Miyakogusa Predicted Gene

Lj3g3v3640130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3640130.1 Non Chatacterized Hit- tr|C5XYB0|C5XYB0_SORBI
Putative uncharacterized protein Sb04g027330
OS=Sorghu,50,2e-19,HEAT-SHOCK PROTEIN 22,NULL; SMALL HEAT-SHOCK
PROTEIN (HSP20) FAMILY,NULL; HSP20,Alpha crystallin/Hsp,CUFF.46161.1
         (210 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G51440.1 | Symbols:  | HSP20-like chaperones superfamily prot...   144   5e-35
AT4G25200.1 | Symbols: ATHSP23.6-MITO, HSP23.6-MITO | mitochondr...   143   9e-35
AT4G27670.1 | Symbols: HSP21 | heat shock protein 21 | chr4:1381...    99   2e-21
AT5G37670.1 | Symbols:  | HSP20-like chaperones superfamily prot...    77   1e-14
AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily prot...    65   2e-11
AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily prot...    64   5e-11
AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily prot...    63   1e-10
AT1G52560.1 | Symbols:  | HSP20-like chaperones superfamily prot...    62   4e-10
AT1G52560.2 | Symbols:  | HSP20-like chaperones superfamily prot...    61   4e-10
AT2G29500.1 | Symbols:  | HSP20-like chaperones superfamily prot...    52   3e-07
AT3G46230.1 | Symbols: ATHSP17.4, HSP17.4 | heat shock protein 1...    50   9e-07
AT5G59720.1 | Symbols: HSP18.2 | heat shock protein 18.2 | chr5:...    49   2e-06
AT5G47600.1 | Symbols:  | HSP20-like chaperones superfamily prot...    49   3e-06

>AT5G51440.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr5:20891242-20892013 FORWARD LENGTH=210
          Length = 210

 Score =  144 bits (362), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 86/185 (46%), Positives = 111/185 (60%), Gaps = 18/185 (9%)

Query: 27  TASASRSFNTNAMRRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDPFSPTRSLFQVLN 86
            A++SR FNTNA R Y                              DPF+PTRSL Q+LN
Sbjct: 30  VAASSRLFNTNAARNYEDGVDRNHHSNRHVSRHGGDFFSHI----LDPFTPTRSLSQMLN 85

Query: 87  TVDQLMNSPFITPPTRSLSQVLNTVDQLKNNPRGARNGWDARETEDALLLRVNMPGLGKE 146
            +DQ+   P ++  TR +               G R GW+ +E +DAL LR++MPGL +E
Sbjct: 86  FMDQVSEIPLVS-ATRGMG------------ASGVRRGWNVKEKDDALHLRIDMPGLSRE 132

Query: 147 DVKIAVEQNTLTIRGEGPKESEEEVGG-GLRYTSRIDLPDKLYKIDQIKAEMKNGVLKVT 205
           DVK+A+EQNTL IRGEG  E  E+V G G R+TSRI+LP+K+YK D+IKAEMKNGVLKV 
Sbjct: 133 DVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVV 192

Query: 206 VPKMK 210
           +PK+K
Sbjct: 193 IPKIK 197


>AT4G25200.1 | Symbols: ATHSP23.6-MITO, HSP23.6-MITO |
           mitochondrion-localized small heat shock protein 23.6 |
           chr4:12917089-12917858 FORWARD LENGTH=210
          Length = 210

 Score =  143 bits (360), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/186 (47%), Positives = 111/186 (59%), Gaps = 17/186 (9%)

Query: 28  ASASRSFNTNAMRRYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDPFSPTRSLFQVLNT 87
           A +SR FNTNA+R Y                             +DPFSPTRS+ QVLN 
Sbjct: 26  AVSSRLFNTNAVRSYDDDGENGDGVDLYRRSVPRRRGDFFSDV-FDPFSPTRSVSQVLNL 84

Query: 88  VDQLMNSPFITPPTRSLSQVLNTVDQLKNNPRGARNGWDARETEDALLLRVNMPGLGKED 147
           +DQ M +P ++  TR +               GAR GWD +E +DAL LR++MPGL +ED
Sbjct: 85  MDQFMENPLLS-ATRGMG------------ASGARRGWDIKEKDDALYLRIDMPGLSRED 131

Query: 148 VKIAVEQNTLTIRGEGPKESEEEVGGGL---RYTSRIDLPDKLYKIDQIKAEMKNGVLKV 204
           VK+A+EQ+TL IRGEG  E +    G     R+TSRI LPDK+YKID+IKAEMKNGVLKV
Sbjct: 132 VKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKV 191

