Miyakogusa Predicted Gene

Lj3g3v3541710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3541710.1 Non Chatacterized Hit- tr|I3SDS4|I3SDS4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,97.06,0,ERLUMENR,ER lumen protein retaining receptor; ER LUMEN
PROTEIN RETAINING RECEPTOR,NULL; ER LUMEN PRO,CUFF.45982.1
         (272 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G21190.1 | Symbols:  | ER lumen protein retaining receptor fa...   491   e-139
AT4G38790.1 | Symbols:  | ER lumen protein retaining receptor fa...   489   e-139
AT1G75760.1 | Symbols:  | ER lumen protein retaining receptor fa...   483   e-137
AT1G19970.1 | Symbols:  | ER lumen protein retaining receptor fa...   468   e-132
AT3G25160.1 | Symbols:  | ER lumen protein retaining receptor fa...   347   6e-96
AT3G25040.1 | Symbols: ERD2B | endoplasmic reticulum retention d...   109   2e-24
AT1G29330.1 | Symbols: ATERD2, AERD2, ERD2 | ER lumen protein re...   105   2e-23

>AT2G21190.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr2:9080916-9082642 FORWARD LENGTH=269
          Length = 269

 Score =  491 bits (1264), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 235/268 (87%), Positives = 250/268 (93%)

Query: 5   RMSIHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLI 64
           +  IH V+TWVRRQPPKVKAFLAVVSGMAALVLL+ IVHDHDNLFVAAEAVHS+GISVLI
Sbjct: 2   KTPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLKLIVHDHDNLFVAAEAVHSIGISVLI 61

Query: 65  YKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIYMIRFK 124
           YKLMKEKTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHT+LD AT  TT+WVIYMIRF 
Sbjct: 62  YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYMIRFN 121

Query: 125 LKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQLRVM 184
           LK +YMEEKDNFA+YYV+ PC VLA+ IHPSTSH+ILNRI W FCVYLEAVSVLPQLRVM
Sbjct: 122 LKTTYMEEKDNFALYYVLAPCVVLAVWIHPSTSHNILNRISWGFCVYLEAVSVLPQLRVM 181

Query: 185 QNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISEIVQT 244
           QNTKIVEPFTAHYVFALGVARF SCAHWVLQ++DT G LLV LGYGLWPSMV+ISEIVQT
Sbjct: 182 QNTKIVEPFTAHYVFALGVARFFSCAHWVLQMMDTHGRLLVVLGYGLWPSMVIISEIVQT 241

Query: 245 FILADFCYYYVKSVFGGQLVLRLPSGVV 272
           FILADFCYYYVKSVFGGQLVLRLPSGVV
Sbjct: 242 FILADFCYYYVKSVFGGQLVLRLPSGVV 269


>AT4G38790.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr4:18111426-18112977 FORWARD
           LENGTH=273
          Length = 273

 Score =  489 bits (1260), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 235/268 (87%), Positives = 251/268 (93%)

Query: 5   RMSIHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLI 64
           +  IH V +WVRRQPPKVKAFLAVV+GMAALVLLRFIVHDHDNLFVAAEAVHS+GI VLI
Sbjct: 6   KTPIHVVWSWVRRQPPKVKAFLAVVTGMAALVLLRFIVHDHDNLFVAAEAVHSIGICVLI 65

Query: 65  YKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIYMIRFK 124
           YKLMKEKTCAGLSLKSQELTA+FLAVRLYCS VMEYDIHT+LD AT  TT+WVI+MIRFK
Sbjct: 66  YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSIVMEYDIHTILDLATLGTTLWVIFMIRFK 125

Query: 125 LKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQLRVM 184
           L+ASYME+KDNF +YYV+ PC  LA+ IHPSTSH+I+NRI WA CVYLEAVSVLPQLRVM
Sbjct: 126 LRASYMEDKDNFPLYYVLAPCVALAVFIHPSTSHNIINRISWALCVYLEAVSVLPQLRVM 185

