Miyakogusa Predicted Gene

Lj3g3v3527560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527560.1 tr|Q9ZR62|Q9ZR62_VICFA Amino acid transporter
OS=Vicia faba PE=2
SV=1,85.11,0.000000000000004,PROKAR_LIPOPROTEIN,NULL,CUFF.45957.1
         (47 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G09220.1 | Symbols: AAP2 | amino acid permease 2 | chr5:28668...    69   6e-13
AT5G63850.1 | Symbols: AAP4 | amino acid permease 4 | chr5:25551...    64   2e-11
AT1G44100.1 | Symbols: AAP5 | amino acid permease 5 | chr1:16764...    60   3e-10
AT1G58360.1 | Symbols: AAP1, NAT2 | amino acid permease 1 | chr1...    52   5e-08
AT1G77380.1 | Symbols: AAP3, ATAAP3 | amino acid permease 3 | ch...    51   2e-07
AT1G10010.1 | Symbols: AAP8, ATAAP8 | amino acid permease 8 | ch...    51   2e-07
AT5G49630.1 | Symbols: AAP6 | amino acid permease 6 | chr5:20142...    49   7e-07

>AT5G09220.1 | Symbols: AAP2 | amino acid permease 2 |
           chr5:2866867-2868863 FORWARD LENGTH=493
          Length = 493

 Score = 68.9 bits (167), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 41/47 (87%)

Query: 1   MYISQKKIGRWSNRWLGLQMLSVSCLIISMLAAIGSVAGVVLDLKTF 47
           MYI Q+K+ +WS RW+ LQMLSV+CL+IS++A +GS+AGV+LDLK +
Sbjct: 440 MYIKQRKVEKWSTRWVCLQMLSVACLVISVVAGVGSIAGVMLDLKVY 486


>AT5G63850.1 | Symbols: AAP4 | amino acid permease 4 |
           chr5:25551494-25553374 FORWARD LENGTH=466
          Length = 466

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 39/47 (82%)

Query: 1   MYISQKKIGRWSNRWLGLQMLSVSCLIISMLAAIGSVAGVVLDLKTF 47
           MYI Q+K+ RWS +W+ LQMLS  CL+I+++A +GS+AGV+LDLK +
Sbjct: 413 MYIRQRKVERWSMKWVCLQMLSCGCLMITLVAGVGSIAGVMLDLKVY 459


>AT1G44100.1 | Symbols: AAP5 | amino acid permease 5 |
           chr1:16764651-16767223 REVERSE LENGTH=480
          Length = 480

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 36/47 (76%)

Query: 1   MYISQKKIGRWSNRWLGLQMLSVSCLIISMLAAIGSVAGVVLDLKTF 47
           MYI+QK + RW  +W+ LQ+LSV+CL +S+ AA GSV G+V DLK +
Sbjct: 427 MYIAQKNVPRWGTKWVCLQVLSVTCLFVSVAAAAGSVIGIVSDLKVY 473


>AT1G58360.1 | Symbols: AAP1, NAT2 | amino acid permease 1 |
           chr1:21676623-21680313 FORWARD LENGTH=485
          Length = 485

 Score = 52.4 bits (124), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/47 (46%), Positives = 36/47 (76%)

Query: 1   MYISQKKIGRWSNRWLGLQMLSVSCLIISMLAAIGSVAGVVLDLKTF 47
           M+I+Q KI ++S RW+ L+ +   CLI+S+LAA GS+AG++  +KT+
Sbjct: 431 MHIAQTKIKKYSARWIALKTMCYVCLIVSLLAAAGSIAGLISSVKTY 477


>AT1G77380.1 | Symbols: AAP3, ATAAP3 | amino acid permease 3 |
           chr1:29075201-29077252 REVERSE LENGTH=476
          Length = 476

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 40/47 (85%)

Query: 1   MYISQKKIGRWSNRWLGLQMLSVSCLIISMLAAIGSVAGVVLDLKTF 47
           MYI+QKKI RWS RW+ LQ+ S+ CL++S+ AA GS+AGV+LDLK++
Sbjct: 423 MYIAQKKIPRWSTRWVCLQVFSLGCLVVSIAAAAGSIAGVLLDLKSY 469


>AT1G10010.1 | Symbols: AAP8, ATAAP8 | amino acid permease 8 |
           chr1:3265976-3268726 FORWARD LENGTH=475
          Length = 475

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 36/47 (76%)

Query: 1   MYISQKKIGRWSNRWLGLQMLSVSCLIISMLAAIGSVAGVVLDLKTF 47
           M+I+Q K+ ++S RWL L +L + CLI+S LAA+GS+ G++  +K++
Sbjct: 422 MHIAQAKVKKYSRRWLALNLLVLVCLIVSALAAVGSIIGLINSVKSY 468


>AT5G49630.1 | Symbols: AAP6 | amino acid permease 6 |
           chr5:20142681-20146441 REVERSE LENGTH=481
          Length = 481

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 35/47 (74%)

Query: 1   MYISQKKIGRWSNRWLGLQMLSVSCLIISMLAAIGSVAGVVLDLKTF 47
           M+I+QKKI ++S  W  L++LS +C I+S++AA GSV G++  LK F
Sbjct: 429 MHIAQKKIPKFSFTWTWLKILSWTCFIVSLVAAAGSVQGLIQSLKDF 475