Miyakogusa Predicted Gene
- Lj3g3v3527160.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3527160.1 Non Chatacterized Hit- tr|I1KVG3|I1KVG3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,26.85,2e-18,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.46380.1
(467 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 522 e-148
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 2e-87
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 4e-80
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 4e-76
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 277 1e-74
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 1e-73
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 1e-73
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 273 2e-73
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 272 4e-73
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 4e-71
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 9e-71
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 263 2e-70
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 2e-69
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 5e-68
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 253 2e-67
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 253 3e-67
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 3e-67
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 6e-67
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 251 9e-67
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 250 2e-66
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 2e-66
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 2e-66
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 5e-66
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 248 8e-66
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 247 1e-65
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 7e-65
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 8e-65
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 9e-65
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 1e-64
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 3e-64
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 7e-64
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 2e-63
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 239 2e-63
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 238 6e-63
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 238 6e-63
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 238 8e-63
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 8e-63
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 5e-62
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 1e-61
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 233 2e-61
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 233 2e-61
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 232 4e-61
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 4e-61
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 232 5e-61
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 9e-61
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 2e-60
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 229 2e-60
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 229 3e-60
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 8e-60
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 225 4e-59
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 6e-59
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 225 6e-59
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 223 2e-58
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 223 3e-58
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 4e-58
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 5e-58
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 221 8e-58
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 2e-57
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 2e-57
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 219 3e-57
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 6e-57
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 217 2e-56
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 2e-56
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 4e-56
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 4e-56
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 214 8e-56
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 213 2e-55
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 4e-55
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 1e-54
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 7e-54
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 9e-54
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 205 6e-53
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 9e-53
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 203 3e-52
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 1e-51
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 1e-51
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 1e-51
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 8e-51
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 5e-50
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 8e-50
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 194 1e-49
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 6e-48
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 5e-47
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 3e-46
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 182 5e-46
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 6e-44
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 7e-44
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 8e-44
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 173 2e-43
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 4e-35
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 9e-32
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 9e-28
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 110 2e-24
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 92 1e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 92 1e-18
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 90 3e-18
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 88 1e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 86 4e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 84 2e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 79 7e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 79 9e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 77 2e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 4e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 4e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 69 6e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 1e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 69 1e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 68 1e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 68 1e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 68 2e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 67 3e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 65 1e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 61 1e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 2e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 3e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 9e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 522 bits (1344), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/477 (54%), Positives = 339/477 (71%), Gaps = 13/477 (2%)
Query: 1 MIGGFAWNGFYEEALLLFLQMT--LSDSKPNGETFISLAYACAGL--SFPYLGRQLHAQL 56
MI GFAWN Y EAL+LFL+M + PNGET ISLAYAC GL F LG QLHAQ+
Sbjct: 268 MISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 327
Query: 57 IVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQL 116
I NGW+ D+DGRL +SLV MY+ GL+ A + L +FD QS N +IN Y++ G L
Sbjct: 328 ISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN---ESFDLQSCNIIINRYLKNGDL 384
Query: 117 EKAQELFDTVP-IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN 175
E+A+ LF+ V + +K++WT MI GYL AG V +A LF + D+D + WT MISG VQN
Sbjct: 385 ERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQN 444
Query: 176 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI--YEYDLI 233
EL AEA SL +M+ G PLN T++VL + G+ + LDQG+ +H + KT Y+ DLI
Sbjct: 445 ELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI 504
Query: 234 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 293
L+NSLVSMYAKCG I+D+Y IF+ M +D +SWNSMIMGLS HG A +AL +++ ML+ G
Sbjct: 505 LQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG 564
Query: 294 LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 353
P++VTFLGVL+AC+H+GL+ +G ELF +M +Y +QPG DHYIS+I+LLGRAGK+K+A
Sbjct: 565 KKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEA 624
Query: 354 EEFVLRLPVEPNHAIWGALVGVCGLSKTDAD---VASRATKRLLELDPLNAPGHVALCNI 410
EEF+ LP P+H ++GAL+G+CGL+ D D +A RA RLLELDP+NAPGHVALCN+
Sbjct: 625 EEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNV 684
Query: 411 YAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
YA RH +RKEM IKGV+K PGCSW++V GR +VF SGD+ ++L I
Sbjct: 685 YAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPI 741
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 163/385 (42%), Gaps = 75/385 (19%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
D S N+MI GY++ +E+A+ LF + +N + WT M+ GY G V +A LF MP
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMM--AHGFSPLNGTFAVLFGAMG--SVAYLD 214
+R+ ++WT+MISG+ NEL EA+ LF EM SP T L A G V +
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 215 QGRQLHGMQVKTIYE---YDLILENSLVSMYA---------------------------- 243
G QLH + +E +D L SLV MYA
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRY 378
Query: 244 -KCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRASEALTVYET------------- 288
K G+++ + +F + + DK+SW SMI G + G S A +++
Sbjct: 379 LKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMI 438
Query: 289 ------------------MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
M+ GL P T+ +L++ +D+G + + +
Sbjct: 439 SGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTAC 498
Query: 331 -QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD-ADVASR 388
P S++++ + G ++DA E ++ V+ + W ++ + GLS AD A
Sbjct: 499 YDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSM--IMGLSHHGLADKALN 555
Query: 389 ATKRLLELDPLNAPGHVALCNIYAA 413
K + LD P V + +A
Sbjct: 556 LFKEM--LDSGKKPNSVTFLGVLSA 578
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 154/336 (45%), Gaps = 45/336 (13%)
Query: 73 SLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI 132
SL+ Y+ G +D A E + + + N+M+ GYV+ ++ +A LF +P +N +
Sbjct: 82 SLLSKYAKTGYLDEARVLFE-VMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVV 139
Query: 133 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 192
+WT M++ G+ A +LFD MP+R+ ++W ++++G ++N + +A +F M +
Sbjct: 140 SWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRD 199
Query: 193 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 252
N G +++ + L G + E +++ S+V Y + G++ ++Y
Sbjct: 200 VVSWNAMIKGYIENDG----MEEAKLLFG----DMSEKNVVTWTSMVYGYCRYGDVREAY 251
Query: 253 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE--FGLYPDTVTFLGVLTACA- 309
R+F M R+ +SW +MI G + + EAL ++ M + + P+ T + + AC
Sbjct: 252 RLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGG 311
Query: 310 ------------HAGLVDKGWE-------LFNSMVNSYG-----------LQPGFDHYIS 339
HA ++ GWE L S+V+ Y L FD
Sbjct: 312 LGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSC 371
Query: 340 --IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
IIN + G ++ AE R+ + W +++
Sbjct: 372 NIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMI 407
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 19/216 (8%)
Query: 114 GQLEKAQELFDTVPIRNKIA----WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMI 169
G L A+ L D +P R I WT ++S Y G + +A LF+ MP+R+ + +M+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 170 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV-KTIY 228
+GYV+ + EA +LF EM + S + V+ A+ D GR +++ +
Sbjct: 116 TGYVKCRRMNEAWTLFREMPKNVVS-----WTVMLTAL-----CDDGRSEDAVELFDEMP 165
Query: 229 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 288
E +++ N+LV+ + G+++ + ++F M RD +SWN+MI G ++ EA ++
Sbjct: 166 ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGD 225
Query: 289 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
M E + VT+ ++ G V + + LF M
Sbjct: 226 MSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 276/466 (59%), Gaps = 10/466 (2%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLS-DSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
MI G+ GF+E+ LFL+M D K N T + AC G Q+H +V+
Sbjct: 245 MIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG--LVS 302
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
L+ +D L SL+ MYS G M A A+ G + N D S NS+I G VQ Q+ +A
Sbjct: 303 RMPLE-FDLFLGNSLMSMYSKLGYMGEA-KAVFGVMKNKDSVSWNSLITGLVQRKQISEA 360
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 179
ELF+ +P ++ ++WT MI G+ G++ K +LF MP++D+I WT+MIS +V N
Sbjct: 361 YELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYE 420
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
EA+ F +M+ P + TF+ + A S+A L +G Q+HG VK DL ++NSLV
Sbjct: 421 EALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLV 480
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
SMY KCG +D+Y+IFS ++ + +S+N+MI G S +G +AL ++ + G P+ V
Sbjct: 481 SMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGV 540
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
TFL +L+AC H G VD GW+ F SM +SY ++PG DHY +++LLGR+G + DA +
Sbjct: 541 TFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLIST 600
Query: 360 LPVEPNHAIWGALVGVCGLSKTD--ADVASRATKRLLELDPLNAPGHVALCNIYAANDRH 417
+P +P+ +WG+L+ SKT D+A A K+L+EL+P +A +V L +Y+ ++
Sbjct: 601 MPCKPHSGVWGSLLSA---SKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKN 657
Query: 418 IELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
+ + + K ++K PG SWI++KG VH F +GD + ++E+I
Sbjct: 658 RDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 5/227 (2%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
D + N +++GY++AG+ +A +F + ++ ++ + M+ GY G++ A LFD M
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGR 217
+R+ I WT+MI GY + + LF M G +N T AV+F A +G
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 277
Q+HG+ + E+DL L NSL+SMY+K G + ++ +F M +D +SWNS+I GL
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 278 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
+ SEA ++E M D V++ ++ + G + K ELF M
Sbjct: 356 QISEAYELFEKMPG----KDMVSWTDMIKGFSGKGEISKCVELFGMM 398
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
NS I+ + + G L++A+ +F + R+ ++W MIS Y G++ KA +FD MP R +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 164 AWTSMISGYVQNEL-IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
++ +MI+ ++N+ + +A LF ++ ++A + D+ L+
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAV----SYATMITGFVRAGRFDEAEFLYA- 168
Query: 223 QVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
+T ++ D + N L+S Y + G+ +++ R+F MA ++ +S +SM+ G GR +
Sbjct: 169 --ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
A ++++ M E + +T+ ++ AG + G+ LF M
Sbjct: 227 ARSLFDRMTE----RNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 105 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYL-SAGQVFKACDLFDSMPDRDSI 163
+MI+ Y + G++ KA ++FD +P+R ++ MI+ + + + KA +LF +P+++++
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAV 145
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
++ +MI+G+V+ EA L+ E F + +L G + + + + R GM
Sbjct: 146 SYATMITGFVRAGRFDEAEFLYAETPVK-FRDSVASNVLLSGYLRAGKWNEAVRVFQGMA 204
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
VK +++ +S+V Y K G I D+ +F M R+ I+W +MI G G +
Sbjct: 205 VK-----EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGF 259
Query: 284 TVYETMLEFG-LYPDTVTFLGVLTAC 308
++ M + G + ++ T + AC
Sbjct: 260 GLFLRMRQEGDVKVNSNTLAVMFKAC 285
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/366 (40%), Positives = 221/366 (60%), Gaps = 1/366 (0%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
++ S N+M+ GYVQ ++E A+ELFD +P RN W MI+GY G++ +A +LFD MP
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 218
RD ++W +MI+GY Q+ EA+ LF +M G +F+ V L+ G+Q
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 219 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 278
LHG VK YE + N+L+ MY KCG I+++ +F MA +D +SWN+MI G S HG
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 490
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
AL +E+M GL PD T + VL+AC+H GLVDKG + F +M YG+ P HY
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYA 550
Query: 339 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 398
+++LLGRAG ++DA + +P EP+ AIWG L+G + + ++A A ++ ++P
Sbjct: 551 CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV-HGNTELAETAADKIFAMEP 609
Query: 399 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 458
N+ +V L N+YA++ R ++ LR MR KGV+K PG SWI ++ + H FS GD P
Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHP 669
Query: 459 HVEDIL 464
++I
Sbjct: 670 EKDEIF 675
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 117/224 (52%), Gaps = 14/224 (6%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
S N MI+GY++ G+ E A++LFD +P R+ ++W MI GY+ + KA +LF+ MP+RD
Sbjct: 97 SYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD 156
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
+W +M+SGY QN + +A S+F M N + AY+ +
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLS---------AYVQNSKMEEA 207
Query: 222 -MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 280
M K+ + L+ N L+ + K +I ++ + F +M RD +SWN++I G + G+
Sbjct: 208 CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKID 267
Query: 281 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
EA +++ D T+ +++ +V++ ELF+ M
Sbjct: 268 EARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 18/276 (6%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
D + N I+ Y++ G+ +A +F +P + +++ MISGYL G+ A LFD MP
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 218
+RD ++W MI GYV+N + +A LF M N + +D R
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWN----TMLSGYAQNGCVDDARS 178
Query: 219 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 278
+ + E + + N+L+S Y + +++++ +F + +SWN ++ G +
Sbjct: 179 V----FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
EA +++M D V++ ++T A +G +D+ +LF + +Q F +
Sbjct: 235 IVEARQFFDSM----NVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVFT-WT 285
Query: 339 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
++++ + V++A E ++P E N W A++
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLA 320
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 117/304 (38%), Gaps = 78/304 (25%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G++ +G EAL LF+QM + N +F S CA + LG+QLH +L+ G
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ + G N+++ Y + G +E+A
Sbjct: 440 YETGCFVG-----------------------------------NALLLMYCKCGSIEEAN 464
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+LF + ++ ++W MI+GY G F +
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHG--------FGEV----------------------- 493
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS--- 237
A+ F M G P + T + A +D+GRQ T+ + ++ NS
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY----FYTMTQDYGVMPNSQHY 549
Query: 238 --LVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
+V + + G ++D++ + NM + D W +++ HG A T + + F +
Sbjct: 550 ACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKI--FAM 607
Query: 295 YPDT 298
P+
Sbjct: 608 EPEN 611
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR- 217
D D W IS Y++ EA+ +F M NG + YL G
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMIS---------GYLRNGEF 111
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 277
+L + E DL+ N ++ Y + + + +F M RD SWN+M+ G + +G
Sbjct: 112 ELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 278 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
+A +V++ M E + V++ +L+A +++ LF S N
Sbjct: 172 CVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 298 bits (762), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 237/392 (60%), Gaps = 3/392 (0%)
Query: 73 SLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI 132
+++ Y+ G M+ A + ++ S N+MI+GY++ G LEKA F P+R +
Sbjct: 160 TMITGYARRGEMEKARELFYSMMEK-NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV 218
Query: 133 AWTCMISGYLSAGQVFKACDLFDSMP-DRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 191
AWT MI+GY+ A +V A +F M +++ + W +MISGYV+N + + LF M+
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 192 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 251
G P + + ++ L GRQ+H + K+ D+ SL+SMY KCGE+ D+
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDA 338
Query: 252 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
+++F M +D ++WN+MI G + HG A +AL ++ M++ + PD +TF+ VL AC HA
Sbjct: 339 WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHA 398
Query: 312 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 371
GLV+ G F SMV Y ++P DHY +++LLGRAGK+++A + + +P P+ A++G
Sbjct: 399 GLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGT 458
Query: 372 LVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 431
L+G C + K + ++A A ++LL+L+ NA G+V L NIYA+ +R ++ +RK M+
Sbjct: 459 LLGACRVHK-NVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESN 517
Query: 432 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
V K PG SWI ++ +VH F S DR+ P ++ I
Sbjct: 518 VVKVPGYSWIEIRNKVHHFRSSDRIHPELDSI 549
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 123/252 (48%), Gaps = 11/252 (4%)
Query: 104 NSMINGYVQ-AGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 162
NS++ G + ++ +A +LFD +P + ++ M+S Y+ KA FD MP +D+
Sbjct: 96 NSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDA 155
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
+W +MI+GY + + +A LF MM N + G + D + H
Sbjct: 156 ASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMIS------GYIECGDLEKASHFF 209
Query: 223 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY-RDKISWNSMIMGLSDHGRASE 281
+V + ++ ++++ Y K +++ + +F +M ++ ++WN+MI G ++ R +
Sbjct: 210 KVAPV--RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPED 267
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 341
L ++ MLE G+ P++ L C+ + G ++ + +V+ L S+I
Sbjct: 268 GLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI-HQIVSKSTLCNDVTALTSLI 326
Query: 342 NLLGRAGKVKDA 353
++ + G++ DA
Sbjct: 327 SMYCKCGELGDA 338
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 90/224 (40%), Gaps = 40/224 (17%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ N E+ L LF M +PN S C+ LS LGRQ+H Q++
Sbjct: 255 MISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIH-QIVS-- 311
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ L N D +L S+I+ Y + G+L A
Sbjct: 312 -------------------------------KSTLCN-DVTALTSLISMYCKCGELGDAW 339
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNE 176
+LF+ + ++ +AW MISGY G KA LF M D D I + +++
Sbjct: 340 KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Query: 177 LIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
L+ ++ F M+ + P + + +G L++ +L
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKL 443
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 236 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS-DHGRASEALTVYETMLEFGL 294
N +++ + G+ID + R+F M ++ I+WNS+++G+S D R EA +++ + E
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE--- 121
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD--HYISIINLLGRAGKVKD 352
PDT ++ +L+ +K F+ M P D + ++I R G+++
Sbjct: 122 -PDTFSYNIMLSCYVRNVNFEKAQSFFDRM-------PFKDAASWNTMITGYARRGEMEK 173
Query: 353 AEEFVLRLPVEPNHAIWGALVG 374
A E + +E N W A++
Sbjct: 174 ARELFYSM-MEKNEVSWNAMIS 194
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 262/469 (55%), Gaps = 41/469 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I F NG EAL +F M S +P+ T S+ ACA LS +G+++H +++ N
Sbjct: 224 LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND 283
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+LR ++ N+ ++ Y + ++++A+
Sbjct: 284 --------KLRNDIILS--------------------------NAFVDMYAKCSRIKEAR 309
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+FD++PIRN IA T MISGY A A +F M +R+ ++W ++I+GY QN E
Sbjct: 310 FIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH------GMQVKTIYEYDLIL 234
A+SLF + P + +FA + A +A L G Q H G + ++ E D+ +
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFV 429
Query: 235 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
NSL+ MY KCG +++ Y +F M RD +SWN+MI+G + +G +EAL ++ MLE G
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE 489
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 354
PD +T +GVL+AC HAG V++G F+SM +G+ P DHY +++LLGRAG +++A+
Sbjct: 490 KPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAK 549
Query: 355 EFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN 414
+ +P++P+ IWG+L+ C + + + + ++LLE++P N+ +V L N+YA
Sbjct: 550 SMIEEMPMQPDSVIWGSLLAACKVHR-NITLGKYVAEKLLEVEPSNSGPYVLLSNMYAEL 608
Query: 415 DRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
+ ++ ++RK MR +GV K PGCSWI ++G HVF D+ P + I
Sbjct: 609 GKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQI 657
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 144/259 (55%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N +I+ Y + G LE +++FD +P RN W +++G G + +A LF SMP+RD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
W SM+SG+ Q++ EA+ F M GF +FA + A + +++G Q+H +
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
K+ + D+ + ++LV MY+KCG ++D+ R+F M R+ +SWNS+I +G A EAL
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 284 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 343
V++ MLE + PD VT V++ACA + G E+ +V + L+ + +++
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 344 LGRAGKVKDAEEFVLRLPV 362
+ ++K+A +P+
Sbjct: 299 YAKCSRIKEARFIFDSMPI 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 37/190 (19%)
Query: 217 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY---------------- 260
R +H +K+ + ++ ++N L+ Y+KCG ++D ++F M
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 261 ---------------RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 305
RD+ +WNSM+ G + H R EAL + M + G + +F VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 306 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVE 363
+AC+ ++KG ++ + + S L D YI +++++ + G V DA+ + +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLS---DVYIGSALVDMYSKCGNVNDAQRVFDEMG-D 215
Query: 364 PNHAIWGALV 373
N W +L+
Sbjct: 216 RNVVSWNSLI 225
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 295 bits (755), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 253/463 (54%), Gaps = 36/463 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI GF+ + E +LLL+ +M S + N TF SL AC+ LS Q+HAQ+ G
Sbjct: 86 MIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ D Y ++NS+IN Y G + A
Sbjct: 146 YENDVY-----------------------------------AVNSLINSYAVTGNFKLAH 170
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
LFD +P + ++W +I GY+ AG++ A LF M ++++I+WT+MISGYVQ ++ E
Sbjct: 171 LLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKE 230
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A+ LF EM P N + A A + L+QG+ +H KT D +L L+
Sbjct: 231 ALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLID 290
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MYAKCGE++++ +F N+ + +W ++I G + HG EA++ + M + G+ P+ +T
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
F VLTAC++ GLV++G +F SM Y L+P +HY I++LLGRAG + +A+ F+ +
Sbjct: 351 FTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
P++PN IWGAL+ C + K + ++ + L+ +DP + +V NI+A + + +
Sbjct: 411 PLKPNAVIWGALLKACRIHK-NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKA 469
Query: 421 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
R+ M+ +GV K PGCS I ++G H F +GDR P +E I
Sbjct: 470 AETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 40/268 (14%)
Query: 139 SGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG 198
S +L Q+ +FD D+ W MI G+ ++ ++ L+ M+ +P N
Sbjct: 62 SDFLPYAQI-----VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSS-APHNA 115
Query: 199 -TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 257
TF L A +++ ++ Q+H K YE D+ NSL++ YA G ++ +F
Sbjct: 116 YTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDR 175
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG------------------------ 293
+ D +SWNS+I G G+ ALT++ M E
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235
Query: 294 -------LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 346
+ PD V+ L+ACA G +++G + +S +N ++ +I++ +
Sbjct: 236 HEMQNSDVEPDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 347 AGKVKDAEEFVLRLPVEPNHAIWGALVG 374
G++++A E + + A W AL+
Sbjct: 295 CGEMEEALEVFKNIKKKSVQA-WTALIS 321
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/472 (35%), Positives = 265/472 (56%), Gaps = 42/472 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDS--KPNGETFISLAYACAGLSFPYLGRQLHAQLIV 58
MI GF G+ AL +F +M L DS P+ T S+ ACA L +G+Q+H+ ++
Sbjct: 249 MISGFNQRGYDLRALDIFSKM-LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVT 307
Query: 59 NGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEK 118
G + + G++ LN++I+ Y + G +E
Sbjct: 308 TG-----------------FDISGIV------------------LNALISMYSRCGGVET 332
Query: 119 AQELFDTVPIRN-KI-AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNE 176
A+ L + ++ KI +T ++ GY+ G + +A ++F S+ DRD +AWT+MI GY Q+
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 177 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN 236
EAI+LF M+ G P + T A + S+A L G+Q+HG VK+ Y + + N
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452
Query: 237 SLVSMYAKCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 295
+L++MYAK G I + R F + RD +SW SMI+ L+ HG A EAL ++ETML GL
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512
Query: 296 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 355
PD +T++GV +AC HAGLV++G + F+ M + + P HY +++L GRAG +++A+E
Sbjct: 513 PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Query: 356 FVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 415
F+ ++P+EP+ WG+L+ C + K + D+ A +RLL L+P N+ + AL N+Y+A
Sbjct: 573 FIEKMPIEPDVVTWGSLLSACRVHK-NIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 416 RHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
+ E +RK M+ V+K G SWI VK +VHVF D P +I + +
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTM 683
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 140/291 (48%), Gaps = 41/291 (14%)
Query: 103 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 162
+N+++N Y + G A++LFD +P+R +W ++S Y G + C+ FD +P RDS
Sbjct: 52 MNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDS 111
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
++WT+MI GY +AI + G+M+ G P T + ++ + ++ G+++H
Sbjct: 112 VSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSF 171
Query: 223 QVKTIYEYDLILENSLVSMYAKC-------------------------------GEIDDS 251
VK ++ + NSL++MYAKC G++D +
Sbjct: 172 IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLA 231
Query: 252 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY-PDTVTFLGVLTACAH 310
F MA RD ++WNSMI G + G AL ++ ML L PD T VL+ACA+
Sbjct: 232 MAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
Query: 311 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFV 357
+ G ++ + +V + GFD ++N L R G V+ A +
Sbjct: 292 LEKLCIGKQIHSHIVTT-----GFDISGIVLNALISMYSRCGGVETARRLI 337
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 139/335 (41%), Gaps = 48/335 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ +G Y EA+ LF M +PN T ++ + L+ G+Q+H + +G
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ Y + +L+ MY+ G + AS A + D S SMI Q G E+A
Sbjct: 444 ---EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 121 ELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA-----WTSMISG 171
ELF+T+ + + I + + S AG V + FD M D D I + M+
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 231
+ + L+ EA +M P T+ L A +D G K E
Sbjct: 561 FGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSACRVHKNIDLG--------KVAAERL 609
Query: 232 LILE-------NSLVSMYAKCGEIDDSYRIFSNM-----AYRDKISWNSM-----IMGLS 274
L+LE ++L ++Y+ CG+ +++ +I +M SW + + G+
Sbjct: 610 LLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVE 669
Query: 275 DHGRASEALTVYETMLEF-------GLYPDTVTFL 302
D G E +Y TM + G PDT + L
Sbjct: 670 D-GTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL 703
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/468 (34%), Positives = 259/468 (55%), Gaps = 43/468 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ GFY+EAL + +M S + + T+ S+ ACA LG+Q+HA +
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV---- 312
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
LRR D++ + FD NS+++ Y + G+ ++A+
Sbjct: 313 ---------LRRE-----------DFSFH--------FD----NSLVSLYYKCGKFDEAR 340
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+F+ +P ++ ++W ++SGY+S+G + +A +F M +++ ++W MISG +N E
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD---QGRQLHGMQVKTIYEYDLILENS 237
+ LF M GF P + F+ GA+ S A L G+Q H +K ++ L N+
Sbjct: 401 GLKLFSCMKREGFEPCDYAFS---GAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNA 457
Query: 238 LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 297
L++MYAKCG ++++ ++F M D +SWN++I L HG +EA+ VYE ML+ G+ PD
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Query: 298 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 357
+T L VLTAC+HAGLVD+G + F+SM Y + PG DHY +I+LL R+GK DAE +
Sbjct: 518 RITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 358 LRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRH 417
LP +P IW AL+ C + + ++ A +L L P + ++ L N++AA +
Sbjct: 578 ESLPFKPTAEIWEALLSGCRV-HGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQW 636
Query: 418 IELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILL 465
E+ +RK MR +GV+K CSWI ++ +VH F D P E + +
Sbjct: 637 EEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYI 684
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 46/329 (13%)
Query: 88 SNALEGNLNNFDDQS----LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLS 143
+ A+ GN+ F Q LN +I+ Y ++ +L A++LFD + +KIA T M+SGY +
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 144 AGQVFKACDLFDSMPD--RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
+G + A +F+ P RD++ + +MI+G+ N AI+LF +M GF P N TFA
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 202 VLFGAMGSVAYLD-QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE----IDDSYRIFS 256
+ + VA + Q Q H +K+ Y + N+LVS+Y+KC + + ++F
Sbjct: 153 SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 257 NMAYRDKISW--------------------------------NSMIMGLSDHGRASEALT 284
+ +D+ SW N+MI G + G EAL
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 285 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 344
+ M+ G+ D T+ V+ ACA AGL+ G ++ ++ FD+ S+++L
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSLY 330
Query: 345 GRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ GK +A ++P + + W AL+
Sbjct: 331 YKCGKFDEARAIFEKMPAK-DLVSWNALL 358
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 175/417 (41%), Gaps = 81/417 (19%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSF----PYLGRQLHAQL 56
MI GF+ N A+ LF +M KP+ TF S+ AGL+ Q HA
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAA 175
Query: 57 IVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQL 116
+ +G Y + +LV +YS +S +L L
Sbjct: 176 LKSG---AGYITSVSNALVSVYSKCA----SSPSL------------------------L 204
Query: 117 EKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR-DSIAWTSMISGYVQN 175
A+++FD + +++ +WT M++GY+ G +L + M D +A+ +MISGYV
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 176 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE 235
EA+ + M++ G T+ + A + L G+Q+H ++ ++ +
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFD 323
Query: 236 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS--------------------------- 268
NSLVS+Y KCG+ D++ IF M +D +SWN+
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 269 ----MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
MI GL+++G E L ++ M G P F G + +CA G G + +
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 325 VNSYGLQPGFDHYIS----IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 377
L+ GFD +S +I + + G V++A + +P + W AL+ G
Sbjct: 444 -----LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALG 494
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 260/500 (52%), Gaps = 42/500 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQM-TLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
MI G+ N Y E++ +F + S ++ + T + + A A L LG Q+H+
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
G DY + + +YS G + S AL D + N+MI+GY G+ E +
Sbjct: 251 GCYSHDY---VLTGFISLYSKCGKIKMGS-ALFREFRKPDIVAYNAMIHGYTSNGETELS 306
Query: 120 QELFDT----------------VPIRNK------IAWTCMISGYLSAGQVFKAC------ 151
LF VP+ I C+ S +LS V A
Sbjct: 307 LSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSK 366
Query: 152 --------DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 203
LFD P++ +W +MISGY QN L +AISLF EM FSP T +
Sbjct: 367 LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 426
Query: 204 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 263
A + L G+ +H + T +E + + +L+ MYAKCG I ++ R+F M +++
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 264 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 323
++WN+MI G HG+ EAL ++ ML G+ P VTFL VL AC+HAGLV +G E+FNS
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Query: 324 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDA 383
M++ YG +P HY ++++LGRAG ++ A +F+ + +EP ++W L+G C + K D
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK-DT 605
Query: 384 DVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 443
++A +++L ELDP N HV L NI++A+ + + ++R+ + + + KAPG + I +
Sbjct: 606 NLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
Query: 444 KGRVHVFSSGDRLEPHVEDI 463
HVF+SGD+ P V++I
Sbjct: 666 GETPHVFTSGDQSHPQVKEI 685
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 6/227 (2%)
Query: 129 RNKIAWTCMISGYLS-AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 187
RN I+ ++ LS G ++ A D+F S+ D + ++ G+ NE ++S+F
Sbjct: 49 RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAH 108
Query: 188 M-MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
+ + P + T+A A GR +HG V + +L+L +++V MY K
Sbjct: 109 LRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFW 168
Query: 247 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVL 305
++D+ ++F M +D I WN+MI G + E++ V+ ++ E DT T L +L
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 306 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS-IINLLGRAGKVK 351
A A + G ++ +S+ G D+ ++ I+L + GK+K
Sbjct: 229 PAVAELQELRLGMQI-HSLATKTGCY-SHDYVLTGFISLYSKCGKIK 273
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 259/472 (54%), Gaps = 11/472 (2%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G N +E ++ F+ M KP+ TF + + + L F +LGR LHA + N
Sbjct: 97 LIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKN- 155
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSL---NSMINGYVQAGQLE 117
D D +R SLV MY+ G + +A E + + +S+ N +INGY +A +
Sbjct: 156 --FVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMH 213
Query: 118 KAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNEL 177
A LF ++P RN +W+ +I GY+ +G++ +A LF+ MP+++ ++WT++I+G+ Q
Sbjct: 214 MATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGD 273
Query: 178 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS 237
AIS + EM+ G P T A + A L G ++HG + + D + +
Sbjct: 274 YETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTA 333
Query: 238 LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 297
LV MYAKCGE+D + +FSNM ++D +SW +MI G + HGR +A+ + M+ G PD
Sbjct: 334 LVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPD 393
Query: 298 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 357
V FL VLTAC ++ VD G F+SM Y ++P HY+ +++LLGRAGK+ +A E V
Sbjct: 394 EVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELV 453
Query: 358 LRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA--ND 415
+P+ P+ W AL C K A ++ LLELDP ++ L +A+ N
Sbjct: 454 ENMPINPDLTTWAALYRACKAHK-GYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNI 512
Query: 416 RHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
+ +E L + RIK ++ G S+I + G+++ FS+GD ++I L++
Sbjct: 513 QDVEKRRLSLQKRIK--ERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKL 562
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 93/246 (37%), Gaps = 70/246 (28%)
Query: 142 LSAGQVFKACD----LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
+S + K+ D +F + +R+ ++I G +N ++ F M+ G P
Sbjct: 67 VSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDR 126
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS- 256
TF + + + + GR LH +K + D + SLV MYAK G++ ++++F
Sbjct: 127 LTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEE 186
Query: 257 ----------------------------------NMAYRDKISWNSMIMGLSDHG---RA 279
+M R+ SW+++I G D G RA
Sbjct: 187 SPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRA 246
Query: 280 SE----------------------------ALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
+ A++ Y MLE GL P+ T VL+AC+ +
Sbjct: 247 KQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKS 306
Query: 312 GLVDKG 317
G + G
Sbjct: 307 GALGSG 312
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 245/464 (52%), Gaps = 37/464 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI GF G ++AL LF +M D K + T + + ACA + GRQ+
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV-------- 254
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ +E N N + N+M++ Y + G +E A+
Sbjct: 255 ---------------------------CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
LFD + ++ + WT M+ GY + A ++ +SMP +D +AW ++IS Y QN E
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 181 AISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
A+ +F E+ LN T A V L+ GR +H K + + ++L+
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
MY+KCG+++ S +F+++ RD W++MI GL+ HG +EA+ ++ M E + P+ V
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
TF V AC+H GLVD+ LF+ M ++YG+ P HY I+++LGR+G ++ A +F+
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 419
+P+ P+ ++WGAL+G C + + ++A A RLLEL+P N HV L NIYA +
Sbjct: 528 MPIPPSTSVWGALLGACKI-HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWEN 586
Query: 420 LTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
++ LRK MR+ G++K PGCS I + G +H F SGD P E +
Sbjct: 587 VSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 630
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 132/271 (48%), Gaps = 36/271 (13%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I Y S G + AC +F ++ ++D ++W SMI+G+VQ +A+ LF +M +
Sbjct: 172 LIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKAS 231
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF- 255
+ T + A + L+ GRQ+ + +L L N+++ MY KCG I+D+ R+F
Sbjct: 232 HVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD 291
Query: 256 ------------------------------SNMAYRDKISWNSMIMGLSDHGRASEALTV 285
++M +D ++WN++I +G+ +EAL V
Sbjct: 292 AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV 351
Query: 286 Y-ETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGFDHYISIINL 343
+ E L+ + + +T + L+ACA G ++ G W +S + +G++ F ++I++
Sbjct: 352 FHELQLQKNMKLNQITLVSTLSACAQVGALELGRW--IHSYIKKHGIRMNFHVTSALIHM 409
Query: 344 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+ G ++ + E V + + +W A++G
Sbjct: 410 YSKCGDLEKSRE-VFNSVEKRDVFVWSAMIG 439
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 3/222 (1%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVA 211
+FD +P +S AW ++I Y +I F +M++ P TF L A V+
Sbjct: 86 VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 271
L G+ LHGM VK+ D+ + NSL+ Y CG++D + ++F+ + +D +SWNSMI
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
G G +AL +++ M + VT +GVL+ACA ++ G ++ S + +
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC-SYIEENRVN 264
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+++++ + G ++DA+ + E ++ W ++
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTML 305
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 223/363 (61%), Gaps = 4/363 (1%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
S N+MI GY Q ++++A +LF +P R+ +W MI+G++ ++ KAC LFD MP+++
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLH 220
I+WT+MI+GYV+N+ EA+++F +M+ G P GT+ + A +A L +G+Q+H
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 221 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN--MAYRDKISWNSMIMGLSDHGR 278
+ K++++ + I+ ++L++MY+K GE+ + ++F N + RD ISWNSMI + HG
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
EA+ +Y M + G P VT+L +L AC+HAGLV+KG E F +V L +HY
Sbjct: 415 GKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYT 474
Query: 339 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 398
+++L GRAG++KD F+ + + +GA++ C + + +A K++LE
Sbjct: 475 CLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVH-NEVSIAKEVVKKVLETGS 533
Query: 399 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 458
+A +V + NIYAAN + E +R +M+ KG++K PGCSW+ V + H+F GD+ P
Sbjct: 534 DDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHP 593
Query: 459 HVE 461
E
Sbjct: 594 QFE 596
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 10/216 (4%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
S N+MI+GY Q+G+++KA ELFD +P RN ++W M+ + G++ +A +LF+ MP RD
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRD 201
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
++WT+M+ G +N + EA LF M N + +D+ QL
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNA----MITGYAQNNRIDEADQL-- 255
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
+ + E D N++++ + + E++ + +F M ++ ISW +MI G ++ E
Sbjct: 256 --FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 282 ALTVYETMLEFG-LYPDTVTFLGVLTACAH-AGLVD 315
AL V+ ML G + P+ T++ +L+AC+ AGLV+
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 129/238 (54%), Gaps = 12/238 (5%)
Query: 105 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 164
+M++GY+++ QL A+ LF +P RN ++W MI GY +G++ KA +LFD MP+R+ ++
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS 173
Query: 165 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 224
W SM+ VQ I EA++LF M ++ + + +D+ R+L
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRL----F 225
Query: 225 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 284
+ E ++I N++++ YA+ ID++ ++F M RD SWN+MI G + ++A
Sbjct: 226 DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACG 285
Query: 285 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 342
+++ M E + +++ ++T ++ +F+ M+ ++P Y+SI++
Sbjct: 286 LFDRMPE----KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 30/281 (10%)
Query: 106 MINGYVQAGQLEKAQELFDTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 164
+I GY++ G + +A+ELFD V R N + WT M+SGYL + Q+ A LF MP+R+ ++
Sbjct: 83 VITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS 142
Query: 165 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 224
W +MI GY Q+ I +A+ LF EM N L + +GR M +
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKAL---------VQRGRIDEAMNL 193
Query: 225 -KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
+ + D++ ++V AK G++D++ R+F M R+ ISWN+MI G + + R EA
Sbjct: 194 FERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEAD 253
Query: 284 TVYETMLE--FGLYPDTVT-FLGVLTACAHAGLVDKGWEL----FNSMVNSYGLQPGFDH 336
+++ M E F + +T F+ GL D+ E + +M+ Y +
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 337 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 377
+++ + + R G VK PN + +++ C
Sbjct: 314 ALNVFSKMLRDGSVK------------PNVGTYVSILSACS 342
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 136/269 (50%), Gaps = 19/269 (7%)
Query: 106 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS-IA 164
+I + G++ +A++LFD +P R+ + WT +I+GY+ G + +A +LFD + R + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 165 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 224
WT+M+SGY++++ ++ A LF EM N + +D+ +L
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWN----TMIDGYAQSGRIDKALEL----F 163
Query: 225 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 284
+ E +++ NS+V + G ID++ +F M RD +SW +M+ GL+ +G+ EA
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 285 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 344
+++ M E + +++ ++T A +D+ +LF M + F + ++I
Sbjct: 224 LFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMP-----ERDFASWNTMITGF 274
Query: 345 GRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
R ++ A R+P E N W ++
Sbjct: 275 IRNREMNKACGLFDRMP-EKNVISWTTMI 302
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 265/507 (52%), Gaps = 45/507 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+ +G Y E++ LFL+M S +P+ TF + A GL LG+QLHA + G
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D G ++ YS + + L + D S N +I+ Y QA Q E +
Sbjct: 281 FSRDASVG---NQILDFYSKHDRV-LETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 121 ELFDTVPI----RNKIAWTCMIS--GYLSAGQ--------------------------VF 148
F + R + M+S LS+ Q ++
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396
Query: 149 KACDLFD-------SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
C++F+ S+P R +++WT++ISGYVQ L + LF +M TFA
Sbjct: 397 AKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
+ A S A L G+QLH +++ ++ + LV MYAKCG I D+ ++F M R
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
+ +SWN++I +D+G A+ + M+E GL PD+V+ LGVLTAC+H G V++G E F
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 381
+M YG+ P HY +++LLGR G+ +AE+ + +P EP+ +W +++ C + K
Sbjct: 577 QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKN 636
Query: 382 DADVASRATKRLLELDPL-NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
+ +A RA ++L ++ L +A +V++ NIYAA ++ ++K MR +G++K P SW
Sbjct: 637 QS-LAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSW 695
Query: 441 ILVKGRVHVFSSGDRLEPHVEDILLQI 467
+ V ++HVFSS D+ P+ ++I+ +I
Sbjct: 696 VEVNHKIHVFSSNDQTHPNGDEIVRKI 722
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N ++ ++ GQ+ A++++D +P +N ++ MISG++ G V A DLFD+MPDR +
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVV 111
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFS--PLNGTFAVLFGAMGSVAYLDQGRQLHG 221
WT ++ Y +N EA LF +M P + TF L + Q+H
Sbjct: 112 TWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHA 171
Query: 222 MQVKTIYEYD--LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 279
VK ++ + L + N L+ Y + +D + +F + +D +++N++I G G
Sbjct: 172 FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 280 SEALTVYETMLEFGLYPDTVTFLGVLTA 307
+E++ ++ M + G P TF GVL A
Sbjct: 232 TESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 12/256 (4%)
Query: 123 FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI 182
FDT P ++ Y ++ AC LF+ +P++DS+ + ++I+GY ++ L E+I
Sbjct: 178 FDTNPFLT--VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 183 SLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMY 242
LF +M G P + TF+ + A+ + G+QLH + V T + D + N ++ Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 243 AKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFL 302
+K + ++ +F M D +S+N +I S + +L + M G F
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355
Query: 303 GVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVL 358
+L+ A+ + G +L + L D + S++++ + ++AE
Sbjct: 356 TMLSIAANLSSLQMGRQL-----HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFK 410
Query: 359 RLPVEPNHAIWGALVG 374
LP + W AL+
Sbjct: 411 SLP-QRTTVSWTALIS 425
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 273/506 (53%), Gaps = 47/506 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G NG + EA+ + M D P T IS +CA L + LG+Q+H + + G
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQ----- 115
D + + +L+ +Y+ G ++ ++ D S NS+I ++ +
Sbjct: 446 I---DLNVSVSNALMTLYAETGYLNECRKIF-SSMPEHDQVSWNSIIGALARSERSLPEA 501
Query: 116 ------LEKAQELFDTVP------------------------IRNKIA-----WTCMISG 140
++A + + + ++N IA +I+
Sbjct: 502 VVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIAC 561
Query: 141 YLSAGQVFKACDLFDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y G++ +F M +R D++ W SMISGY+ NEL+A+A+ L M+ G +
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFM 621
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+A + A SVA L++G ++H V+ E D+++ ++LV MY+KCG +D + R F+ M
Sbjct: 622 YATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 681
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
