Miyakogusa Predicted Gene

Lj3g3v3667640.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3667640.2 Non Chatacterized Hit- tr|I1LNY5|I1LNY5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48244
PE,91.12,0,seg,NULL; ThiF,UBA/THIF-type NAD/FAD binding fold; no
description,NAD(P)-binding domain; AUTOPHAGY-R,CUFF.46184.2
         (169 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G45900.1 | Symbols: APG7, ATAPG7, ATG7, ATATG7 | ThiF family ...   233   5e-62

>AT5G45900.1 | Symbols: APG7, ATAPG7, ATG7, ATATG7 | ThiF family
           protein | chr5:18615304-18618436 FORWARD LENGTH=697
          Length = 697

 Score =  233 bits (593), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 112/170 (65%), Positives = 133/170 (78%), Gaps = 1/170 (0%)

Query: 1   MGLSLIGEALITIPQGWK-DVVPNAVGWEHHKGRKAPRCISLAQSMDPSRLAVSAADLNL 59
           + LSL+G+A IT+  G   + VPN+VGWE +KG++ PR ISLA SMDP+RLAVSA DLNL
Sbjct: 280 LNLSLVGQASITLSSGESAETVPNSVGWELNKGKRVPRSISLANSMDPTRLAVSAVDLNL 339

Query: 60  KLMRWRXXXXXXXXXXXXVKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLR 119
           KLMRWR            VKCLLLGAGTLGCQVAR LM WG+R IT +D G+VAMSNP+R
Sbjct: 340 KLMRWRALPSLNLNVLSSVKCLLLGAGTLGCQVARTLMGWGIRNITFVDYGKVAMSNPVR 399

Query: 120 QSLYTLDNCLNGGEFKATAAVESLKRIFPAVEAEGIVMAIPMPGHPINSQ 169
           QSLY  ++CL  GEFKA AAV+SLK+IFPA+E  G+VMAIPMPGHPI+SQ
Sbjct: 400 QSLYNFEDCLGRGEFKAVAAVKSLKQIFPAMETSGVVMAIPMPGHPISSQ 449