Miyakogusa Predicted Gene

Lj3g3v3541690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3541690.1 Non Chatacterized Hit- tr|I1KRW3|I1KRW3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50607
PE,67.85,0,seg,NULL; Urb2,Nucleolar 27S pre-rRNA processing,
Urb2/Npa2, C-terminal,CUFF.45977.1
         (2051 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30150.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Nucleolar ...   625   e-179

>AT4G30150.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Nucleolar 27S
            pre-rRNA processing, Urb2/Npa2 (InterPro:IPR018849); Has
            58 Blast hits to 49 proteins in 21 species: Archae - 0;
            Bacteria - 2; Metazoa - 2; Fungi - 0; Plants - 44;
            Viruses - 3; Other Eukaryotes - 7 (source: NCBI BLink). |
            chr4:14742452-14749764 FORWARD LENGTH=2009
          Length = 2009

 Score =  625 bits (1613), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 466/1441 (32%), Positives = 698/1441 (48%), Gaps = 128/1441 (8%)

Query: 47   HSPWNNLELILCIKDKDIDLHRKVNQAFNFVHSIVDGGADDAGQHCETIKLPRLLYYLND 106
              PW NLELIL ++   +   +KV  AF+FV         +  + C+ +K+ RL+ +L+D
Sbjct: 92   EGPWKNLELILSLQSNTLGFKKKVELAFSFVKGYGGENGTNEDEECQAVKISRLIIFLSD 151

Query: 107  WILTVLFPPNGKENWGNGKTPQVEGIEAYMDLRCWKIFKFCLQESLKFSVSLNMSRNLLQ 166
            WI ++L P        N K       E  +D RCW+IF FCL+E+    VSLN+SRNLL+
Sbjct: 152  WIQSLLIPSEK-----NIKVKCDLDSEPCLDFRCWEIFSFCLKEATILGVSLNLSRNLLK 206

Query: 167  TIQFIARNALSLLEDS-----SICSGELHVSDERSKLYDTVLDCVSSVFSSHGGLSNENL 221
             I  I    LS L +S       C+G+  V      +Y +V+DC+  +FSS  G+SN+NL
Sbjct: 207  AIGLITGRFLSALNESLATGVDFCNGQGFV------VYSSVVDCLGLLFSSKSGMSNDNL 260

Query: 222  DLWVETAKVALELVLKMYSKNLDDSVVGTFALPFFWSVLQPFSKFLMVHPARK-GFHNFV 280
            DLW  T +  L+L   +  +N+ DS+     L F   VL+PFS+FLM HP  K GF +F+
Sbjct: 261  DLWFSTVEPVLKLTHTVLVENIKDSLGDRHVLKFSCLVLEPFSRFLMTHPTTKNGFCDFL 320

Query: 281  DKXXXXXXXXXXXXXXRVNGSDPIWMGRLTKVVEEVLSHGLFHPVQIDEFLSLHGSEKYV 340
            DK                + +  + +  L +++E++LS  LFH   ID FL L G++KY+
Sbjct: 321  DKLFEPFMDVLGLLNLIEDKNKDLEIS-LLRLIEDILSLALFHSAHIDGFLGLGGAKKYL 379

Query: 341  ASGDDKSKDSKGTIKSYHRHLFDVLNKIIVRKNATAMGSLGLIFRLYVNSA-RKFKGTSV 399
                 +SK++K  +KSYHRH F     +++ K    +  +G +F++++    ++ +  + 
Sbjct: 380  P----ESKENKTILKSYHRHFFTKFKNMLLMKKELELSCMGSLFKVFIYRVMKQQRDPNQ 435

Query: 400  LYEG--SKTVENTDAVRQPVPGENHSSNN------------IFADTQKSLFNFFVLIMEP 445
            L EG  +K      A  +P    + ++N+            +  +T+KS+F+FF+ +MEP
Sbjct: 436  LQEGMMTKASNARQAEERPWKLADTATNDNGSSTKSHYSSSLRLETRKSIFDFFLHLMEP 495