R+ SWNSMI G + HG+ EAL ++ETM L+ PD VTF+GVL+AC+HAGL+++G+
Sbjct: 682 VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF 741
Query: 319 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 378
+ F SM +SYGL P +H+ + ++LGRAG++ E+F+ ++P++PN IW ++G C
Sbjct: 742 KHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCR 801
Query: 379 SK-TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 437
+ A++ +A + L +L+P NA +V L N+YAA R +L RK+M+ V+K G
Sbjct: 802 ANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAG 861
Query: 438 CSWILVKGRVHVFSSGDRLEPHVEDI 463
SW+ +K VH+F +GD+ P + I
Sbjct: 862 YSWVTMKDGVHMFVAGDKSHPDADVI 887
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 190/435 (43%), Gaps = 67/435 (15%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACA--GLSFPYLGRQLHAQLIV 58
++ G++ NG ++EAL+ M N F+S+ AC G GRQ+H +
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 59 NGWKLDDYDGRLRRSLVRMY-SVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLE 117
+ +D + L+ MY G + YA A G++ + S NS+I+ Y QAG
Sbjct: 133 LSYAVD---AVVSNVLISMYWKCIGSVGYALCAF-GDIEVKNSVSWNSIISVYSQAGDQR 188
Query: 118 KAQELFDT---------------------------VPIRNKIAWTCMISGYLS------- 143
A +F + V + +I T SG L+
Sbjct: 189 SAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSG 248
Query: 144 -------AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSP 195
+G + A +F+ M R+++ ++ G V+ + EA LF +M + SP
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308
Query: 196 LNGTFAVLFGAMGSVAY-----LDQGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEID 249
++ +L + + L +GR++HG + T + ++ + + N LV+MYAKCG I
Sbjct: 309 --ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366
Query: 250 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 309
D+ R+F M +D +SWNSMI GL +G EA+ Y++M + P + T + L++CA
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 310 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN----LLGRAGKVKDAEEFVLRLPVEPN 365
W ++ L+ G D +S+ N L G + + + +P E +
Sbjct: 427 SL-----KWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHD 480
Query: 366 HAIWGALVGVCGLSK 380
W +++G S+
Sbjct: 481 QVSWNSIIGALARSE 495
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 180/421 (42%), Gaps = 54/421 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFP--YLGRQLHAQLIV 58
+I ++ G A +F M S+P TF SL L+ P L Q+ +
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 59 NGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEK 118
+G D + G LV ++ G + YA + + +LN ++ G V+ E+
Sbjct: 237 SGLLTDLFVGS---GLVSAFAKSGSLSYARKVF-NQMETRNAVTLNGLMVGLVRQKWGEE 292
Query: 119 AQELF-------DTVPIRNKIAWTC----------------------------------- 136
A +LF D P I +
Sbjct: 293 ATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIG 352
Query: 137 --MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+++ Y G + A +F M D+DS++W SMI+G QN EA+ + M H
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P + T + S+ + G+Q+HG +K + ++ + N+L+++YA+ G +++ +I
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRA-SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 313
FS+M D++SWNS+I L+ R+ EA+ + G + +TF VL+A +
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 314 VDKGWELFN-SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
+ G ++ ++ N+ + ++ ++I G+ G++ E+ R+ ++ W ++
Sbjct: 533 GELGKQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 373 V 373
+
Sbjct: 591 I 591
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N++IN Y++ G A+++FD +P+RN ++W C++SGY G+
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE----------------- 82
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA---MGSVAYLDQGRQLH 220
EA+ +M+ G F + A +GSV L GRQ+H
Sbjct: 83 --------------HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL-FGRQIH 127
Query: 221 GMQVKTIYEYDLILENSLVSMYAKC-GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 279
G+ K Y D ++ N L+SMY KC G + + F ++ ++ +SWNS+I S G
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187
Query: 280 SEALTVYETMLEFGLYPDTVTFLG-VLTACA 309
A ++ +M G P TF V TAC+
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 210 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 269
V + R H K + D+ L N+L++ Y + G+ + ++F M R+ +SW +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
+ G S +G EAL M++ G++ + F+ VL AC G V
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/365 (38%), Positives = 221/365 (60%), Gaps = 3/365 (0%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
S SM+ GYVQ G++E A+ELF+ +P++ IA MISG G++ KA +FDSM +R+
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
+W ++I + +N EA+ LF M G P T + S+A L G+Q+H
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
V+ ++ D+ + + L++MY KCGE+ S IF +D I WNS+I G + HG E
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415
Query: 282 ALTVY-ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 340
AL V+ E L P+ VTF+ L+AC++AG+V++G +++ SM + +G++P HY +
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
Query: 341 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 400
+++LGRAG+ +A E + + VEP+ A+WG+L+G C + + DVA K+L+E++P N
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACR-THSQLDVAEFCAKKLIEIEPEN 534
Query: 401 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD-RLEPH 459
+ ++ L N+YA+ R ++ LRK M+ + VRK+PGCSW V+ +VH F+ G P
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPE 594
Query: 460 VEDIL 464
E IL
Sbjct: 595 QESIL 599
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 135/274 (49%), Gaps = 18/274 (6%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
S NSM+ GY A++LFD +P RN I+W ++SGY+ G++ +A +FD MP+R+
Sbjct: 50 SWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERN 109
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
++WT+++ GYV N + A SLF +M ++ V+ +D +L+
Sbjct: 110 VVSWTALVKGYVHNGKVDVAESLFWKMPEKN----KVSWTVMLIGFLQDGRIDDACKLYE 165
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
M I + D I S++ K G +D++ IF M+ R I+W +M+ G + R +
Sbjct: 166 M----IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDD 221
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 341
A +++ M E V++ +L G ++ ELF M ++P ++I
Sbjct: 222 ARKIFDVMPE----KTEVSWTSMLMGYVQNGRIEDAEELFEVM----PVKPVIACN-AMI 272
Query: 342 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 375
+ LG+ G++ A + E N A W ++ +
Sbjct: 273 SGLGQKGEIAKARRVFDSMK-ERNDASWQTVIKI 305
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
S +++ GYV G+++ A+ LF +P +NK++WT M+ G+L G++ AC L++ +PD+D
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD 171
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
+IA TSMI G + + EA +F EM T+ + G +D R++
Sbjct: 172 NIARTSMIHGLCKEGRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKI-- 225
Query: 222 MQVKTIYEYDLILENSLVSM------YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 275
+D++ E + VS Y + G I+D+ +F M + I+ N+MI GL
Sbjct: 226 --------FDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQ 277
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 335
G ++A V+++M E + ++ V+ G + +LF ++ G++P F
Sbjct: 278 KGEIAKARRVFDSMKE----RNDASWQTVIKIHERNGFELEALDLF-ILMQKQGVRPTFP 332
Query: 336 HYISIINL 343
ISI+++
Sbjct: 333 TLISILSV 340
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 45/278 (16%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
D+ + SMI+G + G++++A+E+FD + R+ I WT M++GY +V A +FD MP
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 218
++ ++WTSM+ GYVQN I +A LF M P+ A
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVM------PVKPVIAC---------------- 268
Query: 219 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 278
N+++S + GEI + R+F +M R+ SW ++I +G
Sbjct: 269 -----------------NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
EAL ++ M + G+ P T + +L+ CA + G ++ +V Q D Y+
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC---QFDVDVYV 368
Query: 339 S--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+ ++ + + G++ ++ R P + + +W +++
Sbjct: 369 ASVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIIS 405
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 38/246 (15%)
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
G++ +A LFDS + +W SM++GY N + +A LF EM NG ++
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNG---LVS 87
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
G M + +D+ R++ + + E +++ +LV Y G++D + +F M ++K+
Sbjct: 88 GYMKN-GEIDEARKVFDL----MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN-- 322
SW M++G GR +A +YE + + D + ++ G VD+ E+F+
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPD----KDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 323 ---------SMVNSYGLQPGFDHYISIINLLGRA---------------GKVKDAEEFVL 358
+MV YG D I +++ G+++DAEE
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFE 258
Query: 359 RLPVEP 364
+PV+P
Sbjct: 259 VMPVKP 264
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 41/218 (18%)
Query: 8 NGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYD 67
NGF EAL LF+ M +P T IS+ CA L+ + G+Q+HAQL+ + +D Y
Sbjct: 309 NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVY- 367
Query: 68 GRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVP 127
+ SV M Y++ G+L K++ +FD P
Sbjct: 368 ---------VASVLMTM-------------------------YIKCGELVKSKLIFDRFP 393
Query: 128 IRNKIAWTCMISGYLSAGQVFKACDLFDSMP-----DRDSIAWTSMISGYVQNELIAEAI 182
++ I W +ISGY S G +A +F MP + + + + +S ++ E +
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 183 SLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
++ M + G P+ +A + +G ++ ++
Sbjct: 454 KIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEM 491
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 257/507 (50%), Gaps = 45/507 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G++ N +++ALL++ M L+ P+ TF L AC+GLS +GR +HAQ+ G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEG-NLNNFDDQSLNSMINGYVQAGQLEKA 119
+ D D ++ L+ +Y+ + A EG L S ++++ Y Q G+ +A
Sbjct: 150 F---DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 120 QELFDTV-PIRNKIAWTCMIS--------------------------------------G 140
E+F + + K W ++S
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y GQV A LFD M + I W +MISGY +N EAI +F EM+ P +
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
A V L+Q R ++ ++ Y D+ + ++L+ M+AKCG ++ + +F
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
RD + W++MI+G HGRA EA+++Y M G++P+ VTFLG+L AC H+G+V +GW
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
FN M + + + P HY +I+LLGRAG + A E + +PV+P +WGAL+ C +
Sbjct: 447 FNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
++ A ++L +DP N +V L N+YAA + +R M+ KG+ K GCSW
Sbjct: 506 -HVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 564
Query: 441 ILVKGRVHVFSSGDRLEPHVEDILLQI 467
+ V+GR+ F GD+ P E+I Q+
Sbjct: 565 VEVRGRLEAFRVGDKSHPRYEEIERQV 591
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 5/290 (1%)
Query: 87 ASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR-NKIAWTCMISGYLSAG 145
AS L N D S+I+ QL++ + ++ + T +I S G
Sbjct: 8 ASPLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 146 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 205
+ A +FD +P W ++I GY +N +A+ ++ M SP + TF L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 206 AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK-- 263
A +++L GR +H + ++ D+ ++N L+++YAKC + + +F + ++
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 264 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 323
+SW +++ + +G EAL ++ M + + PD V + VL A + +G + S
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 324 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+V GL+ D IS+ + + G+V A+ ++ PN +W A++
Sbjct: 248 VVK-MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/503 (31%), Positives = 264/503 (52%), Gaps = 45/503 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+ NG E+ L +F+QM +S + + T +S+ CA LGR +H+ +
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ +D R +L+ MYS G +D A A+ +++ S SMI GY + G +A
Sbjct: 327 FSRED---RFCNTLLDMYSKCGDLDSA-KAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 121 ELFDTVP----------------------------------IRNKIAWTCMISG-----Y 141
+LF+ + N + + +S Y
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTF 200
G + +A +F M +D I+W ++I GY +N EA+SLF ++ FSP T
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
A + A S++ D+GR++HG ++ Y D + NSLV MYAKCG + ++ +F ++A
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
+D +SW MI G HG EA+ ++ M + G+ D ++F+ +L AC+H+GLVD+GW
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 622
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
FN M + ++P +HY I+++L R G + A F+ +P+ P+ IWGAL+ C +
Sbjct: 623 FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHH 682
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
D +A + +++ EL+P N +V + NIYA ++ ++ LRK + +G+RK PGCSW
Sbjct: 683 -DVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSW 741
Query: 441 ILVKGRVHVFSSGDRLEPHVEDI 463
I +KGRV++F +GD P E+I
Sbjct: 742 IEIKGRVNIFVAGDSSNPETENI 764
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 184/393 (46%), Gaps = 55/393 (13%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ A +G + ++ LF +M S + + TF ++ + + L + G QLH ++ +G
Sbjct: 166 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSG 225
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ + G SLV Y +D A + + D S NS+INGYV G EK
Sbjct: 226 FGERNSVGN---SLVAFYLKNQRVDSARKVFD-EMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 121 ELF----------DTVPIRNKIAWTCMISGYLSAGQV-----FKAC-------------- 151
+F D I + A C S +S G+ KAC
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFA-GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 152 -----DL------FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
DL F M DR +++TSMI+GY + L EA+ LF EM G SP T
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ LD+G+++H + +D+ + N+L+ MYAKCG + ++ +FS M
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY-PDTVTFLGVLTACAHAGLVDKGWE 319
+D ISWN++I G S + A+EAL+++ +LE + PD T VL ACA DKG E
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 320 LFNSMVNSYGLQPGF--DHYI--SIINLLGRAG 348
++ Y ++ G+ D ++ S++++ + G
Sbjct: 521 -----IHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 9/255 (3%)
Query: 129 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 188
RN + +++ YL +V A +FD M +RD I+W S+I+GYV N L + +S+F +M
Sbjct: 229 RNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 189 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 248
+ G T +F + GR +H + VK + + N+L+ MY+KCG++
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 249 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 308
D + +F M+ R +S+ SMI G + G A EA+ ++E M E G+ PD T VL C
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 309 AHAGLVDKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNH 366
A L+D+G + + + GFD ++S ++++ + G +++AE + V+ +
Sbjct: 408 ARYRLLDEGKRVHEWIKEN---DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DI 463
Query: 367 AIWGALVGVCGLSKT 381
W ++G G SK
Sbjct: 464 ISWNTIIG--GYSKN 476
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y + G + +A +FD + ++ W +++ ++ + +I LF +MM+ G + TF
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ + + S+ + G QLHG +K+ + + NSLV+ Y K +D + ++F M
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
RD ISWNS+I G +G A + L+V+ ML G+ D T + V CA + L+ G
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG--- 315
Query: 321 FNSMVNSYGLQPGFDHYISIINLL 344
V+S G++ F N L
Sbjct: 316 --RAVHSIGVKACFSREDRFCNTL 337
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 241/463 (52%), Gaps = 67/463 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A +G YE+AL + +M +D KP+ T S+ + G+++H +I G
Sbjct: 213 IIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG 272
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
D Y G +S+++ Y ++ ++E ++
Sbjct: 273 IDSDVYIG-----------------------------------SSLVDMYAKSARIEDSE 297
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+F + C RD I+W S+++GYVQN E
Sbjct: 298 RVFSRL--------YC-----------------------RDGISWNSLVAGYVQNGRYNE 326
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A+ LF +M+ P F+ + A +A L G+QLHG ++ + ++ + ++LV
Sbjct: 327 ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVD 386
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MY+KCG I + +IF M D++SW ++IMG + HG EA++++E M G+ P+ V
Sbjct: 387 MYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 446
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
F+ VLTAC+H GLVD+ W FNSM YGL +HY ++ +LLGRAGK+++A F+ ++
Sbjct: 447 FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
VEP ++W L+ C + K + ++A + +++ +D N +V +CN+YA+N R E+
Sbjct: 507 CVEPTGSVWSTLLSSCSVHK-NLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEM 565
Query: 421 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
LR MR KG+RK P CSWI +K + H F SGDR P ++ I
Sbjct: 566 AKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 176/385 (45%), Gaps = 56/385 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I F + +AL F++M S P+ F S+ +C + G +H ++ G
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
D Y G +L+ MY+ L+ S GN+
Sbjct: 136 MDCDLYTGN---ALMNMYA--KLLGMGSKISVGNV------------------------- 165
Query: 121 ELFDTVPIRNK-------IAWTCMIS-GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGY 172
FD +P R A TC++ G S +VF+ MP +D +++ ++I+GY
Sbjct: 166 --FDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV------MPRKDVVSYNTIIAGY 217
Query: 173 VQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL 232
Q+ + +A+ + EM P + T + + + +G+++HG ++ + D+
Sbjct: 218 AQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDV 277
Query: 233 ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF 292
+ +SLV MYAK I+DS R+FS + RD ISWNS++ G +GR +EAL ++ M+
Sbjct: 278 YIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTA 337
Query: 293 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAG 348
+ P V F V+ ACAH + G +L + Y L+ GF I +++++ + G
Sbjct: 338 KVKPGAVAFSSVIPACAHLATLHLGKQL-----HGYVLRGGFGSNIFIASALVDMYSKCG 392
Query: 349 KVKDAEEFVLRLPVEPNHAIWGALV 373
+K A + R+ V + W A++
Sbjct: 393 NIKAARKIFDRMNV-LDEVSWTAII 416
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 133/310 (42%), Gaps = 49/310 (15%)
Query: 105 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 164
+ I QA QL + T + + A + +IS Y + + +A LF ++ +A
Sbjct: 16 TRIKSKSQAKQLH--AQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLA 72
Query: 165 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 224
W S+I + L ++A++ F EM A G P + F + + + L G +HG V
Sbjct: 73 WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIV 132
Query: 225 KTIYEYDLILENSLVSMYAK-----------------------CGE-------------I 248
+ + DL N+L++MYAK G+ I
Sbjct: 133 RLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI 192
Query: 249 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 308
D R+F M +D +S+N++I G + G +AL + M L PD+ T VL
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 309 AHAGLVDKGWELFNSMVNSYGLQPGFDH--YI--SIINLLGRAGKVKDAEEFVLRLPVEP 364
+ V KG E ++ Y ++ G D YI S++++ ++ +++D+E RL
Sbjct: 253 SEYVDVIKGKE-----IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 365 NHAIWGALVG 374
+ W +LV
Sbjct: 308 GIS-WNSLVA 316
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 242/463 (52%), Gaps = 47/463 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I NG E L LF+ M S +P+ TF S+ AC G S Y G ++H+ ++ +G
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY-GMEIHSSIVKSG 512
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
ASN+ G S+I+ Y + G +E+A+
Sbjct: 513 -------------------------MASNSSVGC----------SLIDMYSKCGMIEEAE 537
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
++ R ++ T + ++ + C ++W S+ISGYV E +
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNKRLQEMC-----------VSWNSIISGYVMKEQSED 586
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A LF MM G +P T+A + ++A G+Q+H +K + D+ + ++LV
Sbjct: 587 AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVD 646
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MY+KCG++ DS +F RD ++WN+MI G + HG+ EA+ ++E M+ + P+ VT
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVT 706
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
F+ +L ACAH GL+DKG E F M YGL P HY +++++LG++GKVK A E + +
Sbjct: 707 FISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
P E + IW L+GVC + + + +VA AT LL LDP ++ + L N+YA ++
Sbjct: 767 PFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKV 826
Query: 421 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
+ LR+ MR ++K PGCSW+ +K +HVF GD+ P E+I
Sbjct: 827 SDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEI 869
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 35/270 (12%)
Query: 40 CAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFD 99
CA LG+Q HA +I++G++ +
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTF--------------------------------- 84
Query: 100 DQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 159
LN ++ Y + A +FD +P+R+ ++W MI+GY + +FKA F+ MP
Sbjct: 85 --VLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 160 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
RD ++W SM+SGY+QN ++I +F +M G TFA++ + G Q+
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 220 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 279
HG+ V+ + D++ ++L+ MYAK +S R+F + ++ +SW+++I G +
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262
Query: 280 SEALTVYETMLEFGLYPDTVTFLGVLTACA 309
S AL ++ M + + VL +CA
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 181/404 (44%), Gaps = 45/404 (11%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M+ G+ NG +++ +F+ M + +G TF + C+ L LG Q+H ++ G
Sbjct: 151 MLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVG 210
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
D D +L+ MY+ + +G + + S +++I G VQ L A
Sbjct: 211 C---DTDVVAASALLDMYAKGKRFVESLRVFQG-IPEKNSVSWSAIIAGCVQNNLLSLAL 266
Query: 121 ELFDTVPIRN---------KIAWTCMISGYLSAG-----------------------QVF 148
+ F + N + +C L G ++
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 149 KACD-------LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
CD LFD+ + + ++ +MI+GY Q E +A+ LF +M+ G + +
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 386
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
+F A V L +G Q++G+ +K+ D+ + N+ + MY KC + +++R+F M R
Sbjct: 387 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR 446
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
D +SWN++I +G+ E L ++ +ML + PD TF +L AC G + G E+
Sbjct: 447 DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIH 505
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 365
+S+V S G+ S+I++ + G +++AE+ R N
Sbjct: 506 SSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 548
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 200/477 (41%), Gaps = 79/477 (16%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G N AL F +M ++ + + S+ +CA LS LG QLHA + +
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ DG +R + + MY+ M A L N N + QS N+MI GY Q KA
Sbjct: 312 FAA---DGIVRTATLDMYAKCDNMQDA-QILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 121 EL----------FDTVPIRNKIAWTCMISGYLSAGQVF---------------------- 148
L FD + + ++ G Q++
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Query: 149 -------KACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
+A +FD M RD+++W ++I+ + QN E + LF M+ P TF
Sbjct: 428 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 487
Query: 202 VLFGAM--GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ A GS+ Y G ++H VK+ + + SL+ MY+KCG I+++ +I S
Sbjct: 488 SILKACTGGSLGY---GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544
Query: 260 YRDK--------------------ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
R +SWNS+I G ++ +A ++ M+E G+ PD
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 604
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFV 357
T+ VL CA+ G ++ ++ LQ D YI +++++ + G + D+ +
Sbjct: 605 TYATVLDTCANLASAGLGKQIHAQVIKK-ELQS--DVYICSTLVDMYSKCGDLHDS-RLM 660
Query: 358 LRLPVEPNHAIWGALVGVCGLSKT-DADVASRATKRLLELDPLNAPGHVALCNIYAA 413
+ + W A+ +CG + + A + +R++ L+ + P HV +I A
Sbjct: 661 FEKSLRRDFVTWNAM--ICGYAHHGKGEEAIQLFERMI-LENIK-PNHVTFISILRA 713
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 231 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 290
D++ N +++ Y+K ++ + F+ M RD +SWNSM+ G +G + +++ V+ M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 291 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV 350
G+ D TF +L C+ G ++ + +V G +++++ + +
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQI-HGIVVRVGCDTDVVAASALLDMYAKGKRF 231
Query: 351 KDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 401
++ +P E N W A++ C ++ S A K E+ +NA
Sbjct: 232 VESLRVFQGIP-EKNSVSWSAIIAGC----VQNNLLSLALKFFKEMQKVNA 277
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 261/463 (56%), Gaps = 42/463 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A G ++EA+ ++ M + P TF +L AC + LGRQ HAQ
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTF--- 176
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
RLR + G N+MI+ YV+ ++ A+
Sbjct: 177 --------RLRGFC---FVYVG---------------------NTMIDMYVKCESIDCAR 204
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
++FD +P R+ I+WT +I+ Y G + A +LF+S+P +D +AWT+M++G+ QN E
Sbjct: 205 KVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQE 264
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGA---MGSVAYLDQGRQLHGMQVKTIYEYDLILENS 237
A+ F M G T A A +G+ Y D+ Q+ + ++ +++ ++
Sbjct: 265 ALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDH-VVIGSA 323
Query: 238 LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYP 296
L+ MY+KCG ++++ +F +M ++ +++SMI+GL+ HGRA EAL ++ M+ + + P
Sbjct: 324 LIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKP 383
Query: 297 DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 356
+TVTF+G L AC+H+GLVD+G ++F+SM ++G+QP DHY +++LLGR G++++A E
Sbjct: 384 NTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALEL 443
Query: 357 VLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 416
+ + VEP+ +WGAL+G C + + ++A A + L EL+P ++ L N+YA+
Sbjct: 444 IKTMSVEPHGGVWGALLGACRI-HNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGD 502
Query: 417 HIELTSLRKEMRIKGVRKAPGCSWILVK-GRVHVFSSGDRLEP 458
+ +RK ++ KG++K P SW++ K G++H F G+ P
Sbjct: 503 WGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHP 545
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 36/228 (15%)
Query: 160 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
R+ WT++I GY EAI+++G M +P++ TF+ L A G++ L+ GRQ
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 220 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS-------------- 265
H + + + N+++ MY KC ID + ++F M RD IS
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 266 -----------------WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 308
W +M+ G + + + EAL ++ M + G+ D VT G ++AC
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 309 AHAGLVDKGWELFNSMVNSYGLQPGFDHYI---SIINLLGRAGKVKDA 353
A G K + + G P DH + ++I++ + G V++A
Sbjct: 292 AQLG-ASKYADRAVQIAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEA 337
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 249/467 (53%), Gaps = 36/467 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ YEE++ L ++M + P T + + AC+ + L +++H
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH------- 259
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+Y + S LE N+++N Y G+++ A
Sbjct: 260 ----EYVSECKTE-------------PSLRLE-----------NALVNAYAACGEMDIAV 291
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+F ++ R+ I+WT ++ GY+ G + A FD MP RD I+WT MI GY++ E
Sbjct: 292 RIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNE 351
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
++ +F EM + G P T + A + L+ G + K + D+++ N+L+
Sbjct: 352 SLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALID 411
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MY KCG + + ++F +M RDK +W +M++GL+++G+ EA+ V+ M + + PD +T
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
+LGVL+AC H+G+VD+ + F M + + ++P HY ++++LGRAG VK+A E + ++
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
P+ PN +WGAL+G L D +A A K++LEL+P N + LCNIYA R +L
Sbjct: 532 PMNPNSIVWGALLGASRLH-NDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDL 590
Query: 421 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
+R+++ ++K PG S I V G H F +GD+ E+I +++
Sbjct: 591 REVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
++ Y G + A +FD D +W MISGY + + E+I L EM + SP
Sbjct: 176 LVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPT 235
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
+ T ++ A V D +++H + E L LEN+LV+ YA CGE+D + RIF
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 257 NMAYRDKISWNSMIMGLSDHG----------------------------RA---SEALTV 285
+M RD ISW S++ G + G RA +E+L +
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 286 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
+ M G+ PD T + VLTACAH G ++ G
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
G V A LF +P+ D + W +MI G+ + + E + L+ M+ G +P + TF L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 205 -GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 263
G L G++LH VK +L ++N+LV MY+ CG +D + +F D
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 264 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 309
SWN MI G + E++ + M + P +VT L VL+AC+
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACS 247
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 250/463 (53%), Gaps = 32/463 (6%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ GF +G+++EA+++F ++ P+ T S+ + +GR +H +I G
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
D + +++ MY G + Y +L + N+ I G + G ++KA
Sbjct: 283 LLKDKC---VISAMIDMYGKSGHV-YGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
E+F ++FK + + + ++WTS+I+G QN E
Sbjct: 339 EMF----------------------ELFK-----EQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A+ LF EM G P + T + A G++A L GR HG V+ ++ + ++L+
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MYAKCG I+ S +F+ M ++ + WNS++ G S HG+A E ++++E+++ L PD ++
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
F +L+AC GL D+GW+ F M YG++P +HY ++NLLGRAGK+++A + + +
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
P EP+ +WGAL+ C L + + D+A A ++L L+P N +V L NIYAA E+
Sbjct: 552 PFEPDSCVWGALLNSCRL-QNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEV 610
Query: 421 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
S+R +M G++K PGCSWI VK RV+ +GD+ P ++ I
Sbjct: 611 DSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 169/381 (44%), Gaps = 52/381 (13%)
Query: 10 FYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGR 69
+ +++ +F +M P+ +L CA LS +G+Q+H V+G +D +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF--- 152
Query: 70 LRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR 129
++G SM + Y++ G++ A+++FD + +
Sbjct: 153 ---------------------VQG-----------SMFHMYMRCGRMGDARKVFDRMSDK 180
Query: 130 NKIAWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWTSMISGYVQNELIAEAISLF 185
+ + + ++ Y G + + + M + + ++W ++SG+ ++ EA+ +F
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 186 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 245
++ GF P T + + ++G L+ GR +HG +K D + ++++ MY K
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 246 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 305
G + +F+ + N+ I GLS +G +AL ++E E + + V++ ++
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360
Query: 306 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV------KDAEEFVLR 359
CA G + ELF M G++P ++++I ++L G + + F +R
Sbjct: 361 AGCAQNGKDIEALELFREM-QVAGVKP---NHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 360 LPVEPNHAIWGALVGV---CG 377
+ + N + AL+ + CG
Sbjct: 417 VHLLDNVHVGSALIDMYAKCG 437
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 143/340 (42%), Gaps = 50/340 (14%)
Query: 140 GYLSAGQV--------FKACDL-FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 190
GY+SA + F DL S+PD +++S+I + +L ++I +F M +
Sbjct: 50 GYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFS 109
Query: 191 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 250
HG P + LF ++ G+Q+H + + + D ++ S+ MY +CG + D
Sbjct: 110 HGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 251 SYRIFSNMAYRDK-----------------------------------ISWNSMIMGLSD 275
+ ++F M+ +D +SWN ++ G +
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 335
G EA+ +++ + G PD VT VL + + +++ G L + V GL
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG-RLIHGYVIKQGLLKDKC 288
Query: 336 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC--GLSKTDADVASRATKRL 393
++I++ G++G V + + + G+ GL ++ ++
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 394 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 433
+EL+ ++ +A C A N + IE L +EM++ GV+
Sbjct: 349 MELNVVSWTSIIAGC---AQNGKDIEALELFREMQVAGVK 385
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 249/473 (52%), Gaps = 11/473 (2%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI + NGFY E + +F M + +P+ TF + AC+ +GR++H G
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ G LV MY G + A L+ ++ D S NS++ GY Q + + A
Sbjct: 171 LSSTLFVGN---GLVSMYGKCGFLSEARLVLD-EMSRRDVVSWNSLVVGYAQNQRFDDAL 226
Query: 121 EL---FDTVPIRNKIAWTCMISGYLS---AGQVFKACDLFDSMPDRDSIAWTSMISGYVQ 174
E+ ++V I + + +S V D+F M + ++W MI Y++
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286
Query: 175 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 234
N + EA+ L+ M A GF P + + A G + L G+++HG + +L+L
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 235 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
EN+L+ MYAKCG ++ + +F NM RD +SW +MI GR +A+ ++ + + GL
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 354
PD++ F+ L AC+HAGL+++G F M + Y + P +H +++LLGRAGKVK+A
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 355 EFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN 414
F+ + +EPN +WGAL+G C + +D D+ A +L +L P + +V L NIYA
Sbjct: 467 RFIQDMSMEPNERVWGALLGACRV-HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 415 DRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
R E+T++R M+ KG++K PG S + V +H F GDR P ++I ++
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYREL 578
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
++ Y S V A +FD +P+R+ I MI YV N E + +FG M P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
+ TF + A + GR++HG K L + N LVSMY KCG + ++ +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
M+ RD +SWNS+++G + + R +AL V M + D T +L A ++
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 264 bits (675), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 249/504 (49%), Gaps = 48/504 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G G Y+E L F +M+ S+ + TF ACAGL G+ +H +IV G
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ + SL MY+ G M E N++ D S S+I Y + GQ KA
Sbjct: 240 FVTTLC---VANSLATMYTECGEMQDGLCLFE-NMSERDVVSWTSLIVAYKRIGQEVKAV 295
Query: 121 ELFDTVPIRN---------------------KIAW--------------------TCMIS 139
E F + +RN ++ W M+
Sbjct: 296 ETF--IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y + G + A LF M RD I+W+++I GY Q E F M G P +
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
A L G++A ++ GRQ+H + + E + + +SL++MY+KCG I ++ IF
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
D +S +MI G ++HG++ EA+ ++E L+ G PD+VTF+ VLTAC H+G +D G+
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH 533
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
FN M +Y ++P +HY +++LL RAG++ DAE+ + + + + +W L+ C +
Sbjct: 534 YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACK-A 592
Query: 380 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 439
K D + RA +R+LELDP A V L NIY++ E ++RK M+ KGV K PG S
Sbjct: 593 KGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWS 652
Query: 440 WILVKGRVHVFSSGDRLEPHVEDI 463
I +K V F SGDR P EDI
Sbjct: 653 SIKIKDCVSAFVSGDRFHPQSEDI 676
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 162/383 (42%), Gaps = 46/383 (12%)
Query: 12 EEALLLFLQMTLSDS--KPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGR 69
+EAL+LF M + D P+ + AC S G LHA + Y G
Sbjct: 88 DEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGS 147
Query: 70 LRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG----------QLEKA 119
SL+ MY G +D + + + + ++I G V AG ++ ++
Sbjct: 148 ---SLLDMYKRVGKIDKSCRVF-SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRS 203
Query: 120 QELFDT-------------------------VPIRNKIAWTCMISG----YLSAGQVFKA 150
+EL DT V +R + C+ + Y G++
Sbjct: 204 EELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDG 263
Query: 151 CDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
LF++M +RD ++WTS+I Y + +A+ F +M P TFA +F A S+
Sbjct: 264 LCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
+ L G QLH + L + NS++ MY+ CG + + +F M RD ISW+++I
Sbjct: 324 SRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTII 383
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
G G E + M + G P +L+ + +++ G ++ +++ +GL
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGL 442
Query: 331 QPGFDHYISIINLLGRAGKVKDA 353
+ S+IN+ + G +K+A
Sbjct: 443 EQNSTVRSSLINMYSKCGSIKEA 465
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 138/325 (42%), Gaps = 67/325 (20%)
Query: 91 LEGNLNNFDDQSL-----NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAG 145
+E N+ +Q + NS + + AG L A+++FD +P + ++WT +I Y++A
Sbjct: 26 VEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTAN 85
Query: 146 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 205
+A LF +M ++ H SP +V+
Sbjct: 86 NSDEALILFSAM-----------------------------RVVDHAVSPDTSVLSVVLK 116
Query: 206 AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS 265
A G + + G LH VKT + + +SL+ MY + G+ID S R+FS M +R+ ++
Sbjct: 117 ACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVT 176
Query: 266 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-----------HAGLV 314
W ++I GL GR E LT + M DT TF L ACA H ++
Sbjct: 177 WTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVI 236
Query: 315 DKGWE----LFNSMVNSYG----LQPG---FDH--------YISIINLLGRAGK-VKDAE 354
+G+ + NS+ Y +Q G F++ + S+I R G+ VK E
Sbjct: 237 VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVE 296
Query: 355 EFV--LRLPVEPNHAIWGALVGVCG 377
F+ V PN + ++ C
Sbjct: 297 TFIKMRNSQVPPNEQTFASMFSACA 321
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 256/507 (50%), Gaps = 46/507 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G A NG EA+ LF+Q+ KP+ T S+ A + L G L Q+ V+
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP---EGLSLSKQVHVHA 443
Query: 61 WKLDDY-DGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
K+++ D + +L+ YS M A E + NFD + N+M+ GY Q+ K
Sbjct: 444 IKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH--NFDLVAWNAMMAGYTQSHDGHKT 501
Query: 120 QELFDTVPIRNK---------IAWTC------------------------------MISG 140
+LF + + + + TC ++
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 561
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y+ G + A FDS+P D +AWT+MISG ++N A +F +M G P T
Sbjct: 562 YVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
A L A + L+QGRQ+H +K D + SLV MYAKCG IDD+Y +F +
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
+ +WN+M++GL+ HG E L +++ M G+ PD VTF+GVL+AC+H+GLV + ++
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKH 741
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
SM YG++P +HY + + LGRAG VK AE + + +E + +++ L+ C + +
Sbjct: 742 MRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRV-Q 800
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
D + R +LLEL+PL++ +V L N+YAA + E+ R M+ V+K PG SW
Sbjct: 801 GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 860
Query: 441 ILVKGRVHVFSSGDRLEPHVEDILLQI 467
I VK ++H+F DR E I ++
Sbjct: 861 IEVKNKIHIFVVDDRSNRQTELIYRKV 887
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 44/291 (15%)
Query: 105 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM------P 158
+++N Y++ G++++ + LF+ +P R+ + W M+ YL G +A DL + P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 159 DRDSIAWTSMISG--------------------------------YVQNELIAEAISLFG 186
+ ++ + ISG Y+ + + + F
Sbjct: 245 NEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFA 304
Query: 187 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
+M+ TF ++ V L G+Q+H M +K + L + NSL++MY K
Sbjct: 305 DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 364
Query: 247 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 306
+ + +F NM+ RD ISWNS+I G++ +G EA+ ++ +L GL PD T VL
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 307 ACAHAGLVDKGWELFNSM-VNSYGLQPGFDHYIS--IINLLGRAGKVKDAE 354
A A + +G L + V++ + D ++S +I+ R +K+AE
Sbjct: 425 A---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 104 NSMINGYVQAGQLEKAQEL-FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 162
N++ + + G+ A+ L F+ P R I +IS Y G + A +FD MPDRD
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 163 IAWTSMISGYVQN-----ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 217
++W S+++ Y Q+ E I +A LF + T + + Y+
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 277
HG K + D + +LV++Y K G++ + +F M YRD + WN M+ + G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 278 RASEALTVYETMLEFGLYPDTVTF 301
EA+ + GL P+ +T
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITL 249
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 234 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA-----SEALTVYET 288
L N+L+SMY+KCG + + R+F M RD +SWNS++ + +A ++
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 289 MLEFGLYPDTVTFLGVLTACAHAGLVDKGW--ELFNSMVNSYGLQPGFDHYI--SIINLL 344
+ + +Y +T +L C H+G V W E F+ GL D ++ +++N+
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYV---WASESFHGYACKIGLDG--DEFVAGALVNIY 190
Query: 345 GRAGKVKDAEEFVLRLP 361
+ GKVK+ + +P
Sbjct: 191 LKFGKVKEGKVLFEEMP 207
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 249/463 (53%), Gaps = 40/463 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI GF +G + + L+ +M + P+ S+ AC + R++HAQ++ G
Sbjct: 98 MIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLG 153
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ G R ++M ++G ++G+L A+
Sbjct: 154 F------GSSRSVGLKMMEIYG-----------------------------KSGELVNAK 178
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
++FD +P R+ +A T MI+ Y G + +A +LF + +D++ WT+MI G V+N+ + +
Sbjct: 179 KMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNK 238
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A+ LF EM S T + A + L+ GR +H E + N+L++
Sbjct: 239 ALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALIN 298
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MY++CG+I+++ R+F M +D IS+N+MI GL+ HG + EA+ + M+ G P+ VT
Sbjct: 299 MYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVT 358
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
+ +L AC+H GL+D G E+FNSM + ++P +HY I++LLGR G++++A F+ +
Sbjct: 359 LVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI 418
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
P+EP+H + G L+ C + + ++ + KRL E + ++ +V L N+YA++ + E
Sbjct: 419 PIEPDHIMLGTLLSACKI-HGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKES 477
Query: 421 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
T +R+ MR G+ K PGCS I V ++H F GD PH E I
Sbjct: 478 TEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAI 520
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 150 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 209
A D+F + + + +T+MI G+V + A+ +SL+ M+ + P N + A
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD- 138
Query: 210 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 269
L R++H +K + + ++ +Y K GE+ ++ ++F M RD ++ M
Sbjct: 139 ---LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVM 195
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
I S+ G EAL +++ + DTV + ++ ++K ELF M
Sbjct: 196 INCYSECGFIKEALELFQDV----KIKDTVCWTAMIDGLVRNKEMNKALELFREM 246
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 104/240 (43%), Gaps = 29/240 (12%)
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
L + S + +H ++T ++ D + L+ + + +D +Y +FS ++
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 90
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC-------AHAGLV 314
+ + +MI G GR+++ +++Y M+ + PD VL AC HA ++
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVL 150
Query: 315 DKGW-----------ELFNS---MVNSYGL---QPGFDHYIS--IINLLGRAGKVKDAEE 355
G+ E++ +VN+ + P DH + +IN G +K+A E
Sbjct: 151 KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALE 210
Query: 356 FVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 415
+ ++ + W A++ GL + + R ++++ ++A A+C + A +D
Sbjct: 211 LFQDVKIK-DTVCWTAMID--GLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/486 (32%), Positives = 255/486 (52%), Gaps = 44/486 (9%)
Query: 17 LFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVR 76
+F QM + + PN T+ S+ C L LG Q+H+Q+I ++L+ Y + L+
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY---VCSVLID 533
Query: 77 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----------DTV 126
MY+ G +D A + L D S +MI GY Q +KA F D V
Sbjct: 534 MYAKLGKLDTAWDIL-IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 592
Query: 127 PIRNKI----------------AWTC-------------MISGYLSAGQVFKACDLFDSM 157
+ N + A C +++ Y G++ ++ F+
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Query: 158 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 217
D+IAW +++SG+ Q+ EA+ +F M G N TF A A + QG+
Sbjct: 653 EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 712
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 277
Q+H + KT Y+ + + N+L+SMYAKCG I D+ + F ++ ++++SWN++I S HG
Sbjct: 713 QVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHG 772
Query: 278 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 337
SEAL ++ M+ + P+ VT +GVL+AC+H GLVDKG F SM + YGL P +HY
Sbjct: 773 FGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHY 832
Query: 338 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 397
+ ++++L RAG + A+EF+ +P++P+ +W L+ C + K + ++ A LLEL+
Sbjct: 833 VCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK-NMEIGEFAAHHLLELE 891
Query: 398 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 457
P ++ +V L N+YA + + R++M+ KGV+K PG SWI VK +H F GD+
Sbjct: 892 PEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNH 951
Query: 458 PHVEDI 463
P ++I
Sbjct: 952 PLADEI 957
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 203/452 (44%), Gaps = 48/452 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G + G+ E+A+ LF +M L +P+ T SL AC+ + G+QLHA G
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 61 WKLDDYDGRLRRSLVRMYS---------------------VFGLMDYASNALEGNLNNF- 98
+ ++ ++ +L+ +Y+ ++ +M A L+ N+F
Sbjct: 420 FASNN---KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 99 ------------DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI--AWTC--MISGYL 142
+ + S++ ++ G LE +++ + N A+ C +I Y
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 143 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
G++ A D+ +D ++WT+MI+GY Q +A++ F +M+ G
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 262
A + L +G+Q+H + + DL +N+LV++Y++CG+I++SY F D
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 263 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
I+WN+++ G G EAL V+ M G+ + TF + A + + +G ++ +
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV-H 715
Query: 323 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 382
+++ G + ++I++ + G + DAE+ L + + N W A++ + +
Sbjct: 716 AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIIN----AYSK 770
Query: 383 ADVASRATKRLLELDPLNA-PGHVALCNIYAA 413
S A ++ N P HV L + +A
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 802
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 173/383 (45%), Gaps = 77/383 (20%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPY-LGRQLHAQLIVN 59
MI A E LF++M + PN TF + AC G S + + Q+HA+++
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL-- 214
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
Y G LR S V N +I+ Y + G ++ A
Sbjct: 215 ------YQG-LRDSTV--------------------------VCNPLIDLYSRNGFVDLA 241
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 179
+ +FD + ++ D +W +MISG +NE A
Sbjct: 242 RRVFDGLRLK-------------------------------DHSSWVAMISGLSKNECEA 270
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
EAI LF +M G P F+ + A + L+ G QLHG+ +K + D + N+LV
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
S+Y G + + IFSNM+ RD +++N++I GLS G +A+ +++ M GL PD+
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEE 355
T ++ AC+ G + +G +L ++Y + GF ++ I +++NL + ++ A +
Sbjct: 391 TLASLVVACSADGTLFRGQQL-----HAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 356 FVLRLPVEPNHAIWGALVGVCGL 378
+ L VE N +W ++ GL
Sbjct: 446 YFLETEVE-NVVLWNVMLVAYGL 467
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 172/412 (41%), Gaps = 45/412 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G + N EA+ LF M + P F S+ AC + +G QLH ++ G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D Y + +LV +Y G + A + N++ D + N++ING Q G EKA
Sbjct: 319 FSSDTY---VCNALVSLYFHLGNLISAEHIF-SNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 121 ELFDTV------PIRNKIA---WTCMISGYLSAGQ------------------------- 146
ELF + P N +A C G L GQ
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 147 -----VFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
+ A D F + + W M+ Y + + + +F +M P T+
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
+ + L+ G Q+H +KT ++ + + + L+ MYAK G++D ++ I A +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
D +SW +MI G + + +ALT + ML+ G+ D V ++ACA + +G ++
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
S G +++ L R GK++++ + N A W ALV
Sbjct: 615 AQACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALV 664
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
YL G ++ A +FD MP+R W MI LI E LF M++ +P GTF
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 201 AVLFGAM--GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 258
+ + A GSVA+ D Q+H + ++ N L+ +Y++ G +D + R+F +
Sbjct: 190 SGVLEACRGGSVAF-DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 259 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
+D SW +MI GLS + +EA+ ++ M G+ P F VL+AC ++ G
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 319 ELF---------------NSMVNSY---GLQPGFDH------------YISIINLLGRAG 348
+L N++V+ Y G +H Y ++IN L + G
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 349 KVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKT 381
+ A E R+ +EP+ +LV C T
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 192 GFSPLNGTFA-VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 250
G P + T +L G + + LD+GR+LH +K + + L L Y G++
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 251 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 310
++++F M R +WN MI L+ E ++ M+ + P+ TF GVL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 311 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV--LRLPVEPNHAI 368
+ E ++ + GL+ +I+L R G V A LRL +H+
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL---KDHSS 255
Query: 369 WGALVGVCGLSKTDAD 384
W A++ GLSK + +
Sbjct: 256 WVAMIS--GLSKNECE 269
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 212/364 (58%), Gaps = 2/364 (0%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
S SM+ GY +G++E A+E F+ +P++ IA MI G+ G++ KA +FD M DRD
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
+ W MI Y + EA+ LF +M G P + + ++A L GRQ+H
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
V+ ++ D+ + + L++MY KCGE+ + +F + +D I WNS+I G + HG E
Sbjct: 356 HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEE 415
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 341
AL ++ M G P+ VT + +LTAC++AG +++G E+F SM + + + P +HY +
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475
Query: 342 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 401
++LGRAG+V A E + + ++P+ +WGAL+G C + + D+A A K+L E +P NA
Sbjct: 476 DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK-THSRLDLAEVAAKKLFENEPDNA 534
Query: 402 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVE 461
+V L +I A+ + ++ +RK MR V K PGCSWI V +VH+F+ G ++ H E
Sbjct: 535 GTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGG-IKNHPE 593
Query: 462 DILL 465
++
Sbjct: 594 QAMI 597
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 140/273 (51%), Gaps = 20/273 (7%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
S NS+++GY G ++A++LFD + RN ++W ++SGY+ + +A ++F+ MP+R+
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
++WT+M+ GY+Q ++ EA SLF M ++ V+FG + +D+ R+L+
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLIDDGRIDKARKLYD 165
Query: 222 MQ-VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 280
M VK D++ +++ + G +D++ IF M R+ ++W +MI G + R
Sbjct: 166 MMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220
