Miyakogusa Predicted Gene

Lj3g3v3599420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3599420.1 Non Chatacterized Hit- tr|D8S652|D8S652_SELML
Putative uncharacterized protein OS=Selaginella
moelle,40.88,9e-19,seg,NULL,CUFF.46118.1
         (154 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G43250.1 | Symbols:  | unknown protein; Has 32 Blast hits to ...   179   9e-46

>AT2G43250.1 | Symbols:  | unknown protein; Has 32 Blast hits to 32
           proteins in 11 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr2:17977619-17979496 FORWARD LENGTH=625
          Length = 625

 Score =  179 bits (453), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 91/155 (58%), Positives = 112/155 (72%), Gaps = 4/155 (2%)

Query: 2   QRAMAFAFG----PSKVVAPGFATSGIKTSGVLKTAVSTEKIRAVTHSVIASAEKTSISA 57
            +A+ FAF     PSK +APGFA+SG K++ ++K ++S EKIRAVTHS+IAS EKTS+SA
Sbjct: 470 HKAVTFAFTKVAVPSKAMAPGFASSGAKSTSLVKASLSAEKIRAVTHSIIASVEKTSLSA 529

Query: 58  MRTTFYEIMRKRKVRPIGFLPWATFAGSVXXXXXXXXXXDGIECAIESLPAAPSIASLGR 117
           MRT FYEIMRKR+ +PIG LP  TF  S+          DGIECA  SLP+APSIA+LGR
Sbjct: 530 MRTAFYEIMRKRRAKPIGTLPLVTFGASLATCAGLFAYGDGIECAAMSLPSAPSIANLGR 589

Query: 118 GIQHLREASQAVMKTEGTRIQGSIESLVNRIKKAR 152
           GIQ+L EAS  V   EG RIQ +IESL  R+KK +
Sbjct: 590 GIQNLHEASLEVRMREGNRIQNAIESLRQRLKKVK 624