCSFALKGCARALTFSEATQIHSQVL 133
+VL L + + +S + SV S + D S +K CA + Q+H +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ YAK G L++A+ VFD + ++ SW AM+SG A+ R EA+
Sbjct: 133 VSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALE 192
Query: 194 LFK-------------------------------RMKEEGWRPNDVTVLGAL-SACSQLG 221
LF+ M+ E D VL ++ AC+ L
Sbjct: 193 LFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLA 252
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
A G VHG ++ D V + NA+IDMY+KC V A +F M + +++W ++I
Sbjct: 253 ASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR-HRDVVSWTSLI 311
Query: 282 MAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVV 340
+ A +G KAL L D M GV P+ V+++ + AC+H G VE+G LF M K +
Sbjct: 312 VGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGI 371
Query: 341 KPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA-EMAS 399
+P+++HY ++DLLGR+G + EA + I++MP PD W +LL A K G +M +A
Sbjct: 372 RPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIAD 431
Query: 400 RKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKF 459
+ ++LLSN+YA+ W V R + +VRK PG S E+ + F
Sbjct: 432 HLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVF 491
Query: 460 INGDQSHPNWKEIY--AKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAV 517
G+ SHP ++I+ K E + RI+ GY T +LHD+ E++K+ L +HSE+ AV
Sbjct: 492 YAGETSHPLKEDIFRLLKKLEEEMRIRN-GYVPDTSWILHDMDEQEKEKLLFWHSERSAV 550
Query: 518 AYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGD 577
AYGL+ V GTPI+++KNLR+CGDCH V+K IS I REIIVRD R+ FKGG CSC D
Sbjct: 551 AYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCND 610
Query: 578 YW 579
+W
Sbjct: 611 FW 612
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 114/225 (50%), Gaps = 6/225 (2%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L+ CAR T + A +H+ +++ G Y K G A +VFDEMP RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEG-WRPNDVTVLGALSACSQLGALKQGEIVHG 231
+W ++++ L Q + + +++F + RP+D + AC+ LG++ G VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGY 291
+ + + + +V ++++DMY+KCG ++ A +VF ++ K+ I+W M+ +A +G
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR-VKNTISWTAMVSGYAKSGRKE 188
Query: 292 KALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMK 336
+AL+L + + ++ S+ A + +G E +F M+
Sbjct: 189 EALELFRILPVKNLY----SWTALISGFVQSGKGLEAFSVFTEMR 229
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/515 (35%), Positives = 288/515 (55%), Gaps = 10/515 (1%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
WN+++ + +A++ Y+ + K+D T + L Q H +++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDA---AQKVFDEMPKRDIASWNAMISGLAQGSR-PN 189
+ GF Y+K G D ++KVF E+ D+ WN MISG +
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVI-VCNAV 248
EA+ F++M+ G RP+D + + SACS L + Q + +HG + + N I V NA+
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 249 IDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPD 308
I +Y K G + A VF M + +++N MI +A +G G +AL L +M G+ P+
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNA-VSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPN 446
Query: 309 AVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTI 367
++++A L AC H G V+EG F+ MK + ++P +HY ++DLLGRAG+++EA I
Sbjct: 447 KITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFI 506
Query: 368 NSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWH 427
++MP P V W +LLGA + + N+ +AE A+ +L+ M + +V+L+N+YA ++W
Sbjct: 507 DAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWE 566
Query: 428 DVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYG 487
++ VR++M K +RK PG S+ E+ K H F+ D SHP +E+ ++E+ ++K G
Sbjct: 567 EMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVG 626
Query: 488 YTAKTDLVLHDIGEEDKDNA---LNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHT 544
Y + E + + L +HSEKLAVA+GL+ST +G + V+KNLRICGDCH
Sbjct: 627 YVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHN 686
Query: 545 VIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
IK +S + REIIVRD RF FK G CSCGDYW
Sbjct: 687 AIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 171/364 (46%), Gaps = 10/364 (2%)
Query: 49 AISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALT 108
A + + + A Q+F I P T +N ++ G A + + A+ ++ + + +VD T
Sbjct: 83 AYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFT 142
Query: 109 CSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP 168
S + C + + Q+H + GFD+ Y+K G L A VF M
Sbjct: 143 LSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 169 K-RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE 227
+ RD SWN+MI Q +A+AL+K M +G++ + T+ L+A + L L G
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY---SVFQNMSCTKSLITWNTMIMAF 284
HG ++ N V + +ID YSKCG D Y VFQ + + L+ WNTMI +
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMISGY 319
Query: 285 AMNGD-GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDL-MKGSVVKP 342
+MN + +A+ QM G PD S++ AC++ + ++ L +K +
Sbjct: 320 SMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSN 379
Query: 343 NMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKL 402
+ +++ L ++G +++A + MP L + V + ++ +G+ A + +++
Sbjct: 380 RISVNNALISLYYKSGNLQDARWVFDRMPEL-NAVSFNCMIKGYAQHGHGTEALLLYQRM 438
Query: 403 VEMG 406
++ G
Sbjct: 439 LDSG 442
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 53/296 (17%)
Query: 151 YAKTGDLD-------------------------------AAQKVFDEMPKRDIASWNAMI 179
Y+K G L A+++FDE+P+ D S+N +I
Sbjct: 53 YSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLI 112
Query: 180 SGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSA-CSQLGALKQGEIVHGYIVDEKL 238
SG A A+ LFKRM++ G+ + T+ G ++A C ++ +KQ +H + V
Sbjct: 113 SGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQ---LHCFSVSGGF 169
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
D V NA + YSK G + +A SVF M + ++WN+MI+A+ + +G KAL L
Sbjct: 170 DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYK 229
Query: 299 QMALDGVHPDA---VSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNM---KHYGS-VV 351
+M G D S L AL + +H L+ G R F G ++K H GS ++
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDH--LI--GGRQF---HGKLIKAGFHQNSHVGSGLI 282
Query: 352 DLLGRAGRIKEAYDT--INSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
D + G YD+ + + PD+V+W +++ N E++E A + +M
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM--NEELSEEAVKSFRQM 336
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 303/555 (54%), Gaps = 5/555 (0%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
+ + A++ITTG F S L ++ A A ++F R++ W ++ G
Sbjct: 317 RDIHAYVITTG-FAVDISVCNSLTQMYLN-AGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
+ P +AI YR + + K D +T + L CA ++H ++ +
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
Y+K +D A +F +P++++ SW ++I+GL +R EA+ ++MK
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT- 493
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
+PN +T+ AL+AC+++GAL G+ +H +++ + ++ + NA++DMY +CG ++ A+
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAW 553
Query: 263 SVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHA 322
S F S K + +WN ++ ++ G G ++L D+M V PD +++++ LC C+ +
Sbjct: 554 SQFN--SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKS 611
Query: 323 GLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSL 382
+V +G+ F M+ V PN+KHY VVDLLGRAG ++EA+ I MP+ PD +W +L
Sbjct: 612 QMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 671
Query: 383 LGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVR 442
L A + + +++ E++++ + E+ S G ++LL N+YA +W +V +VR M +
Sbjct: 672 LNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 731
Query: 443 KVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEE 502
G S+ E+ K+H F++ D+ HP KEI ++ ++ G T ++ D E
Sbjct: 732 VDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEI 791
Query: 503 DKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDR 562
+D HSE+ A+A+GLI+TV G PI V KNL +C +CH +K IS REI VRD
Sbjct: 792 SRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDA 851
Query: 563 ARFGRFKGGVCSCGD 577
F FK G CSCGD
Sbjct: 852 EHFHHFKDGECSCGD 866
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 161/337 (47%), Gaps = 11/337 (3%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWY-RSVSRSPQKVDALTCSFA 112
+L A +F ++ + WN ++ G A +A+ Y R + K D T
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L+ C + ++H V+R+G++ Y K GD+ +A+ +FD MP+RDI
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
SWNAMISG + +E + LF M+ P+ +T+ +SAC LG + G +H Y
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
++ +++ VCN++ MY G +A +F M K +++W TMI + N K
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTMISGYEYNFLPDK 381
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY----G 348
A+D M D V PD ++ A L AC G ++ GV L L +K + Y
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL----AIKARLISYVIVAN 437
Query: 349 SVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+++++ + I +A D +++P +V+ W S++
Sbjct: 438 NLINMYSKCKCIDKALDIFHNIPR-KNVISWTSIIAG 473
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 138/309 (44%), Gaps = 3/309 (0%)
Query: 78 LRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGF 137
L GL + + +A+ S+ VD ++ C E ++++S L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 138 DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKR 197
+ + G+L A VF +M +R++ SWN ++ G A+ +EA+ L+ R
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 198 MK-EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCG 256
M G +P+ T L C + L +G+ VH ++V ++++ V NA+I MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 257 FVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
V A +F M + +I+WN MI + NG ++ L+L M V PD ++ + +
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 317 CACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDV 376
AC G G + + + ++ S+ + AG +EA + M D+
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER-KDI 363
Query: 377 VLWQSLLGA 385
V W +++
Sbjct: 364 VSWTTMISG 372
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 292/525 (55%), Gaps = 3/525 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
++S + ++ ++ WNA++ G A P +A++ ++++ + +T L
Sbjct: 394 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 453
Query: 114 KGCARALTFSE-ATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
C E +H+ ++ GF++ YAK GDL ++Q +F+ + R+I
Sbjct: 454 SACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNI 513
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
+WNAM++ A E + L +M+ G + + LSA ++L L++G+ +HG
Sbjct: 514 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 573
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
V + + + NA DMYSKCG + + + S +SL +WN +I A +G +
Sbjct: 574 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFEE 632
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVV 351
+M G+ P V++++ L AC+H GLV++G+ +D++ ++P ++H V+
Sbjct: 633 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 692
Query: 352 DLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCG 411
DLLGR+GR+ EA I+ MPM P+ ++W+SLL + K +GN++ A+ L ++
Sbjct: 693 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 752
Query: 412 DFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKE 471
+VL SN++A RW DV+ VR+ M K+++K S+ ++ K+ F GD++HP E
Sbjct: 753 VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTME 812
Query: 472 IYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQ 531
IYAK+++IK IK GY A T L D EE K++ L HSE+LA+AY L+ST G+ ++
Sbjct: 813 IYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVR 872
Query: 532 VIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCG 576
+ KNLRIC DCH+V K +S + R I++RD+ RF F+ G+ G
Sbjct: 873 IFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F+++ WN+++ + A+ S+ S + V+ +T + AL C
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
F + +H V+ G Y K G++ +++V +MP+RD+ +WNA+
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 417
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG-ALKQGEIVHGYIVDEK 237
I G A+ P++A+A F+ M+ EG N +TV+ LSAC G L++G+ +H YIV
Sbjct: 418 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 477
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
+ + V N++I MY+KCG + + +F + +++ITWN M+ A A +G G + L L+
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLV 536
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH----YGSVVDL 353
+M GV D S+ L A ++EEG +L G VK +H + + D+
Sbjct: 537 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL----HGLAVKLGFEHDSFIFNAAADM 592
Query: 354 LGRAGRIKEAYDTINSMPMLPDVV-----LWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ G I E + MLP V W L+ A +G E +++EMG
Sbjct: 593 YSKCGEIGEV------VKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 644
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 153/330 (46%), Gaps = 2/330 (0%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
+S + ++F + + + W +++ G + +P + I Y+ + + + S +
Sbjct: 93 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 152
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
C S QI QV++ G ++ G++D A +FD+M +RD SW
Sbjct: 153 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 212
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
N++ + AQ E+ +F M+ N TV LS + K G +HG +V
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 272
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
D V VCN ++ MY+ G +A VF+ M TK LI+WN+++ +F +G AL
Sbjct: 273 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASFVNDGRSLDALG 331
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLG 355
LL M G + V++ +AL AC E+G L L+ S + N ++V + G
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 391
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+ G + E+ + MP DVV W +L+G
Sbjct: 392 KIGEMSESRRVLLQMPR-RDVVAWNALIGG 420
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 19/327 (5%)
Query: 69 PSTND--WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT-FSEA 125
P N+ WN ++ G+ + + ++R + K + + + C R+ + F E
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 126 TQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQG 185
Q+H V + G + Y G + ++KVF+EMP R++ SW +++ G +
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 186 SRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVC 245
P E I ++K M+ EG N+ ++ +S+C L G + G +V L+ + V
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 246 NAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG---DGYKALDLLDQMAL 302
N++I M G VD A +F MS + I+WN++ A+A NG + ++ L+ +
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH- 239
Query: 303 DGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGR----AG 358
D V+ VS L L H + G + G VVK V + L R AG
Sbjct: 240 DEVNSTTVSTL--LSVLGHVDHQKWGRGI----HGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLLGA 385
R EA MP D++ W SL+ +
Sbjct: 294 RSVEANLVFKQMPT-KDLISWNSLMAS 319
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 118/232 (50%), Gaps = 11/232 (4%)
Query: 167 MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGAL-KQ 225
MP R+ SWN M+SG+ + E + F++M + G +P+ + ++AC + G++ ++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 226 GEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFA 285
G VHG++ L +V V A++ +Y G V + VF+ M +++++W ++++ ++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVGYS 119
Query: 286 MNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMK 345
G+ + +D+ M +GV + S + +C GL+++ L + G VVK ++
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDE-SLGRQIIGQVVKSGLE 175
Query: 346 H----YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVE 393
S++ +LG G + A + M D + W S+ A G++E
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIE 226
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 284/528 (53%), Gaps = 3/528 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
D+S A ++F + W+ ++ + +A+ + + + + T S L
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
GCA Q+H V++ GFD YAK +D A K+F E+ ++
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEV 415
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
SWN +I G +A ++F+ +VT AL AC+ L ++ G VHG
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLA 475
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ V V N++IDMY+KCG + A SVF M T + +WN +I ++ +G G +A
Sbjct: 476 IKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHGLGRQA 534
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFD-LMKGSVVKPNMKHYGSVVD 352
L +LD M P+ +++L L C++AGL+++G F+ +++ ++P ++HY +V
Sbjct: 535 LRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVR 594
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGD 412
LLGR+G++ +A I +P P V++W+++L AS N E A ++ +++++
Sbjct: 595 LLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEAT 654
Query: 413 FVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEI 472
+VL+SN+YA ++W +V +R++M V+K PG S+ E +H F G HP+ K I
Sbjct: 655 YVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLI 714
Query: 473 YAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNG-TPIQ 531
++ + + GY + VL D+ +E+KD L HSE+LA+AYGL+ + I
Sbjct: 715 NGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRIL 774
Query: 532 VIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
++KNLRIC DCH+ +K+IS+I R++++RD RF F GVCSCGD+W
Sbjct: 775 IMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 148/299 (49%), Gaps = 5/299 (1%)
Query: 112 ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD 171
ALK F A +H Q+L+ + Y + GD+ A KVF+EMPK D
Sbjct: 253 ALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKND 312
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
+ W+ MI+ Q NEA+ LF RM+E PN+ T+ L+ C+ GE +HG
Sbjct: 313 VVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHG 372
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGY 291
+V D+++ V NA+ID+Y+KC +D A +F +S +K+ ++WNT+I+ + G+G
Sbjct: 373 LVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVIVGYENLGEGG 431
Query: 292 KALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVV 351
KA + + + V V++ +AL AC ++ GV++ L + + S++
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLI 491
Query: 352 DLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSC 410
D+ + G IK A N M + DV W +L+ T+G + A R L M C
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETI-DVASWNALISGYSTHG---LGRQALRILDIMKDRDC 546
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 116/281 (41%), Gaps = 24/281 (8%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L+ C + A IH +L+ G Y K G A +FDEMP+R+
Sbjct: 56 LRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN- 114
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
N LAQG + I L+ R+ EG N L L + +H
Sbjct: 115 ---NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSP 171
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
IV D N V A+I+ YS CG VD A +VF+ + C K ++ W ++ + NG
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILC-KDIVVWAGIVSCYVENGYFED 230
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS---------VVKPN 343
+L LL M + G P+ ++ AL A G+ FD KG V+ P
Sbjct: 231 SLKLLSCMRMAGFMPNNYTFDTALKA-------SIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 344 MKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLG 384
+ ++ L + G + +A+ N MP DVV W ++
Sbjct: 284 VGV--GLLQLYTQLGDMSDAFKVFNEMPK-NDVVPWSFMIA 321
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
+HS +++ G+D+ Y+ G +D+A+ VF+ + +DI W ++S +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNA 247
+++ L M+ G+ PN+ T AL A LGA + VHG I+ ++ V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
++ +Y++ G + A+ VF M ++ W+ MI F NG +A+DL +M V P
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMP-KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 308 DAVSYLAALCAC 319
+ + + L C
Sbjct: 347 NEFTLSSILNGC 358
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/498 (36%), Positives = 273/498 (54%), Gaps = 42/498 (8%)
Query: 22 IKQLQAHLITTGKFHFHPSRTK-LLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRG 80
IKQL AH + TG TK LL+ + P +L +A ++F QN T +N +++
Sbjct: 4 IKQLHAHCLRTG-----VDETKDLLQRLLLIP--NLVYARKLFDHHQNSCTFLYNKLIQA 56
Query: 81 LAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAX 140
+ QP ++I Y +S + T +F A + +HSQ R GF++
Sbjct: 57 YYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESD 116
Query: 141 XXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMI--------------------- 179
YAK G L A++VFDEM KRD+ WNAMI
Sbjct: 117 SFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 180 ----------SGLAQGSRPNEAIALFKRM-KEEGWRPNDVTVLGALSACSQLGALKQGEI 228
SG +Q +EA+ +F M K++ +PN +TV+ L AC+ LG L+ G
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG 288
+ GY + N+ VCNA I+MYSKCG +D A +F+ + ++L +WN+MI + A +G
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKG-SVVKPNMKHY 347
+AL L QM +G PDAV+++ L AC H G+V +G LF M+ + P ++HY
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY 356
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS 407
G ++DLLGR G+++EAYD I +MPM PD V+W +LLGA +GNVE+AE+AS L ++
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEP 416
Query: 408 NSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY-TEIDCKIHKFINGDQSH 466
+ G+ V++SN+YAA ++W V R+R+ M + + K G+SY E+ +HKF D+SH
Sbjct: 417 TNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSH 476
Query: 467 PNWKEIYAKMDEIKFRIK 484
P EIY ++EI R+K
Sbjct: 477 PRSYEIYQVLEEIFRRMK 494
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/539 (32%), Positives = 284/539 (52%), Gaps = 15/539 (2%)
Query: 55 DLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRS-PQKVDALTCSFAL 113
+++ A ++F + P+ W +V+ G +P A+S ++ + P + T +
Sbjct: 79 EINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVF 138
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK--RD 171
K C+ IH+++ G Y K D++ A++VFD M R+
Sbjct: 139 KACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRN 198
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKE--EGWRPNDVTVLGALSACSQLGALKQGEIV 229
+ SW +MI+ AQ +R +EAI LF+ R N + +SACS LG L+ G++
Sbjct: 199 VVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVA 258
Query: 230 HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
HG + + N +V +++DMY+KCG + A +F + C S+I++ +MIMA A +G
Sbjct: 259 HGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC-HSVISYTSMIMAKAKHGL 317
Query: 290 GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYG 348
G A+ L D+M ++P+ V+ L L AC+H+GLV EG+ LM V P+ +HY
Sbjct: 318 GEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYT 377
Query: 349 SVVDLLGRAGRIKEAYDTINSMPMLPD--VVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
VVD+LGR GR+ EAY+ ++ + + +LW +LL A + +G VE+ AS++L++
Sbjct: 378 CVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSN 437
Query: 407 SNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSH 466
++ LSN YA W D + +R M K S+ E ++ F GD S
Sbjct: 438 QQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSC 497
Query: 467 PNWKEIYAKMDEIKFRIKAYGYTAKTDL------VLHDIGEEDKDNALNYHSEKLAVAYG 520
EI + +++ R+K G+ + + V D+ EE KD ++ H E+LA+AYG
Sbjct: 498 DESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYG 557
Query: 521 LISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
L+ G+ I+++ NLR+C DCH K+IS I REI+VRD RF FK G C+C DYW
Sbjct: 558 LLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 140/282 (49%), Gaps = 8/282 (2%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
+H+ L+ GF + Y K +++ A+K+FDEM + ++ SW ++ISG +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 188 PNEAIALFKRMKEE-GWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCN 246
P A+++F++M E+ PN+ T ACS L + G+ +H + L N++V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 247 AVIDMYSKCGFVDKAYSVFQNM-SCTKSLITWNTMIMAFAMNGDGYKALDLLDQM--ALD 303
+++DMY KC V+ A VF +M +++++W +MI A+A N G++A++L AL
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 304 GVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
+ + + AC+ G ++ G L+ + N S++D+ + G + A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 364 YDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
+ I V+ + S++ A +G + E A + EM
Sbjct: 291 -EKIFLRIRCHSVISYTSMIMAKAKHG---LGEAAVKLFDEM 328
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 273/498 (54%), Gaps = 43/498 (8%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRT--KLLELCAISPAADLSFAAQIFRRIQNPSTND 73
C ++ H+ + A +I T FH + +L+ +C+ + D +A +F + NP+
Sbjct: 39 CKNIAHVPSIHAKIIRT--FHDQDAFVVFELIRVCSTLDSVD--YAYDVFSYVSNPNVYL 94
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+ A++ G S + +S Y + + D + LK C +IH+QVL
Sbjct: 95 YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVL 150
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD---------------------- 171
+ GF + Y K+G+L A+K+FDEMP RD
Sbjct: 151 KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALE 210
Query: 172 ---------IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGA 222
W AMI GL + N+A+ LF+ M+ E N+ T + LSACS LGA
Sbjct: 211 LFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGA 270
Query: 223 LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
L+ G VH ++ +++++++ V NA+I+MYS+CG +++A VF+ M K +I++NTMI
Sbjct: 271 LELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR-DKDVISYNTMIS 329
Query: 283 AFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VK 341
AM+G +A++ M G P+ V+ +A L AC+H GL++ G+ +F+ MK V+
Sbjct: 330 GLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVE 389
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRK 401
P ++HYG +VDLLGR GR++EAY I ++P+ PD ++ +LL A K +GN+E+ E +++
Sbjct: 390 PQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKR 449
Query: 402 LVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFIN 461
L E + G +VLLSN+YA+ +W + +RE+M + K PG S E+D +IH+F+
Sbjct: 450 LFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLV 509
Query: 462 GDQSHPNWKEIYAKMDEI 479
GD +HP+ + IY ++ E+
Sbjct: 510 GDIAHPHKEAIYQRLQEL 527
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 301 bits (770), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 280/506 (55%), Gaps = 40/506 (7%)
Query: 17 HSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNA 76
++L +KQ ++I TG + + K +E C S A L +A +F P+T N
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEAC--SNAGHLRYAYSVFTHQPCPNTYLHNT 83
Query: 77 VLRGLAMSPQPTQ---AISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
++R L++ +P AI+ YR + K D T F LK R QIH QV+
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV 143
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM--------------- 178
FGFD+ Y G L A+K+FDEM +D+ WNA+
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARS 203
Query: 179 ------------------ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQL 220
ISG A+ R +EAI +F+RM E P++VT+L LSAC+ L
Sbjct: 204 LLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADL 263
Query: 221 GALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTM 280
G+L+ GE + Y+ ++ V + NAVIDMY+K G + KA VF+ ++ ++++TW T+
Sbjct: 264 GSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN-ERNVVTWTTI 322
Query: 281 IMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV- 339
I A +G G +AL + ++M GV P+ V+++A L AC+H G V+ G RLF+ M+
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 340 VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMAS 399
+ PN++HYG ++DLLGRAG+++EA + I SMP + +W SLL AS + ++E+ E A
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Query: 400 RKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKF 459
+L+++ N+ G+++LL+N+Y+ RW + + +R M V+K+ G S E++ +++KF
Sbjct: 443 SELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKF 502
Query: 460 INGDQSHPNWKEIYAKMDEIKFRIKA 485
I+GD +HP + I+ + E+ +I++
Sbjct: 503 ISGDLTHPQVERIHEILQEMDLQIQS 528
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/500 (33%), Positives = 270/500 (54%), Gaps = 42/500 (8%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
+C ++ +KQ+ A LI TG + +++L C SP+ D+++A +F RI + + W
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTRINHKNPFVW 92
Query: 75 NAVLRGLAMSPQPTQAISWY-----RSVSRSPQKVDALTCSFALKGCARALTFSEATQIH 129
N ++RG + S P AIS + S S PQ+ LT K R + Q+H
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR---LTYPSVFKAYGRLGQARDGRQLH 149
Query: 130 SQVLRFGFDAXXXXXXXXXXXY-------------------------------AKTGDLD 158
V++ G + Y AK G +D
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 209
Query: 159 AAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACS 218
AQ +FDEMP+R+ SWN+MISG + R +A+ +F+ M+E+ +P+ T++ L+AC+
Sbjct: 210 QAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACA 269
Query: 219 QLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWN 278
LGA +QG +H YIV + ++N IV A+IDMY KCG +++ +VF+ + K L WN
Sbjct: 270 YLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE-CAPKKQLSCWN 328
Query: 279 TMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS 338
+MI+ A NG +A+DL ++ G+ PD+VS++ L AC H+G V F LMK
Sbjct: 329 SMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEK 388
Query: 339 -VVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEM 397
+++P++KHY +V++LG AG ++EA I +MP+ D V+W SLL A + GNVEMA+
Sbjct: 389 YMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKR 448
Query: 398 ASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIH 457
A++ L ++ + +VLLSN YA+ + + R M + + K G S E+D ++H
Sbjct: 449 AAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVH 508
Query: 458 KFINGDQSHPNWKEIYAKMD 477
+FI+ +HP EIY+ +D
Sbjct: 509 EFISCGGTHPKSAEIYSLLD 528
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 276/501 (55%), Gaps = 42/501 (8%)
Query: 19 LIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVL 78
L H+KQ+Q+ +I +G H H KLL C + +LS+A IF R P+T+ + AVL
Sbjct: 37 LNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLR-LCNLSYARFIFDRFSFPNTHLYAAVL 95
Query: 79 RGLAMS-P-QPTQAISWYR-SVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRF 135
+ S P + A S++R V+RS + + LK + +H+ + +
Sbjct: 96 TAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKS 155
Query: 136 GF--------------------------------DAXXXXXXXXXXXYAKTGDLDAAQKV 163
GF + YA++GD+ A +
Sbjct: 156 GFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVAL 215
Query: 164 FDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM-KEEGWRPNDVTVLGALSACSQLGA 222
F++MP+RD+ SWNA+++ Q EA++LF+RM E RPN+VTV+ LSAC+Q G
Sbjct: 216 FEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGT 275
Query: 223 LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
L+ + +H + L +V V N+++D+Y KCG +++A SVF+ M+ KSL WN+MI
Sbjct: 276 LQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFK-MASKKSLTAWNSMIN 334
Query: 283 AFAMNGDGYKALDLLDQMA---LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV 339
FA++G +A+ + ++M ++ + PD ++++ L AC H GLV +G FDLM
Sbjct: 335 CFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF 394
Query: 340 -VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMA 398
++P ++HYG ++DLLGRAGR EA + +++M M D +W SLL A K +G++++AE+A
Sbjct: 395 GIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVA 454
Query: 399 SRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHK 458
+ LV + N+ G +++N+Y W + +R R+ + ++ K PG+S EID ++H+
Sbjct: 455 VKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQ 514
Query: 459 FINGDQSHPNWKEIYAKMDEI 479
F + D+SHP +EIY +D +
Sbjct: 515 FYSLDKSHPETEEIYMILDSL 535
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 176/582 (30%), Positives = 284/582 (48%), Gaps = 72/582 (12%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P WN++L G A AI+ + + + K + S L+ A I
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISG------- 181
H +LR Y KTG L A+ VFD M ++I +WN+++SG
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 182 ------------------------LAQG----SRPNEAIALFKRMKEEGWRPNDVTVLGA 213
LA G +P +A+ + +MKE+G PN V+
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 214 LSACSQ-----------------------------------LGALKQGEIVHGYIVDEKL 238
S CS+ L L G+ VHG+ + + L
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
+ V A++DMY K G + A +F + KSL +WN M+M +AM G G + +
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIK-NKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRA 357
M G+ PDA+++ + L C ++GLV+EG + FDLM+ + P ++H +VDLLGR+
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRS 546
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLS 417
G + EA+D I +M + PD +W + L + K + ++E+AE+A ++L + ++ +++++
Sbjct: 547 GYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMI 606
Query: 418 NVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMD 477
N+Y+ RW DV+R+R M VR +S+ +ID +H F ++HP+ +IY ++
Sbjct: 607 NLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELY 666
Query: 478 EIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLR 537
++ +K GY T + DI + +K+ L H+EKLA+ YGLI PI+V+KN
Sbjct: 667 KLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTN 726
Query: 538 ICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
IC D HTV K +S + NREI++++ AR F+ G CSC D W
Sbjct: 727 ICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 157/369 (42%), Gaps = 69/369 (18%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L FA ++F + WN ++ S +A+ +R + S K T L+
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----- 170
C+ F+E QIH VLR G ++ Y++ G L+ ++KVF+ M R
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW 158
Query: 171 ------------------------------DIASWNAMISGLAQGSRPNEAIALFKRMKE 200
DI +WN+++SG A +AIA+ KRM+
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 201 EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
G +P+ ++ L A ++ G LK G+ +HGYI+ +L +V V +IDMY K G++
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 261 AYSVF-----QNMSCTKSL-----------------------------ITWNTMIMAFAM 286
A VF +N+ SL ITWN++ +A
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 287 NGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH 346
G KALD++ +M GV P+ VS+ A C+ G +++F M+ V PN
Sbjct: 339 LGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398
Query: 347 YGSVVDLLG 355
+++ +LG
Sbjct: 399 MSTLLKILG 407
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 124/235 (52%), Gaps = 2/235 (0%)
Query: 128 IHSQVLRFGFD-AXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGS 186
IH +++ G D + Y + L A K+FDEMPKRD +WN ++ +
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 187 RPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCN 246
+A+ LF+ M+ G + D T++ L CS +G +HGY++ L+ NV +CN
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 247 AVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVH 306
++I MYS+ G ++ + VF +M ++L +WN+++ ++ G A+ LLD+M + G+
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 307 PDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
PD V++ + L GL ++ + + M+ + +KP+ S++ + G +K
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/538 (30%), Positives = 282/538 (52%), Gaps = 20/538 (3%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVS-RSPQKVDALTC 109
S ++S+A +IF + + WN ++ A + + T A ++ +S ++ + D +T
Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITS 337
Query: 110 SFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
L A E IH +R GF Y + G L +A+ +FD M +
Sbjct: 338 INLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE 393
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
+++ SWN++I+ Q + A+ LF+ + + P+ T+ L A ++ +L +G +
Sbjct: 394 KNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453
Query: 230 HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
H YIV + N I+ N+++ MY+ CG ++ A F ++ K +++WN++IMA+A++G
Sbjct: 454 HAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI-LLKDVVSWNSIIMAYAVHGF 512
Query: 290 GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYG 348
G ++ L +M V+P+ ++ + L AC+ +G+V+EG F+ MK + P ++HYG
Sbjct: 513 GRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYG 572
Query: 349 SVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSN 408
++DL+GR G A + MP +P +W SLL AS+ + ++ +AE A+ ++ +M +
Sbjct: 573 CMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHD 632
Query: 409 SCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPN 468
+ G +VLL N+YA RW DV R++ M +K + + S E K H F NGD+SH
Sbjct: 633 NTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVA 692
Query: 469 WKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGE-------EDKDNALNYHSEKLAVAYGL 521
+IY +D + + + D+ +H + + + N+ HS +LA +GL
Sbjct: 693 TNKIYEVLDVVSRMV------GEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGL 746
Query: 522 ISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
IST G + V N RIC CH ++ S + REI+V D F F G CSCG+YW
Sbjct: 747 ISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 173/342 (50%), Gaps = 12/342 (3%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A Q+F + WN +++G +A+ +Y + + K D T F +K A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+ E +IH+ V++ GF + Y K G A+KVF+EMP+RDI SWN+M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
ISG ++ LFK M + G++P+ + + AL ACS + + K G+ +H + V ++
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 239 DM-NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
+ +V+V +++DMYSK G V A +F M ++++ WN MI +A NG A
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 298 DQMA-LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGR 356
+M+ +G+ PD ++ + L A A L + + + +G + P+M +++D+ G
Sbjct: 322 QKMSEQNGLQPDVITSINLLPA--SAILEGRTIHGYAMRRGFL--PHMVLETALIDMYGE 377
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGA----SKTYGNVEM 394
G++K A + M +V+ W S++ A K Y +E+
Sbjct: 378 CGQLKSAEVIFDRMAE-KNVISWNSIIAAYVQNGKNYSALEL 418
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 126/255 (49%), Gaps = 3/255 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
+A + ++ A ++FDEM K D WN MI G EA+ + RM G + + T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+ + + + +L++G+ +H ++ +V VCN++I +Y K G A VF+ M
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP- 192
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+ +++WN+MI + GDG+ +L L +M G PD S ++AL AC+H + G
Sbjct: 193 ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE 252
Query: 331 LF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
+ ++ + ++ S++D+ + G + A N M + ++V W ++G
Sbjct: 253 IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARN 311
Query: 390 GNVEMAEMASRKLVE 404
G V A + +K+ E
Sbjct: 312 GRVTDAFLCFQKMSE 326
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/571 (28%), Positives = 296/571 (51%), Gaps = 10/571 (1%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSF-AAQIFRRIQNPSTND 73
R S+ +K++ +++ G F P + + + + + A ++F I +
Sbjct: 135 RLKSIRCVKRVYGFMMSNG---FEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYS 191
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+ +++ G +A ++ + + T + L+ A + Q+H L
Sbjct: 192 YYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCAL 251
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ G Y+K GD++ A+ F+ MP++ +WN +I+G A EA+
Sbjct: 252 KLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALC 311
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
L M++ G + T+ + ++L L+ + H ++ + ++ A++D YS
Sbjct: 312 LLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYS 371
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYL 313
K G VD A VF + K++I+WN ++ +A +G G A+ L ++M V P+ V++L
Sbjct: 372 KWGRVDTARYVFDKLP-RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFL 430
Query: 314 AALCACNHAGLVEEGVRLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM 372
A L AC ++GL E+G +F + + +KP HY +++LLGR G + EA I P+
Sbjct: 431 AVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPL 490
Query: 373 LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRV 432
V +W +LL A + N+E+ + + KL MG G++V++ N+Y + + + V
Sbjct: 491 KTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGV 550
Query: 433 REAMITKDVRKVPGFSYTEIDCKIHKFINGDQ----SHPNWKEIYAKMDEIKFRIKAYGY 488
E + +K + +P ++ E+ + H F++GD+ + ++IY K+DE+ I YGY
Sbjct: 551 LETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGY 610
Query: 489 TAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKI 548
+ + +L D+ E++++ YHSEKLA+AYGL++T P+Q+ +N RIC +CH V++
Sbjct: 611 SEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEF 670
Query: 549 ISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
IS + RE++VRD +RF FK G CSCG YW
Sbjct: 671 ISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 135/303 (44%), Gaps = 24/303 (7%)
Query: 99 RSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLD 158
R KV T ++ C R + +++ ++ GF+ + K G +
Sbjct: 116 RCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMII 175
Query: 159 AAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACS 218
A+++FDE+P+R++ S+ ++ISG EA LFK M EE T L A +
Sbjct: 176 DARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASA 235
Query: 219 QLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWN 278
LG++ G+ +H + + N V +IDMYSKCG ++ A F+ M K+ + WN
Sbjct: 236 GLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWN 294
Query: 279 TMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY---------LAALCACN--HAGLVEE 327
+I +A++G +AL LL M GV D + LA L HA L+
Sbjct: 295 NVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN 354
Query: 328 GVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASK 387
G S + N ++VD + GR+ A + +P +++ W +L+G
Sbjct: 355 GFE-------SEIVANT----ALVDFYSKWGRVDTARYVFDKLPR-KNIISWNALMGGYA 402
Query: 388 TYG 390
+G
Sbjct: 403 NHG 405
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/483 (31%), Positives = 263/483 (54%), Gaps = 36/483 (7%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
K++ A +I G TK+++ C D+ +A ++F ++ NP+ +N+++R
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 84
Query: 83 MSPQPTQAISWYRSVSR-SPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXX 141
+ I Y+ + R S + D T F K CA + Q+H + +FG
Sbjct: 85 HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 144
Query: 142 XXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPN------------ 189
Y K DL A KVFDEM +RD+ SWN+++SG A+ +
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 190 -------------------EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
EA+ F+ M+ G P++++++ L +C+QLG+L+ G+ +H
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
Y VCNA+I+MYSKCG + +A +F M K +I+W+TMI +A +G+
Sbjct: 265 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME-GKDVISWSTMISGYAYHGNA 323
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGS 349
+ A++ ++M V P+ +++L L AC+H G+ +EG+R FD+M+ ++P ++HYG
Sbjct: 324 HGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGC 383
Query: 350 VVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNS 409
++D+L RAG+++ A + +MPM PD +W SLL + +T GN+++A +A LVE+
Sbjct: 384 LIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPED 443
Query: 410 CGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNW 469
G++VLL+N+YA +W DV R+R+ + ++++K PG S E++ + +F++GD S P W
Sbjct: 444 MGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFW 503
Query: 470 KEI 472
EI
Sbjct: 504 TEI 506
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 139/312 (44%), Gaps = 38/312 (12%)
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
R + +E +I++ ++ G K D+D A ++F+++ ++ +N+
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNS 78
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWR-PNDVTVLGALSACSQLGALKQGEIVHGYIVDE 236
+I S + I ++K++ + + P+ T +C+ LG+ G+ VHG++
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD------- 289
+V+ NA+IDMY K + A+ VF M + +I+WN+++ +A G
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMY-ERDVISWNSLLSGYARLGQMKKAKGL 197
Query: 290 -----------------GY-------KALDLLDQMALDGVHPDAVSYLAALCACNHAGLV 325
GY +A+D +M L G+ PD +S ++ L +C G +
Sbjct: 198 FHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSL 257
Query: 326 EEG--VRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
E G + L+ +G + + + + +++++ + G I +A M DV+ W +++
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCN--ALIEMYSKCGVISQAIQLFGQMEG-KDVISWSTMI 314
Query: 384 GASKTYGNVEMA 395
+GN A
Sbjct: 315 SGYAYHGNAHGA 326
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 264/507 (52%), Gaps = 45/507 (8%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT-FSEATQIHSQV 132
WN+++ G +A+S + + K+D T L A + T A+ H +
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI 355
Query: 133 LRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAI 192
++ G+ YAK G +D+A KVF+ M ++D+ SW A+++G +EA+
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEAL 415
Query: 193 ALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMY 252
LF M+ G P+ + LSA ++L L+ G+ VHG + ++ V N+++ MY
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMY 475
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
+KCG ++ A +F +M + LITW +I+ +A NG
Sbjct: 476 TKCGSLEDANVIFNSME-IRDLITWTCLIVGYAKNG------------------------ 510
Query: 313 LAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP 371
L+E+ R FD M+ + P +HY ++DL GR+G + ++ M
Sbjct: 511 -----------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQME 559
Query: 372 MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKR 431
+ PD +W+++L AS+ +GN+E E A++ L+E+ N+ +V LSN+Y+A R +
Sbjct: 560 VEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAAN 619
Query: 432 VREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAK 491
VR M ++++ K PG S+ E K+H F++ D+ HP EIY+K+DE+ IK GY A
Sbjct: 620 VRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFAD 679
Query: 492 TDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISN 551
LHD+ +E K+ L YHSEKLAVA+GL+ +G PI++IKNLR+CGDCH+ +K++
Sbjct: 680 MSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL-- 737
Query: 552 IYNREIIVRDRARFGRFKGGVCSCGDY 578
+ + G+F VC+ Y
Sbjct: 738 -----VTFAIEGKLGKFCISVCNNESY 759
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 174/387 (44%), Gaps = 11/387 (2%)
Query: 16 CHSLIHI---KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTN 72
C SL+ + +Q+ H I TG F + L L + +S A +F ++ N
Sbjct: 135 CTSLVLLLRGEQIHGHTIKTG-FDLDVNVVNGL-LAMYAQCKRISEAEYLFETMEGEKNN 192
Query: 73 -DWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQ 131
W ++L G + + +AI +R + R + + T L CA Q+H
Sbjct: 193 VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCC 252
Query: 132 VLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEA 191
+++ GF YAK ++++A+ + + M D+ SWN+MI G + EA
Sbjct: 253 IVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEA 312
Query: 192 IALFKRMKEEGWRPNDVTVLGALSACSQLG--ALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
+++F RM E + +D T+ L+ C L +K H IV +V NA++
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALV 371
Query: 250 DMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDA 309
DMY+K G +D A VF+ M K +I+W ++ NG +AL L M + G+ PD
Sbjct: 372 DMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDK 430
Query: 310 VSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINS 369
+ + L A L+E G ++ S ++ S+V + + G +++A NS
Sbjct: 431 IVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNS 490
Query: 370 MPMLPDVVLWQSLLGASKTYGNVEMAE 396
M + D++ W L+ G +E A+
Sbjct: 491 ME-IRDLITWTCLIVGYAKNGLLEDAQ 516
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 123/233 (52%), Gaps = 1/233 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y+ + L A+K+F P ++ SWNA+ISG + EA LF M+ +G +PN+ T+
Sbjct: 69 YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
L C+ L L +GE +HG+ + D++V V N ++ MY++C + +A +F+ M
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
K+ +TW +M+ ++ NG +KA++ + +G + ++ + L AC GV+
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQ 248
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+ + S K N+ +++D+ + ++ A + M + DVV W S++
Sbjct: 249 VHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGME-VDDVVSWNSMI 300
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 160/354 (45%), Gaps = 10/354 (2%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA 106
+ A S + LS A ++FR +T WNA++ G S +A + + + K +
Sbjct: 66 IVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNE 125
Query: 107 LTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE 166
T L+ C + QIH ++ GFD YA+ + A+ +F+
Sbjct: 126 YTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFET 185
Query: 167 MP-KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ 225
M +++ +W +M++G +Q +AI F+ ++ EG + N T L+AC+ + A +
Sbjct: 186 MEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRV 245
Query: 226 GEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFA 285
G VH IV N+ V +A+IDMY+KC ++ A ++ + M +++WN+MI+
Sbjct: 246 GVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGME-VDDVVSWNSMIVGCV 304
Query: 286 MNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMK 345
G +AL + +M + D + + L N L +++ +VK
Sbjct: 305 RQGLIGEALSMFGRMHERDMKIDDFTIPSIL---NCFALSRTEMKIASSAHCLIVKTGYA 361
Query: 346 HY----GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
Y ++VD+ + G + A M + DV+ W +L+ + G+ + A
Sbjct: 362 TYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSYDEA 414
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/326 (18%), Positives = 112/326 (34%), Gaps = 49/326 (15%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F + W A++ G + +A+ + ++ D + + L A
Sbjct: 383 ALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAE 442
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
Q+H ++ GF + Y K G L+ A +F+ M RD+ +W +
Sbjct: 443 LTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCL 502
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
I G A+ +A F M+ TV G +
Sbjct: 503 IVGYAKNGLLEDAQRYFDSMR---------TVYGITPGPEHYACM--------------- 538
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG---DGYKALD 295
ID++ + G K + M W ++ A +G +G +A
Sbjct: 539 ----------IDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAK 588
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPN-----MKHYGSV 350
L ++ + +AV Y+ + AG +E + LMK + ++ G V
Sbjct: 589 TLMELEPN----NAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKV 644
Query: 351 VDLLG---RAGRIKEAYDTINSMPML 373
+ R R+ E Y ++ M +L
Sbjct: 645 HSFMSEDRRHPRMVEIYSKVDEMMLL 670
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 264/514 (51%), Gaps = 41/514 (7%)
Query: 23 KQLQAHLITTG---KFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLR 79
K+L H++ G + + K+ LC + + A +F R WN ++
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGL-----MDMARGVFDRRCKEDVFSWNLMIS 209
Query: 80 GLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDA 139
G + ++I + R+ ++T L C++ ++H V +
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 140 XXXXXXXXXXXYAKTGDLDAAQKVF-------------------------------DEMP 168
YA G++D A ++F D+MP
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
RD SW MI G + NE++ +F+ M+ G P++ T++ L+AC+ LG+L+ GE
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG 288
+ YI K+ +V+V NA+IDMY KCG +KA VF +M + TW M++ A NG
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNG 448
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS-VVKPNMKHY 347
G +A+ + QM + PD ++YL L ACNH+G+V++ + F M+ ++P++ HY
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY 508
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS 407
G +VD+LGRAG +KEAY+ + MPM P+ ++W +LLGAS+ + + MAE+A++K++E+
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEP 568
Query: 408 NSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHP 467
++ + LL N+YA +RW D++ VR ++ ++K PGFS E++ H+F+ GD+SH
Sbjct: 569 DNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHL 628
Query: 468 NWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGE 501
+EIY K++E+ Y T +L + G+
Sbjct: 629 QSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 173/387 (44%), Gaps = 33/387 (8%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWN 75
C + KQL + IT G + KL +S+A ++F +I P WN
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWN 103
Query: 76 AVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR-ALTFSEATQIHSQVLR 134
+++G + + + Y ++ + D+ T F L G R + ++H V++
Sbjct: 104 NMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVK 163
Query: 135 FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIAL 194
FG + Y+ G +D A+ VFD K D+ SWN MISG + E+I L
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIEL 223
Query: 195 FKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSK 254
M+ P VT+L LSACS++ + VH Y+ + K + ++ + NA+++ Y+
Sbjct: 224 LVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAA 283
Query: 255 CGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG------------------------DG 290
CG +D A +F++M + +I+W +++ + G DG
Sbjct: 284 CGEMDIAVRIFRSMK-ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDG 342
Query: 291 Y-------KALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPN 343
Y ++L++ +M G+ PD + ++ L AC H G +E G + + + +K +
Sbjct: 343 YLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKND 402
Query: 344 MKHYGSVVDLLGRAGRIKEAYDTINSM 370
+ +++D+ + G ++A + M
Sbjct: 403 VVVGNALIDMYFKCGCSEKAQKVFHDM 429
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 238/435 (54%), Gaps = 14/435 (3%)
Query: 28 HLITTGKFHFHP----SRTKLLELC---AISPAADLSFAAQIFR-RI--QNPSTNDWNAV 77
H +TT P R KLL S A IFR RI Q P WN +
Sbjct: 29 HFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNI 88
Query: 78 LRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGF 137
+R P AI Y + RS D + +K + F+ ++HS +R GF
Sbjct: 89 MRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGF 148
Query: 138 DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKR 197
Y K G+ + A+KVFDE P+R + SWNA+I GL R NEA+ +F
Sbjct: 149 VGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVD 208
Query: 198 MKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLD--MNVIVCNAVIDMYSKC 255
MK G P+D T++ ++C LG L +H ++ K + ++++ N++IDMY KC
Sbjct: 209 MKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKC 268
Query: 256 GFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAA 315
G +D A +F+ M +++++W++MI+ +A NG+ +AL+ QM GV P+ ++++
Sbjct: 269 GRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGV 327
Query: 316 LCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLP 374
L AC H GLVEEG F +MK ++P + HYG +VDLL R G++KEA + MPM P
Sbjct: 328 LSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKP 387
Query: 375 DVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVRE 434
+V++W L+G + +G+VEMAE + +VE+ + G +V+L+NVYA R W DV+RVR+
Sbjct: 388 NVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRK 447
Query: 435 AMITKDVRKVPGFSY 449
M TK V K+P +SY
Sbjct: 448 LMKTKKVAKIPAYSY 462
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 263/506 (51%), Gaps = 70/506 (13%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWN 75
C ++ +KQ+ A ++ G +L+ ++S L +A ++F I P + N
Sbjct: 22 CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICN 81
Query: 76 AVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRF 135
VLRG A S +P + +S Y + + D T +F LK C++ S H +V+R
Sbjct: 82 HVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRH 141
Query: 136 GF-------------------------------DAXXXXXXXXXXXYAKTGDLDAAQKVF 164
GF A YAK G +D A ++F
Sbjct: 142 GFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLF 201
Query: 165 DEMP-------------------------------KRDIASWNAMISGLAQGSRPNEAIA 193
DEMP ++D+ +WNAMISG P EA+
Sbjct: 202 DEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALG 261
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI-----VDEKLDMNVIVCNAV 248
+FK M++ G P+ VT+L LSAC+ LG L+ G+ +H YI V + + + NA+
Sbjct: 262 IFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNAL 321
Query: 249 IDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPD 308
IDMY+KCG +D+A VF+ + + L TWNT+I+ A++ ++++ ++M V P+
Sbjct: 322 IDMYAKCGSIDRAIEVFRGVK-DRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPN 379
Query: 309 AVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTI 367
V+++ + AC+H+G V+EG + F LM+ ++PN+KHYG +VD+LGRAG+++EA+ +
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 439
Query: 368 NSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWH 427
SM + P+ ++W++LLGA K YGNVE+ + A+ KL+ M + GD+VLLSN+YA+ +W
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWD 499
Query: 428 DVKRVREAMITKDVRKVPGFSYTEID 453
V++VR+ V+K G S E D
Sbjct: 500 GVQKVRKMFDDTRVKKPTGVSLIEED 525
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 254/447 (56%), Gaps = 9/447 (2%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGL---AMSPQPTQAISWYRSVSRSPQKVDALTCSFA 112
+S A IF + + + A++ G + + W V SP ++ L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI-TLVSILP 449
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
+ G AL ++H +++ GFD YAK G ++ A ++F+ + KRDI
Sbjct: 450 VIGILLALKLGR--ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDI 507
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
SWN+MI+ AQ P+ AI +F++M G + V++ ALSAC+ L + G+ +HG+
Sbjct: 508 VSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGF 567
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
++ L +V + +IDMY+KCG + A +VF+ M K++++WN++I A +G
Sbjct: 568 MIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKD 626
Query: 293 ALDLLDQMA-LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSV 350
+L L +M G+ PD +++L + +C H G V+EGVR F M ++P +HY V
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 351 VDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSC 410
VDL GRAGR+ EAY+T+ SMP PD +W +LLGA + + NVE+AE+AS KL+++ ++
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 746
Query: 411 GDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWK 470
G +VL+SN +A + W V +VR M ++V+K+PG+S+ EI+ + H F++GD +HP
Sbjct: 747 GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESS 806
Query: 471 EIYAKMDEIKFRIKAYGYTAKTDLVLH 497
IY+ ++ + ++ GY + L LH
Sbjct: 807 HIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 167/346 (48%), Gaps = 2/346 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A+++FR + T WN ++ G S ++++++ + S DA+T S L ++
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
QIH ++R Y K + AQ +F + D+ + AM
Sbjct: 353 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
ISG +++ +F+ + + PN++T++ L L ALK G +HG+I+ +
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 472
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
D + AVIDMY+KCG ++ AY +F+ +S + +++WN+MI A + + A+D+
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
QM + G+ D VS AAL AC + G + M + ++ +++D+ + G
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE 404
+K A + +M ++V W S++ A +G ++ + ++VE
Sbjct: 592 NLKAAMNVFKTMKE-KNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 144/326 (44%), Gaps = 6/326 (1%)
Query: 60 AQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARA 119
+++F R+ WN +L G A I + + +A+T L CA
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK 252
Query: 120 LTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMI 179
L Q+H V+ G D Y+K G D A K+F M + D +WN MI
Sbjct: 253 LLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMI 312
Query: 180 SGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLD 239
SG Q E++ F M G P+ +T L + S+ L+ + +H YI+ +
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372
Query: 240 MNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
+++ + +A+ID Y KC V A ++F + + ++ + MI + NG +L++
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCN-SVDVVVFTAMISGYLHNGLYIDSLEMFRW 431
Query: 300 MALDGVHPDAVSYLAALCACNHAGLVEEGVRL--FDLMKGSVVKPNMKHYGSVVDLLGRA 357
+ + P+ ++ ++ L ++ G L F + KG + N+ +V+D+ +
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIG--CAVIDMYAKC 489
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLL 383
GR+ AY+ + D+V W S++
Sbjct: 490 GRMNLAYEIFERLSK-RDIVSWNSMI 514
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 5/296 (1%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRI--QNPSTNDWNAVLRG 80
KQ+ A LI + ++L + A+ S ++F R+ + S WN+++
Sbjct: 55 KQVHAFLIVNSISGDSYTDERILGMYAM--CGSFSDCGKMFYRLDLRRSSIRPWNSIISS 112
Query: 81 LAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAX 140
+ QA+++Y + D T +K C F + V G D
Sbjct: 113 FVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCN 172
Query: 141 XXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE 200
Y + G +D K+FD + ++D WN M++G A+ + I F M+
Sbjct: 173 EFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 232
Query: 201 EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
+ PN VT LS C+ + G +HG +V +D + N+++ MYSKCG D
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDD 292
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
A +F+ MS + +TWN MI + +G ++L +M GV PDA+++ + L
Sbjct: 293 ASKLFRMMSRADT-VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 205 PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSV 264
P +++L L ACS L+QG+ VH +++ + + ++ MY+ CG +
Sbjct: 35 PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 265 FQNMSCTKSLI-TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
F + +S I WN++I +F NG +AL +M GV PD ++ + AC
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 265/493 (53%), Gaps = 33/493 (6%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
+C S+ + ++ LIT G P ++ L A+S + D+ +A + ++ +P W
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGW 76
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
N V+RG + S P ++IS Y + R D +T F +K +R +H V++
Sbjct: 77 NFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVK 136
Query: 135 FG---------------------------FDAXXXXXXXX----XXXYAKTGDLDAAQKV 163
G FD YAK+GD+ +A+ V
Sbjct: 137 SGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLV 196
Query: 164 FDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW-RPNDVTVLGALSACSQLGA 222
FDEM +RD+ +W++MI G + N+A+ +F +M G + N+VT++ + AC+ LGA
Sbjct: 197 FDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGA 256
Query: 223 LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKS-LITWNTMI 281
L +G+ VH YI+D L + VI+ ++IDMY+KCG + A+SVF S ++ + WN +I
Sbjct: 257 LNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAII 316
Query: 282 MAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVK 341
A +G ++L L +M + PD +++L L AC+H GLV+E F +K S +
Sbjct: 317 GGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAE 376
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRK 401
P +HY +VD+L RAG +K+A+D I+ MP+ P + +LL +GN+E+AE +K
Sbjct: 377 PKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKK 436
Query: 402 LVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFIN 461
L+E+ ++ G +V L+NVYA +++ + +REAM K V+K+ G S ++D H+FI
Sbjct: 437 LIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIA 496
Query: 462 GDQSHPNWKEIYA 474
D++H + +IYA
Sbjct: 497 HDKTHFHSDKIYA 509
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 259/475 (54%), Gaps = 12/475 (2%)
Query: 16 CHSLIHIKQL--QAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTND 73
C S+ H+ Q+ Q HL + F S +L+ + ++S A DL+FA + + + +
Sbjct: 23 CSSIKHLLQIHGQIHLSSLQNDSFIIS--ELVRVSSLSLAKDLAFARTLLLHSSDSTPST 80
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
WN + RG + S P ++I Y + R K + LT F LK CA L + QI +VL
Sbjct: 81 WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVL 140
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ GFD Y A+KVFDEM +R++ SWN++++ L + + N
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE 200
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
F M + + P++ T++ LSAC G L G++VH ++ +L++N + A++DMY+
Sbjct: 201 CFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYA 258
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALD-GVHPDAVSY 312
K G ++ A VF+ M K++ TW+ MI+ A G +AL L +M + V P+ V++
Sbjct: 259 KSGGLEYARLVFERM-VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 313 LAALCACNHAGLVEEGVRLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP 371
L LCAC+H GLV++G + F ++ K +KP M HYG++VD+LGRAGR+ EAYD I MP
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMP 377
Query: 372 MLPDVVLWQSLLGASKTYGNVE---MAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHD 428
PD V+W++LL A + + + + E ++L+E+ G+ V+++N +A + W +
Sbjct: 378 FEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAE 437
Query: 429 VKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRI 483
VR M ++K+ G S E+ H+F +G + IY +D KF++
Sbjct: 438 AAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQL 492
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 279/562 (49%), Gaps = 18/562 (3%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
+Q+ AH+I G T ++ + L A ++F ++ ++ G
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNM--YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYT 261
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
+ + A+ + + + D+ S LK CA + QIH+ V + G ++
Sbjct: 262 QAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS 321
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
Y K ++A + F E+ + + SW+A+ISG Q S+ EA+ FK ++ +
Sbjct: 322 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 203 WRP-NDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKA 261
N T ACS L G VH + L + +A+I MYSKCG +D A
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 262 YSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
VF++M ++ W I A G+ +AL L ++M G+ P++V+++A L AC+H
Sbjct: 442 NEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSH 500
Query: 322 AGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQ 380
AGLVE+G D M + V P + HY ++D+ R+G + EA + +MP PD + W+
Sbjct: 501 AGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWK 560
Query: 381 SLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKD 440
L T+ N+E+ E+A +L ++ +VL N+Y +W + + + M +
Sbjct: 561 CFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERM 620
Query: 441 VRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIG 500
++K S+ + KIH+FI GD+ HP +EIY K+ E G+ + D+ ++
Sbjct: 621 LKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD------GFM-EGDMFQCNMT 673
Query: 501 EEDKDNALNYHSEKLAVAYGLISTVNGT---PIQVIKNLRICGDCHTVIKIISNIYNREI 557
E + L HSE+LA+A+GLIS V+G PI+V KNLR C DCH K +S + EI
Sbjct: 674 E--RREQLLDHSERLAIAFGLIS-VHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEI 730
Query: 558 IVRDRARFGRFKGGVCSCGDYW 579
++RD RF FK G CSC DYW
Sbjct: 731 VIRDSRRFHHFKEGKCSCNDYW 752
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 3/246 (1%)
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
N L L+ + +A + + + ++ V + + + C + S +H + +R
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MR 110
Query: 135 FGFD-AXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
G + Y + L+ A K+FDEM + + S MIS A+ ++A+
Sbjct: 111 MGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG 170
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
LF M G +P L + AL G +H +++ L N + +++MY
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYL 313
KCG++ A VF M+ K + M+ + G AL L + +GV D+ +
Sbjct: 231 KCGWLVGAKRVFDQMAVKKPVACTGLMV-GYTQAGRARDALKLFVDLVTEGVEWDSFVFS 289
Query: 314 AALCAC 319
L AC
Sbjct: 290 VVLKAC 295
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 204/339 (60%), Gaps = 3/339 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMK-EEGWRPNDVT 209
Y D+DAA+K+FD MP+R++ SWN MI G Q +P E I LF+ M+ P+DVT
Sbjct: 217 YCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVT 276
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
+L L A S GAL GE H ++ +KLD V VC A++DMYSKCG ++KA +F M
Sbjct: 277 ILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP 336
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
K + +WN MI +A+NG+ ALDL M ++ PD ++ LA + ACNH GLVEEG
Sbjct: 337 -EKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGR 394
Query: 330 RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
+ F +M+ + ++HYG +VDLLGRAG +KEA D I +MP P+ ++ S L A Y
Sbjct: 395 KWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQY 454
Query: 390 GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
++E AE +K VE+ + G++VLL N+YAA +RW D V+ M +K G S
Sbjct: 455 KDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSL 514
Query: 450 TEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGY 488
EI+ + +FI+GD +HP+ + I+ + ++ + Y
Sbjct: 515 IEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 159/360 (44%), Gaps = 20/360 (5%)
Query: 42 TKLLELCAISPAADLSFAAQIFRRIQNPSTNDW---NAVLRGLAMSPQPTQAISWYRSVS 98
TK L + A A + +A ++F Q P +D N++++ + Q + + YR +
Sbjct: 14 TKFLVISA--SAVGIGYARKLFD--QRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLR 69
Query: 99 RSP-QKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL 157
+ D T + K C+ ++ + Q+HSQ+ RFGF A YAK G +
Sbjct: 70 KETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKM 129
Query: 158 DAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSAC 217
A+ FDEMP R SW A+ISG + + A LF +M DV + A+
Sbjct: 130 GCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMP----HVKDVVIYNAMMD- 184
Query: 218 SQLGALKQGEIVHG-YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLIT 276
G +K G++ + DE VI +I Y +D A +F M ++L++
Sbjct: 185 ---GFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP-ERNLVS 240
Query: 277 WNTMIMAFAMNGDGYKALDLLDQM-ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
WNTMI + N + + L +M A + PD V+ L+ L A + G + G +
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 336 KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ + +K +++D+ + G I++A + MP V W +++ GN A
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE-KQVASWNAMIHGYALNGNARAA 359
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 157/484 (32%), Positives = 248/484 (51%), Gaps = 53/484 (10%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTK-----LLELCAISPAAD-----LSFAAQIFRR 65
C +L H+ Q A IT+G+ + L + +ISP+A +S+A +FR
Sbjct: 14 CRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRF 73
Query: 66 IQNPSTNDWNAVLRGLAM-SPQPTQAISWYRSVSRSPQKVDALTCSFALKGCA--RALTF 122
I NPST +N ++R + P + ++ + R D T F K CA +
Sbjct: 74 ITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDL 133
Query: 123 SEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE---------------- 166
+ +H Q LRFG + Y+ +D+A ++FDE
Sbjct: 134 TLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGL 193
Query: 167 ---------------MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVL 211
MP RD+ SWN++ISG AQ + EAI LF M G +P++V ++
Sbjct: 194 VKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIV 253
Query: 212 GALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCT 271
LSAC+Q G ++G+ +H Y ++L ++ + ++D Y+KCGF+D A +F+ +
Sbjct: 254 STLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE-LCSD 312
Query: 272 KSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRL 331
K+L TWN MI AM+G+G +D +M G+ PD V++++ L C+H+GLV+E L
Sbjct: 313 KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNL 372
Query: 332 FDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM----LPDVVLWQSLLGAS 386
FD M+ V MKHYG + DLLGRAG I+EA + I MP ++ W LLG
Sbjct: 373 FDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGC 432
Query: 387 KTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKD--VRKV 444
+ +GN+E+AE A+ ++ + G + ++ +YA +RW +V +VRE +I +D V+K
Sbjct: 433 RIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVRE-IIDRDKKVKKN 491
Query: 445 PGFS 448
GFS
Sbjct: 492 VGFS 495
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 212/344 (61%), Gaps = 3/344 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y ++G +D A K+FD+MP+RD+ SW AMI+G + EA+ F+ M+ G +P+ V +
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+ AL+AC+ LGAL G VH Y++ + NV V N++ID+Y +CG V+ A VF NM
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME- 268
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+++++WN++I+ FA NG+ +++L +M G PDAV++ AL AC+H GLVEEG+R
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 331 LFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
F +MK + P ++HYG +VDL RAGR+++A + SMPM P+ V+ SLL A +
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 390 G-NVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
G N+ +AE + L ++ S ++V+LSN+YAA +W ++R M ++K PGFS
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 449 YTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKT 492
EID +H F+ GD +H I ++ I ++ G +T
Sbjct: 449 SIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
AA++F ++ W A++ G +A+ W+R + S K D + AL C
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN 218
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
S +H VL F Y + G ++ A++VF M KR + SWN++
Sbjct: 219 LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSV 278
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-EIVHGYIVDEK 237
I G A +E++ F++M+E+G++P+ VT GAL+ACS +G +++G D +
Sbjct: 279 IVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYR 338
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
+ + ++D+YS+ G ++ A + Q+M + + +++ A + +G+
Sbjct: 339 ISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 119/267 (44%), Gaps = 36/267 (13%)
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQL--GALKQGEIVHG 231
SW + I+ L + R EA F M G PN +T + LS C G+ G+++HG
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 232 YIVDEKLDMN-VIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD- 289
Y LD N V+V A+I MYSK G KA VF M K+ +TWNTMI + +G
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME-DKNSVTWNTMIDGYMRSGQV 156
Query: 290 ----------------------------GYK--ALDLLDQMALDGVHPDAVSYLAALCAC 319
GY+ AL +M + GV PD V+ +AAL AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 320 NHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLW 379
+ G + G+ + + K N++ S++DL R G ++ A +M VV W
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK-RTVVSW 275
Query: 380 QSLLGASKTYGNVEMAEMASRKLVEMG 406
S++ GN + + RK+ E G
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKG 302
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 251/468 (53%), Gaps = 7/468 (1%)
Query: 33 GKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAIS 92
G + + + C+++ A A IFR I+ + W ++ G +
Sbjct: 144 GSLYVDNAMMNMYATCSVTMEA----ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLK 199
Query: 93 WYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYA 152
Y+ + +V + A++ A + + QIH+ V++ GF + Y