Query: 446  LLIEINASLQAKMDAEXXXXXXXXXXKSISNLLTSFMQEKVYVKTEDTSGGSYLNFLKKI 505
            +L+EIN   Q+  +            KS ++LL +F  E++YVKTED S G+   FL+ I
Sbjct: 496  ILLEINGYNQSGSEMAPLLGDFCCVIKSANSLLFNFAHERMYVKTEDASEGACSCFLRTI 555

Query: 506  FNTLITSSTSV-LFLPNKDTTHMEKERYILSANEILVGIGHLLEIEYEVIGEDLVNLWVI 564
            F T+++ ++ +    P  + + M    ++L A E++  IG+LL IEYE+I  DLV LW+I
Sbjct: 556  FKTIVSVASELKKHCPYDNGSEM----HVLLAKELVTAIGYLLHIEYEIIESDLVTLWLI 611

Query: 565  MLSYSAINC-NLMKDFGQCSLASTVPALGCQIINLYSQLRQVKIAILALCKAIRLII--- 620
            +LS+   +  +     G C L S +  LGCQ+I LYS LRQV +A+ +L KA+RL++   
Sbjct: 612  ILSFLEFSSLSPENSEGDCPLTSLLVGLGCQLITLYSDLRQVSVAVFSLFKAVRLVMPVV 671

Query: 621  -SHEGNAEEISSRSLKFLSN------EVYSESVERLLSSHKFIHAIYKAIESIPEGQVSG 673
               +G+ +E+ +     LS       E   +SVE+LLSS     AI+KAI+ IPEGQ SG
Sbjct: 672  TPADGDDDEMIATEELPLSTVFPFRLERSEKSVEKLLSSQALRLAIHKAIKVIPEGQASG 731

Query: 674  CIRQLSDDISESLQWMKDCSPSVDGKLQNFNLHAELLGRGLSRLYCLVLDSVTITEGNSN 733
            CI+ L+ D+S++++W+K    S     Q+  + A L G  LS +Y L+LDS+TIT GNSN
Sbjct: 732  CIKSLTADVSKTMKWIKQVCCSTGATEQDGQVAAFLAG-SLSDIYSLILDSITITTGNSN 790

Query: 734  LLGVALKESMALLRPYLSILVGQQSDTICKFLXXXXXXXXXXXXXXXXXXXFGRSSQWXX 793
            L+G ++K+ + L+ P L+ LV   SD I  FL                   + +S +   
Sbjct: 791  LVGQSMKDLLDLISPCLTHLVSSDSDCIENFLSALTGKDLEIVMAEKKIETYRKSVRLFV 850

Query: 794  XXXXXXXXSCRSLLRQAISLMPPSLSKKMSAAVGDYTAYSAYELMEKIDEIDID-FFSWI 852
                    S RSL RQ ISLMPP  +K M+   GD  A        K    + + +FSWI
Sbjct: 851  IFVLRIYMSSRSLYRQVISLMPPKKTKDMAGIKGDSVAVRCGSDWIKEKSWNYEGYFSWI 910

Query: 853  VQPSSSLLAVMQFISDIYLKYSPDDSFPLIYIFQSMALQRLVDLNKQIMLFKYLQKKS-- 910
             QPS+S++  ++ IS  YLK    D   LIYI   +ALQRLVDLN  I    Y+ + S  
Sbjct: 911  SQPSASIVDTIKHISAFYLKDDSADCSLLIYILYGVALQRLVDLNSHIKSLDYVSQISDN 970

Query: 911  -----YRSRIKALKEEAAGLTNFIMENLSCIYQSPVFVSDDVTCEDVVSLAPQSNGWNQG 965
                     +  LK E   LT+F++ N   I    V   DD T E +      ++ W   
Sbjct: 971  QINDTMLKHVSVLKREGEELTDFLLGN--NIISGFV---DDGTFETI----KDTDQWVLR 1021

