Miyakogusa Predicted Gene
- Lj3g3v3639570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3639570.1 Non Chatacterized Hit- tr|Q25BL9|Q25BL9_BRAOL
Heat shock factor, putative OS=Brassica oleracea
GN=23,36.36,4e-18,HEAT STRESS TRANSCRIPTION FACTOR,NULL; HEAT SHOCK
TRANSCRIPTION FACTOR,NULL; seg,NULL,CUFF.46076.1
(348 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16820.2 | Symbols: HSF3, HSFA1B, ATHSFA1B | heat shock facto... 201 6e-52
AT5G16820.1 | Symbols: HSF3, HSFA1B, ATHSFA1B, ATHSF3 | heat sho... 201 6e-52
AT3G02990.1 | Symbols: ATHSFA1E, HSFA1E | heat shock transcripti... 171 8e-43
AT1G32330.1 | Symbols: ATHSFA1D, HSFA1D | heat shock transcripti... 134 7e-32
AT4G17750.1 | Symbols: HSF1, HSFA1A, ATHSF1, ATHSFA1A | heat sho... 122 4e-28
AT3G51910.1 | Symbols: AT-HSFA7A, HSFA7A | heat shock transcript... 62 7e-10
AT3G22830.1 | Symbols: AT-HSFA6B, HSFA6B | heat shock transcript... 62 8e-10
AT2G26150.1 | Symbols: ATHSFA2, HSFA2 | heat shock transcription... 61 1e-09
AT2G26150.2 | Symbols: ATHSFA2, HSFA2 | heat shock transcription... 61 1e-09
AT1G67970.1 | Symbols: AT-HSFA8, HSFA8 | heat shock transcriptio... 54 1e-07
AT5G03720.1 | Symbols: AT-HSFA3, HSFA3 | heat shock transcriptio... 50 2e-06
>AT5G16820.2 | Symbols: HSF3, HSFA1B, ATHSFA1B | heat shock factor 3
| chr5:5530446-5532497 FORWARD LENGTH=481
Length = 481
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 194/361 (53%), Gaps = 57/361 (15%)
Query: 1 MQELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFVQQ-QNES 59
MQELVRLRQQQQ+T+NQLQ VGQ+VQVMEQRQ QMMSFLAKA+ SPG L Q VQQ N+
Sbjct: 162 MQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAKAVQSPGFLNQLVQQNNNDG 221
Query: 60 NRHISGV-KKRRLHRQXXXXXXXXXXSLATKHLHNALDGHVVKYQPSINEAAKALLRQIL 118
NR I G KKRRL ++ N L+ +V+YQPSINEAA+ +LRQ L
Sbjct: 222 NRQIPGSNKKRRLPVDEQENR--------GDNVANGLNRQIVRYQPSINEAAQNMLRQFL 273
Query: 119 QKNNSTRMESSIKNPDAFLIDDVPSAIALDSSGSFTQVSGVTLSEVPPISGQPCVAVESQ 178
+ S R ES NPD+FL+ DVPS+ ++D+ ++VSGVTL+E P +
Sbjct: 274 NTSTSPRYESVSNNPDSFLLGDVPSSTSVDNGNPSSRVSGVTLAEFSPNT---------- 323
Query: 179 FPVSCMTNSMSEVQPPPAVLTDCVSTAEFPELMARSCQDSVLDFGKVQGSGTE-SGSMNP 237
V TN + E S A P+ A Q ++ G+ G + S +P
Sbjct: 324 --VQSATNQVPE-----------ASLAHHPQ--AGLVQPNI---GQSPAQGAAPADSWSP 365
Query: 238 ALSFAGSNIGSEPEIEAMSTVLDGTQSLEANAFSPDA--------DVISKLPGINDEFWE 289
G S + + VLD + E +A SP+ + + KLPGI D FWE
Sbjct: 366 EFDLVGCETDSGECFDPIMAVLDES---EGDAISPEGEGKMNELLEGVPKLPGIQDPFWE 422
Query: 290 QFFSPS-PLTGDTDEVESSSL-GYGLTEDQEYEKEIQQEKMDKKQYIDHLSHQMELLASE 347
QFFS P DTD++ S S+ L +QE + + E Q + +L+ QM LL+SE
Sbjct: 423 QFFSVELPAIADTDDILSGSVENNDLVLEQEPNEWTRNE-----QQMKYLTEQMGLLSSE 477
Query: 348 S 348
+
Sbjct: 478 A 478