Sbjct: 200 MYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYC 259
Query: 153 KTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLG 212
+ G L A+ F EM +D+ +WN +IS L + S +EA+ +F+R + +G+ PN T
Sbjct: 260 RCGYLSEAKHYFHEMEDKDLITWNTLISELER-SDSSEALLMFQRFESQGFVPNCYTFTS 318
Query: 213 ALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK 272
++AC+ + AL G+ +HG I + NV + NA+IDMY+KCG + + VF + +
Sbjct: 319 LVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRR 378
Query: 273 SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF 332
+L++W +M++ + +G G +A++L D+M G+ PD + ++A L AC HAGLVE+G++ F
Sbjct: 379 NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYF 438
Query: 333 DLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG- 390
++M+ + P+ Y VVDLLGRAG+I EAY+ + MP PD W ++LGA K +
Sbjct: 439 NVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKH 498
Query: 391 NVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYT 450
N ++ +A+RK++E+ G +V+LS +YAA +W D RVR+ M +K G S+
Sbjct: 499 NGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Query: 451 EIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHD 498
++ ++ F D+ PN +Y+ + + + GY + D +++D
Sbjct: 559 LVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVND 606
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 118/234 (50%), Gaps = 3/234 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y + G ++ A+ +FDEMP RD+ +W AMI+G A + A F M ++G PN+ T+
Sbjct: 55 YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTL 114
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGF-VDKAYSVFQNMS 269
L +C + L G +VHG +V ++ ++ V NA+++MY+ C ++ A +F+++
Sbjct: 115 SSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIK 174
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
K+ +TW T+I F GDG L + QM L+ A+ A V G
Sbjct: 175 -VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGK 233
Query: 330 RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
++ + + N+ S++DL R G + EA + M D++ W +L+
Sbjct: 234 QIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMED-KDLITWNTLI 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 143/333 (42%), Gaps = 3/333 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F + + W A++ G A S +A + + + + T S LK C
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTG-DLDAAQKVFDEMPKRDIASWNA 177
+ +H V++ G + YA ++AA +F ++ ++ +W
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTT 183
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+I+G + ++K+M E + A+ A + + ++ G+ +H ++
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRG 243
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
N+ V N+++D+Y +CG++ +A F M K LITWNT+I D +AL +
Sbjct: 244 FQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTLISELE-RSDSSEALLMF 301
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRA 357
+ G P+ ++ + + AC + + G +L + N++ +++D+ +
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKC 361
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
G I ++ + ++V W S++ ++G
Sbjct: 362 GNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 209/335 (62%), Gaps = 8/335 (2%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG-WRPNDVT 209
YA GD++A ++VFD+MP+R++ SWN +I G AQ R +E + FKRM +EG PND T
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 210 VLGALSACSQLGALKQGEIVHGY---IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ 266
+ LSAC++LGA G+ VH Y + K+D+NV NA+IDMY KCG ++ A VF+
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVK--NALIDMYGKCGAIEIAMEVFK 248
Query: 267 NMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVE 326
+ + LI+WNTMI A +G G +AL+L +M G+ PD V+++ LCAC H GLVE
Sbjct: 249 GIK-RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVE 307
Query: 327 EGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+G+ F+ M + P ++H G VVDLL RAG + +A + IN MP+ D V+W +LLGA
Sbjct: 308 DGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGA 367
Query: 386 SKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVP 445
SK Y V++ E+A +L+++ + +FV+LSN+Y R+ D R++ AM +K
Sbjct: 368 SKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEA 427
Query: 446 GFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIK 480
G S+ E D + KF + + HP +E+ + E+K
Sbjct: 428 GVSWIETDDGLVKFYSSGEKHPRTEELQRILRELK 462
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 47/245 (19%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y DL +A++ FD P+RDI WN MISG + EA +LF +M
Sbjct: 69 YLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM------------ 116
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
C +V+ N V++ Y+ G ++ VF +M
Sbjct: 117 -----PCR----------------------DVMSWNTVLEGYANIGDMEACERVFDDMP- 148
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEGV 329
+++ +WN +I +A NG + L +M +G V P+ + L AC G + G
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 330 ---RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGAS 386
+ + + + V N+K+ +++D+ G+ G I+ A + + D++ W +++
Sbjct: 209 WVHKYGETLGYNKVDVNVKN--ALIDMYGKCGAIEIAMEVFKGIKR-RDLISWNTMINGL 265
Query: 387 KTYGN 391
+G+
Sbjct: 266 AAHGH 270
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 228/416 (54%), Gaps = 8/416 (1%)
Query: 41 RTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQA--ISWYRSVS 98
+T +L++ A S + +A ++F + W+A++ G + +A + + V+
Sbjct: 243 KTGILDVYAKSKC--IIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 99 RSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLD 158
+ V + L GCAR S +H ++ GF YAK G L
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 159 AAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACS 218
A + F E+ +D+ S+N++I+G RP E+ LF M+ G RP+ T+LG L+ACS
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 219 QLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWN 278
L AL G HGY V +N +CNA++DMY+KCG +D A VF M + +++WN
Sbjct: 421 HLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWN 479
Query: 279 TMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KG 337
TM+ F ++G G +AL L + M GV+PD V+ LA L AC+H+GLV+EG +LF+ M +G
Sbjct: 480 TMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRG 539
Query: 338 SV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAE 396
V P + HY + DLL RAG + EAYD +N MP PD+ + +LL A TY N E+
Sbjct: 540 DFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGN 599
Query: 397 MASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEI 452
S+K+ +G + VLLSN Y+A +RW D R+R + + K PG+S+ ++
Sbjct: 600 EVSKKMQSLGETT-ESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 164/361 (45%), Gaps = 30/361 (8%)
Query: 40 SRTKLLELCAISPAA-DLSFAAQIFRRIQNPSTND--WNAVLRGLAMSPQPTQAISWYRS 96
S T L+ L + + ++ A +F I +P N W+ ++R A + +A+ Y
Sbjct: 34 SSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYK 93
Query: 97 VSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGD 156
+ S + T F LK CA + IHS V F YAK G+
Sbjct: 94 MLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGE 153
Query: 157 LDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE-EGWRPNDVTVLGALS 215
L+ A KVFDEMPKRD+ +WNAMISG + + I LF M+ +G PN T++G
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 216 ACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI 275
A + GAL++G+ VHGY +++V ++D+Y+K + A VF ++ K+ +
Sbjct: 214 ALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF-DLDFKKNEV 272
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDG----VHPDAVSYLAALCA---------CNHA 322
TW+ MI + N +A ++ QM ++ V P A+ + CA C H
Sbjct: 273 TWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHC 332
Query: 323 GLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSL 382
V+ G + DL + + YGS+ D + I L DV+ + SL
Sbjct: 333 YAVKAGF-ILDLTVQNTIISFYAKYGSLCDAFRQFSEIG-----------LKDVISYNSL 380
Query: 383 L 383
+
Sbjct: 381 I 381
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMN--VIVCNAVIDMYSKCGFVDKAYSVFQNM 268
L L C + L G+++H +++ L ++ ++ N + +Y+ C V+ A VF +
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEI 61
Query: 269 SCTK-SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEE 327
+ + I W+ MI A+A N KALDL +M GV P +Y L AC +++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 328 GVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
G + + S +M ++VD + G ++ A + MP D+V W +++
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPK-RDMVAWNAMI 176
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 255/464 (54%), Gaps = 17/464 (3%)
Query: 127 QIHSQVLRFGFDAXXXXXXXXXXXYAKT-GDLDAAQKVFDEMPK-RDIASWNAMISGLAQ 184
Q+HS ++ G Y++ D K+F EM RDI +WN +I+ A
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAV 347
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
P AI LF ++++E P+ T L AC+ L + +H ++ + ++
Sbjct: 348 YD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVL 406
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG 304
N++I Y+KCG +D VF +M ++ +++WN+M+ A++++G L + +M
Sbjct: 407 NNSLIHAYAKCGSLDLCMRVFDDMD-SRDVVSWNSMLKAYSLHGQVDSILPVFQKM---D 462
Query: 305 VHPDAVSYLAALCACNHAGLVEEGVRLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
++PD+ +++A L AC+HAG VEEG+R+F + + P + HY V+D+L RA R EA
Sbjct: 463 INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEA 522
Query: 364 YDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM--GSNSCGDFVLLSNVYA 421
+ I MPM PD V+W +LLG+ + +GN + ++A+ KL E+ +NS ++ +SN+Y
Sbjct: 523 EEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMS-YIQMSNIYN 581
Query: 422 ARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKF 481
A +++ + M T VRK P S+TEI K+H+F +G + P+ + +Y ++ +
Sbjct: 582 AEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLIS 641
Query: 482 RIKAYGYTAKT-DLVLHDIGEEDKDNALNYHSEKLAVAYGLI-----STVNGTPIQVIKN 535
+K GY + EE +++ L +HSEKLA+A+ ++ S IQ++KN
Sbjct: 642 WLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKN 701
Query: 536 LRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
RIC DCH +K+ S + +EI++RD RF FK CSC DYW
Sbjct: 702 TRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 13/241 (5%)
Query: 78 LRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR--F 135
LR L S +A+S + S Q A F + CA + +H +L +
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALF--QACAEQRNLLDGINLHHHMLSHPY 90
Query: 136 GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALF 195
+ YAK G++ A++VFD MP+R++ SW A+I+G Q E LF
Sbjct: 91 CYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLF 150
Query: 196 KRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKC 255
M + PN+ T+ L++C + G+ VHG + L ++ V NAVI MY +C
Sbjct: 151 SSMLSHCF-PNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRC 205
Query: 256 ---GFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
+A++VF+ + K+L+TWN+MI AF G KA+ + +M DGV D +
Sbjct: 206 HDGAAAYEAWTVFEAIK-FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATL 264
Query: 313 L 313
L
Sbjct: 265 L 265
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 129/300 (43%), Gaps = 44/300 (14%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
WN ++ A+ P +AI + + + D T S LK CA +T A IH+QV+
Sbjct: 338 WNGIITAFAVY-DPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVI 396
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ GF A YAK G LD +VFD+M RD+ SWN+M+ + + + +
Sbjct: 397 KGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILP 456
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD--EKL-DMNVIVCNAVID 250
+F++M P+ T + LSACS G +++G + + + E L +N C VID
Sbjct: 457 VFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYAC--VID 511
Query: 251 MYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAV 310
M S+ FA +A +++ QM +D PDAV
Sbjct: 512 MLSRAE--------------------------RFA------EAEEVIKQMPMD---PDAV 536
Query: 311 SYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
++A L +C G G D +K V N Y + ++ G EA +I M
Sbjct: 537 VWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEM 596
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 238/418 (56%), Gaps = 12/418 (2%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F ++ T WN++L GL + + A R PQ+ D ++ + L G AR
Sbjct: 173 AMKLFEKMSERDTVSWNSMLGGLVKAGELRDA---RRLFDEMPQR-DLISWNTMLDGYAR 228
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP--KRDIASWN 176
S+A ++ ++ + Y+K GD++ A+ +FD+MP +++ +W
Sbjct: 229 CREMSKAFELFEKMP----ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWT 284
Query: 177 AMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDE 236
+I+G A+ EA L +M G + + V+ L+AC++ G L G +H +
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDL 296
L N V NA++DMY+KCG + KA+ VF ++ K L++WNTM+ ++G G +A++L
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIEL 403
Query: 297 LDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLG 355
+M +G+ PD V+++A LC+CNHAGL++EG+ F M+ + P ++HYG +VDLLG
Sbjct: 404 FSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLG 463
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVL 415
R GR+KEA + +MPM P+VV+W +LLGA + + V++A+ LV++ G++ L
Sbjct: 464 RVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSL 523
Query: 416 LSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIY 473
LSN+YAA + W V +R M + V K G S E++ IH+F D+SHP +IY
Sbjct: 524 LSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 188/397 (47%), Gaps = 29/397 (7%)
Query: 15 RCHSLIHIKQLQAHLITTG---KFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPST 71
+C +L +KQL A +I H P L LC + + A ++F ++Q P+
Sbjct: 28 KCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQT-----NLAVRVFNQVQEPNV 82
Query: 72 NDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQ 131
+ N+++R A + QP QA + + R D T F LK C+ +H+
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 132 VLRFGFDAXXXXXXXXXXXYAKTGDLDA--AQKVFDEMPKRDIASWNAMISGLAQGSRPN 189
+ + G + Y++ G L A K+F++M +RD SWN+M+ GL +
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 190 EAIALFKRMKEE---GWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL-DMNVIVC 245
+A LF M + W T+L + C E+ + + EK+ + N +
Sbjct: 203 DARRLFDEMPQRDLISWN----TMLDGYARCR--------EMSKAFELFEKMPERNTVSW 250
Query: 246 NAVIDMYSKCGFVDKAYSVFQNMSC-TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG 304
+ ++ YSK G ++ A +F M K+++TW +I +A G +A L+DQM G
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 305 VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAY 364
+ DA + ++ L AC +GL+ G+R+ ++K S + N +++D+ + G +K+A+
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 365 DTINSMPMLPDVVLWQSLLGASKTYGN-VEMAEMASR 400
D N +P D+V W ++L +G+ E E+ SR
Sbjct: 371 DVFNDIPK-KDLVSWNTMLHGLGVHGHGKEAIELFSR 406
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 144/327 (44%), Gaps = 23/327 (7%)
Query: 84 SPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXX 143
S P +A SW S +++ L CA ++ Q+H+Q++R
Sbjct: 3 SSLPVRAPSWVSSRRIFEERLQDLP------KCA---NLNQVKQLHAQIIRRNLHEDLHI 53
Query: 144 XXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW 203
+ + A +VF+++ + ++ N++I AQ S+P +A +F M+ G
Sbjct: 54 APKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGL 113
Query: 204 RPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCG--FVDKA 261
++ T L ACS L +++H +I L ++ V NA+ID YS+CG V A
Sbjct: 114 FADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDA 173
Query: 262 YSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
+F+ MS + ++WN+M+ G+ A L D+M D +S+ L
Sbjct: 174 MKLFEKMS-ERDTVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTMLDGYAR 228
Query: 322 AGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLP--DVVLW 379
+ + LF+ M + N + ++V +AG ++ A + MP LP +VV W
Sbjct: 229 CREMSKAFELFEKMP----ERNTVSWSTMVMGYSKAGDMEMARVMFDKMP-LPAKNVVTW 283
Query: 380 QSLLGASKTYGNVEMAEMASRKLVEMG 406
++ G ++ A+ ++V G
Sbjct: 284 TIIIAGYAEKGLLKEADRLVDQMVASG 310
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/426 (33%), Positives = 235/426 (55%), Gaps = 3/426 (0%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L+ A ++F +I+ P T WN ++ GLA + +A+S + + S DA++ L
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR-DIAS 174
+ + S+ QIHS ++++GF A Y DL +F++ D S
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS 440
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
WN +++ Q +P E + LFK M P+ +T+ L C ++ +LK G VH Y +
Sbjct: 441 WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL 500
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
L + N +IDMY+KCG + +A +F +M + +++W+T+I+ +A +G G +AL
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVGYAQSGFGEEAL 559
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDL 353
L +M G+ P+ V+++ L AC+H GLVEEG++L+ M+ + P +H VVDL
Sbjct: 560 ILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDL 619
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDF 413
L RAGR+ EA I+ M + PDVV+W++LL A KT GNV +A+ A+ ++++ +
Sbjct: 620 LARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAH 679
Query: 414 VLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIY 473
VLL +++A+ W + +R +M DV+K+PG S+ EI+ KIH F D HP +IY
Sbjct: 680 VLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIY 739
Query: 474 AKMDEI 479
+ I
Sbjct: 740 TVLHNI 745
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 167/354 (47%), Gaps = 6/354 (1%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRS-VSRSPQKVDALTCSFALK 114
+S A+++F I W++++ G + +A+S + +S + +LK
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
C+ L +QIH ++ YA+ G L++A++VFD++ + D AS
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
WN +I+GLA +EA+++F +M+ G+ P+ +++ L A ++ AL QG +H YI+
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
++ VCN+++ MY+ C + +++F++ ++WNT++ A + + L
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML 458
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG--VRLFDLMKGSVVKPNMKHYGSVVD 352
L M + PD ++ L C ++ G V + L G + P ++D
Sbjct: 459 RLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTG--LAPEQFIKNGLID 516
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ + G + +A +SM DVV W +L+ G E A + +++ G
Sbjct: 517 MYAKCGSLGQARRIFDSMDN-RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG 569
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 153/347 (44%), Gaps = 3/347 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F + + + +V+ G + + Q +AI Y + + D +K CA
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS 180
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+ Q+H+QV++ + Y + + A +VF +P +D+ SW+++
Sbjct: 181 SSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 179 ISGLAQGSRPNEAIALFKRMKEEG-WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
I+G +Q EA++ K M G + PN+ +L ACS L G +HG + +
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
L N I ++ DMY++CGF++ A VF + +WN +I A NG +A+ +
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYADEAVSVF 359
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRA 357
QM G PDA+S + LCA + +G+++ + ++ S++ +
Sbjct: 360 SQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFC 419
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGN-VEMAEMASRKLV 403
+ ++ D V W ++L A + VEM + LV
Sbjct: 420 SDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLV 466
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 132/282 (46%), Gaps = 3/282 (1%)
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
C+ + + ++ +IH +L Y K G L A++VFD MP+R++ S
Sbjct: 76 ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVS 135
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
+ ++I+G +Q + EAI L+ +M +E P+ + AC+ + G+ +H ++
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
+ ++I NA+I MY + + A VF + K LI+W+++I F+ G ++AL
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP-MKDLISWSSIIAGFSQLGFEFEAL 254
Query: 295 DLLDQMALDGV-HPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDL 353
L +M GV HP+ + ++L AC+ + G ++ L S + N S+ D+
Sbjct: 255 SHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDM 314
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
R G + A + + PD W ++ G + A
Sbjct: 315 YARCGFLNSARRVFDQIER-PDTASWNVIIAGLANNGYADEA 355
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 176 NAMISGLAQGSRPNEAIALFK-RMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
N I+ L + + EA+ F K ++ T + + ACS +L QG +H +I+
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
+ + I+ N ++ MY KCG + A VF M ++L+++ ++I ++ NG G +A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP-ERNLVSYTSVITGYSQNGQGAEAI 153
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
L +M + + PD ++ + + AC + V G +L + ++ +++ +
Sbjct: 154 RLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY 213
Query: 355 GRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
R ++ +A +PM D++ W S++ G
Sbjct: 214 VRFNQMSDASRVFYGIPM-KDLISWSSIIAGFSQLG 248
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 247/490 (50%), Gaps = 42/490 (8%)
Query: 19 LIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVL 78
L H+ +L+ L++ H H + + C D+ A ++F WN ++
Sbjct: 179 LGHVLKLRLELVS----HVHNASIHMFASCG-----DMENARKVFDESPVRDLVSWNCLI 229
Query: 79 RGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFD 138
G + +AI Y+ + K D +T + C+ + + + V G
Sbjct: 230 NGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 139 AXXXXXXXXXXXYAKTGD-------------------------------LDAAQKVFDEM 167
++K GD LD ++K+FD+M
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 168 PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE 227
++D+ WNAMI G Q R +A+ALF+ M+ +P+++T++ LSACSQLGAL G
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
+H YI L +NV + +++DMY+KCG + +A SVF + T++ +T+ +I A++
Sbjct: 410 WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ-TRNSLTYTAIIGGLALH 468
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKH 346
GD A+ ++M G+ PD ++++ L AC H G+++ G F MK + P +KH
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 347 YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
Y +VDLLGRAG ++EA + SMPM D +W +LL + +GNVE+ E A++KL+E+
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD 588
Query: 407 SNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSH 466
+ G +VLL +Y W D KR R M + V K+PG S E++ + +FI D+S
Sbjct: 589 PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSR 648
Query: 467 PNWKEIYAKM 476
P ++IY ++
Sbjct: 649 PESEKIYDRL 658
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 208/426 (48%), Gaps = 36/426 (8%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
+C L+H+KQ+QA +I G + ++L+ CA+S + L ++ +I + I+NP+ W
Sbjct: 62 KCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSW 121
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRS---PQKVDALTCSFALKGCARALTFSEATQIHSQ 131
N +RG + S P ++ Y+ + R + D T K CA S I
Sbjct: 122 NVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGH 181
Query: 132 VLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEA 191
VL+ + +A GD++ A+KVFDE P RD+ SWN +I+G + +A
Sbjct: 182 VLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKA 241
Query: 192 IALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDM 251
I ++K M+ EG +P+DVT++G +S+CS LG L +G+ + Y+ + L M + + NA++DM
Sbjct: 242 IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDM 301
Query: 252 YSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG----------------------- 288
+SKCG + +A +F N+ +++++W TMI +A G
Sbjct: 302 FSKCGDIHEARRIFDNLE-KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAM 360
Query: 289 --------DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVV 340
G AL L +M PD ++ + L AC+ G ++ G+ + ++ +
Sbjct: 361 IGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSL 420
Query: 341 KPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASR 400
N+ S+VD+ + G I EA + + + + + +++G +G+ A
Sbjct: 421 SLNVALGTSLVDMYAKCGNISEALSVFHGIQT-RNSLTYTAIIGGLALHGDASTAISYFN 479
Query: 401 KLVEMG 406
++++ G
Sbjct: 480 EMIDAG 485
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 237/450 (52%), Gaps = 4/450 (0%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
+Q+ I G F L+ + S L+ A ++F + ++ W+A++ G +
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTM--YSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
+ + +A+ + + + K T L C+ E Q+HS +L+ GF+
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLF 358
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
YAK G L A+K FD + +RD+A W ++ISG Q S EA+ L++RMK G
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAG 418
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
PND T+ L ACS L L+ G+ VHG+ + + V + +A+ MYSKCG ++
Sbjct: 419 IIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGN 478
Query: 263 SVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHA 322
VF+ + K +++WN MI + NG G +AL+L ++M +G+ PD V+++ + AC+H
Sbjct: 479 LVFRR-TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 323 GLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQS 381
G VE G F++M + + P + HY +VDLL RAG++KEA + I S + + LW+
Sbjct: 538 GFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRI 597
Query: 382 LLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDV 441
LL A K +G E+ A KL+ +GS +V LS +Y A R DV+RV + M V
Sbjct: 598 LLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGV 657
Query: 442 RKVPGFSYTEIDCKIHKFINGDQSHPNWKE 471
K G S+ E+ + H F+ GD HP +E
Sbjct: 658 SKEVGCSWIELKNQYHVFVVGDTMHPMIEE 687
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 157/351 (44%), Gaps = 13/351 (3%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFA--LKGCAR 118
++F + +T W+ ++ G A + +AI + R ++ F L A
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAA 233
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+ QIH ++ G Y+K L+ A K+FD R+ +W+AM
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 293
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
++G +Q EA+ LF RM G +P++ T++G L+ACS + L++G+ +H +++
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
+ ++ A++DMY+K G + A F + + + W ++I + N D +AL L
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMK---HYGSVVD-LL 354
+M G+ P+ + + L AC+ +E G ++ G +K GS + +
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGKQV----HGHTIKHGFGLEVPIGSALSTMY 468
Query: 355 GRAGRIKEAYDTINSMPMLPDVVLWQSLL-GASKTYGNVEMAEMASRKLVE 404
+ G +++ P DVV W +++ G S E E+ L E
Sbjct: 469 SKCGSLEDGNLVFRRTPN-KDVVSWNAMISGLSHNGQGDEALELFEEMLAE 518
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQG-- 185
+H Q++R G YAK G L A +F+ + +D+ SWN++I+G +Q
Sbjct: 36 VHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGG 95
Query: 186 -SRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
S + LF+ M+ + PN T+ G A S L + G H +V ++ V
Sbjct: 96 ISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYV 155
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG---DGYKALDLLDQMA 301
+++ MY K G V+ VF M ++ TW+TM+ +A G + K +L +
Sbjct: 156 DTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREK 214
Query: 302 LDGVHPDAV--SYLAALCACNHAGL 324
+G D V + L++L A + GL
Sbjct: 215 EEGSDSDYVFTAVLSSLAATIYVGL 239
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 17/200 (8%)
Query: 205 PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSV 264
P+ T+L L+ SQ L G VHG I+ + N +++ Y+KCG + KA+S+
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 265 FQNMSCTKSLITWNTMIMAFAMNG---DGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
F + C K +++WN++I ++ NG Y + L +M + P+A + A +
Sbjct: 72 FNAIIC-KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130
Query: 322 AGLVEEGVRLFDLMKGSVVKPNMKHYG------SVVDLLGRAGRIKEAYDTINSMPMLPD 375
G + L VVK M +G S+V + +AG +++ MP +
Sbjct: 131 LQSSTVGRQAHAL----VVK--MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE-RN 183
Query: 376 VVLWQSLLGASKTYGNVEMA 395
W +++ T G VE A
Sbjct: 184 TYTWSTMVSGYATRGRVEEA 203
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 262/473 (55%), Gaps = 14/473 (2%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSF--AAQIFRRIQNPSTN 72
RC+++ IK + I G + +KLL P + F A+ IF I+ P++
Sbjct: 20 RCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSF 79
Query: 73 DWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA---LTCSFALKGCARALTFSEATQIH 129
++ ++R + S QP + ++ + + ++ A LT F + C +A FS QIH
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 130 SQVLRFG-FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRP 188
V++ G F + Y + L A+KVFDE+P+ D+ W+ +++G +
Sbjct: 140 CWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 189 NEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK-LDMNVIVCNA 247
+E + +F+ M +G P++ +V AL+AC+Q+GAL QG+ +H ++ + ++ +V V A
Sbjct: 200 SEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTA 259
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMAL-DGVH 306
++DMY+KCG ++ A VF+ ++ +++ +W +I +A G KA+ L+++ DG+
Sbjct: 260 LVDMYAKCGCIETAVEVFKKLT-RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIK 318
Query: 307 PDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYD 365
PD+V L L AC H G +EEG + + M+ + P +HY +VDL+ RAGR+ +A +
Sbjct: 319 PDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALN 378
Query: 366 TINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGD----FVLLSNVYA 421
I MPM P +W +LL +T+ NVE+ E+A + L+++ + + V LSN+Y
Sbjct: 379 LIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYF 438
Query: 422 ARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYA 474
+ QR + +VR + + VRK PG+S E+D + KF++GD SHPN +I+
Sbjct: 439 SVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHT 491
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 245/448 (54%), Gaps = 22/448 (4%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
+C SL ++KQ+ A +IT G H +KLL L S LS+A I R+I NPS +
Sbjct: 18 KCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHL---SSTVCLSYALSILRQIPNPSVFLY 74
Query: 75 NAVLRGLAMSPQPTQ---AISWYRSVSRSPQKVDALTCSFALKGCARALTFS-----EAT 126
N ++ + + TQ A S Y + S F +A F
Sbjct: 75 NTLISSIVSNHNSTQTHLAFSLYDQILSSRSNF-VRPNEFTYPSLFKASGFDAQWHRHGR 133
Query: 127 QIHSQVLRF--GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQ 184
+H+ VL+F + YA G L A+ +F+ + + D+A+WN +++ A
Sbjct: 134 ALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYAN 193
Query: 185 GSRPN---EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMN 241
+ E + LF RM+ RPN+++++ + +C+ LG +G H Y++ L +N
Sbjct: 194 SEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLN 250
Query: 242 VIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
V ++ID+YSKCG + A VF MS + + +N MI A++G G + ++L +
Sbjct: 251 QFVGTSLIDLYSKCGCLSFARKVFDEMS-QRDVSCYNAMIRGLAVHGFGQEGIELYKSLI 309
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRI 360
G+ PD+ +++ + AC+H+GLV+EG+++F+ MK ++P ++HYG +VDLLGR+GR+
Sbjct: 310 SQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRL 369
Query: 361 KEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVY 420
+EA + I MP+ P+ LW+S LG+S+T+G+ E E+A + L+ + + G++VLLSN+Y
Sbjct: 370 EEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIY 429
Query: 421 AARQRWHDVKRVREAMITKDVRKVPGFS 448
A RW DV++ RE M V K PG S
Sbjct: 430 AGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 260/473 (54%), Gaps = 14/473 (2%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSF--AAQIFRRIQNPSTN 72
RC+++ IK + I G + +KLL P + F A+ IF I+ P++
Sbjct: 20 RCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSF 79
Query: 73 DWNAVLRGLAMSPQPTQAISWYRSVSRSPQK---VDALTCSFALKGCARALTFSEATQIH 129
++ ++R + S QP + ++ + + ++ LT F + C +A FS QIH
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIH 139
Query: 130 SQVLRFG-FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRP 188
V++ G F + Y + L A+KVFDE+P+ D+ W+ +++G +
Sbjct: 140 CWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 189 NEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK-LDMNVIVCNA 247
+E + +FK M G P++ +V AL+AC+Q+GAL QG+ +H ++ ++ ++ +V V A
Sbjct: 200 SEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTA 259
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMAL-DGVH 306
++DMY+KCG ++ A VF+ ++ +++ +W +I +A G KA LD++ DG+
Sbjct: 260 LVDMYAKCGCIETAVEVFEKLT-RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIK 318
Query: 307 PDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYD 365
PD+V L L AC H G +EEG + + M+ + P +HY +VDL+ RAGR+ +A D
Sbjct: 319 PDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALD 378
Query: 366 TINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGD----FVLLSNVYA 421
I MPM P +W +LL +T+ NVE+ E+A + L+++ + + V LSN+Y
Sbjct: 379 LIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYF 438
Query: 422 ARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYA 474
+ QR + +VR + + +RK PG+S E+D + KF++GD SHPN +I+
Sbjct: 439 SVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHT 491
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 240/464 (51%), Gaps = 6/464 (1%)
Query: 24 QLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAM 83
Q AH++ G R L+ S + FA+++F ++ W A++ G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLIS--GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 84 SPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFG-FDAXXX 142
+ ++A+ ++ + ++ + +T LK + +H L G
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
Y K D AQKVFDEMP R++ +W A+I+G Q ++ + +F+ M +
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
PN+ T+ LSAC+ +GAL +G VH Y++ +++N +ID+Y KCG +++A
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 263 SVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHA 322
VF+ + K++ TW MI FA +G A DL M V P+ V+++A L AC H
Sbjct: 362 LVFERLH-EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHG 420
Query: 323 GLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQS 381
GLVEEG RLF MKG ++P HY +VDL GR G ++EA I MPM P V+W +
Sbjct: 421 GLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 480
Query: 382 LLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDV 441
L G+ + + E+ + A+ +++++ + G + LL+N+Y+ Q W +V RVR+ M + V
Sbjct: 481 LFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQV 540
Query: 442 RKVPGFSYTEIDCKIHKFINGDQSHP-NWKEIYAKMDEIKFRIK 484
K PGFS+ E+ K+ +FI D P ++Y +D + +++
Sbjct: 541 VKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 180/377 (47%), Gaps = 9/377 (2%)
Query: 19 LIHIKQLQAHLITTGKFHFHPSR--TKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNA 76
+H+KQ+ L+T+ F+ ++LL C + A +A ++ ++Q S W++
Sbjct: 14 FLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCC-TAATQFRYARRLLCQLQTLSIQLWDS 72
Query: 77 VLRGLAMSPQPTQAISW--YRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
++ + + +S+ YR + R+ T LK + L S Q H+ +++
Sbjct: 73 LIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFK-LRDSNPFQFHAHIVK 131
Query: 135 FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIAL 194
FG D+ Y+ +G D A ++FD +D+ +W AMI G + +EA+
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVY 191
Query: 195 FKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG-YIVDEKLDMNVIVCNAVIDMYS 253
F MK+ G N++TV+ L A ++ ++ G VHG Y+ ++ +V + ++++DMY
Sbjct: 192 FVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYG 251
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYL 313
KC D A VF M +++++TW +I + + K + + ++M V P+ +
Sbjct: 252 KCSCYDDAQKVFDEMP-SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLS 310
Query: 314 AALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPML 373
+ L AC H G + G R+ M + ++ N +++DL + G ++EA +
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE- 369
Query: 374 PDVVLWQSLLGASKTYG 390
+V W +++ +G
Sbjct: 370 KNVYTWTAMINGFAAHG 386
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 242/433 (55%), Gaps = 4/433 (0%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRG---LAMSPQPTQAISWYRSVSRSPQKVDALTCSFA 112
L+ A ++F +NA++ G L + +A++ +R + + LT
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL 460
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L+ A + + QIH + ++G + Y+ L ++ VFDEM +D+
Sbjct: 461 LRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL 520
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
WN+M +G Q S EA+ LF ++ RP++ T ++A L +++ G+ H
Sbjct: 521 VIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQ 580
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
++ L+ N + NA++DMY+KCG + A+ F + + ++ ++ WN++I ++A +G+G K
Sbjct: 581 LLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDS-AASRDVVCWNSVISSYANHGEGKK 639
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVD 352
AL +L++M +G+ P+ ++++ L AC+HAGLVE+G++ F+LM ++P +HY +V
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVS 699
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGD 412
LLGRAGR+ +A + I MP P ++W+SLL GNVE+AE A+ + G
Sbjct: 700 LLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGS 759
Query: 413 FVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEI 472
F +LSN+YA++ W + K+VRE M + V K PG S+ I+ ++H F++ D+SH +I
Sbjct: 760 FTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQI 819
Query: 473 YAKMDEIKFRIKA 485
Y +D++ +I+
Sbjct: 820 YEVLDDLLVQIRG 832
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 155/337 (45%), Gaps = 9/337 (2%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
++ +A +F + ST W ++ G + ++ + + D S L
Sbjct: 197 GNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
C+ QIH+ +LR+G + Y K G + AA K+F+ MP ++I
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
SW ++SG Q + EA+ LF M + G +P+ L++C+ L AL G VH Y
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG---DG 290
+ L + V N++IDMY+KC + A VF ++ ++ +N MI ++ G +
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVF-DIFAAADVVLFNAMIEGYSRLGTQWEL 435
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV--RLFDLMKGSVVKPNMKHYG 348
++AL++ M + P +++++ L A A L G+ ++ LM + ++
Sbjct: 436 HEALNIFRDMRFRLIRPSLLTFVSLLRAS--ASLTSLGLSKQIHGLMFKYGLNLDIFAGS 493
Query: 349 SVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+++D+ +K++ + M + D+V+W S+
Sbjct: 494 ALIDVYSNCYCLKDSRLVFDEMK-VKDLVIWNSMFAG 529
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 139/283 (49%), Gaps = 18/283 (6%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAI----SWYRSVSRSPQKVDA 106
S A + +A ++F ++ + W+ ++ +++ ++R+ SP +
Sbjct: 90 SRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPN--EY 147
Query: 107 LTCSF-----ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQ 161
+ SF L G R + F Q+ S +++ GFD Y K G++D A+
Sbjct: 148 ILSSFIQACSGLDGRGRWMVF----QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 162 KVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG 221
VFD +P++ +W MISG + R ++ LF ++ E+ P+ + LSACS L
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
L+ G+ +H +I+ L+M+ + N +ID Y KCG V A+ +F M K++I+W T++
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLL 322
Query: 282 MAFAMNGDGYKALDLLDQMALDGVHPD--AVSYLAALCACNHA 322
+ N +A++L M+ G+ PD A S + CA HA
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 13/267 (4%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
+H Q++ +G + Y++ G + A+KVF++MP+R++ SW+ M+S
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 188 PNEAIALFKRMKEEGWR-----PNDVTVLGALSACSQLGALKQGEI--VHGYIVDEKLDM 240
E++ +F E WR PN+ + + ACS L + + + ++V D
Sbjct: 126 YEESLVVFL----EFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDR 181
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
+V V +ID Y K G +D A VF + KS +TW TMI G Y +L L Q+
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
D V PD L AC+ +E G ++ + ++ + ++D + GR+
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 361 KEAYDTINSMPMLPDVVLWQSLLGASK 387
A+ N MP +++ W +LL K
Sbjct: 301 IAAHKLFNGMPN-KNIISWTTLLSGYK 326
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 236/400 (59%), Gaps = 16/400 (4%)
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSR-SPQKVDALTCSFALK-GCARALTFSEATQIHSQV 132
N L+ S +P +A+ +R R SP VD+ + FA+K A+ + + QIH+ V
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 133 LRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP-KRDIASWNAMISGLAQGSRPNEA 191
+ GF+A Y+ GD+D A++VFDE P K++I W AMIS + EA
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 192 IALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK--LDMNVIVCNAVI 249
I LFKRM+ E + V V ALSAC+ LGA++ GE ++ + K L M++ + N+++
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLL 211
Query: 250 DMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDL------LDQMALD 303
+MY K G +KA +F S K + T+ +MI +A+NG ++L+L +DQ
Sbjct: 212 NMYVKSGETEKARKLFDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 304 GVHPDAVSYLAALCACNHAGLVEEGVRLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKE 362
+ P+ V+++ L AC+H+GLVEEG R F ++ +KP H+G +VDL R+G +K+
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 363 AYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAA 422
A++ IN MP+ P+ V+W++LLGA +GNVE+ E R++ E+ + GD+V LSN+YA+
Sbjct: 331 AHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYAS 390
Query: 423 RQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFING 462
+ W + ++R+ + R++PG S+ E+ I++F++G
Sbjct: 391 KGMWDEKSKMRDRVRK---RRMPGKSWIELGSIINEFVSG 427
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/528 (28%), Positives = 273/528 (51%), Gaps = 8/528 (1%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +IF + +T +NA++ G + +A+ + + + ++ + + A+ C
Sbjct: 370 AVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGL 429
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS--WN 176
+ QIH ++FG + + A+++FD+ P +S
Sbjct: 430 VSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATT 489
Query: 177 AMISGLAQGSRPNEAIALFKR-MKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
++I G A+ P++A++LF R + E+ ++V++ L+ C LG + G +H Y +
Sbjct: 490 SIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALK 549
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
++ + N++I MY+KC D A +F M +I+WN++I + + +G +AL
Sbjct: 550 AGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLISCYILQRNGDEALA 608
Query: 296 LLDQMALDGVHPDAVSYLAALCACNH--AGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVD 352
L +M + PD ++ + A + + + LF MK ++P +HY + V
Sbjct: 609 LWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVR 668
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGD 412
+LG G ++EA DTINSMP+ P+V + ++LL + + + N +A+ ++ ++ + +
Sbjct: 669 VLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSE 728
Query: 413 FVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEI 472
++L SN+Y+A WH + +RE M + RK P S+ + KIH F D SHP K+I
Sbjct: 729 YILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDI 788
Query: 473 YAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLIST-VNGTPIQ 531
Y ++ + GY T+ VL ++ E K + L +HS KLAV YG++S+ G P++
Sbjct: 789 YRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVR 848
Query: 532 VIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
V+KN+ +CGDCH K IS + REI++RD + F F G CSC D W
Sbjct: 849 VMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 151/350 (43%), Gaps = 40/350 (11%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAIS-WYRSVSRSPQKVDALTCSFALKGCA 117
A +F + +P+ + A++ G + +A+ ++R + + T L C
Sbjct: 133 AILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACV 192
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTG--DLDAAQKVFDEMPKRDIASW 175
R FS QIH +++ GF Y K D K+FDE+P+RD+ASW
Sbjct: 193 RVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASW 252
Query: 176 NAMISGLAQGSRPNEAIALFKRM-KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
N ++S L + + ++A LF M + EG+ + T+ LS+C+ L +G +HG +
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAI 312
Query: 235 DEKLDMNVIVCNAVIDMYSK-------------------------------CGFVDKAYS 263
L + V NA+I YSK G VD A
Sbjct: 313 RIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVE 372
Query: 264 VFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAG 323
+F N++ K+ IT+N ++ F NG G KAL L M GV S +A+ AC
Sbjct: 373 IFANVT-EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVS 431
Query: 324 --LVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP 371
V E + F + G+ P ++ +++D+ R R+ +A + + P
Sbjct: 432 EKKVSEQIHGFCIKFGTAFNPCIQ--TALLDMCTRCERMADAEEMFDQWP 479
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 120/252 (47%), Gaps = 12/252 (4%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW-RPNDVT 209
Y K G A VF + + S+ A+ISG ++ + EA+ +F RM++ G +PN+ T
Sbjct: 124 YLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYT 183
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSK--CGFVDKAYSVFQN 267
+ L+AC ++ G +HG IV +V V N+++ +Y K D +F
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDE 243
Query: 268 MSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM-ALDGVHPDAVSYLAALCACNHAGLVE 326
+ + + +WNT++ + G +KA DL +M ++G D+ + L +C + ++
Sbjct: 244 IP-QRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLL 302
Query: 327 EGVRLFDLMKGSVVKPNMKHYGSVVD-LLGRAGRI--KEAYDTINSMPMLPDVVLWQSLL 383
G L G ++ + SV + L+G + + +++ M M D V + ++
Sbjct: 303 RGREL----HGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 384 GASKTYGNVEMA 395
A ++G V+ A
Sbjct: 359 TAYMSFGMVDSA 370
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 141/361 (39%), Gaps = 41/361 (11%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQ-KVDALTCSFALKGCARA 119
++F I WN V+ L + +A + ++R VD+ T S L C +
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 120 LTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL---------------------- 157
++H + +R G Y+K D+
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 158 ---------DAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDV 208
D+A ++F + +++ ++NA+++G + +A+ LF M + G D
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 209 TVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVF--- 265
++ A+ AC + K E +HG+ + N + A++DM ++C + A +F
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQW 478
Query: 266 -QNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQ-MALDGVHPDAVSYLAALCACNHAG 323
N+ +K+ ++I +A NG KA+ L + + + D VS L C G
Sbjct: 479 PSNLDSSKAT---TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLG 535
Query: 324 LVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
E G ++ + ++ S++ + + +A N+M DV+ W SL+
Sbjct: 536 FREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMRE-HDVISWNSLI 594
Query: 384 G 384
Sbjct: 595 S 595
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 235/422 (55%), Gaps = 8/422 (1%)
Query: 62 IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT 121
+F ++ WN ++ + + + + + K+D +T + L +
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE--MPKRDIASWNAMI 179
Q H+ ++R G Y+K+G + +QK+F+ +RD A+WN+MI
Sbjct: 435 KEIGKQTHAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
Query: 180 SGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLD 239
SG Q + +F++M E+ RPN VTV L ACSQ+G++ G+ +HG+ + + LD
Sbjct: 494 SGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD 553
Query: 240 MNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
NV V +A++DMYSK G + A +F ++ +T+ TMI+ + +G G +A+ L
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQTK-ERNSVTYTTMILGYGQHGMGERAISLFLS 612
Query: 300 MALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAG 358
M G+ PDA++++A L AC+++GL++EG+++F+ M+ ++P+ +HY + D+LGR G
Sbjct: 613 MQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVG 672
Query: 359 RIKEAYDTINSMPMLPDVV-LWQSLLGASKTYGNVEMAEMASRKLVEM--GSNSCGDFVL 415
R+ EAY+ + + ++ LW SLLG+ K +G +E+AE S +L + G N G VL
Sbjct: 673 RVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVL 732
Query: 416 LSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAK 475
LSN+YA Q+W V +VR M K ++K G S EI ++ F++ DQ HP+ EIY
Sbjct: 733 LSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDV 792
Query: 476 MD 477
+D
Sbjct: 793 ID 794
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y++ G + + VF M +RD+ SWN MIS Q +E + L M+++G++ + +TV
Sbjct: 363 YSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITV 422
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS- 269
LSA S L + G+ H +++ + + + + +IDMYSK G + + +F+
Sbjct: 423 TALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIRISQKLFEGSGY 481
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
+ TWN+MI + NG K + +M + P+AV+ + L AC+ G V+ G
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGK 541
Query: 330 RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
+L + N+ ++VD+ +AG IK A D + V +LG Y
Sbjct: 542 QLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILG----Y 597
Query: 390 GNVEMAEMASRKLVEM 405
G M E A + M
Sbjct: 598 GQHGMGERAISLFLSM 613
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 166/361 (45%), Gaps = 21/361 (5%)
Query: 39 PS-RTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSV 97
PS R++L ++C + A Q+F I P+T WN ++ G + P +A+ +Y +
Sbjct: 40 PSIRSRLSKICQ---DGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM 96
Query: 98 SRSP--QKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKT- 154
++ DA T S LK CA +H ++R ++ Y
Sbjct: 97 KKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCL 156
Query: 155 -----GDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVT 209
+ D +KVFD M ++++ +WN +IS + R EA F M +P+ V+
Sbjct: 157 NAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVS 216
Query: 210 VLGALSACSQLGALKQGEIVHGYIV---DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ 266
+ A S ++K+ + +G ++ DE + ++ V ++ I MY++ G ++ + VF
Sbjct: 217 FVNVFPAVSISRSIKKANVFYGLMLKLGDEYVK-DLFVVSSAISMYAELGDIESSRRVFD 275
Query: 267 NMSCT-KSLITWNTMIMAFAMNGDGYKALDL-LDQMALDGVHPDAVSYLAALCACNHAGL 324
SC +++ WNTMI + N ++++L L+ + + D V+YL A A +
Sbjct: 276 --SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQ 333
Query: 325 VEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLG 384
VE G + + + + + S++ + R G + +++ SM DVV W +++
Sbjct: 334 VELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRE-RDVVSWNTMIS 392
Query: 385 A 385
A
Sbjct: 393 A 393
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 215/394 (54%), Gaps = 3/394 (0%)
Query: 56 LSFAAQIFRRIQNPSTND-WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
LS A ++F RI + WN +L+G + I +R + ++D+ + + +
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
C+ +H V++ D Y K GDL A ++F E ++ +
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVIT 500
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
WNAMI+ + +AIALF RM E ++P+ +T++ L AC G+L++G+++H YI
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
+ + +MN+ + A+IDMY+KCG ++K+ +F + K + WN MI + M+GD A+
Sbjct: 561 ETEHEMNLSLSAALIDMYAKCGHLEKSRELF-DAGNQKDAVCWNVMISGYGMHGDVESAI 619
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
L DQM V P ++LA L AC HAGLVE+G +LF M VKPN+KHY +VDLL
Sbjct: 620 ALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLL 679
Query: 355 GRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFV 414
R+G ++EA T+ SMP PD V+W +LL + T+G EM + + V + G ++
Sbjct: 680 SRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYI 739
Query: 415 LLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
+L+N+Y+A +W + +R RE M V K G S
Sbjct: 740 MLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 142/297 (47%), Gaps = 7/297 (2%)
Query: 18 SLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAV 77
SL +++ A +IT G +KL+ A +LS +++F + WN++
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLS--SRVFHLVTRRDIFLWNSI 96
Query: 78 LRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFG- 136
++ + +++ ++ S+ S Q D T + CA L F T +H VL+ G
Sbjct: 97 IKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGG 156
Query: 137 FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFK 196
FD Y+K G L A VFDEMP RD+ +W A+ISG Q +
Sbjct: 157 FDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLC 216
Query: 197 RMKEEGW---RPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
+M G +PN T+ ACS LGALK+G +HG+ V L + V +++ YS
Sbjct: 217 KMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYS 276
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAV 310
K G +AY F+ + + + +W ++I + A +GD ++ D+ +M G+HPD V
Sbjct: 277 KSGNPSEAYLSFRELG-DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 157/349 (44%), Gaps = 10/349 (2%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S + + S A FR + + W +++ LA S ++ + + D + S
Sbjct: 276 SKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVIS 335
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
+ + + + H V+R F Y K L A+K+F + +
Sbjct: 336 CLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEE 395
Query: 171 -DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
+ +WN M+ G + + I LF++++ G + + +S+CS +GA+ G+ +
Sbjct: 396 GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL 455
Query: 230 HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
H Y+V LD+ + V N++ID+Y K G + A+ +F ++ITWN MI ++
Sbjct: 456 HCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMIASYVHCEQ 513
Query: 290 GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGS 349
KA+ L D+M + P +++ + L AC + G +E G + + + + N+ +
Sbjct: 514 SEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAA 573
Query: 350 VVDLLGRAGRI---KEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
++D+ + G + +E +D N D V W ++ +G+VE A
Sbjct: 574 LIDMYAKCGHLEKSRELFDAGNQ----KDAVCWNVMISGYGMHGDVESA 618
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 151/345 (43%), Gaps = 12/345 (3%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVD-----ALTCSFAL 113
A +F + + W A++ G + + + + + + VD L C F
Sbjct: 180 ACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGF-- 237
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
+ C+ E +H ++ G + Y+K+G+ A F E+ D+
Sbjct: 238 QACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMF 297
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
SW ++I+ LA+ E+ +F M+ +G P+ V + ++ ++ + QG+ HG++
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ ++ VCN+++ MY K + A +F +S + WNTM+ + K
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKC 417
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDL 353
++L ++ G+ D+ S + + +C+H G V G L + + + + S++DL
Sbjct: 418 IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDL 477
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMA 398
G+ G + A+ +V+ W +++ +Y + E +E A
Sbjct: 478 YGKMGDLTVAWRMFCEAD--TNVITWNAMIA---SYVHCEQSEKA 517
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 238/430 (55%), Gaps = 5/430 (1%)
Query: 44 LLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQK 103
L+EL A LS + R + + + WN+++ A QA+ +R + K
Sbjct: 345 LVELYA--ECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 104 VDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKV 163
DA T + ++ C A QIH V+R + Y+K+G +D+A V
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTV 461
Query: 164 FDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGAL 223
F+++ R + +WN+M+ G +Q EAI+LF M N+VT L + ACS +G+L
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Query: 224 KQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
++G+ VH ++ L ++ A+IDMY+KCG ++ A +VF+ MS ++S+++W++MI A
Sbjct: 522 EKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMS-SRSIVSWSSMINA 579
Query: 284 FAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPN 343
+ M+G A+ +QM G P+ V ++ L AC H+G VEEG F+LMK V PN
Sbjct: 580 YGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPN 639
Query: 344 MKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLV 403
+H+ +DLL R+G +KEAY TI MP L D +W SL+ + + +++ + L
Sbjct: 640 SEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLS 699
Query: 404 EMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGD 463
++ ++ G + LLSN+YA W + +R+R AM + +++KVPG+S EID K+ +F G+
Sbjct: 700 DIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGE 759
Query: 464 QSHPNWKEIY 473
++ EIY
Sbjct: 760 ENRIQTDEIY 769
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 188/391 (48%), Gaps = 7/391 (1%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHP-SRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
C SL + QL AHL+ TG+ P TKL+E A + D S +F P + +
Sbjct: 11 CSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSS--RLVFEAFPYPDSFMY 68
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT-FSEATQIHSQVL 133
+++ AI Y + ++ L+ CA + S ++H +++
Sbjct: 69 GVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRII 128
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ G D Y +TG+L A+KVFD MP RD+ +W+ ++S + +A+
Sbjct: 129 KGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALR 188
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
+FK M ++G P+ VT++ + C++LG L+ VHG I + D++ +CN+++ MYS
Sbjct: 189 MFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYS 248
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYL 313
KCG + + +F+ ++ K+ ++W MI ++ KAL +M G+ P+ V+
Sbjct: 249 KCGDLLSSERIFEKIA-KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 314 AALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG-SVVDLLGRAGRIKEAYDTINSMPM 372
+ L +C GL+ EG + + PN + ++V+L G++ + +T+ +
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC-ETVLRVVS 366
Query: 373 LPDVVLWQSLLGASKTYGNVEMAEMASRKLV 403
++V W SL+ G V A R++V
Sbjct: 367 DRNIVAWNSLISLYAHRGMVIQALGLFRQMV 397
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 243/458 (53%), Gaps = 32/458 (6%)
Query: 18 SLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQ---IFRRIQNPSTNDW 74
+LI KQ+ A L+ G H + KL+ P+ + S +F R +P +
Sbjct: 20 TLIQAKQIHAQLVING-CHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLF 78
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL---KGCARALTFSEATQIHSQ 131
N +L+ P+ + I + S ++ T F L A + +H
Sbjct: 79 NTLLK--CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGM 136
Query: 132 VLRFGF-DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQ-----G 185
V + GF YAK GDL A+KVFDEMP+R +WNAMI G
Sbjct: 137 VKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGN 196
Query: 186 SRPNEAIALFKRMK--EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL----D 239
+A+ LF+R G RP D T++ LSA SQ G L+ G +VHGYI EKL +
Sbjct: 197 HNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI--EKLGFTPE 254
Query: 240 MNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
++V + A++DMYSKCG ++ A+SVF+ M K++ TW +M A+NG G + +LL++
Sbjct: 255 VDVFIGTALVDMYSKCGCLNNAFSVFELMK-VKNVFTWTSMATGLALNGRGNETPNLLNR 313
Query: 300 MALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAG 358
MA G+ P+ +++ + L A H GLVEEG+ LF MK V P ++HYG +VDLLG+AG
Sbjct: 314 MAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAG 373
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE-------MGSNSCG 411
RI+EAY I +MP+ PD +L +SL A YG M E + L+E + + C
Sbjct: 374 RIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECE 433
Query: 412 DFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
D+V LSNV A + +W +V+++R+ M + ++ PG+S+
Sbjct: 434 DYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSF 471
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/428 (32%), Positives = 241/428 (56%), Gaps = 3/428 (0%)
Query: 58 FAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCA 117
+ + F R+ + W V+ G A + +A+ +R V++ ++D + L+ +
Sbjct: 439 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
+ +IH +LR G Y K ++ A +VF+ + +D+ SW +
Sbjct: 499 VLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTS 557
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
MIS A +EA+ LF+RM E G + V +L LSA + L AL +G +H Y++ +
Sbjct: 558 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
+ + AV+DMY+ CG + A +VF + K L+ + +MI A+ M+G G A++L
Sbjct: 618 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGR 356
D+M + V PD +S+LA L AC+HAGL++EG +M+ ++P +HY +VD+LGR
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLL 416
A + EA++ + M P +W +LL A +++ E+ E+A+++L+E+ + G+ VL+
Sbjct: 737 ANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLV 796
Query: 417 SNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKM 476
SNV+A + RW+DV++VR M + K PG S+ E+D K+HKF D+SHP KEIY K+
Sbjct: 797 SNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
Query: 477 DEIKFRIK 484
E+ +++
Sbjct: 857 SEVTRKLE 864
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 5/289 (1%)
Query: 97 VSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR-FGFDAXXXXXXXXXXXYAKTG 155
VS + V+A ++ L+ C + S+ Q+HS++ + F Y K G
Sbjct: 73 VSENNSPVEAF--AYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCG 130
Query: 156 DLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALS 215
LD A+KVFDEMP R +WN MI P A+AL+ M+ EG + L
Sbjct: 131 SLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLK 190
Query: 216 ACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI 275
AC++L ++ G +H +V + NA++ MY+K + A +F +
Sbjct: 191 ACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAV 250
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF-DL 334
WN+++ +++ +G + L+L +M + G P++ + ++AL AC+ + G + +
Sbjct: 251 LWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV 310
Query: 335 MKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+K S + +++ + R G++ +A + M DVV W SL+
Sbjct: 311 LKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN-ADVVTWNSLI 358
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 160/359 (44%), Gaps = 15/359 (4%)
Query: 55 DLSFAAQIFRRIQNPSTND-WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
DLS A ++F Q WN++L + S + + + +R + + ++ T AL
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 114 KGCARALTFSEATQIHSQVLRFG-FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
C +IH+ VL+ + Y + G + A+++ +M D+
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
+WN++I G Q EA+ F M G + ++V++ ++A +L L G +H Y
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAY 411
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
++ D N+ V N +IDMYSKC F M K LI+W T+I +A N +
Sbjct: 412 VIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH-DKDLISWTTVIAGYAQNDCHVE 470
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACN--HAGLVEEGVRLFDLMKG---SVVKPNMKHY 347
AL+L +A + D + + L A + + L+ + + L KG +V++
Sbjct: 471 ALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQ------ 524
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+VD+ G+ + A S+ DVV W S++ +S GN A R++VE G
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKG-KDVVSWTSMISSSALNGNESEAVELFRRMVETG 582
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 117/278 (42%), Gaps = 16/278 (5%)
Query: 18 SLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAAD-------LSFAAQIFRRIQNPS 70
S++ + ++ + H H R LL+ + D + +A ++F I+
Sbjct: 492 SILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKD 551
Query: 71 TNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHS 130
W +++ A++ ++A+ +R + + D++ L A ++ +IH
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 611
Query: 131 QVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNE 190
+LR GF YA GDL +A+ VFD + ++ + + +MI+
Sbjct: 612 YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKA 671
Query: 191 AIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE-----IVHGYIVDEKLDMNVIVC 245
A+ LF +M+ E P+ ++ L L ACS G L +G + H Y ++ + V
Sbjct: 672 AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV--- 728
Query: 246 NAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
++DM + V +A+ + M + W ++ A
Sbjct: 729 -CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 148/466 (31%), Positives = 234/466 (50%), Gaps = 40/466 (8%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S +++ A ++F + + + WN+++ + +A+ ++ + S + D +T +
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 111 FALKGCARALTFSEATQIHSQVL----------------------------RFGFDAX-- 140
+ CA ++H +V+ RF FD+
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 141 --XXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM 198
YA AA+ +F +M +R++ SWNA+I+G Q EA++LF +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 199 KEEGWRPNDVTVLGALSACSQLGALKQGE------IVHGYIVDEKLDMNVIVCNAVIDMY 252
K E P + L AC+ L L G + HG+ + ++ V N++IDMY
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
KCG V++ Y VF+ M + ++WN MI+ FA NG G +AL+L +M G PD ++
Sbjct: 438 VKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 313 LAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP 371
+ L AC HAG VEEG F M V P HY +VDLLGRAG ++EA I MP
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 372 MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKR 431
M PD V+W SLL A K + N+ + + + KL+E+ ++ G +VLLSN+YA +W DV
Sbjct: 557 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616
Query: 432 VREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMD 477
VR++M + V K PG S+ +I H F+ D+SHP K+I++ +D
Sbjct: 617 VRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLD 662
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 8/257 (3%)
Query: 153 KTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLG 212
K G LD A +F MP+RD +WN+M+SG AQ R EA+ F M +EG+ N+ +
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 213 ALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK 272
LSACS L + +G VH I +V + +A++DMYSKCG V+ A VF M +
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DR 216
Query: 273 SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF 332
++++WN++I F NG +ALD+ M V PD V+ + + AC ++ G +
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 333 D-LMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSL-----LGAS 386
++K ++ ++ + VD+ + RIKEA +SMP + +V+ S+ + AS
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP-IRNVIAETSMISGYAMAAS 335
Query: 387 KTYGNVEMAEMASRKLV 403
+ +MA R +V
Sbjct: 336 TKAARLMFTKMAERNVV 352
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 185/395 (46%), Gaps = 52/395 (13%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L A +FR + WN+++ G A + +A+ ++ + + ++ + + L
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
C+ ++ Q+HS + + F + Y+K G+++ AQ+VFDEM R++ SW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV- 234
N++I+ Q EA+ +F+ M E P++VT+ +SAC+ L A+K G+ VHG +V
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS------------------------- 269
++KL ++I+ NA +DMY+KC + +A +F +M
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 270 -----CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC----- 319
+++++WN +I + NG+ +AL L + + V P S+ L AC
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 320 ------NHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPML 373
H +++ G + + + N S++D+ + G ++E Y M M
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGN-----SLIDMYVKCGCVEEGYLVFRKM-ME 455
Query: 374 PDVVLWQSLL--GASKTYGNVEMAEMASRKLVEMG 406
D V W +++ A YGN E E+ R+++E G
Sbjct: 456 RDCVSWNAMIIGFAQNGYGN-EALELF-REMLESG 488
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 122/271 (45%), Gaps = 22/271 (8%)
Query: 30 ITTGKFHFH--PSRTKLLELCAISP---AADLSFAAQIFRRIQNPSTNDWNAVLRGLAMS 84
I +F F P R + E IS AA A +F ++ + WNA++ G +
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364
Query: 85 PQPTQAISWYRSVSRSPQKVDALTCSFA--LKGCARALTFSEATQIHSQVLRFGF----- 137
+ +A+S + + R + V SFA LK CA Q H VL+ GF
Sbjct: 365 GENEEALSLFCLLKR--ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSG 422
Query: 138 -DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFK 196
+ Y K G ++ VF +M +RD SWNAMI G AQ NEA+ LF+
Sbjct: 423 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 482
Query: 197 RMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVC----NAVIDMY 252
M E G +P+ +T++G LSAC G +++G Y D V ++D+
Sbjct: 483 EMLESGEKPDHITMIGVLSACGHAGFVEEG---RHYFSSMTRDFGVAPLRDHYTCMVDLL 539
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
+ GF+++A S+ + M + W +++ A
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 33/193 (17%)
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKC-------------------------------GF 257
VH ++ + + N +ID YSKC GF
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 258 VDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALC 317
+D+A S+F++M + TWN+M+ FA + +AL M +G + S+ + L
Sbjct: 102 LDEADSLFRSMP-ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 318 ACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVV 377
AC+ + +GV++ L+ S ++ ++VD+ + G + +A + M +VV
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD-RNVV 219
Query: 378 LWQSLLGASKTYG 390
W SL+ + G
Sbjct: 220 SWNSLITCFEQNG 232
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 249/497 (50%), Gaps = 50/497 (10%)
Query: 19 LIHIKQLQAHLITTGKF----HFHPSRTKL-LELCAISPAADLSFAAQIFRRIQNPSTND 73
L +KQ+ H+I +G + S K +EL + A ++F R+ +P +
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMEL------GNFGVAEKVFARMPHPDVSS 199
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+N ++ G A +A+ Y + + D T L C +H +
Sbjct: 200 FNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIE 259
Query: 134 RFG-----------------------------FDAXXXXXX----XXXXXYAKTGDLDAA 160
R G FDA + + GD++AA
Sbjct: 260 RRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAA 319
Query: 161 QKVFDEMPKRDIASWNAMISGLAQ-GSRPNEAIALFKRMK-EEGWRPNDVTVLGALSACS 218
Q VFD+MPKRD+ SWN+++ G ++ G LF M E +P+ VT++ +S +
Sbjct: 320 QAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAA 379
Query: 219 QLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWN 278
G L G VHG ++ +L + + +A+IDMY KCG +++A+ VF+ + K + W
Sbjct: 380 NNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWT 438
Query: 279 TMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS 338
+MI A +G+G +AL L +M +GV P+ V+ LA L AC+H+GLVEEG+ +F+ MK
Sbjct: 439 SMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK 498
Query: 339 V-VKPNMKHYGSVVDLLGRAGRIKEAYDTIN-SMPMLPDVVLWQSLLGASKTYGNVEMAE 396
P +HYGS+VDLL RAGR++EA D + MPM P +W S+L A + ++E AE
Sbjct: 499 FGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAE 558
Query: 397 MASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKI 456
+A +L+++ G +VLLSN+YA RW + REAM + V+K G+S +
Sbjct: 559 LALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGL 618
Query: 457 HKFINGD-QSHPNWKEI 472
H+F+ + Q+HP W EI
Sbjct: 619 HRFVAAEKQNHPRWTEI 635
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 180/428 (42%), Gaps = 44/428 (10%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQ-NPSTNDW 74
C+S KQ+ A ++ ++L+ AI+ +L A +F NP+ +
Sbjct: 44 CNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVY 103
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
N ++ A+S + Y S+ R D T + +K + SE QIH ++
Sbjct: 104 NTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIV 158
Query: 135 FG-FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
G Y + G+ A+KVF MP D++S+N MI G A+ EA+
Sbjct: 159 SGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALK 218
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK--LDMNVIVCNAVIDM 251
L+ +M +G P++ TVL L C L ++ G+ VHG+I N+I+ NA++DM
Sbjct: 219 LYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDM 278
Query: 252 YSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMA---------- 301
Y KC A F M K + +WNTM++ F GD A + DQM
Sbjct: 279 YFKCKESGLAKRAFDAMK-KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSL 337
Query: 302 -----------------------LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS 338
++ V PD V+ ++ + + G + G + L+
Sbjct: 338 LFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRL 397
Query: 339 VVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMA 398
+K + +++D+ + G I+ A+ + DV LW S++ +GN + A
Sbjct: 398 QLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE-KDVALWTSMITGLAFHGNGQQALQL 456
Query: 399 SRKLVEMG 406
++ E G
Sbjct: 457 FGRMQEEG 464
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/440 (32%), Positives = 230/440 (52%), Gaps = 15/440 (3%)
Query: 54 ADLSFAAQIFRRIQ--NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSF 111
DL A +F I + + WN++ + ++ + A Y + R K D T
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFIN 261
Query: 112 ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD 171
C T ++ IHS + G D Y+K+ D +A+ +FD M R
Sbjct: 262 LAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRT 321
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
SW MISG A+ +EA+ALF M + G +P+ VT+L +S C + G+L+ G+ +
Sbjct: 322 CVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI-- 379
Query: 232 YIVDEKLDM------NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFA 285
D + D+ NV++CNA+IDMYSKCG + +A +F N + K+++TW TMI +A
Sbjct: 380 ---DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN-TPEKTVVTWTTMIAGYA 435
Query: 286 MNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNM 344
+NG +AL L +M P+ +++LA L AC H+G +E+G F +MK + P +
Sbjct: 436 LNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGL 495
Query: 345 KHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE 404
HY +VDLLGR G+++EA + I +M PD +W +LL A K + NV++AE A+ L
Sbjct: 496 DHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFN 555
Query: 405 MGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQ 464
+ +V ++N+YAA W R+R M ++++K PG S +++ K H F G+
Sbjct: 556 LEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEH 615
Query: 465 SHPNWKEIYAKMDEIKFRIK 484
H + IY ++ + K
Sbjct: 616 GHVENEVIYFTLNGLSLFAK 635
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 15/343 (4%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
+ +AA++F R+ WNA+L G S +A S +R + + D++T ++
Sbjct: 103 VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS 162
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK--RDIA 173
+ + +H+ +R G D Y K GDLD+A+ VF+ + + R +
Sbjct: 163 ASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 222
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
SWN+M + +A L+ M E ++P+ T + ++C L QG ++H +
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ D ++ N I MYSK A +F M+ +++ ++W MI +A GD +A
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMT-SRTCVSWTVMISGYAEKGDMDEA 341
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG------VRLFDLMKGSVVKPNMKHY 347
L L M G PD V+ L+ + C G +E G ++ + +V+ N
Sbjct: 342 LALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICN---- 397
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+++D+ + G I EA D ++ P VV W +++ G
Sbjct: 398 -ALIDMYSKCGSIHEARDIFDNTPE-KTVVTWTTMIAGYALNG 438
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 131/269 (48%), Gaps = 1/269 (0%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARAL 120
+++R S N WN +R P +++ +R + R + + T F K CAR
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 121 TFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMIS 180
