Miyakogusa Predicted Gene

Lj3g3v3640170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3640170.1 Non Chatacterized Hit- tr|I3SJB5|I3SJB5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.64,0,seg,NULL;
Scramblase,Scramblase; UNCHARACTERIZED,NULL; PHOSPHOLIPID
SCRAMBLASE-RELATED,Scramblase,CUFF.46141.1
         (337 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G04940.1 | Symbols:  | scramblase-related | chr2:1736671-1740...   436   e-123

>AT2G04940.1 | Symbols:  | scramblase-related | chr2:1736671-1740254
           REVERSE LENGTH=392
          Length = 392

 Score =  436 bits (1122), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 213/316 (67%), Positives = 242/316 (76%), Gaps = 9/316 (2%)

Query: 31  VSRRFGSKVDYQ---LTRDFLVKLWVADFKMXXXXXXXXXXXXXXXXXXXXXXXK----- 82
           V R F S  D     L R FL +LWVAD K                              
Sbjct: 77  VFRCFCSGSDTSPPSLDRKFLAQLWVADKKKLKAMEKRYKKASKHRNYTENDGFDVHFET 136

Query: 83  -HGVVKQPPVSQSVTGFLEPHSPQEAMVAPLLARSNLLITRDIEWANLVLGFEQENRYAI 141
               V+QPPVSQS++G L+P +  EA +A LLARSNLL+TRDIEWANLVLGFEQENRY +
Sbjct: 137 VEPTVEQPPVSQSMSGLLKPKTSDEAKIATLLARSNLLVTRDIEWANLVLGFEQENRYIV 196

Query: 142 VDACYPQSPVGFMREQSNVITRQLLRLRRPFVAYITDAMGNELFRVRRPFWWITSSIYAE 201
           VD CYP++PVG +REQSN++ RQLLR RRPFVA ITDA+GNELFRVRRPFWW+TSSIYAE
Sbjct: 197 VDVCYPEAPVGSIREQSNLLARQLLRTRRPFVASITDALGNELFRVRRPFWWLTSSIYAE 256

Query: 202 IDGKEIGVVHRRWHLWRRIYDLYLGNKQFAVVENPGLWNWTFTLKDINGEVLGQIDRDWR 261
           IDG+EIGVVHRRWHLWRRIYDLYLGN QFAVVENPG WNWTFT+KD +GEVL QIDRDWR
Sbjct: 257 IDGEEIGVVHRRWHLWRRIYDLYLGNNQFAVVENPGFWNWTFTVKDADGEVLAQIDRDWR 316

Query: 262 GFGFEILTDAGQYVIRFGSSDPSSKIGLASAIQDLEVSRPLTLAERAVAVALAISLDNDY 321
           GFGFEI TDAGQYVIRFG +D ++K G A+ +++LEV RPLTL+ERAV + LAISLDNDY
Sbjct: 317 GFGFEIFTDAGQYVIRFGKADAAAKTGPATLVEELEVKRPLTLSERAVVLTLAISLDNDY 376

Query: 322 FSRHGGWGLPFMAVTE 337
           FSRHGGWG+PFMAV E
Sbjct: 377 FSRHGGWGIPFMAVGE 392