Query: 185 QNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISEIVQT 244
           QNTKIVEPFTAHYVFALGVARFLSCAHWVLQV+DTRG LLVALGYGLWPSMVLISEIVQT
Sbjct: 186 QNTKIVEPFTAHYVFALGVARFLSCAHWVLQVVDTRGRLLVALGYGLWPSMVLISEIVQT 245

Query: 245 FILADFCYYYVKSVFGGQLVLRLPSGVV 272
           FILADFCYYYVKSVFGGQLVLRLPSGVV
Sbjct: 246 FILADFCYYYVKSVFGGQLVLRLPSGVV 273


>AT1G75760.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr1:28446940-28448421 REVERSE
           LENGTH=272
          Length = 272

 Score =  483 bits (1243), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 233/272 (85%), Positives = 248/272 (91%)

Query: 1   MRPQRMSIHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60
           M+     IH V TWVRRQPPKVK FL VVS M ALVLLR IVHDHDNLFVAAEAVHSLGI
Sbjct: 1   MKAATRPIHAVTTWVRRQPPKVKGFLGVVSAMTALVLLRVIVHDHDNLFVAAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIYM 120
           SVLIYKL KE+TCAGLSLKSQELTA+FLAVRLYCSFVME+DIHTLLD AT  TT++VIYM
Sbjct: 61  SVLIYKLTKERTCAGLSLKSQELTALFLAVRLYCSFVMEFDIHTLLDSATLVTTLFVIYM 120

Query: 121 IRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQ 180
           IRFKLKASYM++KDNFAIYYVVIPC VL++LIHPST HHI+N+I WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKASYMDDKDNFAIYYVVIPCVVLSVLIHPSTHHHIINKISWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALG+ARFLSCAHWVLQVLDTRG LL ALGYG WP MVL+SE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVLDTRGRLLTALGYGFWPIMVLLSE 240

Query: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
           IVQTFILADFCYYYVKS+ GGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVKSLMGGQLVLRLPSGVV 272


>AT1G19970.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr1:6931194-6932597 REVERSE LENGTH=272
          Length = 272

 Score =  468 bits (1203), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 218/272 (80%), Positives = 246/272 (90%)

Query: 1   MRPQRMSIHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60
           M+ ++  I +V  W+RRQPPKVKAFL VV+ M  LVLLR IVH+HDNLFVA+EAVH++GI
Sbjct: 1   MKAEKNPIQSVMAWIRRQPPKVKAFLGVVTAMTVLVLLRVIVHEHDNLFVASEAVHAVGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIYM 120
           +VLIYKL KEKTCAG+SLK+QELTA+FLAVRLYCSFVME+D+HT LD AT  TT+WV+YM
Sbjct: 61  AVLIYKLTKEKTCAGISLKTQELTALFLAVRLYCSFVMEFDLHTFLDSATLVTTLWVVYM 120

Query: 121 IRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQ 180
           IRFKL+ +YME+KDNFAIY+VVIPCAVL+  IHPST HHI+NRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLRPTYMEDKDNFAIYFVVIPCAVLSFFIHPSTRHHIINRISWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISE 240
           LRVMQNTKIVEPFTAHYVFALG+ARFLSCAHW+LQVLDTRG LL ALG GLWP MVLISE
Sbjct: 181 LRVMQNTKIVEPFTAHYVFALGIARFLSCAHWILQVLDTRGRLLTALGSGLWPVMVLISE 240

Query: 241 IVQTFILADFCYYYVKSVFGGQLVLRLPSGVV 272
           IVQTFILADFCYYYV+S+ GGQLVLRLPSGVV
Sbjct: 241 IVQTFILADFCYYYVQSLMGGQLVLRLPSGVV 272


>AT3G25160.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr3:9160337-9162023 REVERSE LENGTH=272
          Length = 272

 Score =  347 bits (889), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 163/263 (61%), Positives = 214/263 (81%), Gaps = 1/263 (0%)

Query: 7   SIHTVATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYK 66
           +++ V  W+R+Q  KVK  L ++  +  +VLL+F V +H++ F+A+E +H+ GI +LIYK
Sbjct: 9   AVNVVFGWLRQQSNKVKIALGIIISLILVVLLKFTVRNHNHFFIASELIHAAGILILIYK 68