Query: 281 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 340
A ++E M E V++ +L +G ++ E F M ++P I
Sbjct: 221 VARKLFEVMPE----KTEVSWTSMLLGYTLSGRIEDAEEFFEVM----PMKPVIACNAMI 272
Query: 341 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ G G++ A V L + ++A W ++
Sbjct: 273 VG-FGEVGEISKARR-VFDLMEDRDNATWRGMI 303
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 127/246 (51%), Gaps = 13/246 (5%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
++ S M G + G+++KA++L+D +P+++ +A T MI G G+V +A +FD M
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR 199
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 218
+R+ + WT+MI+GY QN + A LF E+M + ++ T ++L G S D
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEK-TEVSWT-SMLLGYTLSGRIEDAEEF 256
Query: 219 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 278
M +K + I N+++ + + GEI + R+F M RD +W MI G
Sbjct: 257 FEVMPMKPV-----IACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGF 311
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
EAL ++ M + G+ P + + +L+ CA + G + V+++ ++ FD +
Sbjct: 312 ELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ-----VHAHLVRCQFDDDV 366
Query: 339 SIINLL 344
+ ++L
Sbjct: 367 YVASVL 372
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 132/271 (48%), Gaps = 23/271 (8%)
Query: 107 INGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWT 166
I+ + G++ +A++ FD++ + +W ++SGY S G +A LFD M +R+ ++W
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 226
++SGY++N +I EA ++F E+M V + AM Y+ +G + G
Sbjct: 84 GLVSGYIKNRMIVEARNVF-ELMPE-------RNVVSWTAMVK-GYMQEG--MVGEAESL 132
Query: 227 IYEYDLILENSLVSMYAKC---GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
+ E S M+ G ID + +++ M +D ++ +MI GL GR EA
Sbjct: 133 FWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEAR 192
Query: 284 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 343
+++ M E + VT+ ++T VD +LF M + + S++
Sbjct: 193 LIFDEMRE----RNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS-----WTSMLLG 243
Query: 344 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+G+++DAEEF +P++P A +VG
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 109/293 (37%), Gaps = 68/293 (23%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI + GF EAL LF QM +P+ + IS+ CA L+ GRQ+HA L+
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D Y + SV M YV+ G+L KA+
Sbjct: 362 FDDDVY----------VASVLMTM-------------------------YVKCGELVKAK 386
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+FD ++ I W +ISGY S G L E
Sbjct: 387 LVFDRFSSKDIIMWNSIISGYASHG-------------------------------LGEE 415
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL-HGMQVKTIYEYDLILENSLV 239
A+ +F EM + G P T + A L++G ++ M+ K + + V
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475
Query: 240 SMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLE 291
M + G++D + + +M + D W +++ H R A + + E
Sbjct: 476 DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFE 528
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/440 (32%), Positives = 240/440 (54%), Gaps = 38/440 (8%)
Query: 27 KPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDY 86
+P+ F +L ACA L GRQ+H IV+ +Y
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVS-------------------------EY 136
Query: 87 ASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQ 146
A+ D+ +S+++ Y + G L A+ +FD++ ++N I+WT M+SGY +G+
Sbjct: 137 AN----------DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 147 VFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFG 205
+A +LF +P ++ +WT++ISG+VQ+ EA S+F EM L+ + + G
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 206 AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS 265
A ++A GRQ+HG+ + ++ + + N+L+ MYAKC ++ + IFS M +RD +S
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 266 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
W S+I+G++ HG+A +AL +Y+ M+ G+ P+ VTF+G++ AC+H G V+KG ELF SM
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 326 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADV 385
YG++P HY +++LLGR+G + +AE + +P P+ W AL+ C + +
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACK-RQGRGQM 425
Query: 386 ASRATKRLLELDPLNAPG-HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK 444
R L+ L P ++ L NIYA+ +++ R+++ VRK PG S + V+
Sbjct: 426 GIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVR 485
Query: 445 GRVHVFSSGDRLEPHVEDIL 464
VF +G+ P EDI
Sbjct: 486 KETEVFYAGETSHPLKEDIF 505
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSP 195
+++ Y G A +FD MP RD IAW S+++ Q L + +S+F + + P
Sbjct: 44 LVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRP 103
Query: 196 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 255
+ F+ L A ++ +D GRQ+H + + Y D ++++SLV MYAKCG ++ + +F
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 256 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 315
++ ++ ISW +M+ G + GR EAL ++ + LY T G + +
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQS-------G 216
Query: 316 KGWELFN 322
KG E F+
Sbjct: 217 KGLEAFS 223
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
L + LH VK L N+LV++Y KCG + ++F M +RD I+W S++
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 273 LSDHGRASEAL-TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
L+ + + L GL PD F ++ ACA+ G +D G ++ + S +
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS---E 135
Query: 332 PGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRA 389
D + S++++ + G + A+ + V+ N W A+V G +K+ +
Sbjct: 136 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVS--GYAKSGRKEEALE 192
Query: 390 TKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 432
R+L + N AL + + + + +E S+ EMR + V
Sbjct: 193 LFRILPVK--NLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 233
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 260/505 (51%), Gaps = 52/505 (10%)
Query: 1 MIGGFA--WNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIV 58
MI G WN +E AL L+ +M S KP+ T+ + ACA L +GR +H+ L
Sbjct: 102 MIRGLTNTWND-HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFK 160
Query: 59 NGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEK 118
G + D + + SL+ MY+ G + YA + + D S NSMI+GY +AG +
Sbjct: 161 VGLERDVH---INHSLIMMYAKCGQVGYARKLFD-EITERDTVSWNSMISGYSEAGYAKD 216
Query: 119 AQELF----------------------------------DTVPIRNKIAWTC-----MIS 139
A +LF + + I KI + +IS
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y G + A +F+ M +D +AWT+MI+ Y QN +EA LF EM G SP GT
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ + A GSV L+ G+Q+ + ++++ + LV MY KCG ++++ R+F M
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
+++ +WN+MI + G A EAL +++ M + P +TF+GVL+AC HAGLV +G
Sbjct: 397 VKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCR 453
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
F+ M + +GL P +HY +II+LL RAG + +A EF+ R P +P+ + A++G C
Sbjct: 454 YFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACH-K 512
Query: 380 KTDADVASRATKRLLEL-DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
+ D + +A + L+E+ + NA +V N+ A E +R MR +GV K PGC
Sbjct: 513 RKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGC 572
Query: 439 SWILVKGRVHVFSSG-DRLEPHVED 462
SWI ++G + F +G D L+ ED
Sbjct: 573 SWIEIEGELMEFLAGSDYLQCGRED 597
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 245/469 (52%), Gaps = 69/469 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI ++ G EAL +F +M SD KPN TF ++ +C S LG+Q+H LIV
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG-LIVK- 181
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
W +Y S+ G +S+++ Y +AGQ+++A+
Sbjct: 182 W-----------------------NYDSHIFVG----------SSLLDMYAKAGQIKEAR 208
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
E+F+ +P R+ ++ T +I+GY G L E
Sbjct: 209 EIFECLPERDVVSCTAIIAGYAQLG-------------------------------LDEE 237
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A+ +F + + G SP T+A L A+ +A LD G+Q H ++ + +L+NSL+
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTV 299
MY+KCG + + R+F NM R ISWN+M++G S HG E L ++ M E + PD V
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMV-NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 358
T L VL+ C+H + D G +F+ MV YG +PG +HY I+++LGRAG++ +A EF+
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Query: 359 RLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHI 418
R+P +P + G+L+G C + + D+ +RL+E++P NA +V L N+YA+ R
Sbjct: 418 RMPSKPTAGVLGSLLGACRVHLS-VDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWA 476
Query: 419 ELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
++ ++R M K V K PG SWI + +H F + DR P E++L ++
Sbjct: 477 DVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKM 525
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/505 (31%), Positives = 258/505 (51%), Gaps = 48/505 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+IG + + EA LF +M L +G S AC + Y G+Q+H + G
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
D + G SL+ MYS G++ A +L + S+N++I GY Q LE+A
Sbjct: 560 LDRDLHTGS---SLIDMYSKCGIIKDARKVF-SSLPEWSVVSMNALIAGYSQ-NNLEEAV 614
Query: 121 ELFDTVPIR----NKIAWTCMIS---------------------GYLSAGQVF------- 148
LF + R ++I + ++ G+ S G+
Sbjct: 615 VLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGM 674
Query: 149 --------KACDLFDSMPDRDSIA-WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
+AC LF + SI WT M+SG+ QN EA+ + EM G P T
Sbjct: 675 YMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
F + ++ L +GR +H + ++ D + N+L+ MYAKCG++ S ++F M
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 260 YRDKI-SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
R + SWNS+I G + +G A +AL ++++M + + PD +TFLGVLTAC+HAG V G
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 854
Query: 319 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 378
++F M+ YG++ DH +++LLGR G +++A++F+ ++P+ +W +L+G C +
Sbjct: 855 KIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRI 914
Query: 379 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
D + ++L+EL+P N+ +V L NIYA+ + +LRK MR +GV+K PG
Sbjct: 915 HGDDIR-GEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGY 973
Query: 439 SWILVKGRVHVFSSGDRLEPHVEDI 463
SWI V+ R H+F++GD+ + I
Sbjct: 974 SWIDVEQRTHIFAAGDKSHSEIGKI 998
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 153/347 (44%), Gaps = 44/347 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G G A+ F M S K T S+ A ++ LG +HA+ I G
Sbjct: 298 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ Y G SLV MYS M+ A+ E L +D N+MI GY G+ K
Sbjct: 358 LASNIYVGS---SLVSMYSKCEKMEAAAKVFEA-LEEKNDVFWNAMIRGYAHNGESHKVM 413
Query: 121 ELF----------------------------------DTVPIRNKIAWT-----CMISGY 141
ELF ++ I+ K+A ++ Y
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G + A +F+ M DRD++ W ++I YVQ+E +EA LF M G A
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA 533
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
A V L QG+Q+H + VK + DL +SL+ MY+KCG I D+ ++FS++
Sbjct: 534 STLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 308
+S N++I G S + EA+ +++ ML G+ P +TF ++ AC
Sbjct: 594 SVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 171/351 (48%), Gaps = 10/351 (2%)
Query: 28 PNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYA 87
PN TF + CA + GRQ+H +I G + + Y G +LV MY+ + A
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGG---ALVDMYAKCDRISDA 214
Query: 88 SNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLS 143
E ++ + + +GYV+AG E+A +F+ + + +A+ +I+ Y+
Sbjct: 215 RRVFEWIVDP-NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIR 273
Query: 144 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 203
G++ A LF M D +AW MISG+ + AI F M T +
Sbjct: 274 LGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 204 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 263
A+G VA LD G +H +K ++ + +SLVSMY+KC +++ + ++F + ++
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 264 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 323
+ WN+MI G + +G + + + ++ M G D TF +L+ CA + ++ G + F+S
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHS 452
Query: 324 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
++ L +++++ + G ++DA + R+ + ++ W ++G
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIG 502
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 116/231 (50%), Gaps = 9/231 (3%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+ ++S Y ++ A +F+++ +++ + W +MI GY N + + LF +M + G++
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
+ TF L + L+ G Q H + +K +L + N+LV MYAKCG ++D+ +I
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F M RD ++WN++I SEA +++ M G+ D L AC H +
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 315 DKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLP 361
+G + V+ ++ G D + S+I++ + G +KDA + LP
Sbjct: 546 YQGKQ-----VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 23/232 (9%)
Query: 115 QLEKAQELFDTVPIRNKIAW----------------------TCMISGYLSAGQVFKACD 152
+L K++++FD +P R +A ++ Y QV A
Sbjct: 57 KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
FD + ++D AW SM+S Y + + F + + P TF+++
Sbjct: 117 QFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETN 175
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
++ GRQ+H +K E + +LV MYAKC I D+ R+F + + + W + G
Sbjct: 176 VEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG 235
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
G EA+ V+E M + G PD + F+ V+ G + LF M
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 275
G+ +H + + + L N++V +YAKC ++ + + F + +D +WNSM+ S
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSS 137
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 335
G+ + L + ++ E ++P+ TF VL+ CA V+ G ++ SM+ GL+
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLERNSY 196
Query: 336 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
+++++ + ++ DA V V+PN W L
Sbjct: 197 CGGALVDMYAKCDRISDARR-VFEWIVDPNTVCWTCL 232
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/497 (30%), Positives = 255/497 (51%), Gaps = 38/497 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I A N +A +F +M + T+ L AC+G S+ + + +H + G
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 61 WKLDDYDGRLRRSLVRMYS-VFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
D Y + +L+ YS GL + L ++ D S NSM+ G V+AG+L A
Sbjct: 148 LSSDIY---VPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSM----------- 168
+ LFD +P R+ I+W M+ GY ++ KA +LF+ MP+R++++W++M
Sbjct: 205 RRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDME 264
Query: 169 ----------------------ISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 206
I+GY + L+ EA L +M+A G + A
Sbjct: 265 MARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAA 324
Query: 207 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 266
L G ++H + ++ + + N+L+ MYAKCG + ++ +F+++ +D +SW
Sbjct: 325 CTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSW 384
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
N+M+ GL HG EA+ ++ M G+ PD VTF+ VL +C HAGL+D+G + F SM
Sbjct: 385 NTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEK 444
Query: 327 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVA 386
Y L P +HY +++LLGR G++K+A + V +P+EPN IWGAL+G C + + D+A
Sbjct: 445 VYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRM-HNEVDIA 503
Query: 387 SRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGR 446
L++LDP + + L NIYAA + + +R +M+ GV K G S + ++
Sbjct: 504 KEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDG 563
Query: 447 VHVFSSGDRLEPHVEDI 463
+H F+ D+ P + I
Sbjct: 564 IHEFTVFDKSHPKSDQI 580
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+IS Q A +F+ + + + S+I + QN +A +F EM G
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFAD 116
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG--EIDDSYRI 254
N T+ L A ++L + +H K D+ + N+L+ Y++CG + D+ ++
Sbjct: 117 NFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F M+ RD +SWNSM+ GL G +A +++ M + D +++ +L A +
Sbjct: 177 FEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREM 232
Query: 315 DKGWELFNSM 324
K +ELF M
Sbjct: 233 SKAFELFEKM 242
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 207 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 266
+ A L+Q +QLH ++ DL + L+S + C + + + R+F+ + +
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
NS+I + + + +A V+ M FGL+ D T+ +L AC+ + W M++
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-----GQSWLPVVKMMH 140
Query: 327 SYGLQPGF--DHYI--SIINLLGRAG--KVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
++ + G D Y+ ++I+ R G V+DA + ++ E + W +++G GL K
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLG--GLVK 197
Query: 381 TDADVASRATKRLLELDP 398
R +RL + P
Sbjct: 198 AG---ELRDARRLFDEMP 212
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/504 (31%), Positives = 261/504 (51%), Gaps = 48/504 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGET---FISLAYACAGLSFPYLGRQLHAQLI 57
M+ G+A G EEA+ +F + L + + ++ F ++ + A + LGRQ+H I
Sbjct: 190 MVSGYATRGRVEEAIKVF-NLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 58 VNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLE 117
NG L + L +LV MYS ++ A + + + + + ++M+ GY Q G+
Sbjct: 249 KNG--LLGFVA-LSNALVTMYSKCESLNEACKMFDSS-GDRNSITWSAMVTGYSQNGESL 304
Query: 118 KAQELFDTV------PI---------------------------------RNKIAWTCMI 138
+A +LF + P R+ A T ++
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALV 364
Query: 139 SGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG 198
Y AG + A FD + +RD WTS+ISGYVQN EA+ L+ M G P +
Sbjct: 365 DMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDP 424
Query: 199 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 258
T A + A S+A L+ G+Q+HG +K + ++ + ++L +MY+KCG ++D +F
Sbjct: 425 TMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRT 484
Query: 259 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
+D +SWN+MI GLS +G+ EAL ++E ML G+ PD VTF+ +++AC+H G V++GW
Sbjct: 485 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW 544
Query: 319 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 378
FN M + GL P DHY +++LL RAG++K+A+EF+ ++ +W L+ C
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACK- 603
Query: 379 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
+ ++ A ++L+ L + +V L IY A R ++ + K MR GV K GC
Sbjct: 604 NHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGC 663
Query: 439 SWILVKGRVHVFSSGDRLEPHVED 462
SWI +K + HVF GD + P +E+
Sbjct: 664 SWIELKNQYHVFVVGDTMHPMIEE 687
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 135/245 (55%), Gaps = 12/245 (4%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF- 193
T ++ Y AG V +F MP+R++ W++M+SGY + EAI +F +
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 194 -SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 252
S + F + ++ + Y+ GRQ+H + +K + L N+LV+MY+KC ++++
Sbjct: 217 GSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEAC 276
Query: 253 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 312
++F + R+ I+W++M+ G S +G + EA+ ++ M G+ P T +GVL AC+
Sbjct: 277 KMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDIC 336
Query: 313 LVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAI 368
+++G +L +S+ L+ GF+ ++ +++++ +AG + DA + L E + A+
Sbjct: 337 YLEEGKQL-----HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVAL 390
Query: 369 WGALV 373
W +L+
Sbjct: 391 WTSLI 395
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA---ISLFGEMMAHGF 193
+++ Y G++ KA +F+++ +D ++W S+I+GY QN I+ + + LF EM A
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 194 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 253
P T A +F A S+ GRQ H + VK D+ ++ SLV MY K G ++D +
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 254 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML---EFGLYPDTVTFLGVLTACA 309
+F+ M R+ +W++M+ G + GR EA+ V+ L E G D V F VL++ A
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLA 232
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 275
GR +HG ++T + N LV+ YAKCG++ ++ IF+ + +D +SWNS+I G S
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 276 HGRASEALTVYETMLEF---GLYPDTVTFLGVLTACA--HAGLVDKGWELFNSMVNSYGL 330
+G S + TV + E + P+ T G+ A + + V + ++S+G
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG- 151
Query: 331 QPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
D Y+ S++ + +AG V+D + +P E N W +V
Sbjct: 152 ----DIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMV 191
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 239/454 (52%), Gaps = 36/454 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I F+ +A + QM S P+ TF L A + + +G Q H+Q++ G
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ D Y + SLV MY+ G + A
Sbjct: 148 FQNDVY---VENSLVHMYA--------------------------------NCGFIAAAG 172
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+F + R+ ++WT M++GY G V A ++FD MP R+ W+ MI+GY +N +
Sbjct: 173 RIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEK 232
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
AI LF M G + + + L+ G + + VK+ +LIL +LV
Sbjct: 233 AIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVD 292
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
M+ +CG+I+ + +F + D +SW+S+I GL+ HG A +A+ + M+ G P VT
Sbjct: 293 MFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVT 352
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
F VL+AC+H GLV+KG E++ +M +G++P +HY I+++LGRAGK+ +AE F+L++
Sbjct: 353 FTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
V+PN I GAL+G C + K + +VA R L+++ P ++ +V L NIYA + ++
Sbjct: 413 HVKPNAPILGALLGACKIYK-NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKI 471
Query: 421 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 454
SLR M+ K V+K PG S I + G+++ F+ GD
Sbjct: 472 ESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGD 505
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 33/252 (13%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
+F + + + + +I + ++A + +M+ P N TF L A +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
+ G Q H V+ ++ D+ +ENSLV MYA CG I + RIF M +RD +SW SM+ G
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 273 LSDHGRA-------------------------------SEALTVYETMLEFGLYPDTVTF 301
G +A+ ++E M G+ +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 302 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 361
+ V+++CAH G ++ G + +V S+ + +++++ R G ++ A LP
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 362 VEPNHAIWGALV 373
E + W +++
Sbjct: 312 -ETDSLSWSSII 322
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 251/499 (50%), Gaps = 44/499 (8%)
Query: 5 FAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLD 64
A+ + E++ L+ M S S P+ +F + +CA LS P G+QLH + G + +
Sbjct: 28 LAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETE 87
Query: 65 DYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFD-DQSLNSMINGYVQAGQLEKAQELF 123
+ + +L+ MY GL+ A E N + N++I+GY ++ A +F
Sbjct: 88 PF---VLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 124 D---------------------TVP----IRNKIAWTCM--------------ISGYLSA 144
TVP + + C+ I+ Y+
Sbjct: 145 RRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC 204
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
G V LFD MP + I W ++ISGY QN L + + L+ +M + G P T +
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
+ + G ++ + + ++ + N+ +SMYA+CG + + +F M + +
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 324
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
SW +MI HG L +++ M++ G+ PD F+ VL+AC+H+GL DKG ELF +M
Sbjct: 325 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 384
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 384
Y L+PG +HY +++LLGRAG++ +A EF+ +PVEP+ A+WGAL+G C + K + D
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK-NVD 443
Query: 385 VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK 444
+A A +++E +P N +V + NIY+ + + +R MR + RK PG S++ K
Sbjct: 444 MAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHK 503
Query: 445 GRVHVFSSGDRLEPHVEDI 463
GRVH+F +GDR E++
Sbjct: 504 GRVHLFLAGDRSHEQTEEV 522
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 12/218 (5%)
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
S W + L +E+ISL+ M+ G SP +F + + S++ G+QLH
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS--WNSMIMGLSDHGRA 279
K E + + +L+SMY KCG + D+ ++F ++S +N++I G + + +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 280 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 339
++A ++ M E G+ D+VT LG++ C + G L V G D ++
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG-----GLDSEVA 192
Query: 340 IIN----LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
++N + + G V+ +PV+ W A++
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVI 229
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 240/470 (51%), Gaps = 38/470 (8%)
Query: 28 PNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYA 87
P+ TF +L +C+ Y G QLH+Q+ G+ D Y + +V MY+ FG M A
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMY---VSTGVVDMYAKFGKMGCA 132
Query: 88 SNALE--------------------GNLNN----FDDQS-------LNSMINGYVQAGQL 116
NA + G L+ FD N+M++G+V++G +
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDM 192
Query: 117 EKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNE 176
A+ LFD + + I WT MI GY + + A LFD+MP+R+ ++W +MI GY QN+
Sbjct: 193 TSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNK 252
Query: 177 LIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE 235
E I LF EM A P + T + A+ L G H + + + +
Sbjct: 253 QPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVC 312
Query: 236 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 295
+++ MY+KCGEI+ + RIF M + SWN+MI G + +G A AL ++ TM+
Sbjct: 313 TAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEK 371
Query: 296 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 355
PD +T L V+TAC H GLV++G + F+ M GL +HY +++LLGRAG +K+AE+
Sbjct: 372 PDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAED 430
Query: 356 FVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 415
+ +P EPN I + + CG K D + A R K+ +EL+P N +V L N+YAA+
Sbjct: 431 LITNMPFEPNGIILSSFLSACGQYK-DIERAERILKKAVELEPQNDGNYVLLRNLYAADK 489
Query: 416 RHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILL 465
R + ++ MR +K GCS I + V F SGD PH I L
Sbjct: 490 RWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHL 539
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Query: 153 LFDSMPDRD-SIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSV 210
LFD P RD S SMI Y++ ++ +L+ ++ F+P N TF L +
Sbjct: 32 LFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLS 91
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
+ QG QLH + + D+ + +V MYAK G++ + F M +R ++SW ++I
Sbjct: 92 MCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALI 151
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
G G A +++ M D V + ++ +G + LF+ M + +
Sbjct: 152 SGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI 208
Query: 331 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+ ++I+ + A + +P E N W ++G
Sbjct: 209 T-----WTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWNTMIG 246
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/447 (32%), Positives = 243/447 (54%), Gaps = 43/447 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYAC----AGLSFPY-LGRQLHAQ 55
MI G+ +G +E LLL +M+ S K +G T + A + + P L R +HA+
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 56 LIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQ 115
+I +LDD + ++++ YV++G+
Sbjct: 166 IIKCDVELDDV-----------------------------------LITALVDTYVKSGK 190
Query: 116 LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN 175
LE A+ +F+T+ N + T MISGY++ G V A ++F++ +D + + +M+ G+ ++
Sbjct: 191 LESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRS 250
Query: 176 -ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 234
E ++ ++ M GF P TFA + GA + + G+Q+H +K+ + +
Sbjct: 251 GETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKM 310
Query: 235 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
+SL+ MYAKCG I+D+ R+F M ++ SW SMI G +G EAL ++ M EF +
Sbjct: 311 GSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRI 370
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 354
P+ VTFLG L+AC+H+GLVDKG+E+F SM Y ++P +HY I++L+GRAG + A
Sbjct: 371 EPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAF 430
Query: 355 EFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG-HVALCNIYAA 413
EF +P P+ IW AL+ C L + ++AS A L +L+ PG ++AL N+YA+
Sbjct: 431 EFARAMPERPDSDIWAALLSSCNL-HGNVELASIAASELFKLNADKRPGAYLALSNVYAS 489
Query: 414 NDRHIELTSLRKEMRIKGVRKAPGCSW 440
ND+ ++ +R+ M+ + + K G SW
Sbjct: 490 NDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 70/309 (22%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
+L G + A +FD +P A+ MISGY+++ L+ E + L M G T
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 201 AVLFGA---MGSVAYLDQG--RQLHGMQVKTIYEYDLILENSLVSMYAKCGE-------- 247
+++ A GS L + R +H +K E D +L +LV Y K G+
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 248 -----------------------IDDSYRIFSNMAYRDKISWNSMIMGLSDHGR-ASEAL 283
++D+ IF+ +D + +N+M+ G S G A ++
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSV 258
Query: 284 TVYETMLEFGLYPDTVTFLGVLTACA-----------HAGLVDKG----WELFNSMVNSY 328
+Y +M G +P+ TF V+ AC+ HA ++ G ++ +S+++ Y
Sbjct: 259 DMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 329 GLQPG-------FDH--------YISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWG 370
G FD + S+I+ G+ G ++A E R+ +EPN+ +
Sbjct: 319 AKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFL 378
Query: 371 ALVGVCGLS 379
+ C S
Sbjct: 379 GALSACSHS 387
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 242/468 (51%), Gaps = 41/468 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYL-GRQLHAQLIVN 59
MI G A G E L LF +M S+ KP+ TF SL AC+ S + GR +HA ++ N
Sbjct: 175 MISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN 234
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
GW S+A+E NS+++ Y + G + A
Sbjct: 235 GW--------------------------SSAVEAK---------NSVLSFYTKLGSRDDA 259
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 179
+++ + +++W +I + G+ KA ++F P+++ + WT+MI+GY +N
Sbjct: 260 MRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGE 319
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
+A+ F EMM G + + + A +A L G+ +HG + ++ + N+LV
Sbjct: 320 QALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALV 379
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
++YAKCG+I ++ R F ++A +D +SWN+M+ HG A +AL +Y+ M+ G+ PD V
Sbjct: 380 NLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNV 439
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
TF+G+LT C+H+GLV++G +F SMV Y + DH +I++ GR G + +A++
Sbjct: 440 TFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATT 499
Query: 360 ----LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 415
+ N++ W L+G C + ++ +K L +P V L N+Y +
Sbjct: 500 YSSLVTDSSNNSSWETLLGACS-THWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTG 558
Query: 416 RHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
R E +R+EM +G++K PGCSWI V +V F GD P +E++
Sbjct: 559 RWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEEL 606
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 169/393 (43%), Gaps = 80/393 (20%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M+ ++ G ++EA+ LF Q+ SD+KP+ +F ++ CA L GR++ + +I +G
Sbjct: 41 MLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSG 100
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ + SL+ MY S+ L N F D +S
Sbjct: 101 FCA---SLPVNNSLIDMYG------KCSDTLSAN-KVFRDMCCDS--------------- 135
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
RN++ W ++ Y++A Q A D+F MP R + AW MISG+ +
Sbjct: 136 --------RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGS----VAYLDQGRQLHGMQVKTIYEYDLILEN 236
+SLF EM+ F P TF+ L A + V Y GR +H + +K + + +N
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVY---GRMVHAVMLKNGWSSAVEAKN 244
Query: 237 SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS---------------------------- 268
S++S Y K G DD+ R ++ ++SWNS
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVT 304
Query: 269 ---MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
MI G +G +AL + M++ G+ D + VL AC+ L+ G M+
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-----KMI 359
Query: 326 NSYGLQPGFDHYI----SIINLLGRAGKVKDAE 354
+ + GF Y +++NL + G +K+A+
Sbjct: 360 HGCLIHCGFQGYAYVGNALVNLYAKCGDIKEAD 392
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 125/279 (44%), Gaps = 42/279 (15%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
T I+ +G++ A +FD MP+ D++AW +M++ Y + L EAI+LF ++
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P + +F + S+ + GR++ + +++ + L + NSL+ MY KC + + ++
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 255 FSNM---------------AY------------------RDKISWNSMIMGLSDHGRASE 281
F +M AY R +WN MI G + G+
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--- 338
L++++ MLE PD TF ++ AC+ D ++ MV++ L+ G+ +
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACS----ADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 339 -SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 376
S+++ + G DA + + V W +++ C
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDAC 281
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Query: 232 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 291
L+ S ++ AK G I + ++F M D ++WN+M+ S G EA+ ++ +
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 292 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 351
PD +F +L+ CA G V G ++ S+V G S+I++ G+
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 352 DAEEFVLRLPVEP-NHAIWGALV 373
A + + + N W +L+
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLL 145
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 257/503 (51%), Gaps = 44/503 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+A + + A F +M + PN T S+ +C + G +H ++ G
Sbjct: 82 MITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLG 141
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQ----- 115
+ Y + +++ MY+ + A+ + ++ +D + ++I G+ G
Sbjct: 142 MEGSLY---VDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 116 -------LE-------------KAQELFDTVPIRNKIAWTCMISG--------------Y 141
LE +A D+V +I + + G Y
Sbjct: 199 KMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLY 258
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G + +A F M D+D I W ++IS +++ +EA+ +F + GF P TF
Sbjct: 259 CRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFT 317
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-Y 260
L A ++A L+ G+QLHG + + ++ L N+L+ MYAKCG I DS R+F +
Sbjct: 318 SLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR 377
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
R+ +SW SM++G HG +EA+ +++ M+ G+ PD + F+ VL+AC HAGLV+KG +
Sbjct: 378 RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKY 437
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
FN M + YG+ P D Y +++LLGRAGK+ +A E V R+P +P+ + WGA++G C K
Sbjct: 438 FNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHK 497
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
+ ++ A ++++EL P +V L IYAA + ++ +RK MR+ G +K G SW
Sbjct: 498 HNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSW 557
Query: 441 ILVKGRVHVFSSGDRLEPHVEDI 463
ILV+ +V F+ D++ P+ +
Sbjct: 558 ILVENQVFSFAVSDKMCPNASSV 580
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 15/290 (5%)
Query: 127 PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFG 186
P ++ I T +I Y G V +A LFD MPDRD +AWT+MI+GY + A A F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 187 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
EM+ G SP T + + + ++ L G +HG+ VK E L ++N++++MYA C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 247 -EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLG 303
++ + IF ++ ++ ++W ++I G + G L +Y+ ML + P +T
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI-- 218
Query: 304 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 363
+ A A V G ++ S++ G Q SI++L R G + +A+ + + +
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-D 276
Query: 364 PNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 413
+ W L+ L ++D+ A LL + G V C + +
Sbjct: 277 KDLITWNTLIS--ELERSDSSEA------LLMFQRFESQGFVPNCYTFTS 318
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 249/472 (52%), Gaps = 36/472 (7%)
Query: 5 FAWN----GFYEE-------ALLLFLQMTLSDS--KPNGETFISLAYACAGLSFPYLGRQ 51
F+WN GF E A+ LF +M +SD +PN TF S+ ACA G+Q
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEM-MSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 52 LHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYV 111
+H + G+ D++ + +LVRMY + G M A N ++ + M +
Sbjct: 150 IHGLALKYGFGGDEF---VMSNLVRMYVMCGFMKDARVLF---YKNIIEKDMVVMTDRRK 203
Query: 112 QAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISG 171
+ G++ + W MI GY+ G A LFD M R ++W +MISG
Sbjct: 204 RDGEI---------------VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISG 248
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 231
Y N +A+ +F EM P T + A+ + L+ G LH + D
Sbjct: 249 YSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRID 308
Query: 232 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 291
+L ++L+ MY+KCG I+ + +F + + I+W++MI G + HG+A +A+ + M +
Sbjct: 309 DVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQ 368
Query: 292 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 351
G+ P V ++ +LTAC+H GLV++G F+ MV+ GL+P +HY +++LLGR+G +
Sbjct: 369 AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLD 428
Query: 352 DAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIY 411
+AEEF+L +P++P+ IW AL+G C + + + ++ R L+++ P ++ +VAL N+Y
Sbjct: 429 EAEEFILNMPIKPDDVIWKALLGACRM-QGNVEMGKRVANILMDMVPHDSGAYVALSNMY 487
Query: 412 AANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
A+ E++ +R M+ K +RK PGCS I + G +H F D P ++I
Sbjct: 488 ASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEI 539
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 54/274 (19%)
Query: 150 ACDLFDSMPDRDSIAWTSMISGYVQNE----LIAEAISLFGEMMAHGF-SPLNGTFAVLF 204
A +F+ MP R+ +W ++I G+ +++ LIA I+LF EMM+ F P TF +
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIA--ITLFYEMMSDEFVEPNRFTFPSVL 135
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS----YR------- 253
A + +G+Q+HG+ +K + D + ++LV MY CG + D+ Y+
Sbjct: 136 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 254 ----------------------------------IFSNMAYRDKISWNSMIMGLSDHGRA 279
+F M R +SWN+MI G S +G
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 280 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 339
+A+ V+ M + + P+ VT + VL A + G ++ G E + G++ +
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSA 314
Query: 340 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+I++ + G ++ A RLP E N W A++
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMI 347
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G++ NGF+++A+ +F +M D +PN T +S+ A + L LG LH +G
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++DD G +L+ MYS + G +EKA
Sbjct: 305 IRIDDVLG---SALIDMYS--------------------------------KCGIIEKAI 329
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD---RDS-IAWTSMISGYVQNE 176
+F+ +P N I W+ MI+G+ GQ A D F M R S +A+ ++++
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 177 LIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
L+ E F +M++ G P + + +G LD+ +
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG----EIDDSYRIFSNM 258
LF + + + Q+H + +K+ D + ++ A ++D +++IF+ M
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 259 AYRDKISWNSMIMGL--SDHGRASEALTV-YETMLEFGLYPDTVTFLGVLTACAHAGLVD 315
R+ SWN++I G SD +A A+T+ YE M + + P+ TF VL ACA G +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 316 KGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAI 368
+G ++ + + YG G D ++ +++ + G +KDA + +E + +
Sbjct: 146 EGKQI-HGLALKYGF--GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/467 (30%), Positives = 254/467 (54%), Gaps = 10/467 (2%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+ GF +L L+++M P+ T+ SL A + S G L A +
Sbjct: 842 LFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHI---- 895
Query: 61 WKLD-DYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
WK + +++ +L+ YS G + A + + DD + +M++ Y + ++ A
Sbjct: 896 WKFGFGFHVKIQTTLIDFYSATGRIREARKVFD-EMPERDDIAWTTMVSAYRRVLDMDSA 954
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 179
L + + +N+ C+I+GY+ G + +A LF+ MP +D I+WT+MI GY QN+
Sbjct: 955 NSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYR 1014
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
EAI++F +MM G P T + + A + L+ G+++H ++ + D+ + ++LV
Sbjct: 1015 EAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALV 1074
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
MY+KCG ++ + +F N+ ++ WNS+I GL+ HG A EAL ++ M + P+ V
Sbjct: 1075 DMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAV 1134
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
TF+ V TAC HAGLVD+G ++ SM++ Y + +HY +++L +AG + +A E +
Sbjct: 1135 TFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGN 1194
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 419
+ EPN IWGAL+ C + K + +A A +L+ L+P+N+ + L ++YA +R +
Sbjct: 1195 MEFEPNAVIWGALLDGCRIHK-NLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRD 1253
Query: 420 LTSLRKEMRIKGVRK-APGCSWILVKGRVHVFSSGDRLEPHVEDILL 465
+ +R MR G+ K PG S I + R H+F++ D+ +++ L
Sbjct: 1254 VAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCL 1300
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 260/507 (51%), Gaps = 50/507 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A A++LF +M + +G T L AC L +QLH + G
Sbjct: 111 LISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRV--DLIKQLHCFSVSGG 168
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D Y + + V YS GL+ A + G D+ S NSMI Y Q + KA
Sbjct: 169 F--DSYSS-VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 121 ELFDTVPIRN-KI----------AWTCM---ISGYLSAGQVFKA---------------- 150
L+ + + KI A T + I G G++ KA
Sbjct: 226 ALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFY 285
Query: 151 -----CD-------LFDSMPDRDSIAWTSMISGYVQNE-LIAEAISLFGEMMAHGFSPLN 197
CD +F + D + W +MISGY NE L EA+ F +M G P +
Sbjct: 286 SKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDD 345
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
+F + A +++ Q +Q+HG+ +K+ I + + N+L+S+Y K G + D+ +F
Sbjct: 346 CSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFD 405
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
M + +S+N MI G + HG +EAL +Y+ ML+ G+ P+ +TF+ VL+ACAH G VD+
Sbjct: 406 RMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDE 465
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 376
G E FN+M ++ ++P +HY +I+LLGRAGK+++AE F+ +P +P W AL+G C
Sbjct: 466 GQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGAC 525
Query: 377 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 436
K A +A RA L+ + PL A +V L N+YA + E+ S+RK MR K +RK P
Sbjct: 526 RKHKNMA-LAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKP 584
Query: 437 GCSWILVKGRVHVFSSGDRLEPHVEDI 463
GCSWI VK + HVF + D P + ++
Sbjct: 585 GCSWIEVKKKKHVFVAEDWSHPMIREV 611
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 139/305 (45%), Gaps = 24/305 (7%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N +N Y + G+L A+ F + N ++ ++ Y ++ A LFD +P D++
Sbjct: 47 NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV 106
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
++ ++ISGY A+ LF M GF T + L A +D +QLH
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA--CCDRVDLIKQLHCFS 164
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRASEA 282
V ++ + N+ V+ Y+K G + ++ +F M RD++SWNSMI+ H ++A
Sbjct: 165 VSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKA 224
Query: 283 LTVYETMLEFGLYPDTVTFLGVLTACA-----------HAGLVDKGWELFNSMVNSYGLQ 331
L +Y+ M+ G D T VL A H L+ G+ NS V S GL
Sbjct: 225 LALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ-NSHVGS-GL- 281
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 391
I + G + D+E+ V + + P+ +W ++ +++ ++ A ++ +
Sbjct: 282 ------IDFYSKCGGCDGMYDSEK-VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFR 334
Query: 392 RLLEL 396
++ +
Sbjct: 335 QMQRI 339
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 241/460 (52%), Gaps = 37/460 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M+ G+A +G EAL + + S K N +F L AC L RQ H Q++V G
Sbjct: 150 MVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAG 209
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ SN + S+I+ Y + GQ+E A+
Sbjct: 210 -------------------------FLSNVVLSC----------SIIDAYAKCGQMESAK 234
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
FD + +++ WT +ISGY G + A LF MP+++ ++WT++I+GYV+
Sbjct: 235 RCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNR 294
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A+ LF +M+A G P TF+ A S+A L G+++HG ++T + I+ +SL+
Sbjct: 295 ALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLID 354
Query: 241 MYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
MY+K G ++ S R+F + D + WN+MI L+ HG +AL + + M++F + P+
Sbjct: 355 MYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRT 414
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
T + +L AC+H+GLV++G F SM +G+ P +HY +I+LLGRAG K+ +
Sbjct: 415 TLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEE 474
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 419
+P EP+ IW A++GVC + + ++ +A L++LDP ++ ++ L +IYA + +
Sbjct: 475 MPFEPDKHIWNAILGVCRIHGNE-ELGKKAADELIKLDPESSAPYILLSSIYADHGKWEL 533
Query: 420 LTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 459
+ LR M+ + V K SWI ++ +V F+ D H
Sbjct: 534 VEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAH 573
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 144/303 (47%), Gaps = 34/303 (11%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N +I Y++ G+ A ++FD + +RN +W M+SGY+ +G + +A +FDSMP+RD +
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
+W +M+ GY Q+ + EA+ + E G +FA L A L RQ HG
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD--------------------- 262
+ + +++L S++ YAKCG+++ + R F M +D
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 263 ----------KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 312
+SW ++I G G + AL ++ M+ G+ P+ TF L A A
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 313 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI-WGA 371
+ G E+ M+ + ++P S+I++ ++G + +A E V R+ + + + W
Sbjct: 326 SLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSL-EASERVFRICDDKHDCVFWNT 383
Query: 372 LVG 374
++
Sbjct: 384 MIS 386
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 114/277 (41%), Gaps = 45/277 (16%)
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH-GMQVK 225
S +S + +++A+S + G A L G L QG+ +H +++
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 226 TIYEYDLILENSLVSMYAKCGEIDDSYR-------------------------------I 254
+ +L N L+ MY KCG+ D+ + +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F +M RD +SWN+M++G + G EAL Y+ G+ + +F G+LTAC + +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 315 DKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 370
N + L GF + SII+ + G+++ A+ + V+ H IW
Sbjct: 196 Q-----LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH-IWT 249
Query: 371 ALVGVCGLSKT-DADVASRATKRLLELDPLNAPGHVA 406
L+ G +K D + A + + E +P++ +A
Sbjct: 250 TLIS--GYAKLGDMEAAEKLFCEMPEKNPVSWTALIA 284
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 239/461 (51%), Gaps = 38/461 (8%)
Query: 8 NGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSF--PYLGRQLHAQLIVNGWKLDD 65
NG EA F MTL+ +PN TFI+L C + LG LH
Sbjct: 49 NGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG----------- 97
Query: 66 YDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDT 125
Y +L L R + + G ++I Y + G+ +KA+ +FD
Sbjct: 98 YACKL--GLDRNHVMVG---------------------TAIIGMYSKRGRFKKARLVFDY 134
Query: 126 VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLF 185
+ +N + W MI GY+ +GQV A +FD MP+RD I+WT+MI+G+V+ EA+ F
Sbjct: 135 MEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWF 194
Query: 186 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 245
EM G P A ++ L G +H + ++ ++ + NSL+ +Y +C
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 246 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 305
G ++ + ++F NM R +SWNS+I+G + +G A E+L + M E G PD VTF G L
Sbjct: 255 GCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGAL 314
Query: 306 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 365
TAC+H GLV++G F M Y + P +HY +++L RAG+++DA + V +P++PN
Sbjct: 315 TACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPN 374
Query: 366 HAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRK 425
+ G+L+ C + +A R K L +L+ + +V L N+YAA+ + + +R+
Sbjct: 375 EVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRR 434
Query: 426 EMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQ 466
+M+ G++K PG S I + +HVF +GD HVE ++
Sbjct: 435 KMKGLGLKKQPGFSSIEIDDCMHVFMAGD--NAHVETTYIR 473
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 43/232 (18%)
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ--GRQL 219
+++WTS I+ +N +AEA F +M G P + TF L G + G L
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 220 HG----------------------------MQVKTIYEY----DLILENSLVSMYAKCGE 247
HG + + +++Y + + N+++ Y + G+
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 248 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 307
+D++ ++F M RD ISW +MI G G EAL + M G+ PD V + L A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 308 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEE 355
C + G + F V+ Y L F + + S+I+L R G V+ A +
Sbjct: 216 CTNLGALS-----FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 134/345 (38%), Gaps = 85/345 (24%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI GF G+ EEALL F +M +S KP+ I+ AC L G +H ++
Sbjct: 177 MINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLS-- 234
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
D+ +R S NS+I+ Y + G +E A+
Sbjct: 235 ---QDFKNNVRVS------------------------------NSLIDLYCRCGCVEFAR 261
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
++F + R ++W +I G+ + G E
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAH-------------------------------E 290
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SL 238
++ F +M GF P TF A V +++G + + +K Y +E+ L
Sbjct: 291 SLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI-MKCDYRISPRIEHYGCL 349
Query: 239 VSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHGRA---SEALTVYETMLEFGL 294
V +Y++ G ++D+ ++ +M + +++ S++ S+HG +E L + T L
Sbjct: 350 VDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKS 409
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSM---VNSYGL--QPGF 334
+ + V + A D WE + M + GL QPGF
Sbjct: 410 HSNYVILSNMYAA-------DGKWEGASKMRRKMKGLGLKKQPGF 447
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 15/176 (8%)
Query: 264 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 323
+SW S I L+ +GR +EA + M G+ P+ +TF+ +L+ C G G E
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEALGD 93
Query: 324 MVNSYGLQPGFDHY-----ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 378
+++ Y + G D +II + + G+ K A V + N W ++ G
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKA-RLVFDYMEDKNSVTWNTMID--GY 150
Query: 379 SKT-DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 433
++ D A++ ++ E D ++ A+ N + E +EM+I GV+
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLIS---WTAMINGFVKKGYQEEALLWFREMQISGVK 203
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 237/454 (52%), Gaps = 43/454 (9%)
Query: 17 LFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVR 76
++L+M P+ TF L + LG++ HAQ+++ G D D +R SL+
Sbjct: 49 VYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGL---DKDPFVRTSLLN 105
Query: 77 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 136
MYS G L AQ +FD ++ AW
Sbjct: 106 MYS--------------------------------SCGDLRSAQRVFDDSGSKDLPAWNS 133
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG---- 192
+++ Y AG + A LFD MP+R+ I+W+ +I+GYV EA+ LF EM
Sbjct: 134 VVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEA 193
Query: 193 -FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 251
P T + + A G + L+QG+ +H K E D++L +L+ MYAKCG ++ +
Sbjct: 194 FVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 252 YRIFSNM-AYRDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACA 309
R+F+ + + +D ++++MI L+ +G E ++ M + P++VTF+G+L AC
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
Query: 310 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 369
H GL+++G F M+ +G+ P HY +++L GR+G +K+AE F+ +P+EP+ IW
Sbjct: 314 HRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 370 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 429
G+L+ + D A KRL+ELDP+N+ +V L N+YA R +E+ +R EM +