Query: 966  VYAANKNSLPIAIWSNLCKNVDTWGNHGSKKHLKKFISHLLRTSLQCLTSSFPEPEM--- 1022
            V   N   LP      L +++D W  H  KK LK F+S L+ +S+ C+ +      +   
Sbjct: 1022 VSGINGKCLPTMRLWVLSQHIDLWCPHAGKKKLKNFLSQLIGSSVPCILNGVGMSTLGWE 1081

Query: 1023 RVIDECKLLKRVTLPQIXXXXXXXXXXYEQKFAHRNLPAIFCGVLEKYVLPLFSSITSES 1082
              +D+    K++ L Q           YE +F  R L   F  VL+      F  IT E 
Sbjct: 1082 NNVDKGSQKKKIGLEQFSFGLLFDSVLYEHEFVRRYLAPSFSHVLKMTAETFFKDIT-EE 1140

Query: 1083 ANLQSSPNWAEFSSALDISTLVDENKKVQVDCSGVEKSIAPSCDKLPSDTGSRVKTFPMA 1142
             N  S  +W+E    L                   E SIA    KL S+         + 
Sbjct: 1141 VNFDSPSDWSEVLILL-------------------ESSIANLSGKLKSEAFLEAHVSLLD 1181

Query: 1143 VKSFTDCNHLLNLLCLMPD--INARSFSQVVTCIFNLERLLVSALLYVRSTVYQDYYCEY 1200
             + FT C +LLNLL +MP    N +SF    + + +LER +V ++L   + +        
Sbjct: 1182 NRKFTACQNLLNLLGVMPKEYTNKKSFQLYASYVLDLERFIVFSMLRCLNKLSCGDMQNL 1241

Query: 1201 LRLFVSCRKALRYIFMGFCEKADTXXXXXXXXXXXXXFPALWLSKSLSVIVGIQETMSAE 1260
              LF +CRK L+ I M  C+K                  A WL KS       Q     +
Sbjct: 1242 FSLFSTCRKTLKSIAMISCDKV---LGATKLPLSDSSLLASWLFKSAQAAT-CQVRFRND 1297

Query: 1261 NIALFESLMFSLMDHTSYALLGLGKYQIIHVFSTNKEAEMTCE--EICNQKNSHAENHLS 1318
                    +FSLMDHTSY  L + KYQ       + E  ++ E  E   Q N   EN L+
Sbjct: 1298 VTGKARDALFSLMDHTSYMFLTVSKYQFSKALPFSDEKLISSEISEGTGQANLIIEN-LT 1356

Query: 1319 SPSQYLDSPKLEALKCLTFVAENLKGQIQSLLVSQKDIPCCVNMGFGLTYESINRLSSAV 1378
              ++ L    L AL+  TF  E    + +SL+                    +N+L+   
Sbjct: 1357 EQAETL----LNALRA-TFRDEKTAFKCESLI--------------------LNKLTPIF 1391

Query: 1379 SCFSGVLWGLTSVMDQTDTTDSDHKEGLMWKSENASELYRCIFSLIEVIDFFVSKLLIEN 1438
            SCFSG+LWGL S +   D   +     L WKSE  S+L R I  L    + F   L +  
Sbjct: 1392 SCFSGLLWGLASAVSNRDMQKNHQNAKLRWKSEQFSKLSRIIHVLSNFFEVFAQCLFLSG 1451

Query: 1439 N 1439
            +
Sbjct: 1452 D 1452



 Score =  523 bits (1346), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/534 (50%), Positives = 351/534 (65%), Gaps = 7/534 (1%)