+H+ +++ F + + K +D A KVF+ MP+RD +WNAM+S
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
G Q ++A +LF+ M+ P+ VTV+ + + S +LK E +H + +D+
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMS-CTKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
V V N I Y KCG +D A VF+ + +++++WN+M A+++ G+ + A L
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCL 246
Query: 300 MALDGVHPDAVSYLAALCACNHAGLVEEG 328
M + PD +++ +C + + +G
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQG 275
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 252/489 (51%), Gaps = 33/489 (6%)
Query: 45 LELCAISPAAD-------LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSV 97
L++C + A D L+ A ++F ++ WNA++ + + + + + S+
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 98 SRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL 157
RS + D T LK C + +IHS +++ G + Y+K G +
Sbjct: 475 LRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 158 DAAQKVFDEMPKRD--------------------IASWNAMISGLAQGSRPNEAIALFKR 197
+ A+K+ +R SWN++ISG + +A LF R
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 198 MKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGF 257
M E G P+ T L C+ L + G+ +H ++ ++L +V +C+ ++DMYSKCG
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 653
Query: 258 VDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALC 317
+ + +F+ S + +TWN MI +A +G G +A+ L ++M L+ + P+ V++++ L
Sbjct: 654 LHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILR 712
Query: 318 ACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDV 376
AC H GL+++G+ F +MK + P + HY ++VD+LG++G++K A + I MP D
Sbjct: 713 ACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADD 772
Query: 377 VLWQSLLGASKTY-GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREA 435
V+W++LLG + NVE+AE A+ L+ + + LLSNVYA W V +R
Sbjct: 773 VIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRN 832
Query: 436 MITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLV 495
M ++K PG S+ E+ ++H F+ GD++HP W+EIY ++ I +K + ++ V
Sbjct: 833 MRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVRGV 892
Query: 496 LHDIGEEDK 504
++ EED+
Sbjct: 893 --EVEEEDQ 899
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 168/369 (45%), Gaps = 29/369 (7%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARAL 120
++F+ I ++ W+A++ G + + A+ +++ + + V + L+ CA
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 121 TFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMIS 180
Q+H+ L+ F A YAK ++ AQ +FD + S+NAMI+
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
G +Q +A+ LF R+ G +++++ G AC+ + L +G ++G + L +
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 415
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
+V V NA IDMY KC + +A+ VF M + ++WN +I A NG GY+ L L M
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV----VDLLGR 356
+ PD ++ + L AC G + G+ + S+VK M SV +D+ +
Sbjct: 475 LRSRIEPDEFTFGSILKACT-GGSLGYGMEI----HSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 357 AGRIKEA-------------------YDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEM 397
G I+EA + +++ + V W S++ E A+M
Sbjct: 530 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 398 ASRKLVEMG 406
+++EMG
Sbjct: 590 LFTRMMEMG 598
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 154/340 (45%), Gaps = 2/340 (0%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S + D+ A F + WN++L G + + ++I + + R + D T +
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
LK C+ S QIH V+R G D YAK + +VF +P++
Sbjct: 185 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
+ SW+A+I+G Q + + A+ FK M++ + L +C+ L L+ G +H
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
+ + + IV A +DMY+KC + A +F N S + ++N MI ++ G
Sbjct: 305 AHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-SENLNRQSYNAMITGYSQEEHG 363
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV 350
+KAL L ++ G+ D +S AC + EG++++ L S + ++ +
Sbjct: 364 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA 423
Query: 351 VDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+D+ G+ + EA+ + M D V W +++ A + G
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRR-RDAVSWNAIIAAHEQNG 462
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y+K+ D+ A F+ MP RD+ SWN+M+SG Q ++I +F M EG + T
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
L CS L G +HG +V D +V+ +A++DMY+K ++ VFQ +
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP- 242
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
K+ ++W+ +I N AL +M Y + L +C
Sbjct: 243 EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 231/455 (50%), Gaps = 37/455 (8%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F + WN ++ G A +A+ +Y+ RS K + + + L C +
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 119 ALTFSEATQIHSQVLRFGF-----------DAXXXXXXXXXXX----------------- 150
+ Q H QVL GF DA
Sbjct: 192 SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTL 251
Query: 151 ---YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPND 207
YAK GD++AA+K+F EMP+++ SW A+I+G + N A+ LF++M G +P
Sbjct: 252 ISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQ 311
Query: 208 VTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQN 267
T L A + + +L+ G+ +HGY++ + N IV +++IDMYSK G ++ + VF+
Sbjct: 312 FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRI 371
Query: 268 MSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEE 327
+ WNTMI A A +G G+KAL +LD M V P+ + + L AC+H+GLVEE
Sbjct: 372 CDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEE 431
Query: 328 GVRLFDLMK-GSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGAS 386
G+R F+ M + P+ +HY ++DLLGRAG KE I MP PD +W ++LG
Sbjct: 432 GLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVC 491
Query: 387 KTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPG 446
+ +GN E+ + A+ +L+++ S ++LLS++YA +W V+++R M + V K
Sbjct: 492 RIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKA 551
Query: 447 FSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKF 481
S+ EI+ K+ F D SH +A+ +EI F
Sbjct: 552 VSWIEIEKKVEAFTVSDGSHA-----HARKEEIYF 581
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 30/270 (11%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y K+G L A+ VFD MP+RD+ SWN M+ G AQ +EA+ +K + G + N+ +
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
G L+AC + L+ HG ++ NV++ ++ID Y+KCG ++ A F M+
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 271 ------------------------------TKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
K+ ++W +I + G G +ALDL +M
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
GV P+ ++ + LCA + G + M + V+PN S++D+ ++G +
Sbjct: 303 IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 361 KEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ + D V W +++ A +G
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHG 392
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 34/260 (13%)
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWR-PNDVTVLGALSACSQLGALKQGE 227
KR I + +S A + ++A++ + + ++G R P D+ + L C +LKQG+
Sbjct: 8 KRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDL-LASLLQQCGDTKSLKQGK 66
Query: 228 IVHGYIVDEKLDM-NVIVCNAVIDMYSKCGFVDKAYSVFQNMSC---------------- 270
+H ++ N ++ N +I MY KCG A VF M
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKS 126
Query: 271 --------------TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
+ +++WNTM++ +A +G+ ++AL + G+ + S+ L
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 317 CACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDV 376
AC + ++ + + + N+ S++D + G+++ A + M + D+
Sbjct: 187 TACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT-VKDI 245
Query: 377 VLWQSLLGASKTYGNVEMAE 396
+W +L+ G++E AE
Sbjct: 246 HIWTTLISGYAKLGDMEAAE 265
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 209/347 (60%), Gaps = 3/347 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y G+L+ A+ +F++MP +DI SW MI G +Q R EAIA+F +M EEG P++VT+
Sbjct: 976 YMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTM 1035
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+SAC+ LG L+ G+ VH Y + ++V + +A++DMYSKCG +++A VF N+
Sbjct: 1036 STVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP- 1094
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
K+L WN++I A +G +AL + +M ++ V P+AV++++ AC HAGLV+EG R
Sbjct: 1095 KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRR 1154
Query: 331 LF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
++ ++ + N++HYG +V L +AG I EA + I +M P+ V+W +LL + +
Sbjct: 1155 IYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH 1214
Query: 390 GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKV-PGFS 448
N+ +AE+A KL+ + + G + LL ++YA + RW DV +R M + K+ PG S
Sbjct: 1215 KNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTS 1274
Query: 449 YTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLV 495
ID + H F D+SH E+ +DEI ++ GY +T+ V
Sbjct: 1275 SIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 108/229 (47%), Gaps = 1/229 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
+L A +F ++ W +++G + + + +AI+ + + D +T S +
Sbjct: 980 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
CA ++H L+ GF Y+K G L+ A VF +PK+++
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1099
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
WN++I GLA EA+ +F +M+ E +PN VT + +AC+ G + +G ++ +
Sbjct: 1100 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Query: 234 VDE-KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
+D+ + NV ++ ++SK G + +A + NM + + W ++
Sbjct: 1160 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 223/429 (51%), Gaps = 4/429 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F+ I W+ V+ + +A+ + + + + T L+ CA
Sbjct: 217 AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA 276
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
A + + H +R G + Y K + A VF +P++D+ SW A+
Sbjct: 277 AHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVAL 336
Query: 179 ISGLAQGSRPNEAIALFKRMK-EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
ISG + +I F M E RP+ + ++ L +CS+LG L+Q + H Y++
Sbjct: 337 ISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYG 396
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
D N + +++++YS+CG + A VF ++ K + W ++I + ++G G KAL+
Sbjct: 397 FDSNPFIGASLVELYSRCGSLGNASKVFNGIAL-KDTVVWTSLITGYGIHGKGTKALETF 455
Query: 298 DQMALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLG 355
+ M V P+ V++L+ L AC+HAGL+ EG+R+F LM + PN++HY +VDLLG
Sbjct: 456 NHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLG 515
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVL 415
R G + A + MP P + +LLGA + + N EMAE ++KL E+ SN G ++L
Sbjct: 516 RVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYML 575
Query: 416 LSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAK 475
+SNVY + W +V+++R ++ + ++K S EI K+H+F+ D+ HP + +Y
Sbjct: 576 MSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGL 635
Query: 476 MDEIKFRIK 484
+ E+ +K
Sbjct: 636 LKELDLHMK 644
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 178/371 (47%), Gaps = 15/371 (4%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A Q+F + S WN +L+ L+ Q + + + + R +K D T ALK C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 119 ALTFSEATQIHSQVLR-FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
+ IH V + + Y K G + A ++FDE+ K DI +W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 178 MISGLAQGSRPNEAIALFKRM-KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDE 236
M+SG + P +A+ F+RM P+ VT++ +SAC++L + G VHG+++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDL 296
++ + N++++ Y+K +A ++F+ M K +I+W+T+I + NG +AL +
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 297 LDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGR 356
+ M DG P+ + L L AC A +E+G + +L ++ +K ++VD+ +
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE-----MGSNSCG 411
+EAY + +P DVV W +L+ G MA R + E + +N+
Sbjct: 312 CFSPEEAYAVFSRIPR-KDVVSWVALISGFTLNG------MAHRSIEEFSIMLLENNTRP 364
Query: 412 DFVLLSNVYAA 422
D +L+ V +
Sbjct: 365 DAILMVKVLGS 375
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 175/395 (44%), Gaps = 7/395 (1%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRS-VSRSPQKVDALTCSFALKGCA 117
A ++F ++ P W++++ G + P QA+ ++R V S D +T + C
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
+ +H V+R GF YAK+ A +F + ++D+ SW+
Sbjct: 175 KLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWST 234
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+I+ Q EA+ +F M ++G PN TVL L AC+ L+QG H + +
Sbjct: 235 VIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG 294
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
L+ V V A++DMY KC ++AY+VF + K +++W +I F +NG +++++
Sbjct: 295 LETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIEEF 353
Query: 298 DQMALD-GVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGR 356
M L+ PDA+ + L +C+ G +E+ + N S+V+L R
Sbjct: 354 SIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSR 413
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLL 416
G + A N + L D V+W SL+ +G A +V+ + L
Sbjct: 414 CGSLGNASKVFNGIA-LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFL 472
Query: 417 SNVYAARQR--WHDVKRVREAMITKDVRKVPGFSY 449
S + A H+ R+ + M+ D R P +
Sbjct: 473 SILSACSHAGLIHEGLRIFKLMVN-DYRLAPNLEH 506
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 143/519 (27%), Positives = 269/519 (51%), Gaps = 15/519 (2%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A+++F + +P+ W ++ GL + + + + +T S L+ C++
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+IH+ +LR D YA + +D A V M +RD ++ ++
Sbjct: 440 LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSL 499
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
++ + + A+++ M +G R + +++ G +SA + LGAL+ G+ +H Y V
Sbjct: 500 VTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGF 559
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
V N+++DMYSKCG ++ A VF+ ++ T +++WN ++ A NG AL +
Sbjct: 560 SGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFE 618
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRA 357
+M + PD+V++L L AC++ L + G+ F +MK ++P ++HY +V +LGRA
Sbjct: 619 EMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRA 678
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLS 417
GR++EA + +M + P+ +++++LL A + GN+ + E + K + + + ++LL+
Sbjct: 679 GRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLA 738
Query: 418 NVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKE-IYAKM 476
++Y + ++ R M K + K G S E+ K+H F++ D + + IYA++
Sbjct: 739 DLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEI 798
Query: 477 DEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNL 536
+ IK IK +G + + +NA ++HS K AV YG I P+ V+KN
Sbjct: 799 ESIKEEIKRFGSPYRGN-----------ENA-SFHSAKQAVVYGFIYASPEAPVHVVKNK 846
Query: 537 RICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSC 575
+C DCH + I++ + +++I VRD + FK G CSC
Sbjct: 847 ILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 9/276 (3%)
Query: 114 KGCARALTFSEAT------QIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEM 167
K C R L+F E+ IH V++FG Y KT + A+K+FDEM
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 168 PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE 227
R + +W MIS + A++LF+ M G PN+ T + +C+ L + G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
VHG ++ + N +V +++ D+YSKCG +A +F ++ + I+W MI +
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADT-ISWTMMISSLVGA 203
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY 347
+AL +M GV P+ +++ L A + GL E G + + + N+
Sbjct: 204 RKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLK 262
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
S+VD + ++++A +NS DV LW S++
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSSGE-QDVFLWTSVV 297
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 165/381 (43%), Gaps = 14/381 (3%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F + + + W ++ S + A+S + + S + T S ++ CA
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
S ++H V++ GF+ Y+K G A ++F + D SW M
Sbjct: 137 LRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMM 196
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
IS L + EA+ + M + G PN+ T + L A S LG L+ G+ +H I+ +
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGI 255
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
+NV++ +++D YS+ ++ A V N S + + W +++ F N +A+
Sbjct: 256 PLNVVLKTSLVDFYSQFSKMEDAVRVL-NSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFL 314
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
+M G+ P+ +Y A L C+ ++ G ++ + + ++VD+ +
Sbjct: 315 EMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCS 374
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVE-----MAEMASRKLVEMGSNSCGDF 413
+ + + P+VV W +L+ +G V+ + EM R++ +
Sbjct: 375 ASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP-------NV 427
Query: 414 VLLSNVYAARQRWHDVKRVRE 434
V LS V A + V+RV E
Sbjct: 428 VTLSGVLRACSKLRHVRRVLE 448
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 151/338 (44%), Gaps = 4/338 (1%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F +QN T W ++ L + + +A+ +Y + ++ + T L G +
Sbjct: 178 ACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF-VKLLGASS 236
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
L IHS ++ G Y++ ++ A +V + ++D+ W ++
Sbjct: 237 FLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSV 296
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
+SG + R EA+ F M+ G +PN+ T LS CS + +L G+ +H +
Sbjct: 297 VSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGF 356
Query: 239 DMNVIVCNAVIDMYSKCGFVD-KAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
+ + V NA++DMY KC + +A VF M + ++++W T+I+ +G LL
Sbjct: 357 EDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDHGFVQDCFGLL 415
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRA 357
+M V P+ V+ L AC+ V + + + V M S+VD +
Sbjct: 416 MEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASS 475
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
++ A++ I SM D + + SL+ G EMA
Sbjct: 476 RKVDYAWNVIRSMKR-RDNITYTSLVTRFNELGKHEMA 512
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 208/378 (55%), Gaps = 2/378 (0%)
Query: 96 SVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTG 155
SV R DA S A++ C F + H L+ GF + Y +G
Sbjct: 110 SVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSG 169
Query: 156 DLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALS 215
+++ A KVF+EMP+R++ SW AMISG AQ R + + L+ +M++ PND T LS
Sbjct: 170 EVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLS 229
Query: 216 ACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI 275
AC+ GAL QG VH + L + + N++I MY KCG + A+ +F S K ++
Sbjct: 230 ACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVV 288
Query: 276 TWNTMIMAFAMNGDGYKALDLLD-QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDL 334
+WN+MI +A +G +A++L + M G PDA++YL L +C HAGLV+EG + F+L
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 335 MKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEM 394
M +KP + HY +VDLLGR G ++EA + I +MPM P+ V+W SLL + + +G+V
Sbjct: 349 MAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWT 408
Query: 395 AEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDC 454
A+ + + + + V L+N+YA+ W + VR+ M K ++ PG S+ EI+
Sbjct: 409 GIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINN 468
Query: 455 KIHKFINGDQSHPNWKEI 472
+ F D S+ EI
Sbjct: 469 YVFMFKAEDGSNCRMLEI 486
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 135/295 (45%), Gaps = 8/295 (2%)
Query: 53 AADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFA 112
+ ++ A ++F + + W A++ G A + + Y + +S + T +
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L C + + +H Q L G + Y K GDL A ++FD+ +D+
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Query: 173 ASWNAMISGLAQGSRPNEAIALFK-RMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
SWN+MI+G AQ +AI LF+ M + G +P+ +T LG LS+C G +K+G
Sbjct: 288 VSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFN 347
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGY 291
+ + L + + ++D+ + G + +A + +NM + + W +++ + ++GD +
Sbjct: 348 LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVW 407
Query: 292 KALDLLDQMALDGVHPDAVS---YLAALCACNHAGLVEEGVRLFDLMKGSVVKPN 343
+ ++ + + PD + LA L A G +E + LMK +K N
Sbjct: 408 TGIRAAEERLM--LEPDCAATHVQLANLYA--SVGYWKEAATVRKLMKDKGLKTN 458
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 229/436 (52%), Gaps = 9/436 (2%)
Query: 48 CAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQ--KVD 105
C P A L +F+ ++ W +++ GL + + +A+ + + K D
Sbjct: 421 CGCDPDAYL-----VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPD 475
Query: 106 ALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFD 165
+ + CA Q+H +++ G Y+K G + A KVF
Sbjct: 476 SDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFT 535
Query: 166 EMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ 225
M ++ +WN+MIS ++ + P +I LF M +G P+ V++ L A S +L +
Sbjct: 536 SMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLK 595
Query: 226 GEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFA 285
G+ +HGY + + + + NA+IDMY KCGF A ++F+ M KSLITWN MI +
Sbjct: 596 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ-HKSLITWNLMIYGYG 654
Query: 286 MNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNM 344
+GD AL L D+M G PD V++L+ + ACNH+G VEEG +F+ MK ++PNM
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 345 KHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE 404
+HY ++VDLLGRAG ++EAY I +MP+ D +W LL AS+T+ NVE+ +++ KL+
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLR 774
Query: 405 MGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQ 464
M +V L N+Y ++ ++ M K + K PG S+ E+ + + F +G
Sbjct: 775 MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGS 834
Query: 465 SHPNWKEIYAKMDEIK 480
S P EI+ ++ +K
Sbjct: 835 SSPMKAEIFNVLNRLK 850
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 184/377 (48%), Gaps = 18/377 (4%)
Query: 23 KQLQAHLITTGKFHFHPSR-TKLLEL---CAISPAADLSFAAQIFRRIQNPSTNDWNAVL 78
+Q+ ++ G H P T LL + C + A+ F+ + +R++ WNA++
Sbjct: 292 RQIHCDVVKMG-LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLE-----IWNAMV 345
Query: 79 RGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFD 138
A + A+ + + + D+ T S + C+ ++ +H+++ +
Sbjct: 346 AAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQ 405
Query: 139 AXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM 198
+ Y+K G A VF M ++D+ +W ++ISGL + + EA+ +F M
Sbjct: 406 STSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDM 465
Query: 199 K--EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCG 256
K ++ +P+ + +AC+ L AL+ G VHG ++ L +NV V +++ID+YSKCG
Sbjct: 466 KDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCG 525
Query: 257 FVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
+ A VF +MS T++++ WN+MI ++ N ++DL + M G+ PD+VS + L
Sbjct: 526 LPEMALKVFTSMS-TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584
Query: 317 CACNHAGLVEEGVRL--FDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLP 374
A + + +G L + L G ++K+ +++D+ + G K A + M
Sbjct: 585 VAISSTASLLKGKSLHGYTLRLGIPSDTHLKN--ALIDMYVKCGFSKYAENIFKKMQH-K 641
Query: 375 DVVLWQSLLGASKTYGN 391
++ W ++ ++G+
Sbjct: 642 SLITWNLMIYGYGSHGD 658
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 13/332 (3%)
Query: 59 AAQIFRRIQNPSTND-WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCA 117
A ++F I++ S WN ++ G S ++ Y + K+ + + + AL C+
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
++ QIH V++ G Y+K G + A+ VF + + + WNA
Sbjct: 284 QSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNA 343
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
M++ A+ A+ LF M+++ P+ T+ +S CS LG G+ VH +
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
+ + +A++ +YSKCG AY VF++M K ++ W ++I NG +AL +
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKVF 462
Query: 298 DQMA--LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKP----NMKHYGSVV 351
M D + PD+ + AC AGL E +R + GS++K N+ S++
Sbjct: 463 GDMKDDDDSLKPDSDIMTSVTNAC--AGL--EALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 352 DLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
DL + G + A SM ++V W S++
Sbjct: 519 DLYSKCGLPEMALKVFTSMST-ENMVAWNSMI 549
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 116/258 (44%), Gaps = 10/258 (3%)
Query: 75 NAVLRGLAMSPQPTQAISWY-RSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
N+ +R L + QA+ Y + SP T LK C+ S IH V+
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE-------MPKRDIASWNAMISGLAQGS 186
G+ Y K G LD A +VFD + RD+ WN+MI G +
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 187 RPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALK--QGEIVHGYIVDEKLDMNVIV 244
R E + F+RM G RP+ ++ +S + G + +G+ +HG+++ LD + +
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG 304
A+IDMY K G A+ VF + +++ WN MI+ F +G +LDL +
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNS 267
Query: 305 VHPDAVSYLAALCACNHA 322
V + S+ AL AC+ +
Sbjct: 268 VKLVSTSFTGALGACSQS 285
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 246/463 (53%), Gaps = 41/463 (8%)
Query: 22 IKQLQAHLITTGKFHF-HPSRTKLLELCAISPA-ADLSFAAQIFRRIQNPSTNDWNAVLR 79
+ ++ AHL+ HF H S L +I + ++ +A ++F IQNP+ +NA+++
Sbjct: 20 LPEIHAHLLR----HFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIK 75
Query: 80 GLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDA 139
++ P +++S++ S+ D T + LK C+ +H +++R GF
Sbjct: 76 CYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHR 135
Query: 140 XXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD---------------------------- 171
Y G + AQKVFDEM +R+
Sbjct: 136 LGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMS 195
Query: 172 ---IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
I SWN+MIS L++ R EA+ LF M ++G+ P++ TV+ L + LG L G+
Sbjct: 196 ERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKW 255
Query: 229 VHGYIVDEKLDMNVI-VCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
+H L + I V NA++D Y K G ++ A ++F+ M +++++WNT+I A+N
Sbjct: 256 IHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVN 314
Query: 288 GDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMK 345
G G +DL D M +G V P+ ++L L C++ G VE G LF LM ++ +
Sbjct: 315 GKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTE 374
Query: 346 HYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
HYG++VDL+ R+GRI EA+ + +MP+ + +W SLL A +++G+V++AE+A+ +LV++
Sbjct: 375 HYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKI 434
Query: 406 GSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
+ G++VLLSN+YA RW DV++VR M +RK G S
Sbjct: 435 EPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 222/410 (54%), Gaps = 5/410 (1%)
Query: 71 TNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHS 130
T + L+GL ++ + +A+ S S +V+ T + L+ C + +++ +IH+
Sbjct: 76 TEKLDKTLKGLCVTGRLKEAVGLLWS---SGLQVEPETYAVLLQECKQRKEYTKGKRIHA 132
Query: 131 QVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNE 190
Q+ GF YA +GDL A +F + RD+ WNAMISG Q E
Sbjct: 133 QMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQE 192
Query: 191 AIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVID 250
+ ++ M++ P+ T ACS L L+ G+ H ++ + N+IV +A++D
Sbjct: 193 GLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVD 252
Query: 251 MYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAV 310
MY KC + VF +S T+++ITW ++I + +G + L ++M +G P+ V
Sbjct: 253 MYFKCSSFSDGHRVFDQLS-TRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPV 311
Query: 311 SYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINS 369
++L L ACNH GLV++G F MK ++P +HY ++VD LGRAGR++EAY+ +
Sbjct: 312 TFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMK 371
Query: 370 MPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDV 429
P +W SLLGA + +GNV++ E+A+ K +E+ + G++V+ +N YA+
Sbjct: 372 SPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAA 431
Query: 430 KRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEI 479
+VR M V+K PG+S E+ ++H+F+ D SH ++IY K+ E+
Sbjct: 432 SKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEM 481
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 146/339 (43%), Gaps = 6/339 (1%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
K++ A + G + KLL L A+S DL A +FR ++ WNA++ G
Sbjct: 128 KRIHAQMFVVGFALNEYLKVKLLILYALS--GDLQTAGILFRSLKIRDLIPWNAMISGYV 185
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
+ + Y + ++ D T + + C+ + H+ +++ +
Sbjct: 186 QKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNII 245
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
Y K +VFD++ R++ +W ++ISG + +E + F++MKEEG
Sbjct: 246 VDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG 305
Query: 203 WRPNDVTVLGALSACSQLGALKQG-EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKA 261
RPN VT L L+AC+ G + +G E + D ++ A++D + G + +A
Sbjct: 306 CRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
Query: 262 YSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
Y C + W +++ A ++G+ K L+L L+ + +Y+
Sbjct: 366 YEFVMKSPCKEHPPVWGSLLGACRIHGN-VKLLELAATKFLELDPTNGGNYVVFANGYAS 424
Query: 322 AGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
GL E ++ M+ + VK + + S ++L G R
Sbjct: 425 CGLREAASKVRRKMENAGVKKDPGY--SQIELQGEVHRF 461
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 201/335 (60%), Gaps = 14/335 (4%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y TG +D A+ +F+ P +D+ W AM++G Q +R +EA+ LF+ M+ G RP++ +
Sbjct: 223 YVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVL 282
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+ L+ C+Q GAL+QG+ +HGYI + ++ ++ +V A++DMY+KCG ++ A VF +
Sbjct: 283 VSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK- 341
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+ +W ++I AMNG +ALDL +M GV DA++++A L ACNH G V EG +
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 331 LFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPD---VVLWQSLLGAS 386
+F M + V+P +H ++DLL RAG + EA + I+ M D V ++ SLL A+
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAA 461
Query: 387 KTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPG 446
+ YGNV++AE + KL ++ + LL++VYA+ RW DV VR M +RK PG
Sbjct: 462 RNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPG 521
Query: 447 FSYTEIDCKIHKFINGDQ--SHPNWKEIYAKMDEI 479
S EID H+FI GD SHP KMDEI
Sbjct: 522 CSSIEIDGVGHEFIVGDDLLSHP-------KMDEI 549
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 170/369 (46%), Gaps = 41/369 (11%)
Query: 66 IQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEA 125
+Q PS +N +L+ LA T+ ++ + + D T LK R E
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 126 TQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQG 185
++H ++ G + YA G ++ KVFDEMP+RD+ SWN +IS
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 186 SRPNEAIALFKRMKEEG-WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
R +AI +FKRM +E + ++ T++ LSACS L L+ GE ++ ++V E +M+V +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRI 184
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG---------------- 288
NA++DM+ KCG +DKA +VF +M K++ W +M+ + G
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 289 --------DGY-------KALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFD 333
+GY +AL+L M G+ PD ++ L C G +E+G +
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 334 LMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVE 393
+ + V + ++VD+ + G I+ A + + D W SL+ YG +
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE-RDTASWTSLI-----YG-LA 356
Query: 394 MAEMASRKL 402
M M+ R L
Sbjct: 357 MNGMSGRAL 365
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 209/389 (53%), Gaps = 2/389 (0%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSR-SPQKVDALTCSFALKGCARA 119
+F + + WN ++ + S +++I + + R S + D T L+ C+ +
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 120 LTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMI 179
IH L+ GF + Y G L A+K+FD+MP RD + AM
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 180 SGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLD 239
G Q +A+F+ M G+ + V ++ L AC QLGALK G+ VHG+ +
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 240 MNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
+ + + NA+ DMY KC +D A++VF NMS + +I+W+++I+ + ++GD + L D+
Sbjct: 268 LGLNLGNAITDMYVKCSILDYAHTVFVNMS-RRDVISWSSLILGYGLDGDVVMSFKLFDE 326
Query: 300 MALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGR 359
M +G+ P+AV++L L AC H GLVE+ F LM+ + P +KHY SV D + RAG
Sbjct: 327 MLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGL 386
Query: 360 IKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNV 419
++EA + MP+ PD + ++L K YGNVE+ E +R+L+++ +V L+ +
Sbjct: 387 LEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGL 446
Query: 420 YAARQRWHDVKRVREAMITKDVRKVPGFS 448
Y+A R+ + + +R+ M K + KVPG S
Sbjct: 447 YSAAGRFDEAESLRQWMKEKQISKVPGCS 475
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 212/410 (51%), Gaps = 14/410 (3%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F + W ++ G + +A+ + + P + C G R
Sbjct: 160 ACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPN-LATYVCVLVSSG--R 216
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
S IH +L+ Y K L A +VF E+ K+D SWN+M
Sbjct: 217 VGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSM 276
Query: 179 ISGLAQGSRPNEAIALFKRMK-EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
ISGL R EAI LF M+ G +P+ + LSAC+ LGA+ G VH YI+
Sbjct: 277 ISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG 336
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
+ + + A++DMY+KCG+++ A +F + +K++ TWN ++ A++G G ++L
Sbjct: 337 IKWDTHIGTAIVDMYAKCGYIETALEIFNGIR-SKNVFTWNALLGGLAIHGHGLESLRYF 395
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVK--PNMKHYGSVVDLLG 355
++M G P+ V++LAAL AC H GLV+EG R F MK P ++HYG ++DLL
Sbjct: 396 EEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLC 455
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNV-EMAEMASRKLVEMGSNSCGDFV 414
RAG + EA + + +MP+ PDV + ++L A K G + E+ + +++ G +V
Sbjct: 456 RAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYV 515
Query: 415 LLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQ 464
LLSN++AA +RW DV R+R M K + KVPG SY E KF+ DQ
Sbjct: 516 LLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE------KFMTLDQ 559
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 178/395 (45%), Gaps = 10/395 (2%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADL-SFAAQIFRRIQNP-STN 72
RC SL KQ+Q LIT K++ + +AD S+++ I I++ S+
Sbjct: 15 RCSSLRVFKQIQTQLITRDLLRDDLIINKVVTF--LGKSADFASYSSVILHSIRSVLSSF 72
Query: 73 DWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQV 132
+N +L A+ +P I Y++ + D T K C + E QIH V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 133 LRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAI 192
+ GF Y G+ A KVF EMP RD+ SW +I+G + EA+
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 193 ALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMY 252
F +M E PN T + L + ++G L G+ +HG I+ +++ NA+IDMY
Sbjct: 193 DTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMAL-DGVHPDAVS 311
KC + A VF + K ++WN+MI +A+DL M G+ PD
Sbjct: 250 VKCEQLSDAMRVFGELE-KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 312 YLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP 371
+ L AC G V+ G + + + + +K + ++VD+ + G I+ A + N +
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR 368
Query: 372 MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+V W +LLG +G+ + ++V++G
Sbjct: 369 S-KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG 402
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQ-KVDALTCSFALK 114
LS A ++F ++ WN+++ GL + +AI + + S K D + L
Sbjct: 255 LSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLS 314
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
CA +H +L G YAK G ++ A ++F+ + +++ +
Sbjct: 315 ACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFT 374
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
WNA++ GLA E++ F+ M + G++PN VT L AL+AC G + +G +
Sbjct: 375 WNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMK 434
Query: 235 DEKLDM--NVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
+ ++ + +ID+ + G +D+A + + M
Sbjct: 435 SREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAM 470
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 226/427 (52%), Gaps = 3/427 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F ++ W ++ G A + + +A+ +YR + D + L+
Sbjct: 170 AEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGD 229
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+H + R G YAK G ++ A +VF M + SW ++
Sbjct: 230 LGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSL 289
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
ISG AQ N+A M+ G++P+ VT++G L ACSQ+G+LK G +VH YI+ +
Sbjct: 290 ISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV 349
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
++ + A++DMYSKCG + + +F+++ K L+ WNTMI + ++G+G + + L
Sbjct: 350 -LDRVTATALMDMYSKCGALSSSREIFEHVG-RKDLVCWNTMISCYGIHGNGQEVVSLFL 407
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRA 357
+M + PD ++ + L A +H+GLVE+G F +M ++P+ KHY ++DLL RA
Sbjct: 408 KMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARA 467
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLS 417
GR++EA D INS + + +W +LL + N+ + ++A+ K++++ +S G L+S
Sbjct: 468 GRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVS 527
Query: 418 NVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMD 477
N +A +W +V +VR+ M + KVPG+S E++ ++ F+ D SH + +
Sbjct: 528 NFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLR 587
Query: 478 EIKFRIK 484
+K I+
Sbjct: 588 NLKTEIR 594
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 185/373 (49%), Gaps = 8/373 (2%)
Query: 21 HIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRG 80
HI Q+ A +I+TG S ++ L + + ++S+A ++F + + +N+++
Sbjct: 32 HITQIHAFVISTGNLLNGSSISRDL-IASCGRIGEISYARKVFDELPQRGVSVYNSMIVV 90
Query: 81 LAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAX 140
+ P + + Y + + D+ T + +K C L + + + + FG+
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150
Query: 141 XXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE 200
Y K G +D A+ +F +M KRD+ W M++G AQ + +A+ ++ M+
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 201 EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
EG+ + V +LG L A LG K G VHGY+ L MNV+V +++DMY+K GF++
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN 320
A VF M K+ ++W ++I FA NG KA + + +M G PD V+ + L AC+
Sbjct: 271 ASRVFSRM-MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS 329
Query: 321 HAGLVEEGVRLFD--LMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVL 378
G ++ G RL ++K V+ + +++D+ + G + + + + D+V
Sbjct: 330 QVGSLKTG-RLVHCYILKRHVL--DRVTATALMDMYSKCGALSSSREIFEHVGR-KDLVC 385
Query: 379 WQSLLGASKTYGN 391
W +++ +GN
Sbjct: 386 WNTMISCYGIHGN 398
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 216/409 (52%), Gaps = 3/409 (0%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
WN+++ G + A + + R + D T + L C+ +H V+
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVI 332
Query: 134 RFGFDAXXXXXXXXXXXYAK--TGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEA 191
+ G + Y + TG ++ A +F+ + +D+ SWN++I+G AQ +A
Sbjct: 333 KKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDA 392
Query: 192 IALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDM 251
+ F ++ + +D L +CS L L+ G+ +H N V +++I M
Sbjct: 393 VKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVM 452
Query: 252 YSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVS 311
YSKCG ++ A FQ +S S + WN MI+ +A +G G +LDL QM V D V+
Sbjct: 453 YSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVT 512
Query: 312 YLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
+ A L AC+H GL++EG+ L +LM+ ++P M+HY + VDLLGRAG + +A + I SM
Sbjct: 513 FTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 572
Query: 371 PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVK 430
P+ PD ++ ++ LG + G +EMA + L+E+ +V LS++Y+ ++W +
Sbjct: 573 PLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKA 632
Query: 431 RVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEI 479
V++ M + V+KVPG+S+ EI ++ F D+S+P ++IY + ++
Sbjct: 633 SVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDL 681
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 145/341 (42%), Gaps = 24/341 (7%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L +A +F + + WN ++ G + A + + RS VD + S LKG
Sbjct: 51 LGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKG 110
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
A F Q+H V++ G++ YAK ++ A + F E+ + + SW
Sbjct: 111 IASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSW 170
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPND-------VTVLGALSACSQLGALKQGEI 228
NA+I+G Q A L M+ + D +T+L C+ LKQ
Sbjct: 171 NALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCN---LLKQ--- 224
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG 288
VH ++ L + +CNA+I Y+ CG V A VF + +K LI+WN+MI F+ +
Sbjct: 225 VHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHE 284
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG 348
A +L QM V D +Y L AC+ EE + G V+K ++
Sbjct: 285 LKESAFELFIQMQRHWVETDIYTYTGLLSACSG----EEHQIFGKSLHGMVIKKGLEQVT 340
Query: 349 SVVDLLGR------AGRIKEAYDTINSMPMLPDVVLWQSLL 383
S + L G +++A S+ D++ W S++
Sbjct: 341 SATNALISMYIQFPTGTMEDALSLFESLKS-KDLISWNSII 380
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 13/260 (5%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y K G L A +FDEMPKRD SWN MISG + +A LF MK G + +
Sbjct: 45 YIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSF 104
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
L + + GE VHG ++ + NV V ++++DMY+KC V+ A+ F+ +S
Sbjct: 105 SRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISE 164
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALD-GVHPDAVSYLAALCACNHAGLVEEGV 329
S ++WN +I F D A LL M + V DA ++ L +
Sbjct: 165 PNS-VSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF----C 219
Query: 330 RLFDLMKGSVVKPNMKHYGSVVDLL----GRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
L + V+K ++H ++ + + G + +A + + D++ W S++
Sbjct: 220 NLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAG 279
Query: 386 SKTYGNVEMAEMASRKLVEM 405
+ E+ E A ++M
Sbjct: 280 ---FSKHELKESAFELFIQM 296
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 2/248 (0%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
K L +I G + L+ + P + A +F +++ WN+++ G A
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFA 384
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
A+ ++ + S KVD S L+ C+ T QIH+ + GF +
Sbjct: 385 QKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEF 444
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEM-PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEE 201
Y+K G +++A+K F ++ K +WNAMI G AQ ++ LF +M +
Sbjct: 445 VISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQ 504
Query: 202 GWRPNDVTVLGALSACSQLGALKQG-EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
+ + VT L+ACS G +++G E+++ K+ + A +D+ + G V+K
Sbjct: 505 NVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNK 564
Query: 261 AYSVFQNM 268
A + ++M
Sbjct: 565 AKELIESM 572
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 239/469 (50%), Gaps = 12/469 (2%)
Query: 17 HSLIHIKQLQAHLITTG---KFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTND 73
H L KQ+ + G H S + C I + A ++F + S
Sbjct: 543 HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI-----IKDARKVFSSLPEWSVVS 597
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
NA++ G + + + + ++R + +T + ++ C + + + TQ H Q+
Sbjct: 598 MNALIAGYSQNNLEEAVVLFQEMLTRGVNPSE-ITFATIVEACHKPESLTLGTQFHGQIT 656
Query: 134 RFGFDAXXXXXXXXXX-XYAKTGDLDAAQKVFDEMPK-RDIASWNAMISGLAQGSRPNEA 191
+ GF + Y + + A +F E+ + I W M+SG +Q EA
Sbjct: 657 KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Query: 192 IALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDM 251
+ +K M+ +G P+ T + L CS L +L++G +H I D++ + N +IDM
Sbjct: 717 LKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDM 776
Query: 252 YSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVS 311
Y+KCG + + VF M ++++WN++I +A NG AL + D M + PD ++
Sbjct: 777 YAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEIT 836
Query: 312 YLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
+L L AC+HAG V +G ++F++M G ++ + H +VDLLGR G ++EA D I +
Sbjct: 837 FLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQ 896
Query: 371 PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVK 430
+ PD LW SLLGA + +G+ E+++ KL+E+ + +VLLSN+YA++ W
Sbjct: 897 NLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKAN 956
Query: 431 RVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEI 479
+R+ M + V+KVPG+S+ +++ + H F GD+SH +I ++++
Sbjct: 957 ALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 168/350 (48%), Gaps = 3/350 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F + +P WN ++ G T AI ++ ++ +S K T L
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+H++ ++ G + Y+K ++AA KVF+ + +++ WNAM
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
I G A ++ + LF MK G+ +D T LS C+ L+ G H I+ +KL
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
N+ V NA++DMY+KCG ++ A +F+ M C + +TWNT+I ++ + + +A DL
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
+M L G+ D + L AC H + +G ++ L + ++ S++D+ + G
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSN 408
IK+A +S+P V + + G S+ N+E A + ++++ G N
Sbjct: 579 IIKDARKVFSSLPEWSVVSMNALIAGYSQN--NLEEAVVLFQEMLTRGVN 626
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 159/350 (45%), Gaps = 11/350 (3%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S + AA++F ++ + WNA++RG A + + + + + + S +D T +
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFT 432
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
L CA + +Q HS +++ YAK G L+ A+++F+ M R
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR 492
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
D +WN +I Q +EA LFKRM G + + L AC+ + L QG+ VH
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH 552
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
V LD ++ +++IDMYSKCG + A VF ++ S+++ N +I ++ N +
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSMNALIAGYSQN-NL 610
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV 350
+A+ L +M GV+P +++ + AC+ E + L G + K G
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKP----ESLTLGTQFHGQITKRGFSSEGEY 666
Query: 351 --VDLLG---RAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ LLG + + EA + + +VLW ++ G E A
Sbjct: 667 LGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 143/330 (43%), Gaps = 37/330 (11%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
+S A ++F I +P+T W + G + P +A+ + + + D L
Sbjct: 211 ISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF------ 264
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
T I++ Y + G L A+ +F EM D+ +W
Sbjct: 265 ---------VTVINT--------------------YIRLGKLKDARLLFGEMSSPDVVAW 295
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
N MISG + AI F M++ + T+ LSA + L G +VH +
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
L N+ V ++++ MYSKC ++ A VF+ + K+ + WN MI +A NG+ +K ++
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKNDVFWNAMIRGYAHNGESHKVME 414
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLG 355
L M G + D ++ + L C + +E G + ++ + N+ ++VD+
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+ G +++A M D V W +++G+
Sbjct: 475 KCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 5/215 (2%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
A +S+A + F ++ T WN++L + +P + + + S+ + + T S L
Sbjct: 109 AQVSYAEKQFDFLEKDVTA-WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVL 167
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
CAR QIH +++ G + YAK + A++VF+ + +
Sbjct: 168 STCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTV 227
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
W + SG + P EA+ +F+RM++EG RP+ + + ++ +LG LK ++ G
Sbjct: 228 CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFG-- 285
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
E +V+ N +I + K G A F NM
Sbjct: 286 --EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM 318
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 133/312 (42%), Gaps = 24/312 (7%)
Query: 63 FRRIQNPSTN--DWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR-- 118
FR + PS+ D + +R L+ SP + I Y V S ++ L C
Sbjct: 3 FRVLLTPSSAMFDSFSFVRRLSYSPDLGRRI--YGHVLPSHDQIHQRLLEICLGQCKLFK 60
Query: 119 ------------ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE 166
AL +HS+ L G D+ YAK + A+K FD
Sbjct: 61 SRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF 120
Query: 167 MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG 226
+ K D+ +WN+M+S + +P + + F + E PN T LS C++ ++ G
Sbjct: 121 LEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFG 179
Query: 227 EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAM 286
+H ++ L+ N A++DMY+KC + A VF+ + + + W + +
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVK 238
Query: 287 NGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH 346
G +A+ + ++M +G PD ++++ + G +++ LF G + P++
Sbjct: 239 AGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF----GEMSSPDVVA 294
Query: 347 YGSVVDLLGRAG 358
+ ++ G+ G
Sbjct: 295 WNVMISGHGKRG 306
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 4/221 (1%)
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
AL+ G+ VH + +D + NA++D+Y+KC V A F + K + WN+M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE--KDVTAWNSML 132
Query: 282 MAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVK 341
++ G K L + + + P+ ++ L C VE G ++ M ++
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRK 401
N G++VD+ + RI +A + + P+ V W L G E A + +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 402 LVEMGSNSCG-DFVLLSNVYAARQRWHDVKRVREAMITKDV 441
+ + G FV + N Y + D + + M + DV
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDV 292
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 210/397 (52%), Gaps = 8/397 (2%)
Query: 62 IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT 121
+F R++ W ++ G A+ R + + +A+T + + C AL
Sbjct: 275 VFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALK 334
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISG 181
++ +H +R + YAK +D +VF K W+A+I+G
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAG 394
Query: 182 LAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMN 241
Q ++A+ LFKRM+ E PN T+ L A + L L+Q +H Y+ +
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS 454
Query: 242 VIVCNAVIDMYSKCGFVDKAYSVF---QNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
+ ++ +YSKCG ++ A+ +F Q +K ++ W +I + M+GDG+ AL +
Sbjct: 455 LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFM 514
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM---KGSVVKPNMKHYGSVVDLLG 355
+M GV P+ +++ +AL AC+H+GLVEEG+ LF M ++ + N HY +VDLLG
Sbjct: 515 EMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSN--HYTCIVDLLG 572
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVL 415
RAGR+ EAY+ I ++P P +W +LL A T+ NV++ EMA+ KL E+ + G++VL
Sbjct: 573 RAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVL 632
Query: 416 LSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEI 452
L+N+YAA RW D+++VR M +RK PG S EI
Sbjct: 633 LANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 148/316 (46%), Gaps = 10/316 (3%)
Query: 17 HSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPA--ADLSFAAQIFRRIQNPSTNDW 74
S+ K L H+IT G+ H +L +++ A +++A ++F + S +
Sbjct: 29 QSISKTKALHCHVITGGRVSGH-----ILSTLSVTYALCGHITYARKLFEEMPQSSLLSY 83
Query: 75 NAVLRGLAMSPQPTQAISWY-RSVSRSPQKV-DALTCSFALKGCARALTFSEATQIHSQV 132
N V+R AIS + R VS + V D T F K + +H ++
Sbjct: 84 NIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI 143
Query: 133 LRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAI 192
LR F Y G ++ A+ VFD M RD+ SWN MISG + N+A+
Sbjct: 144 LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDAL 203
Query: 193 ALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMY 252
+F M E + T++ L C L L+ G VH + +++L + V NA+++MY
Sbjct: 204 MMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
KCG +D+A VF M + +ITW MI + +GD AL+L M +GV P+AV+
Sbjct: 264 LKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI 322
Query: 313 LAALCACNHAGLVEEG 328
+ + C A V +G
Sbjct: 323 ASLVSVCGDALKVNDG 338
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 147/354 (41%), Gaps = 4/354 (1%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
+ A +F ++N WN ++ G + A+ + + +D T L
Sbjct: 168 VEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPV 227
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
C +H V Y K G +D A+ VFD M +RD+ +W
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITW 287
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
MI+G + A+ L + M+ EG RPN VT+ +S C + G+ +HG+ V
Sbjct: 288 TCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
+++ ++I+ ++I MY+KC VD + VF S + W+ +I N AL
Sbjct: 348 QQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT-GPWSAIIAGCVQNELVSDALG 406
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLG 355
L +M + V P+ + + L A + + + + + + ++ +V +
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYS 466
Query: 356 RAGRIKEAYDTINSMP---MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ G ++ A+ N + DVVLW +L+ +G+ A ++V G
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG 520
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/433 (34%), Positives = 229/433 (52%), Gaps = 35/433 (8%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S A + A ++F +I W ++ G Q +A+ +Y + R K +
Sbjct: 250 SKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMV 309
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYA------------------ 152
L AR++ S+ Q+H +++ GFD YA
Sbjct: 310 DLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKD 369
Query: 153 -------------KTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM- 198
K G ++ A++VFD+ +DI SWNAMISG AQ P A+ LF+ M
Sbjct: 370 HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 199 KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFV 258
+P+ +T++ SA S LG+L++G+ H Y+ + N + A+IDMY+KCG +
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSI 489
Query: 259 DKAYSVF-QNMSCTKSLIT-WNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
+ A ++F Q + + S I+ WN +I A +G ALDL + + P++++++ L
Sbjct: 490 ETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVL 549
Query: 317 CACNHAGLVEEGVRLFDLMKGS-VVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPD 375
AC HAGLVE G F+ MK ++P++KHYG +VDLLG+AGR++EA + I MP+ D
Sbjct: 550 SACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKAD 609
Query: 376 VVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREA 435
V++W LL AS+T+GNVE+AE+A+ +L + + G V+LSNVYA RW DV VRE
Sbjct: 610 VMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREE 669
Query: 436 MITKDVRKVPGFS 448
M T+DV FS
Sbjct: 670 MRTRDVEWSRAFS 682
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 35/279 (12%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y+K G ++ A+++FD++ ++DI SW MI G + ++ +EA+ + M G +P++V +
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDM------------------------------ 240
+ LSA ++ +G +HG IV D
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 241 -NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
++ NA+I + K G V++A VF + + K + +WN MI +A + AL L +
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVF-DQTHDKDIFSWNAMISGYAQSLSPQLALHLFRE 427
Query: 300 M-ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
M + V PDA++ ++ A + G +EEG R D + S + PN +++D+ + G
Sbjct: 428 MISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCG 487
Query: 359 RIKEAYDTINSMPMLPDVVL--WQSLLGASKTYGNVEMA 395
I+ A + + + + W +++ S T+G+ ++A
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLA 526
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 123/279 (44%), Gaps = 39/279 (13%)
Query: 112 ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKT-------------GDLD 158
AL CA + + QIH +VL+ G D+ YAK LD
Sbjct: 47 ALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLD 106
Query: 159 AAQ------------------KVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE 200
+A K+FD MP+R S+ +I G AQ ++ +EA+ LF+ M+
Sbjct: 107 SASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRN 166
Query: 201 EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
G N+VT+ +SACS LG + ++ + KL+ V V ++ MY C +
Sbjct: 167 LGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKD 226
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN 320
A +F M ++L+TWN M+ ++ G +A +L DQ+ D VS+ + C
Sbjct: 227 ARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDGCL 281
Query: 321 HAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGR 359
++E + + M +KP+ +VDLL + R
Sbjct: 282 RKNQLDEALVYYTEMLRCGMKPSEVM---MVDLLSASAR 317
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 43/241 (17%)
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
++ AL +C+ + G +H ++ LD N +CN+V++MY+KC + A SVF++ +
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 270 ------------------------------CTKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
+S +++ T+I +A N +A++L +
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 300 MALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDL-----MKGSV-VKPNMKHYGSVVDL 353
M G+ + V+ + AC+H G + + L L ++G V V N+ H +
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDF 413
L K+A + MP ++V W +L G +E AE ++ E S G
Sbjct: 224 L------KDARKLFDEMPE-RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTM 276
Query: 414 V 414
+
Sbjct: 277 I 277
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 237/475 (49%), Gaps = 45/475 (9%)
Query: 49 AISPAADLSFAAQIFRRIQ----NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKV 104
S D A +IF +Q P W +VL + + + ++ + S V
Sbjct: 233 GFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAV 292
Query: 105 DALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVF 164
+ CA S A ++H V++ GF+ Y K G + A+ +F
Sbjct: 293 SGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLF 352
Query: 165 DEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE------------------------ 200
++ + I SWN++I+ + +EA++LF ++E
Sbjct: 353 RQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQ 412
Query: 201 -------EGWR--------PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVC 245
E +R N VT+ LS C++L AL G +HG+++ + N++V
Sbjct: 413 GRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQ 472
Query: 246 NAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGV 305
NA+++MY+KCG + + VF+ + K LI+WN++I + M+G KAL + D+M G
Sbjct: 473 NALVNMYAKCGLLSEGSLVFEAIR-DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGF 531
Query: 306 HPDAVSYLAALCACNHAGLVEEGVRLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAY 364
HPD ++ +A L AC+HAGLVE+G +F + K ++P +HY +VDLLGR G +KEA
Sbjct: 532 HPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEAS 591
Query: 365 DTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQ 424
+ + +MPM P V + +LL + + + NV++AE + +L + G ++LLSN+Y+A
Sbjct: 592 EIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGG 651
Query: 425 RWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEI 479
RW + VR KD++KV G S+ E+ K +KF +G ++ IY ++++
Sbjct: 652 RWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDL 706
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 127/309 (41%), Gaps = 40/309 (12%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
WN++L+ A+ YR + + D L+ C F H+QV+
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ G Y K G + A +F EMP R+ SWN MI G +Q A+
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 194 LFKRMKEEGWRPNDVTVLGAL-----------------------------------SACS 218
+F+ M+ E ++P++VT L S C+
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 219 QLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWN 278
+L AL E VHGY++ + + NA+I +Y K G V A +F+ + K + +WN
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR-NKGIESWN 364
Query: 279 TMIMAFAMNGDGYKALDLLDQMA----LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDL 334
++I +F G +AL L ++ + V + V++ + + CN G ++ + F
Sbjct: 365 SLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 335 MKGSVVKPN 343
M+ S V N
Sbjct: 425 MQFSKVLAN 433
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 15/266 (5%)
Query: 17 HSLIHIKQLQAHLITTGKFHFHPSRTKLLE-----LCAISPAADLSFAAQIFRRIQ---- 67
++LIH+ Q + + F R K +E + + A L A +F ++
Sbjct: 333 NALIHVYGKQGK-VKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNH 391
Query: 68 --NPSTN--DWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFS 123
N N W +V++G + + ++ ++R + S +++T L CA +
Sbjct: 392 VCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALN 451
Query: 124 EATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLA 183
+IH V+R YAK G L VF+ + +D+ SWN++I G
Sbjct: 452 LGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYG 511
Query: 184 QGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-EIVHGYIVDEKLDMNV 242
+A+++F RM G+ P+ + ++ LSACS G +++G EI + L+
Sbjct: 512 MHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQ 571
Query: 243 IVCNAVIDMYSKCGFVDKAYSVFQNM 268
++D+ + GF+ +A + +NM
Sbjct: 572 EHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 120 LTFSEATQIHSQVLRFGFDAXX-XXXXXXXXXYAKTGDLDAAQKVFDEMPK---RDIASW 175
LT + Q+H+QVL F YA+ G L A+ VF+ + D+ W
Sbjct: 67 LTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLW 126
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
N+++ A+ L++ M++ G + + L AC LG H ++
Sbjct: 127 NSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ 186
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
L N+ V N ++ +Y K G + AY++F M ++ ++WN MI F+ D A+
Sbjct: 187 IGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMP-VRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS 338
+ + M + PD V++ + L + G E+ ++ F LM+ S
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMS 288
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 213/418 (50%), Gaps = 5/418 (1%)
Query: 37 FHPSRTKLLE-LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYR 95
F P+ + L A + D+ +IF I PS + WNA+L G + +AIS +R
Sbjct: 346 FQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFR 405
Query: 96 SVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTG 155
+ K D T S L CAR QIH V+R Y++
Sbjct: 406 QMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECE 465
Query: 156 DLDAAQKVFDE-MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG-WRPNDVTVLGA 213
++ ++ +FD+ + + DIA WN+MISG +A+ LF+RM + PN+ +
Sbjct: 466 KMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATV 525
Query: 214 LSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKS 273
LS+CS+L +L G HG +V + V A+ DMY KCG +D A F + K+
Sbjct: 526 LSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKN 584
Query: 274 LITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFD 333
+ WN MI + NG G +A+ L +M G PD +++++ L AC+H+GLVE G+ +
Sbjct: 585 TVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILS 644
Query: 334 LMKG-SVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNV 392
M+ ++P + HY +VD LGRAGR+++A + P VLW+ LL + + +G+V
Sbjct: 645 SMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDV 704
Query: 393 EMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYT 450
+A + KL+ + S +VLLSN Y++ ++W D ++ M V K PG S+T
Sbjct: 705 SLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWT 762
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
Query: 153 KTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLG 212
K GDL A +VFD MP+RD+ SWN MIS L + +A+ ++KRM +G+ P+ T+
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 213 ALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGF-VDKAYSVFQNMSCT 271
LSACS++ G HG V LD N+ V NA++ MY+KCGF VD VF+++S
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS-Q 202
Query: 272 KSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAV 310
+ +++ +I A +A+ + M GV D+V
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 19/225 (8%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA------LTC 109
+ + ++F + P+ + AV+ GLA + +A+ +R + +VD+ L+
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Query: 110 SFALKGCARALTFSE------ATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKV 163
S +GC + SE QIH LR GF YAK D++ A+ +
Sbjct: 250 SAPREGCD---SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELI 306
Query: 164 FDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGAL 223
F EMP+ ++ SWN MI G Q R ++++ RM++ G++PN+VT + L AC + G +
Sbjct: 307 FAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDV 366
Query: 224 KQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
+ G + I +V NA++ YS ++A S F+ M
Sbjct: 367 ETGRRIFSSIPQP----SVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 146/327 (44%), Gaps = 15/327 (4%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
DL A ++F + WN ++ L +A+ Y+ + T + L
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL-DAAQKVFDEMPKRDI 172
C++ L + H ++ G D YAK G + D +VF+ + + +
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNE 205
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALS------ACSQLGALKQG 226
S+ A+I GLA+ ++ EA+ +F+ M E+G + + V + LS C L +
Sbjct: 206 VSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGN 265
Query: 227 EI---VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
E+ +H + ++ + N+++++Y+K ++ A +F M ++++WN MI+
Sbjct: 266 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP-EVNVVSWNIMIVG 324
Query: 284 FAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPN 343
F K+++ L +M G P+ V+ ++ L AC +G VE G R+F S+ +P+
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFS----SIPQPS 380
Query: 344 MKHYGSVVDLLGRAGRIKEAYDTINSM 370
+ + +++ +EA M
Sbjct: 381 VSAWNAMLSGYSNYEHYEEAISNFRQM 407
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 78/211 (36%), Gaps = 70/211 (33%)
Query: 226 GEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC--------------- 270
G+++HG+IV + + +CN ++D+Y +CG D A VF MS
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 271 ---------------TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAA 315
+ +++WN MI G KAL + +M DG P + +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 316 LCACN----------------HAGL--------------------VEEGVRLFDLMKGSV 339
L AC+ GL V+ GVR+F+ S+
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE----SL 200
Query: 340 VKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
+PN Y +V+ L R ++ EA M
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLM 231
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 232/467 (49%), Gaps = 38/467 (8%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
D S A F + WNA+L A SP+ Q ++ + +D++T L
Sbjct: 380 GDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLL 439
Query: 114 KGCARALTFSEATQIHSQVLRFGF---DAXXXXXXXXXXXYAKTGDL------------- 157
K C + ++H ++ G + YAK G++
Sbjct: 440 KFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSER 499
Query: 158 -------------------DAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM 198
D AQ +F EM D+ +W+ M+ A+ PNEAI +F+ +
Sbjct: 500 RTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREI 559
Query: 199 KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFV 258
+ G RPN VT++ L C+QL +L HGYI+ L ++ + ++D+Y+KCG +
Sbjct: 560 QARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSL 618
Query: 259 DKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCA 318
AYSVFQ+ + L+ + M+ +A++G G +AL + M + PD V L A
Sbjct: 619 KHAYSVFQS-DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTA 677
Query: 319 CNHAGLVEEGVRLFDLMKG-SVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVV 377
C HAGL+++G++++D ++ +KP M+ Y VDL+ R GR+ +AY + MP+ P+
Sbjct: 678 CCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNAN 737
Query: 378 LWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMI 437
+W +LL A TY +++ + L++ S+ G+ VL+SN+YAA +W V +R M
Sbjct: 738 IWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMK 797
Query: 438 TKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIK 484
K+++K G S+ E+D + + F++GD SHP I+ ++ + ++K
Sbjct: 798 KKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 161/333 (48%), Gaps = 11/333 (3%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQ-KVDALTCSFALKGCARA 119
++FR++ + WN VL GL++S + + +++++ + + K ++T + L C R
Sbjct: 77 KMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRL 135
Query: 120 LTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL-DAAQKVFDEMPKRDIASWNAM 178
+HS +++ G + YAK G + A FD + +D+ SWNA+
Sbjct: 136 GDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAI 195
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG---ALKQGEIVHGYIVD 235
I+G ++ + +A F M +E PN T+ L C+ + A + G +H Y+V
Sbjct: 196 IAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQ 255
Query: 236 EK-LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
L +V VCN+++ Y + G +++A S+F M +K L++WN +I +A N + +KA
Sbjct: 256 RSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG-SKDLVSWNVVIAGYASNCEWFKAF 314
Query: 295 DLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFD-LMKGSVVKPNMKHYGSVVD 352
L + G V PD+V+ ++ L C + G + +++ S + + +++
Sbjct: 315 QLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALIS 374
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
R G AY + M D++ W ++L A
Sbjct: 375 FYARFGDTSAAYWAFSLMST-KDIISWNAILDA 406
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 167/376 (44%), Gaps = 21/376 (5%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCA- 117
A F I + WNA++ G + + A + + + P + + T + L CA
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 118 --RALTFSEATQIHSQVL-RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
+ + QIHS V+ R Y + G ++ A +F M +D+ S
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEG-WRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
WN +I+G A +A LF + +G P+ VT++ L C+QL L G+ +H YI
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 234 VDEK-LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
+ L + V NA+I Y++ G AY F MS TK +I+WN ++ AFA + ++
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS-TKDIISWNAILDAFADSPKQFQ 415
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH------ 346
L+LL + + + D+V+ L+ L C + +G+ + G VK + H
Sbjct: 416 FLNLLHHLLNEAITLDSVTILSLLKFCINV----QGIGKVKEVHGYSVKAGLLHDEEEPK 471
Query: 347 -YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
+++D + G ++ A+ + +V + SLL G+ + A+M EM
Sbjct: 472 LGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQML---FTEM 528
Query: 406 GSNSCGDFVLLSNVYA 421
+ + L+ +YA
Sbjct: 529 STTDLTTWSLMVRIYA 544
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 9/279 (3%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
+K CA + +H V + G A YAK +D QK+F +M D
Sbjct: 28 VKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDP 87
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMK-EEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
WN +++GL+ S E + FK M + +P+ VT L C +LG G+ +H
Sbjct: 88 VVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHS 146
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFV-DKAYSVFQNMSCTKSLITWNTMIMAFAMN--- 287
YI+ L+ + +V NA++ MY+K GF+ AY+ F ++ K +++WN +I F+ N
Sbjct: 147 YIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIA-DKDVVSWNAIIAGFSENNMM 205
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFD-LMKGSVVKPNMKH 346
D +++ L+ + + + + L + + G ++ +++ S ++ ++
Sbjct: 206 ADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFV 265
Query: 347 YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
S+V R GRI+EA M D+V W ++
Sbjct: 266 CNSLVSFYLRVGRIEEAASLFTRMGS-KDLVSWNVVIAG 303
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 228/442 (51%), Gaps = 2/442 (0%)
Query: 62 IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT 121
+F + + + AV+ GL + + + + R +++T AL C+ +
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISG 181
E QIH+ + ++G ++ Y+K G ++ A +F+ + D S ++ G
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 182 LAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMN 241
LAQ EAI F RM + G + V L +L G+ +H ++ K N
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN 391
Query: 242 VIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
V N +I+MYSKCG + + +VF+ M ++ ++WN+MI AFA +G G AL L ++M
Sbjct: 392 TFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKG-SVVKPNMKHYGSVVDLLGRAGRI 360
V P V++L+ L AC+H GL+++G L + MK ++P +HY ++D+LGRAG +
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 361 KEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVY 420
KEA I+S+P+ PD +WQ+LLGA +G+ E+ E A+ +L + +S +L++N+Y
Sbjct: 511 KEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIY 570
Query: 421 AARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIK 480
++R +W + + + M V K G S EI+ K H F+ D+ HP + IY + +
Sbjct: 571 SSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLF 630
Query: 481 FRIKAYGYTAKTDLVLHDIGEE 502
+ GY +L G++
Sbjct: 631 PVMVDEGYRPDKRFILCYTGDD 652
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 12/280 (4%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
IH+ + G+D Y K G + + VFD M R++ + A+ISGL +
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNA 247
+ + LF M+ PN VT L AL+ACS + +G+ +H + ++ + + +A
Sbjct: 237 HEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESA 296
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
++DMYSKCG ++ A+++F++ + ++ +++ A NG +A+ +M GV
Sbjct: 297 LMDMYSKCGSIEDAWTIFESTTEVDE-VSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEI 355
Query: 308 DAVSYLAALCAC---NHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAY 364
DA A L N GL G +L L+ N ++++ + G + ++