>AT5G16820.1 | Symbols: HSF3, HSFA1B, ATHSFA1B, ATHSF3 | heat shock
factor 3 | chr5:5530446-5532497 FORWARD LENGTH=481
Length = 481
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 194/361 (53%), Gaps = 57/361 (15%)
Query: 1 MQELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFVQQ-QNES 59
MQELVRLRQQQQ+T+NQLQ VGQ+VQVMEQRQ QMMSFLAKA+ SPG L Q VQQ N+
Sbjct: 162 MQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAKAVQSPGFLNQLVQQNNNDG 221
Query: 60 NRHISGV-KKRRLHRQXXXXXXXXXXSLATKHLHNALDGHVVKYQPSINEAAKALLRQIL 118
NR I G KKRRL ++ N L+ +V+YQPSINEAA+ +LRQ L
Sbjct: 222 NRQIPGSNKKRRLPVDEQENR--------GDNVANGLNRQIVRYQPSINEAAQNMLRQFL 273
Query: 119 QKNNSTRMESSIKNPDAFLIDDVPSAIALDSSGSFTQVSGVTLSEVPPISGQPCVAVESQ 178
+ S R ES NPD+FL+ DVPS+ ++D+ ++VSGVTL+E P +
Sbjct: 274 NTSTSPRYESVSNNPDSFLLGDVPSSTSVDNGNPSSRVSGVTLAEFSPNT---------- 323
Query: 179 FPVSCMTNSMSEVQPPPAVLTDCVSTAEFPELMARSCQDSVLDFGKVQGSGTE-SGSMNP 237
V TN + E S A P+ A Q ++ G+ G + S +P
Sbjct: 324 --VQSATNQVPE-----------ASLAHHPQ--AGLVQPNI---GQSPAQGAAPADSWSP 365
Query: 238 ALSFAGSNIGSEPEIEAMSTVLDGTQSLEANAFSPDA--------DVISKLPGINDEFWE 289
G S + + VLD + E +A SP+ + + KLPGI D FWE
Sbjct: 366 EFDLVGCETDSGECFDPIMAVLDES---EGDAISPEGEGKMNELLEGVPKLPGIQDPFWE 422
Query: 290 QFFSPS-PLTGDTDEVESSSL-GYGLTEDQEYEKEIQQEKMDKKQYIDHLSHQMELLASE 347
QFFS P DTD++ S S+ L +QE + + E Q + +L+ QM LL+SE
Sbjct: 423 QFFSVELPAIADTDDILSGSVENNDLVLEQEPNEWTRNE-----QQMKYLTEQMGLLSSE 477
Query: 348 S 348
+
Sbjct: 478 A 478
>AT3G02990.1 | Symbols: ATHSFA1E, HSFA1E | heat shock transcription
factor A1E | chr3:673614-675988 FORWARD LENGTH=468
Length = 468
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 178/349 (51%), Gaps = 41/349 (11%)
Query: 1 MQELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFVQQQNESN 60
MQELVRLRQQQQ T++ LQ VGQ+V VMEQRQ QMMSFLAKA+ SPG L QF QQ NE+N
Sbjct: 157 MQELVRLRQQQQVTEHHLQNVGQKVHVMEQRQQQMMSFLAKAVQSPGFLNQFSQQSNEAN 216
Query: 61 RHIS-GVKKRRLHRQXXXXXXXXXXSLATKHLHNALDGHVVKYQPSINEAAKALLRQILQ 119
+HIS KKRRL + + H N L +V+YQ S+N+A +L+QI Q
Sbjct: 217 QHISESNKKRRLPVEDQMN--------SGSHGVNGLSRQIVRYQSSMNDATNTMLQQIQQ 268
Query: 120 KNNSTRMESSIKNPDAFLIDDVPSAIALDSSGSFTQVSGVTLSEVPPISGQPCVAVESQF 179
+N+ ES N +FL+ DVP++ D+ S VTL++V I A++
Sbjct: 269 MSNAPSHESLSSNNGSFLLGDVPNSNISDNGSSSNGSPEVTLADVSSIPAGFYPAMKYHE 328
Query: 180 PVSCMTNSMSEVQPPPAVLTDCVSTAEFPELMARSCQDSVLDFGKVQGSGTESGSMNPAL 239
P C TN + E P + D + + S D V G T++G
Sbjct: 329 P--CETNQVMETNLPFS-QGDLLPPTQGAAASGSSSSDLV-------GCETDNGEC---- 374
Query: 240 SFAGSNIGSEPEIEAMSTVLDGTQSLEANAFSPDADVISKLPGINDEFWEQFFSPSPLTG 299
++ + VLDG LEA+ + LP + D FWEQF SP+ G
Sbjct: 375 ------------LDPIMAVLDGALELEADTLN------ELLPEVQDSFWEQFIGESPVIG 416
Query: 300 DTDEVESSSLGYGLTEDQEYEKEIQQEKMDKKQYIDHLSHQMELLASES 348