Query: 1521 DSSETQRLNKPLLQSLVKGDHPEAAFFLRQLLIASSSLLRLNLHKDDSSMRSSSVRTFIE 1580
            D  ET  + K +++SL+KGD  E    L+ LLIAS+++LRLNL  D  +   + V     
Sbjct: 1480 DVVETSDVKKKIIESLIKGDSSEVVLALKHLLIASAAILRLNLQIDGITFSPTFVSVLTN 1539

Query: 1581 ISRVLLLEFTEMAVAPKQSAFLLLDGALSYMRELARYFPLTDPTLSMKVYTELIEIHMKA 1640
            IS  LL  F +M+ AP + +F+ LDGA+  + EL   F L++PTL++ +Y++LIE+H+K 
Sbjct: 1540 ISNDLLSVFADMSEAPLEFSFIWLDGAVKVVEELGSQFCLSNPTLNIDLYSKLIELHLKV 1599

Query: 1641 IGKTILLQGKRATLTFHERQSSTKTLH-KGSFEADSSEFFCFCLDEFKTRLRMSLKAFIE 1699
            IGK I LQGK ATL  HE    T  +H K              LDE K RLRMS K FI 
Sbjct: 1600 IGKCISLQGKEATLESHETGFGTNAIHAKLVLTEKKRSHRLHWLDELKQRLRMSFKVFIH 1659

Query: 1700 RQSELHLLSTIQAIERALVGVQEGCTMIYDVNT-SKNGGEISSLVAAGIDCFDMILEFVS 1758
              SELHLLS +QAIERALVGV E C  IY + T +++GG IS  VAAG+DC D+ILE  +
Sbjct: 1660 SSSELHLLSGVQAIERALVGVWEVCPAIYCIQTGNRDGGRISETVAAGLDCLDLILEHAT 1719

Query: 1759 GRKSLKLIKRHCQSLVAAVFNIIVHLQSPLIFNVKLTSGTVGS-TPDPGSAILMCVEVLV 1817
            GRK L ++KRH Q L++AVF I+ H+QSP IF      G  GS +PD G+ ILMCV VL+
Sbjct: 1720 GRKRLNVVKRHIQGLMSAVFGIMAHMQSPFIFFSNAVVGNQGSNSPDSGAVILMCVGVLI 1779

Query: 1818 TVSRKLALFSTDVWHVGHLLHIPAVLFQNFHQLRNSKASAPSDSFMISEEQISHPAERVN 1877
             ++ K ALF  D  HV   +HIP  +F ++        S    + +  ++Q         
Sbjct: 1780 RIAGKHALFRMDSSHVSQSIHIPGAIFLDYLHATRVGFSVLDGNLLSKDDQQQDLLGCSK 1839

Query: 1878 SCHVDHQFSINLFVACCQLLWTVIRHRPSECKQCVAHLEASVAGLLNCLETVLDNQSMVN 1937
               VD +FS++L+ ACC+LL+T ++H  S+ +  +A L+ SV+ LL+CLET   N     
Sbjct: 1840 ELQVDRKFSVSLYAACCRLLYTAVKHHKSQTEGSIATLQESVSALLHCLETAGKNLG--- 1896

Query: 1938 KGCFSLQVEEGVKCACFLRRIYEEIKQQKDIFNRHCSLFLSNYIWVYSGYGPRRSGIRRE 1997
              C S +VEEG++CACFLRRIYEE++QQK++F +HC  FLS YIWV SGYGP ++G+ RE
Sbjct: 1897 -NCVSWEVEEGIRCACFLRRIYEELRQQKEVFGQHCFKFLSTYIWVSSGYGPLKTGLERE 1955

Query: 1998 VDEALRPGVYALIDACSVDDLQYLHTVFGEGPCRNTLASLQHDYKLNFKYEGKV 2051
            VDEALRPGVYALID+CS +DLQYLHTVFGEGPCRN+LA+LQ DYKLNFKY GKV
Sbjct: 1956 VDEALRPGVYALIDSCSPNDLQYLHTVFGEGPCRNSLATLQQDYKLNFKYGGKV 2009