Query: 205 TVPKMK 210
            +PKMK
Sbjct: 192 VIPKMK 197


>AT4G27670.1 | Symbols: HSP21 | heat shock protein 21 |
           chr4:13819048-13819895 REVERSE LENGTH=227
          Length = 227

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/141 (41%), Positives = 84/141 (59%), Gaps = 14/141 (9%)

Query: 73  DPFSPTRSLFQVLNTVDQLMNSPFITPPTRSLSQVLNTVDQLKNNPRGARNGWDARETED 132
           DP SP R++ Q+L+T+D++      T P    ++  + V ++       R  WD +E E 
Sbjct: 87  DPLSPMRTMRQMLDTMDRMFED---TMPVSGRNRGGSGVSEI-------RAPWDIKEEEH 136

Query: 133 ALLLRVNMPGLGKEDVKIAVEQNTLTIRGEGPKESEEEVGGGL---RYTSRIDLPDKLYK 189
            + +R +MPGL KEDVKI+VE N L I+GE  KE  ++   G     Y +R+ LPD   K
Sbjct: 137 EIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK 196

Query: 190 IDQIKAEMKNGVLKVTVPKMK 210
            D+IKAE+KNGVL +T+PK K
Sbjct: 197 -DKIKAELKNGVLFITIPKTK 216


>AT5G37670.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr5:14969035-14969448 FORWARD LENGTH=137
          Length = 137

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 14/96 (14%)

Query: 126 DARETEDALLLRVNMPGLGKEDVKIAVEQ-NTLTIRGEGPKESEEE------------VG 172
           D  E+ ++ + ++N+PG  KED+K+ +E+ N L+IRGEG KE ++E             G
Sbjct: 25  DWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSG 84

Query: 173 GGLRYTSRIDLPDKLYKIDQIKAEMKNGVLKVTVPK 208
           GG  +  RI+LP+ + K+DQ+KA ++NGVL V VPK
Sbjct: 85  GGSEFLRRIELPENV-KVDQVKAYVENGVLTVVVPK 119


>AT1G53540.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19980510-19980983 FORWARD LENGTH=157
          Length = 157

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 11/93 (11%)

Query: 126 DARETEDALLLRVNMPGLGKEDVKIAVEQ-NTLTIRGEGPKESEE--------EVGGGLR 176
           D RET +A + + ++PGL KE+VK+ VE  N L I GE   E+EE        E   G +
Sbjct: 53  DWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSG-K 111

Query: 177 YTSRIDLPDKLYKIDQIKAEMKNGVLKVTVPKM 209
           +T R  LP+   K+++IKA M+NGVL VTVPK+
Sbjct: 112 FTRRFRLPENA-KMEEIKASMENGVLSVTVPKV 143


>AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:2275148-2275621 FORWARD LENGTH=157
          Length = 157

 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 9/93 (9%)

Query: 126 DARETEDALLLRVNMPGLGKEDVKIAVEQNT-LTIRGEGPKESEEEVGGGLR-------Y 177
           D +ET +A + + ++PG+ KE+VK+ +E ++ L I GE   E EE+     R       +
Sbjct: 51  DWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQF 110

Query: 178 TSRIDLPDKLYKIDQIKAEMKNGVLKVTVPKMK 210
           + +  LP+ + K+DQ+KA M+NGVL VTVPK++
Sbjct: 111 SRKFKLPENV-KMDQVKASMENGVLTVTVPKVE 142


>AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:22031474-22031941 FORWARD LENGTH=155
          Length = 155

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 9/93 (9%)

Query: 126 DARETEDALLLRVNMPGLGKEDVKIAVEQNT-LTIRGEGPKESEEEVGGGLR-------Y 177
           D +ET +A + + ++PG+ KE+VK+ +E ++ L I GE   E EE+     R       +
Sbjct: 49  DWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGF 108

Query: 178 TSRIDLPDKLYKIDQIKAEMKNGVLKVTVPKMK 210
           + +  LP+ + K+DQ+KA M+NGVL VTVPK++
Sbjct: 109 SRKFRLPENV-KMDQVKASMENGVLTVTVPKVE 140


>AT1G52560.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19574783-19575766 REVERSE LENGTH=232
          Length = 232

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 14/93 (15%)

Query: 127 ARETEDALLLRVNMPGLGKEDVKIAVEQNTLTIRGEGPKESEEEVGGGLR---------- 176
            +E +D   LR  +PGL KEDVKI V    LTI+G+   ++EEE G              
Sbjct: 129 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGD--HKAEEEKGSPEEDEYWSSKSYG 186