Sbjct: 374 GSLLSGSRML-GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEV 432
Query: 430 KGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
KG+ K PGCS++ V+G VH F GD + E I
Sbjct: 433 KGINKVPGCSYVEVEGVVHEFVVGDESQQESERI 466
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 40/234 (17%)
Query: 161 DSIAWTSMISGYVQNELIAE---AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 217
+S W +I V N + IS++ M H SP TF L + + +L G+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGE------------------------------ 247
+ H + + D + SL++MY+ CG+
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 248 -IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-----EFGLYPDTVTF 301
IDD+ ++F M R+ ISW+ +I G G+ EAL ++ M E + P+ T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 302 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 355
VL+AC G +++G + ++ ++ Y ++ ++I++ + G ++ A+
Sbjct: 203 STVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKR 255
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 208/364 (57%), Gaps = 7/364 (1%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACD-LFDSMPDRDS 162
N+MI+GY++ G + +A+ LFD +P R+ ++W ++ GY + G + +AC+ +FD MP+R+
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDM-EACERVFDDMPERNV 152
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
+W +I GY QN ++E + F M+ G P + T ++ A + D G+ +H
Sbjct: 153 FSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHK 212
Query: 222 MQVKTIY-EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 280
Y + D+ ++N+L+ MY KCG I+ + +F + RD ISWN+MI GL+ HG +
Sbjct: 213 YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 281 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 340
EAL ++ M G+ PD VTF+GVL AC H GLV+ G FNSM + + P +H +
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCV 332
Query: 341 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 400
++LL RAG + A EF+ ++PV+ + IW L+G + K D+ A + L++L+P N
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKK-VDIGEVALEELIKLEPRN 391
Query: 401 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV-KGRVHVFSSGDRLEPH 459
V L NIY R + L+ MR G +K G SWI G V +SSG++ P
Sbjct: 392 PANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEK-HPR 450
Query: 460 VEDI 463
E++
Sbjct: 451 TEEL 454
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 50/248 (20%)
Query: 114 GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV 173
G + A ++F + +N + WT MI+GYL + A FD P+RD + W +MISGY+
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 174 QNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI 233
+ + EA SLF +M D++
Sbjct: 102 EMGNMLEARSLFDQMPCR---------------------------------------DVM 122
Query: 234 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 293
N+++ YA G+++ R+F +M R+ SWN +I G + +GR SE L ++ M++ G
Sbjct: 123 SWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG 182
Query: 294 -LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI-----SIINLLGRA 347
+ P+ T VL+ACA G D F V+ YG G++ ++I++ G+
Sbjct: 183 SVVPNDATMTLVLSACAKLGAFD-----FGKWVHKYGETLGYNKVDVNVKNALIDMYGKC 237
Query: 348 GKVKDAEE 355
G ++ A E
Sbjct: 238 GAIEIAME 245
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/483 (31%), Positives = 249/483 (51%), Gaps = 45/483 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKP----------------------------NGET 32
MI GF NG + A++LF +M + DS P +G
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRE 232
Query: 33 FISLAYACAGLSFPYLGRQLHAQLIVNGWKL---DDYDGRLRR----------SLVRMYS 79
+ AY + + G+ A+ + + DD+ G R S+++ Y
Sbjct: 233 DLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYL 292
Query: 80 VFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMIS 139
G + ++ L + + D S N+MI+GYV ++E A LF +P R+ +W M+S
Sbjct: 293 KVGDV-VSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVS 351
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
GY S G V A F+ P++ +++W S+I+ Y +N+ EA+ LF M G P T
Sbjct: 352 GYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHT 411
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
L A + L G Q+H + VKT+ D+ + N+L++MY++CGEI +S RIF M
Sbjct: 412 LTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 260 Y-RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
R+ I+WN+MI G + HG ASEAL ++ +M G+YP +TF+ VL ACAHAGLVD+
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 319 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 378
F SM++ Y ++P +HY S++N+ G+ ++A + +P EP+ +WGAL+ C +
Sbjct: 531 AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRI 590
Query: 379 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
+ +A A + + L+P ++ +V L N+YA E + +R M K ++K G
Sbjct: 591 Y-NNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGS 649
Query: 439 SWI 441
SW+
Sbjct: 650 SWV 652
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 169/383 (44%), Gaps = 62/383 (16%)
Query: 99 DDQSLNSMINGYVQAGQ---LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFD 155
D + N+MI+GYV G LE+A++LFD +P R+ +W MISGY ++ +A LF+
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 156 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG----------------- 198
MP+R++++W++MI+G+ QN + A+ LF +M SPL
Sbjct: 161 KMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV 220
Query: 199 -------------------TFAVLFGAMGSV----AYLDQGRQL----HGMQVKTIYEYD 231
T V +G G V DQ L HG + + + +
Sbjct: 221 LGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKN 280
Query: 232 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 291
++ NS++ Y K G++ + +F M RD ISWN+MI G R +A ++ M
Sbjct: 281 VVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN 340
Query: 292 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 351
D ++ +++ A G V+ F + + + SII + K
Sbjct: 341 ----RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYK 391
Query: 352 DAEEFVLRLPVE---PN-HAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVAL 407
+A + +R+ +E P+ H + L GL + + + + +++ + P H AL
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSASTGL--VNLRLGMQMHQIVVKTVIPDVPVHNAL 449
Query: 408 CNIYAANDRHIELTSLRKEMRIK 430
+Y+ +E + EM++K
Sbjct: 450 ITMYSRCGEIMESRRIFDEMKLK 472
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 43/263 (16%)
Query: 101 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 160
++ N +N +++G + +A+++F+ + RN + W MISGY+ ++ +A LFD MP R
Sbjct: 41 RATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR 100
Query: 161 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 220
D + W +MISGYV + G + +L++ R+L
Sbjct: 101 DVVTWNTMISGYV--------------------------------SCGGIRFLEEARKL- 127
Query: 221 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 280
+ D N+++S YAK I ++ +F M R+ +SW++MI G +G
Sbjct: 128 ---FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVD 184
Query: 281 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL--FNSMVNSYGLQPGFDHYI 338
A+ ++ M P G++ + L + W L + S+V+ G + Y
Sbjct: 185 SAVVLFRKMPVKDSSPLCALVAGLIK---NERLSEAAWVLGQYGSLVS--GREDLVYAYN 239
Query: 339 SIINLLGRAGKVKDAEEFVLRLP 361
++I G+ G+V+ A ++P
Sbjct: 240 TLIVGYGQRGQVEAARCLFDQIP 262
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 223/413 (53%), Gaps = 18/413 (4%)
Query: 66 YDGRLRRSLVRMYSVFGLMDYASNALEG--------------NLNNFDDQSLNSMINGYV 111
+DG L RSLV ++ GL Y N +E + F S+ S
Sbjct: 119 FDGMLERSLVSWNTMIGL--YTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176
Query: 112 QAGQLEKAQEL-FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMIS 170
A + +K L T N T ++ Y G + A +F+SM D+ S+ W+SM++
Sbjct: 177 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVA 236
Query: 171 GYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY 230
GYVQN+ EA+ L+ T + + A ++A L +G+Q+H + K+ +
Sbjct: 237 GYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS 296
Query: 231 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 290
++ + +S V MYAKCG + +SY IFS + ++ WN++I G + H R E + ++E M
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 291 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV 350
+ G++P+ VTF +L+ C H GLV++G F M +YGL P HY ++++LGRAG +
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 416
Query: 351 KDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNI 410
+A E + +P +P +IWG+L+ C + K + ++A A ++L EL+P NA HV L NI
Sbjct: 417 SEAYELIKSIPFDPTASIWGSLLASCRVYK-NLELAEVAAEKLFELEPENAGNHVLLSNI 475
Query: 411 YAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
YAAN + E+ RK +R V+K G SWI +K +VH FS G+ P + +I
Sbjct: 476 YAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREI 528
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 121/239 (50%), Gaps = 4/239 (1%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I+ Y G V A +FD M +R ++W +MI Y +N + +EA+ +F EM GF
Sbjct: 102 LINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFS 161
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
T + + A G + ++LH + VKT + +L + +L+ +YAKCG I D+ ++F
Sbjct: 162 EFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
+M + ++W+SM+ G + EAL +Y L + T V+ AC++ + +
Sbjct: 222 SMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV-EPNHAIWGALVG 374
G ++ ++++ G S +++ + G ++ E +++ V E N +W ++
Sbjct: 282 GKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLR--ESYIIFSEVQEKNLELWNTIIS 337
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 215 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 274
+ + HG ++ E D+ L N L++ Y+KCG ++ + ++F M R +SWN+MI GL
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMI-GLY 137
Query: 275 DHGR-ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 333
R SEAL ++ M G T VL+AC G+ E S
Sbjct: 138 TRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKTCID 194
Query: 334 FDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG--VCGLSKTDADVASRA 389
+ Y+ ++++L + G +KDA + V + + W ++V V + +A + R
Sbjct: 195 LNLYVGTALLDLYAKCGMIKDAVQ-VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 390 TKRL-LELDPLNAPGHVALCNIYAA 413
+R+ LE + + C+ AA
Sbjct: 254 AQRMSLEQNQFTLSSVICACSNLAA 278
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 240/436 (55%), Gaps = 6/436 (1%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I +A + E AL +F +M L P+ +F + ACA GRQ+H I +G
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
D + + +LV +Y G + A L+ + D S NS+++ Y++ G +++A+
Sbjct: 171 LVTDVF---VENTLVNVYGRSGYFEIARKVLD-RMPVRDAVSWNSLLSAYLEKGLVDEAR 226
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
LFD + RN +W MISGY +AG V +A ++FDSMP RD ++W +M++ Y E
Sbjct: 227 ALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNE 286
Query: 181 AISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
+ +F +M+ +G T + A S+ L QG +H K E + L +LV
Sbjct: 287 VLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALV 346
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
MY+KCG+ID + +F + RD +WNS+I LS HG +AL ++ M+ G P+ +
Sbjct: 347 DMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGI 406
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
TF+GVL+AC H G++D+ +LF M + Y ++P +HY +++LLGR GK+++AEE V
Sbjct: 407 TFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNE 466
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 419
+P + + +L+G C + A R RLLEL+ ++ G+ + N+YA++ R +
Sbjct: 467 IPADEASILLESLLGACK-RFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEK 525
Query: 420 LTSLRKEMRIKGVRKA 435
+ R+ MR + V ++
Sbjct: 526 VIDGRRNMRAERVNRS 541
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 226
S+I Y + A+++F EM+ P +F + A + ++GRQ+HG+ +K+
Sbjct: 110 SVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS 169
Query: 227 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 286
D+ +EN+LV++Y + G + + ++ M RD +SWNS++ + G EA ++
Sbjct: 170 GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALF 229
Query: 287 ETMLE-------------------------FGLYP--DTVTFLGVLTACAHAGLVDKGWE 319
+ M E F P D V++ ++TA AH G ++ E
Sbjct: 230 DEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 354
+FN M++ +P +S+++ G + E
Sbjct: 290 VFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE---IDDSYRIFSNMAYRDKISWNSM 269
L + +Q H +KT +D + LV+ A E + ++ I + + + + NS+
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 329
I ++ ALTV+ ML ++PD +F VL ACA ++G ++ + S G
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS-G 170
Query: 330 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
L +++N+ GR+G + A + + R+PV + W +L+
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLL 213
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 118/329 (35%), Positives = 198/329 (60%), Gaps = 2/329 (0%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+ ++ Y G + A +FD++ R+ ++W ++I+G+ + +A+ LF M+ GF
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P + ++A LFGA S +L+QG+ +H +K+ + N+L+ MYAK G I D+ +I
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F +A RD +SWNS++ + HG EA+ +E M G+ P+ ++FL VLTAC+H+GL+
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
D+GW + M G+ P HY+++++LLGRAG + A F+ +P+EP AIW AL+
Sbjct: 380 DEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 434
C + K + ++ + A + + ELDP + HV L NIYA+ R + +RK+M+ GV+K
Sbjct: 439 ACRMHK-NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 435 APGCSWILVKGRVHVFSSGDRLEPHVEDI 463
P CSW+ ++ +H+F + D P E+I
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 146/283 (51%), Gaps = 7/283 (2%)
Query: 83 LMDYASNALEGNLNNFDDQSLNSMING-----YVQAGQLEKAQELFDTVPIRNKIAWTCM 137
L+ +SN LEG+ D + N+++ + G++ A + ++ + + +
Sbjct: 43 LLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAH-ILQSIFRHDIVMGNTL 101
Query: 138 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
++ Y G + +A +F+ MP RD + WT++ISGY Q++ +A+ F +M+ G+SP
Sbjct: 102 LNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNE 161
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 257
T + + A + G QLHG VK ++ ++ + ++L+ +Y + G +DD+ +F
Sbjct: 162 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
+ R+ +SWN++I G + +AL +++ ML G P ++ + AC+ G +++G
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 318 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
+ M+ S F +++++ ++G + DA + RL
Sbjct: 282 KWVHAYMIKSGEKLVAFAGN-TLLDMYAKSGSIHDARKIFDRL 323
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 134/338 (39%), Gaps = 48/338 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G++ + +ALL F QM PN T S+ A A G QLH + G
Sbjct: 132 LISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D + + +L+ +Y+ +GLMD A + L + +D S N++I G+ + EKA
Sbjct: 192 F---DSNVHVGSALLDLYTRYGLMDDAQLVFDA-LESRNDVSWNALIAGHARRSGTEKAL 247
Query: 121 ELFDTVPIRN----------------------------------------KIAWTCMISG 140
ELF + +R+ A ++
Sbjct: 248 ELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y +G + A +FD + RD ++W S+++ Y Q+ EA+ F EM G P +F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ A LD+G + + K + ++V + + G+++ + R M
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 261 RDKIS-WNSMIMGLSDHGRASEALTVYETMLEFGLYPD 297
+ W +++ H + L Y F L PD
Sbjct: 427 EPTAAIWKALLNACRMH--KNTELGAYAAEHVFELDPD 462
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 248 bits (632), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 191/329 (58%), Gaps = 3/329 (0%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+ +I + G+ A +FD M D+I W S+I G+ QN A+ LF M GF
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
T + A +A L+ G Q H VK Y+ DLIL N+LV MY KCG ++D+ R+
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRV 315
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F+ M RD I+W++MI GL+ +G + EAL ++E M G P+ +T +GVL AC+HAGL+
Sbjct: 316 FNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+ GW F SM YG+ P +HY +I+LLG+AGK+ DA + + + EP+ W L+G
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 434
C + + + +A A K+++ LDP +A + L NIYA + + + +R MR +G++K
Sbjct: 436 ACRVQR-NMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKK 494
Query: 435 APGCSWILVKGRVHVFSSGDRLEPHVEDI 463
PGCSWI V ++H F GD P + ++
Sbjct: 495 EPGCSWIEVNKQIHAFIIGDNSHPQIVEV 523
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 3/183 (1%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I+ Y+ + A LFD MP R+ I+WT+MIS Y + ++ +A+ L M+ P
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
T++ + S + R LH +K E D+ + ++L+ ++AK GE +D+ +F
Sbjct: 162 VYTYS---SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
M D I WNS+I G + + R+ AL +++ M G + T VL AC L++
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 317 GWE 319
G +
Sbjct: 279 GMQ 281
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 48/310 (15%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI ++ +++AL L + M + +PN T+ S+ +C G+S R LH +I G
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEG 189
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D + +R +L+ +++ G + A + + + D NS+I G+ Q + + A
Sbjct: 190 LESDVF---VRSALIDVFAKLGEPEDALSVFDEMVTG-DAIVWNSIIGGFAQNSRSDVAL 245
Query: 121 ELFDTVPIRNKIAWTCMISG-------------------------------------YLS 143
ELF + IA ++ Y
Sbjct: 246 ELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCK 305
Query: 144 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 203
G + A +F+ M +RD I W++MISG QN EA+ LF M + G P T +
Sbjct: 306 CGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGV 365
Query: 204 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRIFSNMAYR 261
A L+ G + +K +Y D + E+ ++ + K G++DD+ ++ + M
Sbjct: 366 LFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE 424
Query: 262 -DKISWNSMI 270
D ++W +++
Sbjct: 425 PDAVTWRTLL 434
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 24/225 (10%)
Query: 178 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS 237
+ A+ + +HG + T++ L S + +G + + + L N
Sbjct: 42 LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNV 101
Query: 238 LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 297
L++MY K ++D++++F M R+ ISW +MI S +AL + ML + P+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 298 TVTFLGVLTAC--------AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGK 349
T+ VL +C H G++ +G E + V S ++I++ + G+
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCGIIKEGLE-SDVFVRS-----------ALIDVFAKLGE 209
Query: 350 VKDAEEFVLRLPVEPNHAIWGALVGVCGLSK-TDADVASRATKRL 393
+DA V V + +W +++G G ++ + +DVA KR+
Sbjct: 210 PEDALS-VFDEMVTGDAIVWNSIIG--GFAQNSRSDVALELFKRM 251
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/467 (31%), Positives = 238/467 (50%), Gaps = 36/467 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI + G +EA LF +M S+ P+ ++ AC R ++ LI N
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
VRM D L +++ Y AG ++ A+
Sbjct: 243 --------------VRM---------------------DTHLLTALVTMYAGAGCMDMAR 267
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
E F + +RN T M+SGY G++ A +FD +D + WT+MIS YV+++ E
Sbjct: 268 EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQE 327
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A+ +F EM G P + + A ++ LD+ + +H E +L + N+L++
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MYAKCG +D + +F M R+ +SW+SMI LS HG AS+AL+++ M + + P+ VT
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
F+GVL C+H+GLV++G ++F SM + Y + P +HY +++L GRA +++A E + +
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
PV N IWG+L+ C + + ++ A KR+LEL+P + V + NIYA R ++
Sbjct: 508 PVASNVVIWGSLMSACRI-HGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDV 566
Query: 421 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
++R+ M K V K G S I G+ H F GD+ +I ++
Sbjct: 567 RNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKL 613
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y S G++ A ++FD M RD + W +MI Y + L+ EA LF EM P
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA----------------- 243
+ A G + R ++ ++ D L +LV+MYA
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
Query: 244 --------------KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 289
KCG +DD+ IF +D + W +MI + EAL V+E M
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 290 LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGK 349
G+ PD V+ V++ACA+ G++DK + +S ++ GL+ ++IN+ + G
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 350 VKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 387
+ + ++P N W +++ + +D S
Sbjct: 395 LDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALS 431
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 150 ACDLFDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAM 207
A ++F S+P +SI + + ++ A LF + + H L+ +F + A+
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSE-PRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 267
V+ L +G +LHG+ K D +E + MYA CG I+ + +F M++RD ++WN
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 268 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 327
+MI G EA ++E M + + PD + +++AC G + ++ ++ +
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 328 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV 362
++ +++ + AG + A EF ++ V
Sbjct: 242 -DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 256/502 (50%), Gaps = 44/502 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ G++ NG AL + M + KP+ T +S+ A + L +G+++H + +G
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D + +LV MY+ G ++ A +G L + S NSMI+ YVQ ++A
Sbjct: 267 F---DSLVNISTALVDMYAKCGSLETARQLFDGMLER-NVVSWNSMIDAYVQNENPKEAM 322
Query: 121 ELFDTV------PI---------------------------------RNKIAWTCMISGY 141
+F + P RN +IS Y
Sbjct: 323 LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
+V A +F + R ++W +MI G+ QN +A++ F +M + P T+
Sbjct: 383 CKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYV 442
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
+ A+ ++ + +HG+ +++ + ++ + +LV MYAKCG I + IF M+ R
Sbjct: 443 SVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER 502
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
+WN+MI G HG AL ++E M + + P+ VTFL V++AC+H+GLV+ G + F
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 381
M +Y ++ DHY ++++LLGRAG++ +A +F++++PV+P ++GA++G C + K
Sbjct: 563 YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK- 621
Query: 382 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
+ + A +A +RL EL+P + HV L NIY A ++ +R M +G+RK PGCS +
Sbjct: 622 NVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Query: 442 LVKGRVHVFSSGDRLEPHVEDI 463
+K VH F SG P + I
Sbjct: 682 EIKNEVHSFFSGSTAHPDSKKI 703
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 154/338 (45%), Gaps = 56/338 (16%)
Query: 50 RQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLN----S 105
RQ+ + NG + + + LV ++ +G +D A+ E D LN +
Sbjct: 54 RQILPLVFKNGLYQEHF---FQTKLVSLFCRYGSVDEAARVFEP-----IDSKLNVLYHT 105
Query: 106 MINGYVQAGQLEKAQELF------DTVPIRNKIAWTCMISG------------------- 140
M+ G+ + L+KA + F D P+ + + G
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 141 --------------YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFG 186
Y QV +A +FD MP+RD ++W ++++GY QN + A+ +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 187 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
M P T + A+ ++ + G+++HG +++ ++ + + +LV MYAKCG
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 247 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 306
++ + ++F M R+ +SWNSMI + EA+ +++ ML+ G+ P V+ +G L
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 307 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 344
ACA G +++G ++ ++ G D +S++N L
Sbjct: 346 ACADLGDLERG-----RFIHKLSVELGLDRNVSVVNSL 378
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 127/243 (52%), Gaps = 10/243 (4%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
T ++S + G V +A +F+ + + ++ + +M+ G+ + + +A+ F M
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P+ F L G A L G+++HG+ VK+ + DL L +MYAKC +++++ ++
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F M RD +SWN+++ G S +G A AL + ++M E L P +T + VL A + L+
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWG 370
G E ++ Y ++ GFD ++I +++ + G ++ A + + +E N W
Sbjct: 253 SVGKE-----IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWN 306
Query: 371 ALV 373
+++
Sbjct: 307 SMI 309
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 254/497 (51%), Gaps = 54/497 (10%)
Query: 14 ALLLFLQMTLSDSKPNGETFISLAYACAGL--SFPYLGRQLHAQLIVNGWKLDDYDGRLR 71
+ L + M + P+ TF L A L S P+ Q HA ++ G D D +R
Sbjct: 88 SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF---QFHAHIVKFGL---DSDPFVR 141
Query: 72 RSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ----ELFDTVP 127
SL+ YS GL D+AS +G + D + +MI+G+V+ G +A E+ T
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDK-DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGV 200
Query: 128 IRNKIAWTCMISG----------------YLSAGQVFKACDLF----------------- 154
N++ ++ YL G+V CD+F
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRV--KCDVFIGSSLVDMYGKCSCYDD 258
Query: 155 -----DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 209
D MP R+ + WT++I+GYVQ+ + + +F EM+ +P T + + A
Sbjct: 259 AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAH 318
Query: 210 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 269
V L +GR++H +K E + +L+ +Y KCG ++++ +F + ++ +W +M
Sbjct: 319 VGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAM 378
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 329
I G + HG A +A ++ TML + P+ VTF+ VL+ACAH GLV++G LF SM +
Sbjct: 379 INGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFN 438
Query: 330 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRA 389
++P DHY +++L GR G +++A+ + R+P+EP + +WGAL G C L K D ++ A
Sbjct: 439 MEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHK-DYELGKYA 497
Query: 390 TKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHV 449
R+++L P ++ + L N+Y+ + E+ +RK+M+ + V K+PG SWI VKG++
Sbjct: 498 ASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCE 557
Query: 450 FSSGDRLEPHVEDILLQ 466
F + D +P D L +
Sbjct: 558 FIAFDDKKPLESDDLYK 574
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 40/224 (17%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+ + +++ +L+F +M SD PN +T S+ ACA + + GR++H +I N
Sbjct: 277 LIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNS 336
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+++ G ++I+ YV+ G LE+A
Sbjct: 337 IEINTTAG-----------------------------------TTLIDLYVKCGCLEEAI 361
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNE 176
+F+ + +N WT MI+G+ + G A DLF +M + + + +++S
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGG 421
Query: 177 LIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
L+ E LF M P +A + G L++ + L
Sbjct: 422 LVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKAL 465
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 165 WTSMISGYVQNELIAEAISL--FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
W S+I + + +S + M +G P TF L A+ + Q H
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAH 128
Query: 223 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 282
VK + D + NSL+S Y+ G D + R+F +D ++W +MI G +G ASEA
Sbjct: 129 IVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEA 188
Query: 283 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG---FDHYI- 338
+ + M + G+ + +T + VL A AG V+ F V+ L+ G D +I
Sbjct: 189 MVYFVEMKKTGVAANEMTVVSVLKA---AGKVED--VRFGRSVHGLYLETGRVKCDVFIG 243
Query: 339 -SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
S++++ G+ DA++ +P N W AL+
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIA 279
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 150/505 (29%), Positives = 256/505 (50%), Gaps = 44/505 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+A NG EAL +F M L+ + + +F S+ CA L QLH ++ G
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALE--GNLNNFDDQSLNSMINGYVQAGQLEK 118
+ +D +R +L+ YS M A + G + N S +MI+G++Q E+
Sbjct: 326 FL---FDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV--VSWTAMISGFLQNDGKEE 380
Query: 119 AQELFD-------------------TVPI----------------RNKIAWTCMISGYLS 143
A +LF +P+ R+ T ++ Y+
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 144 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 203
G+V +A +F + D+D +AW++M++GY Q AI +FGE+ G P TF+ +
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSI 500
Query: 204 FGAMGSV-AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 262
+ A + QG+Q HG +K+ + L + ++L++MYAK G I+ + +F +D
Sbjct: 501 LNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKD 560
Query: 263 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
+SWNSMI G + HG+A +AL V++ M + + D VTF+GV AC HAGLV++G + F+
Sbjct: 561 LVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFD 620
Query: 323 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 382
MV + P +H +++L RAG+++ A + + +P IW ++ C + K
Sbjct: 621 IMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK-K 679
Query: 383 ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL 442
++ A ++++ + P ++ +V L N+YA + E +RK M + V+K PG SWI
Sbjct: 680 TELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 739
Query: 443 VKGRVHVFSSGDRLEPHVEDILLQI 467
VK + + F +GDR P + I +++
Sbjct: 740 VKNKTYSFLAGDRSHPLKDQIYMKL 764
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
T ++ Y+ +FD M +R+ + WT++ISGY +N + E ++LF M G
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P + TFA G + +G Q+H + VK + + + NSL+++Y KCG + + +
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 310
F + ++WNSMI G + +G EAL ++ +M + +F V+ CA+
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 151/365 (41%), Gaps = 49/365 (13%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ GF+ +G +EA LFL + + + F S+ A L GRQLH Q I G
Sbjct: 64 LLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFG 123
Query: 61 WKLDDYDGRLRRSLVRMY----------SVFGLMDYASNALEGNL------NNFDDQSLN 104
+ LDD + SLV Y VF M + L N+ +D+ L
Sbjct: 124 F-LDDVS--VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLT 180
Query: 105 ---SMINGYVQAGQLEKAQEL--------------FDTVPIRNKIAWTCMISG-----YL 142
M N Q A L TV ++N + T +S YL
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 143 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
G V KA LFD + + W SMISGY N L EA+ +F M + +FA
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM-AYR 261
+ ++ L QLH VK + +D + +L+ Y+KC + D+ R+F +
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC-------AHAGLV 314
+ +SW +MI G + EA+ ++ M G+ P+ T+ +LTA HA +V
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420
Query: 315 DKGWE 319
+E
Sbjct: 421 KTNYE 425
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
G +S+ +++ A +LFD P RD ++ S++ G+ ++ EA LF + G
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
F+ + ++ GRQLH +K + D+ + SLV Y K D ++F M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
R+ ++W ++I G + + E LT++ M G P++ TF L A G+ +G +
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 353
+ +V + GL S+INL + G V+ A
Sbjct: 216 VHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKA 248
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 246/448 (54%), Gaps = 13/448 (2%)
Query: 28 PNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYA 87
P+ +F + A G Q+H Q + +G + + G +L+ MY G +++A
Sbjct: 104 PDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGT---TLIGMYGGCGCVEFA 160
Query: 88 SNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQV 147
+ ++ + + N++I + + A+E+FD + +RN +W M++GY+ AG++
Sbjct: 161 RKVFD-EMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGEL 219
Query: 148 FKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 207
A +F MP RD ++W++MI G N E+ F E+ G SP + + A
Sbjct: 220 ESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSAC 279
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISW 266
+ G+ LHG K Y + + + N+L+ MY++CG + + +F M R +SW
Sbjct: 280 SQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSW 339
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
SMI GL+ HG+ EA+ ++ M +G+ PD ++F+ +L AC+HAGL+++G + F+ M
Sbjct: 340 TSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKR 399
Query: 327 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVA 386
Y ++P +HY +++L GR+GK++ A +F+ ++P+ P +W L+G C S + ++A
Sbjct: 400 VYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACS-SHGNIELA 458
Query: 387 SRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGR 446
+ +RL ELDP N+ V L N YA + ++ S+RK M ++ ++K S + V
Sbjct: 459 EQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKT 518
Query: 447 VHVFSSGDR-----LEPH--VEDILLQI 467
++ F++G++ +E H +++I+L++
Sbjct: 519 MYKFTAGEKKKGIDIEAHEKLKEIILRL 546
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Query: 158 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAYLDQG 216
P+ D+ + +++ GY +++ ++++F EMM GF P + +FA + A+ + L G
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 217 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 276
Q+H +K E L + +L+ MY CG ++ + ++F M + ++WN++I
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 277 GRASEALTVYETML 290
+ A +++ ML
Sbjct: 186 NDVAGAREIFDKML 199
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 255/503 (50%), Gaps = 47/503 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ EE++ +FL+ L KP+ T S+ AC L L + ++ ++ G
Sbjct: 279 MICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ L+ +R L+ +Y+ G M A + ++ D S NS+I+GY+Q+G L +A
Sbjct: 338 FVLE---STVRNILIDVYAKCGDMITARDVF-NSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 121 ELFDTVPIRNKIA---------------------------------------WTCMISGY 141
+LF + I + A +I Y
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G+V + +F SM D++ W ++IS V+ A + + +M P TF
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
V S+A G+++H ++ YE +L + N+L+ MY+KCG +++S R+F M+ R
Sbjct: 514 VTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR 573
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
D ++W MI +G +AL + M + G+ PD+V F+ ++ AC+H+GLVD+G F
Sbjct: 574 DVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACF 633
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 381
M Y + P +HY +++LL R+ K+ AEEF+ +P++P+ +IW +++ C S
Sbjct: 634 EKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTS-G 692
Query: 382 DADVASRATKRLLELDPLNAPGHVALC-NIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
D + A R ++R++EL+P + PG+ L N YAA + +++ +RK ++ K + K PG SW
Sbjct: 693 DMETAERVSRRIIELNP-DDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSW 751
Query: 441 ILVKGRVHVFSSGDRLEPHVEDI 463
I V VHVFSSGD P E I
Sbjct: 752 IEVGKNVHVFSSGDDSAPQSEAI 774
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 192/419 (45%), Gaps = 54/419 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I F+ NG + EAL + ++ S P+ TF S+ ACAGL +G ++ Q++ G
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ D + G +LV MYS GL+ A + + D S NS+I+GY G E+A
Sbjct: 137 FESDLFVGN---ALVDMYSRMGLLTRARQVFD-EMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 121 ELFDTVPIRNKIAWTC-------------------------------------------M 137
E++ + K +W +
Sbjct: 193 EIYHEL----KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 138 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
++ YL + A +FD M RDS+++ +MI GY++ E++ E++ +F E + F P
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDL 307
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 257
T + + A G + L + ++ +K + + + N L+ +YAKCG++ + +F++
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
M +D +SWNS+I G G EA+ +++ M+ D +T+L +++ + G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 318 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 376
L ++ + S G+ ++I++ + G+V D+ + + + W ++ C
Sbjct: 428 KGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISAC 484
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%)
Query: 158 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 217
P ++ W S+I + +N L EA+ +G++ SP TF + A + + G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 277
++ + +E DL + N+LV MY++ G + + ++F M RD +SWNS+I G S HG
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 278 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
EAL +Y + + PD+ T VL A + +V +G
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 232/465 (49%), Gaps = 38/465 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDS--KPNGETFISLAYACAGLSFPYLGRQLHAQLIV 58
+I GF+ + F E A+ +F+ M S KP T+ S+ A L GRQLH +I
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 59 NGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEK 118
G + D S +R N+M++ YV G L +
Sbjct: 155 EGLEDD--------SFIR---------------------------NTMLHMYVTCGCLIE 179
Query: 119 AQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELI 178
A +F + + +AW MI G+ G + +A +LFD MP R+ ++W SMISG+V+N
Sbjct: 180 AWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRF 239
Query: 179 AEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSL 238
+A+ +F EM P T L A + +QGR +H V+ +E + I+ +L
Sbjct: 240 KDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTAL 299
Query: 239 VSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDT 298
+ MY KCG I++ +F + WNSMI+GL+++G A+ ++ + GL PD+
Sbjct: 300 IDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDS 359
Query: 299 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 358
V+F+GVLTACAH+G V + E F M Y ++P HY ++N+LG AG +++AE +
Sbjct: 360 VSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIK 419
Query: 359 RLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHI 418
+PVE + IW +L+ C + ++A RA K L +LDP G+V L N YA+
Sbjct: 420 NMPVEEDTVIWSSLLSACR-KIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFE 478
Query: 419 ELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
E R M+ + + K GCS I V VH F S P +I
Sbjct: 479 EAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEI 523
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 148/343 (43%), Gaps = 51/343 (14%)
Query: 124 DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS 183
DTV +A+ C S + A +F + ++ W ++I G+ ++ AIS
Sbjct: 56 DTVTASRVLAFCCA-----SPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAIS 110
Query: 184 LFGEMMAHGFS--PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 241
+F +M+ S P T+ +F A G + GRQLHGM +K E D + N+++ M
Sbjct: 111 IFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHM 170
Query: 242 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD-------------------------- 275
Y CG + +++RIF M D ++WNSMIMG +
Sbjct: 171 YVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMI 230
Query: 276 -----HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYG 329
+GR +AL ++ M E + PD T + +L ACA+ G ++G W ++ Y
Sbjct: 231 SGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW------IHEYI 284
Query: 330 LQPGFD-HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI--WGALV-GVC--GLSKTDA 383
++ F+ + I + L+ K EE + P + W +++ G+ G +
Sbjct: 285 VRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAM 344
Query: 384 DVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKE 426
D+ S + LE D ++ G + C R E L KE
Sbjct: 345 DLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKE 387
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 246/466 (52%), Gaps = 40/466 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I GF+ + E+++ +++QM P+ T+ L + + LS LG LH ++ +G
Sbjct: 79 VIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG 138
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D + + +L+ MY +F DQ+ A+
Sbjct: 139 LEWDLF---ICNTLIHMY-----------------GSFRDQA---------------SAR 163
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+LFD +P +N + W ++ Y +G V A +FD M +RD + W+SMI GYV+ +
Sbjct: 164 KLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNK 223
Query: 181 AISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
A+ +F +MM G S N T + A + L++G+ +H + +IL+ SL+
Sbjct: 224 ALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLI 283
Query: 240 SMYAKCGEIDDSYRIFSNMAYR--DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 297
MYAKCG I D++ +F + + D + WN++I GL+ HG E+L ++ M E + PD
Sbjct: 284 DMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPD 343
Query: 298 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 357
+TFL +L AC+H GLV + W F S+ S G +P +HY ++++L RAG VKDA +F+
Sbjct: 344 EITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFI 402
Query: 358 LRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRH 417
+P++P ++ GAL+ C ++ + ++A K+L+EL P N +V L N+YA N +
Sbjct: 403 SEMPIKPTGSMLGALLNGC-INHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQF 461
Query: 418 IELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
S+R+ M KGV+K G S + + G H F + D+ H + I
Sbjct: 462 RAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKI 507
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 34/276 (12%)
Query: 132 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 191
++ T S S+G V A + D + W +I G+ + ++IS++ +M+
Sbjct: 43 VSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF 102
Query: 192 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 251
G P + T+ L + ++ G LH VK+ E+DL + N+L+ MY + +
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 252 YRIFSNMAYRDKISWN-------------------------------SMIMGLSDHGRAS 280
++F M +++ ++WN SMI G G +
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 222
Query: 281 EALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 339
+AL +++ M+ G + VT + V+ ACAH G +++G + +++ + L S
Sbjct: 223 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH-LPLTVILQTS 281
Query: 340 IINLLGRAGKVKDAEEFVLRLPVEPNHAI-WGALVG 374
+I++ + G + DA R V+ A+ W A++G
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 190/327 (58%), Gaps = 1/327 (0%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y +G + A LF S+ RD I W +MISGYVQ L E + ++ +M + P TF
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
A +F A ++ L+ G++ H + +K + ++I++++LV MY KC D +R+F ++
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
R+ I+W S+I G HG+ SE L +E M E G P+ VTFL VLTAC H GLVDKGWE
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
F SM YG++P HY ++++ LGRAG++++A EFV++ P + + +WG+L+G C +
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIH- 391
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
+ + A + LELDP N +V N YA+ + +R++M GV+K PG S
Sbjct: 392 GNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQ 451
Query: 441 ILVKGRVHVFSSGDRLEPHVEDILLQI 467
I ++G VH F D E I ++
Sbjct: 452 IELQGEVHRFMKDDTSHRLSEKIYKKV 478
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 113/288 (39%), Gaps = 45/288 (15%)
Query: 31 ETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNA 90
ET+ L C G+++HAQ+ V G+ L++Y L+ L+ +Y++ G + A
Sbjct: 109 ETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEY---LKVKLLILYALSGDLQTA-GI 164
Query: 91 LEGNLNNFDDQSLNSMINGYVQAG-----------------------------------Q 115
L +L D N+MI+GYVQ G +
Sbjct: 165 LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDR 224
Query: 116 LEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISG 171
LE + + R N I + ++ Y +FD + R+ I WTS+ISG
Sbjct: 225 LEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISG 284
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG-RQLHGMQVKTIYEY 230
Y + ++E + F +M G P TF V+ A +D+G + M+ E
Sbjct: 285 YGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEP 344
Query: 231 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHG 277
+ ++V + G + ++Y ++ W S++ HG
Sbjct: 345 EGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 3/173 (1%)
Query: 154 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
F R + + G + EA+ L + + G T+AVL
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 273
+G+++H + + L+ L+ +YA G++ + +F ++ RD I WN+MI G
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 274 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
G E L +Y M + + PD TF V AC+ ++ G M+
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIK 237
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 212/368 (57%), Gaps = 4/368 (1%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
D ++I Y + G L A+ +FD + R+ W MI+GY G + A +LFDSMP
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGR 217
++ +WT++ISG+ QN +EA+ +F M P + T + A ++ L+ GR
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDH 276
+L G + + ++ + N+ + MY+KCG ID + R+F + R+ SWNSMI L+ H
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 277 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 336
G+ EALT++ ML G PD VTF+G+L AC H G+V KG ELF SM + + P +H
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 337 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 396
Y +I+LLGR GK+++A + + +P++P+ +WG L+G C + ++A A++ L +L
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFH-GNVEIAEIASEALFKL 414
Query: 397 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKG-RVHVFSSGDR 455
+P N V + NIYAAN++ + +RK M+ + + KA G S+ + G VH F+ D+
Sbjct: 415 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 474
Query: 456 LEPHVEDI 463
P +I
Sbjct: 475 SHPRSYEI 482
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 41/261 (15%)
Query: 150 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 209
A LFD + + + +I Y + E+I L+ + G P + TF +F A S
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 210 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 269
+ R LH ++ +E D +L++ YAK G + + R+F M+ RD WN+M
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 270 IM-------------------------------GLSDHGRASEALTVYETM-LEFGLYPD 297
I G S +G SEAL ++ M + + P+
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 298 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN----LLGRAGKVKDA 353
+T + VL ACA+ G ++ G L Y + GF I + N + + G + A
Sbjct: 215 HITVVSVLPACANLGELEIGRRL-----EGYARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 354 EEFVLRLPVEPNHAIWGALVG 374
+ L + N W +++G
Sbjct: 270 KRLFEELGNQRNLCSWNSMIG 290
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 45/211 (21%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDS-KPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
+I GF+ NG Y EAL +FL M S KPN T +S+ ACA L +GR+L N
Sbjct: 185 VISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAREN 244
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGY--------- 110
G+ + Y + + + MYS G++D A E N + S NSMI
Sbjct: 245 GFFDNIY---VCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEA 301
Query: 111 --------------------------VQAGQLEKAQELFDTVPIRNKIA-----WTCMIS 139
V G + K QELF ++ +KI+ + CMI
Sbjct: 302 LTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMID 361
Query: 140 GYLSAGQVFKACDLFDSMPDR-DSIAWTSMI 169
G++ +A DL +MP + D++ W +++
Sbjct: 362 LLGRVGKLQEAYDLIKTMPMKPDAVVWGTLL 392
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 194/333 (58%), Gaps = 1/333 (0%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+ +I Y + A +FD M ++ ++WT+M+ GY Q EA+ +F +M G
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P + T A +V+ L++G Q HG + + + + + NSLV++Y KCG+IDDS R+
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F+ M RD +SW +M+ + GRA E + +++ M++ GL PD VT GV++AC+ AGLV
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+KG F M + YG+ P HY +I+L R+G++++A F+ +P P+ W L+
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 434
C +K + ++ A + L+ELDP + G+ L +IYA+ + + LR+ MR K V+K
Sbjct: 549 AC-RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKK 607
Query: 435 APGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
PG SWI KG++H FS+ D P+++ I ++
Sbjct: 608 EPGQSWIKWKGKLHSFSADDESSPYLDQIYAKL 640
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 136/268 (50%), Gaps = 11/268 (4%)
Query: 110 YVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMI 169
Y G + A+++F + RN + + ++ G L+ G + A LF M ++DS++W +MI
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMI 242
Query: 170 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 229
G QN L EAI F EM G F + A G + +++G+Q+H ++T ++
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 230 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 289
+ + ++L+ MY KC + + +F M ++ +SW +M++G GRA EA+ ++ M
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 290 LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLG 345
G+ PD T ++ACA+ +++G + + S G HY+ S++ L G
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS-----GLIHYVTVSNSLVTLYG 417
Query: 346 RAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ G + D+ + V + W A+V
Sbjct: 418 KCGDIDDSTRLFNEMNVR-DAVSWTAMV 444
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 33/256 (12%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N++++ Y A+ +FD +P N +W ++ Y AG + + F+ +PDRD +
Sbjct: 45 NNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGV 104
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGM 222
W +I GY + L+ A+ + MM + L T + S ++ G+Q+HG
Sbjct: 105 TWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQ 164
Query: 223 QVKTIYEYDLILENSLVSMYAK-------------------------------CGEIDDS 251
+K +E L++ + L+ MYA CG I+D+
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDA 224
Query: 252 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
++F M +D +SW +MI GL+ +G A EA+ + M GL D F VL AC
Sbjct: 225 LQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGL 283
Query: 312 GLVDKGWELFNSMVNS 327
G +++G ++ ++ +
Sbjct: 284 GAINEGKQIHACIIRT 299
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 147/352 (41%), Gaps = 52/352 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G A NG +EA+ F +M + K + F S+ AC GL G+Q+HA +I
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ Y G +L+ MY + YA + + + S +M+ GY Q G+ E+A
Sbjct: 301 FQDHIYVG---SALIDMYCKCKCLHYAKTVFD-RMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 121 ELF----------DTVPIRNKIAWTCMISG-----------------------------Y 141
++F D + I+ +S Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G + + LF+ M RD+++WT+M+S Y Q E I LF +M+ HG P T
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE----NSLVSMYAKCGEIDDSYRIFSN 257
+ A +++G++ + EY ++ + ++ ++++ G ++++ R +
Sbjct: 477 GVISACSRAGLVEKGQRYFKLMTS---EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING 533
Query: 258 MAY-RDKISWNSMIMGLSDHGRASEALTVYETMLEFGL-YPDTVTFLGVLTA 307
M + D I W +++ + G E+++E +P T L + A
Sbjct: 534 MPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 243/464 (52%), Gaps = 42/464 (9%)
Query: 2 IGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGW 61
I + NG ++A LL++Q+ S+ PN TF SL +C+ S G+ +H ++ G
Sbjct: 102 INTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGL 157
Query: 62 KLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQE 121
+D Y GL+D Y + G + AQ+
Sbjct: 158 GIDPYVAT------------GLVDV-----------------------YAKGGDVVSAQK 182
Query: 122 LFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 181
+FD +P R+ ++ T MI+ Y G V A LFDSM +RD ++W MI GY Q+ +A
Sbjct: 183 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 242
Query: 182 ISLFGEMMAHGF-SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
+ LF +++A G P T A + L+ GR +H + ++ + L+
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLID 302
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTV 299
MY+KCG ++++ +F++ +D ++WN+MI G + HG + +AL ++ M GL P +
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
TF+G L ACAHAGLV++G +F SM YG++P +HY +++LLGRAG++K A E +
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 422
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 419
+ ++ + +W +++G C L D + + L+ L+ N+ +V L NIYA+ +
Sbjct: 423 MNMDADSVLWSSVLGSCKL-HGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEG 481
Query: 420 LTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
+ +R M+ KG+ K PG S I ++ +VH F +GDR ++I
Sbjct: 482 VAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEI 525
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 44/270 (16%)
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y S G++ + LF D D +T+ I+ N L +A L+ ++++ +P T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI----- 254
F+ L + + G+ +H +K D + LV +YAK G++ + ++
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 255 --------------------------FSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 288
F +M RD +SWN MI G + HG ++AL +++
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 289 MLEFGL-YPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGFDHYISIINLLGR 346
+L G PD +T + L+AC+ G ++ G W + V S ++ +I++ +
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRW--IHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 347 AGKVKDAEEFVLRLPVEPNHAI--WGALVG 374
G + EE VL P I W A++
Sbjct: 307 CGSL---EEAVLVFNDTPRKDIVAWNAMIA 333
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 147/507 (28%), Positives = 246/507 (48%), Gaps = 45/507 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ F +G +AL L M S N TF S AC F GR LH ++V+G
Sbjct: 316 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 375
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
Y+ + +LV MY G M + L + D + N++I GY + +KA
Sbjct: 376 LF---YNQIIGNALVSMYGKIGEMSESRRVLL-QMPRRDVVAWNALIGGYAEDEDPDKAL 431
Query: 121 ELFDTVPIRN---------KIAWTCMISG------------------------------- 140
F T+ + + C++ G
Sbjct: 432 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITM 491
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y G + + DLF+ + +R+ I W +M++ + E + L +M + G S +F
Sbjct: 492 YAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSF 551
