Miyakogusa Predicted Gene

Lj3g3v3666560.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3666560.2 Non Chatacterized Hit- tr|I3S8K8|I3S8K8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.84,0,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; UNCHARACTERIZED,NULL; no
description,NULL,CUFF.46177.2
         (258 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60910.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   379   e-105
AT3G17365.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   202   2e-52
AT3G17365.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   161   5e-40
AT4G34360.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   108   3e-24
AT2G31740.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   102   2e-22
AT1G66680.1 | Symbols: AR401 | S-adenosyl-L-methionine-dependent...    59   3e-09

>AT3G60910.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:22501727-22503182 FORWARD LENGTH=252
          Length = 252

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 177/250 (70%), Positives = 211/250 (84%)

Query: 4   QRDVSSCNTYNYGDALYWDTRYIQEGGSFDWYQRYSSLRPFVRHCFPLSSTLLMVGCGNA 63
           QRDVSSCNTYNYGDALYWD RY+Q+  SFDWYQ YSSLRPFVR     SS +LMVGCGN+
Sbjct: 2   QRDVSSCNTYNYGDALYWDARYVQDALSFDWYQCYSSLRPFVRSFVSTSSRVLMVGCGNS 61

Query: 64  VMSEDMVKDGYEDIVNIDISSVAIDMMRRKYEYIPQLKYMQMDVRDMSYFPDESFDGVID 123
           +MSEDMVKDGYEDI+N+DISSVAI+MM+ KY  +PQLKYMQMDVRDMSYF D+SFD +ID
Sbjct: 62  LMSEDMVKDGYEDIMNVDISSVAIEMMQTKYASVPQLKYMQMDVRDMSYFEDDSFDTIID 121

Query: 124 KGTLDSLMCGTDAPISASQMLAEVCRLLKPGGSYMLITYGDPTVRMPHLSKPVYNWKITL 183
           KGTLDSLMCG+DA +SAS+ML EV RL+KPGG+Y LITYGDP VRMPHL++  YNWKI+L
Sbjct: 122 KGTLDSLMCGSDALLSASRMLGEVSRLIKPGGTYFLITYGDPKVRMPHLTRSAYNWKISL 181

Query: 184 YNIPRPGFQKPETSTSARKSYLEPIPLTEKGSLPTDWVMEDPDSHFIYVCRKIIDTEIDN 243
           Y IPRPGF++PE+ +S+ KS +E IP+T +G LP D+V+EDPDSHFIY+C+K  + E   
Sbjct: 182 YIIPRPGFKRPESCSSSAKSCMEAIPITSEGMLPHDYVLEDPDSHFIYICKKKDEDEEAQ 241

Query: 244 VPSYKLTTDV 253
           +PSY L  DV
Sbjct: 242 LPSYPLMEDV 251


>AT3G17365.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:5947144-5948766 REVERSE LENGTH=239
          Length = 239

 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 107/225 (47%), Positives = 143/225 (63%), Gaps = 4/225 (1%)

Query: 12  TYNYGDALYWDTRYIQEGGSFDWYQRYSSLRPFVRHCFPL-SSTLLMVGCGNAVMSEDMV 70
           T +Y +  YWD RY  E   FDWYQ+YS L P +    P  +  +L++GCGN+  SE MV
Sbjct: 7   TQSYSEQWYWDDRYKNESEPFDWYQKYSPLAPLINLYVPQRNQRVLVIGCGNSAFSEGMV 66

Query: 71  KDGYEDIVNIDISSVAIDMMRRKYEYIPQLKYMQMDVRDMSYFPDESFDGVIDKGTLDSL 130
            DGYED+V+IDISSV ID M +KY   PQLKY++MDVRDM  F D SFD VIDKGTLDS+
Sbjct: 67  DDGYEDVVSIDISSVVIDTMIKKYSDRPQLKYLKMDVRDMKAFEDASFDAVIDKGTLDSI 126

Query: 131 MCGTDAPISASQMLAEVCRLLKPGGSYMLITYGDPTVRMPHLSKPVYNWKITLYNIPRPG 190
           +CG+++   ++QML EV R+LK  G Y+LITYG P  R+  L K   +W   L+ I +  
Sbjct: 127 LCGSNSRQYSTQMLEEVWRVLKDKGVYILITYGAPIYRL-RLFKESCSWTTKLHVIDKSL 185

Query: 191 FQKPETSTSARKSYLEPIPLTEKGSLPTDWVMEDPDSHFIYVCRK 235
             +P    + +    +P+PL   GS     + ++PD H+IYVC K
Sbjct: 186 TDQP--LDTPKWELTKPLPLDADGSSVESAIGKNPDVHYIYVCIK 228


>AT3G17365.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:5947144-5948766 REVERSE LENGTH=277
          Length = 277

 Score =  161 bits (407), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/263 (39%), Positives = 134/263 (50%), Gaps = 42/263 (15%)

Query: 12  TYNYGDALYWDTRYIQEGGSFDWYQRYSSLRPFVRHCFPL-SSTLLMVGCGNAVMSEDMV 70
           T +Y +  YWD RY  E   FDWYQ+YS L P +    P  +  +L++GCGN+  SE MV
Sbjct: 7   TQSYSEQWYWDDRYKNESEPFDWYQKYSPLAPLINLYVPQRNQRVLVIGCGNSAFSEGMV 66