+TDE+ S S+ L +Q + K Q ++HL+ QM LL S++
Sbjct: 417 ETDELISGSVENELILEQLELQSTLSNVWSKNQQMNHLTEQMGLLTSDA 465
>AT1G32330.1 | Symbols: ATHSFA1D, HSFA1D | heat shock transcription
factor A1D | chr1:11657265-11660234 REVERSE LENGTH=485
Length = 485
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 179/353 (50%), Gaps = 56/353 (15%)
Query: 1 MQELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFV---QQQN 57
MQELVRLRQQQQSTDNQLQ + QR+Q ME RQ Q+MSFLAKA+ SP L+QF+ QQN
Sbjct: 176 MQELVRLRQQQQSTDNQLQTMVQRLQGMENRQQQLMSFLAKAVQSPHFLSQFLQQQNQQN 235
Query: 58 ESNRHISGV-KKRRLHRQXXXXXXXXXXSLATKHLHNALDGHVVKYQPSINEAAKALLRQ 116
ESNR IS KKRR R + + DG +VKYQP ++E AKA+ +Q
Sbjct: 236 ESNRRISDTSKKRRFKRD----------GIVRNNDSATPDGQIVKYQPPMHEQAKAMFKQ 285
Query: 117 ILQKNNSTRMESSIKNPDAFLIDDVPSAI-ALDSSGSFTQVSGVTLSEVPPISGQPCVAV 175
++ +ME D FL+ + S + S QVSG+TL E+P S +
Sbjct: 286 LM------KMEPYKTGDDGFLLGNGTSTTEGTEMETSSNQVSGITLKEMPTAS-----EI 334
Query: 176 ESQFPVSCMTNSMSEVQPPPAVLTDCVSTAEFPELMARSCQDSVLDFGKVQGSGTESGSM 235
+S P+ ++S +C+ + P+ + ++ DF + E+ S
Sbjct: 335 QSSSPIETTPENVSAAS---EATENCIPS---PDDL------TLPDFTHML---PENNSE 379
Query: 236 NPALSFAGSNIGSEPEIEAMSTVLDGTQSLEANAFSPDADVISKLPGINDEFWEQFFSPS 295
P SF N+G + ++D + S + + F D+D+ ++ E+ S
Sbjct: 380 KPPESFMEPNLGGSSPLLDPDLLIDDSLSFDIDDFPMDSDIDP----VDYGLLERLLMSS 435
Query: 296 PLTGDTDEVESSSLGYGLTEDQEYEKEIQQEKMDKKQYIDHLSHQMELLASES 348
P+ D ++S+ + D E E+E Q DK +++D+L+ QM LL+ E+
Sbjct: 436 PV---PDNMDSTPV------DNETEQE--QNGWDKTKHMDNLTQQMGLLSPET 477
>AT4G17750.1 | Symbols: HSF1, HSFA1A, ATHSF1, ATHSFA1A | heat shock
factor 1 | chr4:9869969-9871603 REVERSE LENGTH=495
Length = 495
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 153/311 (49%), Gaps = 59/311 (18%)
Query: 1 MQELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFVQQQNESN 60
MQELV+LRQQQQ+TDN+LQ + + +QVMEQRQ Q+MSFLAKA+ +P L+QF+Q+Q +SN
Sbjct: 196 MQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIMSFLAKAVQNPTFLSQFIQKQTDSN 255
Query: 61 RHISGVKKRRLHRQXXXXXXXXXXSLATKHLHNALDGHVVKYQPSINEAAKALLRQILQK 120
H++ K+R R+ S + H A DG +VKYQP LR
Sbjct: 256 MHVTEANKKRRLRE---DSTAATESNSHSHSLEASDGQIVKYQP---------LR----- 298
Query: 121 NNSTRMESSIKNPDAFLIDDVPSAIALDSSGSFTQVSGVTLSEVPPIS---GQPCVAVES 177
N + M + +K D + LD S QVSGVTL EV PI+ Q +V S
Sbjct: 299 -NDSMMWNMMKTDDKYPF--------LDGFSSPNQVSGVTLQEVLPITSGQSQAYASVPS 349
Query: 178 QFPVSCMTNSMSEVQPPPAVLTDCVSTAEFPELMARSCQDSVLDFGKVQGSGTESGSMNP 237
P+S + ++ + + P ++ + T++ P+L ++S+ DF P
Sbjct: 350 GQPLSYLPSTSTSL--PDTIMPE---TSQIPQL----TRESINDF--------------P 386
Query: 238 ALSFAGSNIGSEPEIEAMSTVLDGTQ---SLEANAFSPDADVISKLPGINDEFWEQFFSP 294
+F + + S LDG LE P+ D + N EF E++
Sbjct: 387 TENFMDTEKNVPEAFISPSPFLDGGSVPIQLEGIPEDPEIDELMS----NFEFLEEYMPE 442
Query: 295 SPLTGDTDEVE 305