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ A +A L++G+QLHG+ VK +E+D + N+ MY+KCGEI + ++
Sbjct: 552 SEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 611
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
R SWN +I L HG E + MLE G+ P VTF+ +LTAC+H GLVDKG
Sbjct: 612 RSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAY 671
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
++ + +GL+P +H I +I+LLGR+G++ +AE F+ ++P++PN +W +L+ C +
Sbjct: 672 YDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKI-H 730
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
+ D +A + L +L+P + +V N++A R ++ ++RK+M K ++K CSW
Sbjct: 731 GNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSW 790
Query: 441 ILVKGRVHVFSSGDRLEPHVEDILLQI 467
+ +K +V F GDR P +I ++
Sbjct: 791 VKLKDKVSSFGIGDRTHPQTMEIYAKL 817
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 184/397 (46%), Gaps = 53/397 (13%)
Query: 4 GFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKL 63
G++ G EE + ++ M N + + +C L LGRQ+ Q++ +G
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL-- 174
Query: 64 DDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF 123
+ + SL+ M G +DYA N + ++ D S NS+ Y Q G +E++ +F
Sbjct: 175 -ESKLAVENSLISMLGSMGNVDYA-NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232
Query: 124 D------------TVPIR-------------------------NKIAWTC--MISGYLSA 144
TV + + C ++ Y A
Sbjct: 233 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
G+ +A +F MP +D I+W S+++ +V + +A+ L M++ G S TF
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 352
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
A + + ++GR LHG+ V + Y+ I+ N+LVSMY K GE+ +S R+ M RD +
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 412
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG-LVDKGWELFNS 323
+WN++I G ++ +AL ++TM G+ + +T + VL+AC G L+++G L
Sbjct: 413 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL--- 469
Query: 324 MVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEF 356
++Y + GF D ++ S+I + + G + +++
Sbjct: 470 --HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 504
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 190/417 (45%), Gaps = 52/417 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYAC--AGLSFPYLGRQLHAQLIV 58
M+ G G Y E + F +M KP+ SL AC +G F G Q+H +
Sbjct: 12 MMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE-GVQVHGFVAK 70
Query: 59 NGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEK 118
+G D Y + +++ +Y V+GL+ + E + + + S S++ GY G+ E+
Sbjct: 71 SGLLSDVY---VSTAILHLYGVYGLVSCSRKVFE-EMPDRNVVSWTSLMVGYSDKGEPEE 126
Query: 119 AQELFDTVP--------------------------------------IRNKIA-WTCMIS 139
+++ + + +K+A +IS
Sbjct: 127 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 186
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
S G V A +FD M +RD+I+W S+ + Y QN I E+ +F M + T
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ L +G V + GR +HG+ VK ++ + + N+L+ MYA G ++ +F M
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
+D ISWNS++ + GR+ +AL + +M+ G + VTF L AC +KG
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-R 365
Query: 320 LFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+ + +V GL ++ I +++++ G+ G++ ++ +L++P + W AL+G
Sbjct: 366 ILHGLVVVSGLF--YNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 419
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 3/217 (1%)
Query: 157 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMG-SVAYLDQ 215
MP R+ ++W +M+SG V+ L E + F +M G P + A L A G S + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 275
G Q+HG K+ D+ + +++ +Y G + S ++F M R+ +SW S+++G SD
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 335
G E + +Y+ M G+ + + V+++C G ++ +V S GL+
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLA 179
Query: 336 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
S+I++LG G V D ++ E + W ++
Sbjct: 180 VENSLISMLGSMGNV-DYANYIFDQMSERDTISWNSI 215
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 147/507 (28%), Positives = 246/507 (48%), Gaps = 45/507 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ F +G +AL L M S N TF S AC F GR LH ++V+G
Sbjct: 333 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 392
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
Y+ + +LV MY G M + L + D + N++I GY + +KA
Sbjct: 393 LF---YNQIIGNALVSMYGKIGEMSESRRVLL-QMPRRDVVAWNALIGGYAEDEDPDKAL 448
Query: 121 ELFDTVPIRN---------KIAWTCMISG------------------------------- 140
F T+ + + C++ G
Sbjct: 449 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITM 508
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y G + + DLF+ + +R+ I W +M++ + E + L +M + G S +F
Sbjct: 509 YAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSF 568
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ A +A L++G+QLHG+ VK +E+D + N+ MY+KCGEI + ++
Sbjct: 569 SEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVN 628
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
R SWN +I L HG E + MLE G+ P VTF+ +LTAC+H GLVDKG
Sbjct: 629 RSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAY 688
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
++ + +GL+P +H I +I+LLGR+G++ +AE F+ ++P++PN +W +L+ C +
Sbjct: 689 YDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKI-H 747
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
+ D +A + L +L+P + +V N++A R ++ ++RK+M K ++K CSW
Sbjct: 748 GNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSW 807
Query: 441 ILVKGRVHVFSSGDRLEPHVEDILLQI 467
+ +K +V F GDR P +I ++
Sbjct: 808 VKLKDKVSSFGIGDRTHPQTMEIYAKL 834
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 184/397 (46%), Gaps = 53/397 (13%)
Query: 4 GFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKL 63
G++ G EE + ++ M N + + +C L LGRQ+ Q++ +G
Sbjct: 134 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL-- 191
Query: 64 DDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF 123
+ + SL+ M G +DYA N + ++ D S NS+ Y Q G +E++ +F
Sbjct: 192 -ESKLAVENSLISMLGSMGNVDYA-NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249
Query: 124 D------------TVPIR-------------------------NKIAWTC--MISGYLSA 144
TV + + C ++ Y A
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 309
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
G+ +A +F MP +D I+W S+++ +V + +A+ L M++ G S TF
Sbjct: 310 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 369
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
A + + ++GR LHG+ V + Y+ I+ N+LVSMY K GE+ +S R+ M RD +
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 429
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG-LVDKGWELFNS 323
+WN++I G ++ +AL ++TM G+ + +T + VL+AC G L+++G L
Sbjct: 430 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL--- 486
Query: 324 MVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEF 356
++Y + GF D ++ S+I + + G + +++
Sbjct: 487 --HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 521
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 190/417 (45%), Gaps = 52/417 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYAC--AGLSFPYLGRQLHAQLIV 58
M+ G G Y E + F +M KP+ SL AC +G F G Q+H +
Sbjct: 29 MMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE-GVQVHGFVAK 87
Query: 59 NGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEK 118
+G D Y + +++ +Y V+GL+ + E + + + S S++ GY G+ E+
Sbjct: 88 SGLLSDVY---VSTAILHLYGVYGLVSCSRKVFE-EMPDRNVVSWTSLMVGYSDKGEPEE 143
Query: 119 AQELFDTVP--------------------------------------IRNKIA-WTCMIS 139
+++ + + +K+A +IS
Sbjct: 144 VIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLIS 203
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
S G V A +FD M +RD+I+W S+ + Y QN I E+ +F M + T
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 263
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ L +G V + GR +HG+ VK ++ + + N+L+ MYA G ++ +F M
Sbjct: 264 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
+D ISWNS++ + GR+ +AL + +M+ G + VTF L AC +KG
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-R 382
Query: 320 LFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+ + +V GL ++ I +++++ G+ G++ ++ +L++P + W AL+G
Sbjct: 383 ILHGLVVVSGLF--YNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 436
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y G+V A LFD MP R+ ++W +M+SG V+ L E + F +M G P +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 201 AVLFGAMG-SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
A L A G S + +G Q+HG K+ D+ + +++ +Y G + S ++F M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
R+ +SW S+++G SD G E + +Y+ M G+ + + V+++C G +
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
+ +V S GL+ S+I++LG G V D ++ E + W ++
Sbjct: 182 IIGQVVKS-GLESKLAVENSLISMLGSMGNV-DYANYIFDQMSERDTISWNSI 232
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MY K G + + +F M R+++SWN+M+ G+ G E + + M + G+ P +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVL 358
++TAC +G + + + V GL D Y+S I++L G G V + +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLS--DVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 359 RLPVEPNHAIWGALV 373
+P + N W +L+
Sbjct: 119 EMP-DRNVVSWTSLM 132
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 247/503 (49%), Gaps = 45/503 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ +G EE+L F +M S P+ TF SL + + +Q+H ++ +
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
LD + L +L+ Y + A N N+ D +MI+GY+ G +
Sbjct: 371 ISLDIF---LTSALIDAYFKCRGVSMAQNIF-SQCNSVDVVVFTAMISGYLHNGLYIDSL 426
Query: 121 ELF----------------DTVPI----------------------RNKIAWTC-MISGY 141
E+F +P+ N+ C +I Y
Sbjct: 427 EMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMY 486
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G++ A ++F+ + RD ++W SMI+ Q++ + AI +F +M G + +
Sbjct: 487 AKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSIS 546
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
A ++ G+ +HG +K D+ E++L+ MYAKCG + + +F M +
Sbjct: 547 AALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLE-FGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
+ +SWNS+I +HG+ ++L ++ M+E G+ PD +TFL ++++C H G VD+G
Sbjct: 607 NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRF 666
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
F SM YG+QP +HY +++L GRAG++ +A E V +P P+ +WG L+G C L K
Sbjct: 667 FRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHK 726
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
+ ++A A+ +L++LDP N+ +V + N +A +T +R M+ + V+K PG SW
Sbjct: 727 -NVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSW 785
Query: 441 ILVKGRVHVFSSGDRLEPHVEDI 463
I + R H+F SGD P I
Sbjct: 786 IEINKRTHLFVSGDVNHPESSHI 808
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 140/313 (44%), Gaps = 45/313 (14%)
Query: 36 LAYACAGLSFPYLGRQLHAQLIVNGWKLDDY-DGRLRRSLVRMYSVFG-LMDYASNALEG 93
L AC+ + G+Q+HA LIVN D Y D R+ + MY++ G D
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERI----LGMYAMCGSFSDCGKMFYRL 96
Query: 94 NLNNFDDQSLNSMINGYVQAGQLEKAQELF------------------------------ 123
+L + NS+I+ +V+ G L +A +
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 124 -----DTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ 174
DTV N+ + +I YL G++ LFD + +D + W M++GY +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 175 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 234
+ I F M SP TF + S +D G QLHG+ V + +++ +
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 235 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
+NSL+SMY+KCG DD+ ++F M+ D ++WN MI G G E+LT + M+ G+
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 295 YPDTVTFLGVLTA 307
PD +TF +L +
Sbjct: 337 LPDAITFSSLLPS 349
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 182/423 (43%), Gaps = 55/423 (13%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN- 59
+I F NG +AL + +M P+ TF L AC L + G + + +
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK-NFKGIDFLSDTVSSL 167
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
G +++ + SL++ Y +G +D S + L D N M+NGY + G L+
Sbjct: 168 GMDCNEF---VASSLIKAYLEYGKIDVPSKLFDRVLQK-DCVIWNVMLNGYAKCGALDSV 223
Query: 120 QELFDTVPI----RNKIAWTC-----------------------------------MISG 140
+ F + + N + + C ++S
Sbjct: 224 IKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y G+ A LF M D++ W MISGYVQ+ L+ E+++ F EM++ G P TF
Sbjct: 284 YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITF 343
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ L ++ L+ +Q+H ++ D+ L ++L+ Y KC + + IFS
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS 403
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
D + + +MI G +G ++L ++ +++ + P+ +T + +L + G EL
Sbjct: 404 VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGREL 463
Query: 321 FNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 376
+ + ++ GFD+ +I I++ + G++ A E RL + + W +++ C
Sbjct: 464 -----HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Query: 377 GLS 379
S
Sbjct: 518 AQS 520
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 18/244 (7%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSI-AWTSMISGYVQNELIAEAISLFGEMMAHGFSP 195
M + G++F DL R SI W S+IS +V+N L+ +A++ + +M+ G SP
Sbjct: 82 MCGSFSDCGKMFYRLDL-----RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP 136
Query: 196 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI-YEYDLILENSLVSMYAKCGEIDDSYRI 254
TF L A ++ +G V ++ + + + +SL+ Y + G+ID ++
Sbjct: 137 DVSTFPCLVKACVALKNF-KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL 195
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F + +D + WN M+ G + G + + M + P+ VTF VL+ CA L+
Sbjct: 196 FDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLI 255
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWG 370
D G +L +V S G D SI N L + G+ DA + + R+ + W
Sbjct: 256 DLGVQLHGLVVVS-----GVDFEGSIKNSLLSMYSKCGRFDDASK-LFRMMSRADTVTWN 309
Query: 371 ALVG 374
++
Sbjct: 310 CMIS 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
++L A + L QG+Q+H + D + ++ MYA CG D ++F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 260 YRDKI--SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
R WNS+I +G ++AL Y ML FG+ PD TF ++ AC A KG
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV-ALKNFKG 156
Query: 318 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVC 376
+ + V+S G+ S+I GK+ + R+ ++ + IW ++ G
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLNGYA 215
Query: 377 GLSKTDADVASRATKRLLELDP 398
D+ + + R+ ++ P
Sbjct: 216 KCGALDSVIKGFSVMRMDQISP 237
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/499 (29%), Positives = 248/499 (49%), Gaps = 51/499 (10%)
Query: 9 GFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDG 68
GF EA+ FL M LS + + T S+ ACA L LG+QLH+ I +G +DD +
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL-VDDVEC 306
Query: 69 RLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNS---MINGYVQAGQL-EKAQELFD 124
SLV MY+ D + + + +D S+ S +I GY++ L +A LF
Sbjct: 307 ----SLVDMYAKCS-ADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 125 TVPIR----------------------------------------NKIAWTCMISGYLSA 144
+ + N +IS ++ +
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
++ A F+S+ +++ +++ + + G +N +A L E+ TFA L
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
+ +V + +G Q+H VK + + N+L+SMY+KCG ID + R+F+ M R+ I
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
SW SMI G + HG A L + M+E G+ P+ VT++ +L+AC+H GLV +GW FNSM
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 384
+ ++P +HY +++LL RAG + DA EF+ +P + + +W +G C + ++ +
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRV-HSNTE 660
Query: 385 VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK 444
+ A +++LELDP ++ L NIYA + E T +R++M+ + + K GCSWI V
Sbjct: 661 LGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVG 720
Query: 445 GRVHVFSSGDRLEPHVEDI 463
++H F GD P+ I
Sbjct: 721 DKIHKFYVGDTAHPNAHQI 739
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 161/373 (43%), Gaps = 56/373 (15%)
Query: 32 TFISLAYACAGLSFPYLGRQLHAQLIVNGWKLD-DYDGRLRRSLVRMYSVFGLMDYASNA 90
TF SL +C LG+ +HA+LI + D + D L SL+ +YS G A +
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLI----EFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 91 LEG--NLNNFDDQSLNSMINGYVQAGQLEKAQELF----DTVPIRNKIAWT-----CMIS 139
E D S ++M+ Y G+ A ++F + + N +T C S
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 140 GYLSAGQV----------FKA-----CDL-----------------FDSMPDRDSIAWTS 167
++ G+V F++ C L FD M + + + WT
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 168 MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI 227
MI+ +Q EAI F +M+ GF T + +F A + L G+QLH +++
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 228 YEYDLILENSLVSMYAKC---GEIDDSYRIFSNMAYRDKISWNSMIMG-LSDHGRASEAL 283
D +E SLV MYAKC G +DD ++F M +SW ++I G + + A+EA+
Sbjct: 300 LVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 284 TVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 342
++ M+ G + P+ TF AC + G ++ GL S+I+
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVIS 416
Query: 343 LLGRAGKVKDAEE 355
+ ++ +++DA+
Sbjct: 417 MFVKSDRMEDAQR 429
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 143/294 (48%), Gaps = 30/294 (10%)
Query: 99 DDQSLNSMINGYVQA-----GQLEKAQEL-FDTVPIRNKIAWTCMISGYLSAGQVFKACD 152
D + +S++ ++A G+L A+ + FD P + + + +IS Y +G KA D
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP--DSVLYNSLISLYSKSGDSAKAED 118
Query: 153 LFDSMP---DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 209
+F++M RD ++W++M++ Y N +AI +F E + G P + + + A +
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 210 VAYLDQGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGE--IDDSYRIFSNMAYRDKISW 266
++ GR G +KT +E D+ + SL+ M+ K GE +++Y++F M+ + ++W
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTW 237
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
MI G EA+ + M+ G D T V +ACA + G +L +
Sbjct: 238 TLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL-----H 292
Query: 327 SYGLQPGF--DHYISIINLLGRA---GKVKDAEEFVLRLPVEPNHAI--WGALV 373
S+ ++ G D S++++ + G V D + R+ +H++ W AL+
Sbjct: 293 SWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRM---EDHSVMSWTALI 343
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 181 AISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
A+S M G P++ TF+ L + G+ +H ++ E D +L NSL+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 240 SMYAKCGEIDDSYRIFSNM---AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 296
S+Y+K G+ + +F M RD +SW++M+ ++GR +A+ V+ LE GL P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 297 DTVTFLGVLTACAHAGLVDKG 317
+ + V+ AC+++ V G
Sbjct: 165 NDYCYTAVIRACSNSDFVGVG 185
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 230/441 (52%), Gaps = 38/441 (8%)
Query: 24 SDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGL 83
+D KP+ T L AC GL G Q+H I G+ D D ++ L+ +Y+ G
Sbjct: 102 NDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGF---DNDPHVQTGLISLYAELGC 158
Query: 84 MDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLS 143
+D ++F+++P + + T M++
Sbjct: 159 LD--------------------------------SCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 144 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV- 202
G V A LF+ MP+RD IAW +MISGY Q EA+++F M G +NG +
Sbjct: 187 CGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVK-VNGVAMIS 245
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 262
+ A + LDQGR H + + + L +LV +YAKCG+++ + +F M ++
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 263 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
+W+S + GL+ +G + L ++ M + G+ P+ VTF+ VL C+ G VD+G F+
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFD 365
Query: 323 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 382
SM N +G++P +HY +++L RAG+++DA + ++P++P+ A+W +L+ + K +
Sbjct: 366 SMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYK-N 424
Query: 383 ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL 442
++ A+K++LEL+ N +V L NIYA ++ ++ +R+ M+ KGVRK PGCS +
Sbjct: 425 LELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVME 484
Query: 443 VKGRVHVFSSGDRLEPHVEDI 463
V G VH F GD+ P I
Sbjct: 485 VNGEVHEFFVGDKSHPKYTQI 505
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 36/226 (15%)
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHG--FSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
A SMI + ++ + ++ + +++ G P N T L A + + G Q+HG
Sbjct: 73 ALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHG 132
Query: 222 MQVKTIYEYDLILENSLVSMY-------------------------------AKCGEIDD 250
M ++ ++ D ++ L+S+Y A+CG++
Sbjct: 133 MTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVF 192
Query: 251 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 310
+ ++F M RD I+WN+MI G + G + EAL V+ M G+ + V + VL+AC
Sbjct: 193 ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQ 252
Query: 311 AGLVDKG-WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 355
G +D+G W +S + ++ ++++L + G ++ A E
Sbjct: 253 LGALDQGRWA--HSYIERNKIKITVRLATTLVDLYAKCGDMEKAME 296
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+A G EAL +F M L K NG IS+ AC L GR H+ + N
Sbjct: 211 MISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNK 270
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
K+ RL +LV +Y+ G M+ A G + + + +S +NG G EK
Sbjct: 271 IKI---TVRLATTLVDLYAKCGDMEKAMEVFWG-MEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 121 ELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA-----WTSMISG 171
ELF + N + + ++ G G V + FDSM + I + ++
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 172 YVQNELIAEAISLFGEM 188
Y + + +A+S+ +M
Sbjct: 387 YARAGRLEDAVSIIQQM 403
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 246/464 (53%), Gaps = 37/464 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M + G EAL +F M S +P+ + +S +C+ L G+ H ++ NG
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ D N++I+ Y++ + + A
Sbjct: 368 FE-----------------------------------SWDNICNALIDMYMKCHRQDTAF 392
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+FD + + + W +++GY+ G+V A + F++MP+++ ++W ++ISG VQ L E
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 181 AISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
AI +F M + G + T + A G + LD + ++ K + D+ L +LV
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
M+++CG+ + + IF+++ RD +W + I ++ G A A+ +++ M+E GL PD V
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
F+G LTAC+H GLV +G E+F SM+ +G+ P HY +++LLGRAG +++A + +
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 419
+P+EPN IW +L+ C + + + ++A+ A +++ L P +V L N+YA+ R +
Sbjct: 633 MPMEPNDVIWNSLLAACRV-QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691
Query: 420 LTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
+ +R M+ KG+RK PG S I ++G+ H F+SGD P + +I
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 163/388 (42%), Gaps = 48/388 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A +G EA+LLFL+M S P+ TF ACA G Q+H ++ G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D + ++ SLV Y+ G +D A + ++ + S SMI GY + + A
Sbjct: 165 YAKDLF---VQNSLVHFYAECGELDSARKVFD-EMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 121 ELF-----DTVPIRNKIAWTCMISG----------------------------------- 140
+LF D N + C+IS
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y+ + A LFD + +M S YV+ L EA+ +F MM G P +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ + + G+ HG ++ +E + N+L+ MY KC D ++RIF M+
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
+ ++WNS++ G ++G A +ETM E + V++ +++ L ++ E+
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPE----KNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAG 348
F SM + G+ +SI + G G
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLG 484
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 9/208 (4%)
Query: 124 DTVPIRNKIAWTCMISGYLS---AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
D I +A +C + S A +VF+ + + + + S+I GY + L E
Sbjct: 63 DVSTITKLVARSCELGTRESLSFAKEVFENSESYGT-----CFMYNSLIRGYASSGLCNE 117
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
AI LF MM G SP TF A G Q+HG+ VK Y DL ++NSLV
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTV 299
YA+CGE+D + ++F M+ R+ +SW SMI G + A +A+ ++ M+ + + P++V
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNS 327
T + V++ACA ++ G +++ + NS
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNS 265
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 237/463 (51%), Gaps = 36/463 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+ G E+A+ ++ M KP+ T I L +C+ L G++ + + NG
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
R+ LV N++++ + + G + +A+
Sbjct: 288 L-------RMTIPLV----------------------------NALMDMFSKCGDIHEAR 312
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+FD + R ++WT MISGY G + + LFD M ++D + W +MI G VQ + +
Sbjct: 313 RIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQD 372
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A++LF EM P T A + LD G +H K ++ L SLV
Sbjct: 373 ALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVD 432
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MYAKCG I ++ +F + R+ +++ ++I GL+ HG AS A++ + M++ G+ PD +T
Sbjct: 433 MYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEIT 492
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
F+G+L+AC H G++ G + F+ M + + L P HY +++LLGRAG +++A+ + +
Sbjct: 493 FIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
P+E + A+WGAL+ C + + ++ +A K+LLELDP ++ +V L +Y + +
Sbjct: 553 PMEADAAVWGALLFGCRM-HGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDA 611
Query: 421 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
R+ M +GV K PGCS I V G V F D+ P E I
Sbjct: 612 KRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKI 654
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 123/256 (48%), Gaps = 16/256 (6%)
Query: 116 LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS------------MPDRDSI 163
LEK + L I+ ++ +I ++ ++ C L +S + + +
Sbjct: 60 LEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIF 119
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFS---PLNGTFAVLFGAMGSVAYLDQGRQLH 220
+W I G+ ++E E+ L+ +M+ HG P + T+ VLF + G +
Sbjct: 120 SWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMIL 179
Query: 221 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 280
G +K E + N+ + M+A CG+++++ ++F RD +SWN +I G G A
Sbjct: 180 GHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAE 239
Query: 281 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 340
+A+ VY+ M G+ PD VT +G++++C+ G +++G E F V GL+ ++
Sbjct: 240 KAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE-FYEYVKENGLRMTIPLVNAL 298
Query: 341 INLLGRAGKVKDAEEF 356
+++ + G + +A
Sbjct: 299 MDMFSKCGDIHEARRI 314
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 158/379 (41%), Gaps = 80/379 (21%)
Query: 50 RQLHAQLIVNGWKLDDY-DGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMIN 108
+Q+ AQ+I+NG LD + RL S + +DY+ L+G + N + S N I
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRY--LDYSVKILKG-IENPNIFSWNVTIR 126
Query: 109 GYVQAGQLEKAQELFD---------------TVPIRNKIAWTCMIS--GYLSAGQVFK-- 149
G+ ++ +++ L+ T P+ K+ +S G++ G V K
Sbjct: 127 GFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLR 186
Query: 150 -----------------------ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFG 186
A +FD P RD ++W +I+GY + +AI ++
Sbjct: 187 LELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 187 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
M + G P + T L + + L++G++ + + + L N+L+ M++KCG
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCG 306
Query: 247 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHG----------------------------- 277
+I ++ RIF N+ R +SW +MI G + G
Sbjct: 307 DIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQ 366
Query: 278 --RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGF 334
R +AL +++ M PD +T + L+AC+ G +D G W + + Y L
Sbjct: 367 AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW--IHRYIEKYSLSLNV 424
Query: 335 DHYISIINLLGRAGKVKDA 353
S++++ + G + +A
Sbjct: 425 ALGTSLVDMYAKCGNISEA 443
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 191/317 (60%), Gaps = 7/317 (2%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y +G+V A +F+ MP+R+ ++WT+MISG+ Q + + L+ +M P + TF
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
L A L QGR +H + + L + NSL+SMY KCG++ D++RIF +
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
+D +SWNSMI G + HG A +A+ ++E M+ + G PD +T+LGVL++C HAGLV +G +
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
FN M +GL+P +HY +++LLGR G +++A E + +P++PN IWG+L+ C
Sbjct: 345 FFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSC--- 400
Query: 380 KTDADVAS--RATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 437
+ DV + RA + L L+P A HV L N+YA+ E ++RK M+ KG++ PG
Sbjct: 401 RVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPG 460
Query: 438 CSWILVKGRVHVFSSGD 454
CSWI + V +F + D
Sbjct: 461 CSWIEINNYVFMFKAED 477
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 89/224 (39%), Gaps = 40/224 (17%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI GFA + L L+ +M S S PN TF +L AC G GR +H Q +
Sbjct: 192 MISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTL--- 248
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
GL Y + NS+I+ Y + G L+ A
Sbjct: 249 -------------------HMGLKSYLHIS-------------NSLISMYCKCGDLKDAF 276
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR-----DSIAWTSMISGYVQN 175
+FD ++ ++W MI+GY G +A +LF+ M + D+I + ++S
Sbjct: 277 RIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHA 336
Query: 176 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
L+ E F M HG P ++ L +G L + +L
Sbjct: 337 GLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALEL 380
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 275
G H + +K + D+ L +SLV +Y GE++++Y++F M R+ +SW +MI G +
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 335
R L +Y M + P+ TF +L+AC +G + +G V+ L G
Sbjct: 199 EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG-----RSVHCQTLHMGLK 253
Query: 336 HYI----SIINLLGRAGKVKDA 353
Y+ S+I++ + G +KDA
Sbjct: 254 SYLHISNSLISMYCKCGDLKDA 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSP 195
+IS Y G + A +FD ++D ++W SMI+GY Q+ L +AI LF MM G P
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 196 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 255
T+ + + + +GR+ + + + +L + LV + + G + ++ +
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELI 381
Query: 256 SNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 297
NM + + + W S++ HG + E L L PD
Sbjct: 382 ENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM--LEPD 422
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 257/502 (51%), Gaps = 44/502 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ + NG++E++L L M ++ PN TF + A GL + +H Q++
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC 277
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ LD R+ L+++Y+ G M A N D + MI + Q G +A
Sbjct: 278 YVLDP---RVGVGLLQLYTQLGDMSDAFKVFNEMPKN-DVVPWSFMIARFCQNGFCNEAV 333
Query: 121 ELF----DTVPIRNKIAWTCMISG--------------------------YLSAG--QVF 148
+LF + + N+ + +++G Y+S V+
Sbjct: 334 DLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY 393
Query: 149 KACD-------LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
C+ LF + ++ ++W ++I GY +A S+F E + + S TF+
Sbjct: 394 AKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFS 453
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
GA S+A +D G Q+HG+ +KT + + NSL+ MYAKCG+I + +F+ M
Sbjct: 454 SALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI 513
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
D SWN++I G S HG +AL + + M + P+ +TFLGVL+ C++AGL+D+G E F
Sbjct: 514 DVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECF 573
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 381
SM+ +G++P +HY ++ LLGR+G++ A + + +P EP+ IW A++ +++
Sbjct: 574 ESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA-SMNQN 632
Query: 382 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
+ + A R+ + +L+++P + +V + N+YA + + S+RK M+ GV+K PG SWI
Sbjct: 633 NEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWI 692
Query: 442 LVKGRVHVFSSGDRLEPHVEDI 463
+G VH FS G P ++ I
Sbjct: 693 EHQGDVHYFSVGLSDHPDMKLI 714
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 195/446 (43%), Gaps = 86/446 (19%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLA--YACA---GLSFPYLGRQ---- 51
++ + GF ++AL LF +M + N +F++LA YAC GL + L R+
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMP----ERNNVSFVTLAQGYACQDPIGL-YSRLHREGHEL 144
Query: 52 -----------------------LHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYAS 88
LH+ ++ G+ + + G +L+ YSV G +D A
Sbjct: 145 NPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGA---ALINAYSVCGSVDSAR 201
Query: 89 NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQEL---------------FDTV------- 126
EG L D +++ YV+ G E + +L FDT
Sbjct: 202 TVFEGILCK-DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGL 260
Query: 127 -------PIRNKIAWTC----------MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMI 169
+ +I TC ++ Y G + A +F+ MP D + W+ MI
Sbjct: 261 GAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320
Query: 170 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG--AMGSVAYLDQGRQLHGMQVKTI 227
+ + QN EA+ LF M P T + + A+G + L G QLHG+ VK
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVG 378
Query: 228 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYE 287
++ D+ + N+L+ +YAKC ++D + ++F+ ++ ++++SWN++I+G + G +A +++
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 288 TMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA 347
L + VTF L ACA +D G ++ + + + S+I++ +
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK-VAVSNSLIDMYAKC 497
Query: 348 GKVKDAEEFVLRLPVEPNHAIWGALV 373
G +K A+ + + A W AL+
Sbjct: 498 GDIKFAQSVFNEMET-IDVASWNALI 522
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 7/230 (3%)
Query: 133 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 192
A +++ Y+ AG A +LFD MP+R+++++ ++ GY + I L+ + G
Sbjct: 86 ATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREG 141
Query: 193 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 252
F S+ + LH VK Y+ + + +L++ Y+ CG +D +
Sbjct: 142 HELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSAR 201
Query: 253 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 312
+F + +D + W ++ ++G ++L + M G P+ TF L A G
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261
Query: 313 LVDKGWELFNSMVNS-YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 361
D + ++ + Y L P + ++ L + G + DA + +P
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP 309
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 246/464 (53%), Gaps = 37/464 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M + G EAL +F M S +P+ + +S +C+ L G+ H ++ NG
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ D N++I+ Y++ + + A
Sbjct: 368 FE-----------------------------------SWDNICNALIDMYMKCHRQDTAF 392
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+FD + + + W +++GY+ G+V A + F++MP+++ ++W ++ISG VQ L E
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 181 AISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
AI +F M + G + T + A G + LD + ++ K + D+ L +LV
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
M+++CG+ + + IF+++ RD +W + I ++ G A A+ +++ M+E GL PD V
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
F+G LTAC+H GLV +G E+F SM+ +G+ P HY +++LLGRAG +++A + +
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 419
+P+EPN IW +L+ C + + + ++A+ A +++ L P +V L N+YA+ R +
Sbjct: 633 MPMEPNDVIWNSLLAACRV-QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691
Query: 420 LTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
+ +R M+ KG+RK PG S I ++G+ H F+SGD P + +I
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 163/388 (42%), Gaps = 48/388 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A +G EA+LLFL+M S P+ TF ACA G Q+H ++ G
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D + ++ SLV Y+ G +D A + ++ + S SMI GY + + A
Sbjct: 165 YAKDLF---VQNSLVHFYAECGELDSARKVFD-EMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 121 ELF-----DTVPIRNKIAWTCMISG----------------------------------- 140
+LF D N + C+IS
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y+ + A LFD + +M S YV+ L EA+ +F MM G P +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ + + G+ HG ++ +E + N+L+ MY KC D ++RIF M+
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
+ ++WNS++ G ++G A +ETM E + V++ +++ L ++ E+
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPE----KNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAG 348
F SM + G+ +SI + G G
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLG 484
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 9/208 (4%)
Query: 124 DTVPIRNKIAWTCMISGYLS---AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
D I +A +C + S A +VF+ + + + + S+I GY + L E
Sbjct: 63 DVSTITKLVARSCELGTRESLSFAKEVFENSESYGT-----CFMYNSLIRGYASSGLCNE 117
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
AI LF MM G SP TF A G Q+HG+ VK Y DL ++NSLV
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTV 299
YA+CGE+D + ++F M+ R+ +SW SMI G + A +A+ ++ M+ + + P++V
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNS 327
T + V++ACA ++ G +++ + NS
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNS 265
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 238/452 (52%), Gaps = 38/452 (8%)
Query: 14 ALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRS 73
A+ ++ ++ +KP+ TF + +S + GRQ+H Q++V G+
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF------------ 147
Query: 74 LVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIA 133
D + + + G +I Y G L A+++FD + +++
Sbjct: 148 -----------DSSVHVVTG------------LIQMYFSCGGLGDARKMFDEMLVKDVNV 184
Query: 134 WTCMISGYLSAGQVFKACDLFDSMPD--RDSIAWTSMISGYVQNELIAEAISLFGEMMAH 191
W +++GY G++ +A L + MP R+ ++WT +ISGY ++ +EAI +F M+
Sbjct: 185 WNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME 244
Query: 192 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 251
P T + A + L+ G ++ + L N+++ MYAK G I +
Sbjct: 245 NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKA 304
Query: 252 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
+F + R+ ++W ++I GL+ HG +EAL ++ M++ G+ P+ VTF+ +L+AC+H
Sbjct: 305 LDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHV 364
Query: 312 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 371
G VD G LFNSM + YG+ P +HY +I+LLGRAGK+++A+E + +P + N AIWG+
Sbjct: 365 GWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGS 424
Query: 372 LVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 431
L+ + D ++ RA L++L+P N+ ++ L N+Y+ R E +R M+ G
Sbjct: 425 LLAASNVHH-DLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIG 483
Query: 432 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
V+K G S I V+ RV+ F SGD P VE I
Sbjct: 484 VKKMAGESSIEVENRVYKFISGDLTHPQVERI 515
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 124/311 (39%), Gaps = 63/311 (20%)
Query: 97 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 156
N D+ ++ I AG L A +F P N MI +A L D
Sbjct: 44 NRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI----------RALSLLDE 93
Query: 157 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 216
P+ SIA I+++ ++ A P TF + V+ + G
Sbjct: 94 -PNAHSIA-----------------ITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 135
Query: 217 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD-------------- 262
RQ+HG V ++ + + L+ MY CG + D+ ++F M +D
Sbjct: 136 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 195
Query: 263 -------------------KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 303
++SW +I G + GRASEA+ V++ ML + PD VT L
Sbjct: 196 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 255
Query: 304 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 363
VL+ACA G ++ G E S V+ G+ ++I++ ++G + A + V E
Sbjct: 256 VLSACADLGSLELG-ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALD-VFECVNE 313
Query: 364 PNHAIWGALVG 374
N W ++
Sbjct: 314 RNVVTWTTIIA 324
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 152/516 (29%), Positives = 257/516 (49%), Gaps = 55/516 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ G+ N ++EA+ LF M+ KP+ S+ +CA L G Q+HA I
Sbjct: 321 LLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN 380
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG---QLE 117
D Y + SL+ MY+ + A + D N+MI GY + G +L
Sbjct: 381 LGNDSY---VTNSLIDMYAKCDCLTDARKVFD-IFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 118 KAQELFDTVPIR---------------------------------------NKIAWTCMI 138
+A +F + R + A + +I
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI 496
Query: 139 SGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG 198
Y + + + +FD M +D + W SM +GYVQ EA++LF E+ P
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEF 556
Query: 199 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 258
TFA + A G++A + G++ H +K E + + N+L+ MYAKCG +D+++ F +
Sbjct: 557 TFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616
Query: 259 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
A RD + WNS+I ++HG +AL + E M+ G+ P+ +TF+GVL+AC+HAGLV+ G
Sbjct: 617 ASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGL 676
Query: 319 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 378
+ F M+ +G++P +HY+ +++LLGRAG++ A E + ++P +P +W +L+ C
Sbjct: 677 KQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCA- 734
Query: 379 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
+ ++A A + + DP ++ L NIYA+ E +R+ M+++GV K PG
Sbjct: 735 KAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGR 794
Query: 439 SWILVKGRVHVFSSGDR-------LEPHVEDILLQI 467
SWI + VH+F S D+ + ++D+L+QI
Sbjct: 795 SWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 163/359 (45%), Gaps = 59/359 (16%)
Query: 1 MIGGFAWNGFYEEALLLFLQM--TLSDSKPNGETFISLAYACAGLSFPYLGR------QL 52
M+ +G YEE+L++FL+ T DS PN S AC+GL GR QL
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDS-PNEYILSSFIQACSGLD----GRGRWMVFQL 170
Query: 53 HAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQ 112
+ L+ +G+ D Y G L L+ Y G +DYA + L + +MI+G V+
Sbjct: 171 QSFLVKSGFDRDVYVGTL---LIDFYLKDGNIDYARLVFDA-LPEKSTVTWTTMISGCVK 226
Query: 113 AGQLEKAQELF------DTVP---IRNKIAWTC--------------------------- 136
G+ + +LF + VP I + + C
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 137 ---MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF 193
+I Y+ G+V A LF+ MP+++ I+WT+++SGY QN L EA+ LF M G
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
Query: 194 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 253
P + + + S+ L G Q+H +K D + NSL+ MYAKC + D+ +
Sbjct: 347 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 254 IFSNMAYRDKISWNSMIMGLSDHG---RASEALTVYETMLEFGLYPDTVTFLGVLTACA 309
+F A D + +N+MI G S G EAL ++ M + P +TF+ +L A A
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I+ Y AG + A +F+ MP+R+ ++W++M+S + + E++ +F E
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 197 NGTFAVLFGAMGSVAYLD-QGR----QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 251
N +L + + + LD +GR QL VK+ ++ D+ + L+ Y K G ID +
Sbjct: 145 NEY--ILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 252 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
+F + + ++W +MI G GR+ +L ++ ++E + PD VL+AC+
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL 262
Query: 312 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 371
++ G ++ ++ + YGL+ +I+ + G+V A + +P N W
Sbjct: 263 PFLEGGKQI-HAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTT 320
Query: 372 LV 373
L+
Sbjct: 321 LL 322
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
FA L S L +HG + E D L N L+++Y++ G + + ++F M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY----PDTVTFLGVLTACAHAGLVD 315
R+ +SW++M+ + HG E+L V+ LEF P+ + AC +GL
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVF---LEFWRTRKDSPNEYILSSFIQAC--SGLDG 161
Query: 316 KG-WELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWG 370
+G W +F + S+ ++ GFD + + I+ + G + A LP E + W
Sbjct: 162 RGRWMVFQ--LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWT 218
Query: 371 ALVGVC 376
++ C
Sbjct: 219 TMISGC 224
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/463 (30%), Positives = 241/463 (52%), Gaps = 45/463 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+IG F + EA F ++ +PN TF ++ + LG+QLH +
Sbjct: 64 VIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALK-- 121
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
M ASN G+ +++N YV+ L A+
Sbjct: 122 -----------------------MGLASNVFVGS----------AVLNCYVKLSTLTDAR 148
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
FD N ++ T +ISGYL + +A LF +MP+R + W ++I G+ Q E
Sbjct: 149 RCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEE 208
Query: 181 AISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI-YEYDLILENSL 238
A++ F +M+ G P TF A+ ++A G+ +H +K + +++ + NSL
Sbjct: 209 AVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSL 268
Query: 239 VSMYAKCGEIDDSYRIFSNM--AYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLY 295
+S Y+KCG ++DS F+ + R+ +SWNSMI G + +GR EA+ ++E M+ + L
Sbjct: 269 ISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLR 328
Query: 296 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG---FDHYISIINLLGRAGKVKD 352
P+ VT LGVL AC HAGL+ +G+ FN VN Y P +HY ++++L R+G+ K+
Sbjct: 329 PNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKE 387
Query: 353 AEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYA 412
AEE + +P++P W AL+G C + ++ +A A ++LELDP + +V L N Y+
Sbjct: 388 AEELIKSMPLDPGIGFWKALLGGCQI-HSNKRLAKLAASKILELDPRDVSSYVMLSNAYS 446
Query: 413 ANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 455
A + ++ +R++M+ G+++ GCSWI V+ ++ VF + D+
Sbjct: 447 AMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADK 489
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 38/268 (14%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
++ + + A +FD +P+ D I+ T++I +V+ EA F ++ G P TF
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 201 AVLFGAMGSVAYLDQGRQLH--------------GMQVKTIY-----------------E 229
+ G+ + + G+QLH G V Y +
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 230 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 289
+++ +L+S Y K E +++ +F M R ++WN++I G S GR EA+ + M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 290 LEFGLY-PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 348
L G+ P+ TF +TA ++ G + + G + + S+I+ + G
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 349 KVKDAEEFVLRLPVEP------NHAIWG 370
++D+ +L E N IWG
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWG 304
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/507 (30%), Positives = 245/507 (48%), Gaps = 54/507 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I GF N + E L LFL + +G TF + AC S LG LH+ ++ G
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSL---NSMINGYVQAGQLE 117
+ ++D SL+ +YS G ++ A + D+S+ ++ +GY +G+
Sbjct: 142 F---NHDVAAMTSLLSIYSGSGRLNDAHKLFD----EIPDRSVVTWTALFSGYTTSGRHR 194
Query: 118 KAQELF----------DTVPI-----------------------------RNKIAWTCMI 138
+A +LF D+ I +N T ++
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 139 SGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG 198
+ Y G++ KA +FDSM ++D + W++MI GY N E I LF +M+ P
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQF 314
Query: 199 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY--DLILENSLVSMYAKCGEIDDSYRIFS 256
+ + S+ LD G G+ + +E+ +L + N+L+ MYAKCG + + +F
Sbjct: 315 SIVGFLSSCASLGALDLGEW--GISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
M +D + N+ I GL+ +G + V+ + G+ PD TFLG+L C HAGL+
Sbjct: 373 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 432
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 376
G FN++ Y L+ +HY +++L GRAG + DA + +P+ PN +WGAL+ C
Sbjct: 433 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492
Query: 377 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 436
L K D +A K L+ L+P NA +V L NIY+ R E +R M KG++K P
Sbjct: 493 RLVK-DTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIP 551
Query: 437 GCSWILVKGRVHVFSSGDRLEPHVEDI 463
G SWI ++G+VH F + D+ P + I
Sbjct: 552 GYSWIELEGKVHEFLADDKSHPLSDKI 578
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 2/209 (0%)
Query: 165 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 224
+ S+I+G+V N L E + LF + HG TF ++ A + G LH + V
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 225 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 284
K + +D+ SL+S+Y+ G ++D++++F + R ++W ++ G + GR EA+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 285 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 344
+++ M+E G+ PD+ + VL+AC H G +D G E + +Q +++NL
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG-EWIVKYMEEMEMQKNSFVRTTLVNLY 257
Query: 345 GRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ GK++ A V VE + W ++
Sbjct: 258 AKCGKMEKARS-VFDSMVEKDIVTWSTMI 285
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 217 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 276
+Q+H + +D L N L+ + SY +FS+ + + +NS+I G ++
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 277 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 336
E L ++ ++ + GLY TF VL AC A G +L +S ++ GF+H
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL-----HSLVVKCGFNH 144
Query: 337 YI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
+ S++++ +G++ DA + +P + + W AL
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIP-DRSVVTWTAL 183
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 242/441 (54%), Gaps = 23/441 (5%)
Query: 12 EEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLR 71
E+ + L+ +M P+ TF + AC+ L + G H +++ +G+ L++Y ++
Sbjct: 94 EKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY---VK 150
Query: 72 RSLVRMYSVFGLMDYASNALEGNLNNFDDQS------LNSMINGYVQAGQLEKAQELFDT 125
+L+ ++ G + AS FDD + +SM +GY + G++++A LFD
Sbjct: 151 NALILFHANCGDLGIASEL-------FDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 126 VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLF 185
+P ++++AW MI+G L ++ A +LFD ++D + W +MISGYV EA+ +F
Sbjct: 204 MPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIF 263
Query: 186 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI-----LENSLVS 240
EM G P T L A + L+ G++LH ++T I + N+L+
Sbjct: 264 KEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALID 323
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MYAKCG ID + +F + RD +WN++I+GL+ H A ++ ++E M ++P+ VT
Sbjct: 324 MYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVT 382
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
F+GV+ AC+H+G VD+G + F+ M + Y ++P HY ++++LGRAG++++A FV +
Sbjct: 383 FIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM 442
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
+EPN +W L+G C + + ++ A ++LL + + +V L NIYA+ + +
Sbjct: 443 KIEPNAIVWRTLLGACKIY-GNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGV 501
Query: 421 TSLRKEMRIKGVRKAPGCSWI 441
+RK V+K G S I
Sbjct: 502 QKVRKMFDDTRVKKPTGVSLI 522
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 147/368 (39%), Gaps = 87/368 (23%)
Query: 50 RQLHAQLIVNGWKLD-DYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMIN 108
+Q+HA ++VNG + G L S SV G + YA + L + D N ++
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSAS--LSVPGALKYA-HKLFDEIPKPDVSICNHVLR 85
Query: 109 GYVQAGQLEKAQELFDTVPIR----------------NKIAW------------------ 134
G Q+ + EK L+ + R +K+ W
Sbjct: 86 GSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVL 145
Query: 135 -----TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 189
+I + + G + A +LFD +AW+SM SGY + I EA+ LF EM
Sbjct: 146 NEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM- 204
Query: 190 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 249
Y DQ + N +++ KC E+D
Sbjct: 205 ---------------------PYKDQ-----------------VAWNVMITGCLKCKEMD 226
Query: 250 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 309
+ +F +D ++WN+MI G + G EAL +++ M + G +PD VT L +L+ACA
Sbjct: 227 SARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACA 286
Query: 310 HAGLVDKGWEL----FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 365
G ++ G L + S + G + ++I++ + G + A E V R + +
Sbjct: 287 VLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIE-VFRGVKDRD 345
Query: 366 HAIWGALV 373
+ W L+
Sbjct: 346 LSTWNTLI 353
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 242/462 (52%), Gaps = 39/462 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTL-SDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
+I + NG +E+A+ +F +M+ S+ K + T +S AC+ L +G +++ + +V
Sbjct: 118 LISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVT 176
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
+++ G N++++ + + G L+KA
Sbjct: 177 EFEMSVRIG-----------------------------------NALVDMFCKCGCLDKA 201