Sbjct: 356 DANVVSAVLGVSFIDNSLGL---GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 365 DTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE 404
MP + V W S++ A +G+ +A+ KL E
Sbjct: 413 TVFRRMPK-RNYVSWNSMIAAFARHGH----GLAALKLYE 447
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 5/261 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
YAK G L A K+FDEMP RD+ S N + G + L KRM G + T+
Sbjct: 100 YAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-DHATL 158
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
LS C +++H + D + V N +I Y KCG VF MS
Sbjct: 159 TIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMS- 217
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+++IT +I N L L M VHP++V+YL+AL AC+ + + EG +
Sbjct: 218 HRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQ 277
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ L+ ++ + +++D+ + G I++A+ S + +V + L+G ++
Sbjct: 278 IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGS 337
Query: 391 NVEMAEMASRKL---VEMGSN 408
E + R L VE+ +N
Sbjct: 338 EEEAIQFFIRMLQAGVEIDAN 358
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 140/449 (31%), Positives = 228/449 (50%), Gaps = 8/449 (1%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLEL-CAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGL 81
K + A +I + P LL++ C+ D+ A +F RI NP+ WN+++ G
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCS---CGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 82 AMSPQPTQAISWYRSVSR-SPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAX 140
+ + QA+ YR + R S + D T S A+ A F +H QV + G++
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERS 436
Query: 141 XXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE 200
Y K + ++AQKVFD M +RD+ W MI G ++ A+ F M
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR 496
Query: 201 EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
E R + ++ + ACS + L+QGE+ H + D + VC A++DMY K G +
Sbjct: 497 EKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYET 556
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN 320
A ++F +++ L WN+M+ A++ +G KAL +Q+ +G PDAV+YL+ L AC+
Sbjct: 557 AETIF-SLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACS 615
Query: 321 HAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTI-NSMPMLPDVVLW 379
H G +G L++ MK +K KHY +V+L+ +AG + EA + I S P LW
Sbjct: 616 HRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELW 675
Query: 380 QSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITK 439
++LL A N+++ A+ +++++ +LLSN+YA RW DV +R +
Sbjct: 676 RTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGL 735
Query: 440 DVRKVPGFSYTEI-DCKIHKFINGDQSHP 467
K PG S+ E+ + F +GDQS+P
Sbjct: 736 ASSKDPGLSWIEVNNNNTQVFSSGDQSNP 764
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 3/357 (0%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S DL A +IF + N WN ++ G + + + ++R++ S T S
Sbjct: 245 SSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYS 304
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
L GC++ ++S IH++++ A Y GD+ A VF +
Sbjct: 305 IVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP 364
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKR-MKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
++ SWN++ISG ++ +A+ +++R ++ RP++ T A+SA ++ G+++
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Query: 230 HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
HG + + +V V ++ MY K + A VF M + ++ W MI+ + G+
Sbjct: 425 HGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK-ERDVVLWTEMIVGHSRLGN 483
Query: 290 GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGS 349
A+ +M + D S + + AC+ ++ +G L + M G+
Sbjct: 484 SELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGA 543
Query: 350 VVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+VD+ G+ G+ + A +TI S+ PD+ W S+LGA +G VE A +++E G
Sbjct: 544 LVDMYGKNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENG 599
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 161/347 (46%), Gaps = 10/347 (2%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQ-PTQAISWYRSVSRSPQKVDALTCSFA 112
L A ++F ++ + + +NA+ + +P + A ++ K ++ T +
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
++ CA + ++SQ+++ G+ Y+ GDL++A+++FD + RD
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDA 265
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
+WN MI G + + + + F+ M G P T L+ CS+LG+ G+++H
Sbjct: 266 VAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHAR 325
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
I+ ++ + NA++DMY CG + +A+ VF + +L++WN++I + NG G +
Sbjct: 326 IIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGCSENGFGEQ 384
Query: 293 ALDLLDQMA-LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH---YG 348
A+ + ++ + PD ++ AA+ A G L+ G V K + G
Sbjct: 385 AMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHG----KLLHGQVTKLGYERSVFVG 440
Query: 349 SVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ + + R E+ + + DVVLW ++ GN E+A
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELA 487
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 6/298 (2%)
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXX---XXXXXXXYAKTGDLDAAQKVFDEMPKR 170
+ C A QIH+ VL G A Y + G L+ A+KVFD+MP R
Sbjct: 102 RKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHR 161
Query: 171 DIASWNAMISGLAQGSR-PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
++ S+NA+ S ++ + A L M E +PN T + C+ L + G +
Sbjct: 162 NVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSL 221
Query: 230 HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
+ I+ NV+V +V+ MYS CG ++ A +F ++ + + WNTMI+ N
Sbjct: 222 NSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN-NRDAVAWNTMIVGSLKNDK 280
Query: 290 GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGS 349
L M + GV P +Y L C+ G G + + S ++ +
Sbjct: 281 IEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA 340
Query: 350 VVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS 407
++D+ G ++EA+ + P++V W S++ G E A + R+L+ M +
Sbjct: 341 LLDMYCSCGDMREAFYVFGRIHN-PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMST 397
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 125/273 (45%), Gaps = 26/273 (9%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIAS---WNAMISGLAQGSRPNEAIALFKRMKEEGWRP-N 206
Y + L+ A+KVFD+MP+R+I + +A+ ++ GS + I + + P N
Sbjct: 32 YVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPLN 91
Query: 207 DV--TVLGALSACSQLGALKQGEIVHGYIVDE---KLDMNVIVCNAVIDMYSKCGFVDKA 261
++ +V+ C + LK+ +H ++ + N +I MY +CG +++A
Sbjct: 92 EIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQA 151
Query: 262 YSVFQNMSCTKSLITWNTMIMAFAMNGD-GYKALDLLDQMALDGVHPDAVSYLAALCACN 320
VF M ++++++N + A++ N D A L MA + V P++ ++ + + C
Sbjct: 152 RKVFDKMP-HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVC- 209
Query: 321 HAGLVEEGVRLFDLMKGSVVK----PNMKHYGSVVDLLGRAGRIKEA---YDTINSMPML 373
V E V + + ++K N+ SV+ + G ++ A +D +N+
Sbjct: 210 ---AVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR--- 263
Query: 374 PDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
D V W +++ S +E M R ++ G
Sbjct: 264 -DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSG 295
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 192/312 (61%), Gaps = 3/312 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM-KEEGWRPNDVT 209
YAK G + A+ +FD+MP RD+ ++N+M++G Q EA+ +F M KE P+D T
Sbjct: 293 YAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTT 352
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
++ L A +QLG L + +H YIV+++ + + A+IDMYSKCG + A VF+ +
Sbjct: 353 LVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE 412
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
KS+ WN MI A++G G A D+L Q+ + PD ++++ L AC+H+GLV+EG+
Sbjct: 413 -NKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGL 471
Query: 330 RLFDLMK-GSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKT 388
F+LM+ ++P ++HYG +VD+L R+G I+ A + I MP+ P+ V+W++ L A
Sbjct: 472 LCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSH 531
Query: 389 YGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
+ E E+ ++ L+ + +VLLSN+YA+ W DV+RVR M + + K+PG S
Sbjct: 532 HKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCS 591
Query: 449 YTEIDCKIHKFI 460
+ E+D ++H+F
Sbjct: 592 WIELDGRVHEFF 603
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 13/304 (4%)
Query: 63 FRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTF 122
F +++P WNAV++ + P QA+ + + VD + S LK C+R
Sbjct: 80 FGEVEDPFL--WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 123 SEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGL 182
QIH + + G + Y K G L ++++FD MPKRD S+N+MI G
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 183 AQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNV 242
+ A LF M E N ++ +S +Q G + + + + ++
Sbjct: 198 VKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQ---TSDGVDIASKLFADMPEKDL 252
Query: 243 IVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMAL 302
I N++ID Y K G ++ A +F M + ++TW TMI +A G + A L DQM
Sbjct: 253 ISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMIDGYAKLGFVHHAKTLFDQMP- 310
Query: 303 DGVHPDAVSYLAALCACNHAGLVEEGVRLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
H D V+Y + + E + +F D+ K S + P+ V+ + + GR+
Sbjct: 311 ---HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLS 367
Query: 362 EAYD 365
+A D
Sbjct: 368 KAID 371
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 5/256 (1%)
Query: 33 GKFHFHPSRTKLLELCAISPAADLSF---AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQ 89
G F P R + I A L F A +F ++ + +N+++ G + +
Sbjct: 273 GLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHME 332
Query: 90 AISWYRSVSRSPQKV-DALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXX 148
A+ + + + + D T L A+ S+A +H ++ F
Sbjct: 333 ALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALI 392
Query: 149 XXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDV 208
Y+K G + A VF+ + + I WNAMI GLA A + +++ +P+D+
Sbjct: 393 DMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDI 452
Query: 209 TVLGALSACSQLGALKQGEIVHGYI-VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQN 267
T +G L+ACS G +K+G + + K++ + ++D+ S+ G ++ A ++ +
Sbjct: 453 TFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEE 512
Query: 268 MSCTKSLITWNTMIMA 283
M + + W T + A
Sbjct: 513 MPVEPNDVIWRTFLTA 528
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 134/307 (43%), Gaps = 23/307 (7%)
Query: 121 TFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGD---LDAAQKVFDEM--------PK 169
T + QIH ++++ G +A + D A+ VF E
Sbjct: 24 TSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEV 83
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
D WNA+I + G P +A+ L M E G + ++ L ACS+LG +K G +
Sbjct: 84 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 230 HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
HG++ L ++ + N +I +Y KCG + + +F M S +++N+MI + G
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDS-VSYNSMIDGYVKCGL 202
Query: 290 GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGS 349
A +L D M ++ + +S+ + + +GV + + + + ++ + S
Sbjct: 203 IVSARELFDLMPME--MKNLISWNSMISGYAQT---SDGVDIASKLFADMPEKDLISWNS 257
Query: 350 VVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA-----EMASRKLVE 404
++D + GRI++A + MP DVV W +++ G V A +M R +V
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMPR-RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVA 316
Query: 405 MGSNSCG 411
S G
Sbjct: 317 YNSMMAG 323
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/411 (31%), Positives = 216/411 (52%), Gaps = 6/411 (1%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
+ +A ++F I T WN+++ G + + A+ +R + + D T L
Sbjct: 181 GQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSML 240
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
C+ + + Y K GDLD+A++VF++M K+D
Sbjct: 241 GACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRV 300
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
+W AMI+ +Q + +EA LF M++ G P+ T+ LSAC +GAL+ G+ + +
Sbjct: 301 AWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHA 360
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ L N+ V ++DMY KCG V++A VF+ M K+ TWN MI A+A G +A
Sbjct: 361 SELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP-VKNEATWNAMITAYAHQGHAKEA 419
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVD 352
L L D+M+ V P ++++ L AC HAGLV +G R F M + P ++HY +++D
Sbjct: 420 LLLFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIID 476
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG-SNSCG 411
LL RAG + EA++ + P PD ++ ++LGA +V + E A R L+EM + + G
Sbjct: 477 LLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAG 536
Query: 412 DFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFING 462
++V+ SNV A + W + ++R M + V K PG S+ EI+ ++ +F+ G
Sbjct: 537 NYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 191/382 (50%), Gaps = 9/382 (2%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
+C S+ ++Q+QA ++ H + D ++++ +F + P+ +
Sbjct: 46 KCISVNQLRQIQAQML------LHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSF 99
Query: 75 NAVLRGLAMSPQPTQA-ISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
N ++RGL + +A +S YR + S K D T +F CA+ +HS +
Sbjct: 100 NYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF 159
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ G + YAK G + A+K+FDE+ +RD SWN+MISG ++ +A+
Sbjct: 160 KVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMD 219
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
LF++M+EEG+ P++ T++ L ACS LG L+ G ++ + +K+ ++ + + +I MY
Sbjct: 220 LFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYG 279
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYL 313
KCG +D A VF M K + W MI ++ NG +A L +M GV PDA +
Sbjct: 280 KCGDLDSARRVFNQM-IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLS 338
Query: 314 AALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPML 373
L AC G +E G ++ ++ N+ +VD+ G+ GR++EA +MP +
Sbjct: 339 TVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP-V 397
Query: 374 PDVVLWQSLLGASKTYGNVEMA 395
+ W +++ A G+ + A
Sbjct: 398 KNEATWNAMITAYAHQGHAKEA 419
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 227/443 (51%), Gaps = 11/443 (2%)
Query: 59 AAQIFRRIQNPSTND---WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
A ++F + P +D WNA++ G + + A+ + + V T + L
Sbjct: 214 AQKVFDEL--PDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSA 271
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
+ IH ++ G + Y K+ L+ A +F+ M +RD+ +W
Sbjct: 272 FTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTW 331
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
N+++ + +ALF+RM G RP+ VT+ L C +L +L+QG +HGY++
Sbjct: 332 NSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIV 391
Query: 236 EKL----DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGY 291
L N + N+++DMY KCG + A VF +M K +WN MI + + G
Sbjct: 392 SGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR-VKDSASWNIMINGYGVQSCGE 450
Query: 292 KALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSV 350
ALD+ M GV PD ++++ L AC+H+G + EG M+ + P HY V
Sbjct: 451 LALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACV 510
Query: 351 VDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSC 410
+D+LGRA +++EAY+ S P+ + V+W+S+L + + +GN ++A +A ++L E+ C
Sbjct: 511 IDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHC 570
Query: 411 GDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWK 470
G +VL+SNVY ++ +V VR+AM ++V+K PG S+ + +H F G+Q+HP +K
Sbjct: 571 GGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFK 630
Query: 471 EIYAKMDEIKFRIKAYGYTAKTD 493
I+ + + + + Y D
Sbjct: 631 SIHDWLSLVISHMHGHEYMTVDD 653
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 163/330 (49%), Gaps = 11/330 (3%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+NA++ G ++ P A+ YR + + D T LKG + A+ S+ ++H
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAF 187
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS-WNAMISGLAQGSRPNEAI 192
+ GFD+ Y+K ++ AQKVFDE+P RD + WNA+++G +Q R +A+
Sbjct: 188 KLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDAL 247
Query: 193 ALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMY 252
+F +M+EEG + T+ LSA + G + G +HG V +++V NA+IDMY
Sbjct: 248 LVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMY 307
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
K ++++A S+F+ M + L TWN+++ GD L L ++M G+ PD V+
Sbjct: 308 GKSKWLEEANSIFEAMD-ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTL 366
Query: 313 LAALCACNHAGLVEEGVRLFDLMKGSVV----KPNMKHYGSVVDLLGRAGRIKEAYDTIN 368
L C + +G + M S + N + S++D+ + G +++A +
Sbjct: 367 TTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFD 426
Query: 369 SMPMLPDVVLWQSLLGASKTYGNVEMAEMA 398
SM + D W ++ YG E+A
Sbjct: 427 SM-RVKDSASWNIMING---YGVQSCGELA 452
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 162/385 (42%), Gaps = 24/385 (6%)
Query: 65 RIQNPSTNDWNAVLRGLAMSP------QPTQAI-SWYRSVS----RSPQKVD---ALTCS 110
IQN S +LR L +P +P+ A+ S Y +VS +P++ + TC
Sbjct: 9 EIQNCSA----GILRFLPRNPDLFAAIKPSSALASLYSTVSGQIEENPKRYEHHNVATCI 64
Query: 111 FALKGCARALTFSEATQIHSQVLRFGF-DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
L+ CA+ + QIH ++R GF D YAK G + A VF +
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
RD+ +NA+ISG P +A+ ++ M+ G P+ T L + L + V
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKV 182
Query: 230 HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
HG D + V + ++ YSK V+ A VF + + WN ++ ++
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 290 GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGS 349
AL + +M +GV + + L A +G ++ G + L + ++ +
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 350 VVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNS 409
++D+ G++ ++EA +M D+ W S+L G+ + +++ G
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDE-RDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRP 361
Query: 410 CGDFVLLSNVYAARQRWHDVKRVRE 434
D V L+ V R +++ RE
Sbjct: 362 --DIVTLTTVLPTCGRLASLRQGRE 384
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 182/295 (61%), Gaps = 3/295 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW-RPNDVT 209
YA G + A++VFD MP RD+ SWNAM++ A NE + +F +M ++ +P+ T
Sbjct: 247 YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFT 306
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
++ LSAC+ LG+L QGE VH YI +++ + A++DMYSKCG +DKA VF+ S
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS 366
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
+ + TWN++I +++G G AL++ +M +G P+ ++++ L ACNH G++++
Sbjct: 367 -KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQAR 425
Query: 330 RLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKT 388
+LF++M V+P ++HYG +VDLLGR G+I+EA + +N +P +L +SLLGA K
Sbjct: 426 KLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKR 485
Query: 389 YGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRK 443
+G +E AE + +L+E+ + +SN+YA+ RW V R M + V +
Sbjct: 486 FGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 165/378 (43%), Gaps = 43/378 (11%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAAD-LSFAAQIFRRIQNPSTND 73
R SL I+Q A ++ TG FH S +KL+ A +P +S+A I RI +P+
Sbjct: 48 RAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFT 107
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
N+V+R A S P A++ +R + P D + +F LK CA F E QIH +
Sbjct: 108 HNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI 167
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ G Y ++G + A+KV D MP RD SWN+++S + +EA A
Sbjct: 168 KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARA 227
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
LF M+E NV N +I Y+
Sbjct: 228 LFDEMEER---------------------------------------NVESWNFMISGYA 248
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVH-PDAVSY 312
G V +A VF +M + +++WN M+ A+A G + L++ ++M D PD +
Sbjct: 249 AAGLVKEAKEVFDSMP-VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTL 307
Query: 313 LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM 372
++ L AC G + +G + + ++ ++VD+ + G+I +A + +
Sbjct: 308 VSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSK 367
Query: 373 LPDVVLWQSLLGASKTYG 390
DV W S++ +G
Sbjct: 368 -RDVSTWNSIISDLSVHG 384
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 239/464 (51%), Gaps = 50/464 (10%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F + + WN++++ L + +A++ + R P++ D ++ + + G A+
Sbjct: 159 ALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLF---ERMPRR-DVVSWTAMVDGLAK 214
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXX----XXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
EA ++ FD YA+ +D A ++F MP+RD AS
Sbjct: 215 NGKVDEARRL--------FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS 266
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEG---W---------------------------- 203
WN MI+G + N+A LF RM E+ W
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGS 326
Query: 204 -RPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
+PN T + LSACS L L +G+ +H I N IV +A+++MYSK G + A
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 263 SVFQN-MSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
+F N + C + LI+WN+MI +A +G G +A+++ +QM G P AV+YL L AC+H
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSH 446
Query: 322 AGLVEEGVRLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQ 380
AGLVE+G+ F DL++ + +HY +VDL GRAGR+K+ + IN +
Sbjct: 447 AGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYG 506
Query: 381 SLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKD 440
++L A + V +A+ +K++E GS+ G +VL+SN+YAA + + +R M K
Sbjct: 507 AILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
Query: 441 VRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIK 484
++K PG S+ ++ + H F+ GD+SHP ++ + + + +++ +++
Sbjct: 567 LKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 137/275 (49%), Gaps = 44/275 (16%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
YA++G +D A ++FDEMP+R+I SWN+M+ L Q R +EA+ LF+RM DV
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR-----DVVS 204
Query: 211 LGALSACSQLGALKQGEIVHG-YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ--- 266
A+ G K G++ + D + N+I NA+I Y++ +D+A +FQ
Sbjct: 205 WTAMVD----GLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMP 260
Query: 267 --------------------NMSC-------TKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
N +C K++I+W TMI + N + +AL++ +
Sbjct: 261 ERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSK 320
Query: 300 MALDG-VHPDAVSYLAALCACNH-AGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRA 357
M DG V P+ +Y++ L AC+ AGLV EG ++ L+ SV + N +++++ ++
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLV-EGQQIHQLISKSVHQKNEIVTSALLNMYSKS 379
Query: 358 GRIKEAYDTI-NSMPMLPDVVLWQSLLGASKTYGN 391
G + A N + D++ W S++ +G+
Sbjct: 380 GELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 217/420 (51%), Gaps = 3/420 (0%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L A ++F+++ S WN++++G + + + T + L
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
C+R+ IH V+R +A Y K G+ + A+ VF + K SW
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
N MIS +A+ ++ +M G +P+ VT L ACSQL AL++G+ +H I +
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE 438
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
+L+ + ++ +A++DMYSKCG +A+ +F ++ K +++W MI A+ +G +AL
Sbjct: 439 SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALY 497
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLL 354
D+M G+ PD V+ LA L AC HAGL++EG++ F M+ ++P ++HY ++D+L
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 355 GRAGRIKEAYDTINSMPMLPD-VVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDF 413
GRAGR+ EAY+ I P D L +L A + + + +R LVE + +
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTY 617
Query: 414 VLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIY 473
++L N+YA+ + W +RVR M +RK PG S+ E+ K+ F D+SH + +Y
Sbjct: 618 MVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVY 677
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 169/331 (51%), Gaps = 2/331 (0%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARAL 120
Q+F + WN V+ S + +A+ + + S + ++++ + A+ C+R L
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 121 TFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMIS 180
+IH + ++ GF+ Y K L+ A++VF +MP++ + +WN+MI
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
G + + RM EG RP+ T+ L ACS+ L G+ +HGY++ ++
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
++ V ++ID+Y KCG + A +VF +WN MI ++ G+ +KA+++ DQM
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQ-KDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
GV PD V++ + L AC+ +E+G ++ + S ++ + +++D+ + G
Sbjct: 402 VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNE 461
Query: 361 KEAYDTINSMPMLPDVVLWQSLLGASKTYGN 391
KEA+ NS+P DVV W ++ A ++G
Sbjct: 462 KEAFRIFNSIPK-KDVVSWTVMISAYGSHGQ 491
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 190/400 (47%), Gaps = 53/400 (13%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
IH+ V++ G+ YAK + + +VFDEMP+RD+ASWN +IS Q
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNA 247
+A+ LF RM+ G+ PN V++ A+SACS+L L++G+ +H V + +++ V +A
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
++DMY KC ++ A VFQ M KSL+ WN+MI + GD +++L++M ++G P
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 308 DAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG--------- 358
+ + L AC+ + + G + + SVV ++ S++DL + G
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 359 -------------------------RIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVE 393
+ E YD + S+ + PDVV + S+L A +E
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 394 MAEMASRKLVEMGSNSCGDFVLLS---NVYAARQRWHDVKRVREAMITKDVRKVPGFSYT 450
+ + E S D +LLS ++Y+ + R+ ++ KDV S+T
Sbjct: 428 KGKQIHLSISE--SRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV-----VSWT 480
Query: 451 EIDCKIHKFINGDQSHPNWKEIYAKMDEI-KFRIKAYGYT 489
+ I+ SH +E + DE+ KF +K G T
Sbjct: 481 VM-------ISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 130/280 (46%), Gaps = 5/280 (1%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR-DIASWNAMISGLAQGS 186
+H ++L G Y D +A+ VF+ R D+ WN+++SG ++ S
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 187 RPNEAIALFKRMKE-EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVC 245
++ + +FKR+ P+ T + A LG G ++H +V +V+V
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 246 NAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGV 305
++++ MY+K + + VF M + + +WNT+I F +G+ KAL+L +M G
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVISCFYQSGEAEKALELFGRMESSGF 204
Query: 306 HPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYD 365
P++VS A+ AC+ +E G + + + ++VD+ G+ ++ A +
Sbjct: 205 EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 366 TINSMPMLPDVVLWQSLLGASKTYGNVE-MAEMASRKLVE 404
MP +V W S++ G+ + E+ +R ++E
Sbjct: 265 VFQKMPR-KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 113/261 (43%), Gaps = 17/261 (6%)
Query: 15 RCHSLIHIKQLQAHLITT---GKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPST 71
R +L+H K + ++I + + + S L C + + A +F + Q
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG-----EANLAETVFSKTQKDVA 375
Query: 72 NDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQ 131
WN ++ +A+ Y + K D +T + L C++ + QIH
Sbjct: 376 ESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS 435
Query: 132 VLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEA 191
+ + Y+K G+ A ++F+ +PK+D+ SW MIS +P EA
Sbjct: 436 ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREA 495
Query: 192 IALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-----EIVHGYIVDEKLDMNVIVCN 246
+ F M++ G +P+ VT+L LSAC G + +G ++ Y ++ ++ +
Sbjct: 496 LYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHY----S 551
Query: 247 AVIDMYSKCGFVDKAYSVFQN 267
+ID+ + G + +AY + Q
Sbjct: 552 CMIDILGRAGRLLEAYEIIQQ 572
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 214/376 (56%), Gaps = 12/376 (3%)
Query: 124 EATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLA 183
E +IH ++ GF + YAK L+ A+K F+++ R+I SWNAMISG A
Sbjct: 390 EGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFA 449
Query: 184 QGSRPNEAIALFKRMKEEGWRPNDVT---VLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
Q +EA+ +F E PN+ T VL A++ + ++KQG+ H +++ L+
Sbjct: 450 QNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNS 507
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
+V +A++DMY+K G +D++ VF MS K+ W ++I A++ +GD ++L +M
Sbjct: 508 CPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFETVMNLFHKM 566
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRAGR 359
+ V PD V++L+ L ACN G+V++G +F++M + ++P+ +HY +VD+LGRAGR
Sbjct: 567 IKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGR 626
Query: 360 IKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNV 419
+KEA + ++ +P P + QS+LG+ + +GNV+M + +EM G +V + N+
Sbjct: 627 LKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNI 686
Query: 420 YAARQRWHDVKRVREAMITKDVRKVPGFSY-----TEIDCKIHKFINGDQSHPNWKEIYA 474
YA ++ W +R+AM K+V K GFS+ TE + F +GD+SHP EIY
Sbjct: 687 YAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYR 746
Query: 475 KMDEIKFRIKAYGYTA 490
++ I + G A
Sbjct: 747 MVEIIGLEMNLEGKVA 762
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 161/325 (49%), Gaps = 15/325 (4%)
Query: 62 IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT 121
IF + +P WN +L G A+++ + + DA T S AL C +
Sbjct: 133 IFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISG 181
F Q+ S V++ G ++ Y+++G A++VFDEM +D+ SWN+++SG
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 182 LAQ-GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
L+Q G+ EA+ +F+ M EG + V+ ++ C LK +HG + +
Sbjct: 250 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 309
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
+ V N ++ YSKCG ++ SVF MS +++++W TMI + N D A+ + M
Sbjct: 310 LLEVGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTMI---SSNKD--DAVSIFLNM 363
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDL--MKGSVVKPNMKHYGSVVDLLGRAG 358
DGV+P+ V+++ + A ++EG+++ L G V +P++ + S + L +
Sbjct: 364 RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFE 421
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLL 383
+++A + +++ W +++
Sbjct: 422 ALEDAKKAFEDIT-FREIISWNAMI 445
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 23/311 (7%)
Query: 87 PTQAISWYRS---VSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXX 143
P +A+S ++ + + +D +T ALK C L QIH GF +
Sbjct: 56 PARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDL--KRGCQIHGFSTTSGFTSFVCV 113
Query: 144 XXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW 203
Y K G D A +F+ + D+ SWN ++SG A+ RMK G
Sbjct: 114 SNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGV 170
Query: 204 RPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYS 263
+ T ALS C G + +V L+ +++V N+ I MYS+ G A
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 264 VFQNMSCTKSLITWNTMIMAFAMNGD-GYKALDLLDQMALDGVHPDAVSYLAALCACNHA 322
VF MS K +I+WN+++ + G G++A+ + M +GV D VS+ + + C H
Sbjct: 231 VFDEMS-FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH- 288
Query: 323 GLVEEGVRLFDLMKGSVVKPNMKHYGSVVD----LLGRAGR--IKEAYDTINSMPMLPDV 376
E ++L + G +K + Y S+++ L+ R + + EA ++ +V
Sbjct: 289 ---ETDLKLARQIHGLCIK---RGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNV 342
Query: 377 VLWQSLLGASK 387
V W +++ ++K
Sbjct: 343 VSWTTMISSNK 353
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 114/239 (47%), Gaps = 19/239 (7%)
Query: 160 AQKVFDEMPKRD-IASWNAMISGLAQGSRPNEAIALFKRMKEEGW---RPNDVTVLGALS 215
A K+FD +R+ S N IS + + P A+++FK + G+ ++VT+ AL
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 216 ACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI 275
AC G LK+G +HG+ V V NAV+ MY K G D A +F+N+ ++
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL-VDPDVV 143
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
+WNT++ F D AL+ + +M GV DA +Y AL C + EG L +
Sbjct: 144 SWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFC----VGSEGFLLGLQL 196
Query: 336 KGSVVKPNMKH----YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ +VVK ++ S + + R+G + A + M D++ W SLL G
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS-FKDMISWNSLLSGLSQEG 254
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/396 (33%), Positives = 209/396 (52%), Gaps = 3/396 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F I ++ W +++G + + + + + +DALT +K C
Sbjct: 163 AQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222
Query: 119 ALTFSEATQIHSQVLRFGF-DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
+H +R F D Y K LD A+K+F+ R++ W
Sbjct: 223 VFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTT 282
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+ISG A+ R EA LF++M E PN T+ L +CS LG+L+ G+ VHGY++
Sbjct: 283 LISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG 342
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
++M+ + + IDMY++CG + A +VF M +++I+W++MI AF +NG +ALD
Sbjct: 343 IEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINAFGINGLFEEALDCF 401
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGR 356
+M V P++V++++ L AC+H+G V+EG + F+ M + V P +HY +VDLLGR
Sbjct: 402 HKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGR 461
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLL 416
AG I EA I++MP+ P W +LL A + + V++A + KL+ M +VLL
Sbjct: 462 AGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLL 521
Query: 417 SNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEI 452
SN+YA W V VR M K RK G S TE+
Sbjct: 522 SNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 161/345 (46%), Gaps = 7/345 (2%)
Query: 56 LSFAAQIFRRIQNPSTN--DWNAVLRGLAMSPQP--TQAISWYRSVSRSPQKVDALTCSF 111
L FA F RI N WN +L G + S + + Y + R VD+ F
Sbjct: 55 LDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVF 114
Query: 112 ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD 171
A+K C IH ++ G D YA+ G +++AQKVFDE+P R+
Sbjct: 115 AIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRN 174
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
W ++ G + S+ E LF M++ G + +T++ + AC + A K G+ VHG
Sbjct: 175 SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHG 234
Query: 232 YIVDEK-LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
+ +D + + ++IDMY KC +D A +F+ S ++++ W T+I FA
Sbjct: 235 VSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET-SVDRNVVMWTTLISGFAKCERA 293
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV 350
+A DL QM + + P+ + A L +C+ G + G + M + ++ + ++ S
Sbjct: 294 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSF 353
Query: 351 VDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+D+ R G I+ A + MP +V+ W S++ A G E A
Sbjct: 354 IDMYARCGNIQMARTVFDMMPE-RNVISWSSMINAFGINGLFEEA 397
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 17/269 (6%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L A ++F + + W ++ G A + +A +R + R + T + L
Sbjct: 262 LDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVS 321
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
C+ + +H ++R G + YA+ G++ A+ VFD MP+R++ SW
Sbjct: 322 CSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISW 381
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-----EIVH 230
++MI+ EA+ F +MK + PN VT + LSACS G +K+G +
Sbjct: 382 SSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441
Query: 231 GY-IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
Y +V E+ +V D+ + G + +A S NM W ++ A +
Sbjct: 442 DYGVVPEEEHYACMV-----DLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRI--- 493
Query: 290 GYKALDLLDQMA--LDGVHPDAVSYLAAL 316
+K +DL ++A L + P+ S L
Sbjct: 494 -HKEVDLAGEIAEKLLSMEPEKSSVYVLL 521
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 141/295 (47%), Gaps = 10/295 (3%)
Query: 117 ARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP--KRDIAS 174
++A T + Q+H++V+ GF+ Y ++ LD A F+ +P KR+ S
Sbjct: 15 SQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHS 74
Query: 175 WNAMISGLAQGSRP--NEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
WN ++SG ++ ++ + L+ RM+ + ++ A+ AC LG L+ G ++HG
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
+ LD + V ++++MY++ G ++ A VF + S++ W ++ + +
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVL-WGVLMKGYLKYSKDPE 193
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNH--AGLVEEGVRLFDLMKGSVVKPNMKHYGSV 350
L M G+ DA++ + + AC + AG V + V + + + + + S+
Sbjct: 194 VFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ-ASI 252
Query: 351 VDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL-GASKTYGNVEMAEMASRKLVE 404
+D+ + R+ + + + +VV+W +L+ G +K VE ++ + L E
Sbjct: 253 IDMYVKC-RLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 148/496 (29%), Positives = 242/496 (48%), Gaps = 19/496 (3%)
Query: 95 RSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKT 154
R V S + D T + + G +A +A ++ +++ Y K
Sbjct: 407 RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKN 466
Query: 155 GDLDAAQKVFDEMPK-----RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVT 209
GD A +F M K R+ A+WN +I+G Q + +EA+ LF++M+ + PN VT
Sbjct: 467 GDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
+L L AC+ L K +HG ++ LD V NA+ D Y+K G ++ + ++F M
Sbjct: 527 ILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME 586
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
TK +ITWN++I + ++G AL L +QM G+ P+ + + + A G V+EG
Sbjct: 587 -TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGK 645
Query: 330 RLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKT 388
++F + + P ++H ++V L GRA R++EA I M + + +W+S L +
Sbjct: 646 KVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRI 705
Query: 389 YGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
+G+++MA A+ L + + ++S +YA + + ++K G S
Sbjct: 706 HGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQS 765
Query: 449 YTEIDCKIHKFINGDQSHPNWKEIYA---KMDEIKFRIKAYGYTAKTDLVLHDIGEEDKD 505
+ E+ IH F GDQS +Y KM + R Y I EE ++
Sbjct: 766 WIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELW-------IEEEGRE 818
Query: 506 NALNYHSEKLAVAYGLIST--VNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRA 563
HSEK A+A+GLIS+ + T I+++KNLR+C DCH K +S Y +I++ D
Sbjct: 819 ETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTR 878
Query: 564 RFGRFKGGVCSCGDYW 579
FK G CSC DYW
Sbjct: 879 CLHHFKNGDCSCKDYW 894
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 150/298 (50%), Gaps = 11/298 (3%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
YAK G + A+KVFD M +R++ +W+AMI ++ +R E LF+ M ++G P+D
Sbjct: 125 YAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLF 184
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
L C+ G ++ G+++H ++ + + V N+++ +Y+KCG +D A F+ M
Sbjct: 185 PKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR- 243
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+ +I WN++++A+ NG +A++L+ +M +G+ P V++ + N G + +
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMD 303
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM---LPDVVLWQSLLGASK 387
L M+ + ++ + +++ L G +A D M + +P+ V S + A
Sbjct: 304 LMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS 363
Query: 388 TYGNVEMAEMASRKLVEMGSNSCGDFVLLSN----VYAARQRWHDVKRVREAMITKDV 441
+ V+MG D VL+ N +Y+ + D ++V +++ KDV
Sbjct: 364 CLKVINQGSEVHSIAVKMGFI---DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 418
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 35/343 (10%)
Query: 41 RTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRS 100
TKLL + A ++ A ++F ++ + W+A++ + + + +R + +
Sbjct: 118 ETKLLSMYA--KCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 101 PQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAA 160
D L+GCA IHS V++ G + YAK G+LD A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 161 QKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQL 220
K F M +RD+ +WN+++ Q + EA+ L K M++EG P VT + +QL
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL 295
Query: 221 GALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTM 280
G C+A +D+ K + T + TW M
Sbjct: 296 GK----------------------CDAAMDLMQK----------METFGITADVFTWTAM 323
Query: 281 IMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVV 340
I NG Y+ALD+ +M L GV P+AV+ ++A+ AC+ ++ +G + +
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 341 KPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
++ S+VD+ + G++++A +S+ DV W S++
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN-KDVYTWNSMI 425
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 144/326 (44%), Gaps = 48/326 (14%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
W A++ GL + QA+ +R + + +A+T A+ C+ ++ +++HS +
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ GF Y+K G L+ A+KVFD + +D+ +WN+MI+G Q +A
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYE 439
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
LF RM++ RP N+I N +I Y
Sbjct: 440 LFTRMQDANLRP-----------------------------------NIITWNTMISGYI 464
Query: 254 KCGFVDKAYSVFQNMS----CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDA 309
K G +A +FQ M ++ TWN +I + NG +AL+L +M P++
Sbjct: 465 KNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNS 524
Query: 310 VSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV----VDLLGRAGRIKEAYD 365
V+ L+ L AC A L+ G ++ + G V++ N+ +V D ++G I+ +
Sbjct: 525 VTILSLLPAC--ANLL--GAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRT 580
Query: 366 TINSMPMLPDVVLWQSLLGASKTYGN 391
M D++ W SL+G +G+
Sbjct: 581 IFLGMET-KDIITWNSLIGGYVLHGS 605
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 12/245 (4%)
Query: 54 ADLSFAAQIFRRIQNP-----STNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALT 108
D A +F+R++ +T WN ++ G + + +A+ +R + S +++T
Sbjct: 467 GDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 109 CSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP 168
L CA L +IH VLR DA YAK+GD++ ++ +F M
Sbjct: 527 ILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME 586
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
+DI +WN++I G A+ALF +MK +G PN T+ + A +G + +G+
Sbjct: 587 TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Query: 229 VHGYIVDEKLDMNVIV----CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAF 284
V I + D ++I C+A++ +Y + +++A Q M+ W + +
Sbjct: 647 VFYSIAN---DYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGC 703
Query: 285 AMNGD 289
++GD
Sbjct: 704 RIHGD 708
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH---GYIVDEKLDMNVIVCN 246
EA + ++G + T L L +C G++ G I+H G + +V V
Sbjct: 64 EAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEP----DVFVET 119
Query: 247 AVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVH 306
++ MY+KCG + A VF +M ++L TW+ MI A++ + L M DGV
Sbjct: 120 KLLSMYAKCGCIADARKVFDSMR-ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 307 PDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDT 366
PD + L C + G VE G + ++ + ++ S++ + + G + A
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 367 INSMPMLPDVVLWQSLLGASKTYGNVEMA 395
M DV+ W S+L A G E A
Sbjct: 239 FRRMRE-RDVIAWNSVLLAYCQNGKHEEA 266
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 206/408 (50%), Gaps = 11/408 (2%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
++++ ++F I + W +++ G + + + AI +R + + K + L
Sbjct: 156 GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL 215
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXX--------XXXXXXXYAKTGDLDAAQKVFD 165
C R H + GFD YAK GDL A+ +FD
Sbjct: 216 VACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFD 275
Query: 166 EMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ 225
MP+R + SWN++I+G +Q EA+ +F M + G P+ VT L + A G +
Sbjct: 276 GMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL 335
Query: 226 GEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFA 285
G+ +H Y+ + + A+++MY+K G + A F+++ K I W +I+ A
Sbjct: 336 GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLA 394
Query: 286 MNGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKG-SVVKPN 343
+G G +AL + +M G PD ++YL L AC+H GLVEEG R F M+ ++P
Sbjct: 395 SHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPT 454
Query: 344 MKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLV 403
++HYG +VD+L RAGR +EA + +MP+ P+V +W +LL + N+E+ + +
Sbjct: 455 VEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVA 514
Query: 404 EMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTE 451
E G +VLLSN+YA RW DVK +RE+M +K V KV G S E
Sbjct: 515 EPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 201/415 (48%), Gaps = 11/415 (2%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAA-DLSFAAQIFRRIQNPSTNDW 74
C SL+ + QL +I + ++L++ C P +LS+A +F I PS W
Sbjct: 16 CRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIW 75
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
N+++RG + SP P +A+ +Y+ + R D T + LK C+ + +H V++
Sbjct: 76 NSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVK 135
Query: 135 FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIAL 194
GF+ Y G+++ +VF+++P+ ++ +W ++ISG +R ++AI
Sbjct: 136 TGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEA 195
Query: 195 FKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI--------VDEKLDMNVIVCN 246
F+ M+ G + N+ ++ L AC + + G+ HG++ K+ NVI+
Sbjct: 196 FREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILAT 255
Query: 247 AVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVH 306
++IDMY+KCG + A +F M ++L++WN++I ++ NGD +AL + M G+
Sbjct: 256 SLIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 307 PDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDT 366
PD V++L+ + A G + G + + + + ++V++ + G + A
Sbjct: 315 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 374
Query: 367 INSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYA 421
+ D + W ++ ++G+ A +++ E G+ + L +YA
Sbjct: 375 FEDLEK-KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYA 428
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Query: 198 MKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCG- 256
M ++ ++P +L L C L L Q +HG ++ + NVI + +ID + C
Sbjct: 1 MMKKHYKP----ILSQLENCRSLVELNQ---LHGLMIKSSVIRNVIPLSRLIDFCTTCPE 53
Query: 257 --FVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLA 314
+ A SVF+++ C S+ WN+MI ++ + + KAL +M G PD ++
Sbjct: 54 TMNLSYARSVFESIDC-PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 112
Query: 315 ALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLP 374
L AC+ ++ G + + + + NM ++ + G + +P
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW- 171
Query: 375 DVVLWQSLL 383
+VV W SL+
Sbjct: 172 NVVAWGSLI 180
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 243/471 (51%), Gaps = 44/471 (9%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAIS-PAADLSFAAQIFRRIQNPSTNDWNAVLRGL 81
K++ A +I TG F P ++L + LS+A Q+F + P+ + +N ++ G
Sbjct: 54 KKIHADIIKTG---FQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 82 AMSPQPTQAISWYRSVSRSPQKVDALTCSFALK-----GCARALTFSEATQIHSQVLRFG 136
+ + + +S S +K D T S LK G L S +H+++++
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 137 FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK--------------------------- 169
+ Y K+G L++A+ VF+ M
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 170 ----RDIASWNAMISGLAQ-GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALK 224
+DI +NAM+ G ++ G ++ ++ M+ G+ PN T + ACS L + +
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 225 QGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAF 284
G+ VH I+ + ++ + ++++DMY+KCG ++ A VF M K++ +W +MI +
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ-EKNVFSWTSMIDGY 349
Query: 285 AMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPN 343
NG+ +AL+L +M + P+ V++L AL AC+H+GLV++G +F+ M+ +KP
Sbjct: 350 GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 344 MKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLV 403
M+HY +VDL+GRAG + +A++ +MP PD +W +LL + +GNVE+A +A+ +L
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Query: 404 EMGSNS-CGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEID 453
++ ++ G ++ LSNVYA+ +W +V ++RE M + + K G S+T D
Sbjct: 470 KLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 183/302 (60%), Gaps = 5/302 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
YAK GD+ +A+ +F+E D+ +W+A+I G AQ +PNEA +F M + +P++ +
Sbjct: 248 YAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIM 307
Query: 211 LGALSACSQLGALKQGEIVHGYIVDE--KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
+G +SACSQ+G + E V Y+ K + +V A+IDM +KCG +D+A +F+ M
Sbjct: 308 VGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEM 366
Query: 269 SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG 328
+ L+++ +M+ A++G G +A+ L ++M +G+ PD V++ L C + LVEEG
Sbjct: 367 P-QRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEG 425
Query: 329 VRLFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASK 387
+R F+LM K + + HY +V+LL R G++KEAY+ I SMP W SLLG
Sbjct: 426 LRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCS 485
Query: 388 TYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGF 447
+GN E+AE+ +R L E+ S G +VLLSN+YAA RW DV +R+ M + K+ G
Sbjct: 486 LHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGR 545
Query: 448 SY 449
S+
Sbjct: 546 SW 547
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 178/395 (45%), Gaps = 17/395 (4%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWN 75
C S IH+ Q+ A +I G + + + S ++ LS+++ +F R+ +P T WN
Sbjct: 20 CKSEIHLNQIHARIIRKG-LEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWN 78
Query: 76 AVLRGLAMSPQPTQAISWYRSVSRSP-QKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
+++G + + +S + R+ + D T +K C+ + +H VLR
Sbjct: 79 HLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLR 138
Query: 135 FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIAL 194
GFD Y K DL +A+KVF EMP+R+ SW A++ + EA ++
Sbjct: 139 IGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSM 198
Query: 195 FKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG-YIVDEKLDMNVIVCNAVIDMYS 253
F M E LG+ +A G +K G++V+ + DE ++I ++ID Y+
Sbjct: 199 FDLMPERN--------LGSWNALVD-GLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYA 249
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYL 313
K G + A +F+ + W+ +I+ +A NG +A + +M V PD +
Sbjct: 250 KGGDMVSARDLFEEARGV-DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMV 308
Query: 314 AALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY--GSVVDLLGRAGRIKEAYDTINSMP 371
+ AC+ G E ++ + + K + HY +++D+ + G + A MP
Sbjct: 309 GLMSACSQMGCFELCEKVDSYLHQRMNKFS-SHYVVPALIDMNAKCGHMDRAAKLFEEMP 367
Query: 372 MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
D+V + S++ +G A K+V+ G
Sbjct: 368 Q-RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG 401
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 182/302 (60%), Gaps = 5/302 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y + GD+ A+ +F + RD+ WN +I+G AQ ++AI F M+ EG+ P+ VTV
Sbjct: 218 YFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTV 277
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
LSAC+Q G L G VH I +++N V NA+IDMY+KCG ++ A SVF+++S
Sbjct: 278 SSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS- 336
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+S+ N+MI A++G G +AL++ M + PD ++++A L AC H G + EG++
Sbjct: 337 VRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLK 396
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+F MK VKPN+KH+G ++ LLGR+G++KEAY + M + P+ + +LLGA K +
Sbjct: 397 IFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHM 456
Query: 391 NVEMAEMASRKLVEMGS--NSCGDFVL--LSNVYAARQRWHDVKRVREAMITKDVRKVPG 446
+ EMAE + + GS NS + L +SN+YA +RW + +R M + + K PG
Sbjct: 457 DTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPG 516
Query: 447 FS 448
S
Sbjct: 517 LS 518
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
D+ A IF R+ WN ++ G A + AI + ++ + DA+T S L
Sbjct: 222 GDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSIL 281
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
CA++ ++HS + G + YAK GDL+ A VF+ + R +A
Sbjct: 282 SACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA 341
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
N+MIS LA + EA+ +F M+ +P+++T + L+AC G L +G + +
Sbjct: 342 CCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM 401
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
+ + NV +I + + G + +AY + + M
Sbjct: 402 KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 35/316 (11%)
Query: 87 PTQAISWYRSVSRSPQKVDALTCSFALKGCARALT-FSEATQIHSQVLRFGFDAXXXXXX 145
P QA+ Y + R L+ CA + +HS+ ++FG +
Sbjct: 27 PIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGS 85
Query: 146 XXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRP 205
Y K G + +A+KVFDEMP+R++A+WNAMI G A LF +E
Sbjct: 86 SLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF---EEISVCR 142
Query: 206 NDVTVLGALSACS-----------------QLGALKQGEIVHG-YIVDEKL--------- 238
N VT + + +L +K ++ G Y+ + K+
Sbjct: 143 NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFED 202
Query: 239 --DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDL 296
+ N V + ++ Y + G V +A ++F + + L+ WNT+I +A NG A+D
Sbjct: 203 IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV-FARDLVIWNTLIAGYAQNGYSDDAIDA 261
Query: 297 LDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGR 356
M +G PDAV+ + L AC +G ++ G + L+ ++ N +++D+ +
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 321
Query: 357 AGRIKEAYDTINSMPM 372
G ++ A S+ +
Sbjct: 322 CGDLENATSVFESISV 337
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 107/221 (48%), Gaps = 10/221 (4%)
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEG-WRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
N + + +++GS P +A+ L+ ++ G + P V ++ AC + + G+++H +
Sbjct: 16 NLIKNHISRGS-PIQALVLYGGIRRRGVYFPGWVPLILRACACV-VPRVVLGKLLHSESI 73
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
+ +V+V +++I MY KCG V A VF M +++ TWN MI + NGD A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMP-ERNVATWNAMIGGYMSNGDAVLAS 132
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
L ++++ V + V+++ + +E+ LF+ M + N+K + ++ +
Sbjct: 133 GLFEEIS---VCRNTVTWIEMIKGYGKRIEIEKARELFERMPFEL--KNVKAWSVMLGVY 187
Query: 355 GRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
++++A +P + +W ++ G+V A
Sbjct: 188 VNNRKMEDARKFFEDIPE-KNAFVWSLMMSGYFRIGDVHEA 227
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 214/422 (50%), Gaps = 47/422 (11%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSR---------SPQKVDALTCSFALKGCA--RALTF 122
+N +LR ++ P A Y + R S D+ T F LK + R +
Sbjct: 80 FNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSL 139
Query: 123 SEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGL 182
+H L+ GF++ Y G++ A KVFDEMP+R+ +WN MI+GL
Sbjct: 140 LLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGL 199
Query: 183 -------------------------------AQGSRPNEAIALFKRMKE-EGWRPNDVTV 210
A+ +P EAI LF RM + +PN++T+
Sbjct: 200 TNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITI 259
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKL-DMNVIVCNAVIDMYSKCGFVDKAYSVFQNM- 268
L L A LG LK VH Y+ ++ V N++ID Y+KCG + A+ F +
Sbjct: 260 LAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIP 319
Query: 269 SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG 328
+ K+L++W TMI AFA++G G +A+ + M G+ P+ V+ ++ L AC+H GL EE
Sbjct: 320 NGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEE 379
Query: 329 -VRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGAS 386
+ F+ M + P++KHYG +VD+L R GR++EA +P+ V+W+ LLGA
Sbjct: 380 FLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGAC 439
Query: 387 KTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPG 446
Y + E+AE +RKL+E+ + GD+VL+SN++ R+ D +R R+ M + V K+PG
Sbjct: 440 SVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPG 499
Query: 447 FS 448
S
Sbjct: 500 HS 501
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 8/251 (3%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWY-RSVSRSPQKVD 105
+ ++ D A ++ N + W ++ G A +P +AI + R V+ K +
Sbjct: 196 ITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPN 255
Query: 106 ALTCSFALKGCARALTFSEATQIHSQVLRFGF-DAXXXXXXXXXXXYAKTGDLDAAQKVF 164
+T L +H+ V + GF YAK G + +A K F
Sbjct: 256 EITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFF 315
Query: 165 DEMP--KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGA 222
E+P ++++ SW MIS A EA+++FK M+ G +PN VT++ L+ACS G
Sbjct: 316 IEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH-GG 374
Query: 223 LKQGEIVHGY--IVDE-KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNT 279
L + E + + +V+E K+ +V ++DM + G +++A + + + + W
Sbjct: 375 LAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRM 434
Query: 280 MIMAFAMNGDG 290
++ A ++ D
Sbjct: 435 LLGACSVYDDA 445
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 217/415 (52%), Gaps = 41/415 (9%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F ++N + WN+++ GL Q ++A Y + P K D ++ + +KG
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLVQRKQISEA---YELFEKMPGK-DMVSWTDMIKG--- 381
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
++ G++ ++F MP++D +W AM
Sbjct: 382 --------------------------------FSGKGEISKCVELFGMMPEKDNITWTAM 409
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
IS EA+ F +M ++ PN T LSA + L L +G +HG +V +
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
++ V N+++ MY KCG + AY +F +S +++++NTMI ++ NG G KAL L
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS-EPNIVSYNTMISGYSYNGFGKKALKLFS 528
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRA 357
+ G P+ V++LA L AC H G V+ G + F MK S ++P HY +VDLLGR+
Sbjct: 529 MLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRS 588
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLS 417
G + +A + I++MP P +W SLL ASKT+ V++AE+A++KL+E+ +S +V+LS
Sbjct: 589 GLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLS 648
Query: 418 NVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEI 472
+Y+ + D R+ +K ++K PG S+ + ++H F+ GD+S N +EI
Sbjct: 649 QLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 131/288 (45%), Gaps = 14/288 (4%)
Query: 50 ISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKV-DALT 108
I DL A ++F I + + ++ G + + +A Y + +P K D++
Sbjct: 123 IKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLY---AETPVKFRDSVA 179
Query: 109 CSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP 168
+ L G RA ++EA ++ + Y K G + A+ +FD M
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAV----KEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG-WRPNDVTVLGALSACSQLGALKQGE 227
+R++ +W AMI G + + LF RM++EG + N T+ AC ++G
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
+HG + L+ ++ + N+++ MYSK G++ +A +VF M K ++WN++I
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK-NKDSVSWNSLITGLVQR 354
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
+A +L ++M D VS+ + + G + + V LF +M
Sbjct: 355 KQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGMM 398
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 11/241 (4%)
Query: 49 AISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALT 108
S ++S ++F + W A++ + +A+ W+ + + ++ T
Sbjct: 381 GFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Query: 109 CSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP 168
S L A E QIH +V++ Y K G+ + A K+F +
Sbjct: 441 FSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS 500
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
+ +I S+N MISG + +A+ LF ++ G PN VT L LSAC +G + G
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG-- 558
Query: 229 VHGYIVDEKLDMNV------IVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
Y K N+ C ++D+ + G +D A ++ M C W +++
Sbjct: 559 -WKYFKSMKSSYNIEPGPDHYAC--MVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLS 615
Query: 283 A 283
A
Sbjct: 616 A 616
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 133/330 (40%), Gaps = 50/330 (15%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWY-RSVSRSPQKVDALTCSFALKGCA 117
A +F R+ + W A++ G + + R KV++ T + K C
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
+ + E +QIH V R + Y+K G + A+ VF M +D SWN+
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+I+GL Q + +EA LF++M +
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGK------------------------------------ 370
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
+++ +I +S G + K +F M K ITW MI AF NG +AL
Sbjct: 371 ---DMVSWTDMIKGFSGKGEISKCVELF-GMMPEKDNITWTAMISAFVSNGYYEEALCWF 426
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH----YGSVVDL 353
+M V P++ ++ + L A + EG+++ G VVK N+ + S+V +
Sbjct: 427 HKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI----HGRVVKMNIVNDLSVQNSLVSM 482
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+ G +AY + + P++V + +++
Sbjct: 483 YCKCGNTNDAYKIFSCISE-PNIVSYNTMI 511
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 109/270 (40%), Gaps = 35/270 (12%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
+A+ G+L A+ +F +M R I SW AMIS A+ + ++A +F M + +
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 211 LGALSACSQLG-------------ALKQGEIVHGYIVDEKLD-------------MNVIV 244
+ LG A+ ++ G++ + D + +
Sbjct: 120 TAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVA 179
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG 304
N ++ Y + G ++A VFQ M+ K +++ ++M+ + G A L D+M
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMA-VKEVVSCSSMVHGYCKMGRIVDARSLFDRMT--- 235
Query: 305 VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEA 363
+ +++ A + AG E+G LF M+ VK N + R +E
Sbjct: 236 -ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREG 294
Query: 364 ---YDTINSMPMLPDVVLWQSLLGASKTYG 390
+ ++ MP+ D+ L SL+ G
Sbjct: 295 SQIHGLVSRMPLEFDLFLGNSLMSMYSKLG 324
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 226/476 (47%), Gaps = 40/476 (8%)
Query: 17 HSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNA 76
+S+ H+ Q+ A LIT+G F +LL+ + S D S+ I+R I N
Sbjct: 33 NSITHLFQVHARLITSGNFWDSSWAIRLLK--SSSRFGDSSYTVSIYRSIGKLYCA--NP 88
Query: 77 VLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFG 136
V + +S P QA+ +Y + R D+ T + + H Q ++ G
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 137 FDAXXXXXXXXXXXYA-------------------------------KTGDLDAAQKVFD 165
D Y + GD+ AA K+FD
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 166 EMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ 225
EMP ++I SWN MIS + P +I+LF+ M G++ N+ T++ L+AC + LK+
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 226 GEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFA 285
G VH ++ L+ +V++ A+IDMY KC V A +F ++S ++ +TWN MI+A
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLS-IRNKVTWNVMILAHC 327
Query: 286 MNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNM 344
++G L+L + M + PD V+++ LC C AGLV +G + LM +KPN
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNF 387
Query: 345 KHYGSVVDLLGRAGRIKEAYDTINSMP---MLPDVVLWQSLLGASKTYGNVEMAEMASRK 401
H + +L AG +EA + + ++P + P+ W +LL +S+ GN + E ++
Sbjct: 388 GHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKS 447
Query: 402 LVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIH 457
L+E + + LL N+Y+ RW DV RVRE + + + ++PG ++ +H
Sbjct: 448 LIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 224/469 (47%), Gaps = 34/469 (7%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRS-VSRSPQKVDALTCSFALKGCA 117
A ++F + WN+++ G + S Y++ ++ S K + +T + C
Sbjct: 186 ARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACG 245
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD------ 171
++ ++H +++ YAK G LD A+ +FDEM ++D
Sbjct: 246 QSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGA 305
Query: 172 -------------------------IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPN 206
+++WNAMISGL Q + E I F+ M G RPN
Sbjct: 306 IISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPN 365
Query: 207 DVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ 266
VT+ L + + LK G+ +H + + D N+ V ++ID Y+K GF+ A VF
Sbjct: 366 TVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFD 425
Query: 267 NMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVE 326
N +SLI W +I A+A++GD A L DQM G PD V+ A L A H+G +
Sbjct: 426 NCK-DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSD 484
Query: 327 EGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+FD M ++P ++HY +V +L RAG++ +A + I+ MP+ P +W +LL
Sbjct: 485 MAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNG 544
Query: 386 SKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVP 445
+ G++E+A A +L EM + G++ +++N+Y RW + + VR M ++K+P
Sbjct: 545 ASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIP 604
Query: 446 GFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDL 494
G S+ E + + FI D S KE+Y ++ + + Y K +L
Sbjct: 605 GTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYIRKQEL 653
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 165/354 (46%), Gaps = 21/354 (5%)
Query: 20 IHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAAD-LSFAAQIFRRIQNPSTNDWNAVL 78
+H+ QL A ++ F P +L + D A +F I + +NA+L
Sbjct: 39 LHVLQLHARIVV---FSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALL 95
Query: 79 RGLAMSPQPTQA----ISW-----YRSVSRSPQKVDALTCSF-ALKGCARALTFSEATQI 128
A +SW Y S + P + +++C AL GC S A Q+
Sbjct: 96 IAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSI-SISCVLKALSGCDDFWLGSLARQV 154
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRP 188
H V+R GFD+ Y K ++++A+KVFDEM +RD+ SWN+MISG +Q
Sbjct: 155 HGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSF 214
Query: 189 NEAIALFKRMKE-EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNA 247
+ ++K M ++PN VTV+ AC Q L G VH +++ + M++ +CNA
Sbjct: 215 EDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNA 274
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
VI Y+KCG +D A ++F MS K +T+ +I + +G +A+ L +M G+
Sbjct: 275 VIGFYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLST 333
Query: 308 DAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
+ ++ L NH EE + F M +PN S++ L + +K
Sbjct: 334 -WNAMISGLMQNNHH---EEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLK 383
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 209/413 (50%), Gaps = 3/413 (0%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
WN + G + A+ + P +D + LK C+ +IH +
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+D Y+K DL A VF + + + +WN++ISG AQ ++ EA
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH 367
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMN-VIVCNAVIDMY 252
L + M G++PN +T+ L C+++ L+ G+ H YI+ K + ++ N+++D+Y
Sbjct: 368 LLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVY 427
Query: 253 SKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
+K G + A V MS + +T+ ++I + G+G AL L +M G+ PD V+
Sbjct: 428 AKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTV 486
Query: 313 LAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP 371
+A L AC+H+ LV EG RLF M+ ++P ++H+ +VDL GRAG + +A D I++MP
Sbjct: 487 VAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP 546
Query: 372 MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKR 431
P W +LL A +GN ++ + A+ KL+EM + G +VL++N+YAA W +
Sbjct: 547 YKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAE 606
Query: 432 VREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIK 484
VR M V+K PG ++ + D F GD S P Y +D + +K
Sbjct: 607 VRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 8/244 (3%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S DL A +FR+ + S WN+++ G A + +A R + + + +++T +
Sbjct: 326 SKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLA 385
Query: 111 FALKGCARALTFSEATQIHSQVLRFG-FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
L CAR + H +LR F YAK+G + AA++V D M K
Sbjct: 386 SILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSK 445
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
RD ++ ++I G A+ALFK M G +P+ VTV+ LSACS + +GE +
Sbjct: 446 RDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERL 505
Query: 230 HGYIVDEKLDMNVIVC----NAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFA 285
+ + + + C + ++D+Y + GF+ KA + NM S TW T++ A
Sbjct: 506 ---FMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACH 562
Query: 286 MNGD 289
++G+
Sbjct: 563 IHGN 566
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 168/406 (41%), Gaps = 47/406 (11%)
Query: 24 QLQAHLITTG-KFHFHPSRTKLLELCAISPAADLSFAAQ-IFRRIQNPSTNDWNAVLRGL 81
Q+ AH I++G ++H + +L A +L AQ I WN ++
Sbjct: 64 QVHAHCISSGVEYH----SVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASY 119
Query: 82 AMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXX 141
A + + I+ Y+ + + DA T LK C L + +H + + +
Sbjct: 120 AKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSL 179
Query: 142 XXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEE 201
Y + ++ A+++FD M +RD SWNA+I+ A +EA LF +M
Sbjct: 180 YVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFS 239
Query: 202 G-------WR---------PNDVTVLGALS-------------------ACSQLGALKQG 226
G W N V LG +S ACS +GA++ G
Sbjct: 240 GVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLG 299
Query: 227 EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAM 286
+ +HG + D V N +I MYSKC + A VF+ SL TWN++I +A
Sbjct: 300 KEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE-ENSLCTWNSIISGYAQ 358
Query: 287 NGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF-DLMKGSVVKPNMK 345
+A LL +M + G P++++ + L C ++ G +++ K
Sbjct: 359 LNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM 418
Query: 346 HYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGN 391
+ S+VD+ ++G+I A + M D V + SL+ YGN
Sbjct: 419 LWNSLVDVYAKSGKIVAAKQVSDLMSK-RDEVTYTSLIDG---YGN 460
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 1/200 (0%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L C F Q+H+ + G + Y+ + AQ + +
Sbjct: 50 LSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHP 109
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
WN +I+ A+ E IA +KRM +G RP+ T L AC + + G +VHG
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
I ++ VCNA+I MY + + A +F M + ++WN +I +A G +
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM-FERDAVSWNAVINCYASEGMWSE 228
Query: 293 ALDLLDQMALDGVHPDAVSY 312
A +L D+M GV +++
Sbjct: 229 AFELFDKMWFSGVEVSVITW 248
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 214/410 (52%), Gaps = 3/410 (0%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARAL 120
++ I N W ++ GL + +A+ + + +S + + + + CA+
Sbjct: 301 RVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLG 360
Query: 121 TFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMIS 180
+F +H VLR G+ YAK G LD + +F+ M +RD+ SWNA+IS
Sbjct: 361 SFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIIS 420
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPND-VTVLGALSACSQLGALKQGEIVHGYIVDEKLD 239
G AQ +A+ LF+ MK + + D TV+ L ACS GAL G+++H ++ +
Sbjct: 421 GYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIR 480
Query: 240 MNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
+V A++DMYSKCG+++ A F ++S K +++W +I + +G G AL++ +
Sbjct: 481 PCSLVDTALVDMYSKCGYLEAAQRCFDSIS-WKDVVSWGILIAGYGFHGKGDIALEIYSE 539
Query: 300 MALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRAG 358
G+ P+ V +LA L +C+H G+V++G+++F M + V+PN +H VVDLL RA
Sbjct: 540 FLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAK 599
Query: 359 RIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSN 418
RI++A+ P + + +L A + G E+ ++ ++E+ G +V L +
Sbjct: 600 RIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGH 659
Query: 419 VYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPN 468
+AA +RW DV M + ++K+PG+S E++ K F SH +
Sbjct: 660 SFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSD 709
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 163/338 (48%), Gaps = 3/338 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F +++ WN ++ G A ++ + + + D T +L
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+H Q+++ GFD Y K G +A+ +V + +P +D+ W M
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVM 317
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
ISGL + R +A+ +F M + G + + +++C+QLG+ G VHGY++
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGY 377
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
++ N++I MY+KCG +DK+ +F+ M+ + L++WN +I +A N D KAL L +
Sbjct: 378 TLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISGYAQNVDLCKALLLFE 436
Query: 299 QMALDGVHP-DAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRA 357
+M V D+ + ++ L AC+ AG + G + ++ S ++P ++VD+ +
Sbjct: 437 EMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKC 496
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
G ++ A +S+ DVV W L+ +G ++A
Sbjct: 497 GYLEAAQRCFDSISW-KDVVSWGILIAGYGFHGKGDIA 533
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 163/339 (48%), Gaps = 5/339 (1%)
Query: 70 STNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIH 129
ST +N+ + L+ Q +S + S+ + D T LK CA S IH
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIH 69
Query: 130 SQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPN 189
QVL GF + YAK G L A+KVF+EM +RD+ W AMI ++
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
EA +L M+ +G +P VT+L LS + + Q + +H + V D ++ V N+++
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLE---ITQLQCLHDFAVIYGFDCDIAVMNSML 186
Query: 250 DMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDA 309
++Y KC V A +F M + +++WNTMI +A G+ + L LL +M DG+ PD
Sbjct: 187 NLYCKCDHVGDAKDLFDQME-QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQ 245
Query: 310 VSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINS 369
++ A+L +E G L + + +M +++ + + G+ + +Y + +
Sbjct: 246 QTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLET 305