Query: 71  KDGYEDIVNIDISSVAIDMMRRKYEYIPQLKYMQMDVRDMSYFPDESFDGVIDKGTL--- 127
            DGYED+V+IDISSV ID M +KY   PQLKY++MDVRDM  F D SFD VIDKG L   
Sbjct: 67  DDGYEDVVSIDISSVVIDTMIKKYSDRPQLKYLKMDVRDMKAFEDASFDAVIDKGVLTTC 126

Query: 128 ----DSLMC-----------------------GTDAPISASQM--------LAEVCRLLK 152
                SL C                       G    I  +          + E  R+LK
Sbjct: 127 LNIITSLKCIMFHLYNILDFCVCVFRNLRLHFGDVGVIRGNTQHKCLKRFGVDETYRVLK 186

Query: 153 PGGSYMLITYGDPTVRMPHLSKPVYNWKITLYNIPRPGFQKPETSTSARKSYLEPIPLTE 212
             G Y+LITYG P  R+  L K   +W   L+ I +    +P    + +    +P+PL  
Sbjct: 187 DKGVYILITYGAPIYRL-RLFKESCSWTTKLHVIDKSLTDQP--LDTPKWELTKPLPLDA 243

Query: 213 KGSLPTDWVMEDPDSHFIYVCRK 235
            GS     + ++PD H+IYVC K
Sbjct: 244 DGSSVESAIGKNPDVHYIYVCIK 266


>AT4G34360.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:16432011-16433752 FORWARD LENGTH=248
          Length = 248

 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 108/202 (53%), Gaps = 13/202 (6%)

Query: 1   MYSQRDVSSCNTYNYGDALYWDTRYIQEGGSFDWYQRYSSLRPFVRHCFPLSSTLLMVGC 60
           M +   V   +   Y D  YWD R+  E   ++W++ YS  +  +      SS++L +GC
Sbjct: 1   MENPNSVGPPSALTYLDPHYWDERFSSEE-HYEWFKDYSHFQHLIISNIKPSSSVLELGC 59

Query: 61  GNAVMSEDMVKDGYEDIVNIDISSVAIDMMRRKY--EYIPQLKYMQMDVRDMSYFPDESF 118
           GN+ + E++ KDG  DI  ID+SSVA++ M+ +   +   ++K +Q D+ D+  F  ESF
Sbjct: 60  GNSQLCEELYKDGIVDITCIDLSSVAVEKMQSRLLPKGYKEIKVVQADMLDLP-FDSESF 118

Query: 119 DGVIDKGTLDSLMCGTD-----APISASQMLAE---VCRLLKPGGSYMLITYGDPTVRMP 170
           D VI+KGT+D L           P + S+++A    V R+LKP G ++ IT+G P  R P
Sbjct: 119 DVVIEKGTMDVLFVDAGDPWNPRPETVSKVMATLDGVHRVLKPDGIFISITFGQPHFRRP 178

Query: 171 HLSKPVYNWKITLYNIPRPGFQ 192
               P + W +  YN    GF 
Sbjct: 179 LFKDPKFTWSME-YNTFGDGFH 199


>AT2G31740.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr2:13491053-13495009 REVERSE LENGTH=760
          Length = 760

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)

Query: 21  WDTRYIQEGG--SFDWYQRYSSLR-------PFVRHCFPLSSTLLMVGCGNAVMSEDMVK 71
           WD  +   G   SF+WY  +  L                 S  +L+ GCGN+ ++E +  
Sbjct: 29  WDKFFTLRGNDDSFEWYAEWPQLHDSLLPLLQDSSSSSSDSLQILVPGCGNSRLTEHLYD 88

Query: 72  DGYEDIVNIDISSVAI-DMMRRKYEYIPQLKYMQMDVRDMSYFPDESFDGVIDKGTLDSL 130
            G+ DI N+D S V I DM+RR     P+L++  MD+  M    DESFD V+DKG LD+L
Sbjct: 89  AGFRDITNVDFSKVVISDMLRRNIRTRPELRWRVMDITKMQ-LADESFDTVLDKGALDAL 147

Query: 131 MCGTDAPISASQMLAEVCRLLKPGGSYMLITYGDPTVRMPHLSKPVYNWKITLYNIPR 188
           M         +Q L+E  R+LKPGG ++ +T  +  V     S+  + WK+ +++I +
Sbjct: 148 MEPEVGTKLGNQYLSEAKRVLKPGGKFICLTLAESHVLALLFSRFRFGWKMNVHSIAQ 205


>AT1G66680.1 | Symbols: AR401 | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:24866352-24868888 REVERSE LENGTH=358
          Length = 358

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 7/137 (5%)

Query: 54  TLLMVGCGNAVMSEDMVKDGYEDIVNIDISSVAIDMMRR--KYEYIPQLKYMQMDVRDMS 111
            +L +G GN ++   + K+G+ D+   D S  A+++ +   + +  P +++M  D+ D  
Sbjct: 172 NVLDLGTGNGLLLHQLAKEGFSDLTGTDYSDGAVELAQHLSQRDGFPNIRFMVDDILDTK 231

Query: 112 YFPDESFDGVIDKGTLDSLMCGTDAPISASQMLAEVCRLLKPGGSYMLITYGDPTVRMPH 171
              ++ F  V+DKGTLD++    D P+        V +L+ PGG  ++IT  + T     
Sbjct: 232 L--EQQFKLVMDKGTLDAIGLHPDGPVKRVMYWDSVSKLVAPGG-ILVITSCNHT--KDE 286

Query: 172 LSKPVYNWKITLYNIPR 188
           L + V N+ I   N+ R
Sbjct: 287 LVEEVENFNIRKSNLCR 303