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 179
+ +FD++ +N WT M+ GY+S G++ +A LF+ P +D + WT+M++GYVQ
Sbjct: 202 RAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFD 261
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
EA+ LF M G P N L L+QG+ +HG + D ++ +LV
Sbjct: 262 EALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALV 321
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
MYAKCG I+ + +F + RD SW S+I GL+ +G + AL +Y M G+ D +
Sbjct: 322 DMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAI 381
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
TF+ VLTAC H G V +G ++F+SM + +QP +H +I+LL RAG + +AEE + +
Sbjct: 382 TFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDK 441
Query: 360 LPVEPNHAIWGALVGVCGLSKT--DADVASRATKRLLELDPLNAPGHVALCNIYAANDRH 417
+ E + + + ++ + +A R ++L +++ ++ H L ++YA+ +R
Sbjct: 442 MRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRW 501
Query: 418 IELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 459
++T++R++M+ G+RK PGCS I + G H F GD L H
Sbjct: 502 EDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSH 543
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 130/274 (47%), Gaps = 12/274 (4%)
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
+ + M+ + + ++LFGE+ G P N T V+ ++G + + +G ++HG
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 223 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 282
VK E+D + NSL+ MYA G+I+ ++++F M RD +SWN +I +GR +A
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 283 LTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 341
+ V++ M E L D T + L+AC+ ++ G ++ +V + + + +++
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALV 189
Query: 342 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGLSKTDADVASRATKRLLELDPL- 399
++ + G + D V + N W ++V G + D + L E P+
Sbjct: 190 DMFCKCGCL-DKARAVFDSMRDKNVKCWTSMVFGYVSTGRID------EARVLFERSPVK 242
Query: 400 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 433
+ A+ N Y +R E L + M+ G+R
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 150/353 (42%), Gaps = 29/353 (8%)
Query: 68 GRLRRSLVRMYSVFGLMDYASNA-LEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTV 126
GRLR+ ++ V G YA A LE FD NS++ Y G++E ++FD +
Sbjct: 57 GRLRK-VIEGEKVHG---YAVKAGLE-----FDSYVSNSLMGMYASLGKIEITHKVFDEM 107
Query: 127 PIRNKIAWTCMISGYLSAGQVFKACDLFDSMP-------DRDSIAWTSMISGYVQNELIA 179
P R+ ++W +IS Y+ G+ A +F M D +I T ++N I
Sbjct: 108 PQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIG 167
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
E I F + +F G LD+ R + ++ + ++ S+V
Sbjct: 168 ERIYRFVVTEFEMSVRIGNALVDMFCKCGC---LDKARAV----FDSMRDKNVKCWTSMV 220
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
Y G ID++ +F +D + W +M+ G R EAL ++ M G+ PD
Sbjct: 221 FGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNF 280
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
+ +LT CA G +++G + + +N + +++++ + G ++ A E
Sbjct: 281 VLVSLLTGCAQTGALEQG-KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYE 339
Query: 360 LPVEPNHAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 409
+ E + A W +L+ + G+S D+ + LD + + CN
Sbjct: 340 IK-ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACN 391
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 253/504 (50%), Gaps = 46/504 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQM-TLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
+I GF+ GF EAL +M + PN F S AC+ L P G Q+H I +
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
+ G SL MY+ G ++ A + + D S N +I G G ++A
Sbjct: 300 ELAGNAIAGC---SLCDMYARCGFLNSARRVFD-QIERPDTASWNVIIAGLANNGYADEA 355
Query: 120 QELF----------DTVPIRNK--------------------IAW-------TC--MISG 140
+F D + +R+ I W C +++
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 141 YLSAGQVFKACDLFDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y ++ +LF+ + DS++W ++++ +Q+E E + LF M+ P + T
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
L ++ L G Q+H +KT + ++N L+ MYAKCG + + RIF +M
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD 535
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
RD +SW+++I+G + G EAL +++ M G+ P+ VTF+GVLTAC+H GLV++G +
Sbjct: 536 NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLK 595
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
L+ +M +G+ P +H +++LL RAG++ +AE F+ + +EP+ +W L+ C +
Sbjct: 596 LYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACK-T 654
Query: 380 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 439
+ + +A +A + +L++DP N+ HV LC+++A++ LR M+ V+K PG S
Sbjct: 655 QGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Query: 440 WILVKGRVHVFSSGDRLEPHVEDI 463
WI ++ ++H+F + D P +DI
Sbjct: 715 WIEIEDKIHIFFAEDIFHPERDDI 738
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 173/388 (44%), Gaps = 58/388 (14%)
Query: 2 IGGFAWNGFYEEALLLF-LQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
I + FY EAL F S K T+ISL AC+ GR++H ++ +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNAL----EGNLNNFDDQSLNSMINGYVQAGQL 116
K YD L ++ MY G + A E NL ++ S+I GY Q GQ
Sbjct: 98 CK---YDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSY-----TSVITGYSQNGQG 149
Query: 117 EKAQELF------DTVPIR---------------------------------NKIAWTCM 137
+A L+ D VP + + IA +
Sbjct: 150 AEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNAL 209
Query: 138 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPL 196
I+ Y+ Q+ A +F +P +D I+W+S+I+G+ Q EA+S EM++ G F P
Sbjct: 210 IAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPN 269
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
F A S+ D G Q+HG+ +K+ + I SL MYA+CG ++ + R+F
Sbjct: 270 EYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFD 329
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
+ D SWN +I GL+++G A EA++V+ M G PD ++ +L A + +
Sbjct: 330 QIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQ 389
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLL 344
G + ++SY ++ GF +++ N L
Sbjct: 390 GMQ-----IHSYIIKWGFLADLTVCNSL 412
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 3/239 (1%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
++S Y G + A ++FD MP+R+ +++TS+I+GY QN AEAI L+ +M+ P
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
F + A S + + G+QLH +K LI +N+L++MY + ++ D+ R+F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY-PDTVTFLGVLTACAHAGLVD 315
+ +D ISW+S+I G S G EAL+ + ML FG++ P+ F L AC+ D
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 316 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
G ++ + S L S+ ++ R G + A ++ P+ A W ++
Sbjct: 288 YGSQIHGLCIKS-ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIA 344
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 21/225 (9%)
Query: 156 SMPDRDSIAWTSMISGYVQNELIAEAISLFGE-------MMAHGFSPLNGTFAV------ 202
S+ + +A +S++S EL+ + I+ + + A F+ N +F +
Sbjct: 12 SVSNSQILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI 71
Query: 203 -LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
L A S L QGR++H + + +YD IL N ++SMY KCG + D+ +F M R
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
+ +S+ S+I G S +G+ +EA+ +Y ML+ L PD F ++ ACA + V G +L
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 322 NSMVNSYGLQPGFDHYI---SIINLLGRAGKVKDAEEFVLRLPVE 363
++ L+ H I ++I + R ++ DA +P++
Sbjct: 192 AQVIK---LESS-SHLIAQNALIAMYVRFNQMSDASRVFYGIPMK 232
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 249/476 (52%), Gaps = 15/476 (3%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ G+A G ++A+ + +M ++ KP+ + SL A A LG+ +H ++ N
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ 255
Query: 61 -WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
W YD + +L+ MY G + YA + ++ + + NS+++G A L+ A
Sbjct: 256 LW----YDVYVETTLIDMYIKTGYLPYARMVFD-MMDAKNIVAWNSLVSGLSYACLLKDA 310
Query: 120 QELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISG 171
+ L + + I W + SGY + G+ KA D+ M ++ + ++WT++ SG
Sbjct: 311 EALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 231
+N A+ +F +M G P T + L +G ++ L G+++HG ++ D
Sbjct: 371 CSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICD 430
Query: 232 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 291
+ +LV MY K G++ + IF + + SWN M+MG + GR E + + MLE
Sbjct: 431 AYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLE 490
Query: 292 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 351
G+ PD +TF VL+ C ++GLV +GW+ F+ M + YG+ P +H +++LLGR+G +
Sbjct: 491 AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLD 550
Query: 352 DAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIY 411
+A +F+ + ++P+ IWGA + C + + D ++A A KRL L+P N+ ++ + N+Y
Sbjct: 551 EAWDFIQTMSLKPDATIWGAFLSSCKIHR-DLELAEIAWKRLQVLEPHNSANYMMMINLY 609
Query: 412 AANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
+ +R ++ +R MR VR SWI + VH+F + + P DI ++
Sbjct: 610 SNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 172/389 (44%), Gaps = 52/389 (13%)
Query: 5 FAWN---------GFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQ 55
AWN G +E+A+ LF +M S +K T + L C+ GRQ+H
Sbjct: 55 LAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGY 114
Query: 56 LIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQ 115
++ G LE N++ NS+I Y + G+
Sbjct: 115 VLRLG------------------------------LESNVS-----MCNSLIVMYSRNGK 139
Query: 116 LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWTSMISG 171
LE ++++F+++ RN +W ++S Y G V A L D M D + W S++SG
Sbjct: 140 LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSG 199
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 231
Y L +AI++ M G P + + L A+ +L G+ +HG ++ YD
Sbjct: 200 YASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYD 259
Query: 232 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 291
+ +E +L+ MY K G + + +F M ++ ++WNS++ GLS +A + M +
Sbjct: 260 VYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEK 319
Query: 292 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 351
G+ PD +T+ + + A G +K ++ M G+ P + +I + + G +
Sbjct: 320 EGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFR 378
Query: 352 DAEEFVLRLPVE---PNHAIWGALVGVCG 377
+A + +++ E PN A L+ + G
Sbjct: 379 NALKVFIKMQEEGVGPNAATMSTLLKILG 407
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
Query: 150 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 209
A LFD MP RD +AW ++ +++ +A+ LF EM G + T L +
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 210 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 269
+GRQ+HG ++ E ++ + NSL+ MY++ G+++ S ++F++M R+ SWNS+
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 329
+ + G +A+ + + M GL PD VT+ +L+ A GL + M G
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAG 220
Query: 330 LQPGFDHYISIINLLGRAGKVK 351
L+P S++ + G +K
Sbjct: 221 LKPSTSSISSLLQAVAEPGHLK 242
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 248/491 (50%), Gaps = 40/491 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ G +L+LF +M KP+ + +S AC+ + P +G+++H + +
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS- 260
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+++ D + S++ MYS +G + YA G + + + N MI Y + G++ A
Sbjct: 261 -RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR-NIVAWNVMIGCYARNGRVTDAF 318
Query: 121 ELFDTVPIRN------------------------------------KIAWTCMISGYLSA 144
F + +N + T +I Y
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
GQ+ A +FD M +++ I+W S+I+ YVQN A+ LF E+ P + T A +
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
A L +GR++H VK+ Y + I+ NSLV MYA CG+++D+ + F+++ +D +
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVV 498
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
SWNS+IM + HG ++ ++ M+ + P+ TF +L AC+ +G+VD+GWE F SM
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESM 558
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 384
YG+ PG +HY +++L+GR G A+ F+ +P P IWG+L+ + D
Sbjct: 559 KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNA-SRNHKDIT 617
Query: 385 VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK 444
+A A +++ +++ N +V L N+YA R ++ ++ M KG+ + S + K
Sbjct: 618 IAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAK 677
Query: 445 GRVHVFSSGDR 455
G+ HVF++GDR
Sbjct: 678 GKSHVFTNGDR 688
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 169/380 (44%), Gaps = 82/380 (21%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI GF G Y EA+ + +M + K + T+ + + AG+S G+++HA +I G
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG 160
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D Y NS+I+ Y++ G A+
Sbjct: 161 FVSDVY-----------------------------------VCNSLISLYMKLGCAWDAE 185
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
++F+ +P R+ ++W MISGYL+ G F
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGF-------------------------------S 214
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLV 239
++ LF EM+ GF P + GA V G+++H V++ E D+++ S++
Sbjct: 215 SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSIL 274
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE-FGLYPDT 298
MY+K GE+ + RIF+ M R+ ++WN MI + +GR ++A ++ M E GL PD
Sbjct: 275 DMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDV 334
Query: 299 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF-DHYI---SIINLLGRAGKVKDAE 354
+T + +L A A L ++ Y ++ GF H + ++I++ G G++K AE
Sbjct: 335 ITSINLLPASAI---------LEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAE 385
Query: 355 EFVLRLPVEPNHAIWGALVG 374
R+ E N W +++
Sbjct: 386 VIFDRM-AEKNVISWNSIIA 404
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 130 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 189
N A T + G+ + + A LFD M D+ W MI G+ L EA+ + M+
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 190 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 249
G T+ + ++ ++ L++G+++H M +K + D+ + NSL+S+Y K G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 250 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 309
D+ ++F M RD +SWNSMI G G +L +++ ML+ G PD + + L AC+
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 310 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 369
H G E+ V S SI+++ + G+V AE + ++ N W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER-IFNGMIQRNIVAW 301
Query: 370 GALVG 374
++G
Sbjct: 302 NVMIG 306
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 196/328 (59%), Gaps = 2/328 (0%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y + G V A +FD MP++D +AW S+I+G+ +N EA++L+ EM + G P T
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
L A + L G+++H +K +L N L+ +YA+CG ++++ +F M
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWE 319
++ +SW S+I+GL+ +G EA+ +++ M GL P +TF+G+L AC+H G+V +G+E
Sbjct: 153 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
F M Y ++P +H+ +++LL RAG+VK A E++ +P++PN IW L+G C +
Sbjct: 213 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Query: 380 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 439
D+D+A A ++L+L+P ++ +V L N+YA+ R ++ +RK+M GV+K PG S
Sbjct: 273 -GDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 331
Query: 440 WILVKGRVHVFSSGDRLEPHVEDILLQI 467
+ V RVH F GD+ P + I ++
Sbjct: 332 LVEVGNRVHEFLMGDKSHPQSDAIYAKL 359
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 275
G +H + +++ + + ++NSL+ +YA CG++ +Y++F M +D ++WNS+I G ++
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 335
+G+ EAL +Y M G+ PD T + +L+ACA G + G + M+ GL
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLH 125
Query: 336 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+++L R G+V++A+ + V+ N W +L+
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 71/281 (25%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I GFA NG EEAL L+ +M KP+G T +SL ACA + LG+++H +I G
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
L R+L S N +++ Y + G++E+A+
Sbjct: 120 ---------LTRNL--------------------------HSSNVLLDLYARCGRVEEAK 144
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
LFD + +N ++WT S+I G N E
Sbjct: 145 TLFDEMVDKNSVSWT-------------------------------SLIVGLAVNGFGKE 173
Query: 181 AISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--S 237
AI LF M + G P TF + A + +G + + +++ Y+ + +E+
Sbjct: 174 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGC 232
Query: 238 LVSMYAKCGEIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHG 277
+V + A+ G++ +Y +M + + W +++ + HG
Sbjct: 233 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/498 (30%), Positives = 245/498 (49%), Gaps = 50/498 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G A NG + AL+ F +M PN TF A A L P G+Q+HA + G
Sbjct: 79 LISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 138
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
LD + G S MY L D A + + + ++ N+ I+ V G+ +A
Sbjct: 139 RILDVFVGC---SAFDMYCKTRLRDDARKLFD-EIPERNLETWNAFISNSVTDGRPREAI 194
Query: 121 ELF------DTVPIRNKIAWTC-----------------------------------MIS 139
E F D P N I + +I
Sbjct: 195 EAFIEFRRIDGHP--NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLID 252
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y Q+ + +F M +++++W S+++ YVQN +A L+ +
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM 312
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ + A +A L+ GR +H VK E + + ++LV MY KCG I+DS + F M
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL--YPDTVTFLGVLTACAHAGLVDKG 317
++ ++ NS+I G + G+ AL ++E M G P+ +TF+ +L+AC+ AG V+ G
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Query: 318 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 377
++F+SM ++YG++PG +HY I+++LGRAG V+ A EF+ ++P++P ++WGAL C
Sbjct: 433 MKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACR 492
Query: 378 LSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 437
+ + A + L +LDP ++ HV L N +AA R E ++R+E++ G++K G
Sbjct: 493 M-HGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAG 551
Query: 438 CSWILVKGRVHVFSSGDR 455
SWI VK +VH F + DR
Sbjct: 552 YSWITVKNQVHAFQAKDR 569
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 14/223 (6%)
Query: 158 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 217
P R+ ++WTS+ISG QN + A+ F EM G P + TF F A+ S+ G+
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 277
Q+H + VK D+ + S MY K DD+ ++F + R+ +WN+ I G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 278 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG--LQPGFD 335
R EA+ + +P+++TF L AC+ W N + +G L+ GFD
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACS-------DWLHLNLGMQLHGLVLRSGFD 241
Query: 336 HYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+S+ N L G+ +++ +E + + N W +LV
Sbjct: 242 TDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVA 283
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/458 (31%), Positives = 235/458 (51%), Gaps = 37/458 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+A GF EAL L+ +M +P+ T +SL C LS LG+ +H G
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVH------G 256
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
W RR V Y+SN + N ++++ Y + + A+
Sbjct: 257 WIE-------RRGPV----------YSSNLILSN----------ALLDMYFKCKESGLAK 289
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
FD + ++ +W M+ G++ G + A +FD MP RD ++W S++ GY +
Sbjct: 290 RAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQR 349
Query: 181 AI-SLFGEM-MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSL 238
+ LF EM + P T L + L GR +HG+ ++ + D L ++L
Sbjct: 350 TVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSAL 409
Query: 239 VSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDT 298
+ MY KCG I+ ++ +F +D W SMI GL+ HG +AL ++ M E G+ P+
Sbjct: 410 IDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNN 469
Query: 299 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 358
VT L VLTAC+H+GLV++G +FN M + +G P +HY S+++LL RAG+V++A++ V
Sbjct: 470 VTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Query: 359 -RLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRH 417
++P+ P+ ++WG+++ C D + A A LL+L+P G+V L NIYA R
Sbjct: 530 KKMPMRPSQSMWGSILSACR-GGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRW 588
Query: 418 IELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 455
R+ M +GV+K G S ++ +H F + ++
Sbjct: 589 GYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEK 626
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 213/375 (56%), Gaps = 17/375 (4%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N++++ Y + G + + + +F+ + ++ ++WT ++ + + + ++F MP+R+++
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 164 AWTSMISGYVQNELIAEAISLFGEMM---AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 220
AWT M++GY+ E + L EM+ HG + + T + A L GR +H
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFV--TLCSMLSACAQSGNLVVGRWVH 267
Query: 221 GMQVK--------TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
+K Y+ D+++ +LV MYAKCG ID S +F M R+ ++WN++ G
Sbjct: 268 VYALKKEMMMGEEASYD-DVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSG 326
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 332
L+ HG+ + ++ M+ + PD +TF VL+AC+H+G+VD+GW F+S+ YGL+P
Sbjct: 327 LAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEP 384
Query: 333 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 392
DHY +++LLGRAG +++AE + +PV PN + G+L+G C + ++A R +
Sbjct: 385 KVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV-HGKVEIAERIKRE 443
Query: 393 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 452
L+++ P N + + N+Y A R LR +R +G+RK PG S I V VH FSS
Sbjct: 444 LIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSS 503
Query: 453 GDRLEPHVEDILLQI 467
GDR P ++I L++
Sbjct: 504 GDRSHPRTKEIYLKL 518
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 141/371 (38%), Gaps = 101/371 (27%)
Query: 40 CAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFD 99
CA SF G++LHA L +G K + RS Y SNAL
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLK------KAPRS------------YLSNAL-------- 49
Query: 100 DQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 159
Y +G++ AQ+LFD +P+ K
Sbjct: 50 -------FQFYASSGEMVTAQKLFDEIPLSEK---------------------------- 74
Query: 160 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
D++ WT+++S + + L+ ++ LF EM + + LFG + L +Q
Sbjct: 75 -DNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQG 133
Query: 220 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS----------------------- 256
HG+ VK + + N+L+ MY KCG + + RIF
Sbjct: 134 HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGL 193
Query: 257 --------NMAYRDKISWNSMIMGLSDHGRASEALTVY-ETMLEFGLYPDTVTFLGVLTA 307
M R+ ++W M+ G G E L + E + G + VT +L+A
Sbjct: 194 ERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSA 253
Query: 308 CAHAG-LVDKGWELFNSMVNS--YGLQPGFDHYI---SIINLLGRAGKVKDAEEFVLRLP 361
CA +G LV W ++ G + +D + +++++ + G + D+ V RL
Sbjct: 254 CAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI-DSSMNVFRLM 312
Query: 362 VEPNHAIWGAL 372
+ N W AL
Sbjct: 313 RKRNVVTWNAL 323
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 196/328 (59%), Gaps = 2/328 (0%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y + G V A +FD MP++D +AW S+I+G+ +N EA++L+ EM + G P T
Sbjct: 166 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
L A + L G+++H +K +L N L+ +YA+CG ++++ +F M
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 285
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWE 319
++ +SW S+I+GL+ +G EA+ +++ M GL P +TF+G+L AC+H G+V +G+E
Sbjct: 286 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 345
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
F M Y ++P +H+ +++LL RAG+VK A E++ +P++PN IW L+G C +
Sbjct: 346 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV- 404
Query: 380 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 439
D+D+A A ++L+L+P ++ +V L N+YA+ R ++ +RK+M GV+K PG S
Sbjct: 405 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 464
Query: 440 WILVKGRVHVFSSGDRLEPHVEDILLQI 467
+ V RVH F GD+ P + I ++
Sbjct: 465 LVEVGNRVHEFLMGDKSHPQSDAIYAKL 492
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 113/210 (53%), Gaps = 3/210 (1%)
Query: 165 WTSMISGYVQNELIAEAISLFGEMMAHGF-SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
W ++I GY + A SL+ EM G P T+ L A+ ++A + G +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
+++ + + ++NSL+ +YA CG++ +Y++F M +D ++WNS+I G +++G+ EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 284 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 343
+Y M G+ PD T + +L+ACA G + G + M+ GL +++L
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDL 266
Query: 344 LGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
R G+V++A+ + V+ N W +L+
Sbjct: 267 YARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 140/321 (43%), Gaps = 49/321 (15%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSD-SKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
+I G+A G A L+ +M +S +P+ T+ L A ++ LG +H+ +I +
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
G+ Y ++ SL+ +Y+ G + A + + D + NS+ING+ + G+ E+A
Sbjct: 151 GFGSLIY---VQNSLLHLYANCGDVASAYKVFD-KMPEKDLVAWNSVINGFAENGKPEEA 206
Query: 120 QELFDTVP---------------------------------------IRNKIAWTCMISG 140
L+ + RN + ++
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGT 199
Y G+V +A LFD M D++S++WTS+I G N EAI LF M + G P T
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRIFSN 257
F + A + +G + + +++ Y+ + +E+ +V + A+ G++ +Y +
Sbjct: 327 FVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 258 MAYRDKIS-WNSMIMGLSDHG 277
M + + W +++ + HG
Sbjct: 386 MPMQPNVVIWRTLLGACTVHG 406
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 198/368 (53%), Gaps = 3/368 (0%)
Query: 84 MDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLS 143
+D AS L ++ D S NSMI+GYV+ G++E A+ LFD +P R+ + W MI GY
Sbjct: 237 VDIASK-LFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAK 295
Query: 144 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAV 202
G V A LFD MP RD +A+ SM++GYVQN+ EA+ +F +M P + T +
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 262
+ A+ + L + +H V+ + L +L+ MY+KCG I + +F + +
Sbjct: 356 VLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS 415
Query: 263 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
WN+MI GL+ HG A + + L PD +TF+GVL AC+H+GLV +G F
Sbjct: 416 IDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFE 475
Query: 323 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 382
M + ++P HY ++++L R+G ++ A+ + +PVEPN IW + C K +
Sbjct: 476 LMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHK-E 534
Query: 383 ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL 442
+ K L+ N +V L N+YA+ ++ +R M+ + + K PGCSWI
Sbjct: 535 FETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIE 594
Query: 443 VKGRVHVF 450
+ GRVH F
Sbjct: 595 LDGRVHEF 602
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 25/317 (7%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP--DRD 161
N +I Y++ G L ++++FD +P R+ +++ MI GY+ G + A +LFD MP ++
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 162 SIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR--Q 218
I+W SMISGY Q ++ + A LF +M N Y+ GR
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMID---------GYVKHGRIED 270
Query: 219 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 278
G+ + D++ +++ YAK G + + +F M +RD +++NSM+ G +
Sbjct: 271 AKGL-FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKY 329
Query: 279 ASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 337
EAL ++ M E L PD T + VL A A G + K ++ +V G
Sbjct: 330 HMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQ-FYLGGKLG 388
Query: 338 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAI--WGALVG---VCGLSKTDADVASRATKR 392
+++I++ + G ++ A +L N +I W A++G + GL ++ D+ + +
Sbjct: 389 VALIDMYSKCGSIQHA---MLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERL 445
Query: 393 LLELDPLNAPGHVALCN 409
L+ D + G + C+
Sbjct: 446 SLKPDDITFVGVLNACS 462
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 160 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
D W ++I + + +A+ L M+ +G S + +++ A + ++ G Q+
Sbjct: 84 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 220 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 279
HG KT DL L+N L+ +Y KCG + S ++F M RD +S+NSMI G G
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 280 SEALTVYETM 289
A +++ M
Sbjct: 204 VSARELFDLM 213
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 235/464 (50%), Gaps = 37/464 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSK-PNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
+I + N Y + + ++ Q+ + P+ TF + +CA L YLG+Q+H L
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
G + F + N++I+ Y++ L A
Sbjct: 139 GPR-----------------------------------FHVVTENALIDMYMKFDDLVDA 163
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 179
++FD + R+ I+W ++SGY GQ+ KA LF M D+ ++WT+MISGY
Sbjct: 164 HKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYV 223
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
EA+ F EM G P + + + + L+ G+ +H + + + N+L+
Sbjct: 224 EAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALI 283
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
MY+KCG I + ++F M +D ISW++MI G + HG A A+ + M + P+ +
Sbjct: 284 EMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
TFLG+L+AC+H G+ +G F+ M Y ++P +HY +I++L RAGK++ A E
Sbjct: 344 TFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT 403
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 419
+P++P+ IWG+L+ C + + DVA A L+EL+P + +V L NIYA + +
Sbjct: 404 MPMKPDSKIWGSLLSSCR-TPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWED 462
Query: 420 LTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
++ LRK +R + ++K PG S I V V F SGD +P +I
Sbjct: 463 VSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEI 506
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 150 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMG 208
A LF+ + + + + S+I Y N L + I ++ +++ F P TF +F +
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 209 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 268
S+ G+Q+HG K + ++ EN+L+ MY K ++ D++++F M RD ISWNS
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 269 MIMGLSDHGRASEALTVYETMLE-------------------------------FGLYPD 297
++ G + G+ +A ++ ML+ G+ PD
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 298 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 344
++ + VL +CA G ++ G ++ Y + GF + N L
Sbjct: 241 EISLISVLPSCAQLGSLELG-----KWIHLYAERRGFLKQTGVCNAL 282
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 232/455 (50%), Gaps = 37/455 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQM-TLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
MI G++ +G +E+ ++ M SD KPNG T IS+ AC S G ++H ++I N
Sbjct: 204 MISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN 263
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
++D SL N++I Y + G L+ A
Sbjct: 264 HIQMD-------LSLC----------------------------NAVIGFYAKCGSLDYA 288
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 179
+ LFD + ++ + + +ISGY++ G V +A LF M W +MISG +QN
Sbjct: 289 RALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHE 348
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
E I+ F EM+ G P T + L ++ + L G+++H ++ + ++ + S++
Sbjct: 349 EVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSII 408
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
YAK G + + R+F N R I+W ++I + HG + A ++++ M G PD V
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDV 468
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
T VL+A AH+G D +F+SM+ Y ++PG +HY ++++L RAGK+ DA EF+ +
Sbjct: 469 TLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISK 528
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 419
+P++P +WGAL+ + D ++A A RL E++P N + + N+Y R E
Sbjct: 529 MPIDPIAKVWGALLNGASV-LGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEE 587
Query: 420 LTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 454
+R +M+ G++K PG SWI + + F + D
Sbjct: 588 AEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKD 622
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 35/334 (10%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
+ +I+ Y + + +A +FD + +RN ++ ++ Y S F A LF +
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLF--------L 112
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
+W S Y + ++IS+ + A L+G G++ RQ+HG
Sbjct: 113 SWIGS-SCYSSDAARPDSISISCVLKA-----LSGCDDFWLGSL--------ARQVHGFV 158
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
++ ++ D+ + N +++ Y KC I+ + ++F M+ RD +SWNSMI G S G +
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 284 TVYETMLEFGLY-PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 342
+Y+ ML + P+ VT + V AC + + G E+ M+ ++ +Q ++I
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIG 277
Query: 343 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG---VCGLSKTDADVASRATKRLLELDPL 399
+ G + A + E + +GA++ GL K A E++ +
Sbjct: 278 FYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHGLVK-------EAMALFSEMESI 329
Query: 400 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 433
A+ + N+ H E+ + +EM G R
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSR 363
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 40/266 (15%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N MI Y + +E A+++FD + R+ ++W MISGY +G F+ C
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGS-FEDCK----------- 218
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
++ M+A F P T +F A G + L G ++H
Sbjct: 219 -------------------KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKK 259
Query: 223 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 282
++ + DL L N+++ YAKCG +D + +F M+ +D +++ ++I G HG EA
Sbjct: 260 MIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEA 319
Query: 283 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 342
+ ++ M GL G++ H +++ F M+ G +P S++
Sbjct: 320 MALFSEMESIGLSTWNAMISGLMQNNHHEEVINS----FREMIRC-GSRPNTVTLSSLLP 374
Query: 343 LLGRAGKVKDAEE---FVLRLPVEPN 365
L + +K +E F +R + N
Sbjct: 375 SLTYSSNLKGGKEIHAFAIRNGADNN 400
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 250/507 (49%), Gaps = 45/507 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLS-DSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
M+ G+ +GF E L LF M S +S+PN + +C+ G+Q H +
Sbjct: 106 MMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKY 165
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
G ++ +R +LV MYS+ A L+ +L D +S ++GY++ G ++
Sbjct: 166 GLISHEF---VRNTLVYMYSLCSGNGEAIRVLD-DLPYCDLSVFSSALSGYLECGAFKEG 221
Query: 120 QELFDTVPIRNKI---------------------------------------AWTCMISG 140
++ + + A +I+
Sbjct: 222 LDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINM 281
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y G+V A +FD ++ T+++ Y Q++ EA++LF +M P TF
Sbjct: 282 YGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTF 341
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
A+L ++ ++ L QG LHG+ +K+ Y +++ N+LV+MYAK G I+D+ + FS M +
Sbjct: 342 AILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTF 401
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
RD ++WN+MI G S HG EAL ++ M+ G P+ +TF+GVL AC+H G V++G
Sbjct: 402 RDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHY 461
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
FN ++ + +QP HY I+ LL +AG KDAE+F+ P+E + W L+ C + +
Sbjct: 462 FNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRR 521
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
+ + + + +E P ++ +V L NI+A + + +R M +GV+K PG SW
Sbjct: 522 -NYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSW 580
Query: 441 ILVKGRVHVFSSGDRLEPHVEDILLQI 467
I ++ + HVF + D P + I ++
Sbjct: 581 IGIRNQTHVFLAEDNQHPEITLIYAKV 607
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 134/320 (41%), Gaps = 73/320 (22%)
Query: 36 LAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNL 95
L CA S+ +G +HA LIV S+ E
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTN--------------------------QSSRAE--- 67
Query: 96 NNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFD 155
D +NS+IN YV+ + +A++LFD +P RN ++W M+ GY ++G F+ LF
Sbjct: 68 ---DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFK 124
Query: 156 SMPDRDSIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 214
SM SG + NE +A V+F + + ++
Sbjct: 125 SM----------FFSGESRPNEFVA---------------------TVVFKSCSNSGRIE 153
Query: 215 QGRQLHGMQVKTIYEYDLI----LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
+G+Q HG +K Y LI + N+LV MY+ C ++ R+ ++ Y D ++S +
Sbjct: 154 EGKQFHGCFLK----YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSAL 209
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
G + G E L V + +T+L L ++ ++ ++ + MV +G
Sbjct: 210 SGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGF 268
Query: 331 QPGFDHYISIINLLGRAGKV 350
+ ++IN+ G+ GKV
Sbjct: 269 NAEVEACGALINMYGKCGKV 288
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 202/368 (54%), Gaps = 8/368 (2%)
Query: 104 NSMINGYVQA-GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 162
++++ Y + + A++LFD + RN ++WT M+SGY +G + A LF+ MP+RD
Sbjct: 165 TALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDV 224
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
+W ++++ QN L EA+SLF M+ P T + A L + +H
Sbjct: 225 PSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHA 284
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
+ D+ + NSLV +Y KCG ++++ +F + + +WNSMI + HGR+ E
Sbjct: 285 FAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEE 344
Query: 282 ALTVYETMLEFGL---YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
A+ V+E M++ + PD +TF+G+L AC H GLV KG F+ M N +G++P +HY
Sbjct: 345 AIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYG 404
Query: 339 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 398
+I+LLGRAG+ +A E + + ++ + AIWG+L+ C + D+A A K L+ L+P
Sbjct: 405 CLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKI-HGHLDLAEVAVKNLVALNP 463
Query: 399 LNAPGHVA-LCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 457
N G+VA + N+Y E RK ++ + K PG S I + VH F S D+
Sbjct: 464 NNG-GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSH 522
Query: 458 PHVEDILL 465
P E+I +
Sbjct: 523 PETEEIYM 530
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 243/504 (48%), Gaps = 54/504 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ G NG + +L LF +M PN TF + AC L+ G Q+H + G
Sbjct: 78 LMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIG 137
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSL---NSMINGYVQAGQLE 117
+++ G SLV MYS G ++ A E D+SL N+MI G+V AG
Sbjct: 138 FEMMVEVGN---SLVDMYSKCGRINEA----EKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 118 KAQELFDTVPIRN-----------KIAWTCMISG-------------------------- 140
KA + F + N + C +G
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 141 ------YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
Y+ G +F A FD + ++ I+W+S+I GY Q EA+ LF +
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
+ + + G A L QG+Q+ + VK + + NS+V MY KCG +D++ +
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKC 370
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F+ M +D ISW +I G HG +++ ++ ML + PD V +L VL+AC+H+G++
Sbjct: 371 FAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 430
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+G ELF+ ++ ++G++P +HY +++LLGRAG++K+A+ + +P++PN IW L+
Sbjct: 431 KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 434
+C + D ++ K LL +D N +V + N+Y E + R+ IKG++K
Sbjct: 491 LCRVH-GDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKK 549
Query: 435 APGCSWILVKGRVHVFSSGDRLEP 458
G SW+ ++ VH F SG+ P
Sbjct: 550 EAGMSWVEIEREVHFFRSGEDSHP 573
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 111/200 (55%), Gaps = 2/200 (1%)
Query: 130 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 189
N I +I Y + A +FDSMP+R+ ++W++++SG+V N + ++SLF EM
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 190 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 249
G P TF+ A G + L++G Q+HG +K +E + + NSLV MY+KCG I+
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 250 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL--YPDTVTFLGVLTA 307
++ ++F + R ISWN+MI G G S+AL + M E + PD T +L A
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 219
Query: 308 CAHAGLVDKGWELFNSMVNS 327
C+ G++ G ++ +V S
Sbjct: 220 CSSTGMIYAGKQIHGFLVRS 239
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 273
DQG Q+H +K+ +LI N L+ MY KC E +Y++F +M R+ +SW++++ G
Sbjct: 23 DQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 274 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 333
+G +L+++ M G+YP+ TF L AC ++KG + ++ + L+ G
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ-----IHGFCLKIG 137
Query: 334 FDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
F+ + S++++ + G++ +AE+ V R V+ + W A++
Sbjct: 138 FEMMVEVGNSLVDMYSKCGRINEAEK-VFRRIVDRSLISWNAMI 180
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/535 (29%), Positives = 256/535 (47%), Gaps = 77/535 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M G A + AL L++ M PN TF + +CA G+Q+H ++ G
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMD-----------------------YASNALEGNLNN 97
LD Y + SL+ MY G ++ YAS N
Sbjct: 165 CDLDLY---VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 98 FDDQ-------SLNSMINGYVQAGQLEKAQELFDTVPIRN---------KIAWTCMISG- 140
D+ S N+MI+GY + G ++A ELF + N + C SG
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 141 -----------------------------YLSAGQVFKACDLFDSMPDRDSIAWTSMISG 171
Y G++ AC LF+ +P +D I+W ++I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH---GMQVKTIY 228
Y L EA+ LF EM+ G +P + T + A + +D GR +H ++K +
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401
Query: 229 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 288
L SL+ MYAKCG+I+ ++++F+++ ++ SWN+MI G + HGRA + ++
Sbjct: 402 NAS-SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 460
Query: 289 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 348
M + G+ PD +TF+G+L+AC+H+G++D G +F +M Y + P +HY +I+LLG +G
Sbjct: 461 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
Query: 349 KVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALC 408
K+AEE + + +EP+ IW +L+ C + + ++ + L++++P N +V L
Sbjct: 521 LFKEAEEMINMMEMEPDGVIWCSLLKACKM-HGNVELGESFAENLIKIEPENPGSYVLLS 579
Query: 409 NIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
NIYA+ R E+ R + KG++K PGCS I + VH F GD+ P +I
Sbjct: 580 NIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 634
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 132/276 (47%), Gaps = 35/276 (12%)
Query: 130 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 189
+K+ C++S + + A +F ++ + + + W +M G+ + A+ L+ M+
Sbjct: 69 SKLIEFCILSPHFEG--LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI 126
Query: 190 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 249
+ G P + TF + + +G+Q+HG +K + DL + SL+SMY + G ++
Sbjct: 127 SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLE 186
Query: 250 DSYRIFSNMAYR-------------------------------DKISWNSMIMGLSDHGR 278
D++++F +R D +SWN+MI G ++ G
Sbjct: 187 DAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN 246
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
EAL +++ M++ + PD T + V++ACA +G ++ G ++ + ++ +G
Sbjct: 247 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVN 305
Query: 339 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
++I+L + G+++ A RLP + + W L+G
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYK-DVISWNTLIG 340
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/507 (29%), Positives = 249/507 (49%), Gaps = 52/507 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G ++A+ + Q +S P+ +T+ L C S ++H ++ NG
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEG--------------------------- 93
D D L L+ MYS G +DYA +
Sbjct: 108 ---SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 94 ---NLNNFDDQS--------LNSMINGYVQAGQLEKAQELFDTVPIRNKIA----WTCMI 138
+N +S L + + L K +E+ + R + T ++
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLV 224
Query: 139 SGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM--AHGFSPL 196
Y G V A +F MP R+ ++W++MI+ Y +N EA+ F EMM SP
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
+ T + A S+A L+QG+ +HG ++ + L + ++LV+MY +CG+++ R+F
Sbjct: 285 SVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
M RD +SWNS+I HG +A+ ++E ML G P VTF+ VL AC+H GLV++
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 376
G LF +M +G++P +HY +++LLGRA ++ +A + V + EP +WG+L+G C
Sbjct: 405 GKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 377 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 436
+ + ++A RA++RL L+P NA +V L +IYA E+ ++K + +G++K P
Sbjct: 465 RI-HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 437 GCSWILVKGRVHVFSSGDRLEPHVEDI 463
G W+ V+ +++ F S D P +E I
Sbjct: 524 GRCWMEVRRKMYSFVSVDEFNPLMEQI 550
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/506 (29%), Positives = 255/506 (50%), Gaps = 51/506 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I F +G E+AL LF +M S +PN + AC+ L + G+++H + + G
Sbjct: 179 VISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKG 238
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSL---NSMINGYVQAGQLE 117
++LD+Y + +LV MY ++ A + +SL NSMI GYV G +
Sbjct: 239 FELDEY---VNSALVDMYGKCDCLEVAREVFQ----KMPRKSLVAWNSMIKGYVAKGDSK 291
Query: 118 KAQELFDTVPIR---------NKIAWTC----------MISGYL----SAGQVFKACDLF 154
E+ + + I I C I GY+ ++ C L
Sbjct: 292 SCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLI 351
Query: 155 D---------------SMPDRD-SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG 198
D S +D + +W MIS Y+ +A+ ++ +M++ G P
Sbjct: 352 DLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVV 411
Query: 199 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 258
TF + A +A L++G+Q+H ++ E D +L ++L+ MY+KCG +++RIF+++
Sbjct: 412 TFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 259 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
+D +SW MI HG+ EAL ++ M +FGL PD VT L VL+AC HAGL+D+G
Sbjct: 472 PKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGL 531
Query: 319 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA-IWGALVGVCG 377
+ F+ M + YG++P +HY +I++LGRAG++ +A E + + P ++A + L C
Sbjct: 532 KFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACC 591
Query: 378 LSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 437
L + + R + L+E P +A ++ L N+YA+ + +R +M+ G+RK PG
Sbjct: 592 L-HLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPG 650
Query: 438 CSWILVKGRVHVFSSGDRLEPHVEDI 463
CSWI + +V F + DR E++
Sbjct: 651 CSWIEMSDKVCHFFAEDRSHLRAENV 676
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 189/423 (44%), Gaps = 58/423 (13%)
Query: 1 MIGGFAWNGFYEEALLLFLQM-TLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
++ G++ N + + L +F ++ S P+ TF ++ A L +LGR +H ++ +
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKS 136
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQ------SLNSMINGYVQA 113
G+ D + SLV MY+ F N E +L FD+ S N++I+ + Q+
Sbjct: 137 GYVCDVV---VASSLVGMYAKF-------NLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 114 GQLEKAQELFD--------------TVPIR--NKIAW---------TCMISG-----YLS 143
G+ EKA ELF TV I +++ W C+ G Y++
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 144 AGQV--FKACD-------LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+ V + CD +F MP + +AW SMI GYV + + M+ G
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P T + A L G+ +HG ++++ D+ + SL+ +Y KCGE + + +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
FS SWN MI G +A+ VY+ M+ G+ PD VTF VL AC+ +
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+KG ++ S+ S L+ +++++ + G K+A +P + + W ++
Sbjct: 427 EKGKQIHLSISESR-LETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMIS 484
Query: 375 VCG 377
G
Sbjct: 485 AYG 487
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 66/356 (18%)
Query: 50 RQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQS----LNS 105
+ +H +++ G + D L +SL+ +Y F D+ S NFD +S NS
Sbjct: 24 KLVHQRILTLGLRRDVV---LCKSLINVY--FTCKDHCSA--RHVFENFDIRSDVYIWNS 76
Query: 106 MINGYVQAGQLEKAQELFD-----TVPIRNKIAWTCMISGYLSAGQVF------------ 148
+++GY + E+F ++ + + + +I Y + G+ F
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKS 136
Query: 149 -KACDL----------------------FDSMPDRDSIAWTSMISGYVQNELIAEAISLF 185
CD+ FD MP+RD +W ++IS + Q+ +A+ LF
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196
Query: 186 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 245
G M + GF P + + V A + +L++G+++H VK +E D + ++LV MY KC
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 246 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 305
++ + +F M + ++WNSMI G G + + + M+ G P T +L
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316
Query: 306 TACAHA-----GLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAE 354
AC+ + G G+ + S+VN+ D Y+ S+I+L + G+ AE
Sbjct: 317 MACSRSRNLLHGKFIHGY-VIRSVVNA-------DIYVNCSLIDLYFKCGEANLAE 364
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 127/251 (50%), Gaps = 12/251 (4%)
Query: 129 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGE 187
R+ + +I+ Y + A +F++ R D W S++SGY +N + + + +F
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 188 MMAHGFS-PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
++ P + TF + A G++ GR +H + VK+ Y D+++ +SLV MYAK
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 247 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 306
++S ++F M RD SWN++I G A +AL ++ M G P++V+ ++
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 307 ACAHAGLVDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPV 362
AC+ +++G E+ V + GF D Y+ +++++ G+ ++ A E ++P
Sbjct: 217 ACSRLLWLERGKEIHRKCV-----KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP- 270
Query: 363 EPNHAIWGALV 373
+ W +++
Sbjct: 271 RKSLVAWNSMI 281
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 232/481 (48%), Gaps = 47/481 (9%)
Query: 3 GGFAWNG----------FYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQL 52
G + WN F+E +L M ++P+ TF + C+ +G +
Sbjct: 73 GTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSV 132
Query: 53 HAQLIVNGWKLD--------DYDGRLRRSLVRMYSVFGLMD--------------YASNA 90
H ++ G+ D D+ G+ + L VFG M S
Sbjct: 133 HGLVLRIGFDKDVVVGTSFVDFYGKCK-DLFSARKVFGEMPERNAVSWTALVVAYVKSGE 191
Query: 91 LEGNLNNFDDQ------SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSA 144
LE + FD S N++++G V++G L A++LFD +P R+ I++T MI GY
Sbjct: 192 LEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKG 251
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
G + A DLF+ D AW+++I GY QN EA +F EM A P L
Sbjct: 252 GDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLM 311
Query: 205 GAMGSVAYLDQGRQ----LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
A + + + LH K Y + +L+ M AKCG +D + ++F M
Sbjct: 312 SACSQMGCFELCEKVDSYLHQRMNKFSSHY---VVPALIDMNAKCGHMDRAAKLFEEMPQ 368
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
RD +S+ SM+ G++ HG SEA+ ++E M++ G+ PD V F +L C + LV++G
Sbjct: 369 RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRY 428
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
F M Y + DHY I+NLL R GK+K+A E + +P E + + WG+L+G C L
Sbjct: 429 FELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSL-H 487
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
+ ++A + L EL+P +A +V L NIYAA DR ++ LR +M G+ K G SW
Sbjct: 488 GNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSW 547
Query: 441 I 441
I
Sbjct: 548 I 548
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 195/355 (54%), Gaps = 7/355 (1%)
Query: 100 DQSL---NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 156
DQ L NS+++ Y G L+ A++LF +P R+ ++W +I+G + G V A LFD
Sbjct: 150 DQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDE 209
Query: 157 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 216
MPD++ I+W MIS Y+ +ISLF EM+ GF T +L A G A L +G
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEG 269
Query: 217 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 276
R +H ++T ++++ +L+ MY KC E+ + RIF +++ R+K++WN MI+ H
Sbjct: 270 RSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLH 329
Query: 277 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 336
GR L ++E M+ L PD VTF+GVL CA AGLV +G ++ MV+ + ++P F H
Sbjct: 330 GRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGH 389
Query: 337 YISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDADVASRATKRL 393
+ NL AG ++AEE + LP V P W L+ + + + K L
Sbjct: 390 QWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFT-GNPTLGESIAKSL 448
Query: 394 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVH 448
+E DPLN + L NIY+ R ++ +R+ ++ + + + PGC + +K VH
Sbjct: 449 IETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 138 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
+S Y S G+++ A +F + Y+ + +A+ + +++ GF P +
Sbjct: 74 VSIYRSIGKLYCANPVFKA---------------YLVSSSPKQALGFYFDILRFGFVPDS 118
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 257
TF L + +D G+ HG +K + L ++NSL+ MY CG +D + ++F