Query: 177 -YTSRIDLPDKLYKIDQIKAEMKNGVLKVTVPK 208
            Y + + LPD   K++ IKAE+KNGVL + +P+
Sbjct: 187 YYNTSLSLPDDA-KVEDIKAELKNGVLNLVIPR 218


>AT1G52560.2 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:19574783-19575766 REVERSE LENGTH=225
          Length = 225

 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 14/93 (15%)

Query: 127 ARETEDALLLRVNMPGLGKEDVKIAVEQNTLTIRGEGPKESEEEVGGGLR---------- 176
            +E +D   LR  +PGL KEDVKI V    LTI+G+   ++EEE G              
Sbjct: 122 VKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGD--HKAEEEKGSPEEDEYWSSKSYG 179

Query: 177 -YTSRIDLPDKLYKIDQIKAEMKNGVLKVTVPK 208
            Y + + LPD   K++ IKAE+KNGVL + +P+
Sbjct: 180 YYNTSLSLPDDA-KVEDIKAELKNGVLNLVIPR 211


>AT2G29500.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr2:12633279-12633740 REVERSE LENGTH=153
          Length = 153

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 31/145 (21%)

Query: 72  YDPFSPTRSLFQVLNTVDQLMNSPFITPPTRSLSQVLNTVDQLKNNPRGARNGWDARETE 131
           +DPFS       V +   +L +S      +R  S ++N           AR  W  RET 
Sbjct: 17  FDPFS-----LDVWDPFKELTSSSL----SRENSAIVN-----------ARVDW--RETP 54

Query: 132 DALLLRVNMPGLGKEDVKIAVEQNT-LTIRGEGPKESEEEVGGGLR-------YTSRIDL 183
           +A + + ++PGL KE+VK+ +E+++ L I GE   E E++     R       +T R  L
Sbjct: 55  EAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRL 114

Query: 184 PDKLYKIDQIKAEMKNGVLKVTVPK 208
           P+ + K+DQ+KA M+NGVL VTVPK
Sbjct: 115 PENV-KMDQVKAAMENGVLTVTVPK 138


>AT3G46230.1 | Symbols: ATHSP17.4, HSP17.4 | heat shock protein 17.4
           | chr3:16984263-16984733 REVERSE LENGTH=156
          Length = 156

 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 9/93 (9%)

Query: 126 DARETEDALLLRVNMPGLGKEDVKIAV-EQNTLTIRGEGPKESEEEVGGGLR-------Y 177
           D RET +A + + ++PGL KE+VK+ V + N L I GE   E+EE+     R       +
Sbjct: 52  DWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKF 111

Query: 178 TSRIDLPDKLYKIDQIKAEMKNGVLKVTVPKMK 210
             R  LP+   K++++KA M+NGVL VTVPK++
Sbjct: 112 MRRFRLPENA-KVEEVKASMENGVLSVTVPKVQ 143


>AT5G59720.1 | Symbols: HSP18.2 | heat shock protein 18.2 |
           chr5:24062632-24063117 FORWARD LENGTH=161
          Length = 161

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 11/92 (11%)

Query: 126 DARETEDALLLRVNMPGLGK-EDVKIAVEQNTLTIRGEGPKESEE--------EVGGGLR 176
           D +ET +A + + ++PGL K E      ++N L I GE  KE+EE        E   G +
Sbjct: 55  DWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASG-K 113

Query: 177 YTSRIDLPDKLYKIDQIKAEMKNGVLKVTVPK 208
           +  R  LP+   K++++KA M+NGVL V VPK
Sbjct: 114 FMRRFRLPENA-KMEEVKATMENGVLTVVVPK 144


>AT5G47600.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr5:19299945-19300456 REVERSE LENGTH=131
          Length = 131

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 120 GARNGWDARETEDALLLRVNMPGLGKEDVKIAVEQNTLTIRGEGPKESEEEVGGGLRYTS 179
           G++  ++  ET+ + + RV+MPG  + D+   V+ N +    + P   E E   G +Y  
Sbjct: 27  GSQAVYEVTETKKSCVTRVDMPGCPESDLTYWVDANNVHFFADEPAMPEYE-NAGRKYGG 85

Query: 180 RIDLPDKLYKIDQIKAEMKNGVLKVTVPKM 209
            +    + Y + + K ++ NGVL +TVPK+
Sbjct: 86  SMIFNPEAYDVKKTKVKLINGVLWITVPKI 115