Query: 370 MPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSN 408
+P DVV W ++ G E A + ++++ GS+
Sbjct: 306 IPN-KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 6/265 (2%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L+ A ++F ++ W A++ + + +A S + K +T L G
Sbjct: 97 LAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSG 156
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
L ++ +H + +GFD Y K + A+ +FD+M +RD+ SW
Sbjct: 157 ---VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSW 213
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
N MISG A +E + L RM+ +G RP+ T +LS + L+ G ++H IV
Sbjct: 214 NTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVK 273
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
D+++ + A+I MY KCG + +Y V + + K ++ W MI G KAL
Sbjct: 274 TGFDVDMHLKTALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISGLMRLGRAEKALI 332
Query: 296 LLDQMALDG--VHPDAVSYLAALCA 318
+ +M G + +A++ + A CA
Sbjct: 333 VFSEMLQSGSDLSSEAIASVVASCA 357
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 204/397 (51%), Gaps = 10/397 (2%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKV-DALTCSFALKGCA 117
A ++F + P W AVL + + +A+ + ++ R V D T L C
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
+ +IH +++ G + Y K G + A++VF+ M K++ SW+A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGA-LSACSQLGALKQGEIVHGYIVDE 236
++ G Q +AI +F+ M+E+ D+ G L AC+ L A++ G+ +HG V
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEK-----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDL 296
NVIV +A+ID+Y K G +D A V+ MS +++ITWN M+ A A NG G +A+
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMS-IRNMITWNAMLSALAQNGRGEEAVSF 450
Query: 297 LDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLG 355
+ M G+ PD +S++A L AC H G+V+EG F LM S +KP +HY ++DLLG
Sbjct: 451 FNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLG 510
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNV-EMAEMASRKLVEMGSNSCGDFV 414
RAG +EA + + D LW LLG + +AE +++++E+ +V
Sbjct: 511 RAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYV 570
Query: 415 LLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTE 451
LLSN+Y A R D +R+ M+ + V K G S+ +
Sbjct: 571 LLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 177/394 (44%), Gaps = 16/394 (4%)
Query: 18 SLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAV 77
S IH Q AH++ +G LL L + ++F W ++
Sbjct: 76 SFIHGIQFHAHVVKSGLETDRNVGNSLLSL-YFKLGPGMRETRRVFDGRFVKDAISWTSM 134
Query: 78 LRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGF 137
+ G + +A+ + + + T S A+K C+ H V+ GF
Sbjct: 135 MSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGF 194
Query: 138 DAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKR 197
+ Y + A++VFDEMP+ D+ W A++S ++ EA+ LF
Sbjct: 195 EWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYA 254
Query: 198 M-KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCG 256
M + +G P+ T L+AC L LKQG+ +HG ++ + NV+V ++++DMY KCG
Sbjct: 255 MHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCG 314
Query: 257 FVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
V +A VF MS K+ ++W+ ++ + NG+ KA+++ +M D + L
Sbjct: 315 SVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVL 369
Query: 317 CACNHAGLVEEGVRLFDLMKGSVVK----PNMKHYGSVVDLLGRAGRIKEAYDTINSMPM 372
AC AGL VRL + G V+ N+ +++DL G++G I A + M
Sbjct: 370 KAC--AGLA--AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS- 424
Query: 373 LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ +++ W ++L A G E A +V+ G
Sbjct: 425 IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 140/321 (43%), Gaps = 4/321 (1%)
Query: 86 QPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXX 145
Q T+AI S S + L+ C + +F Q H+ V++ G +
Sbjct: 41 QLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGN 100
Query: 146 XXXXXYAKTG-DLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWR 204
Y K G + ++VFD +D SW +M+SG G +A+ +F M G
Sbjct: 101 SLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLD 160
Query: 205 PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSV 264
N+ T+ A+ ACS+LG ++ G HG ++ + N + + + +Y A V
Sbjct: 161 ANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRV 220
Query: 265 FQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMAL-DGVHPDAVSYLAALCACNHAG 323
F M +I W ++ AF+ N +AL L M G+ PD ++ L AC +
Sbjct: 221 FDEMP-EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 324 LVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+++G + + + + N+ S++D+ G+ G ++EA N M + V W +LL
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK-KNSVSWSALL 338
Query: 384 GASKTYGNVEMAEMASRKLVE 404
G G E A R++ E
Sbjct: 339 GGYCQNGEHEKAIEIFREMEE 359
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 15/286 (5%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
K++ LIT G + LL++ + A Q+F + ++ W+A+L G
Sbjct: 285 KEIHGKLITNGIGSNVVVESSLLDM--YGKCGSVREARQVFNGMSKKNSVSWSALLGGYC 342
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
+ + +AI +R + ++ D LK CA +IH Q +R G
Sbjct: 343 QNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI 398
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
Y K+G +D+A +V+ +M R++ +WNAM+S LAQ R EA++ F M ++G
Sbjct: 399 VESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Query: 203 WRPNDVTVLGALSACSQLGALKQGE-----IVHGYIVDEKLDMNVIVCNAVIDMYSKCGF 257
+P+ ++ + L+AC G + +G + Y + + + +ID+ + G
Sbjct: 459 IKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY----SCMIDLLGRAGL 514
Query: 258 VDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALD 303
++A ++ + C W ++ A N D + + + + ++
Sbjct: 515 FEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMME 560
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 216/450 (48%), Gaps = 12/450 (2%)
Query: 41 RTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPT-----QAISWYR 95
RT LL++ A L A ++F + + + +NA++ G + T +A +
Sbjct: 290 RTALLDMYA--KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 96 SVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTG 155
+ R + T S LK C+ A T QIH+ + + F + YA G
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMG 407
Query: 156 DLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALS 215
+ + F K+DIASW +MI Q + A LF+++ RP + TV +S
Sbjct: 408 STEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMS 467
Query: 216 ACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI 275
AC+ AL GE + GY + +D V + I MY+K G + A VF + +
Sbjct: 468 ACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ-NPDVA 526
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
T++ MI + A +G +AL++ + M G+ P+ ++L L AC H GLV +G++ F M
Sbjct: 527 TYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCM 586
Query: 336 KGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEM 394
K + PN KH+ +VDLLGR GR+ +A + I S V W++LL + + Y + +
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVI 646
Query: 395 AEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDC 454
+ + +L+E+ + G +VLL N+Y + VRE M + V+K P S+ I
Sbjct: 647 GKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGN 706
Query: 455 KIHKFINGDQSHPNWKEIYA---KMDEIKF 481
+ H F D SHP+ + IY MD + F
Sbjct: 707 QTHSFAVADLSHPSSQMIYTMLETMDNVDF 736
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 127/236 (53%), Gaps = 5/236 (2%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y K +L A+++FD MP+R+I S+N++ISG Q +A+ LF +E + + T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
GAL C + L GE++HG +V L V + N +IDMYSKCG +D+A S+F
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD- 210
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAV---SYLAALCACNHAGLVEE 327
+ ++WN++I + G + L+LL +M DG++ S L A C + G +E+
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 328 GVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
G+ + ++ ++ +++D+ + G +KEA + MP +VV + +++
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPS-KNVVTYNAMI 325
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 163/383 (42%), Gaps = 21/383 (5%)
Query: 55 DLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
+L FA Q+F R+ + +N+++ G QA+ + + K+D T + AL
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
C +H V+ G Y+K G LD A +FD +RD S
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACS---QLGALKQGEIVHG 231
WN++ISG + E + L +M +G + L AC G +++G +H
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD-- 289
Y ++ +++V A++DMY+K G + +A +F M +K+++T+N MI F +
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMDEIT 335
Query: 290 ---GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH 346
+A L M G+ P ++ L AC+ A +E G ++ L+ + + +
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI 395
Query: 347 YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKL---- 402
++++L G ++ S D+ W S++ +E A R+L
Sbjct: 396 GSALIELYALMGSTEDGMQCFASTSK-QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454
Query: 403 -------VEMGSNSCGDFVLLSN 418
V + ++C DF LS+
Sbjct: 455 IRPEEYTVSLMMSACADFAALSS 477
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 216/408 (52%), Gaps = 5/408 (1%)
Query: 55 DLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
D + A +F +++ + W A++ G + + +R++ R + + +T L
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLP 259
Query: 115 GCARALTF--SEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
C L + S +IH R G A Y + G++ ++ +F+ RD+
Sbjct: 260 ACVE-LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDV 318
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
W++MISG A+ +E + L +M++EG N VT+L +SAC+ L VH
Sbjct: 319 VMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 378
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
I+ ++++ NA+IDMY+KCG + A VF ++ K L++W++MI A+ ++G G +
Sbjct: 379 ILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHGHGSE 437
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVD 352
AL++ M G D +++LA L ACNHAGLVEE +F + ++HY ++
Sbjct: 438 ALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYIN 497
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA-EMASRKLVEMGSNSCG 411
LLGR G+I +A++ +MPM P +W SLL A +T+G +++A ++ + +L++ ++
Sbjct: 498 LLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPA 557
Query: 412 DFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKF 459
++VLLS ++ +H + VR M + + K GFS E + +I +
Sbjct: 558 NYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y K D AA VFD+M ++ SW AMISG + LF+ M+ E RPN VT+
Sbjct: 195 YLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTL 254
Query: 211 LGALSACSQL--GALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
L L AC +L G+ EI HG+ + + A + MY +CG V + +F+
Sbjct: 255 LSVLPACVELNYGSSLVKEI-HGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFET- 312
Query: 269 SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG 328
S + ++ W++MI +A GD + ++LL+QM +G+ ++V+ LA + AC ++ L+
Sbjct: 313 SKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFA 372
Query: 329 VRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKT 388
+ + ++ +++D+ + G + A + + D+V W S++ A
Sbjct: 373 STVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE-KDLVSWSSMINAYGL 431
Query: 389 YGN 391
+G+
Sbjct: 432 HGH 434
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 10/285 (3%)
Query: 113 LKGCA-RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD 171
+K CA + F Q+H L+ G D YAK A +KVFDEM RD
Sbjct: 53 IKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRD 112
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG-ALKQGEIVH 230
S+ ++I+ Q EA+ L K M G+ P V L+ C+++G + K + H
Sbjct: 113 TVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFH 172
Query: 231 GYI-VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
+ VDE++ +V++ A++DMY K A+ VF M K+ ++W MI N +
Sbjct: 173 ALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQME-VKNEVSWTAMISGCVANQN 231
Query: 290 GYKALDLLDQMALDGVHPDAVSYLAALCAC---NHAGLVEEGVRLFDLMKGSVVKPNMKH 346
+DL M + + P+ V+ L+ L AC N+ + + + F G +
Sbjct: 232 YEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLT- 290
Query: 347 YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGN 391
+ + + R G + + + + DVV+W S++ G+
Sbjct: 291 -AAFMTMYCRCGNVSLS-RVLFETSKVRDVVMWSSMISGYAETGD 333
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 215/418 (51%), Gaps = 8/418 (1%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S D+ A ++F + WN++L G + + +A+ + + + +VD +T
Sbjct: 273 SKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVV 332
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
L+ C IH ++R G+++ Y +D A V D M +
Sbjct: 333 SLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYK 392
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
D+ S + MISGLA R +EAI++F M++ PN +TV+ L+ACS L+ + H
Sbjct: 393 DVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAH 449
Query: 231 GYIVDEKLDMNVI-VCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
G + L +N I V +++D Y+KCG ++ A F ++ K++I+W +I A+A+NG
Sbjct: 450 GIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT-EKNIISWTVIISAYAINGL 508
Query: 290 GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGS 349
KAL L D+M G P+AV+YLAAL ACNH GLV++G+ +F M KP+++HY
Sbjct: 509 PDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSC 568
Query: 350 VVDLLGRAGRIKEAYDTINSMP--MLPDVVLWQSLL-GASKTYGNVEMAEMASRKLVEMG 406
+VD+L RAG I A + I ++P + W ++L G + + + +++E+
Sbjct: 569 IVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELE 628
Query: 407 SNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQ 464
++L S+ +AA + W DV +R + + VR V G+S +F+ GD+
Sbjct: 629 PLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDK 686
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 161/357 (45%), Gaps = 29/357 (8%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRS-VSRSPQKVD 105
LC + + LS A ++F + W+ V+R S +P + ++ V + + D
Sbjct: 167 LCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPD 225
Query: 106 ALTCSFALKGCARALTFSEATQIHSQVLRFGFD-AXXXXXXXXXXXYAKTGDLDAAQKVF 164
+T + LK C +H +R GFD A Y+K D+D+A +VF
Sbjct: 226 CVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVF 285
Query: 165 DEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALK 224
DE R+I SWN++++G R +EA+ +F M +E ++VTV+ L C
Sbjct: 286 DETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPL 345
Query: 225 QGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAF 284
+ +HG I+ + N + +++ID Y+ C VD A +V +M+ K +++ +TMI
Sbjct: 346 PCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT-YKDVVSCSTMISGL 404
Query: 285 AMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN-----------HAGLVEEGVRLFD 333
A G +A+ + M P+A++ ++ L AC+ H + + + D
Sbjct: 405 AHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIND 461
Query: 334 LMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ G+ S+VD + G I+ A T + + +++ W ++ A G
Sbjct: 462 ISVGT----------SIVDAYAKCGAIEMARRTFDQITE-KNIISWTVIISAYAING 507
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 9/238 (3%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y K GDL + + FD M RD SWN ++ GL E + F +++ G+ PN T+
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+ + AC L GE +HGY++ V N+++ MY+ + A +F MS
Sbjct: 131 VLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMS- 186
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEG- 328
+ +I+W+ +I ++ + + L L +M + PD V+ + L AC ++ G
Sbjct: 187 ERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGR 246
Query: 329 -VRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
V F + +G + ++ S++D+ + + A+ + ++V W S+L
Sbjct: 247 SVHGFSIRRGFDL-ADVFVCNSLIDMYSKGFDVDSAFRVFDE-TTCRNIVSWNSILAG 302
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 187/330 (56%), Gaps = 7/330 (2%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWR-PNDVT 209
Y K + + A +F MP+R + +WNA+I G +Q R EA+ F M EG PN+ T
Sbjct: 169 YLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNEST 228
Query: 210 VLGALSACSQLGALKQGEIVHGYIVD-EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
A++A S + + G+ +H + NV V N++I YSKCG ++ + F +
Sbjct: 229 FPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKL 288
Query: 269 SCT-KSLITWNTMIMAFAMNGDGYKALDLLDQMALD-GVHPDAVSYLAALCACNHAGLVE 326
+++++WN+MI +A NG G +A+ + ++M D + P+ V+ L L ACNHAGL++
Sbjct: 289 EEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQ 348
Query: 327 EGVRLFDLMKGSVVKPNM---KHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
EG F+ PN+ +HY +VD+L R+GR KEA + I SMP+ P + W++LL
Sbjct: 349 EGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALL 408
Query: 384 GASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRK 443
G + + N +A++A+ K++E+ +V+LSN Y+A + W +V +R M +++
Sbjct: 409 GGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKR 468
Query: 444 VPGFSYTEIDCKIHKFINGDQSHPNWKEIY 473
G S+ E+ +I F+N D+++ E+Y
Sbjct: 469 FTGCSWIEVRDQIRVFVNADKNNELKDEVY 498
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 8/231 (3%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKV-DALTCSFALKGCA 117
A +FR + S WNAV+ G + + + +A++ + + R + + T A+ +
Sbjct: 178 ALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAIS 237
Query: 118 RALTFSEATQIHSQVLRF-GFDAXXXXXXXXXXXYAKTGDLDAAQKVFD--EMPKRDIAS 174
+ IH+ ++F G Y+K G+++ + F+ E +R+I S
Sbjct: 238 NIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVS 297
Query: 175 WNAMISGLAQGSRPNEAIALFKRM-KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
WN+MI G A R EA+A+F++M K+ RPN+VT+LG L AC+ G +++G +
Sbjct: 298 WNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKA 357
Query: 234 VDEKLDMNVIVCN---AVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
V++ D N++ ++DM S+ G +A + ++M + W ++
Sbjct: 358 VNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALL 408
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 12/255 (4%)
Query: 160 AQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQ 219
A KVFDE+P+ D+ S A+I + SR EA FKR+ G RPN+ T + + +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 220 LGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNT 279
+K G+ +H Y + L NV V +AV++ Y K + A F + ++++
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR-DPNVVSITN 164
Query: 280 MIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF-DLMKGS 338
+I + + +AL L M V V++ A + + G EE V F D+++
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 339 VVKPNMKHYGSVVDLLGR-----AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVE 393
VV PN + + + AG+ A I + +V +W SL+ GN+E
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHAC-AIKFLGKRFNVFVWNSLISFYSKCGNME 279
Query: 394 MAEMASRKLVEMGSN 408
+ +A KL E N
Sbjct: 280 DSLLAFNKLEEEQRN 294
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 199/394 (50%), Gaps = 7/394 (1%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA 106
+CA S L A +++ + S +++ A A+ ++ + K+DA
Sbjct: 288 VCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDA 347
Query: 107 LTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE 166
+ L GC ++ +H ++ G Y+K D++ +F++
Sbjct: 348 VALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQ 407
Query: 167 MPKRDIASWNAMISGLAQGSRPNEAIALFKRMK-EEGWRPNDVTVLGALSACSQLGALKQ 225
+ + + SWN++ISG Q R + A +F +M G P+ +T+ L+ CSQL L
Sbjct: 408 LQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNL 467
Query: 226 GEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS--CTKSLITWNTMIMA 283
G+ +HGY + + VC A+IDMY+KCG +A SVF+++ CT TWN+MI
Sbjct: 468 GKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA---TWNSMISG 524
Query: 284 FAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKP 342
++++G ++AL +M G+ PD +++L L ACNH G V+EG F M K + P
Sbjct: 525 YSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISP 584
Query: 343 NMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKL 402
++HY +V LLGRA EA I M + PD +W +LL A + +E+ E +RK+
Sbjct: 585 TLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKM 644
Query: 403 VEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAM 436
+ + G +VL+SN+YA W DV RVR M
Sbjct: 645 FMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMM 678
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 8/261 (3%)
Query: 65 RIQNPST-----NDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARA 119
RI P T + ++++L+ + I+ +R + RS + T S L+ +
Sbjct: 2 RITKPITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTS 61
Query: 120 L-TFS-EATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
+F + Q+ + + + G D Y K G + +AQ +FDEMP+RD WNA
Sbjct: 62 FNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA 121
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+I G ++ +A LF M ++G+ P+ T++ L C Q G + QG VHG
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
L+++ V NA+I YSKC + A +F+ M KS ++WNTMI A++ +G +A+ +
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGAYSQSGLQEEAITVF 240
Query: 298 DQMALDGVHPDAVSYLAALCA 318
M V V+ + L A
Sbjct: 241 KNMFEKNVEISPVTIINLLSA 261
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 133/312 (42%), Gaps = 9/312 (2%)
Query: 20 IHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLR 79
+ ++Q+Q HL +G F +T LL L ++ A +F + T WNA++
Sbjct: 67 LQVEQVQTHLTKSGLDRFVYVKTSLLNL--YLKKGCVTSAQMLFDEMPERDTVVWNALIC 124
Query: 80 GLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDA 139
G + + A + + + A T L C + S+ +H + G +
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL 184
Query: 140 XXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMK 199
Y+K +L +A+ +F EM + SWN MI +Q EAI +FK M
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 200 EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVD 259
E+ + VT++ LS A E +H +V + ++ V +++ YS+CG +
Sbjct: 245 EKNVEISPVTIINLLS------AHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 260 KAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
A ++ + S++ +++ +A GD A+ + + DAV+ + L C
Sbjct: 299 SAERLYASAK-QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGC 357
Query: 320 NHAGLVEEGVRL 331
+ ++ G+ L
Sbjct: 358 KKSSHIDIGMSL 369
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 4/237 (1%)
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSA-CSQLGALK-QGE 227
RD++ +++++ G + I +F+ + PN T+ L A + + K Q E
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
V ++ LD V V +++++Y K G V A +F M + + WN +I ++ N
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMP-ERDTVVWNALICGYSRN 129
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY 347
G A L M G P A + + L C G V +G + + S ++ + +
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE 404
+++ + + A M V W +++GA G E A + + E
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKD-KSTVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 193/365 (52%), Gaps = 15/365 (4%)
Query: 217 CSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLIT 276
C + L++ + VHG I +++ + +++MYS CG ++A SVF+ MS K+L T
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS-EKNLET 322
Query: 277 WNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM- 335
W +I FA NG G A+D+ + +G PD + AC G V+EG+ F+ M
Sbjct: 323 WCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMS 382
Query: 336 KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ + P+++ Y S+V++ G + EA + + MPM P+V +W++L+ S+ +GN+E+
Sbjct: 383 RDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELG 442
Query: 396 EMASRKLVEMGSNSCGDFV-LLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDC 454
+ C + V L +Q V+ + + K+ K +
Sbjct: 443 DY------------CAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKKRSGILHGVKS 490
Query: 455 KIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEK 514
+ +F GD + P E++ + +K + GY A+T + LHDI +E K+ L HSE+
Sbjct: 491 SMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSER 550
Query: 515 LAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCS 574
+A A ++++ P VIKNLR+C DCH +KI+S+I RE+I RD RF + K G C+
Sbjct: 551 IAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACT 610
Query: 575 CGDYW 579
C DYW
Sbjct: 611 CKDYW 615
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 3/178 (1%)
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
K C A EA +H ++ Y+ G + A VF++M ++++
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
+W +I A+ +AI +F R KEEG P+ G AC LG + +G ++H
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHFES 380
Query: 234 VDEKLDMNVIVCNAV--IDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
+ + + + V ++MY+ GF+D+A + M ++ W T++ ++G+
Sbjct: 381 MSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGN 438
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 202/413 (48%), Gaps = 2/413 (0%)
Query: 62 IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT 121
+F + W +++ Q +A+ + + S + T + CA
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISG 181
Q+H VL G + Y+ G+L +A +F M RDI SW+ +I G
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 182 LAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMN 241
Q E F M++ G +P D + LS + ++ G VH + L+ N
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQN 445
Query: 242 VIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
V +++I+MYSKCG + +A +F +++ MI +A +G +A+DL ++
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETD-RDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 504
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRI 360
G PD+V++++ L AC H+G ++ G F++M+ + ++P +HYG +VDLL RAGR+
Sbjct: 505 KVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRL 564
Query: 361 KEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVY 420
+A IN M D V+W +LL A K G++E A+ +++E+ V L+N+Y
Sbjct: 565 SDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIY 624
Query: 421 AARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIY 473
++ + VR+ M K V K PG+S +I + F++GD+ HP ++IY
Sbjct: 625 SSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIY 677
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 144/305 (47%), Gaps = 1/305 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
+ ++F + + W A++ GL + + + ++++ +SRS + D T + ALK CA
Sbjct: 162 SCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAG 221
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
IH+ V+ GF Y + G++ +F+ M +RD+ SW ++
Sbjct: 222 LRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSL 281
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
I + + +A+ F +M+ PN+ T SAC+ L L GE +H ++ L
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL 341
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
+ ++ V N+++ MYS CG + A +FQ M C + +I+W+T+I + G G +
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRC-RDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
M G P + + L + ++E G ++ L ++ N S++++ + G
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCG 460
Query: 359 RIKEA 363
IKEA
Sbjct: 461 SIKEA 465
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 149/335 (44%), Gaps = 4/335 (1%)
Query: 53 AADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKV--DALTCS 110
A +L A Q+F ++ + W ++++ + +A+ + ++ V D S
Sbjct: 53 AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
LK C ++ + +H+ ++ + Y + G +D + +VF EMP R
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
+ +W A+I+GL R E + F M + T AL AC+ L +K G+ +H
Sbjct: 173 NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
+++ + V N++ MY++CG + +F+NMS + +++W ++I+A+ G
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIGQE 291
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV 350
KA++ +M V P+ ++ + AC + G +L + + ++ S+
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351
Query: 351 VDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+ + G + A M D++ W +++G
Sbjct: 352 MKMYSTCGNLVSASVLFQGMR-CRDIISWSTIIGG 385
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 21/306 (6%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S +L A+ +F+ ++ W+ ++ G + + ++ + +S K +
Sbjct: 356 STCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALA 415
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
L Q+H+ L FG + Y+K G + A +F E +
Sbjct: 416 SLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRD 475
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
DI S AMI+G A+ + EAI LF++ + G+RP+ VT + L+AC+ G L G H
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG--FH 533
Query: 231 GY-IVDEKLDMNVIV--CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
+ ++ E +M ++D+ + G + A + MS K + W T+++A
Sbjct: 534 YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 288 GD---GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNM 344
GD G +A + + + LD A+ LA + + G +EE V+ NM
Sbjct: 594 GDIERGRRAAERI--LELDPTCATALVTLANIYS--STGNLEEAAN---------VRKNM 640
Query: 345 KHYGSV 350
K G +
Sbjct: 641 KAKGVI 646
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 199/401 (49%), Gaps = 5/401 (1%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
D+S A ++F + W A++ G + +A+S ++ + K + +T + L
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL 350
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
GC +H ++ G YAK A+ VF+ ++DI
Sbjct: 351 SGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIV 409
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
+WN++ISG +Q +EA+ LF RM E PN VTV SAC+ LG+L G +H Y
Sbjct: 410 AWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYS 469
Query: 234 VDEKL--DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGY 291
V +V V A++D Y+KCG A +F + K+ ITW+ MI + GD
Sbjct: 470 VKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGGYGKQGDTI 528
Query: 292 KALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSV 350
+L+L ++M P+ ++ + L AC H G+V EG + F M K P+ KHY +
Sbjct: 529 GSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 588
Query: 351 VDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSC 410
VD+L RAG +++A D I MP+ PDV + + L + ++ E+ +K++++ +
Sbjct: 589 VDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDA 648
Query: 411 GDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTE 451
+VL+SN+YA+ RW+ K VR M + + K+ G S E
Sbjct: 649 SYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 160/339 (47%), Gaps = 8/339 (2%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F +I P W +LR ++ + + + Y + + + D + S ALK C
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 119 ALTFSEATQIHSQVLRF-GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
+IH Q+++ FD YAK G++ +A KVF+++ R++ W +
Sbjct: 155 LQDLDNGKKIHCQLVKVPSFD--NVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTS 212
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
MI+G + E + LF RM+E N+ T + AC++L AL QG+ HG +V
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
++++ + +++DMY KCG + A VF S L+ W MI+ + NG +AL L
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV-DLVMWTAMIVGYTHNGSVNEALSLF 331
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDL-MKGSVVKPNMKHYGSVVDLLGR 356
+M + P+ V+ + L C +E G + L +K + N+ + ++V + +
Sbjct: 332 QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVAN--ALVHMYAK 389
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ ++A + M D+V W S++ G++ A
Sbjct: 390 CYQNRDA-KYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 175/389 (44%), Gaps = 20/389 (5%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
K++ L+ F + T LL++ A ++ A ++F I + W +++ G
Sbjct: 162 KKIHCQLVKVPSFD-NVVLTGLLDMYA--KCGEIKSAHKVFNDITLRNVVCWTSMIAGYV 218
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
+ + + + + + + T + C + + H +++ G +
Sbjct: 219 KNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
Y K GD+ A++VF+E D+ W AMI G NEA++LF++MK
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL-DMNVIVCNAVIDMYSKCGFVDKA 261
+PN VT+ LS C + L+ G VHG + + D N V NA++ MY+KC A
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDA 396
Query: 262 YSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
VF+ M K ++ WN++I F+ NG ++AL L +M + V P+ V+ + AC
Sbjct: 397 KYVFE-MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACAS 455
Query: 322 AGLVEEGVRL--FDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA---YDTINSMPMLPDV 376
G + G L + + G + ++ +++D + G + A +DTI +
Sbjct: 456 LGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE----KNT 511
Query: 377 VLWQSLLGA----SKTYGNVEMAEMASRK 401
+ W +++G T G++E+ E +K
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 124/260 (47%), Gaps = 5/260 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y G A+ VFD++P+ D W M+ E + L+ + + G+R +D+
Sbjct: 86 YGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVF 145
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
AL AC++L L G+ +H +V NV++ ++DMY+KCG + A+ VF +++
Sbjct: 146 SKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDIT- 203
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
++++ W +MI + N + L L ++M + V + +Y + AC + +G
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKW 263
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ S ++ + S++D+ + G I A N + D+V+W +++ G
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV-DLVMWTAMIVGYTHNG 322
Query: 391 NVEMAEMASRKL--VEMGSN 408
+V A +K+ VE+ N
Sbjct: 323 SVNEALSLFQKMKGVEIKPN 342
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 216/402 (53%), Gaps = 13/402 (3%)
Query: 42 TKLLELCAISPAADLSFAAQIFRRI--QNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSR 99
+KL+ L A A++ A ++F R+ ++ S WN+++ G A Q A++ Y ++
Sbjct: 131 SKLVRLYASCGYAEV--AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE 188
Query: 100 SPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDA 159
K D T LK C + IH +++ GF YAK GD+
Sbjct: 189 DGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVK 248
Query: 160 AQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQ 219
A+ VFD +P +D SWN+M++G +EA+ +F+ M + G P+ V + L ++
Sbjct: 249 ARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---AR 305
Query: 220 LGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNT 279
+ + K G +HG+++ ++ + V NA+I +YSK G + +A +F M + ++WN
Sbjct: 306 VLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM-LERDTVSWNA 364
Query: 280 MIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGS 338
+I A + N +G K +QM PD +++++ L C + G+VE+G RLF LM K
Sbjct: 365 IISAHSKNSNGLK---YFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEY 421
Query: 339 VVKPNMKHYGSVVDLLGRAGRIKEAYDTI-NSMPMLPDVVLWQSLLGASKTYGNVEMAEM 397
+ P M+HY +V+L GRAG ++EAY I M + +W +LL A +GN ++ E+
Sbjct: 422 GIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEV 481
Query: 398 ASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITK 439
A+++L E+ ++ +F LL +Y+ +R DV+RVR+ M+ +
Sbjct: 482 AAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDR 523
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 210/402 (52%), Gaps = 9/402 (2%)
Query: 56 LSFAAQIFRRI-QNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
+S A ++F + Q+ ++ ++ G + A+ +R + +S V+ T L
Sbjct: 176 ISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLS 235
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
+ S A H ++ G D Y KTG + +A+++FD ++D+ +
Sbjct: 236 AISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVT 295
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
WN MI A+ E + L ++MK E +PN T +G LS+C+ A G V +
Sbjct: 296 WNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLE 355
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
+E++ ++ I+ A++DMY+K G ++KA +F M K + +W MI + +G +A+
Sbjct: 356 EERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSWTAMISGYGAHGLAREAV 414
Query: 295 DLLDQMALDG--VHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVV 351
L ++M + V P+ +++L L AC+H GLV EG+R F M + P ++HYG VV
Sbjct: 415 TLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVV 474
Query: 352 DLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCG 411
DLLGRAG+++EAY+ I ++P+ D W++LL A + YGN ++ E +L EMG
Sbjct: 475 DLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPA 534
Query: 412 DFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEID 453
D +LL+ +A + ++ + + K RK G+S EI+
Sbjct: 535 DAILLAGTHAVAG---NPEKSLDNELNKG-RKEAGYSAIEIE 572
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 184/376 (48%), Gaps = 6/376 (1%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWN 75
C + + ++ +++ TG + +KLL A S D+ +A+ IF + N + +N
Sbjct: 38 CRDTVEVSRIHGYMVKTGLDKDDFAVSKLL---AFSSVLDIRYASSIFEHVSNTNLFMFN 94
Query: 76 AVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRF 135
++RG ++S +P +A S + + +D + LK C+R L S +H LR
Sbjct: 95 TMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRS 154
Query: 136 GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR-DIASWNAMISGLAQGSRPNEAIAL 194
GF Y G + A+KVFDEMP+ D +++ +++G Q S+ A+ L
Sbjct: 155 GFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDL 214
Query: 195 FKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSK 254
F+ M++ N T+L LSA S LG L E H + LD+++ + A+I MY K
Sbjct: 215 FRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGK 274
Query: 255 CGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLA 314
G + A +F + + K ++TWN MI +A G + + LL QM + + P++ +++
Sbjct: 275 TGGISSARRIF-DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG 333
Query: 315 ALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLP 374
L +C ++ G + DL++ + + ++VD+ + G +++A + N M
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKD-K 392
Query: 375 DVVLWQSLLGASKTYG 390
DV W +++ +G
Sbjct: 393 DVKSWTAMISGYGAHG 408
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 209/417 (50%), Gaps = 7/417 (1%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQ---NPSTNDWNAVLR 79
KQL ++ +G + + L+++ S L +AA +F + + N S WN++L
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDM--YSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 80 GLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDA 139
G ++ + A+ + +S D+ T S ALK C + Q+HS V+ G++
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 140 XXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMK 199
+A G++ A K+F +P +DI +++ +I G + + A LF+ +
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 200 EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVD 259
+ G + V L CS L +L G+ +HG + + + + A++DMY KCG +D
Sbjct: 436 KLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEID 495
Query: 260 KAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
+F M + +++W +I+ F NG +A +M G+ P+ V++L L AC
Sbjct: 496 NGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC 554
Query: 320 NHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVL 378
H+GL+EE + MK ++P ++HY VVDLLG+AG +EA + IN MP+ PD +
Sbjct: 555 RHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTI 614
Query: 379 WQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREA 435
W SLL A T+ N + + + KL++ + + LSN YA W + +VREA
Sbjct: 615 WTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREA 671
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 36/306 (11%)
Query: 112 ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD 171
L+ C + F I + V++ G Y L A KVFDEM +R+
Sbjct: 11 GLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERN 70
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKE-EGWRPNDVTVLGALSACSQLGALKQGEIVH 230
I +W M+SG +PN+AI L++RM + E N+ L AC +G ++ G +V+
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 231 GYIVDEKLDMNVIVCNAVIDM-------------------------------YSKCGFVD 259
I E L +V++ N+V+DM Y K G +D
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 260 KAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
+A ++F M ++++WN +I F G +AL+ L +M +G+ D + L AC
Sbjct: 191 EAVTLFHRMP-QPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKAC 248
Query: 320 NHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINS--MPMLPDVV 377
+ GL+ G +L + S ++ + +++D+ G + A D + + + V
Sbjct: 249 SFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVA 308
Query: 378 LWQSLL 383
+W S+L
Sbjct: 309 VWNSML 314
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 184/438 (42%), Gaps = 54/438 (12%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAAD---LSFAAQIFRRIQNPSTNDWNAVLR 79
+ +QAH+I G S+ + IS D LS A ++F + + W ++
Sbjct: 25 ESIQAHVIKQG-----ISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVS 79
Query: 80 GLAMSPQPTQAISWYRSVSRSPQK-VDALTCSFALKGCARA-------LTFS-------- 123
G +P +AI YR + S ++ + S LK C L +
Sbjct: 80 GYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLR 139
Query: 124 --------------------EATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKV 163
EA ++LR Y K G +D A +
Sbjct: 140 GDVVLMNSVVDMYVKNGRLIEANSSFKEILR----PSSTSWNTLISGYCKAGLMDEAVTL 195
Query: 164 FDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGAL 223
F MP+ ++ SWN +ISG P A+ RM+ EG + + L ACS G L
Sbjct: 196 FHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 224 KQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVF--QNMSCTKSLITWNTMI 281
G+ +H +V L+ + +A+IDMYS CG + A VF + ++ S+ WN+M+
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 282 MAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVK 341
F +N + AL LL Q+ + D+ + AL C + + G+++ L+ S +
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE 374
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRK 401
+ +VDL G I++A+ + +P D++ + L+ G +A R+
Sbjct: 375 LDYIVGSILVDLHANVGNIQDAHKLFHRLPN-KDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 402 LVEMGSNSCGDFVLLSNV 419
L+++G ++ D ++SN+
Sbjct: 434 LIKLGLDA--DQFIVSNI 449
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 145/353 (41%), Gaps = 10/353 (2%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A +F R+ P+ WN ++ G P +A+ + + R +D LK C+
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP---KRDIASW 175
+ Q+H V++ G ++ Y+ G L A VF + +A W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
N+M+SG A+ L ++ + + T+ GAL C L+ G VH +V
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVV 370
Query: 236 EKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALD 295
+++ IV + ++D+++ G + A+ +F + K +I ++ +I +G A
Sbjct: 371 SGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFY 429
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDL--MKGSVVKPNMKHYGSVVDL 353
L ++ G+ D L C+ + G ++ L KG +P ++VD+
Sbjct: 430 LFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT--ALVDM 487
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ G I + M + DVV W ++ G VE A K++ +G
Sbjct: 488 YVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG 539
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 223/425 (52%), Gaps = 34/425 (8%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALT-----CS 110
+ A + F I +T WN++L G S + +A R + P+K DA++ S
Sbjct: 155 IELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA---RRVFDKIPEK-DAVSWNLIISS 210
Query: 111 FALKG-CARALTFSEATQIHS-----------------QVLRFGFDAXXXXX----XXXX 148
+A KG A + A + S ++ R FDA
Sbjct: 211 YAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMI 270
Query: 149 XXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG--WRPN 206
Y K GD+ +A+++F M K+D ++AMI+ Q +P +A+ LF +M E +P+
Sbjct: 271 SGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPD 330
Query: 207 DVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ 266
++T+ +SA SQLG G V YI + + ++ ++ ++ID+Y K G KA+ +F
Sbjct: 331 EITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFS 390
Query: 267 NMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVE 326
N++ K ++++ MIM +NG +A L M + P+ V++ L A +H+GLV+
Sbjct: 391 NLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQ 449
Query: 327 EGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGAS 386
EG + F+ MK ++P+ HYG +VD+LGRAGR++EAY+ I SMPM P+ +W +LL AS
Sbjct: 450 EGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLAS 509
Query: 387 KTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPG 446
+ NVE E+A V++ ++ G L+ +Y++ RW D + VR+++ K + K G
Sbjct: 510 GLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLG 569
Query: 447 FSYTE 451
S+ E
Sbjct: 570 CSWVE 574
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/439 (20%), Positives = 169/439 (38%), Gaps = 61/439 (13%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRT-KLLELCAISPAADLSFAAQIFRRIQNPSTND 73
RC L KQ+ A L+ H P + L +++ +I + +
Sbjct: 12 RCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFS 71
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
W ++R L+ + + + Y + S + + L+ C + + IH+Q L
Sbjct: 72 WGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQAL 131
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ G Y++ G ++ A+K FD++ +++ SWN+++ G + +EA
Sbjct: 132 KNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARR 191
Query: 194 LFKRMKEEGWRPNDVTVLGAL------SACSQLGALKQGE------IVHGYI-------- 233
+F ++ E+ ++ + +ACS A+ ++ GY+
Sbjct: 192 VFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLA 251
Query: 234 ---VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
D N + +I Y+K G V A +F+ MS K + ++ MI + NG
Sbjct: 252 RTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMS-KKDKLVYDAMIACYTQNGKP 310
Query: 291 YKALDLLDQMALDG--VHPDAVSYLAALCACNHAG-----------LVEEGVRLFDLMKG 337
AL L QM + PD ++ + + A + G + E G+++ DL+
Sbjct: 311 KDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLST 370
Query: 338 SVVKPNMK--------------------HYGSVVDLLGRAGRIKEAYDTINSM---PMLP 374
S++ MK Y +++ G G EA +M + P
Sbjct: 371 SLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPP 430
Query: 375 DVVLWQSLLGASKTYGNVE 393
+VV + LL A G V+
Sbjct: 431 NVVTFTGLLSAYSHSGLVQ 449
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 193/386 (50%), Gaps = 41/386 (10%)
Query: 200 EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVD 259
++G P+ + +C+ L +L+ + VH + + K + + N VI M+ +C +
Sbjct: 229 DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSIT 288
Query: 260 KAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
A VF +M K + +W+ M+ A++ NG G AL L ++M G+ P+ ++L AC
Sbjct: 289 DAKRVFDHM-VDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLAC 347
Query: 320 NHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVL 378
G +EE FD MK + P +HY V+ +LG+ G + EA I +P P
Sbjct: 348 ATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADF 407
Query: 379 WQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMIT 438
W+++ ++ +G++++ + +V++ + +A+I
Sbjct: 408 WEAMRNYARLHGDIDLEDYMEELMVDVDPS-------------------------KAVIN 442
Query: 439 KDVRKVPGFSYTEID-----CKIHKFINGDQSHPNWKEIYAKMDEIKFRIKAYGYTAKTD 493
K + P S+ E + +I +F N KE+ AK K Y T
Sbjct: 443 K-IPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAK--------KGVVYVPDTR 493
Query: 494 LVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTVIKIISNIY 553
VLHDI +E K+ AL YHSE+LA+AYG+I T + +IKNLR+CGDCH IKI+S I
Sbjct: 494 FVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKII 553
Query: 554 NREIIVRDRARFGRFKGGVCSCGDYW 579
R +IVRD RF FK G CSCGDYW
Sbjct: 554 GRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 5/189 (2%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
+ CA + + ++H L+ F + + + A++VFD M +D+
Sbjct: 243 FESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDM 302
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
SW+ M+ + ++A+ LF+ M + G +PN+ T L AC+ +G +++ +
Sbjct: 303 DSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDS 362
Query: 233 IVDEK-LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGY 291
+ +E + V+ + KCG + +A +++ + W M ++GD
Sbjct: 363 MKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGD-- 420
Query: 292 KALDLLDQM 300
+DL D M
Sbjct: 421 --IDLEDYM 427
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 164/262 (62%), Gaps = 2/262 (0%)
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
K D+ SW ++ISGL + +A FK+M G PN T++ L AC+ L +K G+
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKE 309
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG 288
+HGY V L+ + V +A++DMY KCGF+ +A +F+ + K+ +T+N+MI +A +G
Sbjct: 310 IHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRK-TPKKTTVTFNSMIFCYANHG 368
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHY 347
KA++L DQM G D +++ A L AC+HAGL + G LF LM+ + P ++HY
Sbjct: 369 LADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHY 428
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS 407
+VDLLGRAG++ EAY+ I +M M PD+ +W +LL A + +GN+E+A +A++ L E+
Sbjct: 429 ACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEP 488
Query: 408 NSCGDFVLLSNVYAARQRWHDV 429
+ G+ +LL+++YA W V
Sbjct: 489 ENSGNGLLLTSLYANAGSWESV 510
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 131/275 (47%), Gaps = 4/275 (1%)
Query: 117 ARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWN 176
R F +H+ ++ G Y + G + A+KVFDEMPKRDI+
Sbjct: 27 GRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCV 86
Query: 177 AMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDE 236
MI A+ E++ F+ M ++G + + V L A L + G+++H ++
Sbjct: 87 VMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDL 296
+ + + +++IDMYSK G V A VF ++ + L+ +N MI +A N +AL+L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMISGYANNSQADEALNL 205
Query: 297 LDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGR 356
+ M L G+ PD +++ A + +H E+ + +LM KP++ + S++ L
Sbjct: 206 VKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVH 265
Query: 357 AGRIKEAYDTINSM---PMLPDVVLWQSLLGASKT 388
+ ++A+D M + P+ +LL A T
Sbjct: 266 NFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT 300
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 145/356 (40%), Gaps = 48/356 (13%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
+ L AHL+T+G KL+ + A ++F + + ++ A
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYV--ECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
+ +++ ++R + + K+DA LK L IH VL+F +++
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
Y+K G++ A+KVF ++ ++D+ +NAMISG A S+ +EA+ L K MK G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
+P +VI NA+I +S +K
Sbjct: 214 IKP-----------------------------------DVITWNALISGFSHMRNEEKVS 238
Query: 263 SVFQNMSC---TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
+ + M +++W ++I N KA D QM G++P++ + + L AC
Sbjct: 239 EILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Query: 320 NHAGLVEEGVRLFDLMKGSVVKPNMKHYG----SVVDLLGRAGRIKEAYDTINSMP 371
++ G + G V ++ +G +++D+ G+ G I EA P
Sbjct: 299 TTLAYMKHGKEI----HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 93/226 (41%), Gaps = 9/226 (3%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P W +++ GL + Q +A ++ + ++ T L C +I
Sbjct: 251 PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRP 188
H + G + Y K G + A +F + PK+ ++N+MI A
Sbjct: 311 HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLA 370
Query: 189 NEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE-----IVHGYIVDEKLDMNVI 243
++A+ LF +M+ G + + +T L+ACS G G+ + + Y + +L+
Sbjct: 371 DKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYA- 429
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
++D+ + G + +AY + + M L W ++ A +G+
Sbjct: 430 ---CMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGN 472
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 184/328 (56%), Gaps = 9/328 (2%)
Query: 153 KTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDV 208
+ G +D A+ +F +M ++ SW M++G+ Q EAI ++M+E G RPN
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547
Query: 209 TVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVI-VCNAVIDMYSKCGFVDKAYSVFQN 267
++ ALSAC+ L +L G +HGYI+ +++ + +++DMY+KCG ++KA VF +
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Query: 268 MSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEE 327
L N MI A+A+ G+ +A+ L + G+ PD ++ L ACNHAG + +
Sbjct: 608 -KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQ 666
Query: 328 GVRLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGAS 386
+ +F D++ +KP ++HYG +VDLL AG ++A I MP PD + QSL+ +
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASC 726
Query: 387 KTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPG 446
E+ + SRKL+E + G++V +SN YA W +V ++RE M K ++K PG
Sbjct: 727 NKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 786
Query: 447 FSYTEIDCK--IHKFINGDQSHPNWKEI 472
S+ +I + +H F+ D++H EI
Sbjct: 787 CSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 157/305 (51%), Gaps = 1/305 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A+++F I + + WNA++ G + + +AI + + + + +T S L A
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
E Q H+ + G + Y K G ++ A+ VFD M ++D+ +WN +
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLI 346
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
ISG Q +AI + + M+ E + + VT+ +SA ++ LK G+ V Y +
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
+ ++++ + V+DMY+KCG + A VF + + K LI WNT++ A+A +G +AL L
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
M L+GV P+ +++ + + G V+E +F M+ S + PN+ + ++++ + + G
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 359 RIKEA 363
+EA
Sbjct: 526 CSEEA 530
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 175/375 (46%), Gaps = 16/375 (4%)
Query: 23 KQLQAHLITTGKFHFHPS--RTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRG 80
KQ+ A ++ G F+ TKL+ A A L A +F +++ + W A++
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDA--LEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 81 LAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQ-IHSQVLRFGFDA 139
A+ + + + D K C AL +S + +H V++ G +
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACG-ALKWSRFGRGVHGYVVKSGLED 206
Query: 140 XXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMK 199
Y K G LD A KVFDE+P R+ +WNA++ G Q + EAI LF M+
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMR 266
Query: 200 EEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVD 259
++G P VTV LSA + +G +++G+ H + ++++ I+ ++++ Y K G ++
Sbjct: 267 KQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIE 326
Query: 260 KAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
A VF M K ++TWN +I + G A+ + M L+ + D V+ LA L +
Sbjct: 327 YAEMVFDRM-FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVT-LATLMS- 383
Query: 320 NHAGLVEEGVRLFDLMKGSVVKPNMKH----YGSVVDLLGRAGRIKEAYDTINSMPMLPD 375
A E ++L ++ ++ + + +V+D+ + G I +A +S + D
Sbjct: 384 --AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKD 440
Query: 376 VVLWQSLLGASKTYG 390
++LW +LL A G
Sbjct: 441 LILWNTLLAAYAESG 455
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 201/476 (42%), Gaps = 38/476 (7%)
Query: 67 QNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEAT 126
+PS+ + + L + + +A+S + ++ L+GC S
Sbjct: 31 HSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGK 90
Query: 127 QIHSQVLRFG--FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMIS---- 180
QIH+++L+ G + YAK L+ A+ +F ++ R++ SW A+I
Sbjct: 91 QIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCR 150
Query: 181 -GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLD 239
GL +G A+ F M E P++ V AC L + G VHGY+V L+
Sbjct: 151 IGLCEG-----ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 240 MNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQ 299
V V +++ DMY KCG +D A VF + ++ + WN +++ + NG +A+ L
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 300 MALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGR 359
M GV P V+ L A + G VEEG + + + ++ + S+++ + G
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 360 IKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA-EMASRKLVEMGSNSCGDFVLLSN 418
I+ A + M DVV W ++ G VE A M +E C V L+
Sbjct: 325 IEYAEMVFDRM-FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC---VTLAT 380
Query: 419 VYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDE 478
+ +A R ++K +E + C H F + ++YAK
Sbjct: 381 LMSAAARTENLKLGKE---------------VQCYCIRHSFESDIVLASTVMDMYAKCGS 425
Query: 479 IKFRIKAYGYTAKTDLVL-HDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVI 533
I K + T + DL+L + + ++ L+ E L + YG+ + G P VI
Sbjct: 426 IVDAKKVFDSTVEKDLILWNTLLAAYAESGLS--GEALRLFYGM--QLEGVPPNVI 477
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 132/292 (45%), Gaps = 13/292 (4%)
Query: 59 AAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
A +F ++Q+ P+ W ++ G+ + +AI + R + S + +A + + AL
Sbjct: 495 AKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALS 554
Query: 115 GCARALTFSEATQIHSQVLR-FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
CA + IH ++R + YAK GD++ A+KVF ++
Sbjct: 555 ACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELP 614
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-EIVHGY 232
NAMIS A EAIAL++ ++ G +P+++T+ LSAC+ G + Q EI
Sbjct: 615 LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDI 674
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
+ + + ++D+ + G +KA + + M MI + + + +
Sbjct: 675 VSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPD----ARMIQSLVASCNKQR 730
Query: 293 ALDLLDQMA---LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVK 341
+L+D ++ L+ ++ +Y+ A G +E V++ ++MK +K
Sbjct: 731 KTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLK 782
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/475 (26%), Positives = 220/475 (46%), Gaps = 38/475 (8%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA 106
L A A A +F + WN ++ G A + +S ++ + S K D
Sbjct: 145 LFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDC 204
Query: 107 LTCSFALKGC-ARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQK--- 162
T S + C A + +H+ +L+ G+ + Y K G D A +
Sbjct: 205 YTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELE 264
Query: 163 ----------------------------VFDEMPKRDIASWNAMISGLAQGSRPNEAIAL 194
VF P+++I +W MI+G + +A+
Sbjct: 265 SIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRF 324
Query: 195 FKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSK 254
F M + G + L ACS L L G+++HG ++ V NA++++Y+K
Sbjct: 325 FVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAK 384
Query: 255 CGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLA 314
CG + +A F +++ K L++WNTM+ AF ++G +AL L D M G+ PD V+++
Sbjct: 385 CGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIG 443
Query: 315 ALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPML 373
L C+H+GLVEEG +F+ M K + + H ++D+ GR G + EA D + L
Sbjct: 444 LLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSL 503
Query: 374 ----PDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDV 429
+ W++LLGA T+ + E+ S+ L + FVLLSN+Y + RW +
Sbjct: 504 VTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEG 563
Query: 430 KRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIK 484
+ VR M+ + ++K PG S+ E+ ++ F+ GD SHP +E+ ++ ++ ++
Sbjct: 564 EDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 114/205 (55%), Gaps = 11/205 (5%)
Query: 152 AKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVL 211
AK+G + +A++VFD MP+ D +WN M++ ++ EAIALF +++ +P+D +
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 212 GALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC- 270
LS C+ LG +K G + ++ ++ V N++IDMY KC A VF++M C
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 271 TKSLITWNTMIMAFAMNGDGYK-ALDLLDQMALDGVHPDAVSYLAALCACNHA--GLVEE 327
+++ +TW +++ A+ MN + ++ ALD+ +M P V++ + HA G +E
Sbjct: 135 SRNEVTWCSLLFAY-MNAEQFEAALDVFVEM------PKRVAFAWNIMISGHAHCGKLES 187
Query: 328 GVRLFDLMKGSVVKPNMKHYGSVVD 352
+ LF M S KP+ + S+++
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMN 212
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 240 MNVIV-CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLD 298
M+V+V + I +K G + A VF M + + WNTM+ +++ G +A+ L
Sbjct: 1 MSVLVRLTSKIASLAKSGRIASARQVFDGMPELDT-VAWNTMLTSYSRLGLHQEAIALFT 59
Query: 299 QMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
Q+ PD S+ A L C G V+ G ++ L+ S ++ S++D+ G+
Sbjct: 60 QLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCS 119
Query: 359 RIKEAYDTINSMPMLPDV-------VLWQSLLGASKTYGNVEMAEMASRKLVEM 405
DT+++ + D+ V W SLL A Y N E E A VEM
Sbjct: 120 ------DTLSANKVFRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEM 164
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 195/380 (51%), Gaps = 35/380 (9%)
Query: 104 VDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKV 163
+DA S ALK CA A +H+ ++ F + Y K + A+K+
Sbjct: 46 LDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKL 105
Query: 164 FDEMPKRDIASWNAMISGLAQGSR--------------PNE------------------- 190
FDE+P+R+ WNAMIS + PNE
Sbjct: 106 FDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR 165
Query: 191 AIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVID 250
AI +++M E ++PN +T+L +SACS +GA + + +H Y ++ + + + +++
Sbjct: 166 AIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVE 225
Query: 251 MYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAV 310
Y +CG + VF +M + ++ W+++I A+A++GD AL +M L V PD +
Sbjct: 226 AYGRCGSIVYVQLVFDSME-DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDI 284
Query: 311 SYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINS 369
++L L AC+HAGL +E + F M+G ++ + HY +VD+L R GR +EAY I +
Sbjct: 285 AFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQA 344
Query: 370 MPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDV 429
MP P W +LLGA + YG +E+AE+A+R+L+ + + ++VLL +Y + R +
Sbjct: 345 MPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEA 404
Query: 430 KRVREAMITKDVRKVPGFSY 449
+R+R M V+ PG S+
Sbjct: 405 ERLRLKMKESGVKVSPGSSW 424
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 69 PSTNDWNAVLRGLAMSPQPT-QAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQ 127
P+ + +NA+++GL + + +AI +YR + K + +T + C+ F +
Sbjct: 144 PNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKE 203
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
IHS R + Y + G + Q VFD M RD+ +W+++IS A
Sbjct: 204 IHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGD 263
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV-DEKLDMNVIVCN 246
A+ F+ M+ P+D+ L L ACS G + + + D L + +
Sbjct: 264 AESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYS 323
Query: 247 AVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMA 283
++D+ S+ G ++AY V Q M + TW ++ A
Sbjct: 324 CLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGA 360
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 207/427 (48%), Gaps = 40/427 (9%)
Query: 62 IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT 121
+F R N WN+++ G + +A+ + + R+ + D+ T + + C
Sbjct: 275 LFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGF 333
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGD------------------------- 156
Q+H +FG Y+K G
Sbjct: 334 LETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKV 393
Query: 157 ------LDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
+D A++VF+ + + + SWN+M +G +Q E + F +M + ++V++
Sbjct: 394 YFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSL 453
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+SAC+ + +L+ GE V LD + +V +++ID+Y KCGFV+ VF M
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+ + WN+MI +A NG G++A+DL +M++ G+ P ++++ L ACN+ GLVEEG +
Sbjct: 514 SDE-VPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRK 572
Query: 331 LFDLMK---GSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASK 387
LF+ MK G V P+ +H+ +VDLL RAG ++EA + + MP D +W S+L
Sbjct: 573 LFESMKVDHGFV--PDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCV 630
Query: 388 TYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGF 447
G M + A+ K++E+ + +V LS ++A W VR+ M +V K PG
Sbjct: 631 ANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGS 690
Query: 448 SYTEIDC 454
S+T DC
Sbjct: 691 SWT--DC 695
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 167/404 (41%), Gaps = 68/404 (16%)
Query: 49 AISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALT 108
+ A +LS A ++F + N++L G ++ +A+ ++ ++ S DA+T
Sbjct: 133 GFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAIT 189
Query: 109 CSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL----------- 157
+ LK CA QIH+Q+L G + YAK GDL
Sbjct: 190 LTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR 249
Query: 158 --------------------DAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKR 197
+ ++ +FD R + WN+MISG + EA+ LF
Sbjct: 250 EPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNE 309
Query: 198 MKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGF 257
M+ E R + T+ ++AC LG L+ G+ +H + L +++V + ++DMYSKCG
Sbjct: 310 MRNET-REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGS 368
Query: 258 -------------------------------VDKAYSVFQNMSCTKSLITWNTMIMAFAM 286
+D A VF+ + KSLI+WN+M F+
Sbjct: 369 PMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIE-NKSLISWNSMTNGFSQ 427
Query: 287 NGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH 346
NG + L+ QM + D VS + + AC +E G ++F + +
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVV 487
Query: 347 YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
S++DL + G ++ ++M + D V W S++ T G
Sbjct: 488 SSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 15/243 (6%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F RI+N S WN++ G + + + + ++ + + D ++ S + CA
Sbjct: 403 AKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACAS 462
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAM 178
+ Q+ ++ G D+ Y K G ++ ++VFD M K D WN+M
Sbjct: 463 ISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSM 522
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG-------EIVHG 231
ISG A + EAI LFK+M G RP +T + L+AC+ G +++G ++ HG
Sbjct: 523 ISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHG 582
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGY 291
++ D++ + ++D+ ++ G+V++A ++ + M W++++ N GY
Sbjct: 583 FVPDKEH------FSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVAN--GY 634
Query: 292 KAL 294
KA+
Sbjct: 635 KAM 637
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 124/327 (37%), Gaps = 115/327 (35%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE-EGWRPN--- 206
Y+++G + A+ +FDEMP R+ SWN MI G ++ F M E +G+ N
Sbjct: 72 YSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVV 131
Query: 207 ----------------------DVTVLGAL------------------------------ 214
DV L +L
Sbjct: 132 SGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLT 191
Query: 215 ---SACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSK----------------- 254
AC++L ALK G+ +H I+ ++ + + ++++++Y+K
Sbjct: 192 TVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 255 --------------CGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
CG V+++ +F S + +I WN+MI + N +AL L ++M
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKS-NRCVILWNSMISGYIANNMKMEALVLFNEM 310
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRL------FDLMKGSVVKPNMKHYGSVVDLL 354
+ D+ + A + AC G +E G ++ F L+ VV +++D+
Sbjct: 311 R-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAS------TLLDMY 363
Query: 355 GRAGRIKEA---------YDTI--NSM 370
+ G EA YDTI NSM
Sbjct: 364 SKCGSPMEACKLFSEVESYDTILLNSM 390
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 197/399 (49%), Gaps = 2/399 (0%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S L + ++F+ I W +++ G +AI + + D T +
Sbjct: 496 SKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLA 555
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
L C+ + +IH LR G D Y+K G L A++V+D +P+
Sbjct: 556 AVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPEL 615
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
D S +++ISG +Q + LF+ M G+ + + L A + G VH
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVH 675
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
YI L V ++++ MYSK G +D F ++ LI W +I ++A +G
Sbjct: 676 AYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQHGKA 734
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG-VRLFDLMKGSVVKPNMKHYGS 349
+AL + + M G PD V+++ L AC+H GLVEE L ++K ++P +HY
Sbjct: 735 NEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVC 794
Query: 350 VVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNS 409
+VD LGR+GR++EA IN+M + PD ++W +LL A K +G VE+ ++A++K +E+ +
Sbjct: 795 MVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSD 854
Query: 410 CGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
G ++ LSN+ A W +V+ R+ M V+K PG+S
Sbjct: 855 AGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 159/368 (43%), Gaps = 7/368 (1%)
Query: 28 HLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQP 87
H I G F + + L+++ S A ++FR + + WN ++ G +
Sbjct: 175 HTIKMGYFFYEVVESALIDV--FSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNY 232
Query: 88 TQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXX 147
+ + QK D+ T S L CA + ++V++ G +
Sbjct: 233 GAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAI 291
Query: 148 XXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPND 207
YAK G + A +VF +P + SW M+SG + + A+ +FK M+ G N+
Sbjct: 292 VDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINN 351
Query: 208 VTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQN 267
TV +SAC + + + VH ++ ++ V A+I MYSK G +D + VF++
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Query: 268 MSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEE 327
+ + N MI +F+ + KA+ L +M +G+ D S + L + L ++
Sbjct: 412 LDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQ 471
Query: 328 GVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASK 387
V + L G V+ ++ S+ L + G ++E+Y +P D W S++
Sbjct: 472 -VHGYTLKSGLVL--DLTVGSSLFTLYSKCGSLEESYKLFQGIP-FKDNACWASMISGFN 527
Query: 388 TYGNVEMA 395
YG + A
Sbjct: 528 EYGYLREA 535
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 165/364 (45%), Gaps = 20/364 (5%)
Query: 51 SPAADLSFAAQIFRRIQN-PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALT- 108
S + D+ + Q+F + + N N ++ + S +P +AI + + + + D +
Sbjct: 397 SKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSV 456
Query: 109 CSF-ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEM 167
CS ++ C + Q+H L+ G Y+K G L+ + K+F +
Sbjct: 457 CSLLSVLDC-----LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGI 511
Query: 168 PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE 227
P +D A W +MISG + EAI LF M ++G P++ T+ L+ CS +L +G+
Sbjct: 512 PFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGK 571
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMN 287
+HGY + +D + + +A+++MYSKCG + A V+ + ++ +++I ++ +
Sbjct: 572 EIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQH 630
Query: 288 GDGYKALDLLDQMALDGVHPD--AVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMK 345
G L M + G D A+S + A + + V + G +P++
Sbjct: 631 GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG 690
Query: 346 HYGSVVDLLGRAGRIKE---AYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKL 402
S++ + + G I + A+ IN PD++ W +L+ + +G A +
Sbjct: 691 --SSLLTMYSKFGSIDDCCKAFSQING----PDLIAWTALIASYAQHGKANEALQVYNLM 744
Query: 403 VEMG 406
E G
Sbjct: 745 KEKG 748
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 121/236 (51%), Gaps = 9/236 (3%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y+ +G + A K+FD +P+ D+ S N MISG Q E++ F +M G+ N+++
Sbjct: 94 YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISY 153
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+SACS L A E+V + + +V +A+ID++SK + AY VF++ S
Sbjct: 154 GSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD-SL 212
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+ ++ WNT+I N + DL +M + PD+ +Y + L AC A L E +R
Sbjct: 213 SANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC--ASL--EKLR 268
Query: 331 LFDLMKGSVVKPNMKHY---GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+++ V+K + ++VDL + G + EA + + +P P VV W +L
Sbjct: 269 FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN-PSVVSWTVML 323
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 215/414 (51%), Gaps = 14/414 (3%)
Query: 48 CAISPAADLSFAAQIFRRIQNPS-TND---WNAVLRGLAMSPQPTQAISWYRSVSRSPQ- 102
C + DL+ A F R++ S T D WN+V+ G A S +++ ++++SR +
Sbjct: 521 CWLQKLGDLTSA---FLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKI 577
Query: 103 KVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQK 162
+ D +T + + H ++ + Y + D+++A K
Sbjct: 578 RHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVK 637
Query: 163 VFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGA 222
VF + ++ SWN +IS L+Q E LF+ +K E PN++T +G LSA +QLG+
Sbjct: 638 VFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGS 694
Query: 223 LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
G H +++ N V A++DMYS CG ++ VF+N S S+ WN++I
Sbjct: 695 TSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRN-SGVNSISAWNSVIS 753
Query: 283 AFAMNGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-V 340
A +G G KA++L +++ + + P+ S+++ L AC+H+G ++EG+ + M+ V
Sbjct: 754 AHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGV 813
Query: 341 KPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASR 400
KP +H +VD+LGRAG+++EAY+ I + +W +LL A +G+ ++ + +
Sbjct: 814 KPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAE 873
Query: 401 KLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDC 454
L EM ++ ++ L+N Y W + R+R+ + ++K+PG+S ++ C
Sbjct: 874 VLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVRC 927
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 166/371 (44%), Gaps = 16/371 (4%)
Query: 53 AADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFA 112
+L ++ +F ++ WN+++ L + + A+ + + + D+ T A
Sbjct: 135 TGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLA 194
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
+ + + +H + G YAK +L +A+ VF M RDI
Sbjct: 195 ASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDI 254
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
SWN +++ P +++ FK M G + VT +SACS + L GE +HG
Sbjct: 255 VSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGL 314
Query: 233 IVDEKL--DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
++ + +V V N++I MYSKCG + A +VF+ + C + +I+ N ++ FA NG
Sbjct: 315 VIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVC-RDVISSNAILNGFAANGMF 373
Query: 291 YKALDLLDQM-ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH--- 346
+A +L+QM ++D + PD + ++ C EG + G V+ M+
Sbjct: 374 EEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG----RAVHGYTVRMEMQSRAL 429
Query: 347 --YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE 404
SV+D+ G+ G +A + + D+V W S++ A G A+ +++V