Sbjct: 119 YTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVE 178
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
+ RD +SWNS+I G+ +G A +++ M PD + A+ G + G
Sbjct: 179 IPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEM------PDKNIISWNIMISAYLGANNPG 232
Query: 318 --WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 354
LF MV + G Q + ++N GR+ ++K+
Sbjct: 233 VSISLFREMVRA-GFQGNESTLVLLLNACGRSARLKEGR 270
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/509 (29%), Positives = 252/509 (49%), Gaps = 84/509 (16%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M+ G++ NGF +A+ F + ++ N TF S+ ACA +S +G Q+H ++ +G
Sbjct: 198 MLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSG 257
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+K + Y ++ +L+ MY+ M+ A LEG + D S NSMI G V+ G + +A
Sbjct: 258 FKTNIY---VQSALIDMYAKCREMESARALLEG-MEVDDVVSWNSMIVGCVRQGLIGEAL 313
Query: 121 ELFD------------TVP----------IRNKIAWT--CMI--SGYLS----------- 143
+F T+P KIA + C+I +GY +
Sbjct: 314 SMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDM 373
Query: 144 ---AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
G + A +F+ M ++D I+WT++++G N EA+ LF M G +P
Sbjct: 374 YAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVT 433
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
A + A + L+ G+Q+HG +K+ + L + NSLV+MY KCG ++D+ IF++M
Sbjct: 434 ASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEI 493
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
RD I+W +I+G A GL++
Sbjct: 494 RDLITWTCLIVGY-----------------------------------AKNGLLEDAQRY 518
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
F+SM YG+ PG +HY +I+L GR+G E+ + ++ VEP+ +W A++ S+
Sbjct: 519 FDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAA---SR 575
Query: 381 TDADVAS--RATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
++ + RA K L+EL+P NA +V L N+Y+A R E ++R+ M+ + + K PGC
Sbjct: 576 KHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGC 635
Query: 439 SWILVKGRVHVFSSGDRLEPHVEDILLQI 467
SW+ KG+VH F S DR P + +I ++
Sbjct: 636 SWVEEKGKVHSFMSEDRRHPRMVEIYSKV 664
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 169/323 (52%), Gaps = 9/323 (2%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N ++ ++G++++A+++FD +P R++ W MI Y ++ ++ A LF S P +++I
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
+W ++ISGY ++ EA +LF EM + G P T + S+ L +G Q+HG
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRASEA 282
+KT ++ D+ + N L++MYA+C I ++ +F M ++ ++W SM+ G S +G A +A
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 283 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 342
+ + + G + TF VLTACA G ++ +V S G + ++I+
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALID 270
Query: 343 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC---GLSKTDADVASRATKRLLELDPL 399
+ + +++ A + + V+ + W +++ C GL + R +R +++D
Sbjct: 271 MYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 400 NAPGHVALCNIYAANDRHIELTS 422
P ++ N +A + +++ S
Sbjct: 330 TIP---SILNCFALSRTEMKIAS 349
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 165/396 (41%), Gaps = 50/396 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+ +G EA LF +M KPN T S+ C L G Q+H I G
Sbjct: 96 LISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTG 155
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLM---DYASNALEGNLNNFDDQSLNSMINGYVQAGQLE 117
+ D D + L+ MY+ + +Y +EG NN + SM+ GY Q G
Sbjct: 156 F---DLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNV---TWTSMLTGYSQNGFAF 209
Query: 118 KAQELFD------------TVP---------------------------IRNKIAWTCMI 138
KA E F T P N + +I
Sbjct: 210 KAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALI 269
Query: 139 SGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG 198
Y ++ A L + M D ++W SMI G V+ LI EA+S+FG M +
Sbjct: 270 DMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 199 TFAVLFGAMG-SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 257
T + S + H + VKT Y ++ N+LV MYAK G +D + ++F
Sbjct: 330 TIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEG 389
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
M +D ISW +++ G + +G EAL ++ M G+ PD + VL+A A L++ G
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 318 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 353
++ + + S G S++ + + G ++DA
Sbjct: 450 QQVHGNYIKS-GFPSSLSVNNSLVTMYTKCGSLEDA 484
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 243/477 (50%), Gaps = 40/477 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M+ G+ + +AL +F++M N T S AC+ L LGR H +I +G
Sbjct: 134 MMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHG 193
Query: 61 WKLDDYDGR-------LRRSLVRMYSVFGLMD-------------YASNAL-EGNLNNF- 98
++ + + + R V VF M ++ N L E L F
Sbjct: 194 FEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFY 253
Query: 99 ----------DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSA 144
D + +++ +L++ +E+ + N + + ++ Y
Sbjct: 254 AMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC 313
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
G V +A +F+ M ++S++W++++ GY QN +AI +F EM F +
Sbjct: 314 GSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----CFGTVL 369
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
A +A + G+++HG V+ ++I+E++L+ +Y K G ID + R++S M+ R+ I
Sbjct: 370 KACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMI 429
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
+WN+M+ L+ +GR EA++ + M++ G+ PD ++F+ +LTAC H G+VD+G F M
Sbjct: 430 TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 384
SYG++PG +HY +I+LLGRAG ++AE + R + ++WG L+G C + +
Sbjct: 490 AKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASR 549
Query: 385 VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
VA R KR++EL+P +V L N+Y A RH + ++RK M +GV K G SWI
Sbjct: 550 VAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
+FD +D+I+WTSM+SGYV + +A+ +F EM++ G T + A +
Sbjct: 119 VFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGE 178
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
+ GR HG+ + +E++ + ++L +Y E D+ R+F M D I W +++
Sbjct: 179 VRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSA 238
Query: 273 LSDHGRASEALTVYETMLE-FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
S + EAL ++ M GL PD TF VLTAC + + +G E+ ++ + G+
Sbjct: 239 FSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GIG 297
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
S++++ G+ G V++A + V + N W AL+G
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQ-VFNGMSKKNSVSWSALLG 339
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 178 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS 237
+ EAI + + +A L V G Q H VK+ E D + NS
Sbjct: 42 LTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNS 101
Query: 238 LVSMYAKCGE-IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 296
L+S+Y K G + ++ R+F +D ISW SM+ G +AL V+ M+ FGL
Sbjct: 102 LLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDA 161
Query: 297 DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAE 354
+ T + AC+ G V G F+ +V ++G + ++H+IS + L G + DA
Sbjct: 162 NEFTLSSAVKACSELGEVRLG-RCFHGVVITHGFE--WNHFISSTLAYLYGVNREPVDAR 218
Query: 355 EFVLRLPVEPNHAIWGALVGVCGLSKTD 382
+P EP+ W A++ SK D
Sbjct: 219 RVFDEMP-EPDVICWTAVLS--AFSKND 243
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/511 (28%), Positives = 246/511 (48%), Gaps = 53/511 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I A +G EALL F M P +F AC+ L + G+Q H Q V G
Sbjct: 47 VIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFG 106
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ D + + +L+ MYS G ++ A + + + S SMI GY G A
Sbjct: 107 YQSDIF---VSSALIVMYSTCGKLEDARKVFD-EIPKRNIVSWTSMIRGYDLNGNALDAV 162
Query: 121 ELFDTVPI---------------------------------------------RNKIAWT 135
LF + + R
Sbjct: 163 SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGN 222
Query: 136 CMISGYLSAGQ--VFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF 193
++ Y G+ V A +FD + D+D +++ S++S Y Q+ + EA +F ++ +
Sbjct: 223 TLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKV 282
Query: 194 SPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 252
N T + + A+ L G+ +H ++ E D+I+ S++ MY KCG ++ +
Sbjct: 283 VTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETAR 342
Query: 253 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 312
+ F M ++ SW +MI G HG A++AL ++ M++ G+ P+ +TF+ VL AC+HAG
Sbjct: 343 KAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402
Query: 313 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
L +GW FN+M +G++PG +HY +++LLGRAG ++ A + + R+ ++P+ IW +L
Sbjct: 403 LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 462
Query: 373 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 432
+ C + K + ++A + RL ELD N ++ L +IYA R ++ +R M+ +G+
Sbjct: 463 LAACRIHK-NVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGL 521
Query: 433 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
K PG S + + G VHVF GD P E I
Sbjct: 522 VKPPGFSLLELNGEVHVFLIGDEEHPQREKI 552
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 118/229 (51%), Gaps = 15/229 (6%)
Query: 126 VPIRNKIAWTCMISGYLSAGQVFKACDL---FDSMPDR-DSIAWTSMISGYVQNELIAEA 181
+ +R+K A C +S L + + +L F+ D+ D +W S+I+ ++ AEA
Sbjct: 1 MKVRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEA 60
Query: 182 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 241
+ F M P +F A S+ + G+Q H Y+ D+ + ++L+ M
Sbjct: 61 LLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120
Query: 242 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML------EFGLY 295
Y+ CG+++D+ ++F + R+ +SW SMI G +G A +A+++++ +L + ++
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF 180
Query: 296 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 344
D++ + V++AC+ + KG ++S+ ++ GFD +S+ N L
Sbjct: 181 LDSMGLVSVISACSR--VPAKG---LTESIHSFVIKRGFDRGVSVGNTL 224
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 244/479 (50%), Gaps = 18/479 (3%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+ G E+A+ + M L K + T +L A A LG+++ I +
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ + D L +++ MY+ G + A + + D N+++ Y ++G +A
Sbjct: 406 F---ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK-DLILWNTLLAAYAESGLSGEAL 461
Query: 121 ELF-----DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISG 171
LF + VP N I W +I L GQV +A D+F M + I+WT+M++G
Sbjct: 462 RLFYGMQLEGVP-PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNG 520
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 231
VQN EAI +M G P + V A +A L GR +HG ++ +
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580
Query: 232 LI-LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 290
L+ +E SLV MYAKCG+I+ + ++F + Y + N+MI + +G EA+ +Y ++
Sbjct: 581 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLE 640
Query: 291 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV 350
GL PD +T VL+AC HAG +++ E+F +V+ ++P +HY +++LL AG+
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGET 700
Query: 351 KDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNI 410
+ A + +P +P+ + +LV C + ++ +++LLE +P N+ +V + N
Sbjct: 701 EKALRLIEEMPFKPDARMIQSLVASCN-KQRKTELVDYLSRKLLESEPENSGNYVTISNA 759
Query: 411 YAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGR--VHVFSSGDRLEPHVEDILLQI 467
YA E+ +R+ M+ KG++K PGCSWI + G VHVF + D+ + +I + +
Sbjct: 760 YAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+IG G E AL+ F++M ++ P+ ++ AC L + GR +H ++ +G
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
L+D + SL MY G++D AS + + + + + N+++ GYVQ G+ E+A
Sbjct: 204 --LEDC-VFVASSLADMYGKCGVLDDASKVFD-EIPDRNAVAWNALMVGYVQNGKNEEAI 259
Query: 121 ELFDTV------PIR---------------------------------NKIAWTCMISGY 141
LF + P R + I T +++ Y
Sbjct: 260 RLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFY 319
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G + A +FD M ++D + W +ISGYVQ L+ +AI + M T A
Sbjct: 320 CKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLA 379
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
L A L G+++ ++ +E D++L ++++ MYAKCG I D+ ++F + +
Sbjct: 380 TLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK 439
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
D I WN+++ ++ G + EAL ++ M G+ P+ +T+ ++ + G VD+ ++F
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPN 365
M S G+ P + +++N + + G ++A F+ ++ + PN
Sbjct: 500 LQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 107 INGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWT 166
++GYV LE D V + + +A Y G + A +FD +PDR+++AW
Sbjct: 195 VHGYVVKSGLE------DCVFVASSLA-----DMYGKCGVLDDASKVFDEIPDRNAVAWN 243
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 226
+++ GYVQN EAI LF +M G P T + A ++ +++G+Q H + +
Sbjct: 244 ALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN 303
Query: 227 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 286
E D IL SL++ Y K G I+ + +F M +D ++WN +I G G +A+ +
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 287 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIIN 342
+ M L D VT +++A A + G E V Y ++ F+ I ++++
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAARTENLKLGKE-----VQCYCIRHSFESDIVLASTVMD 418
Query: 343 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+ + G + DA++ V VE + +W L+
Sbjct: 419 MYAKCGSIVDAKK-VFDSTVEKDLILWNTLLA 449
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 160/395 (40%), Gaps = 82/395 (20%)
Query: 4 GFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKL 63
G+ NG EEA+ LF M +P T + A A + G+Q HA IVNG +L
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL 307
Query: 64 DDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG--------- 114
D+ G SL+ Y GL++YA + D + N +I+GYVQ G
Sbjct: 308 DNILG---TSLLNFYCKVGLIEYAEMVFDRMFEK-DVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 115 QLEKAQEL-FDTVP------------------------IRNK-----IAWTCMISGYLSA 144
QL + ++L +D V IR+ + + ++ Y
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC 423
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
G + A +FDS ++D I W ++++ Y ++ L EA+ LF M G P
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP--------- 474
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR--- 261
++I N ++ + G++D++ +F M
Sbjct: 475 --------------------------NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII 508
Query: 262 -DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
+ ISW +M+ G+ +G + EA+ M E GL P+ + L+ACAH + G +
Sbjct: 509 PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 355
++ + S++++ + G + AE+
Sbjct: 569 HGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEK 603
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 124/246 (50%), Gaps = 4/246 (1%)
Query: 129 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 188
RN+ T ++ Y + A LF + R+ +W ++I + L A+ F EM
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 189 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 248
+ + P N + A G++ + GR +HG VK+ E + + +SL MY KCG +
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224
Query: 249 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 308
DD+ ++F + R+ ++WN++++G +G+ EA+ ++ M + G+ P VT L+A
Sbjct: 225 DDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 309 AHAGLVDKGWELFN-SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 367
A+ G V++G + ++VN G++ S++N + G ++ AE R+ E +
Sbjct: 285 ANMGGVEEGKQSHAIAIVN--GMELDNILGTSLLNFYCKVGLIEYAEMVFDRM-FEKDVV 341
Query: 368 IWGALV 373
W ++
Sbjct: 342 TWNLII 347
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 22/257 (8%)
Query: 123 FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI 182
F+T+P NK+ ++ +S+ K D P S ++ +S +N I EA+
Sbjct: 6 FNTIP--NKVPFS------VSSKPSSKHHDEQAHSPS--STSYFHRVSSLCKNGEIKEAL 55
Query: 183 SLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT--IYEYDLILENSLVS 240
SL EM + + L G+Q+H +K Y + +E LV
Sbjct: 56 SLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVI 115
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
YAKC ++ + +FS + R+ SW ++I G AL + MLE ++PD
Sbjct: 116 FYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFV 175
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEF 356
V AC W F V+ Y ++ G + + S+ ++ G+ G + DA +
Sbjct: 176 VPNVCKACGAL-----KWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 357 VLRLPVEPNHAIWGALV 373
+P + N W AL+
Sbjct: 231 FDEIP-DRNAVAWNALM 246
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 224/466 (48%), Gaps = 63/466 (13%)
Query: 2 IGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGW 61
I G+A G EAL + QM S KPN T IS+ CA + G+++H I
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI---- 392
Query: 62 KLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQE 121
Y LR+ N + ++ +N +I+ Y + +++ A+
Sbjct: 393 ---KYPIDLRK---------------------NGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 122 LFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 181
+FD++ S +RD + WT MI GY Q+ +A
Sbjct: 429 MFDSL-----------------------------SPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 182 ISLFGEMMAHGFS--PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE-YDLILENSL 238
+ L EM P T + A S+A L G+Q+H ++ L + N L
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCL 519
Query: 239 VSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDT 298
+ MYAKCG I D+ +F NM +++++W S++ G HG EAL +++ M G D
Sbjct: 520 IDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDG 579
Query: 299 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 358
VT L VL AC+H+G++D+G E FN M +G+ PG +HY +++LLGRAG++ A +
Sbjct: 580 VTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIE 639
Query: 359 RLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHI 418
+P+EP +W A + C + ++ A +++ EL + + L N+YA R
Sbjct: 640 EMPMEPPPVVWVAFLSCCRI-HGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWK 698
Query: 419 ELTSLRKEMRIKGVRKAPGCSWIL-VKGRVHVFSSGDRLEPHVEDI 463
++T +R MR KGV+K PGCSW+ +KG F GD+ PH ++I
Sbjct: 699 DVTRIRSLMRHKGVKKRPGCSWVEGIKGTT-TFFVGDKTHPHAKEI 743
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 176/396 (44%), Gaps = 66/396 (16%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLS-DSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
+I +A G + AL +F +MT +P+ T +++ CA L LG+QLH + +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
+ N GN +++ Y + G +++A
Sbjct: 259 -------------------------EMIQNMFVGN----------CLVDMYAKCGMMDEA 283
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQN 175
+F + +++ ++W M++GY G+ A LF+ M + D + W++ ISGY Q
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 176 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL--- 232
L EA+ + +M++ G P T + SV L G+++H +K Y DL
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKN 401
Query: 233 ------ILENSLVSMYAKCGEIDDSYRIFSNMA--YRDKISWNSMIMGLSDHGRASEALT 284
++ N L+ MYAKC ++D + +F +++ RD ++W MI G S HG A++AL
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 285 VYETMLE--FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL---QPGFDHYIS 339
+ M E P+ T L ACA + G + +++Y L Q ++S
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ-----IHAYALRNQQNAVPLFVS 516
Query: 340 --IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+I++ + G + DA V + N W +L+
Sbjct: 517 NCLIDMYAKCGSISDA-RLVFDNMMAKNEVTWTSLM 551
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 5/241 (2%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDS--IAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+IS Y+S G + A L P D+ W S+I Y N + + LFG M + ++
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P N TF +F A G ++ + G H + + T + ++ + N+LV+MY++C + D+ ++
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGL 313
F M+ D +SWNS+I + G+ AL ++ M EFG PD +T + VL CA G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 314 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
G +L V S +Q F ++++ + G + +A + V+ + W A+V
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGN-CLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMV 302
Query: 374 G 374
Sbjct: 303 A 303
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 6/257 (2%)
Query: 111 VQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMIS 170
V+ G+ A L T I N +++ Y + A +FD M D ++W S+I
Sbjct: 143 VRCGESAHALSLV-TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201
Query: 171 GYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 229
Y + A+ +F M G P N T + S+ G+QLH V +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 230 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 289
++ + N LV MYAKCG +D++ +FSNM+ +D +SWN+M+ G S GR +A+ ++E M
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 290 LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGK 349
E + D VT+ ++ A GL + + M++S G++P IS+++ G
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGA 380
Query: 350 VKDAEE---FVLRLPVE 363
+ +E + ++ P++
Sbjct: 381 LMHGKEIHCYAIKYPID 397
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 188/328 (57%), Gaps = 4/328 (1%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I+ Y + ++ + +FD WT+++SGY N+ +A+S+F M+ + P
Sbjct: 266 LITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPN 325
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
TFA + ++ LD G+++HG+ VK E D + NSLV MY+ G ++D+ +F
Sbjct: 326 QSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFI 385
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
+ + +SWNS+I+G + HGR A ++ M+ PD +TF G+L+AC+H G ++K
Sbjct: 386 KIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEK 445
Query: 317 GWELFNSMVNSYG-LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 375
G +LF M + + HY ++++LGR GK+K+AEE + R+ V+PN +W AL+
Sbjct: 446 GRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
Query: 376 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 435
C + +D D +A + LD ++ +V L NIYA+ R ++ LR +M+ G+ K
Sbjct: 506 CRM-HSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKK 564
Query: 436 PGCSWILVKGRVHVFSSGDRLEPHVEDI 463
PG SW++++G+ H F SGD +PH I
Sbjct: 565 PGSSWVVIRGKKHEFFSGD--QPHCSRI 590
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 145/278 (52%), Gaps = 6/278 (2%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
S +M+NG ++G++++A+ LF +P+++ AW M+ GYL G+V A LF MP ++
Sbjct: 130 SWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKN 189
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
I+WT+MI G QNE EA+ LF M+ + F + A + G Q+HG
Sbjct: 190 VISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHG 249
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
+ +K + Y+ + SL++ YA C I DS ++F + W +++ G S + + +
Sbjct: 250 LIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHED 309
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--S 339
AL+++ ML + P+ TF L +C+ G +D G E+ V GL+ D ++ S
Sbjct: 310 ALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK-LGLET--DAFVGNS 366
Query: 340 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 377
++ + +G V DA +++ + + W +++ C
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCA 403
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 24/294 (8%)
Query: 101 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 160
Q+ +I ++ + ++++A+E+F+ VP + +T MI+GY + ++ A +LFD MP R
Sbjct: 36 QNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR 95
Query: 161 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGF----SPLNGTFAVLFGAMGSVAYLDQG 216
D ++W SMISG V+ + A+ LF EM + +NG F +DQ
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCF--------RSGKVDQA 147
Query: 217 RQL-HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 275
+L + M VK D NS+V Y + G++DD+ ++F M ++ ISW +MI GL
Sbjct: 148 ERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQ 202
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 335
+ R+ EAL +++ ML + + F V+TACA+A G ++ ++ L ++
Sbjct: 203 NERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIK---LGFLYE 259
Query: 336 HYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 387
Y+ S+I ++ D+ + V V A+W AL+ L+K D S
Sbjct: 260 EYVSASLITFYANCKRIGDSRK-VFDEKVHEQVAVWTALLSGYSLNKKHEDALS 312
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 150/505 (29%), Positives = 250/505 (49%), Gaps = 60/505 (11%)
Query: 13 EALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRR 72
EAL +M L +P+ T S+ AC+ L G++LHA + NG LD+ + +
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDE-NSFVGS 342
Query: 73 SLVRMYSVFGLMDYASNALEGNLNNFDDQS--LNSMINGYVQ-----------------A 113
+LV MY + +G FD + N+MI GY Q A
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGM---FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 114 GQLEKAQELFDTVPI-----------------------RNKIAWTCMISGYLSAGQVFKA 150
G L + + VP R++ ++ Y G++ A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 151 CDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM------MAHGFS-----PLNGT 199
+F M DRD + W +MI+GYV +E +A+ L +M ++ G S P + T
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ + +++ L +G+++H +K D+ + ++LV MYAKCG + S ++F +
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
++ I+WN +IM HG EA+ + M+ G+ P+ VTF+ V AC+H+G+VD+G
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA-IWGALVGVCGL 378
+F M YG++P DHY +++LLGRAG++K+A + + +P + N A W +L+G +
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 379 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
+ ++ A + L++L+P A +V L NIY++ + T +R+ M+ +GVRK PGC
Sbjct: 700 -HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGC 758
Query: 439 SWILVKGRVHVFSSGDRLEPHVEDI 463
SWI VH F +GD P E +
Sbjct: 759 SWIEHGDEVHKFVAGDSSHPQSEKL 783
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 107/194 (55%), Gaps = 6/194 (3%)
Query: 165 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 224
W ++ V++ L+ EA+ + +M+ G P N F L A+ + ++ G+Q+H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 225 KTIYEYD-LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
K Y D + + N+LV++Y KCG+ Y++F ++ R+++SWNS+I L + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 284 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG-FDHYI--SI 340
+ ML+ + P + T + V+TAC++ + + + V++YGL+ G + +I ++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG--LMMGKQVHAYGLRKGELNSFIINTL 242
Query: 341 INLLGRAGKVKDAE 354
+ + G+ GK+ ++
Sbjct: 243 VAMYGKLGKLASSK 256
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 28/285 (9%)
Query: 61 WKLDDYDGRLRRSLVRMYS-------VFGLM--DYASNALEGNLNNFDDQSLNSMINGYV 111
W +D ++R +L+R V G+ +YA AL + + D L I+ +V
Sbjct: 64 WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 112 QAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISG 171
K D+V + N +++ Y G +FD + +R+ ++W S+IS
Sbjct: 124 Y-----KFGYGVDSVTVANT-----LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISS 173
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY---LDQGRQLHGMQVKTIY 228
E A+ F M+ P + T + A ++ L G+Q+H ++
Sbjct: 174 LCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-G 232
Query: 229 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 288
E + + N+LV+MY K G++ S + + RD ++WN+++ L + + EAL
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 289 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 333
M+ G+ PD T VL AC+H ++ G EL ++Y L+ G
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKEL-----HAYALKNG 332
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 200/363 (55%), Gaps = 13/363 (3%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
S+ I+GY LE D V + + +A M +G L G++ + SMP R+
Sbjct: 108 SIGQQIHGYTIKYGLE-----LDLV-VNSSLAHMYMRNGKLQDGEI-----VIRSMPVRN 156
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
+AW ++I G QN + L+ M G P TF + + +A QG+Q+H
Sbjct: 157 LVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHA 216
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
+K + + +SL+SMY+KCG + D+ + FS D++ W+SMI HG+ E
Sbjct: 217 EAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDE 276
Query: 282 ALTVYETMLE-FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 340
A+ ++ TM E + + V FL +L AC+H+GL DKG ELF+ MV YG +PG HY +
Sbjct: 277 AIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV 336
Query: 341 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 400
++LLGRAG + AE + +P++ + IW L+ C + K +A++A R K +L++DP +
Sbjct: 337 VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK-NAEMAQRVFKEILQIDPND 395
Query: 401 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 460
+ +V L N++A+ R +++ +RK MR K V+K G SW KG VH F GDR +
Sbjct: 396 SACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKS 455
Query: 461 EDI 463
++I
Sbjct: 456 KEI 458
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 137/269 (50%), Gaps = 2/269 (0%)
Query: 110 YVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMI 169
Y + G A ++ + +N ++ +I+GY+ AG + A +FD MPDR W +MI
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 170 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 229
+G +Q E E +SLF EM GFSP T +F + + G+Q+HG +K E
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 230 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 289
DL++ +SL MY + G++ D + +M R+ ++WN++IMG + +G L +Y+ M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 290 LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGK 349
G P+ +TF+ VL++C+ + +G ++ + G S+I++ + G
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISMYSKCGC 242
Query: 350 VKDAEEFVLRLPVEPNHAIWGALVGVCGL 378
+ DA + E + +W +++ G
Sbjct: 243 LGDAAKAFSEREDE-DEVMWSSMISAYGF 270
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 44/264 (16%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G A NG E L L+ M +S +PN TF+++ +C+ L+ G+Q+HA+ I G
Sbjct: 163 LIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG 222
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ SL+ MYS G + A+ A + D+ +SMI+ Y GQ ++A
Sbjct: 223 ASSVV---AVVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWSSMISAYGFHGQGDEAI 278
Query: 121 ELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN 175
ELF+T+ + N++A+ ++ +G K +LFD M ++
Sbjct: 279 ELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK--------------- 323
Query: 176 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ-LHGMQVKTIYEYDLIL 234
+GF P + + +G LDQ + M +KT D+++
Sbjct: 324 ---------------YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT----DIVI 364
Query: 235 ENSLVSMYAKCGEIDDSYRIFSNM 258
+L+S + + R+F +
Sbjct: 365 WKTLLSACNIHKNAEMAQRVFKEI 388
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 241/514 (46%), Gaps = 70/514 (13%)
Query: 19 LQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGW----------------- 61
+Q+ KP T+ +L C+ G+++H + +G+
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 62 -KLDD----YDGRLRRSL------VRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGY 110
L D +D R L V Y+ GL++ A + + D S +M+ GY
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD-EMTEKDSYSWTAMVTGY 192
Query: 111 VQAGQLEKAQELFD-------------TVPI---------------------------RN 130
V+ Q E+A L+ TV I +
Sbjct: 193 VKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSD 252
Query: 131 KIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 190
++ W+ ++ Y G + +A ++FD + ++D ++WTSMI Y ++ E SLF E++
Sbjct: 253 EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 312
Query: 191 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 250
P TFA + A + + G+Q+HG + ++ +SLV MY KCG I+
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 372
Query: 251 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 310
+ + D +SW S+I G + +G+ EAL ++ +L+ G PD VTF+ VL+AC H
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432
Query: 311 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 370
AGLV+KG E F S+ + L DHY +++LL R+G+ + + + +P++P+ +W
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492
Query: 371 ALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIK 430
+++G C + + D+A A + L +++P N +V + NIYAA + E +RK M+
Sbjct: 493 SVLGGCS-TYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEI 551
Query: 431 GVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDIL 464
GV K PG SW +K + HVF + D P I+
Sbjct: 552 GVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIV 585
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 175 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 234
+L+ EA+ L G P T+ L L++G+++H + + +++
Sbjct: 67 QKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122
Query: 235 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
N L+ MYAKCG + D+ ++F M RD SWN M+ G ++ G EA +++ M E
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE--- 179
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV---- 350
D+ ++ ++T ++ L++ M +P +SI A K
Sbjct: 180 -KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNI-FTVSIAVAAAAAVKCIRRG 237
Query: 351 KDAEEFVLRLPVEPNHAIWGALV---GVCG 377
K+ ++R ++ + +W +L+ G CG
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 26/308 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI + + + E LF ++ S +PN TF + ACA L+ LG+Q+H + G
Sbjct: 290 MIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVG 349
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D Y SLV MY+ G ++ A + ++G D S S+I G Q GQ ++A
Sbjct: 350 F--DPYSF-ASSSLVDMYTKCGNIESAKHVVDG-CPKPDLVSWTSLIGGCAQNGQPDEAL 405
Query: 121 ELFD------TVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTS-----MI 169
+ FD T P + + + ++S AG V K + F S+ ++ ++ TS ++
Sbjct: 406 KYFDLLLKSGTKP--DHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLV 463
Query: 170 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 229
++ + S+ EM P +A + G + +D + ++ I
Sbjct: 464 DLLARSGRFEQLKSVISEM---PMKPSKFLWASVLGGCSTYGNIDLAEEA-AQELFKIEP 519
Query: 230 YDLILENSLVSMYAKCGEIDDSYRIFSNM-----AYRDKISWNSMIMGLSDHGRASEALT 284
+ + ++ ++YA G+ ++ ++ M R SW + A +
Sbjct: 520 ENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHP 579
Query: 285 VYETMLEF 292
+Y ++EF
Sbjct: 580 MYNQIVEF 587
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 247/501 (49%), Gaps = 43/501 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+ N Y+EAL F M + K + + S+ A LS G +LHA +I +G
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
W D + ++ +L+ MYS L Y A +++ D S ++I GY Q +A
Sbjct: 417 W---DSNLQVGNTLIDMYSKCNLTCYMGRAFL-RMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFK------------------------------- 149
ELF V + ++ L A V K
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYG 532
Query: 150 -------ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
A +F+S+ +D ++WTSMIS N +EA+ LF M+ G S +
Sbjct: 533 KCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLC 592
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 262
+ A S++ L++GR++H ++ + + + ++V MYA CG++ + +F + +
Sbjct: 593 ILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG 652
Query: 263 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
+ + SMI HG A+ +++ M + PD ++FL +L AC+HAGL+D+G
Sbjct: 653 LLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLK 712
Query: 323 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 382
M + Y L+P +HY+ ++++LGRA V +A EFV + EP +W AL+ C S ++
Sbjct: 713 IMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACR-SHSE 771
Query: 383 ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL 442
++ A +RLLEL+P N V + N++A R ++ +R +M+ G+ K PGCSWI
Sbjct: 772 KEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
Query: 443 VKGRVHVFSSGDRLEPHVEDI 463
+ G+VH F++ D+ P ++I
Sbjct: 832 MDGKVHKFTARDKSHPESKEI 852
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y G + A +FD MPDR + AW +MI YV N A A++L+ M G +F
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
L A + + G +LH + VK Y + N+LVSMYAK ++ + R+F
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 261 R-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
+ D + WNS++ S G++ E L ++ M G P++ T + LTAC G E
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ S++ S ++I + R GK+ AE +LR + W +L+
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER-ILRQMNNADVVTWNSLI 358
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 161/383 (42%), Gaps = 57/383 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MIG + NG AL L+ M + +F +L ACA L G +LH+ L+ G
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQ----L 116
+ G + +LV MY+ + A +G D NS+++ Y +G+ L
Sbjct: 213 YH---STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETL 269
Query: 117 EKAQELFDTVPIRNKIA----------------------------------WTC--MISG 140
E +E+ T P N + C +I+
Sbjct: 270 ELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAM 329
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y G++ +A + M + D + W S+I GYVQN + EA+ F +M+A G +
Sbjct: 330 YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSM 389
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ A G ++ L G +LH +K ++ +L + N+L+ MY+KC R F M
Sbjct: 390 TSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA----------- 309
+D ISW ++I G + + EAL ++ + + + D + +L A +
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 310 HAGLVDKGW---ELFNSMVNSYG 329
H ++ KG + N +V+ YG
Sbjct: 510 HCHILRKGLLDTVIQNELVDVYG 532
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 194 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL-ILENSLVSMYAKCGEIDDSY 252
SP+ FA + G + QGRQLH KT ++L L LV MY KCG +DD+
Sbjct: 78 SPVEA-FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAE 136
Query: 253 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 312
++F M R +WN+MI +G + AL +Y M G+ +F +L ACA
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 313 LVDKGWELFNSMVN 326
+ G EL + +V
Sbjct: 197 DIRSGSELHSLLVK 210
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 200/361 (55%), Gaps = 7/361 (1%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDL 153
D+ + S++ A LE+ ++L + ++ N +I+ Y V A +
Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLH-CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV 186
Query: 154 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
FD + + + + +MI+GY + EA+SLF EM P T + + + L
Sbjct: 187 FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSL 246
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 273
D G+ +H K + + + +L+ M+AKCG +DD+ IF M Y+D +W++MI+
Sbjct: 247 DLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAY 306
Query: 274 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 333
++HG+A +++ ++E M + PD +TFLG+L AC+H G V++G + F+ MV+ +G+ P
Sbjct: 307 ANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPS 366
Query: 334 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 393
HY S+++LL RAG ++DA EF+ +LP+ P +W L+ C S + D+A + ++R+
Sbjct: 367 IKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS-SHNNLDLAEKVSERI 425
Query: 394 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 453
ELD + +V L N+YA N + + SLRK M+ + K PGCS I V VH F SG
Sbjct: 426 FELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSG 485
Query: 454 D 454
D
Sbjct: 486 D 486
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 12/226 (5%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
LF++M + D + + SM GY + E SLF E++ G P N TF L A
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
L++GRQLH + +K + ++ + +L++MY +C ++D + +F + + +N+MI G
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 204
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQ 331
+ R +EAL+++ M L P+ +T L VL++CA G +D G W ++ Y +
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW------IHKYAKK 258
Query: 332 PGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
F Y+ + I++ + G + DA ++ + A W A++
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA-WSAMI 303
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 237/463 (51%), Gaps = 44/463 (9%)
Query: 9 GFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDG 68
G +E+ L F M +S + +GE CA L + ++H +I G++
Sbjct: 273 GKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFE------ 326
Query: 69 RLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI 128
+Y S N++I+ Y + G+++ A+ LF +
Sbjct: 327 ----------------EYLP-------------SRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 129 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA--------WTSMISGYVQNELIAE 180
+ +W +I+ ++ AG++ +A LF + + + + WTS+I G +
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
++ F +M + T + + L+ GR++HG ++T +++++N+LV+
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVN 477
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
MYAKCG + + +F + +D ISWNS+I G HG A +AL++++ M+ G +PD +
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIA 537
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
+ VL+AC+HAGLV+KG E+F SM +GL+P +HY I++LLGR G +K+A E V +
Sbjct: 538 LVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
P+EP + GAL+ C + K + D+A +L L+P ++ L NIY+A R E
Sbjct: 598 PMEPKVCVLGALLNSCRMHK-NVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEES 656
Query: 421 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
++R + K ++K G SWI VK + + FSSG ++ E I
Sbjct: 657 ANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETI 699
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 159/388 (40%), Gaps = 56/388 (14%)
Query: 8 NGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYD 67
+G YE AL L+ M +G + AC L L R H Q+I G
Sbjct: 136 HGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIG------- 188
Query: 68 GRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVP 127
L+ NL+ +N ++ Y +AG++ A LF +P
Sbjct: 189 -----------------------LKENLH-----VVNELLTLYPKAGRMGDAYNLFVEMP 220
Query: 128 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAIS 183
+RN+++W MI G+ A +F+ M D + WTS++S + Q + +
Sbjct: 221 VRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLK 280
Query: 184 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA 243
F M G + AV F + L ++HG +K +E L N+L+ +Y
Sbjct: 281 YFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYG 340
Query: 244 KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF----GLYPDTV 299
K G++ D+ +F + + SWNS+I D G+ EAL+++ + E + + V
Sbjct: 341 KQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV------KDA 353
T+ V+ C G D E F M S L + ++I +L ++ ++
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA----NSVTICCILSICAELPALNLGREI 456
Query: 354 EEFVLRLPVEPNHAIWGALVGV---CGL 378
V+R + N + ALV + CGL
Sbjct: 457 HGHVIRTSMSENILVQNALVNMYAKCGL 484
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 154/364 (42%), Gaps = 57/364 (15%)
Query: 94 NLNNFDDQSL----NSMINGYVQAGQLEK--AQELFDTVPIRNKIAWTCMISGYLSAGQV 147
+L + +DQSL + ++ + A Q + AQ L R+ +IS Y G +
Sbjct: 46 SLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLL 105
Query: 148 FKACDLFDSMPD---RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
A ++F+++ D W S++ V + L A+ L+ M G + ++
Sbjct: 106 LDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLIL 165
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
A + R H ++ + +L + N L+++Y K G + D+Y +F M R+++
Sbjct: 166 RACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRM 225
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
SWN MI G S A+ ++E M PD VT+ VL+ + G + + F+ M
Sbjct: 226 SWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Query: 325 ------------------------------VNSYGLQPGFDHYI----SIINLLGRAGKV 350
V+ Y ++ GF+ Y+ ++I++ G+ GKV
Sbjct: 286 RMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKV 345
Query: 351 KDAEEFVLRLPVEPNHAI--WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALC 408
KDAE ++ N I W +L+ S DA A EL+ +N HV C
Sbjct: 346 KDAEHLFRQI---RNKGIESWNSLI----TSFVDAGKLDEALSLFSELEEMN---HV--C 393
Query: 409 NIYA 412
N+ A
Sbjct: 394 NVKA 397
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G G +++L F QM S N T + CA L LGR++H +I
Sbjct: 405 VIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTS 464
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ ++ +LV MY+ GL+ S E + + D S NS+I GY G EKA
Sbjct: 465 MSENIL---VQNALVNMYAKCGLLSEGSLVFEA-IRDKDLISWNSIIKGYGMHGFAEKAL 520
Query: 121 ELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR 160
+FD + + IA ++S AG V K ++F SM R
Sbjct: 521 SMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKR 564
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 197/362 (54%), Gaps = 3/362 (0%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNK-IAWTCMISGYLSAGQVFKACDLFDSMPDRDS 162
N++++ Y + G +E A ++F + R +++ ++SGY+++G A LF M D
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
W+ M+ Y ++ EAI +F E+ A G P T L +A L RQ HG
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 223 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 282
++ D+ L+ +L+ +YAKCG + +Y +F + A RD + + +M+ G + HGR EA
Sbjct: 594 IIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEA 652
Query: 283 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 342
L +Y M E + PD V +LTAC HAGL+ G ++++S+ +G++P + Y ++
Sbjct: 653 LMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVD 712
Query: 343 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAP 402
L+ R G++ DA FV ++PVEPN IWG L+ C + D+ LL+ + +
Sbjct: 713 LIARGGRLDDAYSFVTQMPVEPNANIWGTLLRAC-TTYNRMDLGHSVANHLLQAESDDTG 771
Query: 403 GHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVED 462
HV + N+YAA+ + + LR M+ K ++K GCSW+ V G+ +VF SGD P +
Sbjct: 772 NHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDS 831
Query: 463 IL 464
I
Sbjct: 832 IF 833
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 160/372 (43%), Gaps = 56/372 (15%)
Query: 12 EEALLLFLQMTLSDS-KPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRL 70
E + F M +D KP+ TF + C L Y G+ +H+ +I G + D G
Sbjct: 103 RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGN- 161
Query: 71 RRSLVRMYSVFGLM-DYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF------ 123
+LV MY+ FG + A A +G + + D S N++I G+ + + A F
Sbjct: 162 --ALVSMYAKFGFIFPDAYTAFDG-IADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKE 218
Query: 124 DTVPIRNKIA-----------------------------------WTC--MISGYLSAGQ 146
T P IA + C ++S YL G+
Sbjct: 219 PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGR 278
Query: 147 VFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFG 205
+ +A LF M +D ++W +I+GY N +A LF ++ G SP + T +
Sbjct: 279 IEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILP 338
Query: 206 AMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
+ L G+++H ++ Y D + N+L+S YA+ G+ +Y FS M+ +D I
Sbjct: 339 VCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDII 398
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
SWN+++ +D + + L + +L + D+VT L +L C + + K E
Sbjct: 399 SWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE----- 453
Query: 325 VNSYGLQPGFDH 336
V+ Y ++ G H
Sbjct: 454 VHGYSVKAGLLH 465
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVLFGAMGSVA 211
+F M D + W +++G + E + F M A P + TFA++ +
Sbjct: 78 MFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI-DDSYRIFSNMAYRDKISWNSMI 270
G+ +H +K E D ++ N+LVSMYAK G I D+Y F +A +D +SWN++I
Sbjct: 137 DSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK------GWELFNSM 324
G S++ ++A + ML+ P+ T VL CA +DK G ++ + +
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS---MDKNIACRSGRQIHSYV 253
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
V LQ S+++ R G++++A R+
Sbjct: 254 VQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 46/258 (17%)
Query: 192 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 251
GF + F + A SV+ L GR LHG K + + S+++MYAKC +DD
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 252 YRIFSNMAYRDKISWNSMIMGLS-DHGRASEALTVYETMLEFG--LYPDTVTFLGVLTAC 308
++F M D + WN ++ GLS GR E + ++ M F P +VTF VL C
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAM-HFADEPKPSSVTFAIVLPLC 132
Query: 309 A-----------HAGLVDKGWE----LFNSMVNSYGLQPGF---DHYI------------ 338
H+ ++ G E + N++V+ Y + GF D Y
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYA-KFGFIFPDAYTAFDGIADKDVVS 191
Query: 339 --SIINLLGRAGKVKDA-EEFVLRL--PVEPNHAIWGALVGVCGLSKTDADVASRATKRL 393
+II + DA F L L P EPN+A ++ VC + D ++A R+ +++
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC--ASMDKNIACRSGRQI 249
Query: 394 LELDPLNA--PGHVALCN 409
+ HV +CN
Sbjct: 250 HSYVVQRSWLQTHVFVCN 267
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 150/464 (32%), Positives = 231/464 (49%), Gaps = 14/464 (3%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G NG +AL +F +M L+ PN T +S AC+ L G ++H+ + G
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D G SLV MYS G ++ A + ++ N D + NSMI GY QAG KA
Sbjct: 383 FIDDVLVGN---SLVDMYSKCGKLEDARKVFD-SVKNKDVYTWNSMITGYCQAGYCGKAY 438
Query: 121 ELF----DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP-----DRDSIAWTSMISG 171
ELF D N I W MISGY+ G +A DLF M R++ W +I+G
Sbjct: 439 ELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAG 498
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 231
Y+QN EA+ LF +M F P + T L A ++ R++HG ++ +
Sbjct: 499 YIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAI 558
Query: 232 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 291
++N+L YAK G+I+ S IF M +D I+WNS+I G HG AL ++ M
Sbjct: 559 HAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKT 618
Query: 292 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 351
G+ P+ T ++ A G VD+G ++F S+ N Y + P +H +++ L GRA +++
Sbjct: 619 QGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLE 678
Query: 352 DAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIY 411
+A +F+ + ++ IW + + C + D D+A A + L L+P N + IY
Sbjct: 679 EALQFIQEMNIQSETPIWESFLTGCRI-HGDIDMAIHAAENLFSLEPENTATESIVSQIY 737
Query: 412 AANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 455
A + K R ++K G SWI V+ +H F++GD+
Sbjct: 738 ALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQ 781
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 175/388 (45%), Gaps = 15/388 (3%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MIG ++ + E LF M P+ F + CA G+ +H+ +I G
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLG 211
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
R+ S++ +Y+ G +D+A+ + D + NS++ Y Q G+ E+A
Sbjct: 212 M---SSCLRVSNSILAVYAKCGELDFATKFFR-RMRERDVIAWNSVLLAYCQNGKHEEAV 267
Query: 121 ELFDTVPIRNK----IAWTCMISGYLSAGQVFKACDLFDSMPD----RDSIAWTSMISGY 172
EL + + W +I GY G+ A DL M D WT+MISG
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGL 327
Query: 173 VQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL 232
+ N + +A+ +F +M G P T A + ++QG ++H + VK + D+
Sbjct: 328 IHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV 387
Query: 233 ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF 292
++ NSLV MY+KCG+++D+ ++F ++ +D +WNSMI G G +A ++ M +
Sbjct: 388 LVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 293 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 352
L P+ +T+ +++ G + +LF M +Q + II + GK +
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDE 507
Query: 353 AEEFVLRLPVE---PNHAIWGALVGVCG 377
A E ++ PN +L+ C
Sbjct: 508 ALELFRKMQFSRFMPNSVTILSLLPACA 535
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 4/249 (1%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
T ++S Y G + A +FDSM +R+ W++MI Y + E LF MM G
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P + F + + ++ G+ +H + +K L + NS++++YAKCGE+D + +
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F M RD I+WNS+++ +G+ EA+ + + M + G+ P VT+ ++ G
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL---PVEPNHAIWGA 371
D +L M ++G+ + ++I+ L G A + ++ V PN +
Sbjct: 299 DAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 372 LVGVCGLSK 380
V C K
Sbjct: 358 AVSACSCLK 366
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 42/274 (15%)
Query: 174 QNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI 233
+N + EA + G T+ L + + GR LH + E D+
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA-RFGLFTEPDVF 116
Query: 234 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 293
+E L+SMYAKCG I D+ ++F +M R+ +W++MI S R E ++ M++ G
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 294 LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 353
+ PD F +L CA+ G V+ G ++ +S+V G+ SI+ + + G++
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL--- 232
Query: 354 EEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 413
D A++ +R+ E D + A V L Y
Sbjct: 233 ------------------------------DFATKFFRRMRERDVI-AWNSVLLA--YCQ 259
Query: 414 NDRHIELTSLRKEMRIKGVRKAPG-CSW-ILVKG 445
N +H E L KEM +G+ +PG +W IL+ G
Sbjct: 260 NGKHEEAVELVKEMEKEGI--SPGLVTWNILIGG 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 148/373 (39%), Gaps = 84/373 (22%)
Query: 26 SKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMD 85
SK T++ L +C +LGR LHA+ + + D + L+ MY+ G +
Sbjct: 77 SKVKRSTYLKLLESCIDSGSIHLGRILHARFGL----FTEPDVFVETKLLSMYAKCGCIA 132
Query: 86 YASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFD------TVP---IRNKIAWTC 136
A + ++ + + ++MI Y + + + +LF +P + KI C
Sbjct: 133 DARKVFD-SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGC 191
Query: 137 MISGYLSAGQVFK------------------------------ACDLFDSMPDRDSIAWT 166
G + AG+V A F M +RD IAW
Sbjct: 192 ANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWN 251
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 226
S++ Y QN EA+ L EM G SP T+ +L G + D
