Miyakogusa Predicted Gene

Lj3g3v3639950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3639950.1 Non Chatacterized Hit- tr|K4BFJ8|K4BFJ8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,63.89,2e-16,seg,NULL,CUFF.46127.1
         (464 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17520.1 | Symbols: RCP1, MEX1 | root cap 1 (RCP1) | chr5:577...   410   e-114
AT5G17523.1 | Symbols:  | Similar to Maltose excess protein 1 | ...   172   5e-43

>AT5G17520.1 | Symbols: RCP1, MEX1 | root cap 1 (RCP1) |
           chr5:5772796-5775231 REVERSE LENGTH=415
          Length = 415

 Score =  410 bits (1053), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/359 (55%), Positives = 251/359 (69%), Gaps = 3/359 (0%)

Query: 100 NISTAHRLFASPRRRHNFSLNALDSDAPRPHQQGSVDIGRDESYQQWDSLTAKFSAAANV 159
           +I +  RL   P R  N   ++ DSD P  +QQG+  +G+ + YQ+WDS TAKFS  AN+
Sbjct: 59  SIVSTRRLV--PVRSINSESDS-DSDFPHENQQGNPGLGKFKEYQEWDSWTAKFSGGANI 115

Query: 160 PFLLLQMPQILLNARNLAAGNKTALLAVPWXXXXXXXXXXXXXXXYFAKKKEKEAMVVQT 219
           PFL+LQ+PQI+LN +NL AGN TAL AVPW               YFAKK+EKEA VVQT
Sbjct: 116 PFLMLQLPQIILNTQNLLAGNNTALSAVPWLGMLTGLLGNLSLLSYFAKKREKEAAVVQT 175

Query: 220 LGVVSTYVVIAQLALAEAMPLPYFLATSVIVGSGLFLNFMNYFGLLNAGIWSFWEDFITV 279
           LGVVST++V+AQL +AEAMP+ YF+ATS +V  GL +N + YFG L+  +W  WED IT+
Sbjct: 176 LGVVSTHIVLAQLTMAEAMPIQYFVATSAVVTIGLIVNCLYYFGKLSKTVWQLWEDVITI 235

Query: 280 GGLSVLPQIMWSTFVPFIPNSILPGXXXXXXXXXXXXXXRTGKLSEEGVKFVGGISGWTA 339
           GGLSVLPQIMWSTFVP +PNSILPG              RTGKLSE+GV+FVG +SGWTA
Sbjct: 236 GGLSVLPQIMWSTFVPLVPNSILPGTTAFGIAVAAIIMARTGKLSEKGVRFVGSLSGWTA 295

Query: 340 TLLFMWMPVSQMWTNILNPENMKGLSAFSXXXXXXXXXXXXXXXXXXXXXMWFIGSSWAT 399
           TL+FMWMPVSQMWTN LNP+N+KGLS+ +                     MW  GS WAT
Sbjct: 296 TLMFMWMPVSQMWTNFLNPDNIKGLSSITMLLSMMGNGLMIPRALFIRDLMWLTGSLWAT 355

Query: 400 LFYGYGNLACLFVLNIISKEFFLAATVGLVAWIGMAFWRDSAVHGHNSPLASIRDLVFG 458
           LFYGYGN+ CL+++N  S+ FF+AAT+GL++WIG+A WRD+  +GHNSP  S+++LVFG
Sbjct: 356 LFYGYGNILCLYLVNCTSQSFFVAATIGLISWIGLALWRDAVAYGHNSPFRSLKELVFG 414


>AT5G17523.1 | Symbols:  | Similar to Maltose excess protein 1 |
           chr5:5775768-5777231 REVERSE LENGTH=261
          Length = 261

 Score =  172 bits (436), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 90/167 (53%), Positives = 115/167 (68%), Gaps = 3/167 (1%)

Query: 100 NISTAHRLFASPRRRHNFSLNALDSDAPRPHQQGSVDIGRDESYQQWDSLTAKFSAAANV 159
           +I +  RL   P R  N   ++ DSD P  +QQG+  +G+ + YQ+WDS TAKFS  AN+
Sbjct: 59  SIVSTRRLV--PVRSINSESDS-DSDFPHENQQGNPGLGKFKEYQEWDSWTAKFSGGANI 115

Query: 160 PFLLLQMPQILLNARNLAAGNKTALLAVPWXXXXXXXXXXXXXXXYFAKKKEKEAMVVQT 219
           PFL+LQ+PQI+LN +NL AGN TAL AVPW               YFAKK+EKEA VVQT
Sbjct: 116 PFLMLQLPQIILNTQNLLAGNNTALSAVPWLGMLTGLLGNLSLLSYFAKKREKEAAVVQT 175

Query: 220 LGVVSTYVVIAQLALAEAMPLPYFLATSVIVGSGLFLNFMNYFGLLN 266
           LGVVST++V+AQL +AEAMP+ YF+ATS +V  GL +N + YFG LN
Sbjct: 176 LGVVSTHIVLAQLTMAEAMPIQYFVATSAVVTIGLIVNCLYYFGKLN 222