Sbjct: 430 EVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS 488
Query: 405 MGSNSCGDFVL 415
SC F L
Sbjct: 489 --EYSCSKFSL 497
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 4/270 (1%)
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSR 187
+H L+ G Y +TG+L ++ +FDE+ ++D+ WN+MI+ L Q R
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 188 PNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNA 247
A+ LF M +G + T+L A SA S L ++ ++H ++ L + +CNA
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228
Query: 248 VIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
++++Y+K + A VF +M + +++WNT++ NG K+L M G
Sbjct: 229 LMNLYAKGENLSSAECVFTHME-HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEA 287
Query: 308 DAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKP--NMKHYGSVVDLLGRAGRIKEAYD 365
D V++ + AC+ + G L L+ S P ++ S++ + + G EA +
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGD-TEAAE 346
Query: 366 TINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
T+ + DV+ ++L G E A
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEA 376
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 148/392 (37%), Gaps = 55/392 (14%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S D A +F + NA+L G A + +A + + +
Sbjct: 337 SKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATV 396
Query: 111 FALKGCARALTFS-EATQIHSQVLRFGFDAXXXXXXXXXX-XYAKTGDLDAAQKVFDEMP 168
++ L+FS E +H +R + Y K G A+ +F
Sbjct: 397 VSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTT 456
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEE--GWRPNDVTVLGALSACSQLGALKQG 226
RD+ SWN+MIS +Q ++A LFK + E + + TVL L++C +L G
Sbjct: 457 HRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG 516
Query: 227 EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAM 286
+ VH ++ K G + A+ + MS T+ L +WN++I A
Sbjct: 517 KSVHCWL-------------------QKLGDLTSAFLRLETMSETRDLTSWNSVISGCAS 557
Query: 287 NGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEG----------VRLFDL- 334
+G ++L M+ +G + D ++ L + A + GLV +G +R D
Sbjct: 558 SGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQ 617
Query: 335 --------------------MKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLP 374
+ G + PN+ + V+ L + +E + ++ + P
Sbjct: 618 LQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEP 677
Query: 375 DVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ + + LL AS G+ A L+ G
Sbjct: 678 NEITFVGLLSASTQLGSTSYGMQAHCHLIRRG 709
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 174/302 (57%), Gaps = 2/302 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
YA G+++ A+ F++ P++ SWN++I+ + EA+ LF RM EG +P+ T+
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
LSA + L L+ G +H +V + +V V NA+I MYS+CG + ++ +F M
Sbjct: 413 TSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKL 471
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG-V 329
+ +ITWN MI +A +G+ +AL+L M +G++P +++++ L AC HAGLV+E
Sbjct: 472 KREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKA 531
Query: 330 RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
+ +M ++P M+HY S+V++ G+ +EA I SMP PD +W +LL A + Y
Sbjct: 532 QFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIY 591
Query: 390 GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
NV +A +A+ + + S +VLL N+YA W + +VR M +K ++K G S+
Sbjct: 592 NNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSW 651
Query: 450 TE 451
+
Sbjct: 652 VD 653
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 41/245 (16%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y K GD+ +A+ +FD+M RD SWN MI G SR +A ALF M PN
Sbjct: 291 YLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PN---- 340
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
H + N ++ Y+ G V+ A F+ +
Sbjct: 341 ----------------RDAHSW-------------NMMVSGYASVGNVELARHYFEK-TP 370
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
K ++WN++I A+ N D +A+DL +M ++G PD + + L A + G++
Sbjct: 371 EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ 430
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
+ ++ +V+ P++ + +++ + R G I E+ + M + +V+ W +++G +G
Sbjct: 431 MHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489
Query: 391 NVEMA 395
N A
Sbjct: 490 NASEA 494
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 145/360 (40%), Gaps = 42/360 (11%)
Query: 46 ELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVD 105
EL + + ++ A IF +++ +T WN ++ G + QA R + K D
Sbjct: 46 ELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQA----RKLFDVMPKRD 101
Query: 106 ALTCSFALKG---CARALTFSEATQIHSQV-LRFGFDAXXXXXXXXXXXYAKTGDLDAAQ 161
+T + + G C EA ++ ++ R F YAK + A
Sbjct: 102 VVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFS-----WNTMISGYAKNRRIGEAL 156
Query: 162 KVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG 221
+F++MP+R+ SW+AMI+G Q + A+ LF++M + P V G L +L
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAG-LIKNERLS 215
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS------------ 269
+G +V + D+ V N +I Y + G V+ A +F +
Sbjct: 216 EAAWVLGQYGSLVSGREDL-VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 270 --CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEE 327
K++++WN+MI A+ GD A L DQM D +S+ + H +E+
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMED 330
Query: 328 GVRLFDLMKGSVVKPN--MKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
LF M PN + +V G ++ A P V W S++ A
Sbjct: 331 AFALFSEM------PNRDAHSWNMMVSGYASVGNVELARHYFEKTPE-KHTVSWNSIIAA 383
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 49/265 (18%)
Query: 157 LDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSA 216
L+ A+K+FDEMP RD SWN MISG A+ R EA+ LF++M E N V+ ++
Sbjct: 121 LEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMIT- 175
Query: 217 CSQLGALKQGEIVHGYIVDEKLDM--NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKS- 273
G + GE+ ++ K+ + + +C V + + A+ + Q S
Sbjct: 176 ----GFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGR 231
Query: 274 ---LITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAG------- 323
+ +NT+I+ + G A L DQ+ PD LC +H G
Sbjct: 232 EDLVYAYNTLIVGYGQRGQVEAARCLFDQI------PD-------LCGDDHGGEFRERFC 278
Query: 324 --------LVEEGVRLFDLMKGSVVKPNMK-----HYGSVVDLLGRAGRIKEAYDTINSM 370
+++ +++ D++ ++ MK + +++D R+++A+ + M
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Query: 371 PMLPDVVLWQSLLGASKTYGNVEMA 395
P D W ++ + GNVE+A
Sbjct: 339 PN-RDAHSWNMMVSGYASVGNVELA 362
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 149/356 (41%), Gaps = 47/356 (13%)
Query: 153 KTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLG 212
++G + A+ +F+++ R+ +WN MISG + N+A LF M + + + G
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 213 ALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK 272
+S C + L++ + DE + N +I Y+K + +A +F+ M +
Sbjct: 112 YVS-CGGIRFLEEAR----KLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP-ER 165
Query: 273 SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF 332
+ ++W+ MI F NG+ A+ L +M + P LCA AGL++ RL
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP--------LCAL-VAGLIKNE-RLS 215
Query: 333 DL-----MKGSVVKPN---MKHYGSVVDLLGRAGRIKEAYDTINSMPML----------- 373
+ GS+V + Y +++ G+ G+++ A + +P L
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 374 ---PDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVK 430
+VV W S++ A G+V A + ++ + + S + + Y R D
Sbjct: 276 RFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMI---DGYVHVSRMEDAF 332
Query: 431 RVREAMITKDVRK----VPGF-SYTEIDCKIHKFINGDQSHP-NWKEIYAKMDEIK 480
+ M +D V G+ S ++ H F + H +W I A ++ K
Sbjct: 333 ALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 186/323 (57%), Gaps = 10/323 (3%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y + GD+ A +F ++ +D +W MISGL Q EA +L M G +P + T
Sbjct: 410 YLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTY 469
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEK--LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
LS+ L QG+ +H I D ++I+ N+++ MY+KCG ++ AY +F M
Sbjct: 470 SVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM 529
Query: 269 SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG 328
K ++WN+MIM + +G KAL+L +M G P++V++L L AC+H+GL+ G
Sbjct: 530 -VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRG 588
Query: 329 VRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGAS- 386
+ LF MK + ++P + HY S++DLLGRAG++KEA + I+++P PD ++ +LLG
Sbjct: 589 LELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCG 648
Query: 387 ---KTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDV-KRVREAMITKDVR 442
+ +AE A+ +L+E+ + V L NVYA R HD+ K +R+ M K V+
Sbjct: 649 LNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGR-HDMEKEMRKEMGIKGVK 707
Query: 443 KVPGFSYTEIDCKIHKFINGDQS 465
K PG S+ ++ + + F++GD+S
Sbjct: 708 KTPGCSWVVVNGRANVFLSGDKS 730
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 12/280 (4%)
Query: 53 AADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFA 112
A D+S A +F+++ + W ++ GL + +A S + R K T S
Sbjct: 413 AGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVL 472
Query: 113 LKGCARALTFSEATQIHSQVLRFG--FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
L + IH + + +D YAK G ++ A ++F +M ++
Sbjct: 473 LSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK 532
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG---- 226
D SWN+MI GL+ ++A+ LFK M + G +PN VT LG LSACS G + +G
Sbjct: 533 DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELF 592
Query: 227 -EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFA 285
+ Y + +D + ++ID+ + G + +A + T + ++
Sbjct: 593 KAMKETYSIQPGIDHYI----SMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCG 648
Query: 286 MNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN-HAGL 324
+N A + ++ A+ + D V+ + CN +AGL
Sbjct: 649 LNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGL 688
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 166/419 (39%), Gaps = 82/419 (19%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F + + WN ++ GL + +A + V + D ++ + +KG
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKA----KQVFDAMPSRDVVSWNAMIKG--- 209
Query: 119 ALTFSEATQIHSQVLRFG--FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWN 176
+ E + L FG + Y + GD+ A ++F EMP+R+I SW
Sbjct: 210 ---YIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWT 266
Query: 177 AMISGLAQGSRPNEAIALFKRMKE--EGWRPNDVTVLGALSACSQLGA--LKQGEIVHGY 232
AMISG A EA+ LF MK+ + PN T++ AC LG + GE +H
Sbjct: 267 AMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQ 326
Query: 233 IV---------DEKLDMNVI-----------------------VCNAVIDMYSKCGFVDK 260
++ D +L +++ CN +I+ Y K G +++
Sbjct: 327 VISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLER 386
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL-------------------------- 294
A ++F+ + ++W +MI + GD +A
Sbjct: 387 AETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNEL 446
Query: 295 -----DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVV--KPNMKHY 347
LL M G+ P +Y L + +++G + ++ + P++
Sbjct: 447 FAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQ 506
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
S+V + + G I++AY+ M + D V W S++ +G + A +++++ G
Sbjct: 507 NSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG 564
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 14/182 (7%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
YAKTG LD A+ +F+ MP+R+I + NAM++G + R NEA LF+ M + N V+
Sbjct: 87 YAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSW 141
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
L+A G + + V + DE + NV+ N ++ + G ++KA VF M
Sbjct: 142 TVMLTALCDDG--RSEDAVE--LFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMP- 196
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
++ +++WN MI + N DG + LL D + V++ + + G V E R
Sbjct: 197 SRDVVSWNAMIKGYIEN-DGMEEAKLLFG---DMSEKNVVTWTSMVYGYCRYGDVREAYR 252
Query: 331 LF 332
LF
Sbjct: 253 LF 254
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 29/242 (11%)
Query: 223 LKQGEIVHGYIVDEKLDMN-----VIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITW 277
L +G +VH + +K+ V+ +++ Y+K G++D+A +F+ M ++++T
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP-ERNIVTC 111
Query: 278 NTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKG 337
N M+ + +A L +M + VS+ L A G E+ V LFD M
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMP-----KNVVSWTVMLTALCDDGRSEDAVELFDEMP- 165
Query: 338 SVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEM 397
+ N+ + ++V L R G +++A ++MP DVV W +++ G +E M
Sbjct: 166 ---ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS-RDVVSWNAMIK-----GYIENDGM 216
Query: 398 ASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVK-------RVREAMITKDVRKVPGFSYT 450
KL+ G S + V +++ R+ DV+ + E I + GF++
Sbjct: 217 EEAKLL-FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWN 275
Query: 451 EI 452
E+
Sbjct: 276 EL 277
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 206/412 (50%), Gaps = 38/412 (9%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+N ++R + + +++ + + S + + LT +K + + S +H Q L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE--------------------------- 166
+ GF Y + GDL++++K+FD+
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 167 ----MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG---WRPNDVTVLGALSACSQ 219
MP D+ SW +I+G ++ +A+ +F M + PN+ T + LS+C+
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 220 L--GALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITW 277
G ++ G+ +HGY++ +++ + + A++DMY K G ++ A ++F + K + W
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR-DKKVCAW 292
Query: 278 NTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKG 337
N +I A A NG +AL++ + M VHP+ ++ LA L AC + LV+ G++LF +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 338 SV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAE 396
+ P +HYG VVDL+GRAG + +A + I S+P PD + +LLGA K + N E+
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 397 MASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
++L+ + CG +V LS A W + +++R+AMI +RK+P +S
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 14/234 (5%)
Query: 44 LLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQK 103
LL+ C + D +F + F+R+ W V+ G + +A+ + + ++ +
Sbjct: 158 LLDACGRNGEMDYAF--EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERA 215
Query: 104 V---DALTCSFALKGCARALTFSEA-----TQIHSQVLRFGFDAXXXXXXXXXXXYAKTG 155
V + T L CA F + QIH V+ Y K G
Sbjct: 216 VITPNEATFVSVLSSCAN---FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAG 272
Query: 156 DLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALS 215
DL+ A +FD++ + + +WNA+IS LA RP +A+ +F+ MK PN +T+L L+
Sbjct: 273 DLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILT 332
Query: 216 ACSQLGALKQGEIVHGYIVDE-KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
AC++ + G + I E K+ V+D+ + G + A + Q++
Sbjct: 333 ACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL 386
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 214/433 (49%), Gaps = 42/433 (9%)
Query: 16 CHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPA-ADLSFAAQIFRRIQNPSTNDW 74
C + +KQ+ +I K + + + +L ++S + + +A+ +F ++Q+PST W
Sbjct: 30 CSNFSQLKQIHTKII---KHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTW 86
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQ-KVDALTCSFALKGCARALTFSEATQIHSQVL 133
N ++R L+++ +P +A+ + + S Q + D T F +K C + + TQ+H +
Sbjct: 87 NLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAI 146
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGS------- 186
+ GF Y K G D+ +KVFD+MP R I SW M+ GL S
Sbjct: 147 KAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEI 206
Query: 187 ------------------------RPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGA 222
RP+EA LF+RM+ + +PN+ T++ L A +QLG+
Sbjct: 207 VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGS 266
Query: 223 LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
L G VH Y ++ + A+IDMYSKCG + A VF M KSL TWN+MI
Sbjct: 267 LSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ-GKSLATWNSMIT 325
Query: 283 AFAMNGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFD-LMKGSVV 340
+ ++G G +AL L ++M + V PDA++++ L AC + G V++G+R F +++ +
Sbjct: 326 SLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGI 385
Query: 341 KPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASR 400
P +H ++ LL +A +++A + + SM PD + S G T G E E S+
Sbjct: 386 SPIREHNACMIQLLEQALEVEKASNLVESMDSDPD---FNSSFGNEYTDGMNETNETPSQ 442
Query: 401 KLVEMGSNSCGDF 413
+ G F
Sbjct: 443 HQIMFTKWDTGRF 455
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 15/246 (6%)
Query: 99 RSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLD 158
RSP+ S+ L+ C+ FS+ QIH+++++ + G+
Sbjct: 19 RSPE------ASYFLRTCS---NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQ 69
Query: 159 AAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPND-VTVLGALSAC 217
A VF+++ +WN MI L+ +P EA+ LF M D T + AC
Sbjct: 70 YASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKAC 129
Query: 218 SQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITW 277
+++ G VHG + +V N ++D+Y KCG D VF M +S+++W
Sbjct: 130 LASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMP-GRSIVSW 188
Query: 278 NTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKG 337
TM+ N A + +QM + V VS+ A + A +E +LF M+
Sbjct: 189 TTMLYGLVSNSQLDSAEIVFNQMPMRNV----VSWTAMITAYVKNRRPDEAFQLFRRMQV 244
Query: 338 SVVKPN 343
VKPN
Sbjct: 245 DDVKPN 250
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 196/394 (49%), Gaps = 24/394 (6%)
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
+A+ + K + EG+ + + C AL++ ++VH +I ++ N++I
Sbjct: 164 KAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSII 223
Query: 250 DMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDA 309
+MYS CG V+ A +VF +M ++L TW +I FA NG G A+D + +G PD
Sbjct: 224 EMYSGCGSVEDALTVFNSMP-ERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDG 282
Query: 310 VSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTIN 368
+ AC G + EG+ F+ M K + P M+HY S+V +L G + EA +
Sbjct: 283 EMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVE 342
Query: 369 SMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFV-LLSNVYAARQRWH 427
SM P+V LW++L+ S+ +G++ + + C D V L ++
Sbjct: 343 SME--PNVDLWETLMNLSRVHGDLILGD------------RCQDMVEQLDASRLNKESKA 388
Query: 428 DVKRVREAMITKD--VRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRIKA 485
+ V+ + + K+ R G +Y I GD S P +E+Y + +K +
Sbjct: 389 GLVPVKSSDLVKEKLQRMAKGPNYG-----IRYMAAGDISRPENRELYMALKSLKEHMIE 443
Query: 486 YGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDCHTV 545
GY + L LHD+ +E KD L H+E+ A + T + I+V+KNLR+C DCH
Sbjct: 444 IGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNA 503
Query: 546 IKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+K++S I RE+I RD RF K GVCSC +YW
Sbjct: 504 LKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 15/222 (6%)
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASW 175
C A EA +H + + Y+ G ++ A VF+ MP+R++ +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD 235
+I A+ + +AI F R K+EG +P+ AC LG + +G + +
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 236 EKLDMNVIVCN----AVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD-- 289
E +I C +++ M ++ G++D+A ++M L W T++ ++GD
Sbjct: 311 E---YGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNVDL--WETLMNLSRVHGDLI 365
Query: 290 -GYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
G + D+++Q+ ++ ++ A L + LV+E ++
Sbjct: 366 LGDRCQDMVEQLDASRLNKESK---AGLVPVKSSDLVKEKLQ 404
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 208/435 (47%), Gaps = 46/435 (10%)
Query: 58 FAAQIFRRIQNPSTNDWNAVLRGL----AMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
AA++F ++ + S +NA + GL M+ P+ + S P V + A+
Sbjct: 182 LAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVN---AI 238
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----- 168
CA L Q+H V++ F Y+K +A VF E+
Sbjct: 239 TACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNL 298
Query: 169 -------------------------------KRDIASWNAMISGLAQGSRPNEAIALFKR 197
K D A+WN++ISG +Q + EA F+R
Sbjct: 299 ISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFER 358
Query: 198 MKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGF 257
M P+ + LSACS + LK G+ +HG+++ + ++ V ++IDMY KCG
Sbjct: 359 MLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGL 418
Query: 258 VDKAYSVFQNMSC-TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
A +F K + WN MI + +G+ A+++ + + + V P ++ A L
Sbjct: 419 SSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVL 478
Query: 317 CACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPD 375
AC+H G VE+G ++F LM+ KP+ +H G ++DLLGR+GR++EA + I+ M
Sbjct: 479 SACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSS 538
Query: 376 VVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREA 435
V SLLG+ + + + + E A+ KL E+ + FV+LS++YAA +RW DV+ +R+
Sbjct: 539 SVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQV 597
Query: 436 MITKDVRKVPGFSYT 450
+ K + K+PG S +
Sbjct: 598 IDQKQLVKLPGLSLS 612
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 162/328 (49%), Gaps = 6/328 (1%)
Query: 25 LQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMS 84
L A ++ TG F + T L+ + ++ A ++ + NA + GL +
Sbjct: 53 LHAQVVKTGFFVDVFTATALVSM--YMKVKQVTDALKVLDEMPERGIASVNAAVSGLLEN 110
Query: 85 PQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXX 144
A + S ++++T + L GC Q+H ++ GF+
Sbjct: 111 GFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYVG 167
Query: 145 XXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKE-EGW 203
Y++ G+ A ++F+++P + + ++NA ISGL + N ++F M++
Sbjct: 168 TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSE 227
Query: 204 RPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYS 263
PNDVT + A++AC+ L L+ G +HG ++ ++ +V A+IDMYSKC AY
Sbjct: 228 EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYI 287
Query: 264 VFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAG 323
VF + T++LI+WN++I +NG A++L +++ +G+ PD+ ++ + + + G
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG 347
Query: 324 LVEEGVRLFDLMKGSVVKPNMKHYGSVV 351
V E + F+ M V+ P++K S++
Sbjct: 348 KVIEAFKFFERMLSVVMVPSLKCLTSLL 375
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 8/307 (2%)
Query: 97 VSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGD 156
+S SP K T LK CA+ + +H+QV++ GF Y K
Sbjct: 25 LSHSPNK---FTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQ 81
Query: 157 LDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSA 216
+ A KV DEMP+R IAS NA +SGL + +A +F + G N VTV L
Sbjct: 82 VTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGG 141
Query: 217 CSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLIT 276
C G ++ G +H + +M V V +++ MYS+CG A +F+ + KS++T
Sbjct: 142 C---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVT 197
Query: 277 WNTMIMAFAMNGDGYKALDLLDQM-ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
+N I NG + + M P+ V+++ A+ AC ++ G +L L+
Sbjct: 198 YNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLV 257
Query: 336 KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ +++D+ + K AY + +++ W S++ G E A
Sbjct: 258 MKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETA 317
Query: 396 EMASRKL 402
KL
Sbjct: 318 VELFEKL 324
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 222/442 (50%), Gaps = 32/442 (7%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLA 82
+Q+ A +I G S+T L+++ S L + ++F ++ WNA+L G
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDM--YSKYGHLVDSVRVFESVEEKDLVSWNALLSGFL 161
Query: 83 MSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXX 142
+ + +A+ + ++ R ++ T S +K CA + Q+H+ V+ G D
Sbjct: 162 RNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRD-LVV 220
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMP-KRDIASWNAMISGLAQGSRPNEAIALFKRMKEE 201
Y+ G ++ A KV++ + D N++ISG + EA L R
Sbjct: 221 LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ--- 277
Query: 202 GWRPNDVTVLGALSACSQLGALKQGEIVH------GYIVDEKLDMNVIVCNAVIDMYSKC 255
RPN + +L+ CS L G+ +H G++ D KL CN ++DMY KC
Sbjct: 278 --RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKL------CNGLMDMYGKC 329
Query: 256 GFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG--VHPDAVSYL 313
G + +A ++F+ + +KS+++W +MI A+A+NGDG KAL++ +M +G V P++V++L
Sbjct: 330 GQIVQARTIFRAIP-SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFL 388
Query: 314 AALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSM-- 370
+ AC HAGLV+EG F +MK + P +HY +D+L +AG +E + + M
Sbjct: 389 VVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMME 448
Query: 371 ---PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE-MGSNSCGDFVLLSNVYAARQRW 426
+P +W ++L A ++ E +R+L+E G + +VL+SN YAA +W
Sbjct: 449 NDNQSIP-CAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKW 507
Query: 427 HDVKRVREAMITKDVRKVPGFS 448
V+ +R + K + K G S
Sbjct: 508 DVVEELRGKLKNKGLVKTAGHS 529
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 180/399 (45%), Gaps = 17/399 (4%)
Query: 84 SPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSE-ATQIHSQVLRFGFDAXXX 142
S P ++ + + R+ + + T + L C+ L++ E Q+H+ +++ G +
Sbjct: 62 SGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS-LLSYPETGRQVHALMIKQGAETGTI 120
Query: 143 XXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
Y+K G L + +VF+ + ++D+ SWNA++SG + + EA+ +F M E
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
++ T+ + C+ L L+QG+ VH +V D+ V++ A+I YS G +++A
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAM 239
Query: 263 SVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC--N 320
V+ +++ + N++I N + +A L+ + P+ ++L C N
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDN 294
Query: 321 HAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQ 380
+ + + L G V + K ++D+ G+ G+I +A ++P VV W
Sbjct: 295 SDLWIGKQIHCVALRNGFV--SDSKLCNGLMDMYGKCGQIVQARTIFRAIPS-KSVVSWT 351
Query: 381 SLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVRE--AMIT 438
S++ A G+ A R++ E GS + V V +A VK +E M+
Sbjct: 352 SMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMK 411
Query: 439 KDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMD 477
+ R VPG + C I ++ W+ + M+
Sbjct: 412 EKYRLVPGTEHYV--CFIDILSKAGETEEIWRLVERMME 448
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 209/399 (52%), Gaps = 16/399 (4%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
S A + F R+ +NA+ +G +A Y+++ D+ T L+
Sbjct: 452 FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQT 511
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP-KRDIAS 174
CA ++ + ++ Q+++ GFD+ + K L AA +FD+ ++ S
Sbjct: 512 CAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVS 571
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
WN M++G + EA+A F++MK E ++PN VT + + A ++L AL+ G VH ++
Sbjct: 572 WNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI 631
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
V N+++DMY+KCG ++ + F +S K +++WNTM+ A+A +G A+
Sbjct: 632 QCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS-NKYIVSWNTMLSAYAAHGLASCAV 690
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDL 353
L M + + PD+VS+L+ L AC HAGLVEEG R+F+ M + ++ ++HY +VDL
Sbjct: 691 SLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDL 750
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDF 413
LG+AG EA + + M + V +W +LL +S+ + N+ ++ A +LV++
Sbjct: 751 LGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEP------ 804
Query: 414 VLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEI 452
L + Y+ +R +V V ++KVP S+ E+
Sbjct: 805 -LNPSHYSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 157/349 (44%), Gaps = 19/349 (5%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S +L A Q+F I++ W+A++ + Q +AIS +R + R K +A+T +
Sbjct: 346 SKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLT 405
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
L+GCA IH ++ ++ YAK G A K F+ +P +
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
D ++NA+ G Q N+A ++K MK G P+ T++G L C+ +G V+
Sbjct: 466 DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVY 525
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
G I+ D V +A+I+M++KC + A +F KS ++WN M+ + ++G
Sbjct: 526 GQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQA 585
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG-- 348
+A+ QM ++ P+AV+++ +V L L G V ++ G
Sbjct: 586 EEAVATFRQMKVEKFQPNAVTFV---------NIVRAAAELSALRVGMSVHSSLIQCGFC 636
Query: 349 -------SVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
S+VD+ + G I+ + + +V W ++L A +G
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISN-KYIVSWNTMLSAYAAHG 684
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 178/378 (47%), Gaps = 11/378 (2%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
C + + Q+ LI +G P +L+ ++ DLS IF +++P W
Sbjct: 14 ECKNFRCLLQVHGSLIVSG---LKP-HNQLINAYSLFQRQDLSRV--IFDSVRDPGVVLW 67
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQ-KVDALTCSFALKGCARALTFSEATQIHSQVL 133
N+++RG + +A+ ++ +S D + +FALK CA ++ F + +IH +
Sbjct: 68 NSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIA 127
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
G ++ Y K DL +A++VFD+M +D+ +WN M+SGLAQ + A+
Sbjct: 128 EMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALL 187
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
LF M+ + V++ + A S+L +HG ++ K + +IDMY
Sbjct: 188 LFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVI--KKGFIFAFSSGLIDMYC 245
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYL 313
C + A SVF+ + K +W TM+ A+A NG + L+L D M V + V+
Sbjct: 246 NCADLYAAESVFEEVW-RKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304
Query: 314 AALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPML 373
+AL A + G + +G+ + D + ++ S++ + + G ++ A ++
Sbjct: 305 SALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED- 363
Query: 374 PDVVLWQSLLGASKTYGN 391
DVV W +++ + + G
Sbjct: 364 RDVVSWSAMIASYEQAGQ 381
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 151/358 (42%), Gaps = 19/358 (5%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
ADL A +F + + W ++ A + + + + + +++ + + AL
Sbjct: 248 ADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASAL 307
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
+ A + IH ++ G Y+K G+L+ A+++F + RD+
Sbjct: 308 QAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVV 367
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
SW+AMI+ Q + +EAI+LF+ M +PN VT+ L C+ + A + G+ +H Y
Sbjct: 368 SWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYA 427
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ ++ + AVI MY+KCG A F+ + K + +N + + GD KA
Sbjct: 428 IKADIESELETATAVISMYAKCGRFSPALKAFERLP-IKDAVAFNALAQGYTQIGDANKA 486
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG----- 348
D+ M L GV PD+ + + L C D +GS V + +G
Sbjct: 487 FDVYKNMKLHGVCPDSRTMVGMLQTCAFCS---------DYARGSCVYGQIIKHGFDSEC 537
Query: 349 ----SVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKL 402
+++++ + + A + V W ++ +G E A R++
Sbjct: 538 HVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 156/354 (44%), Gaps = 6/354 (1%)
Query: 42 TKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSP 101
T L+E+ A DL A Q+F ++ WN ++ GLA + + A+ + +
Sbjct: 139 TALVEM--YCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCC 196
Query: 102 QKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQ 161
+D ++ + ++ +H V++ GF Y DL AA+
Sbjct: 197 VDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAE 254
Query: 162 KVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG 221
VF+E+ ++D +SW M++ A E + LF M+ R N V AL A + +G
Sbjct: 255 SVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVG 314
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
L +G +H Y V + L +V V +++ MYSKCG ++ A +F N+ + +++W+ MI
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSWSAMI 373
Query: 282 MAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVK 341
++ G +A+ L M + P+AV+ + L C G + + ++
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
++ +V+ + + GR A +P + D V + +L G+ A
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLP-IKDAVAFNALAQGYTQIGDANKA 486
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 211/403 (52%), Gaps = 3/403 (0%)
Query: 49 AISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALT 108
A S A + A+++F I +P WN ++ G + I+ + + + + T
Sbjct: 150 AYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYT 209
Query: 109 CSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP 168
G A +H+ L+ D+ Y++ + +A VF+ +
Sbjct: 210 MVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS 269
Query: 169 KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
+ D+ + +++I+G ++ EA+ LF ++ G +P+ V V L +C++L G+
Sbjct: 270 EPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKE 329
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG 288
VH Y++ L++++ VC+A+IDMYSKCG + A S+F + K+++++N++I+ ++G
Sbjct: 330 VHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLILGLGLHG 388
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHY 347
A + ++ G+ PD +++ A LC C H+GL+ +G +F+ MK ++P +HY
Sbjct: 389 FASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHY 448
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS 407
+V L+G AG+++EA++ + S+ D + +LL + + N +AE+ + + + G
Sbjct: 449 VYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGE 508
Query: 408 NSCGDF-VLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
+ V+LSNVYA RW +V+R+R+ + K+PG S+
Sbjct: 509 ERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 155/352 (44%), Gaps = 2/352 (0%)
Query: 55 DLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
DL A ++F S WN+++R A + Q T +S + + RS + D T + +
Sbjct: 55 DLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLAR 114
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS 174
G + + IH + G Y+K G + A K+F +P D+A
Sbjct: 115 GFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLAL 174
Query: 175 WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIV 234
WN MI G ++ I LF M+ G +PN T++ S L VH + +
Sbjct: 175 WNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCL 234
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
LD + V A+++MYS+C + A SVF ++S L+ +++I ++ G+ +AL
Sbjct: 235 KINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLITGYSRCGNHKEAL 293
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
L ++ + G PD V L +C G + + ++ ++K +++D+
Sbjct: 294 HLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMY 353
Query: 355 GRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ G +K A +P ++V + SL+ +G A +++EMG
Sbjct: 354 SKCGLLKCAMSLFAGIPE-KNIVSFNSLILGLGLHGFASTAFEKFTEILEMG 404
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 12/246 (4%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
YA DL +A+K+FD P+R + WN++I A+ + ++LF ++ RP++ T
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY 109
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
S+ K +HG + L + I +A++ YSK G + +A +F ++
Sbjct: 110 ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIP- 168
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
L WN MI+ + G K ++L + M G P+ + +A +GL++ +
Sbjct: 169 DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALT-----SGLIDPSLL 223
Query: 331 LFDL-MKGSVVKPNMKHYGSV----VDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
L + +K N+ + V V++ R I A NS+ PD+V SL+
Sbjct: 224 LVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE-PDLVACSSLITG 282
Query: 386 SKTYGN 391
GN
Sbjct: 283 YSRCGN 288
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 202/408 (49%), Gaps = 10/408 (2%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S D A ++F ++ WN ++ + A+S Y+ + K D T
Sbjct: 334 SSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFG 393
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
L A +L + + +++FG + Y+K G ++ A +F+ ++
Sbjct: 394 SLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRK 450
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWR--PNDVTVLGALSACSQLGALKQGEI 228
++ SWNA+ISG P E + F + E R P+ T+ LS C +L G
Sbjct: 451 NLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQ 510
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNG 288
H Y++ ++ NA+I+MYS+CG + + VF MS K +++WN++I A++ +G
Sbjct: 511 THAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHG 569
Query: 289 DGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKH 346
+G A++ M +G V PDA ++ A L AC+HAGLVEEG+ +F+ M + V N+ H
Sbjct: 570 EGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDH 629
Query: 347 YGSVVDLLGRAGRIKEAYD--TINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE 404
+ +VDLLGRAG + EA I+ + V +W +L A +G++++ +M ++ L+E
Sbjct: 630 FSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLME 689
Query: 405 MGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEI 452
+ +V LSN+YA W + + R A+ K G S+ +
Sbjct: 690 KEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 154/326 (47%), Gaps = 15/326 (4%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+N V+ GLA + + + + + S + D LT + C+ A + Q+H +
Sbjct: 260 FNVVIDGLAGFKRDESLLVFRKMLEASLRPTD-LTFVSVMGSCSCA---AMGHQVHGLAI 315
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIA 193
+ G++ Y+ D AA KVF+ + ++D+ +WN MIS Q A++
Sbjct: 316 KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMS 375
Query: 194 LFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
++KRM G +P++ T L+ L L E+V I+ L + + NA+I YS
Sbjct: 376 VYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYS 432
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVH--PDA-- 309
K G ++KA +F+ S K+LI+WN +I F NG ++ L+ + V PDA
Sbjct: 433 KNGQIEKADLLFER-SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYT 491
Query: 310 VSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINS 369
+S L ++C + ++ + L G + + + +++++ + G I+ + + N
Sbjct: 492 LSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGN--ALINMYSQCGTIQNSLEVFNQ 549
Query: 370 MPMLPDVVLWQSLLGASKTYGNVEMA 395
M DVV W SL+ A +G E A
Sbjct: 550 MSE-KDVVSWNSLISAYSRHGEGENA 574
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 6/249 (2%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKV-- 104
+ A S + A +F R + WNA++ G + P + + + + S ++
Sbjct: 428 ISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILP 487
Query: 105 DALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVF 164
DA T S L C + +Q H+ VLR G Y++ G + + +VF
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVF 547
Query: 165 DEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWR-PNDVTVLGALSACSQLGAL 223
++M ++D+ SWN++IS ++ A+ +K M++EG P+ T LSACS G +
Sbjct: 548 NQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLV 607
Query: 224 KQG-EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ--NMSCTKSLITWNTM 280
++G EI + + + NV + ++D+ + G +D+A S+ + + + W +
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWAL 667
Query: 281 IMAFAMNGD 289
A A +GD
Sbjct: 668 FSACAAHGD 676
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 30/246 (12%)
Query: 153 KTGDLDAAQKVFDEMPKRD-IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVL 211
K GD++ A +VFD+MP+RD +A WNAMI+G + ++ LF+ M + G R +
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Query: 212 GALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS-C 270
LS C G+L G+ VH ++ + V NA+I MY C V A VF+
Sbjct: 195 TILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 271 TKSLITWNTMIMAFAMNGDGYK---ALDLLDQMALDGVHPDAVSYLAALCACN------- 320
+ +T+N +I A G+K +L + +M + P +++++ + +C+
Sbjct: 254 VRDQVTFNVVIDGLA----GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQ 309
Query: 321 -HAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLW 379
H ++ G + L V M Y S D G A ++ E+ + D+V W
Sbjct: 310 VHGLAIKTGYEKYTL----VSNATMTMYSSFED-FGAAHKVFESLEE-------KDLVTW 357
Query: 380 QSLLGA 385
+++ +
Sbjct: 358 NTMISS 363
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 186/379 (49%), Gaps = 9/379 (2%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKV--DALTCSFALKGC 116
A ++F + + WNA++ ++ +A + + + D T S L C
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Query: 117 ARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWN 176
+ QIH+ + + + YAK+ L A++ F+ M R++ SWN
Sbjct: 256 ----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWN 311
Query: 177 AMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDE 236
AMI G AQ EA+ LF +M E +P+++T LS+C++ A+ + + V + +
Sbjct: 312 AMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKK 371
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDL 296
+ V N++I YS+ G + +A F ++ L++W ++I A A +G ++L +
Sbjct: 372 GSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEESLQM 430
Query: 297 LDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLG 355
+ M L + PD +++L L AC+H GLV+EG+R F M ++ +HY ++DLLG
Sbjct: 431 FESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLG 489
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVL 415
RAG I EA D +NSMP P + G + E + ++KL+E+ ++ +
Sbjct: 490 RAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSI 549
Query: 416 LSNVYAARQRWHDVKRVRE 434
LSN Y + W+ +R+
Sbjct: 550 LSNAYVSEGHWNQAALLRK 568
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 176/383 (45%), Gaps = 23/383 (6%)
Query: 22 IKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGL 81
+KQ ++ G ++ + KLL+ A + + A ++F + + WN ++ G+
Sbjct: 55 VKQEHGFMVKQGIYNSLFLQNKLLQ--AYTKIREFDDADKLFDEMPLRNIVTWNILIHGV 112
Query: 82 AMSPQPTQ-----AISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFG 136
T + + + +D ++ ++ C + Q+H +++ G
Sbjct: 113 IQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQG 172
Query: 137 FDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFK 196
++ Y K G + A++VF+ + RD+ WNA++S +EA L K
Sbjct: 173 LESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 197 RMKEEG--WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSK 254
M + +R + T LSAC ++QG+ +H + ++ V A+++MY+K
Sbjct: 233 LMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAK 288
Query: 255 CGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLA 314
+ A F++M +++++WN MI+ FA NG+G +A+ L QM L+ + PD +++ +
Sbjct: 289 SNHLSDARECFESM-VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFAS 347
Query: 315 ALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL----GRAGRIKEAYDTINSM 370
L +C + E ++ V K + SV + L R G + EA +S+
Sbjct: 348 VLSSCAKFSAIWE----IKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSI 403
Query: 371 PMLPDVVLWQSLLGASKTYGNVE 393
PD+V W S++GA ++G E
Sbjct: 404 RE-PDLVSWTSVIGALASHGFAE 425
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 214/467 (45%), Gaps = 40/467 (8%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTND---WNAVLRGLAMSPQPTQAISWYRSVSRSPQK 103
+ A D+ A +F R NP ND WN ++ G A + +A+ S+ + K
Sbjct: 200 IAAYCREGDIDKALSVFWR--NPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLK 257
Query: 104 VDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLD----- 158
D + L + + ++H++VL+ G + Y K G++
Sbjct: 258 WDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESA 317
Query: 159 --------------------------AAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAI 192
A+++FD + ++++ W AM G +P+ +
Sbjct: 318 HLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVL 377
Query: 193 ALFKR-MKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDM 251
L + + E P+ + ++ L ACS ++ G+ +HG+ + + M+ + A +DM
Sbjct: 378 ELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDM 437
Query: 252 YSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVS 311
YSKCG V+ A +F + S + + +N MI A +G K+ + M G PD ++
Sbjct: 438 YSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEIT 496
Query: 312 YLAALCACNHAGLVEEGVRLF-DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
++A L AC H GLV EG + F +++ + P HY ++DL G+A R+ +A + + +
Sbjct: 497 FMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGI 556
Query: 371 PMLP-DVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDV 429
+ D V+ + L A N E+ + KL+ + ++ ++ ++N YA+ RW ++
Sbjct: 557 DQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEM 616
Query: 430 KRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKM 476
+R+R M K++ G S+ ID + H F + D SH + IYA +
Sbjct: 617 QRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 44/250 (17%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMI------------------------------- 179
Y+K+G L A+ VFDEM +R++ SWNA+I
Sbjct: 33 YSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTL 92
Query: 180 -SGLAQGSR-PNEAIALFKRM----KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
SG A+ +EAI +F M K++ W +D TV + ++L + GE +HG +
Sbjct: 93 LSGFAKTDGCESEAIEMFGEMHRKEKDDIW-IDDFTVTTMVKLSAKLTNVFYGEQLHGVL 151
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSL--ITWNTMIMAFAMNGDGY 291
V D +++I MYSKCG + ++F N SC + + + N MI A+ GD
Sbjct: 152 VKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF-NGSCVEFVDSVARNAMIAAYCREGDID 210
Query: 292 KALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVV 351
KAL + + + D +S+ + G EE +++ M+ + +K + +G+V+
Sbjct: 211 KALSVFWR---NPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Query: 352 DLLGRAGRIK 361
++L +K
Sbjct: 268 NVLSSLKSLK 277
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 160/361 (44%), Gaps = 39/361 (10%)
Query: 63 FRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTF 122
F I++ + WNA+L G A P +S + + + + T S ALK C
Sbjct: 374 FDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCC----V 428
Query: 123 SEATQIHSQVLRFGFDAXXXXXXXXXXXYAKT---------------------------- 154
+E Q+HS ++R G++ YAK
Sbjct: 429 TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 155 ----GDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
G + K+ + + D SWN I+ ++ E I LFK M + RP+ T
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLD-MNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
+ LS CS+L L G +HG I + VCN +IDMY KCG + VF+
Sbjct: 549 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR 608
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
K+LITW +I ++G G +AL+ + G PD VS+++ L AC H G+V+EG+
Sbjct: 609 -EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGM 667
Query: 330 RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTY 389
LF MK V+P M HY VDLL R G +KEA I MP D +W++ L +
Sbjct: 668 GLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRF 727
Query: 390 G 390
Sbjct: 728 A 728
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 157/369 (42%), Gaps = 35/369 (9%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA 106
LC L A Q+F + S WN ++ L + + ++R + R +
Sbjct: 156 LCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTE 215
Query: 107 LTCSFALKG--CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVF 164
+ LKG C + L S+ Q+H + G D Y K G+ A+++F
Sbjct: 216 SSFLGVLKGVSCVKDLDISK--QLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMF 273
Query: 165 DEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALK 224
+ DI SWNA+I A+ P +A+ LF M E G+ PN T + L S + L
Sbjct: 274 QDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLS 333
Query: 225 QGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAF 284
G +HG ++ + +++ NA+ID Y+KCG ++ + F + K+++ WN ++ +
Sbjct: 334 CGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR-DKNIVCWNALLSGY 392
Query: 285 AMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN-------HAGLVEEGVRLFDLMKG 337
A N DG L L QM G P ++ AL +C H+ +V G D +
Sbjct: 393 A-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLS 451
Query: 338 SVVKPNMKHY---------------GSVVDL------LGRAGRIKEAYDTINSMPMLPDV 376
S+++ K+ SVV L R G+ E+ I+++ PD
Sbjct: 452 SLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQ-PDT 510
Query: 377 VLWQSLLGA 385
V W + A
Sbjct: 511 VSWNIAIAA 519
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 99/224 (44%), Gaps = 1/224 (0%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
+ ++ ++ P T WN + + S + I ++ + +S + D T L C++
Sbjct: 498 SVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSK 557
Query: 119 ALTFSEATQIHSQVLRFGFD-AXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
+ + IH + + F A Y K G + + KVF+E ++++ +W A
Sbjct: 558 LCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTA 617
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+IS L EA+ FK G++P+ V+ + L+AC G +K+G + + D
Sbjct: 618 LISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYG 677
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
++ + +D+ ++ G++ +A + + M W T +
Sbjct: 678 VEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y K G++ A KVFD+MP+R+ S+N +I G ++ ++A +F M+ G+ PN TV
Sbjct: 59 YEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTV 118
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDM-NVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
G LS C+ L ++ G +HG + L M + V ++ +Y + ++ A VF++M
Sbjct: 119 SGLLS-CASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMP 176
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAAL 316
KSL TWN M+ G + + ++ G S+L L
Sbjct: 177 -FKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVL 222
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 190/404 (47%), Gaps = 4/404 (0%)
Query: 58 FAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCA 117
+A +F +++ WN ++ + S A+ + + + D T S + C+
Sbjct: 187 YALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICS 246
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
S+ Q + ++ GF + ++K LD + K+F E+ K D N+
Sbjct: 247 DLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNS 306
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
MI + +A+ LF + RP+ T LS+ + + L G VH ++
Sbjct: 307 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLG 365
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
D++ V ++++MY K G VD A VF K LI WNT+IM A N ++L +
Sbjct: 366 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTD-GKDLIFWNTVIMGLARNSRAVESLAIF 424
Query: 298 DQMALD-GVHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLG 355
+Q+ ++ + PD V+ + L AC +AG V EG+++F M K V P +HY +++LL
Sbjct: 425 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 484
Query: 356 RAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVL 415
R G I EA D + +P P +W+ +L AS G+ +AE ++ ++E S +++
Sbjct: 485 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 544
Query: 416 LSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKF 459
L +Y RW + ++R AM ++ G S I+ + F
Sbjct: 545 LIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 115/236 (48%), Gaps = 10/236 (4%)
Query: 153 KTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVT--V 210
K G L+ A +FDEMP+RD+ SWN MISGL I +F M+ RP + T +
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLD-MNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
L +L C ++ GE +HG + + N++V N+V+DMY + G D A SVF M
Sbjct: 142 LASLVTC-----VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
+ +++WN +I++ + +G+ ALD M + PD + + C+ + +G
Sbjct: 197 -DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGK 255
Query: 330 RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+ L N G+ +D+ + R+ ++ + D VL S++G+
Sbjct: 256 QALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKW-DSVLCNSMIGS 310
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 10/283 (3%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSF--AL 113
L+ A +F + WN ++ GL I + + R + T S +L
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXX-XXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
C R QIH + G Y + G D A VF M RD+
Sbjct: 146 VTCVR-----HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
SWN +I + A+ F M+E +P++ TV +S CS L L +G+
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
+ N IV A IDM+SKC +D + +F+ + S++ N+MI +++ + G
Sbjct: 261 CIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC-NSMIGSYSWHCCGED 319
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
AL L V PD ++ + L + N A +++ G + L+
Sbjct: 320 ALRLFILAMTQSVRPDKFTFSSVLSSMN-AVMLDHGADVHSLV 361
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 192/397 (48%), Gaps = 30/397 (7%)
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
EA+ + ++ +G+ + + +LG C + AL+ +VH I+ +V NA+I
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 250 DMYSKCGFVDKAYSVFQNMSCTKSLITWNT-----MIMAFAMNGDGYKALDLLDQMALDG 304
+MYS C VD A VF+ M WN+ M+ F NG G +A+DL + +G
Sbjct: 162 EMYSGCCSVDDALKVFEEMP------EWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEG 215
Query: 305 VHPDAVSYLAALCACNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
P+ + C G V+EG F M + + P+M+HY SV +L +G + EA
Sbjct: 216 NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEA 275
Query: 364 YDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAAR 423
+ + MPM P V +W++L+ S+ +G+VE+ + + +LVE + D V + + A +
Sbjct: 276 LNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCA-ELVEKLDATRLDKVSSAGLVATK 334
Query: 424 QRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEIYAKMDEIKFRI 483
VK+ R P F T F D SHP IY + ++ ++
Sbjct: 335 AS-DFVKK------EPSTRSEPYFYST--------FRPVDSSHPQMNIIYETLMSLRSQL 379
Query: 484 KAYGYTAKTDLVLHDI-GEEDKDNALNYHSEKLAVAYGLISTVNGTPIQVIKNLRICGDC 542
K GY T I E+K+ Y E++AV L+ + + I ++ N+RI GDC
Sbjct: 380 KEMGYVPDTRYYRSLIMAMENKEQIFGYR-EEIAVVESLLKSKPRSAITLLTNIRIVGDC 438
Query: 543 HTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
H ++K++S I R++I RD + FK GVC C + W
Sbjct: 439 HDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 6/202 (2%)
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
K C + A +H ++ Y+ +D A KVF+EMP+ +
Sbjct: 127 KLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSG 186
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
+ M+ EAI LF R KEEG +PN S C+ G +K+G + +
Sbjct: 187 TLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAM 246
Query: 234 VDE-KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGD--- 289
E + ++ ++V M + G +D+A + + M S+ W T++ ++GD
Sbjct: 247 YREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVEL 306
Query: 290 GYKALDLLDQMALDGVHPDAVS 311
G + +L+++ LD D VS
Sbjct: 307 GDRCAELVEK--LDATRLDKVS 326
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 208/417 (49%), Gaps = 15/417 (3%)
Query: 41 RTKLLEL---CAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSV 97
R+ LL L C A L F + R + + WNA++ G + + S ++ +
Sbjct: 151 RSALLSLYARCGKMEEARLQFDSMKERDLVS-----WNAMIDGYTANACADTSFSLFQLM 205
Query: 98 SRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL 157
+K D T L+ +++H ++ GF Y K G L
Sbjct: 206 LTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSL 265
Query: 158 DAAQKVFDEMPKRDIASWNAMISGLAQGSR-PNEAIALFKRMKEEGWRPNDVTVLGALSA 216
A K+ + KRD+ S A+I+G +Q + ++A +FK M + ++V V L
Sbjct: 266 ANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKI 325
Query: 217 CSQLGALKQGEIVHGYIV-DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI 275
C+ + ++ G +HG+ + ++ +V + N++IDMY+K G ++ A F+ M K +
Sbjct: 326 CTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVR 384
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
+W ++I + +G+ KA+DL ++M + + P+ V++L+ L AC+H G E G +++D M
Sbjct: 385 SWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTM 444
Query: 336 -KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDV--VLWQSLLGASKTYGNV 392
++ +H ++D+L R+G ++EAY I S + + W + L A + +GNV
Sbjct: 445 INKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNV 504
Query: 393 EMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMI-TKDVRKVPGFS 448
+++++A+ +L+ M +++ L++VYAA W + R+ M + K PG+S
Sbjct: 505 QLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Query: 112 ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD 171
ALK C+ + IH + GF + Y K GD+ A+K+FD + KRD
Sbjct: 18 ALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRD 77
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
+ SW AMIS ++ +A+ LFK M E + N T L +C LG LK+G +HG
Sbjct: 78 VVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG 137
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGY 291
+ N+IV +A++ +Y++CG +++A F +M + L++WN MI + N
Sbjct: 138 SVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMIDGYTANACAD 196
Query: 292 KALDLLDQMALDGVHPDAVSY 312
+ L M +G PD ++
Sbjct: 197 TSFSLFQLMLTEGKKPDCFTF 217
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 144/344 (41%), Gaps = 4/344 (1%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
D+ A ++F RI W A++ + A+ ++ + R K + T L
Sbjct: 61 GDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVL 120
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
K C E QIH V + YA+ G ++ A+ FD M +RD+
Sbjct: 121 KSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLV 180
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
SWNAMI G + + + +LF+ M EG +P+ T L A + L+ +HG
Sbjct: 181 SWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLA 240
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFA-MNGDGYK 292
+ + + ++++ Y KCG + A+ + + + L++ +I F+ N
Sbjct: 241 IKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTK-KRDLLSCTALITGFSQQNNCTSD 299
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDL-MKGSVVKPNMKHYGSVV 351
A D+ M D V + L C V G ++ +K S ++ ++ S++
Sbjct: 300 AFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLI 359
Query: 352 DLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
D+ ++G I++A M DV W SL+ +GN E A
Sbjct: 360 DMYAKSGEIEDAVLAFEEMKE-KDVRSWTSLIAGYGRHGNFEKA 402
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
L AL CS KQ ++HG + N+ + + +ID+Y K G V A +F +S
Sbjct: 16 LKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS- 74
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+ +++W MI F+ G AL L +M + V + +Y + L +C G ++EG++
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+ ++ N+ +++ L R G+++EA +SM D+V W +++
Sbjct: 135 IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKE-RDLVSWNAMI 186
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 202/407 (49%), Gaps = 31/407 (7%)
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
L + + EA+ + ++++G+ + +LG C ++ AL++ +VH I +
Sbjct: 86 ALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP----L 141
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
+ + VI+MYS C D A +VF M ++ TW TMI A NG+G +A+D+ +
Sbjct: 142 DARSYHTVIEMYSGCRSTDDALNVFNEMP-KRNSETWGTMIRCLAKNGEGERAIDMFTRF 200
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMK---GSVVKPNMKHYGSVVDLLGRA 357
+G PD + A AC G + EG+ F+ M G V+ +M+ Y +V+++L
Sbjct: 201 IEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVL--SMEDYVNVIEMLAAC 258
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMAS---RKL--VEMGSNSCGD 412
G + EA D + M + P V +W++L+ G +E+ + + +KL M S
Sbjct: 259 GHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAG 318
Query: 413 FVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHPNWKEI 472
V +A ++ +++ + MI D +K ++H+F GD SH
Sbjct: 319 LVAAKASDSAMEKLKELRYCQ--MIRDDPKK-----------RMHEFRAGDTSHLG---T 362
Query: 473 YAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQV 532
+ +K ++ G+ T + + EE+K+ L + S KLA A+ +I++ P+ V
Sbjct: 363 VSAFRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTV 422
Query: 533 IKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
++N+R C D H K+IS I R +I RD+ ++ +K GVCSC DYW
Sbjct: 423 LQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
Y+ D A VF+EMPKR+ +W MI LA+ AI +F R EEG +P+
Sbjct: 153 YSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIF 212
Query: 211 LGALSACSQLGALKQGEI-VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
AC +G + +G + D + +++ VI+M + CG +D+A + M+
Sbjct: 213 KAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMT 272
Query: 270 CTKSLITWNTMI 281
S+ W T++
Sbjct: 273 VEPSVEMWETLM 284
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 192/400 (48%), Gaps = 12/400 (3%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
WN + G + A++ + ++ ++ LK C+ H V+
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 134 R---FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNE 190
R F D Y++ DL A VF ++ +++WN++ISG A R E
Sbjct: 348 RSCSFSHD-IDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 191 AIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMN-VIVCNAVI 249
L K M G+ PN +T+ L +++G L+ G+ H YI+ + + +I+ N+++
Sbjct: 407 TSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 250 DMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDA 309
DMY+K G + A VF +M + +T+ ++I + G G AL M G+ PD
Sbjct: 467 DMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 310 VSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTIN 368
V+ +A L AC+H+ LV EG LF M+ ++ ++HY +VDL RAG + +A D +
Sbjct: 526 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 369 SMPMLPDVVLWQSLLGASKTYGNVEMAEMASRK-LVEMGSNSCGDFVLLSNVYAARQRWH 427
++P P + +LL A +GN + E A+ K L+E G ++LL+++YA W
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 428 DVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHP 467
+ V+ + V+K F+ E D + ++G+ + P
Sbjct: 646 KLVTVKTLLSDLGVQKAHEFALMETDSE----LDGENNKP 681
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 172/414 (41%), Gaps = 48/414 (11%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIF---RRIQNPSTNDWNAVLR 79
+QL AH I++G + +L A +L AQ I +P WN ++
Sbjct: 103 QQLHAHCISSG---LEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP--WNVLIG 157
Query: 80 GLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDA 139
+ + +++S Y+ + + D T +K CA L F+ +H +
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC 217
Query: 140 XXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMK 199
Y + G +D A+++FD M +RD SWNA+I+ + EA L RM
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 200 EEG-------W----------------------------RPNDVTVLGALSACSQLGALK 224
G W R V ++ L ACS +GALK
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 225 QGEIVHGYIVDEKLDMNVI--VCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
G++ H ++ + I V N++I MYS+C + A+ VFQ + SL TWN++I
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE-ANSLSTWNSIIS 396
Query: 283 AFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF-DLMKGSVVK 341
FA N + LL +M L G HP+ ++ + L G ++ G +++ K
Sbjct: 397 GFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYK 456
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ + S+VD+ ++G I A +SM D V + SL+ G E+A
Sbjct: 457 DCLILWNSLVDMYAKSGEIIAAKRVFDSMRK-RDKVTYTSLIDGYGRLGKGEVA 509
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L C F Q+H+ + G + Y+ LD AQ + +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
WN +I + R E+++++KRM +G R ++ T + AC+ L G +VHG
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
I N+ VCNA+I MY + G VD A +F MS + ++WN +I + +
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS-ERDAVSWNAIINCYTSEEKLGE 268
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAG 323
A LLD+M L GV V++ C AG
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 119/243 (48%), Gaps = 6/243 (2%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S +DL A +F++++ S + WN+++ G A + + + + + S + +T +
Sbjct: 368 SRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLA 427
Query: 111 FALKGCARALTFSEATQIHSQVLRF-GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
L AR + H +LR + YAK+G++ AA++VFD M K
Sbjct: 428 SILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRK 487
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
RD ++ ++I G + + A+A FK M G +P+ VT++ LSACS +++G +
Sbjct: 488 RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWL 547
Query: 230 HG---YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAM 286
++ +L + C ++D+Y + G++DKA +F + S T++ A +
Sbjct: 548 FTKMEHVFGIRLRLEHYSC--MVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLI 605
Query: 287 NGD 289
+G+
Sbjct: 606 HGN 608
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 192/400 (48%), Gaps = 12/400 (3%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
WN + G + A++ + ++ ++ LK C+ H V+
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 134 R---FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNE 190
R F D Y++ DL A VF ++ +++WN++ISG A R E
Sbjct: 348 RSCSFSHD-IDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEE 406
Query: 191 AIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMN-VIVCNAVI 249
L K M G+ PN +T+ L +++G L+ G+ H YI+ + + +I+ N+++
Sbjct: 407 TSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 250 DMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDA 309
DMY+K G + A VF +M + +T+ ++I + G G AL M G+ PD
Sbjct: 467 DMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 310 VSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTIN 368
V+ +A L AC+H+ LV EG LF M+ ++ ++HY +VDL RAG + +A D +
Sbjct: 526 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 369 SMPMLPDVVLWQSLLGASKTYGNVEMAEMASRK-LVEMGSNSCGDFVLLSNVYAARQRWH 427
++P P + +LL A +GN + E A+ K L+E G ++LL+++YA W
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 428 DVKRVREAMITKDVRKVPGFSYTEIDCKIHKFINGDQSHP 467
+ V+ + V+K F+ E D + ++G+ + P
Sbjct: 646 KLVTVKTLLSDLGVQKAHEFALMETDSE----LDGENNKP 681
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 172/414 (41%), Gaps = 48/414 (11%)
Query: 23 KQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIF---RRIQNPSTNDWNAVLR 79
+QL AH I++G + +L A +L AQ I +P WN ++
Sbjct: 103 QQLHAHCISSG---LEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLP--WNVLIG 157
Query: 80 GLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDA 139
+ + +++S Y+ + + D T +K CA L F+ +H +
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC 217
Query: 140 XXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMK 199
Y + G +D A+++FD M +RD SWNA+I+ + EA L RM
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 200 EEG-------W----------------------------RPNDVTVLGALSACSQLGALK 224
G W R V ++ L ACS +GALK
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 225 QGEIVHGYIVDEKLDMNVI--VCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIM 282
G++ H ++ + I V N++I MYS+C + A+ VFQ + SL TWN++I
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE-ANSLSTWNSIIS 396
Query: 283 AFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF-DLMKGSVVK 341
FA N + LL +M L G HP+ ++ + L G ++ G +++ K
Sbjct: 397 GFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYK 456
Query: 342 PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ + S+VD+ ++G I A +SM D V + SL+ G E+A
Sbjct: 457 DCLILWNSLVDMYAKSGEIIAAKRVFDSMRK-RDKVTYTSLIDGYGRLGKGEVA 509
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L C F Q+H+ + G + Y+ LD AQ + +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
WN +I + R E+++++KRM +G R ++ T + AC+ L G +VHG
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
I N+ VCNA+I MY + G VD A +F MS + ++WN +I + +
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS-ERDAVSWNAIINCYTSEEKLGE 268
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAG 323
A LLD+M L GV V++ C AG
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 119/243 (48%), Gaps = 6/243 (2%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S +DL A +F++++ S + WN+++ G A + + + + + S + +T +
Sbjct: 368 SRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLA 427
Query: 111 FALKGCARALTFSEATQIHSQVLRF-GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
L AR + H +LR + YAK+G++ AA++VFD M K
Sbjct: 428 SILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRK 487
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
RD ++ ++I G + + A+A FK M G +P+ VT++ LSACS +++G +
Sbjct: 488 RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWL 547
Query: 230 HG---YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAM 286
++ +L + C ++D+Y + G++DKA +F + S T++ A +
Sbjct: 548 FTKMEHVFGIRLRLEHYSC--MVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLI 605
Query: 287 NGD 289
+G+
Sbjct: 606 HGN 608
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 177/347 (51%), Gaps = 4/347 (1%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F + + WNA+L G + + +A+ + + + + +D +T + L C+
Sbjct: 348 ARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSG 407
Query: 119 ALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK-RDIASWNA 177
Q H + R G+D Y K G L +A F +M + RD SWNA
Sbjct: 408 ISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNA 467
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+++G+A+ R +A++ F+ M+ E +P+ T+ L+ C+ + AL G+ +HG+++ +
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDG 526
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
++V++ A++DMYSKC D A VF+ + T+ LI WN++I NG + +L
Sbjct: 527 YKIDVVIRGAMVDMYSKCRCFDYAIEVFKE-AATRDLILWNSIIRGCCRNGRSKEVFELF 585
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMKHYGSVVDLLGR 356
+ +GV PD V++L L AC G VE G + F M + P ++HY +++L +
Sbjct: 586 MLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCK 645
Query: 357 AGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLV 403
G + + + + MP P + + + A + Y ++ A+++L+
Sbjct: 646 YGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 175/406 (43%), Gaps = 68/406 (16%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRG-LAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
+S A ++F I NPS WN ++R L M + +++ + + + ++ T S +
Sbjct: 213 MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNH-TVSSVML 271
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE-------- 166
C+R+L IH+ ++ A Y K L++A++VFD+
Sbjct: 272 ACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKS 331
Query: 167 -----------------------MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW 203
MP+R+I SWNAM+ G +EA+ M++E
Sbjct: 332 WTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE 391
Query: 204 RPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYS 263
++VT++ L+ CS + ++ G+ HG+I D NVIV NA++DMY KCG + A
Sbjct: 392 NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANI 451
Query: 264 VFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN--- 320
F+ MS + ++WN ++ A G +AL + M ++ P + L C
Sbjct: 452 WFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIP 510
Query: 321 --------HAGLVEEGVRLFDLMKGSVV--------------------KPNMKHYGSVVD 352
H L+ +G ++ +++G++V ++ + S++
Sbjct: 511 ALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIR 570
Query: 353 LLGRAGRIKEAYD---TINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
R GR KE ++ + + + PD V + +L A G+VE+
Sbjct: 571 GCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELG 616
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 174/415 (41%), Gaps = 48/415 (11%)
Query: 19 LIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAAD---LSFAAQIFRRIQNPSTNDWN 75
++ +++Q+HL+T F P L AI + A ++F + WN
Sbjct: 77 VVQARKVQSHLVT-----FSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWN 131
Query: 76 AVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRF 135
AV+ A + + +R ++R + + + LK C L Q+H V+++
Sbjct: 132 AVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKY 191
Query: 136 GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALF 195
G+ Y K + A++VFDE+ SWN ++ + +EA+ +F
Sbjct: 192 GYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMF 251
Query: 196 KRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKC 255
+M E RP + TV + ACS+ AL+ G+++H V + + +V +V DMY KC
Sbjct: 252 FKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKC 311
Query: 256 GFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAA 315
++ A VF + + +K L +W + + +AM+G +A +L D M + VS+ A
Sbjct: 312 DRLESARRVF-DQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP----ERNIVSWNAM 366
Query: 316 LCACNHAGLVEEGVRLFDLMKGSV--------------------VKPNMKHYG------- 348
L HA +E + LM+ + V+ + +G
Sbjct: 367 LGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGY 426
Query: 349 --------SVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+++D+ G+ G ++ A M L D V W +LL G E A
Sbjct: 427 DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 26/197 (13%)
Query: 216 ACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI 275
+CS + Q V ++V + + N I+ Y KCG VD A +F+ M +
Sbjct: 70 SCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP-ERDGG 128
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
+WN +I A A NG + + +M DGV S+ L +C GL+ + +RL +
Sbjct: 129 SWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILD-LRLLRQL 184
Query: 336 KGSVVK----PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGN 391
+VVK N+ S+VD+ G+ + +A + + + P V W ++
Sbjct: 185 HCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIV-------- 235
Query: 392 VEMAEMASRKLVEMGSN 408
R+ +EMG N
Sbjct: 236 --------RRYLEMGFN 244
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 170/314 (54%), Gaps = 6/314 (1%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
+ K+GD + A +V +MP + +SWN +++G + EA F +M G R ++ ++
Sbjct: 264 FVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSL 323
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
L+A + L + G ++H LD V+V +A+IDMYSKCG + A +F M
Sbjct: 324 SIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP- 382
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG-VHPDAVSYLAALCACNHAGL-VEEG 328
K+LI WN MI +A NGD +A+ L +Q+ + + PD ++L L C+H + +E
Sbjct: 383 RKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVM 442
Query: 329 VRLFDLMKGSV-VKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASK 387
+ F++M +KP+++H S++ +G+ G + +A I D V W++LLGA
Sbjct: 443 LGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACS 502
Query: 388 TYGNVEMAEMASRKLVEMGSNSCGD--FVLLSNVYAARQRWHDVKRVREAMITKDVRKVP 445
+++ A+ + K++E+G + ++++SN+YA +RW +V ++R+ M V K
Sbjct: 503 ARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEV 562
Query: 446 GFSYTEIDCKIHKF 459
G S+ + K +
Sbjct: 563 GSSWIDSRTKCSSY 576
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 126/283 (44%), Gaps = 45/283 (15%)
Query: 127 QIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGS 186
Q+H V + GF + Y + L+ A KVFDEMP D+ SWN+++SG Q
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 187 RPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM-NVIVC 245
R E I LF + PN+ + AL+AC++L G +H +V L+ NV+V
