Miyakogusa Predicted Gene

Lj3g3v3527570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527570.1 tr|Q9SD22|Q9SD22_ARATH AT3g51250/F24M12_290
OS=Arabidopsis thaliana GN=F24M12.290 PE=2
SV=1,69.44,4e-19,Senescence,Senescence/spartin-associated; GB DEF:
PUTATIVE SENESCENCE-ASSOCIATED PROTEIN,NULL; FAMIL,CUFF.45958.1
         (72 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51250.1 | Symbols:  | Senescence/dehydration-associated prot...    74   2e-14
AT2G17840.1 | Symbols: ERD7 | Senescence/dehydration-associated ...    72   5e-14
AT4G35985.1 | Symbols:  | Senescence/dehydration-associated prot...    72   6e-14

>AT3G51250.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr3:19028227-19030442 FORWARD
           LENGTH=463
          Length = 463

 Score = 73.6 bits (179), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKPN 57
           H+YG +AA+ TNEGLDAAGHA GTAW  FK+RKA NPK VIKP+
Sbjct: 404 HRYGTKAAEATNEGLDAAGHAFGTAWVAFKIRKAFNPKNVIKPS 447


>AT2G17840.1 | Symbols: ERD7 | Senescence/dehydration-associated
           protein-related | chr2:7755923-7757798 REVERSE
           LENGTH=452
          Length = 452

 Score = 72.4 bits (176), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/44 (70%), Positives = 39/44 (88%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKPN 57
           HKYG +AA+ TNEGLDAAG+A+GTAW  FK+RKA+NPK V+KP+
Sbjct: 393 HKYGGKAAEATNEGLDAAGYALGTAWVAFKIRKAINPKSVLKPS 436


>AT4G35985.1 | Symbols:  | Senescence/dehydration-associated
           protein-related | chr4:17032268-17033862 REVERSE
           LENGTH=448
          Length = 448

 Score = 72.4 bits (176), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query: 14  HKYGEEAAQVTNEGLDAAGHAIGTAWTVFKLRKALNPKRVIKPN 57
           HKYG + AQ TNEGL AAGHA GTAWTVFK+R+ALNPK  +KP+
Sbjct: 383 HKYGAKTAQATNEGLSAAGHAFGTAWTVFKIRQALNPKSAMKPS 426