SP+ GD +E
Sbjct: 443 SPVFGDATTLE 453
>AT3G51910.1 | Symbols: AT-HSFA7A, HSFA7A | heat shock transcription
factor A7A | chr3:19265294-19266619 FORWARD LENGTH=272
Length = 272
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 44/58 (75%)
Query: 1 MQELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFVQQQNE 58
M E+V LRQQQQ+T + ++ + QR++ E++Q QMMSFLA+AM SP L Q ++Q+++
Sbjct: 144 MMEIVSLRQQQQTTKSYIKAMEQRIEGTERKQRQMMSFLARAMQSPSFLHQLLKQRDK 201
>AT3G22830.1 | Symbols: AT-HSFA6B, HSFA6B | heat shock transcription
factor A6B | chr3:8078981-8080895 FORWARD LENGTH=406
Length = 406
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 1 MQELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFVQQQNESN 60
M ELVRLRQQQQST L + ++++ E +Q QMMSFLA+AM +P + Q V+Q+ +
Sbjct: 198 MMELVRLRQQQQSTKMYLTLIEEKLKKTESKQKQMMSFLARAMQNPDFIQQLVEQKEKRK 257
Query: 61 RHISGVKKRR 70
+ K+R
Sbjct: 258 EIEEAISKKR 267
>AT2G26150.1 | Symbols: ATHSFA2, HSFA2 | heat shock transcription
factor A2 | chr2:11135856-11137217 FORWARD LENGTH=345
Length = 345
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 3 ELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFVQQQNESNRH 62
E+VRLRQQQ S+ +Q+ + QR+ V E+RQ QMM+FLAKA+++P + QF E +
Sbjct: 176 EVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNPNFVQQFAVMSKEK-KS 234
Query: 63 ISGV---KKRRL 71
+ G+ +KRRL
Sbjct: 235 LFGLDVGRKRRL 246
>AT2G26150.2 | Symbols: ATHSFA2, HSFA2 | heat shock transcription
factor A2 | chr2:11136052-11137217 FORWARD LENGTH=290
Length = 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 3 ELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFVQQQNESNRH 62
E+VRLRQQQ S+ +Q+ + QR+ V E+RQ QMM+FLAKA+++P + QF E +
Sbjct: 121 EVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNPNFVQQFAVMSKE-KKS 179
Query: 63 ISGV---KKRRL 71
+ G+ +KRRL
Sbjct: 180 LFGLDVGRKRRL 191
>AT1G67970.1 | Symbols: AT-HSFA8, HSFA8 | heat shock transcription
factor A8 | chr1:25484844-25486313 REVERSE LENGTH=374
Length = 374
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 2 QELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFVQQQNESNR 61
QEL+++RQ Q+ TD ++ + RVQ ME+ Q +M+SFL M +P +L Q +Q + ++
Sbjct: 151 QELIKVRQYQEVTDTKMLHLEDRVQGMEESQQEMLSFLVMVMKNPSLLVQLLQPKEKNTW 210
Query: 62 HISG 65
+G
Sbjct: 211 RKAG 214
>AT5G03720.1 | Symbols: AT-HSFA3, HSFA3 | heat shock transcription
factor A3 | chr5:971913-973683 REVERSE LENGTH=412
Length = 412
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 1 MQELVRLRQQQQSTDNQLQGVGQRVQVMEQRQHQMMSFLAKAMHSPGILAQFVQQQNESN 60
M+E+V L+QQ + T + V QR++ EQRQ Q++SFLAK + G L + + +
Sbjct: 183 MEEMVELQQQSRGTARHVDTVNQRLKAAEQRQKQLLSFLAKLFQNRGFLERLKNFKGKEK 242
Query: 61 RHISGVKKRR 70
G++K R
Sbjct: 243 GGALGLEKAR 252