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 246 NAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGV 305
N +IDMY KCGF+D A VFQ+M K ++WN ++ + + NG L QM
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQMP---- 250
Query: 306 HPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYD 365
+PD V+ Y ++D ++G A+
Sbjct: 251 NPDTVT-----------------------------------YNELIDAFVKSGDFNNAFQ 275
Query: 366 TINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSN 408
++ MP P+ W ++L Y N E + A+ +M S+
Sbjct: 276 VLSDMPN-PNSSSWNTILTG---YVNSEKSGEATEFFTKMHSS 314
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 12/270 (4%)
Query: 30 ITTGKFHFH----PSRTKLLELC-AISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMS 84
+ G + FH P EL A + D + A Q+ + NP+++ WN +L G S
Sbjct: 239 LELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNS 298
Query: 85 PQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXX 144
+ +A ++ + S + D + S L A + IH+ + G D+
Sbjct: 299 EKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVA 358
Query: 145 XXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGW- 203
Y+K G L A+ +F MP++++ WN MISG A+ EAI LF ++K+E +
Sbjct: 359 SALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFL 418
Query: 204 RPNDVTVLGALSACSQLGALKQGEIVHGY----IVDEKLDMNVIVCNAVIDMYSKCGFVD 259
+P+ T L L+ CS E++ GY I + ++ +V C ++I + G V
Sbjct: 419 KPDRFTFLNLLAVCSHCEV--PMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVW 476
Query: 260 KAYSVFQNMSCTKSLITWNTMIMAFAMNGD 289
+A V Q + W ++ A + D
Sbjct: 477 QAKQVIQEFGFGYDGVAWRALLGACSARKD 506
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 129/334 (38%), Gaps = 42/334 (12%)
Query: 59 AAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCAR 118
A ++F + +P WN+++ G S + + I + + RS + + + AL CAR
Sbjct: 109 AHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACAR 168
Query: 119 ALTFSEATQIHSQVLRFGFD-AXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
IHS++++ G + Y K G +D A VF M ++D SWNA
Sbjct: 169 LHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNA 228
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+++ ++ + + F +M PN TV
Sbjct: 229 IVASCSRNGKLELGLWFFHQM------PNPDTV--------------------------- 255
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLL 297
N +ID + K G + A+ V +M S +WNT++ + + +A +
Sbjct: 256 ------TYNELIDAFVKSGDFNNAFQVLSDMPNPNS-SSWNTILTGYVNSEKSGEATEFF 308
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRA 357
+M GV D S L A +V G + + + +++D+ +
Sbjct: 309 TKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKC 368
Query: 358 GRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGN 391
G +K A +MP ++++W ++ G+
Sbjct: 369 GMLKHAELMFWTMPR-KNLIVWNEMISGYARNGD 401
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 10/226 (4%)
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKE---EGWRPNDVTVLGALSACSQLGALKQGEIVH 230
SW+ ++ LA+ +I + + E +G +P+ ++ L G + +H
Sbjct: 23 SWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
GY+ N + N+++ Y ++ A+ VF M +I+WN+++ + +G
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP-DPDVISWNSLVSGYVQSGRF 137
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFD-LMKGSVVKPNMKHYGS 349
+ + L ++ V P+ S+ AAL AC L G + L+K + K N+
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNC 197
Query: 350 VVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
++D+ G+ G + +A M D V W +++ + G +E+
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHMEE-KDTVSWNAIVASCSRNGKLELG 242
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 166/341 (48%), Gaps = 39/341 (11%)
Query: 47 LCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA 106
+ + DL A + F R+ S WNA+L G A + A+ + + R + +
Sbjct: 205 ITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNE 264
Query: 107 LTCSFALKGCA----RALTFSEATQIHSQVLRF--------------------------- 135
T + C+ +LT S I + +R
Sbjct: 265 TTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNE 324
Query: 136 -GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIAL 194
G Y + GD+ +A+++FD MPKR++ SWN++I+G A + AI
Sbjct: 325 LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEF 384
Query: 195 FKRMKEEG-WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYS 253
F+ M + G +P++VT++ LSAC + L+ G+ + YI ++ +N ++I MY+
Sbjct: 385 FEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYA 444
Query: 254 KCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYL 313
+ G + +A VF M + ++++NT+ AFA NGDG + L+LL +M +G+ PD V+Y
Sbjct: 445 RGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYT 503
Query: 314 AALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
+ L ACN AGL++EG R+F S+ P HY + +DLL
Sbjct: 504 SVLTACNRAGLLKEGQRIFK----SIRNPLADHY-ACMDLL 539
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 168/475 (35%), Gaps = 101/475 (21%)
Query: 21 HIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRG 80
+ Q+ A LI + C A + IF + P+ N++ +
Sbjct: 21 QLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKY 80
Query: 81 LAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAX 140
+ + Y SR DA + +K R +A V + GF
Sbjct: 81 FSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQAL-----VEKLGFFKD 135
Query: 141 XXXXXXXXXXYAKTGDLDAAQKVFDE-------------------------------MPK 169
Y K +++A+KVFD+ MP+
Sbjct: 136 PYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPE 195
Query: 170 RDIAS-------------------------------WNAMISGLAQGSRPNEAIALFKRM 198
D+ S WNAM+SG AQ +A+ LF M
Sbjct: 196 NDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
Query: 199 KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFV 258
G RPN+ T + +SACS + I ++++ +N V A++DM++KC +
Sbjct: 256 LRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDI 315
Query: 259 DKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGV------------- 305
A +F + ++L+TWN MI + GD A L D M V
Sbjct: 316 QSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHN 375
Query: 306 -------------------HPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH 346
PD V+ ++ L AC H +E G + D ++ + +K N
Sbjct: 376 GQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSG 435
Query: 347 YGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGN-VEMAEMASR 400
Y S++ + R G + EA + M DVV + +L A G+ VE + S+
Sbjct: 436 YRSLIFMYARGGNLWEAKRVFDEMKE-RDVVSYNTLFTAFAANGDGVETLNLLSK 489
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 168/346 (48%), Gaps = 11/346 (3%)
Query: 23 KQLQAHLITTGKFHFHP-SRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGL 81
K++ AH++ + + P + L++L D++ ++F + + W A++ G
Sbjct: 336 KEVHAHVLKSKNYVEQPFVHSGLIDL--YCKCGDMASGRRVFYGSKQRNAISWTALMSGY 393
Query: 82 AMS---PQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFD 138
A + Q ++I W + P D +T + L CA + +IH L+ F
Sbjct: 394 AANGRFDQALRSIVWMQQEGFRP---DVVTIATVLPVCAELRAIKQGKEIHCYALKNLFL 450
Query: 139 AXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRM 198
Y+K G + ++FD + +R++ +W AMI + I +F+ M
Sbjct: 451 PNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLM 510
Query: 199 KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFV 258
RP+ VT+ L+ CS L ALK G+ +HG+I+ ++ + V +I MY KCG +
Sbjct: 511 LLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDL 570
Query: 259 DKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCA 318
A F ++ SL TW +I A+ N A++ +QM G P+ ++ A L
Sbjct: 571 RSANFSFDAVAVKGSL-TWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSI 629
Query: 319 CNHAGLVEEGVRLFDLM-KGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
C+ AG V+E R F+LM + ++P+ +HY V++LL R GR++EA
Sbjct: 630 CSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 159/348 (45%), Gaps = 7/348 (2%)
Query: 15 RCHSLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDW 74
R SL+H KQ+ H+ G RTKL+ + + + A ++F + + W
Sbjct: 123 RRKSLLHGKQVHVHIRINGLESNEFLRTKLVHM--YTACGSVKDAQKVFDESTSSNVYSW 180
Query: 75 NAVLRGLAMSPQP--TQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQV 132
NA+LRG +S + +S + + ++ + S K A A + + H+
Sbjct: 181 NALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALA 240
Query: 133 LRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAI 192
++ G Y K G + A++VFDE+ +RDI W AMI+GLA R EA+
Sbjct: 241 IKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEAL 300
Query: 193 ALFKRM-KEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM-NVIVCNAVID 250
LF+ M EE PN V + L + ALK G+ VH +++ K + V + +ID
Sbjct: 301 GLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLID 360
Query: 251 MYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAV 310
+Y KCG + VF S ++ I+W ++ +A NG +AL + M +G PD V
Sbjct: 361 LYCKCGDMASGRRVFYG-SKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVV 419
Query: 311 SYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
+ L C +++G + ++ PN+ S++ + + G
Sbjct: 420 TIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG 467
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 150/317 (47%), Gaps = 17/317 (5%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRS----PQKVDALTCSF 111
+ A ++F I W A++ GLA + + +A+ +R++ P V LT
Sbjct: 265 VGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSV-ILTTIL 323
Query: 112 ALKGCARALTFSEATQIHSQVLRF-GFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR 170
+ G +AL + ++H+ VL+ + Y K GD+ + ++VF +R
Sbjct: 324 PVLGDVKALKLGK--EVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
+ SW A++SG A R ++A+ M++EG+RP+ VT+ L C++L A+KQG+ +H
Sbjct: 382 NAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIH 441
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG 290
Y + NV + +++ MYSKCG + +F + +++ W MI + N D
Sbjct: 442 CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-QRNVKAWTAMIDCYVENCDL 500
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY--- 347
+++ M L PD+V+ L C+ + ++L + G ++K +
Sbjct: 501 RAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDL----KALKLGKELHGHILKKEFESIPFV 556
Query: 348 -GSVVDLLGRAGRIKEA 363
++ + G+ G ++ A
Sbjct: 557 SARIIKMYGKCGDLRSA 573
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 4/210 (1%)
Query: 104 VDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKV 163
V+A T S L+ C R + Q+H + G ++ Y G + AQKV
Sbjct: 109 VNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKV 168
Query: 164 FDEMPKRDIASWNAMISG--LAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG 221
FDE ++ SWNA++ G ++ R + ++ F M+E G N ++ + +
Sbjct: 169 FDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGAS 228
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
AL+QG H + L +V + +++DMY KCG V A VF + + ++ W MI
Sbjct: 229 ALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI-VERDIVVWGAMI 287
Query: 282 MAFAMNGDGYKALDLLDQM-ALDGVHPDAV 310
A N ++AL L M + + ++P++V
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSV 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Query: 58 FAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCA 117
+ ++F R++ + W A++ + I +R + S + D++T L C+
Sbjct: 471 YPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNA 177
++H +L+ F++ Y K GDL +A FD + + +W A
Sbjct: 531 DLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTA 590
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVD-E 236
+I +AI F++M G+ PN T LS CSQ G + + ++
Sbjct: 591 IIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMY 650
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLIT 276
L + + VI++ ++CG V++A + MS + SL T
Sbjct: 651 NLQPSEEHYSLVIELLNRCGRVEEAQRL-AVMSSSSSLQT 689
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 191 AIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVID 250
A+ + +++ G N T L AC + +L G+ VH +I L+ N + ++
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 251 MYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDG-YK-ALDLLDQMALDGVHPD 308
MY+ CG V A VF S + ++ +WN ++ ++G Y+ L +M GV +
Sbjct: 155 MYTACGSVKDAQKVFDE-STSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLN 213
Query: 309 AVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL---GRAGRIKEAYD 365
S + A + +G++ L + + ++ S+VD+ G+ G + +D
Sbjct: 214 VYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFD 273
Query: 366 TINSMPMLPDVVLWQSLLGA 385
I D+V+W +++
Sbjct: 274 EIVER----DIVVWGAMIAG 289
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 161/330 (48%), Gaps = 2/330 (0%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
+L+ A + F ++ W AV+ + +AI + + + T L
Sbjct: 232 GELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSIL 291
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA 173
K C+ Q+HS V++ YAK G++ +KVFD M R+
Sbjct: 292 KACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTV 351
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
+W ++I+ A+ EAI+LF+ MK N++TV+ L AC +GAL G+ +H I
Sbjct: 352 TWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQI 411
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKA 293
+ ++ NV + + ++ +Y KCG A++V Q + ++ +++W MI + G +A
Sbjct: 412 IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGCSSLGHESEA 470
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDL 353
LD L +M +GV P+ +Y +AL AC ++ + G + + K + N+ +++ +
Sbjct: 471 LDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHM 530
Query: 354 LGRAGRIKEAYDTINSMPMLPDVVLWQSLL 383
+ G + EA+ +SMP ++V W++++
Sbjct: 531 YAKCGFVSEAFRVFDSMPE-KNLVSWKAMI 559
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 3/285 (1%)
Query: 42 TKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSP 101
T L+++ A ++S ++F + N +T W +++ A +AIS +R + R
Sbjct: 323 TSLMDMYA--KCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH 380
Query: 102 QKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQ 161
+ LT L+ C ++H+Q+++ + Y K G+ A
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF 440
Query: 162 KVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG 221
V ++P RD+ SW AMISG + +EA+ K M +EG PN T AL AC+
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMI 281
+L G +H NV V +A+I MY+KCGFV +A+ VF +M K+L++W MI
Sbjct: 501 SLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Query: 282 MAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVE 326
M +A NG +AL L+ +M +G D + L C L E
Sbjct: 560 MGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 169/354 (47%), Gaps = 4/354 (1%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRS-VSRSPQKVDALTCSFA 112
DL +A ++F + +T W A++ G +A + + V + +
Sbjct: 131 GDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCL 190
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L C+R F Q+H +++ G YA+ G+L +A + FD M ++D+
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDV 249
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
SW A+IS ++ +AI +F M + PN+ TV L ACS+ AL+ G VH
Sbjct: 250 ISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSL 309
Query: 233 IVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYK 292
+V + +V V +++DMY+KCG + VF MS ++ +TW ++I A A G G +
Sbjct: 310 VVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWTSIIAAHAREGFGEE 368
Query: 293 ALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVD 352
A+ L M + + ++ ++ L AC G + G L + + ++ N+ ++V
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 353 LLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
L + G ++A++ + +P DVV W +++ + G+ A +++++ G
Sbjct: 429 LYCKCGESRDAFNVLQQLPS-RDVVSWTAMISGCSSLGHESEALDFLKEMIQEG 481
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 4/270 (1%)
Query: 127 QIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGS 186
+IH+ L+ D + GDL A+KVFD MP+++ +W AMI G +
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 187 RPNEAIALFKRMKEEGWR-PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVC 245
+EA ALF+ + G R N+ + L+ CS+ + G VHG +V + N+IV
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVE 221
Query: 246 NAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGV 305
++++ Y++CG + A F M K +I+W +I A + G G KA+ + M
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMME-EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 306 HPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYD 365
P+ + + L AC+ + G ++ L+ ++K ++ S++D+ + G I +
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 366 TINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+ M + V W S++ A G E A
Sbjct: 341 VFDGMSN-RNTVTWTSIIAAHAREGFGEEA 369
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 79/107 (73%)
Query: 473 YAKMDEIKFRIKAYGYTAKTDLVLHDIGEEDKDNALNYHSEKLAVAYGLISTVNGTPIQV 532
Y K+ + ++ GY +T VLHDI EE K+ AL +HSE+LA+A+G+I+T GT I+V
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRV 192
Query: 533 IKNLRICGDCHTVIKIISNIYNREIIVRDRARFGRFKGGVCSCGDYW 579
+KNLRICGDCH IKI+S+I +REIIVRD RF F+ G CSCGDYW
Sbjct: 193 MKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 184/403 (45%), Gaps = 7/403 (1%)
Query: 51 SPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
S DLS + + F + WN+++ A ++ + + ++
Sbjct: 260 SACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFM 319
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFD-AXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
L C+R QIH VL+ GFD + Y K ++ + ++ +P
Sbjct: 320 SFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPC 379
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVT---VLGALSACSQLGALKQG 226
++ N++++ L + I +F M +EG ++VT VL ALS S +L
Sbjct: 380 LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSL-SLPESLHSC 438
Query: 227 EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAM 286
+VH + +V V ++ID Y+K G + + VF + T ++ ++I +A
Sbjct: 439 TLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELD-TPNIFCLTSIINGYAR 497
Query: 287 NGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSV-VKPNMK 345
NG G + +L +M + PD V+ L+ L C+H+GLVEEG +FD ++ + P K
Sbjct: 498 NGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRK 557
Query: 346 HYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
Y +VDLLGRAG +++A + D V W SLL + + + N + A+ L+ +
Sbjct: 558 LYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNL 617
Query: 406 GSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
+ ++ +S Y + +++RE ++++ + G+S
Sbjct: 618 EPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYS 660
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 3/241 (1%)
Query: 153 KTGDLDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLG 212
K+G+L +A + FDEM RD+ ++N +ISG ++ AI L+ M G R + T
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 213 ALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK 272
LS CS ++G VH ++ N+ V +A++ +Y+ VD A +F M +
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM-LDR 176
Query: 273 SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF 332
+L N ++ F G+ + ++ +M L+GV + ++Y + C+H LV EG +L
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 333 DL-MKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGN 391
L +K N+ +VD G + + + N++P DV+ W S++ YG+
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE-KDVISWNSIVSVCADYGS 295
Query: 392 V 392
V
Sbjct: 296 V 296
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 140/324 (43%), Gaps = 5/324 (1%)
Query: 53 AADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFA 112
+ +L A + F + +N ++ G + +AI Y + + A T
Sbjct: 59 SGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSV 118
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI 172
L C+ L E Q+H +V+ GF YA +D A K+FDEM R++
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
A N ++ Q ++ RM+ EG N +T + CS + +G+ +H
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 233 IVDEKLDM-NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGY 291
+V ++ N+ V N ++D YS CG + + F N K +I+WN+++ A G
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSF-NAVPEKDVISWNSIVSVCADYGSVL 297
Query: 292 KALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG--VRLFDLMKGSVVKPNMKHYGS 349
+LDL +M G P +++ L C+ ++ G + + L G V ++ +
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVS-SLHVQSA 356
Query: 350 VVDLLGRAGRIKEAYDTINSMPML 373
++D+ G+ I+ + S+P L
Sbjct: 357 LIDMYGKCNGIENSALLYQSLPCL 380
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 151/344 (43%), Gaps = 16/344 (4%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQ---PTQAISWYRSVSRSPQKVDALTCSFA 112
LS + F+ ++++ A L+GL + +A W+ +D +
Sbjct: 120 LSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAII 179
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP---- 168
+ + S A + + + GF +A +G A VF +M
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 169 KRDIASWNAMISGLAQGSRP-NEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ-G 226
K + ++N +++ + P N+ +L ++MK +G P D L C + G+L Q
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAP-DAYTYNTLITCCKRGSLHQEA 298
Query: 227 EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMA 283
V + + + NA++D+Y K +A V M + S++T+N++I A
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 284 FAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPN 343
+A +G +A++L +QMA G PD +Y L AG VE + +F+ M+ + KPN
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 344 MKHYGSVVDLLGRAGRIKEA---YDTINSMPMLPDVVLWQSLLG 384
+ + + + + G G+ E +D IN + PD+V W +LL
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 157/392 (40%), Gaps = 21/392 (5%)
Query: 68 NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQ 127
+PS +N+++ A +A+ ++ K D T + L G RA A
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRDIASWNAMISGLA 183
I ++ G Y G K+FDE+ DI +WN +++
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 184 QGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVI 243
Q +E +FK MK G+ P T +SA S+ G+ +Q V+ ++D + ++
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
N V+ ++ G +++ V M C + +T+ +++ A+A NG + L +
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEE 584
Query: 301 ALDGV-HPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGR 359
GV P AV + C+ L+ E R F +K P++ S+V + GR
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 360 IKEAYDTINSMP---MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLL 416
+ +A ++ M P + + SL+ + +E R+++ G D +
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP--DIISY 702
Query: 417 SNV---YAARQRWHDVKRV----REAMITKDV 441
+ V Y R D R+ R + I DV
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/370 (18%), Positives = 144/370 (38%), Gaps = 46/370 (12%)
Query: 47 LCAISPAADLSFAAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQ 102
L A + A IF ++N P+ +NA ++ + T+ + + ++
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 103 KVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQK 162
D +T + L + SE + + ++ R GF Y++ G + A
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 163 VFDEM----PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSA-- 216
V+ M D++++N +++ LA+G ++ + M++ +PN++T L A
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 217 ---------------------------------CSQLGALKQGEIVHGYIVDEKLDMNVI 243
CS+ L + E + + ++
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
N+++ +Y + V KA V M T S+ T+N+++ + + D K+ ++L ++
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
G+ PD +SY + A + + R+F M+ S + P++ Y + +
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750
Query: 361 KEAYDTINSM 370
+EA + M
Sbjct: 751 EEAIGVVRYM 760
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 151/326 (46%), Gaps = 48/326 (14%)
Query: 124 EATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRDIASWNAMI 179
EA Q S+++ G D Y + DLD+A KVF+EMP +R+ ++ +I
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295
Query: 180 SGLAQGSRPNEAIALF-----------------------------------KRMKEEGWR 204
GL R +EA+ LF K M+E G +
Sbjct: 296 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 205 PNDVTVLGAL-SACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYS 263
PN T + S CSQ K E++ G ++++ L NVI NA+I+ Y K G ++ A
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELL-GQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 264 VFQNMSCTK---SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACN 320
V + M K + T+N +I + + +KA+ +L++M V PD V+Y + +
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 321 HAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP---MLPDVV 377
+G + RL LM + P+ Y S++D L ++ R++EA D +S+ + P+VV
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 378 LWQSLLGASKTYGNVEMAEMASRKLV 403
++ +L+ G V+ A + K++
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKML 559
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 121/294 (41%), Gaps = 8/294 (2%)
Query: 65 RIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSE 124
R +P+T +N +++G S +A+ + D +T + + G R+ F
Sbjct: 422 RKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 125 ATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMIS 180
A ++ S + G K+ ++ A +FD + ++ ++ + A+I
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
G + + +EA + ++M + PN +T + G LK+ ++ +V L
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNM--SCTK-SLITWNTMIMAFAMNGDGYKALDLL 297
V +I K G D AYS FQ M S TK T+ T I + G A D++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVV 351
+M +GV PD +Y + + G + M+ + +P+ + S++
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 129/317 (40%), Gaps = 49/317 (15%)
Query: 59 AAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
A +F ++++ P+ + +++ L S + ++A++ + + + K + T + +
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA- 173
F +A ++ Q+L G Y K G ++ A V + M R ++
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 174 ---SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
++N +I G + S ++A+ + +M E P+ VT
Sbjct: 427 NTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTY-------------------- 465
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI----TWNTMIMAFAM 286
N++ID + G D AY + M+ + L+ T+ +MI +
Sbjct: 466 ---------------NSLIDGQCRSGNFDSAYRLLSLMN-DRGLVPDQWTYTSMIDSLCK 509
Query: 287 NGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKH 346
+ +A DL D + GV+P+ V Y A + AG V+E + + M PN
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 347 YGSVVDLLGRAGRIKEA 363
+ +++ L G++KEA
Sbjct: 570 FNALIHGLCADGKLKEA 586
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 103/235 (43%), Gaps = 7/235 (2%)
Query: 214 LSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKA---YSVFQNMSC 270
L++ ++ G + + + V+ ++++K+ N+ N +++ Y K G V++A S
Sbjct: 190 LNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGL 249
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
T+ ++IM + D A + ++M L G + V+Y + A ++E +
Sbjct: 250 DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMD 309
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP---MLPDVVLWQSLLGASK 387
LF MK P ++ Y ++ L + R EA + + M + P++ + L+ +
Sbjct: 310 LFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369
Query: 388 TYGNVEMAEMASRKLVEMG-SNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDV 441
+ E A +++E G + + L N Y R D V E M ++ +
Sbjct: 370 SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 154/354 (43%), Gaps = 10/354 (2%)
Query: 68 NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQ 127
P+ + VL+ + S Q A+ R + K+DA+ S + G + + A
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLA 183
+ +++ GF A + G D K+ +M KR D+ +++A+I
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 184 QGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVI 243
+ + EA L K M + G P+ VT + + L + + +V + N+
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
N +I+ Y K +D +F+ MS +T+NT+I F G A +L +M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
V PD VSY L G E+ + +F+ ++ S ++ ++ Y ++ + A ++
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 361 KEAYDTINSMPM---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCG 411
+A+D S+P+ PDV + ++G G++ A++ RK+ E G + G
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/392 (19%), Positives = 154/392 (39%), Gaps = 50/392 (12%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARAL 120
++ R P D++ + +A + Q + + + + T S + C R
Sbjct: 62 EMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCR 121
Query: 121 TFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRDIASWN 176
S A ++++ G++ G + A ++ D M K + + N
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181
Query: 177 AMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDE 236
A+++GL + ++A+ L RM E G++PN+VT L + G + + +
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC---TKSLITWNTMIMAFAMNG---DG 290
K+ ++ + + +ID K G +D A+++F M +I + T+I F G DG
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 291 YKAL--------------------------------DLLDQMALDGVHPDAVSYLAALCA 318
K L +L +M G+ PD V+Y + +
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 319 CNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM---LPD 375
+++ + DLM PN++ + +++ +A I + + M + + D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 376 VVLWQSLLGASKTYGNVEMA-----EMASRKL 402
V + +L+ G +E+A EM SR++
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 117/291 (40%), Gaps = 11/291 (3%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+ ++RG + + R + + D + S + + EA ++H +++
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRPN 189
+ G + K LD A + D M + +I ++N +I+G + + +
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
+ + LF++M G + VT + +LG L+ + + +V ++ +++ ++
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 250 DMYSKCGFVDKAYSVFQNMSCTK---SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVH 306
D G +KA +F+ + +K + +N +I A DL + L GV
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 307 PDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRA 357
PD +Y + G + E LF M+ PN G ++L RA
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN----GCTYNILIRA 571
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 158 DAAQKVFDEM----PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGA 213
D A +F EM P+ + ++ + S +A+ + + + L K+M+ +G N T+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 214 LSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ---NMSC 270
++ C + L G I+ + + + + +I+ G V +A + M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY---LAALCACNHAGLVEE 327
+LIT N ++ +NG A+ L+D+M G P+ V+Y L +C L E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 328 GVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM---LPDVVLWQSLL 383
+R + K +K + Y ++D L + G + A++ N M + D++++ +L+
Sbjct: 234 LLRKMEERK---IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 155/351 (44%), Gaps = 17/351 (4%)
Query: 59 AAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
AA+I ++ P +N ++ G + + A+S +S SP D +T + L+
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILR 212
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR---- 170
+ +A ++ ++L+ + + A K+ DEM R
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
D+ ++N +++G+ + R +EAI M G +PN +T L + G E +
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMN 287
++ + +V+ N +I+ + G + +A + + M C + +++N ++ F
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY 347
+A++ L++M G +PD V+Y L A G VE+ V + + + P + Y
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 348 GSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNVEMA 395
+V+D L +AG+ +A ++ M + PD + + SL+G G V+ A
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 128/309 (41%), Gaps = 7/309 (2%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P +N ++ G+ + +AI + + S + + +T + L+ + +A ++
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
+ +LR GF + G L A + ++MP+ + S+N ++ G +
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
+ + AI +RM G P+ VT L+A + G ++ + + + +I
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMSCT---KSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
N VID +K G KA + M IT+++++ + G +A+ +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
G+ P+AV++ + + + + + M KPN Y +++ L G K
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 362 EAYDTINSM 370
EA + +N +
Sbjct: 572 EALELLNEL 580
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 2/183 (1%)
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
E + M G P+ + + +LG ++ + + +VI N +I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 250 DMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDA 309
Y K G ++ A SV MS + ++T+NT++ + +G +A+++LD+M +PD
Sbjct: 180 SGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 310 VSYLAALCA-CNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTIN 368
++Y + A C +G V ++L D M+ P++ Y +V+ + + GR+ EA +N
Sbjct: 240 ITYTILIEATCRDSG-VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 369 SMP 371
MP
Sbjct: 299 DMP 301
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 123/243 (50%), Gaps = 10/243 (4%)
Query: 151 YAKTGDLDAAQKVFDEMPK----RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPN 206
YAK+GD+ + +VFD M + + ++N +I+GL + + +A+ + M G N
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 207 DVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ 266
+ T + + +G + + +E LD+++ A++ K G + A +V +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 267 NMSC---TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAG 323
MS ++ +N +I +A GD ++A DL+ QM +GV PD +Y + + AC+ AG
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 324 LVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA---YDTINSMPMLPDVVLWQ 380
+ + + M+ VKPN+K Y +++ RA ++A Y+ + +M + PD ++
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 381 SLL 383
LL
Sbjct: 839 CLL 841
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/353 (18%), Positives = 158/353 (44%), Gaps = 26/353 (7%)
Query: 39 PSRTKL-LELCAISPAADLSFAAQIFRRIQ----NPSTNDWNAVLRGLAMSPQPTQAISW 93
PSRT+ L + D+ A + F R++ P++ + +++ A+ +A+S
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 94 YRSVSRSPQKVDALTCSFALKGCARA-------LTFSEATQIHSQVLRFGFDAXXXXXXX 146
R + ++ +T S + G ++A F EA +IH +
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL-------NASIYGK 419
Query: 147 XXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEG 202
+ +T +++ A+ + EM + IA ++ M+ G + + + +FKR+KE G
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
+ P VT ++ +++G + + V + +E + N+ + +I+ + K A+
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 263 SVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
+VF++M +I +N +I AF G+ +A+ + +M P +++ +
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 320 NHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM 372
+G + + +FD+M+ P + + +++ L ++++A + ++ M +
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 18/259 (6%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIAS----WNAMISGLAQGSRPNEAIALFKRMKEEGWRPN 206
Y + GD+ A++ F+ M R I + ++I A G +EA++ ++MKEEG +
Sbjct: 319 YGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMS 378
Query: 207 DVTVLGALSACSQLGALKQGEIVHGYIVDE----KLDMNVIVCNAVIDMYSKCGFVDKAY 262
VT + S+ G + + Y DE +N + +I + + +++A
Sbjct: 379 LVTYSVIVGGFSKAGHAEAAD----YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 263 SVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCAC 319
++ + M + ++TM+ + M D K L + ++ G P V+Y +
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 320 NHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDV 376
G + + + + +MK VK N+K Y +++ + A+ M M PDV
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 377 VLWQSLLGASKTYGNVEMA 395
+L+ +++ A GN++ A
Sbjct: 555 ILYNNIISAFCGMGNMDRA 573
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 105/241 (43%), Gaps = 8/241 (3%)
Query: 36 HFHPSRTKLLELCAISPAADLSFAAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAI 91
H +RT + + + + D+ + ++F ++ P+ + +N ++ GL Q +A+
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 92 SWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXY 151
++ + + T + ++G A +A + +++ G D
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC 704
Query: 152 AKTGDLDAAQKVFDEMPKRDIAS----WNAMISGLAQGSRPNEAIALFKRMKEEGWRPND 207
K+G + +A V EM R+I +N +I G A+ EA L ++MK+EG +P+
Sbjct: 705 CKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDI 764
Query: 208 VTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQN 267
T +SACS+ G + + + + N+ +I +++ +KA S ++
Sbjct: 765 HTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEE 824
Query: 268 M 268
M
Sbjct: 825 M 825
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 152/343 (44%), Gaps = 14/343 (4%)
Query: 55 DLSFAAQIFRRIQNPSTN----DWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCS 110
DLS A ++ ++ + +N ++ GL + +A+ + ++ K D +T
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301
Query: 111 FALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAA----QKVFDE 166
+ G + F ++ ++L F K G ++ A ++V D
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361
Query: 167 MPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQG 226
++ +NA+I L +G + +EA LF RM + G RPNDVT + + G L
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 227 EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK---SLITWNTMIMA 283
G +VD L ++V N++I+ + K G + A M K +++T+ +++
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 284 FAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPN 343
+ G KAL L +M G+ P ++ L AGL+ + V+LF+ M VKPN
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 344 MKHYGSVVDLLGRAGRIKEAYDTINSMP---MLPDVVLWQSLL 383
Y +++ G + +A++ + M ++PD ++ L+
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 12/267 (4%)
Query: 151 YAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPN 206
+ + G L+ A V EM +R D+ + +I G + L K M + G +P+
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 207 DVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY---S 263
DV + A S+ G K+ + +++E N + AVI+ K GFV++A S
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 264 VFQNMSCTKSLITWNTMIMAFAMNG-DGYKALDLLDQMALDGVHPDAVSYLAALCACNHA 322
Q +S + +T+ + D KA++L + + L G+ + +Y +
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQ 800
Query: 323 GLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP---MLPDVVLW 379
G +EE L M G V P+ Y ++++ L R +K+A + NSM + PD V +
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Query: 380 QSLLGASKTYGNVEMAEMASRKLVEMG 406
+L+ G + A +++ G
Sbjct: 861 NTLIHGCCVAGEMGKATELRNEMLRQG 887
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 11/252 (4%)
Query: 153 KTGDLDAAQKVFDEMPKRDI----ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDV 208
+ G + A K+F+EM + ++ ++N MI G + ++A K M E+G P+
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 209 TVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
+ + G + ++ + ++N I ++ + + G +++A SV Q M
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 269 ---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLV 325
L+ + +I + D LL +M G+ PD V Y + + A + G
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 326 EEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM-PM--LPDVVLWQSL 382
+E ++DLM PN Y +V++ L +AG + EA + M P+ +P+ V +
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 383 LGASKTYGNVEM 394
L T G V+M
Sbjct: 759 LDIL-TKGEVDM 769
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 130/338 (38%), Gaps = 46/338 (13%)
Query: 54 ADLSFAAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTC 109
D+S A + + + P T + ++ GL ++ Q ++A + + + +++ +
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 110 SFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
+ L G R EA + ++++ G D K D + EM
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 170 R----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ 225
R D + +MI ++ EA ++ M EG PN+VT ++ + G + +
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 226 GEIV---------------HGYIVD----EKLDM----------------NVIVCNAVID 250
E++ +G +D ++DM N N +I
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 251 MYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
+ + G +++A + M + IT+ TMI D KA++L + M G+ P
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 308 DAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMK 345
D V+Y + C AG + + L + M + PN K
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
++ + +A++ GL + A+ LF M G RP+ G + + +L L + + +
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMN 287
++ D+N++ N +ID K V +A + ++++ ++T+ T++
Sbjct: 251 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY 347
+ L+++D+M P + + + G +EE + L + V PN+ Y
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 348 GSVVDLLGRAGRIKEA---YDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVE 404
+++D L + + EA +D + + + P+ V + L+ G ++ A ++V+
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 405 MG 406
G
Sbjct: 431 TG 432
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 128/272 (47%), Gaps = 16/272 (5%)
Query: 151 YAKTGDLDAAQKVFDEM----PKRDIASWNAMISGLAQGSRP-NEAIALFKRMKEEGWRP 205
Y++TG + A +F+ M P + ++N ++ + R + + + M+ +G +
Sbjct: 220 YSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF 279
Query: 206 NDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVF 265
++ T LSAC++ G L++ + + + + NA++ ++ K G +A SV
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 266 QNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHA 322
+ M SC +T+N ++ A+ G +A +++ M GV P+A++Y + A A
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 323 GLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM---LPDVVLW 379
G +E ++LF MK + PN Y +V+ LLG+ R E + M P+ W
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 380 QSLLGASKTYGNVEMAEMASRKLVEMGSNSCG 411
++L GN M + +R EM SCG
Sbjct: 460 NTMLALC---GNKGMDKFVNRVFREM--KSCG 486
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 137/330 (41%), Gaps = 23/330 (6%)
Query: 58 FAAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
F ++FR +++ P + +N ++ A Y ++R+ T + L
Sbjct: 474 FVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALL 533
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI- 172
AR + + S + GF YAK G+ +++ + + + I
Sbjct: 534 NALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIF 593
Query: 173 ASW---------NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGAL 223
SW N LA R A LFK+ G++P+ V LS ++
Sbjct: 594 PSWMLLRTLLLANFKCRALAGSER---AFTLFKK---HGYKPDMVIFNSMLSIFTRNNMY 647
Query: 224 KQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK---SLITWNTM 280
Q E + I ++ L +++ N+++DMY + G KA + + + ++ L+++NT+
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 281 IMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVV 340
I F G +A+ +L +M G+ P +Y + G+ E + + M +
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC 767
Query: 341 KPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
+PN + VVD RAG+ EA D ++ +
Sbjct: 768 RPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 138/361 (38%), Gaps = 47/361 (13%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P T +NA+L+ + T+A+S + + + D++T + + RA EA +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
+ + G Y K G D A K+F M + + ++NA++S L +
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
SR NE I + MK G PN T L+ C G K V + + +
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 245 CNAVIDMYSKCGF---VDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
N +I Y +CG K Y + T+N ++ A A GD +++ M
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 302 LDGVHPDAVSYLAALCAC-----NHAGL------VEEGV--------------------- 329
G P SY + + C N+ G+ ++EG
Sbjct: 554 SKGFKPTETSY-SLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 330 ----RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSL 382
R F L K KP+M + S++ + R +A + S+ + PD+V + SL
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 383 L 383
+
Sbjct: 673 M 673
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 135/387 (34%), Gaps = 88/387 (22%)
Query: 103 KVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQK 162
K D TCS L CAR EA + +++ G++ + K G A
Sbjct: 278 KFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALS 337
Query: 163 VFDEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACS 218
V EM + D ++N +++ + EA + + M ++G PN +T
Sbjct: 338 VLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY-------- 389
Query: 219 QLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLI 275
VID Y K G D+A +F +M C +
Sbjct: 390 ---------------------------TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC 422
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
T+N ++ + + +L M +G P+ ++ L C + G+ + R+F M
Sbjct: 423 TYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Query: 336 KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
K +P+ + +++ GR G S + ASK YG + A
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCG----------------------SEVDASKMYGEMTRA 520
Query: 396 EMASRKLVEMGSNSC-GDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVP--------- 445
G N+C + L N A + W + V M +K +
Sbjct: 521 ----------GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570
Query: 446 ---GFSYTEIDCKIHKFINGDQSHPNW 469
G +Y I+ +I I Q P+W
Sbjct: 571 YAKGGNYLGIE-RIENRIKEGQIFPSW 596
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 132/316 (41%), Gaps = 21/316 (6%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P+T +NAVL L + + I + + + T + L C ++
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRV 478
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD----IASWNAMISGLAQ 184
++ GF+ Y + G A K++ EM + + ++NA+++ LA+
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG----------ALKQGEIVHGYIV 234
+ MK +G++P + + L ++ G +K+G+I +++
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598
Query: 235 DEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKAL 294
L + C A+ ++A+++F+ ++ +N+M+ F N +A
Sbjct: 599 LRTLLLANFKCRALAG-------SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAE 651
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
+L+ + DG+ PD V+Y + + G + + ++ S +KP++ Y +V+
Sbjct: 652 GILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 711
Query: 355 GRAGRIKEAYDTINSM 370
R G ++EA ++ M
Sbjct: 712 CRRGLMQEAVRMLSEM 727
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 18/260 (6%)
Query: 151 YAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPN 206
Y K G+ + A++V + K ++ S+ A++ +G + N A A+F+RM+ G P+
Sbjct: 156 YGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 215
Query: 207 DVTVLGALSACSQLGALKQGEIVHGYIVDEK---LDMNVIVCNAVIDMYSKCGFVDKAYS 263
+T L + K+ E V ++DEK L + + + +I MY K G +KA
Sbjct: 216 AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARK 275
Query: 264 VFQNM---SCTKSLITWNTMIMAFAMNGDGYKALD-LLDQMALDGVHPDAVSYLAALCAC 319
VF +M +S +T+N++ M+F + YK + + DQM + PD VSY + A
Sbjct: 276 VFSSMVGKGVPQSTVTYNSL-MSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAY 331
Query: 320 NHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDV 376
A EE + +F+ M + V+P K Y ++D +G +++A SM + PD+
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 391
Query: 377 VLWQSLLGASKTYGNVEMAE 396
+ ++L A ++E AE
Sbjct: 392 WSYTTMLSAYVNASDMEGAE 411
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 147/346 (42%), Gaps = 24/346 (6%)
Query: 68 NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQ 127
P+ + A++ + A + +R + S + A+T LK F EA +
Sbjct: 178 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 237
Query: 128 IHSQVL---RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI----ASWNAMIS 180
+ +L + Y K G+ + A+KVF M + + ++N+++S
Sbjct: 238 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 297
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
+ E ++ +M+ +P+ V+ + A + A ++ E + + +E LD
Sbjct: 298 F---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR--ARREEEALS--VFEEMLDA 350
Query: 241 NV----IVCNAVIDMYSKCGFVDKAYSVFQNMSCTK---SLITWNTMIMAFAMNGDGYKA 293
V N ++D ++ G V++A +VF++M + L ++ TM+ A+ D A
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDL 353
++ +DG P+ V+Y + A VE+ + +++ M+ S +K N +++D
Sbjct: 411 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
Query: 354 LGRAGRIKEA---YDTINSMPMLPDVVLWQSLLGASKTYGNVEMAE 396
GR A Y + S + PD LL + T +E A+
Sbjct: 471 SGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 516
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
W +++ L ++A +LG E V + NVI A+++ Y + G + A
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 263 SVFQNMSCT---KSLITWNTMIMAFAMNGDGYKALDLLDQMALDG----VHPDAVSYLAA 315
++F+ M + S IT+ ++ F + GD +K + + + LD + PD Y
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTF-VEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 260
Query: 316 LCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPD 375
+ AG E+ ++F M G V + Y S++ + + YD + + PD
Sbjct: 261 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPD 320
Query: 376 VVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
VV + L+ K YG E A EM
Sbjct: 321 VVSYALLI---KAYGRARREEEALSVFEEM 347
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 18/260 (6%)
Query: 151 YAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPN 206
Y K G+ + A++V + K ++ S+ A++ +G + N A A+F+RM+ G P+
Sbjct: 149 YGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 208
Query: 207 DVTVLGALSACSQLGALKQGEIVHGYIVDEK---LDMNVIVCNAVIDMYSKCGFVDKAYS 263
+T L + K+ E V ++DEK L + + + +I MY K G +KA
Sbjct: 209 AITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARK 268
Query: 264 VFQNM---SCTKSLITWNTMIMAFAMNGDGYKALD-LLDQMALDGVHPDAVSYLAALCAC 319
VF +M +S +T+N++ M+F + YK + + DQM + PD VSY + A
Sbjct: 269 VFSSMVGKGVPQSTVTYNSL-MSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAY 324
Query: 320 NHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDV 376
A EE + +F+ M + V+P K Y ++D +G +++A SM + PD+
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDL 384
Query: 377 VLWQSLLGASKTYGNVEMAE 396
+ ++L A ++E AE
Sbjct: 385 WSYTTMLSAYVNASDMEGAE 404
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 147/346 (42%), Gaps = 24/346 (6%)
Query: 68 NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQ 127
P+ + A++ + A + +R + S + A+T LK F EA +
Sbjct: 171 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 230
Query: 128 IHSQVL---RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI----ASWNAMIS 180
+ +L + Y K G+ + A+KVF M + + ++N+++S
Sbjct: 231 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 290
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
+ E ++ +M+ +P+ V+ + A + A ++ E + + +E LD
Sbjct: 291 F---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGR--ARREEEALS--VFEEMLDA 343
Query: 241 NV----IVCNAVIDMYSKCGFVDKAYSVFQNMSCTK---SLITWNTMIMAFAMNGDGYKA 293
V N ++D ++ G V++A +VF++M + L ++ TM+ A+ D A
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDL 353
++ +DG P+ V+Y + A VE+ + +++ M+ S +K N +++D
Sbjct: 404 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
Query: 354 LGRAGRIKEA---YDTINSMPMLPDVVLWQSLLGASKTYGNVEMAE 396
GR A Y + S + PD LL + T +E A+
Sbjct: 464 SGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 509
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 203 WRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAY 262
W +++ L ++A +LG E V + NVI A+++ Y + G + A
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 263 SVFQNMSCT---KSLITWNTMIMAFAMNGDGYKALDLLDQMALD----GVHPDAVSYLAA 315
++F+ M + S IT+ ++ F + GD +K + + + LD + PD Y
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTF-VEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 253
Query: 316 LCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPD 375
+ AG E+ ++F M G V + Y S++ + + YD + + PD
Sbjct: 254 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPD 313
Query: 376 VVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
VV + L+ K YG E A EM
Sbjct: 314 VVSYALLI---KAYGRARREEEALSVFEEM 340
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 158/379 (41%), Gaps = 45/379 (11%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P ++ + G + + + A+ Y + S K++A TCS L + +A +I
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR------------------ 170
+ + G Y + GDL A+ + M K+
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 171 ---------------------DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVT 209
+ ++N +I G + ++ + K M++ G PN V
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN-VV 495
Query: 210 VLGALSACSQLGA-LKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM 268
G L C G+ L + +IV + D + V + N +ID G ++ A+ + M
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 269 ---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLV 325
+L+T+NT+I +M G +A DLL +++ G+ PD +Y + + AG V
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNV 615
Query: 326 EEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSLLGA 385
+ + L++ MK S +KP +K Y ++ L + G I+ M + PD++++ +L
Sbjct: 616 QRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHC 674
Query: 386 SKTYGNVEMAEMASRKLVE 404
+G++E A ++++E
Sbjct: 675 YAVHGDMEKAFNLQKQMIE 693
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/442 (19%), Positives = 176/442 (39%), Gaps = 54/442 (12%)
Query: 50 ISPAADLSFAAQ---IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDA 106
IS AADL FA + I+ PS++ +L L + Q I+ + ++ S +
Sbjct: 125 ISEAADLFFALRNEGIY-----PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSK 179
Query: 107 LTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDE 166
A++ + + ++ +++ K ++ A+++FDE
Sbjct: 180 FMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 167 MPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGA 222
M R + ++N +I G + P ++ + +RMK + P+ +T L + G
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 223 LKQGE--------------------IVHGYIVDEK---------------LDMNVIVCNA 247
++ E + GY +EK + MN C+
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 248 VIDMYSKCGFVDKAYSVF-QNMS--CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG 304
+++ K G ++KA + + M+ + + +NTMI + GD A ++ M G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 305 VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAY 364
+ PD ++Y + G +E + + MK V P+++ Y ++ GR + +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 365 DTINSMP---MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG-SNSCGDFVLLSNVY 420
D + M +P+VV + +L+ + A++ R + + G S + +L +
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 421 AARQRWHDVKRVREAMITKDVR 442
++ + D R + M+ K +
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIE 561
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 126/294 (42%), Gaps = 33/294 (11%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR-- 170
+ GC +A + ++L+ G + + TG L A+ + E+ ++
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 171 --DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
D+ ++N++ISG IAL++ MK G +P T +S C++ G E+
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI----EL 651
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSL----ITWNTMIMAF 284
+ L +++V N V+ Y+ G ++KA+++ + M KS+ T+N++I+
Sbjct: 652 TERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQM-IEKSIGLDKTTYNSLILGQ 710
Query: 285 AMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNM 344
G + L+D+M + P+A +Y +V+ + D M V M
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNI---------IVKGHCEVKDYMSAYVWYREM 761
Query: 345 KHYGSVVDL---------LGRAGRIKEAYDTINSMP--MLPDVVLWQSLLGASK 387
+ G ++D+ L R KEA I+ M ML DV + + L K
Sbjct: 762 QEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTVDEDLSATEK 815
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 153/385 (39%), Gaps = 46/385 (11%)
Query: 54 ADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFAL 113
A+ F + RR+ PS +N ++ G + P ++ + + +T + L
Sbjct: 233 AEQLFDEMLARRLL-PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 114 KGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVF----DEMPK 169
KG +A +A + ++ GF Y+ +AA V+ D K
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVK 351
Query: 170 RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV 229
+ + + +++ L + + +A + R +G PN+V + + G L +
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMK 411
Query: 230 HGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAM 286
+ + + + + N +I + + G ++ A M + S+ T+N +I +
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Query: 287 NGDGYKALDLLDQMALDGVHPDAVSYLAAL-CACNHAGLVE--------------EGVRL 331
+ K D+L +M +G P+ VSY + C C + L+E VR+
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 332 FDLM------KGSV--------------VKPNMKHYGSVVDLLGRAGRIKEAYD---TIN 368
++++ KG + ++ N+ Y +++D L G++ EA D I+
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 369 SMPMLPDVVLWQSLLGASKTYGNVE 393
+ PDV + SL+ GNV+
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQ 616
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 189/434 (43%), Gaps = 53/434 (12%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWY-RSVSRSPQKVDALTCSFALK 114
++ Q+F P+T +N ++ GL + + ++A++ R V+R Q D T +
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP-DLFTYGTVVN 228
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR---- 170
G + A + ++ + +A +++ A +F EM +
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE--- 227
++ ++N++I L R ++A L M E PN VT + A + G L + E
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 228 -----------------IVHGYIVDEKLDM---------------NVIVCNAVIDMYSKC 255
+++G+ + ++LD NV+ N +I + K
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 256 GFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
V++ +F+ MS + +T+NT+I GD A + +M DGV PD ++Y
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 313 LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM 372
L G +E+ + +F+ ++ S ++P++ Y +++ + +AG++++ +D S+ +
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 373 ---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS-NSCGDFVLLSNVYAARQRWHD 428
P+V+++ +++ G E A+ R++ E G+ + G + L R R D
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL-----IRARLRD 583
Query: 429 VKRVREAMITKDVR 442
+ A + K++R
Sbjct: 584 GDKAASAELIKEMR 597
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 125/299 (41%), Gaps = 42/299 (14%)
Query: 151 YAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPN 206
+ + L A V +M K DI + +++++G G R +EA+AL +M ++PN
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 207 DVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ 266
VT ++HG + K V A+ID G
Sbjct: 185 TVTF---------------NTLIHGLFLHNKASEAV----ALIDRMVARG---------- 215
Query: 267 NMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCA-CNHAGLV 325
C L T+ T++ GD AL LL +M + D V Y + A CN+ V
Sbjct: 216 ---CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN-V 271
Query: 326 EEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSL 382
+ + LF M ++PN+ Y S++ L GR +A ++ M + P+VV + +L
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 383 LGASKTYGNVEMAEMASRKLVEMGSN-SCGDFVLLSNVYAARQRWHDVKRVREAMITKD 440
+ A G + AE ++++ + + L N + R + K + E MI+KD
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 125/274 (45%), Gaps = 8/274 (2%)
Query: 61 QIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARAL 120
++ +R +P +++++ G M + +A + + + +T + +KG +A
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 121 TFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWN 176
E ++ ++ + G + GD D AQK+F +M DI +++
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 177 AMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDE 236
++ GL + + +A+ +F+ +++ P+ T + + G ++ G + + +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 237 KLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI---TWNTMIMAFAMNGDGYKA 293
+ NVI+ +I + + G ++A ++F+ M +L T+NT+I A +GD +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEE 327
+L+ +M G DA S ++ + H G +E+
Sbjct: 590 AELIKEMRSCGFVGDA-STISMVINMLHDGRLEK 622
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 137/302 (45%), Gaps = 7/302 (2%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P+ +N V+ GL + + ++R +D +T + +KG + F +A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA----SWNAMISGLAQ 184
H+++LR G K G+++ A + D+M R + ++ ++ G +Q
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
NEA + + M + G+ P+ VT ++ G ++ V + ++ L +V+
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
+ V+ + + VD+A V + M IT++++I F +A DL ++M
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
G+ PD +Y A + A G +E+ ++L + M V P++ Y +++ L + R +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 362 EA 363
EA
Sbjct: 573 EA 574
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 165/374 (44%), Gaps = 29/374 (7%)
Query: 156 DLDAAQKVFDEMPKRDIA----SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVL 211
++ A+ VF EM + ++ ++N +I G + A+ LF +M+ +G PN VT
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244
Query: 212 GALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS-- 269
+ +L + G + + + L+ N+I N VI+ + G + + V M+
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 270 -CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEG 328
+ +T+NT+I + G+ ++AL + +M G+ P ++Y + + + AG +
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 329 VRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP---MLPDVVLWQSLLGA 385
+ D M+ + PN + Y ++VD + G + EAY + M P VV + +L+
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 386 SKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVK---RVREAMITKDVR 442
G +E A + E G + D V S V + R +DV RV+ M+ K +
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSP--DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI- 481
Query: 443 KVPGFSYTEIDCKIHKFINGDQSHPNWKE---IYAKMDEIKFRIKAYGYTAKTDLVLHDI 499
K +Y+ + I G KE +Y +M + + YTA L+
Sbjct: 482 KPDTITYSSL-------IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA---LINAYC 531
Query: 500 GEEDKDNALNYHSE 513
E D + AL H+E
Sbjct: 532 MEGDLEKALQLHNE 545
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 170/403 (42%), Gaps = 21/403 (5%)
Query: 18 SLIHIKQLQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQ----NPSTND 73
S++H+ Q AH G ++ +L+ I ++SFA +F+ + +P+
Sbjct: 155 SIVHLAQ--AHGFMPGVLSYNA----VLD-ATIRSKRNISFAENVFKEMLESQVSPNVFT 207
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+N ++RG + A++ + + + +T + + G + + ++ +
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRPN 189
G + + G + V EM +R D ++N +I G + +
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
+A+ + M G P+ +T + + + G + + + L N ++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 250 DMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVH 306
D +S+ G++++AY V + M+ + S++T+N +I + G A+ +L+ M G+
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 307 PDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDT 366
PD VSY L + V+E +R+ M +KP+ Y S++ R KEA D
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 367 INSM---PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
M + PD + +L+ A G++E A ++VE G
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 108/267 (40%), Gaps = 27/267 (10%)
Query: 68 NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQ 127
+P ++ VL G S +A+ R + K D +T S ++G EA
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLA 183
++ ++LR G Y GDL+ A ++ +EM ++ D+ +++ +I+GL
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 184 QGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVI 243
+ SR EA L ++ E P+DVT + CS + ++ G+ +
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK-------- 618
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
G + +A VF++M + +N MI GD KA L +M
Sbjct: 619 ------------GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEE 327
G V+ +A + A + G V E
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNE 693
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 146/348 (41%), Gaps = 10/348 (2%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P+ + VL + S Q A+ R + K+DA+ S + G + + A +
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
+++ G + G D K+ +M KR ++ +++ +I +
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
+ EA L K M G P+ +T + + L + + +V + D N+
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
N +I+ Y K +D +F+ MS +T+NT+I F G A +L +M
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
V P+ V+Y L G E+ + +F+ ++ S ++ ++ Y ++ + A ++
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 362 EAYDTINSMPM---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+A+D S+P+ P V + ++G G + AE+ RK+ E G
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 125/310 (40%), Gaps = 8/310 (2%)
Query: 62 IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT 121
+ +R NP+ ++ ++ + +A ++ + D +T + + G +
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNA 177
+A Q+ ++ G D Y K +D ++F +M R D ++N
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+I G + + N A LF+ M PN VT L G ++ + I K
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKAL 294
+++++ + N +I VD A+ +F ++ + T+N MI G +A
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
L +M DG PD +Y + A G + V+L + +K + V+D+L
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Query: 355 GRAGRIKEAY 364
GR+K+++
Sbjct: 624 S-DGRLKKSF 632
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 127/295 (43%), Gaps = 11/295 (3%)
Query: 158 DAAQKVFDEM----PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGA 213
D A +F +M P + ++ + S +A+ + + +AL K+M+ +G N T+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 214 LSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ---NMSC 270
++ + L G I+ + N I + +I+ G V +A + M
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
LIT NT++ ++G +A+ L+D+M G P+AV+Y L +G +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM---LPDVVLWQSLLGASK 387
L M+ +K + Y ++D L + G + A++ N M M +++ + L+G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 388 TYGNVEMAEMASRKLVEMGSN-SCGDFVLLSNVYAARQRWHDVKRVREAMITKDV 441
G + R +++ N + F +L + + + + + + + MI + +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 155/349 (44%), Gaps = 19/349 (5%)
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKV-DALTCSFALKGCARALTFSEATQIHSQVL 133
N ++ G + A+++ + +S D T + + G +A A +I +L
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA----SWNAMISGLAQGSRPN 189
+ G+D K G++ A +V D+M RD + ++N +IS L + ++
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK----LDMNVIVC 245
EA L + + +G P DV +L Q L + V + +E + +
Sbjct: 383 EATELARVLTSKGILP-DVCTFNSLI---QGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 246 NAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMAL 302
N +ID G +D+A ++ + M C +S+IT+NT+I F +A ++ D+M +
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 303 DGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKE 362
GV ++V+Y + + VE+ +L D M KP+ Y S++ R G IK+
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 363 AYDTINSMPM---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSN 408
A D + +M PD+V + +L+ G VE+A R + G N
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 123/312 (39%), Gaps = 11/312 (3%)
Query: 68 NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQ 127
+P +N+V+ GL + +A+ + + +T + + + EAT+
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLA 183
+ + G T + A ++F+EM + D ++N +I L
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 184 QGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVI 243
+ +EA+ + K+M+ G + +T + + ++ E + + + N +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
N +ID K V+ A + M T+N+++ F GD KA D++ M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFD--LMKGSVVKPNMKHYGSVVDLLGRAG 358
+G PD V+Y + AG VE +L MKG + P+ Y V+ L R
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKR 624
Query: 359 RIKEAYDTINSM 370
+ EA + M
Sbjct: 625 KTTEAINLFREM 636
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 136/311 (43%), Gaps = 7/311 (2%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P+ + VL + S Q A+ R + K+DA+ S + G + + A +
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA----SWNAMISGLAQ 184
+++ GF A + G D K+ +M KR I+ +++ +I +
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
+ EA L K M + G PN +T + + L++ + ++ + D +++
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
N +I+ Y K +D +F+ MS + +T+NT++ F +G A L +M
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
V PD VSY L G +E+ + +F ++ S ++ ++ Y ++ + A ++
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 362 EAYDTINSMPM 372
+A+D S+P+
Sbjct: 526 DAWDLFCSLPL 536
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 151/350 (43%), Gaps = 10/350 (2%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
S +I + P T +N +L GL + + ++A+ + K +T + + G
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI--- 172
S+A + +++ GF K+G A ++ +M +R+I
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 173 -ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
++ +I GL + + A LF M+ +G++ + +T + G G +
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNG 288
++ K+ NV+ + +ID + K G + +A + + M + IT+N++I F
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG 348
+A+ ++D M G PD +++ + A +++G+ LF M V N Y
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 349 SVVDLLGRAGRI---KEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
++V ++G++ K+ + + S + PD+V ++ LL G +E A
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 10/238 (4%)
Query: 158 DAAQKVFDEM----PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGA 213
D A +F +M P + +N + S +A+ + +AL K+M+ +G + T+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 214 LSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ---NMSC 270
++ + L G I+ + + ++ N +++ V +A + M
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
+LIT NT++ +NG A+ L+D+M G P+ V+Y L +G +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM---LPDVVLWQSLLGA 385
L M+ +K + Y ++D L + G + A++ N M + D++ + +L+G
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 151/343 (44%), Gaps = 45/343 (13%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
++ V+ L A++ + + + + +T S + +S+A+++ S ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRPN 189
+ + K G L A+K++DEM KR DI +++++I+G R +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
EA +F+ M + PN VT N +I
Sbjct: 383 EAKHMFELMISKDCFPNVVTY-----------------------------------NTLI 407
Query: 250 DMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVH 306
+ + K +D+ +F+ MS + +T+ T+I F D A + QM DGVH
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 307 PDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDT 366
P+ ++Y L G +E+ + +F+ ++ S ++P + Y +++ + +AG++++ +D
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 367 INSMPM---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
S+ + PDV+++ +++ G E A+ RK+ E G
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 139/332 (41%), Gaps = 12/332 (3%)
Query: 65 RIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSE 124
R + + D+ +LR S + AI + + +S + L A+ F
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 125 ATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK----RDIASWNAMIS 180
+ ++ R G + + + A + +M K I + +++++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 181 GLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDM 240
G G R ++A+AL +M E G+RP+ +T + + + +V
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK---SLITWNTMIMAFAMNGDGYKALDLL 297
N++ V++ K G +D A+++ M K +++ ++T+I + AL+L
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 298 DQMALDGVHPDAVSYLAAL-CACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGR 356
+M GV P+ ++Y + + C CN+ + RL M + PN+ + +++D +
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERW-SDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 357 AGRIKEA---YDTINSMPMLPDVVLWQSLLGA 385
G++ EA YD + + PD+ + SL+
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 150/350 (42%), Gaps = 10/350 (2%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L+ ++ + PS +++L G + + A++ + + D +T + + G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRD 171
SEA + ++++ G K GD+D A + ++M + +
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
+ ++ +I L + ++A+ LF M+ +G RPN +T +S +
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNG 288
+++ K++ NV+ NA+ID + K G + +A ++ M S + T++++I F M+
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG 348
+A + + M P+ V+Y + A ++EGV LF M + N Y
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 349 SVVDLLGRAGRIKEA---YDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+++ +A A + + S + P+++ + +LL G +E A
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 8/271 (2%)
Query: 47 LCAISPAADLS-FAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVD 105
LC +D S + + R NP+ +NA++ + +A Y + + D
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 106 ALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFD 165
T S + G EA + ++ + K +D ++F
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 166 EMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG 221
EM +R + ++ +I G Q + A +FK+M +G PN +T L + G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWN 278
L++ +V Y+ K++ + N +I+ K G V+ + +F ++S +I +N
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 279 TMIMAFAMNGDGYKALDLLDQMALDGVHPDA 309
TMI F G +A L +M DG PD+
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPDS 575
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 134/293 (45%), Gaps = 9/293 (3%)
Query: 89 QAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXX 148
Q ++ + R+ + D +T + L C+R + A + ++ +
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 149 XXYAKTGDLDAAQKVFDEMP-KR---DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWR 204
K G +D A ++ +MP KR ++ S++ +I G A+ R +EA+ LF M+ G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 205 PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSV 264
+ V+ LS +++G ++ + + + +V+ NA++ Y K G D+ V
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 265 FQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
F M +L+T++T+I ++ G +A+++ + G+ D V Y A + A
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 322 AGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTIN--SMPM 372
GLV V L D M + PN+ Y S++D GR+ + + D N S+P
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPF 614
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 138/323 (42%), Gaps = 46/323 (14%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARA-LTFSEATQIHSQV 132
++A++ S +AIS + S+ + + +T + + C + + F + + ++
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 133 LRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRP 188
R G ++ G +AA+ +FDEM R D+ S+N ++ + +G +
