Miyakogusa Predicted Gene

Lj3g3v3639840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3639840.1 Non Chatacterized Hit- tr|I1LP37|I1LP37_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,65.5,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; ORIGIN RECOGNITION COMPLEX SUBUNIT 3,Origin
recognition complex,,CUFF.46105.1
         (735 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16690.1 | Symbols: ORC3, ATORC3 | origin recognition complex...   665   0.0  

>AT5G16690.1 | Symbols: ORC3, ATORC3 | origin recognition complex
           subunit 3 | chr5:5474410-5479878 FORWARD LENGTH=734
          Length = 734

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/723 (46%), Positives = 470/723 (65%), Gaps = 18/723 (2%)

Query: 16  AERDLQPFFVLHKASTGRKDRTSNGQGKLRKRNEPSSSSPKCGKKLEGSMSEGGDRLLFE 75
           AE D++PFFVLHKAS+G  +    G  K ++R E  S SPK  K+ E    E  D   F 
Sbjct: 25  AENDIRPFFVLHKASSGNHNGKLTGIVKSKRRIE--SPSPKIAKRSEVESVEEEDGQFFS 82

Query: 76  QQQVEAFDIVWAKIESTIKDVLRDQNASVFNNIQQWVLECFNATRLLGEPSIAEATRSFP 135
             + + F+ VW+KIE TI+DVLR+ N+ VF+ I  W+ E F +    G   ++EA RS+P
Sbjct: 83  TLRFKVFETVWSKIEKTIEDVLRNSNSKVFSGIHDWIRESFESIISSGALKLSEAVRSYP 142

Query: 136 VLNNTTPGQLFTALVITRNMEFVDDILTFEELSHCLKSHGCHVAMLSSLEFSLKNGIAGC 195
           VL   +  QL TA+V+TRN+E VDD+LTFEEL   LKS GCHVA LSS++FS K+G+ GC
Sbjct: 143 VLTQASSKQLLTAMVLTRNLEMVDDLLTFEELELHLKSQGCHVAKLSSMDFSAKSGVGGC 202

Query: 196 LKALLREFLGCAIDTADISILASWYREQDSYNKPLVLIINDLERCCGSVLTDFILMLSEW 255
           L+ LLR+F+   +D AD++ILASWYRE  ++  P+V+I++D ERCCG VL+D IL+LSEW
Sbjct: 203 LRGLLRQFVMPTVDVADVTILASWYRENKNHENPVVIIVDDTERCCGPVLSDLILILSEW 262

Query: 256 VVKVPIILIFGVATTVDAPRNILPSHALEHLCLSKFMLGAPAERMDAIVEAVLVKHCTTF 315
            +KVPI LI GV+T  DAPR IL  +AL+ LC ++F L +PAERMDA+++AV +K C+ F
Sbjct: 263 AIKVPIFLIMGVSTAHDAPRKILSVNALQRLCATRFTLSSPAERMDAVLKAVFLKPCSGF 322

Query: 316 NIGYKVALFLRNYFINQDGTVTSFIRALKVACLLHFSMEPLSLIHGQILAE--DQKEGK- 372
            + +KVALF+R+YF+ QDGT+TSF+R LK+ACL HFS+EPLS++      +  +Q  G+ 
Sbjct: 323 TVSHKVALFMRSYFLCQDGTLTSFVRTLKIACLQHFSLEPLSIMLEHFCHDGVNQLSGEG 382

Query: 373 SAFLPETMLKYMDELPSYARNQMDDQTKESMAKGLSELVTVQKLWSTVVLCLYEAGKYSK 432
           +  L E  +K+  +LPS  RN++   T E +   L +L  +   WS VVLCLYEAGK+ K
Sbjct: 383 TELLTEATMKHAFDLPSVTRNKITRSTFEMLPHFLLDLQRMPNPWSIVVLCLYEAGKFDK 442

Query: 433 VQLLDLLCEALNKDLYPLRDSSCQEGDEKDNGVSLTNEPCQQYSIMQSNGFICQIGRKVR 492
           ++LLD+ CE L+ +   L+  S  E         + N    Q      N  I ++ RK+R
Sbjct: 443 LRLLDIFCEILDPEARYLKYFSPSE---------IVN---SQSHNSGRNNVIRRVLRKLR 490

Query: 493 DLPTGMLYRLIESWEKLTADIPEIHQKLKKLQSSVAREGGKSPRKSSKDISKRYTSRVSV 552
           DL    L  +++SWE LTA+  EI+ K+ +L   +        R+   +  K++ SR + 
Sbjct: 491 DLSPSQLSSMLKSWENLTAEFTEINDKVIELHPFMRAVEAAGQRQGLPNSPKKHASRSNS 550

Query: 553 NTDKDSRTLNSQAGTFLDYLIRNFLRPIEGMPFHEFFCFKNVEKLQLVLNGDPRKRIQVD 612
             +K+ + +  +  T +++++R +++P+E +PFHE  CFKNV+KLQ  L GDPR RIQ+D
Sbjct: 551 KLEKELKAMTDKVATVIEFMLREYMKPVESVPFHEILCFKNVDKLQSALLGDPRGRIQLD 610

Query: 613 LLEFHKILGCSCCYKSGNALLSSWHDSSIMYSLGQEHGDLINLHDWFQAFKTIVLQNTNX 672
           LLE H IL C CC + G  LL S HD+SI+Y L QEH D+INLHDW+Q+FKTI++  ++ 
Sbjct: 611 LLESHDILHCVCCSQRGTTLLPSMHDTSILYKLAQEHADVINLHDWYQSFKTILIPRSSK 670

Query: 673 XXXXXXXXXXXXXXXDM-NGSGNENEASIQARFCRAITELQITGLIRMPSKRRPDFVQRV 731
                          ++        EA IQARFCRA+ ELQITGLIRMPSKRRPDFVQRV
Sbjct: 671 AKQKSKSSSKSKKRKEICEEPEAPAEALIQARFCRAVMELQITGLIRMPSKRRPDFVQRV 730

Query: 732 AFG 734
           AFG
Sbjct: 731 AFG 733