Query: 67  LMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDFATFATTVWVIYMIRFKLK 126
           L ++KTC+GLSLKSQE+TA+FLAVRL CS  ME DIHT+LDFAT  +T+WVIYMIR+KLK
Sbjct: 69  LTRQKTCSGLSLKSQEVTAIFLAVRLICSINMEGDIHTVLDFATLVSTLWVIYMIRYKLK 128

Query: 127 ASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQLRVMQN 186
           ASY++  D    YYV++P A+LAL+I+PSTS+   +RI WAFCVY E+VSVLPQLR+MQN
Sbjct: 129 ASYIKSLDTCYNYYVLVPSAILALIINPSTSYSYFHRILWAFCVYTESVSVLPQLRLMQN 188

Query: 187 TKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYG-LWPSMVLISEIVQTF 245
            +I+EPFTAHYVFALG+ARFL+CAHW++QV++TRGH L  LG G  W  + L++EIVQTF
Sbjct: 189 AQIIEPFTAHYVFALGIARFLACAHWIIQVVETRGHYLWLLGAGYFWFPVALLAEIVQTF 248

Query: 246 ILADFCYYYVKSVFGGQLVLRLP 268
           ILADFCYYYVKSV  GQLVL++P
Sbjct: 249 ILADFCYYYVKSVMEGQLVLKMP 271


>AT3G25040.1 | Symbols: ERD2B | endoplasmic reticulum retention
           defective 2B | chr3:9124479-9126051 FORWARD LENGTH=215
          Length = 215

 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 19/228 (8%)

Query: 47  NLF-VAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAMFLAVR---LYCSFVMEYDI 102
           N+F +A +  H   + VL+ K+   K+CAG+SLK+QEL A+  A R   ++ SFV  Y+ 
Sbjct: 2   NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFATRYLDIFTSFVSLYNT 61

Query: 103 HTLLDFATFATTVWVIYMIRFK-LKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHIL 161
              L F   + ++ V YM   K +  +Y  E+D F  +++V+PC +LALLIH   +    
Sbjct: 62  SMKLVFLGSSFSI-VWYMKYHKAVHRTYDREQDTFRHWFLVLPCFLLALLIHEKFT---F 117

Query: 162 NRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRG 221
             + W   +YLEAV++LPQL ++Q T+ ++  T  Y+F LG  R L   +W+ +   T  
Sbjct: 118 LEVLWTSSLYLEAVAILPQLVLLQRTRNIDNLTGQYIFLLGGYRGLYILNWIYRYF-TEP 176

Query: 222 HLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPS 269
           H +  + +        I+  VQT + ADF YYY  S +     L+LP+
Sbjct: 177 HFVHWITW--------IAGFVQTLLYADFFYYYFLS-WKNNKKLQLPA 215


>AT1G29330.1 | Symbols: ATERD2, AERD2, ERD2 | ER lumen protein
           retaining receptor family protein |
           chr1:10258580-10260906 REVERSE LENGTH=215
          Length = 215

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 127/229 (55%), Gaps = 21/229 (9%)

Query: 47  NLF-VAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAMFLAVR---LYCSFVMEYDI 102
           N+F  A +  H + + +L+ K+   K+CAG+SLK+QEL A+    R   L+  +V  Y+ 
Sbjct: 2   NIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN- 60

Query: 103 HTLLDFATFATTVWVIYMIRFK--LKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHI 160
            +++     A+++ +++ +R    ++ SY ++ D F   YVV+ C VL L+++   +   
Sbjct: 61  -SIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFT--- 116

Query: 161 LNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTR 220
           +  +FWAF +YLEAV++LPQL ++Q +  V+  T  YV  LG  R L   +W+ +   T 
Sbjct: 117 VQEVFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVVFLGAYRGLYIINWIYRYF-TE 175

Query: 221 GHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPS 269
            H      +  W + V  S +VQT + ADF YYY  S +     L+LP+
Sbjct: 176 DH------FTRWIACV--SGLVQTALYADFFYYYYIS-WKTNTKLKLPA 215