Miyakogusa Predicted Gene

Lj3g3v3614670.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3614670.1 Non Chatacterized Hit- tr|K4AK08|K4AK08_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,45,0.000000000000006,seg,NULL; coiled-coil,NULL,CUFF.46031.1
         (498 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G51405.1 | Symbols:  | myosin-related | chr1:19057780-1905958...   260   2e-69

>AT1G51405.1 | Symbols:  | myosin-related | chr1:19057780-19059582
           FORWARD LENGTH=487
          Length = 487

 Score =  260 bits (664), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 168/389 (43%), Positives = 243/389 (62%), Gaps = 41/389 (10%)

Query: 91  MLRAECNLLRMEKEIAVKKLERTRAKMERILRSAVRTLVSGRIKICEGKNINMVLDEEIH 150
           MLR+ECNLLR+EKEIA+KK+ER + +MER LRSAV TL+SG+ +I EG   + VL++EI 
Sbjct: 129 MLRSECNLLRIEKEIALKKMERRKKRMERTLRSAVLTLLSGKERISEGTKESKVLEDEIS 188

Query: 151 ALTEKLQKLQKRSLVKDFETRNSR-NFDKQVSVLQRRLERIG-GPSDEIYLREFEELANV 208
            L EKL +L K   VKD E RN + NFDKQ SVL+R LER     S+E+ ++  +++A  
Sbjct: 189 YLVEKLNEL-KSPKVKDMEARNFKHNFDKQASVLRRELERFDEAVSEEVCVKGIQKMAEA 247

Query: 209 SLSIKTSSRFDDSIVASGKLNVEILRRKMEGLSKGILLQRMEEEYXXXXXXXXXXXXXXX 268
           S S+ +    D + + +   N++ L  KME LSKG+LL+RME+EY               
Sbjct: 248 SFSVHS----DQNALRNNNGNIDTLSSKMEALSKGVLLERMEKEYGSSLVAPSSSS---- 299

Query: 269 XXXKRVEFQDSSSSIRVPHQEKLSYEGNPCSGHCKSVVRRIVEQVRTETEQWSQMQEMLG 328
                   QD        H+EK       CS HCK V+R+I ++VR E EQWSQMQEML 
Sbjct: 300 -------VQDMYCKGIKAHEEK-----KDCSRHCKVVMRKIADEVRAEAEQWSQMQEMLN 347

Query: 329 QVREEMEELQASRDFWEDRALHSDFQIQSLHNSLQEWRQRALSFESEKNELRAKLSMLSG 388
           QVR+EMEELQ+ RDFW++RAL +D +IQ+LH+S++ WR++ALS E++   L+A++  L  
Sbjct: 348 QVRKEMEELQSCRDFWQNRALEADSEIQNLHSSVEGWRRKALSSEAKLKNLQAEVCGLQE 407

Query: 389 DLERLRKEQNSVQGSKCSSIPLDTQNEFEKRVVVCCSKENNSIVTENSKHNEGMRNGE-R 447
           +++RLRKE + ++  K + +P    +E EKRV++C  KEN        +H+    NG+  
Sbjct: 408 EIKRLRKE-DKLEPEK-NKLP----SESEKRVLICRLKEN--------RHSN---NGDWS 450

Query: 448 KAHAGRGGFQAPKRSPFQDIGNSSLLMKQ 476
           K   GR    +  R P +++ NSS++ +Q
Sbjct: 451 KYSEGRTTKPSSSRPPLREVKNSSVIARQ 479