Miyakogusa Predicted Gene

Lj3g3v3666590.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3666590.1 Non Chatacterized Hit- tr|B9SV78|B9SV78_RICCO
Putative uncharacterized protein OS=Ricinus communis G,38.41,3e-18,
,CUFF.46173.1
         (309 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01550.2 | Symbols: BPS1 | Protein of unknown function (DUF79...    65   9e-11
AT1G01550.1 | Symbols: BPS1 | Protein of unknown function (DUF79...    65   9e-11
AT2G46080.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Protein BY...    54   1e-07

>AT1G01550.2 | Symbols: BPS1 | Protein of unknown function (DUF793)
           | chr1:200526-201575 FORWARD LENGTH=349
          Length = 349

 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 2/114 (1%)

Query: 23  SEELQASLQAFRSEVSKFIDQLALDLKPGSEILSLSWIEKCLELLSITIKALANLAVDID 82
           S +L   L  F + ++  I +L    K  S+IL++SW+++ +E L  T   +  L  D++
Sbjct: 29  SSKLLPLLNNFETNLASSISKLVP--KEKSDILTVSWMKQAMESLCETHNGIKTLITDLE 86

Query: 83  YPMSVWEVDSIEGYLSYSLCLLDLFNSISSSFSRLEQARLSLSHGLALLEKNSP 136
            P+S WE   ++ YL  S+ LLDL N+ SS  +RL Q  L L   L  LE NSP
Sbjct: 87  LPVSDWEDKWVDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFALHNLEANSP 140


>AT1G01550.1 | Symbols: BPS1 | Protein of unknown function (DUF793)
           | chr1:200526-201575 FORWARD LENGTH=349
          Length = 349

 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 2/114 (1%)

Query: 23  SEELQASLQAFRSEVSKFIDQLALDLKPGSEILSLSWIEKCLELLSITIKALANLAVDID 82
           S +L   L  F + ++  I +L    K  S+IL++SW+++ +E L  T   +  L  D++
Sbjct: 29  SSKLLPLLNNFETNLASSISKLVP--KEKSDILTVSWMKQAMESLCETHNGIKTLITDLE 86

Query: 83  YPMSVWEVDSIEGYLSYSLCLLDLFNSISSSFSRLEQARLSLSHGLALLEKNSP 136
            P+S WE   ++ YL  S+ LLDL N+ SS  +RL Q  L L   L  LE NSP
Sbjct: 87  LPVSDWEDKWVDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFALHNLEANSP 140


>AT2G46080.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Protein
           BYPASS related (InterPro:IPR008511); BEST Arabidopsis
           thaliana protein match is: Protein of unknown function
           (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139
           proteins in 20 species: Archae - 0; Bacteria - 2;
           Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr2:18948317-18949360 REVERSE LENGTH=347
          Length = 347

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 50/87 (57%)

Query: 49  KPGSEILSLSWIEKCLELLSITIKALANLAVDIDYPMSVWEVDSIEGYLSYSLCLLDLFN 108
           K   +IL+LSW++  +E L  T K +  L  D+  P+S WE   ++ YL+ S+ LLDL N
Sbjct: 53  KNKDDILTLSWMKLAMESLCETHKNINTLITDLQLPVSDWEEKWVDVYLNISVRLLDLCN 112

Query: 109 SISSSFSRLEQARLSLSHGLALLEKNS 135
           + SS  +RL Q  L L   L  L+ +S
Sbjct: 113 AFSSELTRLNQGDLFLKCVLHNLQSDS 139