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 189 NEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAV 248
+ A + +M + PN V+ + V
Sbjct: 391 DLAFEILAQMPVKRIMPN-----------------------------------VVSYSTV 415
Query: 249 IDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGV 305
ID ++K G D+A ++F M +++NT++ + G +ALD+L +MA G+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 306 HPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA-- 363
D V+Y A L G +E ++F MK V PN+ Y +++D + G KEA
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 364 -YDTINSMPMLPDVVLWQSLLGA 385
+ S + DVVL+ +L+ A
Sbjct: 536 IFREFKSAGLRADVVLYSALIDA 558
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 10/241 (4%)
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG-ALKQGEIVH 230
+ +++A+IS + EAI++F MKE G RPN VT + AC + G KQ
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMN 287
+ + + I N+++ + S+ G + A ++F M+ + + ++NT++ A
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY 347
G A ++L QM + + P+ VSY + AG +E + LF M+ + + Y
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 348 GSVVDLLGRAGRIKEAYDTINSMPML---PDVVLWQSLLGASKTYGNVEMAEMASRKLVE 404
+++ + + GR +EA D + M + DVV + +LLG YG + + E
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG---YGKQGKYDEVKKVFTE 504
Query: 405 M 405
M
Sbjct: 505 M 505
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 100/246 (40%), Gaps = 49/246 (19%)
Query: 242 VIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKAL-DLL 297
V +A+I Y + G ++A SVF +M +L+T+N +I A G +K +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 298 DQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVK---------------- 341
D+M +GV PD +++ + L C+ GL E LFD M ++
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 342 -------------------PNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLP---DVVLW 379
PN+ Y +V+D +AGR EA + M L D V +
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 380 QSLLGASKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNV----YAARQRWHDVKRVREA 435
+LL Y V +E A L EM S V+ N Y + ++ +VK+V
Sbjct: 448 NTLL---SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 436 MITKDV 441
M + V
Sbjct: 505 MKREHV 510
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 158/375 (42%), Gaps = 11/375 (2%)
Query: 32 TGKFHFHPSRTKLL-ELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQA 90
+G H H R +L EL I S ++ + PS D+ VL +A +
Sbjct: 39 SGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIV 98
Query: 91 ISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXX 150
I Y + D + + + R S A + ++++ GF
Sbjct: 99 IYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG 158
Query: 151 YAKTGDLDAAQKVFDEMPK----RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPN 206
+ + A + D M ++ +N +I+GL + N A+ +F M+++G R +
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 218
Query: 207 DVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ 266
VT +S S G + +V K+D NVI A+ID + K G + +A ++++
Sbjct: 219 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYK 278
Query: 267 NM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAG 323
M S ++ T+N++I F ++G A + D M G PD V+Y + +
Sbjct: 279 EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 338
Query: 324 LVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQ 380
VE+G++LF M + + Y +++ +AG++ A N M + PD+V +
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 381 SLLGASKTYGNVEMA 395
LL G +E A
Sbjct: 399 ILLDCLCNNGKIEKA 413
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/321 (18%), Positives = 127/321 (39%), Gaps = 42/321 (13%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P+ +N V+ GL + A+ + + + + DA+T + + G + + +++A ++
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR------------------ 170
+++ D + K G+L A+ ++ EM +R
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 171 ---------------------DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVT 209
D+ ++N +I+G + R + + LF M +G + T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 210 VLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
+ Q G L + V +VD + +++ N ++D G ++KA + +++
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 270 CTK---SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVE 326
++ +IT+N +I +A L + GV PDA++Y+ + GL
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 327 EGVRLFDLMKGSVVKPNMKHY 347
E +L MK P+ + Y
Sbjct: 482 EADKLCRRMKEDGFMPSERIY 502
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 139/340 (40%), Gaps = 47/340 (13%)
Query: 113 LKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR-- 170
L G + F EA + + FGF K DL+ A +VF M K+
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 215
Query: 171 --DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEI 228
D ++N +ISGL+ R +A L + M + PN + + + G L +
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275
Query: 229 VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAF- 284
++ ++ + NV N++I+ + G + A +F M C ++T+NT+I F
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 335
Query: 285 ------------------AMNGDGYK----------------ALDLLDQMALDGVHPDAV 310
+ GD + A + ++M GV PD V
Sbjct: 336 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395
Query: 311 SYLAAL-CACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINS 369
+Y L C CN+ G +E+ + + + ++ S + ++ Y ++ L R ++KEA+ S
Sbjct: 396 TYNILLDCLCNN-GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 370 MP---MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ + PD + + +++ G A+ R++ E G
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 176/446 (39%), Gaps = 32/446 (7%)
Query: 41 RTKLLELCAISPAADLSFAAQIFRRIQNPSTN----DWNAVLRGLAMSPQPTQAISWYRS 96
R+ ++ L A + +IFRR+ + V+ GL + ++ +
Sbjct: 190 RSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKE 249
Query: 97 VSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGD 156
S K +A T + + + FS + + + G K G
Sbjct: 250 FSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGK 309
Query: 157 LDAAQKVFDEMPKRDIAS----WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLG 212
+ A+K+FDEM +R I S + ++IS + A LF + E+G P+ T
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGA 369
Query: 213 ALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKA---YSVFQNMS 269
+ ++G + EI+ + + +++ +V N +ID Y + G VD+A Y V +
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGV 329
+ T NT+ F +A L +M GV VSY + G VEE
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAK 489
Query: 330 RLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP---MLPDVVLWQSLLGAS 386
RLF M V+PN Y ++ + G+IKEA +M M PD + SL+
Sbjct: 490 RLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGE 549
Query: 387 KTYGNVEMAEMASRKLVEMG-----SNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDV 441
NV + A R EMG NS V++S + A + EA D
Sbjct: 550 CIADNV---DEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA-------GKSDEAFGLYDE 599
Query: 442 RKVPGFSYTEIDCKIHKFINGDQSHP 467
K G++ ID K++ + G P
Sbjct: 600 MKRKGYT---IDNKVYTALIGSMHSP 622
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 125/305 (40%), Gaps = 8/305 (2%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+N ++ GL A + + K D T + + +S+A+++ S +L
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR-----DIASWNAMISGLAQGSRP 188
+ + K G L A+K++DEM K D+ ++N +I G + R
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 189 NEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAV 248
E + +F+ M + G N VT + Q ++V +V + + +++ N +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 249 IDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGV 305
+D G V+ A VF+ M ++T+ TMI A G DL ++L GV
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 306 HPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYD 365
P+ V+Y + GL EE LF MK PN Y +++ R G + +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 366 TINSM 370
I M
Sbjct: 553 LIKEM 557
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 188/449 (41%), Gaps = 63/449 (14%)
Query: 54 ADLSFAAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTC 109
+ LS A I ++ PS N++L G + ++A++ + + D +T
Sbjct: 124 SQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 183
Query: 110 SFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
+ + G + SEA + +++ G K G+ D A + ++M K
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 170 ----RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ 225
D+ +N +I GL + ++A LF +M+ +G +P+ T +S G
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 226 GEIVHGYIVDEKLDMNVIVCNAVIDMYSK-------------------C----------- 255
+ ++++ ++ +++ NA+ID + K C
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 256 -GF-----VDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVH 306
GF V++ VF+ MS + +T+ T+I F D A + QM DGVH
Sbjct: 364 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Query: 307 PDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDT 366
PD ++Y L + G VE + +F+ M+ +K ++ Y ++++ L +AG++++ +D
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Query: 367 INSMPM---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSN----SCGDFVLLSNV 419
S+ + P+VV + +++ G + E A VEM + + G + L
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKG---LKEEADALFVEMKEDGPLPNSGTYNTL--- 537
Query: 420 YAARQRWHDVKRVREAMITKDVRKVPGFS 448
R R D A + K++R GF+
Sbjct: 538 --IRARLRDGDEAASAELIKEMRSC-GFA 563
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 154/378 (40%), Gaps = 22/378 (5%)
Query: 64 RRIQNPSTNDWNAVL-RGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTF 122
R S++D L R + + AI + + +S + S L A+ F
Sbjct: 32 RSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKF 91
Query: 123 SEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAM 178
+ Q+ G + + L A + +M K I + N++
Sbjct: 92 DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSL 151
Query: 179 ISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKL 238
++G G+R +EA+AL +M E G++P+ VT + Q + + +V +
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK---SLITWNTMIMAFAMNGDGYKALD 295
+++ AVI+ K G D A ++ M K ++ +NT+I A D
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 296 LLDQMALDGVHPDAVSYLAAL-CACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
L ++M G+ PD +Y + C CN+ G + RL M + P++ + +++D
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNY-GRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 355 GRAGRIKEA---YD-TINSMPMLPDVVLWQSLLGASKTYGNVE-----MAEMASRKLVEM 405
+ G++ EA YD + S PDVV + +L+ Y VE EM+ R LV
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV-- 388
Query: 406 GSNSCGDFVLLSNVYAAR 423
N+ L+ + AR
Sbjct: 389 -GNTVTYTTLIHGFFQAR 405
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 115/275 (41%), Gaps = 9/275 (3%)
Query: 47 LCAISPAADLS-FAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKV- 104
LC +D S + + + NP +NA++ + +A Y + +S
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 105 DALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVF 164
D + + +KG + E ++ ++ + G + + D D AQ VF
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 165 DEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQL 220
+M DI ++N ++ GL A+ +F+ M++ + + VT + A +
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 221 GALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI---TW 277
G ++ G + + + + NV+ ++ + + G ++A ++F M L T+
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 278 NTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY 312
NT+I A +GD + +L+ +M G DA ++
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 7/265 (2%)
Query: 184 QGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVI 243
Q + ++AI LF M + P+ V LSA +++ + + + + N+
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
+ I+ + + + A ++ M S++T N+++ F +A+ L+DQM
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
G PD V++ + E V L + M +P++ YG+V++ L + G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 361 KEAYDTINSMP---MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG-SNSCGDFVLL 416
A + +N M + DVV++ +++ Y +++ A K+ G + L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 417 SNVYAARQRWHDVKRVREAMITKDV 441
+ RW D R+ M+ K++
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNI 316
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 174/401 (43%), Gaps = 47/401 (11%)
Query: 57 SFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGC 116
S ++ + P T +N +++GL + + ++A+ + + + D +T + + G
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 117 ARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRDI 172
R+ S A + ++ A + G +DAA +F EM K +
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 173 ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGY 232
++N+++ GL + + N+ L K M PN +T L + G L++ ++
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 233 IVDEKLDMNVIVCNAVIDMY------------------SKC------------GF----- 257
++ + N+I N ++D Y +KC G+
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 258 VDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLA 314
VD VF+N+S + +T++ ++ F +G A +L +M GV PD ++Y
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 315 ALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP--- 371
L G +E+ + +F+ ++ S + + Y ++++ + + G++++A++ S+P
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 372 MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS--NSC 410
+ P+V+ + ++ G++ A + RK+ E G+ N C
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 123/291 (42%), Gaps = 11/291 (3%)
Query: 158 DAAQKVFDEM----PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGA 213
D A +F EM P + ++ S +A+ + N + K+++ G N T+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 214 LSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SC 270
++ + V G ++ + + N +I G V +A + M C
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 271 TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVR 330
++T+N+++ +GD ALDLL +M V D +Y + + G ++ +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASK 387
LF M+ +K ++ Y S+V L +AG+ + + M ++P+V+ + LL
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 388 TYGNVEMAEMASRKLVEMG-SNSCGDFVLLSNVYAARQRWHDVKRVREAMI 437
G ++ A ++++ G S + + L + Y + R + + + M+
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 101/248 (40%), Gaps = 36/248 (14%)
Query: 68 NPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQ 127
+P + ++++G M + + +R++S+ +A+T S ++G ++ A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 128 IHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD----IASWNAMISGLA 183
+ +++ G G L+ A ++F+++ K I + +I G+
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 184 QGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVI 243
+G + +A LF + +G +PN +T +S + G+L + I+ + ++
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG------ 538
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALD 303
NA D T+NT+I A +GD + L+++M
Sbjct: 539 --NAPND------------------------CTYNTLIRAHLRDGDLTASAKLIEEMKSC 572
Query: 304 GVHPDAVS 311
G DA S
Sbjct: 573 GFSADASS 580
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 11/243 (4%)
Query: 152 AKTGDLDAAQKVFDEMPK----RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPND 207
+ G LD +VFDEMP R + S+ A+I+ + R ++ L RMK E P+
Sbjct: 152 GREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSI 211
Query: 208 VTVLGALSACSQLGALKQGEI-VHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQ 266
+T ++AC++ G +G + + + E + +++ N ++ + G D+A VF+
Sbjct: 212 LTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFR 271
Query: 267 NMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAG 323
M+ L T++ ++ F K DLL +MA G PD SY L A +G
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSG 331
Query: 324 LVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGR---IKEAYDTINSMPMLPDVVLWQ 380
++E + +F M+ + PN Y +++L G++GR +++ + + S PD +
Sbjct: 332 SIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYN 391
Query: 381 SLL 383
L+
Sbjct: 392 ILI 394
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 134/337 (39%), Gaps = 81/337 (24%)
Query: 151 YAKTGDLDAAQKVFDEMPKRDIA----SWNAMISGLAQGSRPNEAI-ALFKRMKEEGWRP 205
Y + G + + ++ D M I+ ++N +I+ A+G E + LF M+ EG +P
Sbjct: 186 YGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQP 245
Query: 206 NDVTVLGALSACSQLGALKQGEIVH-----GYIVDE------------KLDMNVIVC--- 245
+ VT LSAC+ G + E+V G IV + KL VC
Sbjct: 246 DIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 246 ---------------NAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMN 287
N +++ Y+K G + +A VF M CT + T++ ++ F +
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQS 365
Query: 288 G---------------------------------DGY--KALDLLDQMALDGVHPDAVSY 312
G GY + + L M + + PD +Y
Sbjct: 366 GRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETY 425
Query: 313 LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM 372
+ AC GL E+ ++ M + + P+ K Y V++ G+A +EA N+M
Sbjct: 426 EGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHE 485
Query: 373 L---PDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ P + + SLL + G V+ +E +LV+ G
Sbjct: 486 VGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/451 (18%), Positives = 174/451 (38%), Gaps = 59/451 (13%)
Query: 44 LLELCAISPAADLSFAAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSR 99
LL CAI D A +FR + + P ++ ++ + + ++
Sbjct: 253 LLSACAIRGLGDE--AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 100 SPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDA 159
D + + L+ A++ + EA + Q+ G + ++G D
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 160 AQKVFDEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALS 215
+++F EM D A++N +I +G E + LF M EE P+ T G +
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 430
Query: 216 ACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTK 272
AC + G + + Y+ + + VI+ + + ++A F M
Sbjct: 431 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 490
Query: 273 SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF 332
S+ T+++++ +FA G ++ +L ++ G+ + ++ A + A G EE V+ +
Sbjct: 491 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Query: 333 DLMKGSVVKPNMKHYGSVVDLLGRAGRI---KEAYDTINSMPMLPDVVLWQSLLGASKTY 389
M+ S P+ + +V+ + A + +E ++ + + +LP ++ + +L
Sbjct: 551 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLA----- 605
Query: 390 GNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSY 449
VY +RW DV + E M++ V
Sbjct: 606 -----------------------------VYGKTERWDDVNELLEEMLSNRV-------- 628
Query: 450 TEIDCKIHKFINGD-QSHPNWKEIYAKMDEI 479
+ I I + I GD NW+ + +D++
Sbjct: 629 SNIHQVIGQMIKGDYDDDSNWQIVEYVLDKL 659
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 10/167 (5%)
Query: 248 VIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG 304
+I + + G +DK VF M ++S+ ++ +I A+ NG +L+LLD+M +
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 305 VHPDAVSYLAALCACNHAGLVEEGVR-LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
+ P ++Y + AC GL EG+ LF M+ ++P++ Y +++ G EA
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 364 ---YDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS 407
+ T+N ++PD+ + L+ +T+G + E L EM S
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLV---ETFGKLRRLEKVCDLLGEMAS 310
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 149/325 (45%), Gaps = 10/325 (3%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P T ++ ++ G + + ++A++ + Q+ D +T S + G SEA +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS----WNAMISGLAQ 184
+++ +GF K+G+ A +F +M +R+I + ++ +I L +
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
++A++LF M+ +G + + VT + G G + ++ + +V+
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
+A+ID++ K G + +A ++ M IT+N++I F ++A + D M
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI- 360
G PD V+Y + + A V++G+RLF + + PN Y ++V ++G++
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 361 --KEAYDTINSMPMLPDVVLWQSLL 383
KE + + S + P VV + LL
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILL 462
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 148/349 (42%), Gaps = 12/349 (3%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P + VL L S A+ +R + K + S + + +F +A +
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
+++ G A G D K+ EM R D+ +++A+I +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
+ EA L+ M G P+ +T + + L + + +V + + +++
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLI----TWNTMIMAFAMNGDGYKALDLLDQM 300
+ +I+ Y K VD +F+ +S +K LI T+NT+++ F +G A +L +M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREIS-SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
GV P V+Y L G + + + +F+ M+ S + + Y ++ + A ++
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 361 KEAYDTINSMP---MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+A+ S+ + PDVV + ++G G++ A+M RK+ E G
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 116/294 (39%), Gaps = 9/294 (3%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P ++A++ + +A Y + D +T + + G + EA Q+
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
++ G + Y K +D ++F E+ + + ++N ++ G Q
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
+ N A LF+ M G P+ VT L G L + + + ++ + + +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
N +I VD A+S+F ++S ++T+N MI G +A L +M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 302 LDGVHPDAVSYLAALCA-CNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
DG PD +Y + A +GL+ V L + MK + V+D+L
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISS-VELIEEMKVCGFSADSSTIKMVIDML 605
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 241 NVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKS---LITWNTMIMAFAMNGDGYKALDLL 297
+ I + +++ + G V +A ++ M K L+T +T+I + G +AL L+
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 298 DQMALDGVHPDAVSY---LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
D+M G PD V+Y L LC ++ L + LF M+ +K ++ Y V+D L
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSAL---ALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 355 GRAGRIKEAYDTINSMPM---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCG 411
+ G +A N M M DVV + SL+G G + R+++ G N
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI--GRNIIP 313
Query: 412 DFVLLS---NVYAARQRWHDVKRVREAMITKDV 441
D V S +V+ + + K + MIT+ +
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 156/371 (42%), Gaps = 50/371 (13%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P +N+++ GL+ + + +A S+ + + K +A T + G A F+ A +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
++ G Y K G + A + M + D ++ +++GL +
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGAL-SACSQLGALKQGEIVHGYIVDEKLDMNVI 243
+ ++A +F+ M+ +G P DV G L + S+LG +++ + +V+E L NVI
Sbjct: 605 NDKVDDAEEIFREMRGKGIAP-DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNMSCT---KSLITWNTMIMAFAMNGDGYKALDLLDQM 300
+ N ++ + + G ++KA + MS + +T+ T+I + +GD +A L D+M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFD--------------------------- 333
L G+ PD+ Y + C VE + +F
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 334 --------LMKGS---VVKPNMKHYGSVVDLLGRAGRI---KEAYDTINSMPMLPDVVLW 379
LM GS KPN Y ++D L + G + KE + + + ++P V+ +
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 380 QSLLGASKTYG 390
SLL G
Sbjct: 844 TSLLNGYDKMG 854
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 131/325 (40%), Gaps = 10/325 (3%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P + +++ G Q + + + T +KG + A I
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
+++ G + + A +V EM ++ DI +N++I GL++
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
R +EA + M E G +PN T +S + + + + + N ++
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMSCTKSL---ITWNTMIMAFAMNGDGYKALDLLDQMA 301
C +I+ Y K G V +A S +++M L T+ ++ N A ++ +M
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
G+ PD SY + + G +++ +FD M + PN+ Y ++ R+G I+
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 362 EAYDTINSMP---MLPDVVLWQSLL 383
+A + ++ M + P+ V + +++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTII 704
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/400 (17%), Positives = 158/400 (39%), Gaps = 28/400 (7%)
Query: 25 LQAHLITTGKFHFHPSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRGLAMS 84
L ++ TG + + + K++E C+ ++ + + + I + + ++ GL +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACS-------AYRSMVDQGILGDAKT-YTVLMNGLFKN 605
Query: 85 PQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXX 144
+ A +R + D + + G ++ +A+ I +++ G
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 145 XXXXXXYAKTGDLDAAQKVFDEMPKRDI----ASWNAMISGLAQGSRPNEAIALFKRMKE 200
+ ++G+++ A+++ DEM + + ++ +I G + EA LF MK
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 201 EGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDK 260
+G P+ + C +L +++ + G + + NA+I+ K G +
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 261 AYSVFQNMS-------CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYL 313
V + + +T+N MI G+ A +L QM + P ++Y
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 314 AALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM--- 370
+ L + G E +FD + ++P+ Y +++ + G +A ++ M
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 371 PMLPD-----VVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
+ D + ++LL G +E+AE +V +
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 156/357 (43%), Gaps = 9/357 (2%)
Query: 90 AISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXX 149
A+SW + + + D + S ++ R +S+A I S++ R G
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 150 XYAKTGDLDAAQKVFDEMPKRDI----ASWNAMISGLAQGSRPNEAIALFKRMKEEGWRP 205
Y K A+ + EM + + S++ ++S + + EA+++F MKE
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 206 NDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVF 265
+ T + QL +K+ + + + ++ NV+ N ++ +Y + +A +F
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 266 ---QNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHA 322
Q ++++T+NTMI + + KA +L+ +M G+ P+A++Y + A
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 323 GLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVVLWQSL 382
G ++ LF ++ S V+ + Y +++ R G + A ++ + LPD + ++
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK-LPDNIPRETA 507
Query: 383 LGASKTYGNVEMAEMASRKLVEMGS-NSCGDFVLLSNVYAARQRWHDVKRVREAMIT 438
+ G E A R+ E G F + N+Y+ QR+ +V V E M T
Sbjct: 508 ITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRT 564
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 159/367 (43%), Gaps = 49/367 (13%)
Query: 54 ADLSFAAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTC 109
D+ A + ++++ P +N ++ L A++ + + + + +T
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 110 SFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK 169
+ ++ +S+A+++ S ++ + + K G L A+K++DEM K
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 170 R----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQ 225
R DI +++++I+G R +EA +F+ M + PN VT
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY--------------- 399
Query: 226 GEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIM 282
N +I + K VD+ +F+ MS + +T+ T+I
Sbjct: 400 --------------------NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH 439
Query: 283 AFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKP 342
F + A + QM DGV PD ++Y L + G VE + +F+ ++ S ++P
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Query: 343 NMKHYGSVVDLLGRAGRIKEAYDTINSMPM---LPDVVLWQSLLGASKTYGNVEMAEMAS 399
++ Y +++ + +AG++++ +D S+ + P+VV + +++ G E A+
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 559
Query: 400 RKLVEMG 406
R++ E G
Sbjct: 560 REMKEEG 566
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 146/350 (41%), Gaps = 10/350 (2%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L+ A++ + P N++L G + + A+S + + D+ T + + G
Sbjct: 136 LAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS- 174
R SEA + +++ G K GD+D A + +M + I
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 175 ---WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
+N +I L N+A+ LF M +G RPN VT + G +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNG 288
+++ K++ NV+ +A+ID + K G + +A ++ M S + T++++I F M+
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG 348
+A + + M P+ V+Y + A V+EG+ LF M + N Y
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 349 SVVDLLGRAGRIKEA---YDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
+++ +A A + + S +LPD++ + LL G VE A
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 132/323 (40%), Gaps = 11/323 (3%)
Query: 59 AAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALK 114
A +F + N P+ +N+++R L + + A + + +T S +
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 115 GCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD--- 171
+ EA +++ ++++ D + LD A+ +F+ M +D
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 172 -IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
+ ++N +I G + R +E + LF+ M + G N VT + Q +IV
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK---SLITWNTMIMAFAMN 287
+V + + +++ + ++D G V+ A VF+ + +K + T+N MI
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY 347
G DL ++L GV P+ V+Y + GL EE LF MK P+ Y
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 348 GSVVDLLGRAGRIKEAYDTINSM 370
+++ R G + + I M
Sbjct: 575 NTLIRAHLRDGDKAASAELIREM 597
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 169/403 (41%), Gaps = 56/403 (13%)
Query: 34 KFHFHPSRTKLLEL----CAISPAAD-LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPT 88
K + P R + L C + +D +S ++ P +NA++ L + +
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 89 QAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXX 148
A +++ + R + + +T + + G + +S+A ++ S +++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 149 XXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWR 204
+ K G + A+++F+EM + DI +++++I+GL R +EA +F M +G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 205 PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSV 264
+ V+ N +I+ + K V+ +
Sbjct: 328 AD-----------------------------------VVSYNTLINGFCKAKRVEDGMKL 352
Query: 265 FQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
F+ MS + +T+NT+I F GD KA + QM G+ PD +Y L
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 322 AGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP---MLPDVVL 378
G +E+ + +F+ M+ + ++ Y +V+ + + G+++EA+ S+ + PD+V
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 379 WQSLLGASKTYGNVEMAEMASRKLVEMG--SNSC----GDFVL 415
+ +++ T G + E K+ + G N C GD L
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITL 515
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 141/322 (43%), Gaps = 7/322 (2%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
PS D++ VL +A S IS + + D + + + R F A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDL-DAAQKV--FDEMPKR-DIASWNAMISGLAQ 184
++++FG++ + + + DA V +EM R D+ +N +I G +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
N+A+ LF RM+ +G R + VT ++ G + +V + NVI
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMS--CTK-SLITWNTMIMAFAMNGDGYKALDLLDQMA 301
AVID++ K G +A +++ M+ C + T+N++I M+G +A +LD M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
G PD V+Y + + V+EG +LF M + + Y +++ +AGR
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 362 EAYDTINSMPMLPDVVLWQSLL 383
A + + M P++ + LL
Sbjct: 367 AAQEIFSRMDSRPNIRTYSILL 388
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 121/287 (42%), Gaps = 4/287 (1%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P +N ++ G A+ + + R + DA+T + + G + +S+A ++
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
++ + K G A K+++EM +R D+ ++N++I+GL
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
R +EA + M +G P+ VT ++ + + +G + + L + I
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDG 304
N +I Y + G D A +F M ++ T++ ++ MN KAL L + M
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 305 VHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVV 351
+ D +Y + G VE+ LF + +KP++ Y +++
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/375 (19%), Positives = 153/375 (40%), Gaps = 42/375 (11%)
Query: 74 WNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVL 133
+N V+ L + A+S + + + D +T S + G + +A + S++
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 134 RFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK----RDIASWNAMISGLAQGSRPN 189
GF K G ++ A ++FD M + D ++N++++GL R +
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 190 EAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVI 249
+A L + M PN +T + + G + ++ + +D +V N++I
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 250 DMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVH 306
+ G VD+A + M C ++T+NT+I F + + L +MA G+
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 307 PDAVSYLAALCACNHAGL--------------------------------VEEGVRLFDL 334
D ++Y + AG VE+ + LF+
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 335 MKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP---MLPDVVLWQSLLGASKTYGN 391
M+ S ++ ++ Y V+ + + G +++A+D S+ + PDVV + +++
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 392 VEMAEMASRKLVEMG 406
+ +++ RK+ E G
Sbjct: 467 WDKSDLLYRKMQEDG 481
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 246 NAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMAL 302
N VI+ +C A SV M ++T +++I F + A+DL+ +M
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 303 DGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKE 362
G PD V Y + GLV + V LFD M+ V+ + Y S+V L +GR +
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 363 AYDTINSMPM---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGSNSCGD-----FV 414
A + M M +P+V+ + +++ G A KL E + C D +
Sbjct: 228 AARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA----MKLYEEMTRRCVDPDVFTYN 283
Query: 415 LLSNVYAARQRWHDVKRVREAMITK 439
L N R + K++ + M+TK
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTK 308
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 152/360 (42%), Gaps = 13/360 (3%)
Query: 89 QAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXX 148
+++ ++ R D + C+ +KG +A ++ + +FG
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 149 XXYAKTGDLDAAQKVFDEMPKRDIA----SWNAMISGLAQGSRPNEAIALFKRMKEEGWR 204
+ K +D A +V D M +D + ++N MI L + + A+ + ++ + +
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 205 PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSV 264
P +T + A G + + + ++ L ++ N +I K G VD+A+ +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 265 FQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
+N+ C +I++N ++ A G + L+ +M + P+ V+Y +
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 322 AGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVL 378
G +EE + L LMK + P+ Y ++ R GR+ A + + +M LPD+V
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 379 WQSLLGASKTYGNVEMAEMASRKLVEMG--SNSCGDFVLLSNVYAARQRWHDVKRVREAM 436
+ ++L G + A KL E+G NS + S ++++ + + + E M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 107/213 (50%), Gaps = 5/213 (2%)
Query: 162 KVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG 221
K+F E ++ +++ +I+ L + + EA+ L K MKE+G P+ + ++A + G
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 222 ALKQG-EIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITW 277
L E + I D L +++ N V+ K G D+A +F + C+ + ++
Sbjct: 383 RLDVAIEFLETMISDGCLP-DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 278 NTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKG 337
NTM A +GD +AL ++ +M +G+ PD ++Y + + G+V+E L M+
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 338 SVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
P++ Y V+ +A RI++A + + SM
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 10/242 (4%)
Query: 152 AKTGDLDAAQKVFDEMPK----RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPND 207
+ A K+ DEM + + ++N +I + + NEA+ +F +M+E G +P+
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 208 VTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQN 267
VT + ++ G L ++ + L + + +I+ K G + A+ +F
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 268 M---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGL 324
M CT +L+T+N M+ A + AL L M G PD V+Y + H G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 325 VEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQS 381
+EE +F M+ P+ YG +VDL G+AG +++A+ +M + P+V S
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 382 LL 383
LL
Sbjct: 615 LL 616
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 133/341 (39%), Gaps = 50/341 (14%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P+T +N ++ + +A++ + + + K D +T + A+A A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
+ ++ G K G L AA K+F EM + ++ ++N M+ A+
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV--------------- 229
A+ L++ M+ G+ P+ VT + G L++ E V
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 230 HGYIVD--------EK------------LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
+G +VD EK L NV CN+++ + + + +AY + QNM
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDL--LDQMALDGVHPDAVSYLAALCACNHAGLVEE 327
+ T + + DG LD+ Q+ HP A +L + A AG E
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHP-AHMFLLKMPA---AGPDGE 692
Query: 328 GVR-----LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
VR DLM + +VVD L ++G+ +EA
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEA 733
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 10/242 (4%)
Query: 152 AKTGDLDAAQKVFDEMPK----RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPND 207
+ A K+ DEM + + ++N +I + + NEA+ +F +M+E G +P+
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 208 VTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQN 267
VT + ++ G L ++ + L + + +I+ K G + A+ +F
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 268 M---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGL 324
M CT +L+T+N M+ A + AL L M G PD V+Y + H G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 325 VEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQS 381
+EE +F M+ P+ YG +VDL G+AG +++A+ +M + P+V S
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 382 LL 383
LL
Sbjct: 615 LL 616
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 133/341 (39%), Gaps = 50/341 (14%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P+T +N ++ + +A++ + + + K D +T + A+A A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
+ ++ G K G L AA K+F EM + ++ ++N M+ A+
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV--------------- 229
A+ L++ M+ G+ P+ VT + G L++ E V
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 230 HGYIVD--------EK------------LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
+G +VD EK L NV CN+++ + + + +AY + QNM
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDL--LDQMALDGVHPDAVSYLAALCACNHAGLVEE 327
+ T + + DG LD+ Q+ HP A +L + A AG E
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHP-AHMFLLKMPA---AGPDGE 692
Query: 328 GVR-----LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
VR DLM + +VVD L ++G+ +EA
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEA 733
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 151/348 (43%), Gaps = 10/348 (2%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P + AV+ GL +P A++ + + + D + S + + +A +
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
+++ G G A ++ +M +R ++ ++N++I A+
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
+ EA LF M + PN VT ++ L + + + +V + +V+
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
N +I+ + K V +F++MS + +T+ T+I F D A + QM
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
DGVHP+ ++Y L G +E+ + +F+ ++ S ++P++ Y + + + +AG+++
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 362 EAYDTINSMPM---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ +D S+ + PDV+ + +++ G E A K+ E G
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 119/283 (42%), Gaps = 12/283 (4%)
Query: 95 RSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKT 154
R ++ + ++L +FA +G EA ++ ++++ D +
Sbjct: 304 RKINPNVVTFNSLIDAFAKEG-----KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 155 GDLDAAQKVFDEMPKRD----IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV 210
LD AQ++F M +D + ++N +I+G + + + + LF+ M G N VT
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 211 LGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSC 270
+ Q ++V +V + + N++ N ++D K G ++KA VF+ +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 271 TK---SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEE 327
+K + T+N M G DL ++L GV PD ++Y + GL EE
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 328 GVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
LF MK P+ Y +++ R G + + I M
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 134/326 (41%), Gaps = 9/326 (2%)
Query: 47 LCAISPAADLS-FAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVD 105
LC +D S + + R NP+ +N+++ A + +A + + + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 106 ALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFD 165
+T + + G EA QI + ++ + K + ++F
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 166 EMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG 221
+M +R + ++ +I G Q S + A +FK+M +G PN +T L + G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWN 278
L++ +V Y+ K++ ++ N + + K G V+ + +F ++S +I +N
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 279 TMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS 338
TMI F G +A L +M DG PD+ +Y + A G L M+
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 584
Query: 339 VVKPNMKHYGSVVDLLGRAGRIKEAY 364
+ YG V D+L GR+ + +
Sbjct: 585 RFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 50/303 (16%)
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
I + N++++G G+R +EA+AL +M E G++P+ VT +VHG
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF---------------TTLVHG 179
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNG 288
K +A ++ + M C L+T+ +I G
Sbjct: 180 LFQHNK--------------------ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 289 DGYKALDLLDQMALDGVHPDAVSY---LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMK 345
+ AL+LL++M + D V Y + +LC H V++ + LF M ++P++
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH---VDDALNLFTEMDNKGIRPDVF 276
Query: 346 HYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNVEMAEMASRKL 402
Y S++ L GR +A ++ M + P+VV + SL+ A G + AE ++
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 403 VEMGSN-SCGDFVLLSNVYAARQRWHDVKRVREAMITKDVRKVPGFSYTEID--CKIHKF 459
++ + + + L N + R + +++ M++KD T I+ CK K
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 460 ING 462
++G
Sbjct: 397 VDG 399
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 10/242 (4%)
Query: 152 AKTGDLDAAQKVFDEMPK----RDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPND 207
+ A K+ DEM + + ++N +I + + NEA+ +F +M+E G +P+
Sbjct: 375 GRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDR 434
Query: 208 VTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQN 267
VT + ++ G L ++ + L + + +I+ K G + A+ +F
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 268 M---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGL 324
M CT +L+T+N M+ A + AL L M G PD V+Y + H G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 325 VEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQS 381
+EE +F M+ P+ YG +VDL G+AG +++A+ +M + P+V S
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 382 LL 383
LL
Sbjct: 615 LL 616
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 133/341 (39%), Gaps = 50/341 (14%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P+T +N ++ + +A++ + + + K D +T + A+A A +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ 184
+ ++ G K G L AA K+F EM + ++ ++N M+ A+
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV--------------- 229
A+ L++ M+ G+ P+ VT + G L++ E V
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 230 HGYIVD--------EK------------LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS 269
+G +VD EK L NV CN+++ + + + +AY + QNM
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 270 CTKSLITWNTMIMAFAMNGDGYKALDL--LDQMALDGVHPDAVSYLAALCACNHAGLVEE 327
+ T + + DG LD+ Q+ HP A +L + A AG E
Sbjct: 637 ALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHP-AHMFLLKMPA---AGPDGE 692
Query: 328 GVR-----LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEA 363
VR DLM + +VVD L ++G+ +EA
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEA 733
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 148/350 (42%), Gaps = 10/350 (2%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L+ ++ + PS +++L G + + A++ + + D +T + + G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRD 171
SEA + ++++ G K GD D A + ++M + D
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
+ +N +I L + ++A+ LFK M+ +G RPN VT +S G +
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNG 288
++++K++ N++ NA+ID + K G +A ++ +M S + T+N+++ F M+
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG 348
KA + + M PD V+Y + + VE+G LF M + + Y
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 349 SVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNVEMA 395
+++ L G A M + PD++ + LL G +E A
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 42/276 (15%)
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
I + +++++G G R ++A+AL +M E G+RP+ +T ++HG
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT---------------TLIHG 199
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLITWNTMIMAFAMNGDGY 291
+ K V A++D + G C +L+T+ ++ GD
Sbjct: 200 LFLHNKASEAV----ALVDRMVQRG-------------CQPNLVTYGVVVNGLCKRGDTD 242
Query: 292 KALDLLDQMALDGVHPDAVSY---LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG 348
AL+LL++M + D V + + +LC H V++ + LF M+ ++PN+ Y
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH---VDDALNLFKEMETKGIRPNVVTYS 299
Query: 349 SVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
S++ L GR +A ++ M + P++V + +L+ A G AE +++
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 406 GSN-SCGDFVLLSNVYAARQRWHDVKRVREAMITKD 440
+ + L N + R K++ E M++KD
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD----IASWNA 177
F EA +++ +++ D + LD A+++F+ M +D + ++N
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+I G + R + LF+ M G + VT + G + V +V +
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK---SLITWNTMIMAFAMNGDGYKAL 294
+ +++ + ++D G ++KA VF M ++ + + TMI G
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
DL ++L GV P+ V+Y + L++E L MK PN Y +++
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Query: 355 GRAGRIKEAYDTINSM 370
R G + + I M
Sbjct: 586 LRDGDKAASAELIREM 601
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 115/270 (42%), Gaps = 27/270 (10%)
Query: 189 NEAIALFKRMKEEGWRPNDVTVLGALSACSQLGA----------LKQGEIVHGYIVDEKL 238
++AI LF M + P+ V LSA +++ +++ EIVHG
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG------- 119
Query: 239 DMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALD 295
+ N +I+ + + + A ++ M S++T ++++ + A+
Sbjct: 120 ---LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 296 LLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLG 355
L+DQM G PD +++ + E V L D M +PN+ YG VV+ L
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 356 RAGRIKEAYDTINSMP---MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG-SNSCG 411
+ G A + +N M + DVV++ +++ + Y +V+ A +++ G +
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 412 DFVLLSNVYAARQRWHDVKRVREAMITKDV 441
+ L + + RW D ++ MI K +
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 13/259 (5%)
Query: 151 YAKTGDLDAAQKVFDEMPKR----DIASWNAMISGLAQ--GSRPNEAIALFKRMKEEGWR 204
Y+++G AQ++ D M +R D+ S+N +I+ + G PN A+ L ++ G R
Sbjct: 235 YSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR 294
Query: 205 PNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSV 264
P+ +T LSACS+ L V + + ++ NA+I +Y +CG +A +
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 265 FQNMSCT---KSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNH 321
F + +T+N+++ AFA + K ++ QM G D ++Y +
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 322 AGLVEEGVRLFDLMKG-SVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVV 377
G ++ ++L+ MKG S P+ Y ++D LG+A R EA ++ M + P +
Sbjct: 415 QGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQ 474
Query: 378 LWQSLLGASKTYGNVEMAE 396
+ +L+ G E AE
Sbjct: 475 TYSALICGYAKAGKREEAE 493
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 242 VIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYK--ALDL 296
V V NA++ +YS+ G KA + M C LI++NT+I A +G A++L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 297 LDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGR 356
LD + G+ PDA++Y L AC+ ++ V++F+ M+ +P++ Y +++ + GR
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 357 AGRIKEAYDTINSMPM---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
G EA + + PD V + SLL A N E + +++ +MG
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 8/227 (3%)
Query: 152 AKTGDLDAAQKVFDEMP----KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPND 207
++ +LD A KVF++M + D+ ++NAMIS + EA LF ++ +G+ P+
Sbjct: 308 SRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDA 367
Query: 208 VTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQN 267
VT L A ++ ++ + V+ + + + N +I MY K G +D A ++++
Sbjct: 368 VTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Query: 268 MSC----TKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAG 323
M IT+ +I + +A L+ +M G+ P +Y A +C AG
Sbjct: 428 MKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Query: 324 LVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
EE F M S KP+ Y ++D+L R ++A+ M
Sbjct: 488 KREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/336 (18%), Positives = 134/336 (39%), Gaps = 12/336 (3%)
Query: 62 IFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALT 121
+ R +P+ N +L L + + + + K+ + L ARA
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRDIASWNA 177
E +I+S + G+ K + A+ + EM K ++A WN+
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
M+ + + +++R+KE G P++ T + + ++G ++ + +
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKSLIT----WNTMIMAFAMNGDGYKA 293
LD + ++I + K +++A +F+ + +K L ++TM+ +G KA
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMKISRDSGSDSKA 1051
Query: 294 LDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDL 353
LL M G+ P + + + + +G +E ++ +K + V+ Y SV+D
Sbjct: 1052 EKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 354 LGRAGRIKEAYDTINSMP---MLPDVVLWQSLLGAS 386
R+ + + M + PD +W + A+
Sbjct: 1112 YLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAA 1147
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 131/299 (43%), Gaps = 10/299 (3%)
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA---- 173
R +EA + S+++R G + K GD+ AA K F EM RDI
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
++ A+ISG Q EA LF M +G P+ VT ++ + G +K VH ++
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDG 290
+ NV+ +ID K G +D A + M ++ T+N+++ +G+
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV 350
+A+ L+ + G++ D V+Y + A +G +++ + M G ++P + + +
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 351 VDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
++ G +++ +N M + P+ + SL+ N++ A + + G
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 108/231 (46%), Gaps = 6/231 (2%)
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
D+ S++ +++G + ++ L + MK +G +PN + ++ L + E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMN 287
++ + + + +V +ID + K G + A F M T ++T+ +I F
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY 347
GD +A L +M G+ PD+V++ + AG +++ R+ + M + PN+ Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 348 GSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNVEMA 395
+++D L + G + A + ++ M + P++ + S++ GN+E A
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 132/320 (41%), Gaps = 7/320 (2%)
Query: 58 FAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCA 117
F ++ R P + A++ G +A + + + D++T + + G
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK----RDIA 173
+A +A ++H+ +++ G K GDLD+A ++ EM K +I
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
++N++++GL + EA+ L + G + VT + A + G + + + + +
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDG 290
+ + L ++ N +++ + G ++ + M + T+N+++ + + +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV 350
A + M GV PD +Y + A ++E LF MKG ++ Y +
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 351 VDLLGRAGRIKEAYDTINSM 370
+ + + EA + + M
Sbjct: 673 IKGFLKRKKFLEAREVFDQM 692
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 12/195 (6%)
Query: 220 LGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSK-CGFVDKAYSVFQN---MSCTKSLI 275
G L++ V +++ L ++V CN + SK C A VF+ + ++
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
++N +I G +A LL M L G PD +SY + G +++ +L ++M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 336 KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNV 392
K +KPN YGS++ LL R ++ EA + + M +LPD V++ +L+ G++
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 393 EMA-----EMASRKL 402
A EM SR +
Sbjct: 368 RAASKFFYEMHSRDI 382
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 131/299 (43%), Gaps = 10/299 (3%)
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIA---- 173
R +EA + S+++R G + K GD+ AA K F EM RDI
Sbjct: 328 RICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
++ A+ISG Q EA LF M +G P+ VT ++ + G +K VH ++
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDG 290
+ NV+ +ID K G +D A + M ++ T+N+++ +G+
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV 350
+A+ L+ + G++ D V+Y + A +G +++ + M G ++P + + +
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 351 VDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
++ G +++ +N M + P+ + SL+ N++ A + + G
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 108/231 (46%), Gaps = 6/231 (2%)
Query: 171 DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH 230
D+ S++ +++G + ++ L + MK +G +PN + ++ L + E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 231 GYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMN 287
++ + + + +V +ID + K G + A F M T ++T+ +I F
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 288 GDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHY 347
GD +A L +M G+ PD+V++ + AG +++ R+ + M + PN+ Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 348 GSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNVEMA 395
+++D L + G + A + ++ M + P++ + S++ GN+E A
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 132/320 (41%), Gaps = 7/320 (2%)
Query: 58 FAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCA 117
F ++ R P + A++ G +A + + + D++T + + G
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 118 RALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPK----RDIA 173
+A +A ++H+ +++ G K GDLD+A ++ EM K +I
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 174 SWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYI 233
++N++++GL + EA+ L + G + VT + A + G + + + + +
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 234 VDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDG 290
+ + L ++ N +++ + G ++ + M + T+N+++ + + +
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 291 YKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSV 350
A + M GV PD +Y + A ++E LF MKG ++ Y +
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 351 VDLLGRAGRIKEAYDTINSM 370
+ + + EA + + M
Sbjct: 673 IKGFLKRKKFLEAREVFDQM 692
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 12/195 (6%)
Query: 220 LGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSK-CGFVDKAYSVFQN---MSCTKSLI 275
G L++ V +++ L ++V CN + SK C A VF+ + ++
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVA 247
Query: 276 TWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLM 335
++N +I G +A LL M L G PD +SY + G +++ +L ++M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 336 KGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNV 392
K +KPN YGS++ LL R ++ EA + + M +LPD V++ +L+ G++
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 393 EMA-----EMASRKL 402
A EM SR +
Sbjct: 368 RAASKFFYEMHSRDI 382
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 171/393 (43%), Gaps = 56/393 (14%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
P +N ++ GL A++ ++ + + + +T S + +S+A+++
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDI----ASWNAMISGLAQ 184
S ++ + + K G L A+K++DEM KR I +++++I+G
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
R +EA +F+ M + P+ VT
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTY---------------------------------- 399
Query: 245 CNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
N +I + K V++ VF+ MS + +T+N +I GD A ++ +M
Sbjct: 400 -NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 302 LDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIK 361
DGV P+ ++Y L G +E+ + +F+ ++ S ++P + Y +++ + +AG+++
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 362 EAYDTINSMPM---LPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMGS---NSCGDFVL 415
+ +D ++ + PDVV + +++ G+ E A+ +++ E G+ + C + ++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 416 LSNVYAARQRWHDVKRVREAMITKDVRKVPGFS 448
R R D R A + K++R GF+
Sbjct: 579 -------RARLRDGDREASAELIKEMRSC-GFA 603
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 155/350 (44%), Gaps = 10/350 (2%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L+ ++ + P+ +++L G S + ++A++ + + + + +T + + G
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRDIAS- 174
SEA + +++ G K GD D A + ++M + +
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255
Query: 175 ---WNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
+N +I GL + ++A+ LFK M+ +G RPN VT +S G +
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNG 288
+++ K++ +V +A+ID + K G + +A ++ M S S++T++++I F M+
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 289 DGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYG 348
+A + + M PD V+Y + VEEG+ +F M + N Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 349 SVVDLLGRAG---RIKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
++ L +AG +E + + S + P+++ + +LL G +E A
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 131/326 (40%), Gaps = 9/326 (2%)
Query: 47 LCAISPAADLS-FAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVD 105
LC +D S + + R NP ++A++ + +A Y + +
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 106 ALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFD 165
+T S + G EA Q+ ++ + K ++ +VF
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 166 EMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLG 221
EM +R + ++N +I GL Q + A +FK M +G PN +T L + G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 222 ALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWN 278
L++ +V Y+ K++ + N +I+ K G V+ + +F N+S ++ +N
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 279 TMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS 338
TMI F G +A L +M DG P++ Y + A G E L M+
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 339 VVKPNMKHYGSVVDLLGRAGRIKEAY 364
+ G V ++L GR+ +++
Sbjct: 601 GFAGDASTIGLVTNML-HDGRLDKSF 625
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 165/410 (40%), Gaps = 80/410 (19%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L+ ++ + PS +++L G + + A++ + + D +T + + G
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRD 171
SEA + ++++ G K GD+D A + ++M + D
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTV---------LGALSACSQL-- 220
+ +N +I L + ++A+ LFK M+ +G RPN VT G S SQL
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 221 ------------------------GALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCG 256
G + E +H ++ +D ++ N++I+ +
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 257 FVDKAYSVFQNM---SCTKSLITWNTMIMAFAM--------------------------- 286
+DKA +F+ M C L T+NT+I F
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 287 --------NGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS 338
+GD A + QM DGV PD ++Y L + G +E+ + +FD M+ S
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 339 VVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPM---LPDVVLWQSLLGA 385
+K ++ Y ++++ + +AG++ + +D S+ + P+VV + +++
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 122 FSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKRD----IASWNA 177
F EA ++H +++ D + LD A+++F+ M +D + ++N
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 178 MISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEK 237
+I G + R + LF+ M G + VT + G + V +V +
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 238 LDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK---SLITWNTMIMAFAMNGDGYKAL 294
+ +++ + ++D G ++KA VF M ++ + + TMI G
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 295 DLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLL 354
DL ++L GV P+ V+Y + L++E L MK P+ Y +++
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 355 GRAGRIKEAYDTINSM 370
R G + + I M
Sbjct: 511 LRDGDKAASAELIREM 526
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 273 SLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLF 332
S++T ++++ + A+ L+DQM G PD +++ + E V L
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 333 DLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMP---MLPDVVLWQSLLGASKTY 389
D M +PN+ YG VV+ L + G I A++ +N M + DVV++ +++ + Y
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 390 GNVEMAEMASRKLVEMG-SNSCGDFVLLSNVYAARQRWHDVKRVREAMITKDV 441
+V+ A +++ G + + L + + RW D ++ MI K +
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 162 KVFDEMP----KRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSAC 217
K+ DEM K + ++N +I + + EA+ +F +M+E G P+ VT +
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 218 SQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSL 274
++ G L ++ + + L + + +I+ K G + A+ +F M CT +L
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 499
Query: 275 ITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDL 334
+T+N MI A + AL L M G PD V+Y + H G +EE +F
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 559
Query: 335 MKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLL 383
M+ P+ YG +VDL G+AG + +A+ +M + P+V SLL
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 178/417 (42%), Gaps = 57/417 (13%)
Query: 42 TKLLELCAISPAADLSFAAQIFRRIQ----NPSTNDWNAVLRGLAMSPQPTQAISWYRSV 97
T+LL + A D+ + +F ++Q P N V+ + +S QP +A + +
Sbjct: 87 TRLLSVIAKMNRYDVVIS--LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKM 144
Query: 98 SRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL 157
+ + D +T + L G +A + Q+L GF K L
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 158 DAAQKVFDEM----PKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGA 213
+ A ++F++M + ++ ++NA+++GL + R +A L + M + PN +T
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 214 LSACSQLGALKQ--------------------GEIVHGY----IVDEKLDM--------- 240
+ A ++G L + G +++G ++DE M
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 241 --NVIVCNAVIDMYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALD 295
N ++ +I + K V+ +F MS + IT+ +I + + G A +
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 296 LLDQMALDGVHPDAVSY---LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVD 352
+ +QM+ PD +Y L LC CN G VE+ + +F+ M+ + N+ Y ++
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLC-CN--GKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 353 LLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEMG 406
+ + G++++A+D S+ M P+V+ + +++ G + A+ +K+ E G
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 114/260 (43%), Gaps = 9/260 (3%)
Query: 157 LDAAQKVFDEMPKRDIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSA 216
LD ++ P I + ++S +A+ +R + I+LF++M+ G P T +
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127
Query: 217 CSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQN---MSCTKS 273
+ G ++ + +++ ++++ Y ++ A ++F M +
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 274 LITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFD 333
++T+ T+I N A++L +QM +G P+ V+Y A + G + L
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 334 LMKGSVVKPNMKHYGSVVDLLGRAGRI---KEAYDTINSMPMLPDVVLWQSLLGASKTYG 390
M ++PN+ + +++D + G++ KE Y+ + M + PDV + SL+ YG
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 391 NVEMAEMASRKLVEMGSNSC 410
+ + A + M N C
Sbjct: 308 ---LLDEARQMFYLMERNGC 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 120/303 (39%), Gaps = 11/303 (3%)
Query: 56 LSFAAQIFRRI----QNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSF 111
L+ A ++F ++ P+ +NA++ GL + A R + + + + +T +
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 112 ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR- 170
+ + EA ++++ +++ G LD A+++F M +
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 171 ---DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE 227
+ + +I G + R + + +F M ++G N +T + +G +
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTK---SLITWNTMIMAF 284
V + + ++ N ++D G V+KA +F+ M + +++T+ +I
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 285 AMNGDGYKALDLLDQMALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNM 344
G A DL + G+ P+ ++Y + GL+ E LF MK PN
Sbjct: 444 CKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Query: 345 KHY 347
Y
Sbjct: 504 SVY 506
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 146/332 (43%), Gaps = 20/332 (6%)
Query: 56 LSFAAQIFRRIQN----PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSF 111
+++A +F +++N P + +++ GL S + A S R +++ K D +T +
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 112 ALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR- 170
+ + F +A +++++++R + G +D A+++F M +
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 171 ---DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGE 227
D+ ++ ++I+G + + ++A+ +F M ++G N +T + Q+G +
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 228 IVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMS------CTKSLITWNTMI 281
V ++V + N+ N ++ G V KA +F++M ++ T+N ++
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 282 MAFAMNGDGYKALDLLDQM---ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGS 338
NG KAL + + M +D + +C AG V+ V LF +
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK---AGKVKNAVNLFCSLPSK 489
Query: 339 VVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM 370
VKPN+ Y +++ L R G EA+ M
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 144/342 (42%), Gaps = 16/342 (4%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQI 128
PS D+ +L +A + I+ + D TC+ + ++ A+
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 129 HSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRDIASWNAMISGLAQ 184
++++ GF+ + ++ A + ++M K D+ + +I L +
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 185 GSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIV 244
N A++LF +M+ G RP+ V ++ G + + + + K+ +VI
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 245 CNAVIDMYSKCG-FVD--KAYSVFQNMSCTKSLITWNTMIMAFAMNGDGYKALDLLDQMA 301
NA+ID + K G F+D + Y+ MS ++ T+ ++I F M G +A + M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 302 LDGVHPDAVSY---LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAG 358
G PD V+Y + C C V++ +++F M + N Y +++ G+ G
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKK---VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 359 R---IKEAYDTINSMPMLPDVVLWQSLLGASKTYGNVEMAEM 397
+ +E + + S + P++ + LL G V+ A M
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 137/337 (40%), Gaps = 13/337 (3%)
Query: 75 NAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLR 134
N ++ S QP A S+ + + + D +T + + G EA + +Q++
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 135 FGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRDIASWNAMISGLAQGSRPNE 190
G K G ++ A +FD+M + D+ + ++++GL R +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 191 AIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVID 250
A +L + M + +P+ +T + A + G E ++ ++ + N+ ++I+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 251 MYSKCGFVDKAYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHP 307
+ G VD+A +F M C ++ + ++I F A+ + +M+ G+
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 308 DAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTI 367
+ ++Y + G +F M V PN++ Y ++ L G++K+A
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 368 NSMP------MLPDVVLWQSLLGASKTYGNVEMAEMA 398
M + P++ + LL G +E A M
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 189 NEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIV-----HGYIVDEKLDMNVI 243
NEA+ LF M E P+ + L+ + +K+ ++V H I+ D+
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNV---IAKMKKFDVVINLCDHLQIMGVSHDL--Y 108
Query: 244 VCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNGDGYKALDLLDQM 300
CN +++ + + A S M ++T+ ++I F + +A+ +++QM
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
G+ PD V Y + + G V + LFD M+ ++P++ Y S+V+ L +GR
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 361 KEAYDTINSMP---MLPDVVLWQSLLGASKTYGNVEMAEMASRKLVEM 405
++A + M + PDV+ + +L+ A G AE +++ M
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 181/431 (41%), Gaps = 67/431 (15%)
Query: 69 PSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG-CARA-------- 119
P T + ++ GL + + ++A++ + + + D +T + G C R
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 120 LTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMPKR----DIASW 175
L EA +I + V+ F K ++ A +F EM + ++ ++
Sbjct: 246 LNKMEAARIKANVVIFN---------TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 176 NAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVH----- 230
N++I+ L R ++A L M E+ PN VT + A + G L + E +H
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 231 ---------------GYIVDEKLDM---------------NVIVCNAVIDMYSKCGFVDK 260
G+ + +LD N+ N +I+ + KC V+
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 261 AYSVFQNMS---CTKSLITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSYLAALC 317
+F+ MS + +T+ T+I F GD A + QM + V D ++Y L
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 318 ACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSMPMLPDVV 377
G ++ + +F ++ S ++ N+ Y ++++ + +AG++ EA+D S+ + PDVV
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVV 536
Query: 378 LWQSLLGASKTYGNVEMAEMASRKLVEMGS-NSCGDFVLLSNVYAARQRWHDVKRVREAM 436
+ +++ + ++ A+ RK+ E G+ + G + L R D R A
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL-----IRANLRDCDRAASAE 591
Query: 437 ITKDVRKVPGF 447
+ K++R GF
Sbjct: 592 LIKEMRS-SGF 601
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 149/353 (42%), Gaps = 16/353 (4%)
Query: 56 LSFAAQIFRRIQNPSTNDWNAVLRGLAMSPQPTQAISWYRSVSRSPQKVDALTCSFALKG 115
L+ A++ + P +++L G S + + A++ + K D T + + G
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 116 CARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDLDAAQKVFDEMP----KRD 171
SEA + Q+++ G K GD+D A + ++M K +
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 172 IASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGALSACSQLGALKQGEIVHG 231
+ +N +I L + A+ LF M+ +G RPN VT ++ G +
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 232 YIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNM---SCTKSLITWNTMIMAFAMNG 288
++++K++ NV+ NA+ID + K G + +A + + M S IT+N +I F M+
Sbjct: 318 NMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 289 DGYKALDLLDQMALDGVHPDAVSY---LAALCACNHAGLVEEGVRLFDLMKGSVVKPNMK 345
+A + M P+ +Y + C C VE+GV LF M + N
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR---VEDGVELFREMSQRGLVGNTV 434
Query: 346 HYGSVVDLLGRAGRIKEA---YDTINSMPMLPDVVLWQSLLGASKTYGNVEMA 395
Y +++ +AG A + + S + D++ + LL +YG ++ A
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 170/414 (41%), Gaps = 57/414 (13%)
Query: 39 PSRTKLLELCAISPAADLSFAAQIFRRIQNPSTNDWNAVLRG-LAMSPQPTQAISWYRSV 97
P+ LC S + SFA+ ++ D+ +LR L+ + A+ + +
Sbjct: 25 PTVPSFFNLCG-SGCWERSFAS---------ASGDYREILRNRLSDIIKVDDAVDLFGDM 74
Query: 98 SRSPQKVDALTCSFALKGCARALTFSEATQIHSQVLRFGFDAXXXXXXXXXXXYAKTGDL 157
+S + + L A+ F + Q+ G + + L
Sbjct: 75 VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134
Query: 158 DAAQKVFDEMPKR----DIASWNAMISGLAQGSRPNEAIALFKRMKEEGWRPNDVTVLGA 213
A V +M K DI + +++++G R ++A+AL +M E G++P+ T
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF--- 191
Query: 214 LSACSQLGALKQGEIVHGYIVDEKLDMNVIVCNAVIDMYSKCGFVDKAYSVFQNMSCTKS 273
++HG + K V A++D + G C
Sbjct: 192 ------------TTLIHGLFLHNKASEAV----ALVDQMVQRG-------------CQPD 222
Query: 274 LITWNTMIMAFAMNGDGYKALDLLDQMALDGVHPDAVSY---LAALCACNHAGLVEEGVR 330
L+T+ T++ GD AL+LL++M + + V + + +LC H VE V
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH---VEVAVD 279
Query: 331 LFDLMKGSVVKPNMKHYGSVVDLLGRAGRIKEAYDTINSM---PMLPDVVLWQSLLGASK 387
LF M+ ++PN+ Y S+++ L GR +A +++M + P+VV + +L+ A
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 388 TYGNVEMAEMASRKLVEMGSN-SCGDFVLLSNVYAARQRWHDVKRVREAMITKD 440
G + AE ++++ + + LL N + R + K++ + M++KD
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 32/209 (15%)
Query: 261 AYSVFQNMSCTKSLITWNTMIMAFAMNG-------------DGY-------KALDLLDQM 300
YS+F N C +S ++ ++A M +GY A+ L+DQM
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 301 ALDGVHPDAVSYLAALCACNHAGLVEEGVRLFDLMKGSVVKPNMKHYGSVVDLLGRAGRI 360
G PD ++ + E V L D M +P++ YG+VV+ L + G I
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 361 KEAYDTINSMP---MLPDVVLWQSLLGASKTYGNVEMA-----EMASRKLVEMGSNSCGD 412
A + +N M + +VV++ +++ + Y +VE+A EM ++ + +
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI----RPNVVT 295
Query: 413 FVLLSNVYAARQRWHDVKRVREAMITKDV 441
+ L N RW D R+ M+ K +
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKI 324