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA---------- 301
Query: 227 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 286
DL+ + + A D +W +MI GL +G +AL ++
Sbjct: 302 ---MDLMQKMETFGITA------------------DVFTWTAMISGLIHNGMRYQALDMF 340
Query: 287 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIIN 342
M G+ P+ VT + ++AC+ ++++G E V+S ++ GF + S+++
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSE-----VHSIAVKMGFIDDVLVGNSLVD 395
Query: 343 LLGRAGKVKDAEE 355
+ + GK++DA +
Sbjct: 396 MYSKCGKLEDARK 408
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 203/398 (51%), Gaps = 26/398 (6%)
Query: 70 LRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR 129
+RR LV SV L A A G+ + Q +++++ Y +L L D
Sbjct: 247 MRRGLVHPNSVTYLSALA--ACSGSQRIVEGQQIHALLWKYGIESELCIESALMDM---- 300
Query: 130 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 189
Y G + A +F+S + D ++ T ++ G QN EAI F M+
Sbjct: 301 -----------YSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Query: 190 AHGFSPLNGTFAVLFGAMGSVAYLDQ----GRQLHGMQVKTIYEYDLILENSLVSMYAKC 245
G + + G V+++D G+QLH + +K + + + N L++MY+KC
Sbjct: 350 QAGVEIDANVVSAVLG----VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKC 405
Query: 246 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 305
G++ DS +F M R+ +SWNSMI + HG AL +YE M + P VTFL +L
Sbjct: 406 GDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLL 465
Query: 306 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 365
AC+H GL+DKG EL N M +G++P +HY II++LGRAG +K+A+ F+ LP++P+
Sbjct: 466 HACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPD 525
Query: 366 HAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRK 425
IW AL+G C D +V A ++L + P ++ H+ + NIY++ + E K
Sbjct: 526 CKIWQALLGACSF-HGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIK 584
Query: 426 EMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
M+ GV K G S I ++ + H F D+L P E I
Sbjct: 585 RMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAI 622
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 124/242 (51%), Gaps = 10/242 (4%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I+ Y G +FD M R+ I T++ISG ++NEL + + LF M P
Sbjct: 196 LITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPN 255
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
+ T+ A + +G+Q+H + K E +L +E++L+ MY+KCG I+D++ IF
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
+ D++S +++GL+ +G EA+ + ML+ G+ D V++A +D
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA----NVVSAVLGVSFIDN 371
Query: 317 GWELFNSMVNSYGLQPGF--DHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
L ++S ++ F + +++ +IN+ + G + D++ R+P + N+ W ++
Sbjct: 372 SLGL-GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSM 429
Query: 373 VG 374
+
Sbjct: 430 IA 431
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 121/241 (50%), Gaps = 8/241 (3%)
Query: 118 KAQELFDTVPI---RNK-IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV 173
K E F+ V RN + W ++S Y G++ A LFD MP RD I+ + G++
Sbjct: 73 KNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFL 132
Query: 174 QNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL 232
+N L M+ G F + T ++ + + + +H + + + Y+ ++
Sbjct: 133 RNRETESGFVLLKRMLGSGGFD--HATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEI 190
Query: 233 ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF 292
+ N L++ Y KCG +F M++R+ I+ ++I GL ++ + L ++ M
Sbjct: 191 SVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRG 250
Query: 293 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 352
++P++VT+L L AC+ + + +G ++ ++++ YG++ +++++ + G ++D
Sbjct: 251 LVHPNSVTYLSALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIED 309
Query: 353 A 353
A
Sbjct: 310 A 310
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 142/501 (28%), Positives = 246/501 (49%), Gaps = 45/501 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ NG E L LF M P+ T S+ AC L LGR +HA +I G
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 61 WKLDDYDGRLRRSLVRMY----------SVFGLMDYA-----SNALEGNLNNF------- 98
+ +D + SL +MY +F M+ + + G NF
Sbjct: 328 FAVDI---SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID 384
Query: 99 ------------DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC----MISGYL 142
D+ ++ ++++ G L+ EL I++ +I+ Y
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 143 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
+ KA D+F ++P ++ I+WTS+I+G N EA+ +F M P T
Sbjct: 445 KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTA 503
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 262
A + L G+++H ++T D L N+L+ MY +CG ++ ++ F N +D
Sbjct: 504 ALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKD 562
Query: 263 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
SWN ++ G S+ G+ S + +++ M++ + PD +TF+ +L C+ + +V +G F+
Sbjct: 563 VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFS 622
Query: 323 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 382
M YG+ P HY +++LLGRAG++++A +F+ ++PV P+ A+WGAL+ C +
Sbjct: 623 KM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHK- 680
Query: 383 ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL 442
D+ + + + ELD + ++ LCN+YA + E+ +R+ M+ G+ GCSW+
Sbjct: 681 IDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVE 740
Query: 443 VKGRVHVFSSGDRLEPHVEDI 463
VKG+VH F S D+ P ++I
Sbjct: 741 VKGKVHAFLSDDKYHPQTKEI 761
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 156/366 (42%), Gaps = 90/366 (24%)
Query: 1 MIGGFAWNGFYEEALLLFLQMT-LSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
++GG+A G+++EA+ L+ +M + KP+ TF + C G+ G+++H ++
Sbjct: 166 LVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRY 225
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
G++LD +D +N++I YV+ G ++ A
Sbjct: 226 GYELD-------------------IDV----------------VNALITMYVKCGDVKSA 250
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWTSMISGYVQN 175
+ LFD +P R+ I+W MISGY G + +LF +M D D + TS+IS
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS----- 305
Query: 176 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE 235
A L G+ GR +H + T + D+ +
Sbjct: 306 -----ACELLGDRRL-------------------------GRDIHAYVITTGFAVDISVC 335
Query: 236 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 295
NSL MY G ++ ++FS M +D +SW +MI G + +A+ Y M + +
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 296 PDTVTFLGVLTACAHAGLVDKGWELF---------------NSMVNSYGLQPGFDHYISI 340
PD +T VL+ACA G +D G EL N+++N Y D + I
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 341 INLLGR 346
+ + R
Sbjct: 456 FHNIPR 461
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 10/225 (4%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGT 199
++ G + A +F M +R+ +W ++ GY + EA+ L+ M+ G P T
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
F + G + L +G+++H V+ YE D+ + N+L++MY KCG++ + +F M
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
RD ISWN+MI G ++G E L ++ M + PD +T V++AC G G +
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGR----AGKVKDAEEFVLRL 360
+++Y + GF IS+ N L + AG ++AE+ R+
Sbjct: 319 -----IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 3/206 (1%)
Query: 169 ISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIY 228
+ G N + EA+ L M + F L ++G +++ + + ++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 229 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 288
+ L N+ ++M+ + G + D++ +F M+ R+ SWN ++ G + G EA+ +Y
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 289 MLEF-GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA 347
ML G+ PD TF VL C + +G E+ +V YG + D ++I + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKC 244
Query: 348 GKVKDAEEFVLRLPVEPNHAIWGALV 373
G VK A R+P + W A++
Sbjct: 245 GDVKSARLLFDRMP-RRDIISWNAMI 269
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/475 (30%), Positives = 232/475 (48%), Gaps = 57/475 (12%)
Query: 11 YEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRL 70
Y + LLL+ +M + + AC GL G +H + NG DDY +
Sbjct: 90 YSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDY---V 146
Query: 71 RRSLVRMYSVFGLMDYASNALEGNLNNFDDQSL-NSMINGYVQAGQLE--KAQELF---- 123
SLV MY+ G M+ A FD+ + NS++ G + G L+ K E+F
Sbjct: 147 APSLVEMYAQLGTMESAQKV-------FDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFC 199
Query: 124 ---DTVPIRNKIAWTCMIS--GYLSAGQVFK----------------------------- 149
DT + + C++ G + AG+V K
Sbjct: 200 LMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC 259
Query: 150 -----ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
A LF++ DR+ + WT++ISG+ + E EA LF +M+ P T A +
Sbjct: 260 RLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAIL 319
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
+ S+ L G+ +HG ++ E D + S + MYA+CG I + +F M R+ I
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVI 379
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
SW+SMI +G EAL + M + P++VTF+ +L+AC+H+G V +GW+ F SM
Sbjct: 380 SWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 384
YG+ P +HY +++LLGRAG++ +A+ F+ +PV+P + WGAL+ C + K + D
Sbjct: 440 TRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHK-EVD 498
Query: 385 VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 439
+A ++LL ++P + +V L NIYA + +R++M IKG RK G S
Sbjct: 499 LAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 139/305 (45%), Gaps = 52/305 (17%)
Query: 95 LNNFDDQSL--NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACD 152
++ F+D+ + +S+ N Y+Q+ +L+ A F+ +P W
Sbjct: 32 IHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIP-----CW------------------ 68
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELI--AEAISLFGEMMAH--GFSPLNGTFAVLFGAMG 208
R+ +W +++SGY +++ ++ + L+ M H G N FA+ A
Sbjct: 69 ------KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAI--KACV 120
Query: 209 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 268
+ L+ G +HG+ +K + D + SLV MYA+ G ++ + ++F + R+ + W
Sbjct: 121 GLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGV 180
Query: 269 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH--AGLVDK---GWELFNS 323
++ G + + E ++ M + GL D +T + ++ AC + AG V K G + S
Sbjct: 181 LMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRS 240
Query: 324 MVN-SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 382
++ S LQ SII++ + + +A + + V+ N +W L+ G +K +
Sbjct: 241 FIDQSDYLQA------SIIDMYVKCRLLDNARK-LFETSVDRNVVMWTTLIS--GFAKCE 291
Query: 383 ADVAS 387
V +
Sbjct: 292 RAVEA 296
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 129/345 (37%), Gaps = 84/345 (24%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I GFA EA LF QM PN T ++ +C+ L G+ +H +I NG
Sbjct: 283 LISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG 342
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++D + S I+ Y + G ++ A+
Sbjct: 343 IEMDAVN-----------------------------------FTSFIDMYARCGNIQMAR 367
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+FD +P RN I+W+ MI+ + G L E
Sbjct: 368 TVFDMMPERNVISWSSMINAFGING-------------------------------LFEE 396
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG-RQLHGMQVKTIYEYDLILENS-- 237
A+ F +M + P + TF L A + +G +Q M +Y ++ E
Sbjct: 397 ALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMT----RDYGVVPEEEHY 452
Query: 238 --LVSMYAKCGEIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHGRASEALTVYETMLEFGL 294
+V + + GEI ++ NM + S W +++ H A + E +L +
Sbjct: 453 ACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLL--SM 510
Query: 295 YPDTVTFLGVLTAC-AHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
P+ + +L+ A AG+ WE+ N + G++ G+ ++
Sbjct: 511 EPEKSSVYVLLSNIYADAGM----WEMVNCVRRKMGIK-GYRKHV 550
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 243/505 (48%), Gaps = 47/505 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTL--SDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIV 58
M+GGF+ G + QM D K + T ++ C SF ++LH +
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Query: 59 NGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG---- 114
+ Y+ + + V Y+ G + YA G + + S N++I G+ Q+
Sbjct: 424 QEFV---YNELVANAFVASYAKCGSLSYAQRVFHG-IRSKTVNSWNALIGGHAQSNDPRL 479
Query: 115 ------QLEKAQELFDTVPI-----------------------------RNKIAWTCMIS 139
Q++ + L D+ + R+ + ++S
Sbjct: 480 SLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLS 539
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y+ G++ LFD+M D+ ++W ++I+GY+QN A+ +F +M+ +G +
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGIS 599
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+FGA + L GR+ H +K + E D + SL+ MYAK G I S ++F+ +
Sbjct: 600 MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 659
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
+ SWN+MIMG HG A EA+ ++E M G PD +TFLGVLTAC H+GL+ +G
Sbjct: 660 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR 719
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL-RLPVEPNHAIWGALVGVCGL 378
+ M +S+GL+P HY +I++LGRAG++ A V + E + IW +L+ C +
Sbjct: 720 YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRI 779
Query: 379 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
+ + ++ + +L EL+P +V L N+YA + ++ +R+ M +RK GC
Sbjct: 780 HQ-NLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 838
Query: 439 SWILVKGRVHVFSSGDRLEPHVEDI 463
SWI + +V F G+R E+I
Sbjct: 839 SWIELNRKVFSFVVGERFLDGFEEI 863
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 195/464 (42%), Gaps = 68/464 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSK----PNGETFISLAYACAGLSFPYLGRQLHAQL 56
MI F+ NGF EE+ LL +M + P+ T +++ CA LG+ +H
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH--- 315
Query: 57 IVNGWKLD---DYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGY--- 110
GW + D + L +L+ MYS G + A + N NN + S N+M+ G+
Sbjct: 316 ---GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN-NNKNVVSWNTMVGGFSAE 371
Query: 111 -------------VQAGQLEKAQE--LFDTVP-----------------------IRNKI 132
+ G+ KA E + + VP + N++
Sbjct: 372 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 431
Query: 133 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 192
++ Y G + A +F + + +W ++I G+ Q+ ++ +M G
Sbjct: 432 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG 491
Query: 193 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 252
P + T L A + L G+++HG ++ E DL + S++S+Y CGE+
Sbjct: 492 LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQ 551
Query: 253 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 312
+F M + +SWN++I G +G AL V+ M+ +G+ ++ + V AC+
Sbjct: 552 ALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 611
Query: 313 LVDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAI 368
+ G E ++Y L+ D +I S+I++ + G + + + L E + A
Sbjct: 612 SLRLGRE-----AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTAS 665
Query: 369 WGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 409
W A++ G+ GL+K + + D L G + CN
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH----G 192
++S Y + G V A LFD MP+R+ ++W SMI + N E+ L GEMM
Sbjct: 228 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287
Query: 193 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 252
F P T + + G+ +HG VK + +L+L N+L+ MY+KCG I ++
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 253 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG--LYPDTVTFLGVLTACAH 310
IF ++ +SWN+M+ G S G V ML G + D VT L + C H
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 311 AGLVDKGWELFNSMVNSYGLQPGF 334
+ EL + Y L+ F
Sbjct: 408 ESFLPSLKEL-----HCYSLKQEF 426
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 16/260 (6%)
Query: 125 TVPIRNK-IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS 183
+ +RN + T +I+ Y G + +FD++ ++ W ++IS Y +NEL E +
Sbjct: 113 STRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172
Query: 184 LFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMY 242
F EM++ P + T+ + A ++ + G +HG+ VKT D+ + N+LVS Y
Sbjct: 173 TFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY 232
Query: 243 AKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF----GLYPDT 298
G + D+ ++F M R+ +SWNSMI SD+G + E+ + M+E PD
Sbjct: 233 GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV 292
Query: 299 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAE 354
T + VL CA + G V+ + ++ D + +++++ + G + +A
Sbjct: 293 ATLVTVLPVCAREREIGLG-----KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA- 346
Query: 355 EFVLRLPVEPNHAIWGALVG 374
+ + ++ N W +VG
Sbjct: 347 QMIFKMNNNKNVVSWNTMVG 366
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 165/396 (41%), Gaps = 51/396 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQM-TLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
+I ++ N Y+E L F++M + +D P+ T+ + ACAG+S +G +H ++
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNAL----EGNL------------NNFDDQS- 102
G D + G +LV Y G + A E NL N F ++S
Sbjct: 217 GLVEDVFVGN---ALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 103 --LNSMINGYVQAGQLEKAQELFDTVPI-----------------------RNKIAWTCM 137
L M+ + L +P+ + + +
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 138 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
+ Y G + A +F +++ ++W +M+ G+ + +M+A G +
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG-EDVK 392
Query: 198 GTFAVLFGAMGSV---AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
+ A+ ++L ++LH +K + Y+ ++ N+ V+ YAKCG + + R+
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F + + SWN++I G + +L + M GL PD+ T +L+AC+ +
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSL 512
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV 350
G E+ ++ ++ L+ Y+S+++L G++
Sbjct: 513 RLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGEL 547
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 187 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM-QVKTIYEYDLILENSLVSMYAKC 245
E + F + +L A G ++ GR++H + T D +L +++MYA C
Sbjct: 74 ESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC 133
Query: 246 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE-FGLYPDTVTFLGV 304
G DDS +F + ++ WN++I S + E L + M+ L PD T+ V
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 305 LTACAHAGLVDKGWEL-FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 363
+ AC AG+ D G L + +V GL ++++ G G V DA + +P E
Sbjct: 194 IKAC--AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-E 250
Query: 364 PNHAIWGALVGV 375
N W +++ V
Sbjct: 251 RNLVSWNSMIRV 262
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 239/504 (47%), Gaps = 47/504 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI +A G ++A+ LF M S KP + +L + GRQ+HA +I G
Sbjct: 155 MISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG 214
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ + +V MY G + A + + + ++ GY QAG+ A
Sbjct: 215 LC---SNTSIETGIVNMYVKCGWLVGAKRVFD-QMAVKKPVACTGLMVGYTQAGRARDAL 270
Query: 121 ELFDTVPIRNKIAW----------------------------------------TCMISG 140
+LF + + + W T ++
Sbjct: 271 KLFVDL-VTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDF 329
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-T 199
Y+ AC F + + + ++W+++ISGY Q EA+ F + + S LN T
Sbjct: 330 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFT 389
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ +F A +A + G Q+H +K E++L++MY+KCG +DD+ +F +M
Sbjct: 390 YTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD 449
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
D ++W + I G + +G ASEAL ++E M+ G+ P++VTF+ VLTAC+HAGLV++G
Sbjct: 450 NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 509
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
++M+ Y + P DHY +I++ R+G + +A +F+ +P EP+ W + C
Sbjct: 510 CLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTH 569
Query: 380 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 439
K + ++ A + L +LDP + G+V N+Y + E + K M + ++K CS
Sbjct: 570 K-NLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCS 628
Query: 440 WILVKGRVHVFSSGDRLEPHVEDI 463
WI KG++H F GD+ P ++I
Sbjct: 629 WIQEKGKIHRFIVGDKHHPQTQEI 652
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 140/281 (49%), Gaps = 6/281 (2%)
Query: 136 CMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 195
C++ Y + A LFD M + ++++ T+MIS Y + ++ +A+ LF M+A G P
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 196 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 255
+ + L ++ + LD GRQ+H ++ + +E +V+MY KCG + + R+F
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 256 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 315
MA + ++ +++G + GRA +AL ++ ++ G+ D+ F VL ACA ++
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELN 302
Query: 316 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-G 374
G ++ ++ V GL+ +++ + + A + EPN W A++ G
Sbjct: 303 LGKQI-HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISG 360
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVAL---CNIYA 412
C +S+ + V + + R LN+ + ++ C++ A
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLA 401
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
EA EM G S + ++ LF A + L GR LH I ++L+N ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
MY +C ++D+ ++F M+ + +S +MI ++ G +A+ ++ ML G P +
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
+ +L + + +D G ++ ++ + GL I+N+ + G + A+ +
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRA-GLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 396
+ V+ A G +VG T A A A K ++L
Sbjct: 245 MAVKKPVACTGLMVGY-----TQAGRARDALKLFVDL 276
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 157/507 (30%), Positives = 256/507 (50%), Gaps = 49/507 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGE-TFISLAYACAGLSFPYLGRQLHAQLIVN 59
MIG + N E++ LFL+ S + E T++ A A + L LGRQ H + N
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG----- 114
+L + SL+ MYS G + + S + ++ D S N+MI+ +VQ G
Sbjct: 348 FRELPIV---IVNSLMVMYSRCGSV-HKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 115 -----QLEKAQELFDTVPI----------RNK--------------IAWTCM----ISGY 141
+++K D + + RNK I + M I Y
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMY 463
Query: 142 LSAGQVFKACDLFDS--MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
+G + + LF+ +RD W SMISGY QN + +F +M+ P T
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
A + A + +D G+QLHG ++ + ++ + ++LV MY+K G I + +FS
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
R+ +++ +MI+G HG A++++ +M E G+ PD +TF+ VL+AC+++GL+D+G +
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLK 643
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA-IWGALVGVCGL 378
+F M Y +QP +HY I ++LGR G+V +A EFV L E N A +WG+L+G C L
Sbjct: 644 IFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKL 703
Query: 379 SKTDADVASRATKRLLELDP-LNAPGH-VALCNIYAANDRHIELTSLRKEMRIKGVRKAP 436
+ ++A ++RL + D N G+ V L N+YA + + +R+ MR KG++K
Sbjct: 704 -HGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEV 762
Query: 437 GCSWILVKGRVHVFSSGDRLEPHVEDI 463
G S I + G V+ F S D+ PH +I
Sbjct: 763 GRSGIEIAGYVNCFVSRDQEHPHSSEI 789
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 187/424 (44%), Gaps = 57/424 (13%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGE--TFISLAYACAGLSFPYLGRQLHAQLIV 58
+I GF N EALL + +M + N + T+ S ACA G+ +H LI
Sbjct: 76 IIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLI- 134
Query: 59 NGWKLDDYDGRLRRSLVRMY-SVFGLMD-YASNALEGNLNNFDDQSL---NSMINGYVQA 113
L + + SL+ MY S D + + + +N +++ N++I+ YV+
Sbjct: 135 --RCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKT 192
Query: 114 GQLEKAQE-------------------LFDTVPIRNKI---------------------- 132
G+ +A +F V I I
Sbjct: 193 GRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLF 252
Query: 133 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AH 191
+ IS Y G + + +FDS +R+ W +MI YVQN+ + E+I LF E + +
Sbjct: 253 VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSK 312
Query: 192 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 251
T+ + A+ ++ ++ GRQ HG K E +++ NSL+ MY++CG + S
Sbjct: 313 EIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKS 372
Query: 252 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
+ +F +M RD +SWN+MI +G E L + M + G D +T +L+A ++
Sbjct: 373 FGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNL 432
Query: 312 GLVDKGWELFNSMVNSYGLQ-PGFDHYISIINLLGRAGKVKDAEE-FVLRLPVEPNHAIW 369
+ G + ++ G+Q G + Y +I++ ++G ++ +++ F E + A W
Sbjct: 433 RNKEIGKQTHAFLIRQ-GIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQATW 489
Query: 370 GALV 373
+++
Sbjct: 490 NSMI 493
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 120/262 (45%), Gaps = 18/262 (6%)
Query: 124 DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS 183
T IR++++ C G A LFD++P ++ W ++I G++ N L EA+
Sbjct: 38 QTPSIRSRLSKIC------QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALL 91
Query: 184 LFGEMMAHG-FSPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 241
+ M F+ + T++ A L G+ +H ++ + ++ NSL++M
Sbjct: 92 FYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNM 151
Query: 242 YAKCGEIDDSY------RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 295
Y C D + ++F NM ++ ++WN++I GR +EA + M+ +
Sbjct: 152 YVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVK 211
Query: 296 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDA 353
P V+F+ V A + + + K +F ++ G + D ++ S I++ G ++ +
Sbjct: 212 PSPVSFVNVFPAVSISRSIKKA-NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 354 EEFVLRLPVEPNHAIWGALVGV 375
V VE N +W ++GV
Sbjct: 271 RR-VFDSCVERNIEVWNTMIGV 291
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 220/420 (52%), Gaps = 13/420 (3%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MIG A NG+Y+E+L F +M K + SL A L G+ +H ++
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS 147
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ D + + SL+ MYS FG + A +L D N+MI+GY Q ++A
Sbjct: 148 YESDAF---IVSSLIDMYSKFGEVGNARKVF-SDLGEQDLVVFNAMISGYANNSQADEAL 203
Query: 121 ELFDTVPI----RNKIAWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWTSMISGY 172
L + + + I W +ISG+ K ++ + M D ++WTS+ISG
Sbjct: 204 NLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGL 263
Query: 173 VQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL 232
V N +A F +M+ HG P + T L A ++AY+ G+++HG V T E
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG 323
Query: 233 ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF 292
+ ++L+ MY KCG I ++ +F + +++NSMI ++HG A +A+ +++ M
Sbjct: 324 FVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEAT 383
Query: 293 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 352
G D +TF +LTAC+HAGL D G LF M N Y + P +HY +++LLGRAGK+ +
Sbjct: 384 GEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVE 443
Query: 353 AEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYA 412
A E + + +EP+ +WGAL+ C + + ++A A K L EL+P N+ + L ++YA
Sbjct: 444 AYEMIKAMRMEPDLFVWGALLAACR-NHGNMELARIAAKHLAELEPENSGNGLLLTSLYA 502
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 122/243 (50%), Gaps = 4/243 (1%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+++ Y+ G+V A +FD MP RD MI +N E++ F EM G
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
L A ++ + G+ +H + +K YE D + +SL+ MY+K GE+ ++ ++FS
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
++ +D + +N+MI G +++ +A EAL + + M G+ PD +T+ +++ +H +K
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLG---RAGKVKDAEEFVLRLPVEPNHAIWGALV 373
E+ M G +P + SII+ L + K DA + +L + PN A L+
Sbjct: 237 VSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLL 295
Query: 374 GVC 376
C
Sbjct: 296 PAC 298
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 244/510 (47%), Gaps = 56/510 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I GF NG +A+ + +M + P+ TF SL + + +++H G
Sbjct: 132 LISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLG 190
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSL-NSMINGYVQAGQLEKA 119
+ D Y G LV YS F ++ A + L + DD L N+++NGY Q + E A
Sbjct: 191 FDSDCYVGS---GLVTSYSKFMSVEDAQKVFD-ELPDRDDSVLWNALVNGYSQIFRFEDA 246
Query: 120 QELFDTVPIR----NKIAWTCMISGYLSAGQV---------------------------- 147
+F + ++ T ++S + +G +
Sbjct: 247 LLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDM 306
Query: 148 -------FKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
+A +F++M +RD W S++ + ++LF M+ G P T
Sbjct: 307 YGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTL 366
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQV-------KTIYEYDLILENSLVSMYAKCGEIDDSYR 253
+ G +A L QGR++HG + K+ E+ + NSL+ MY KCG++ D+
Sbjct: 367 TTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEF---IHNSLMDMYVKCGDLRDARM 423
Query: 254 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 313
+F +M +D SWN MI G AL ++ M G+ PD +TF+G+L AC+H+G
Sbjct: 424 VFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGF 483
Query: 314 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+++G M Y + P DHY +I++LGRA K+++A E + P+ N +W +++
Sbjct: 484 LNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
Query: 374 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 433
C L + D+A A KRL EL+P + G+V + N+Y ++ E+ +R MR + V+
Sbjct: 544 SSCRL-HGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVK 602
Query: 434 KAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
K PGCSWI++K VH F +G++ P + I
Sbjct: 603 KTPGCSWIVLKNGVHTFFTGNQTHPEFKSI 632
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 114/224 (50%), Gaps = 8/224 (3%)
Query: 133 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 192
A T +++ Y G + +A +F +RD + ++ISG+V N +A+ + EM A+G
Sbjct: 98 AGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANG 156
Query: 193 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 252
P TF L ++ D +++HG+ K ++ D + + LV+ Y+K ++D+
Sbjct: 157 ILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQ 215
Query: 253 RIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
++F + R D + WN+++ G S R +AL V+ M E G+ T VL+A +
Sbjct: 216 KVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVS 275
Query: 312 GLVDKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDA 353
G +D G + V + G D +S +I++ G++ +++A
Sbjct: 276 GDIDNGRSIHGLAVKT---GSGSDIVVSNALIDMYGKSKWLEEA 316
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 239/505 (47%), Gaps = 46/505 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M+ +A N + AL LF M P+ T ++ C+ L G+ +HA+L
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ + +L+ +YS G D + + ++ D + S+I+G + G+ ++A
Sbjct: 404 IQ---STSTIESALLTLYSKCGC-DPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEAL 459
Query: 121 ELF-----------------------------------------DTVPIRNKIAWTCMIS 139
++F T + N + +I
Sbjct: 460 KVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLID 519
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y G A +F SM + +AW SMIS Y +N L +I LF M++ G P + +
Sbjct: 520 LYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVS 579
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ A+ S A L +G+ LHG ++ D L+N+L+ MY KCG + IF M
Sbjct: 580 ITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ 639
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
++ I+WN MI G HG AL++++ M + G PD VTFL +++AC H+G V++G
Sbjct: 640 HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKN 699
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
+F M YG++P +HY ++++LLGRAG +++A F+ +P+E + +IW L+ +
Sbjct: 700 IFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSA-SRT 758
Query: 380 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 439
+ ++ + ++LL ++P +V L N+Y E L M+ KG+ K PGCS
Sbjct: 759 HHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCS 818
Query: 440 WILVKGRVHVFSSGDRLEPHVEDIL 464
WI V R +VF SG P +I
Sbjct: 819 WIEVSDRTNVFFSGGSSSPMKAEIF 843
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 165/398 (41%), Gaps = 62/398 (15%)
Query: 32 TFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNAL 91
TF SL AC+ L+ G+ +H ++V GW+ YD + SLV MY G +DYA
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWR---YDPFIATSLVNMYVKCGFLDYAVQVF 118
Query: 92 EG------NLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI----------------- 128
+G ++ D NSMI+GY + + ++ F + +
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178
Query: 129 -------------------RNKIAW-----TCMISGYLSAGQVFKACDLFDSMPDRDSIA 164
RN + T +I Y G A +F + D+ ++
Sbjct: 179 CKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 165 -WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
W MI G+ + + ++ L+ + ++ +F GA GRQ+H
Sbjct: 239 LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
VK D + SL+SMY+KCG + ++ +FS + + WN+M+ +++ AL
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL 358
Query: 284 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG----WELFNSMVNSYGLQPGFDHYIS 339
++ M + + PD+ T V++ C+ GL + G ELF + S +
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES-----A 413
Query: 340 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVC 376
++ L + G DA V + E + WG+L+ G+C
Sbjct: 414 LLTLYSKCGCDPDA-YLVFKSMEEKDMVAWGSLISGLC 450
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 178/416 (42%), Gaps = 48/416 (11%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETF-ISLAYACAGLSFPYL-GRQLHAQLIV 58
MI G+ ++E + F +M + +P+ + I ++ C +F G+Q+H ++
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 59 NGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEK 118
N D D L+ +L+ MY FGL A + + N MI G+ +G E
Sbjct: 199 NSL---DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 119 AQELF------------------------------------DTVPI---RNKIAWTCMIS 139
+ +L+ D V + + T ++S
Sbjct: 256 SLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLS 315
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y G V +A +F + D+ W +M++ Y +N+ A+ LFG M P + T
Sbjct: 316 MYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFT 375
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ + + + G+ +H K + +E++L+++Y+KCG D+Y +F +M
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLTACAHAGLVDKG 317
+D ++W S+I GL +G+ EAL V+ M + L PD+ V ACA + G
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 318 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
++ SM+ + GL S+I+L + G + A + + E N W +++
Sbjct: 496 LQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI 549
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 23/228 (10%)
Query: 199 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF--- 255
TF L A ++ L G+ +HG V + YD + SLV+MY KCG +D + ++F
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 256 ----SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
S ++ RD WNSMI G R E + + ML FG+ PD + V++
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 312 GLVDK-------GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP 364
G + G+ L NS+ L+ ++I++ + G DA + + +
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKT------ALIDMYFKFGLSIDAWRVFVEIEDKS 235
Query: 365 NHAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 409
N +W ++ G G+ ++ D+ A ++L + G + C+
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 231/487 (47%), Gaps = 48/487 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ NG+ +AL++F M + T +S+ C L +GR +H +V
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK--LVEE 246
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+L D ++ +LV MY G MD A + + D + MINGY + G +E A
Sbjct: 247 KRLGD-KIEVKNALVNMYLKCGRMDEARFVFD-RMERRDVITWTCMINGYTEDGDVENAL 304
Query: 121 EL-----FDTV-----------------------------PIRNK-----IAWTCMISGY 141
EL F+ V +R + I T +IS Y
Sbjct: 305 ELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
+V +F + W+++I+G VQNEL+++A+ LF M P T
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--- 258
L A ++A L Q +H KT + L LV +Y+KCG ++ +++IF+ +
Sbjct: 425 SLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK 484
Query: 259 -AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
+D + W ++I G HG AL V+ M+ G+ P+ +TF L AC+H+GLV++G
Sbjct: 485 HKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Query: 318 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 377
LF M+ Y +HY I++LLGRAG++ +A + +P EP +WGAL+ C
Sbjct: 545 LTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAAC- 603
Query: 378 LSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 437
++ + + A +L EL+P N +V L NIYAA R ++ +R M G+RK PG
Sbjct: 604 VTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPG 663
Query: 438 CSWILVK 444
S I ++
Sbjct: 664 HSTIEIR 670
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 157/337 (46%), Gaps = 22/337 (6%)
Query: 129 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 188
R+K +++ Y++ G+V A D+FD M +RD I+W +MISGY +N + +A+ +F M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 189 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 248
+ + T + G + L+ GR +H + + + ++N+LV+MY KCG +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 249 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 308
D++ +F M RD I+W MI G ++ G AL + M G+ P+ VT +++ C
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 309 AHAGLVD-----KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 363
A V+ GW + + + ++ S+I++ + +V D V +
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIET------SLISMYAKCKRV-DLCFRVFSGASK 382
Query: 364 PNHAIWGALVGVCGLSKTDADVASRATK-RLLELDPLNAPGHVALCNIYAANDRHIELTS 422
+ W A++ C ++ +D + R +++P N +L YAA L
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEP-NIATLNSLLPAYAA------LAD 435
Query: 423 LRKEMRIKGVRKAPG--CSWILVKGRVHVFSSGDRLE 457
LR+ M I G S G VHV+S LE
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLE 472
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 143/316 (45%), Gaps = 40/316 (12%)
Query: 101 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIA---WTCMISGYLSAGQVFKACDLFDSM 157
+ S++N + + K + L V +++ + + Y G + A LF+ M
Sbjct: 16 KQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEM 75
Query: 158 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS--PLNGTFAVLFGAMGSVAYLDQ 215
P +++ +I YV+ L +AIS+F M++ G P T+ + A G + +
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 275
G +HG +++ + D ++N+L++MY G+++ + +F M RD ISWN+MI G
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW---------------EL 320
+G ++AL +++ M+ + D T + +L C H ++ G E+
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 321 FNSMVNSYGLQPG--------FDH--------YISIINLLGRAGKVKDAEEFVLRLP--- 361
N++VN Y L+ G FD + +IN G V++A E +
Sbjct: 256 KNALVNMY-LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 362 VEPNHAIWGALVGVCG 377
V PN +LV VCG
Sbjct: 315 VRPNAVTIASLVSVCG 330
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 191/343 (55%), Gaps = 6/343 (1%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
+++ Y+ G + A ++FD +P RN + W MI+G + G KA + MP+R +
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
+WT++I GY + + EAI LF M+A P T + A+ ++ L +H
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 223 QVKT-IYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--AYRDKISWNSMIMGLSDHGRA 279
K D+ + NSL+ YAKCG I +++ F + ++ +SW +MI + HG
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMG 341
Query: 280 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW-ELFNSMVNSYGLQPGFDHYI 338
EA+++++ M GL P+ VT + VL AC+H GL ++ + E FN+MVN Y + P HY
Sbjct: 342 KEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYG 401
Query: 339 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 398
++++L R G++++AE+ L +P+E +W L+G C + DA++A R T++L+EL+
Sbjct: 402 CLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYD-DAELAERVTRKLMELER 460
Query: 399 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
+ +V + NI+ R ++ RK+M ++GV K PG S +
Sbjct: 461 SHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 228 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYE 287
+E + ++ +LV MY G + D++++F M R+ ++WN MI GL++ G +AL E
Sbjct: 154 FESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLE 213
Query: 288 TMLEFGLYPD--TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 345
M P+ V++ ++ A + LF+ MV ++P ++I+ +
Sbjct: 214 KM------PNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVW 267
Query: 346 RAGKVK 351
G +K
Sbjct: 268 NLGDLK 273
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 253/504 (50%), Gaps = 76/504 (15%)
Query: 11 YEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRL 70
++E + +++ M S P+ S+ AC + G+ +HAQ + NG Y +
Sbjct: 85 FKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVY---V 141
Query: 71 RRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRN 130
+ LV +YS G ++ A A + ++ + S NS+++GY+++G+L++A+ +FD +P ++
Sbjct: 142 QTGLVGLYSRLGYIELAKKAFD-DIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKD 200
Query: 131 KIAWTCMISGYLSAGQVFKACDLF-------------------------------DSMPD 159
++W +IS Y G + AC LF D+MP
Sbjct: 201 AVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQ 260
Query: 160 RDSIAWTSMISGYV-------------------------------QNELIAEAISLFGEM 188
++ ++W +MISGY QN +A+ LF +M
Sbjct: 261 KNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQM 320
Query: 189 MAHG--FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
+ P T + + A + G + + + D +L SL+ +Y K G
Sbjct: 321 LERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGG 380
Query: 247 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 306
+ ++++FSN+ +D +S+++MIMG +G A+EA +++ M+E + P+ VTF G+L+
Sbjct: 381 DFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLS 440
Query: 307 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 366
A +H+GLV +G++ FNSM + L+P DHY ++++LGRAG++++A E + +P++PN
Sbjct: 441 AYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNA 499
Query: 367 AIWGALVGVCGLSKTD--ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLR 424
+WGAL+ GL ++A + LE DP H+A+ IY++ R + ++R
Sbjct: 500 GVWGALLLASGLHNNVEFGEIACSHCVK-LETDPTGYLSHLAM--IYSSVGRWDDARTVR 556
Query: 425 KEMRIKGVRKAPGCSWILVKGRVH 448
++ K + K GCSW V+G H
Sbjct: 557 DSIKEKKLCKTLGCSW--VEGSYH 578
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 127/283 (44%), Gaps = 32/283 (11%)
Query: 160 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
DS +W ++ Q+ E + ++ +M G P + + A G + + G+ +
Sbjct: 67 HDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 220 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 279
H +K + ++ LV +Y++ G I+ + + F ++A ++ +SWNS++ G + G
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 280 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM--------------- 324
EA V++ + E D V++ ++++ A G + LF++M
Sbjct: 187 DEARRVFDKIPE----KDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGY 242
Query: 325 VNSYGLQPG---FD--------HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
VN ++ FD +I++I+ + G V+ AEE + RL + + ++ A++
Sbjct: 243 VNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEE-LFRLMSKKDKLVYDAMI 301
Query: 374 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 416
C A + ++LE + P + L ++ +AN +
Sbjct: 302 A-CYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 343
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/431 (19%), Positives = 170/431 (39%), Gaps = 73/431 (16%)
Query: 49 GRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFG--LMDYASNALEGNLNNFDDQSLNSM 106
+Q+HAQL+VN + + + L + F ++ Y L+G N D S +
Sbjct: 19 AKQVHAQLVVN--RYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKG-FNGHDSFSWGCL 75
Query: 107 INGYVQAGQLE-----------------------------KAQELFDTVPIRNKI----- 132
+ Q + + K + + D PI +
Sbjct: 76 VRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGL 135
Query: 133 -----AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 187
T ++ Y G + A FD + ++++++W S++ GY+++ + EA +F +
Sbjct: 136 CGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDK 195
Query: 188 MMAHGFSPLN------------GTFAVLFGAMGSVAYLDQGRQLHG------MQVKTIYE 229
+ N G LF AM + + G M++ Y
Sbjct: 196 IPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYF 255
Query: 230 YDLILEN-----SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 284
+ +N +++S Y K G++ + +F M+ +DK+ +++MI + +G+ +AL
Sbjct: 256 DAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALK 315
Query: 285 VYETMLEFGLY--PDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGFDHYISII 341
++ MLE Y PD +T V++A + G G W S + +G++ S+I
Sbjct: 316 LFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW--VESYITEHGIKIDDLLSTSLI 373
Query: 342 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 401
+L + G A + L + + + A++ CG++ + S T + + P N
Sbjct: 374 DLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNV 432
Query: 402 PGHVALCNIYA 412
L + Y+
Sbjct: 433 VTFTGLLSAYS 443
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 198/329 (60%), Gaps = 2/329 (0%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+ ++ Y G++ A +FD MP R+ + W+ M+ GY Q EA+ LF E + +
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
+ +F+ + + L+ GRQ+HG+ +K+ ++ + +SLVS+Y+KCG + +Y++
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F+ + ++ WN+M+ + H + + +++ M G+ P+ +TFL VL AC+HAGLV
Sbjct: 275 FNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
D+G F+ M S ++P HY S++++LGRAG++++A E + +P++P ++WGAL+
Sbjct: 335 DEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 434
C + K + ++A+ A ++ EL P+++ H++L N YAA+ R + RK +R +G +K
Sbjct: 394 SCTVHK-NTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 435 APGCSWILVKGRVHVFSSGDRLEPHVEDI 463
G SW+ + +VH F++G+R ++I
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHEKSKEI 481
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 122/237 (51%), Gaps = 2/237 (0%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I+ Y + F + F+ P + S W+S+IS + QNEL ++ +MMA P
Sbjct: 56 LINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPD 115
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
+ + ++ D GR +H + +KT Y+ D+ + +SLV MYAKCGEI + ++F
Sbjct: 116 DHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFD 175
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
M R+ ++W+ M+ G + G EAL +++ L L + +F V++ CA++ L++
Sbjct: 176 EMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLEL 235
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
G ++ + + S+++L + G + A + +PV+ N IW A++
Sbjct: 236 GRQI-HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAML 290
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 101/294 (34%), Gaps = 67/294 (22%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M+ G+A G EEAL LF + + N +F S+ CA + LGRQ+H
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIH------- 240
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
GL +S +S+++ Y + G E A
Sbjct: 241 ---------------------GLSIKSSFDSSS-------FVGSSLVSLYSKCGVPEGAY 272
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
++F+ VP++N W M+ Y Q+ +
Sbjct: 273 QVFNEVPVKNLGIWNAML-------------------------------KAYAQHSHTQK 301
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
I LF M G P TF + A +D+GR ++ E SLV
Sbjct: 302 VIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVD 361
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHGRASEALTVYETMLEFG 293
M + G + ++ + +NM S W +++ + H A + + E G
Sbjct: 362 MLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELG 415
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 248/511 (48%), Gaps = 59/511 (11%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTL-SDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
M+ GF NG +A+ F +M + SD P+ T I+L AC LS LGR +H +I
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNF------DDQSLNSMINGYVQA 113
G+ D L SL+ Y+ S A + +N F D S +++I YVQ
Sbjct: 193 GF---SNDLSLVNSLLNCYA-------KSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN 242
Query: 114 GQLEKAQELFD------TVP----------------------------IRNKIAW----- 134
G +A +F+ T P IR +
Sbjct: 243 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 302
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
T ++ Y+ +A +F +P +D ++W ++ISG+ N + +I F M+ +
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 195 PLNGTFAV-LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 253
+ V + G+ + +L+Q + H +K ++ + + SLV +Y++CG + ++ +
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 254 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAG 312
+F+ +A +D + W S+I G HG+ ++AL + M++ + P+ VTFL +L+AC+HAG
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Query: 313 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
L+ +G +F MVN Y L P +HY +++LLGR G + A E R+P P I G L
Sbjct: 483 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTL 542
Query: 373 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 432
+G C + + + ++A K+L EL+ +A ++ + N+Y + LR ++ +G+
Sbjct: 543 LGACRIHQ-NGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGI 601
Query: 433 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
+K S I ++ +VH F + D L P E +
Sbjct: 602 KKGLAESLIEIRRKVHRFVADDELHPEKEPV 632
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 123/240 (51%), Gaps = 3/240 (1%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGF 193
+ +I Y+ G++ +A +FD + D + W+SM+SG+ +N +A+ F M MA
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 194 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 253
+P T L A ++ GR +HG ++ + DL L NSL++ YAK ++
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 219
Query: 254 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 313
+F +A +D ISW+++I +G A+EAL V+ M++ G P+ T L VL ACA A
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 314 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+++G + + GL+ +++++ + ++A R+P + W AL+
Sbjct: 280 LEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALI 337
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 150 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 209
A +F M R W +++ + + E + F M P N T V A G
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 210 VAYLDQGRQLHGMQVKTI-YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 268
+ ++ G +HG K + DL + +SL+ MY KCG + ++ R+F + D ++W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 269 MIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACA-----------HAGLVDK 316
M+ G +G +A+ + M + + PD VT + +++AC H ++ +
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 317 GW----ELFNSMVNSYGLQPGFDHYISIINLLG 345
G+ L NS++N Y F +++ ++
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 225
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 232/468 (49%), Gaps = 66/468 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI GF+ + E A LF+QM + + T+ L AC+G G+ LH +I
Sbjct: 276 MIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVI--- 332
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ L ++ S A+NAL I+ Y+Q
Sbjct: 333 ----------KKGLEQVTS-------ATNAL---------------ISMYIQ-------- 352
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
G + A LF+S+ +D I+W S+I+G+ Q L +
Sbjct: 353 ---------------------FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A+ F + + + F+ L + +A L G+Q+H + K+ + + + +SL+
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV 451
Query: 241 MYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
MY+KCG I+ + + F ++ + ++WN+MI+G + HG +L ++ M + D V
Sbjct: 452 MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHV 511
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
TF +LTAC+H GL+ +G EL N M Y +QP +HY + ++LLGRAG V A+E +
Sbjct: 512 TFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIES 571
Query: 360 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 419
+P+ P+ + +GVC + + ++A++ LLE++P + +V+L ++Y+ + E
Sbjct: 572 MPLNPDPMVLKTFLGVCR-ACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEE 630
Query: 420 LTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
S++K M+ +GV+K PG SWI ++ +V F++ DR P +DI + I
Sbjct: 631 KASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMI 678
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 204/473 (43%), Gaps = 59/473 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ G E+A LF M S S +G +F L A + LG Q+H +I G
Sbjct: 72 MISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGG 131
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ + Y G SLV MY+ ++ A A + ++ + S N++I G+VQ ++ A
Sbjct: 132 YECNVYVGS---SLVDMYAKCERVEDAFEAFK-EISEPNSVSWNALIAGFVQVRDIKTAF 187
Query: 121 ELFDTVPIRNKIAW----------------------------------------TCMISG 140
L + ++ + MIS
Sbjct: 188 WLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISS 247
Query: 141 YLSAGQVFKACDLFDSMP-DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y G V A +FD + +D I+W SMI+G+ ++EL A LF +M H T
Sbjct: 248 YADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYT 307
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK--CGEIDDSYRIFSN 257
+ L A + G+ LHGM +K E N+L+SMY + G ++D+ +F +
Sbjct: 308 YTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFES 367
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
+ +D ISWNS+I G + G + +A+ + + + D F +L +C+ + G
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG 427
Query: 318 WELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ +++ + GF + ++ S+I + + G ++ A + ++ + + W A++
Sbjct: 428 QQ-----IHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Query: 374 ---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSL 423
GL + D+ S+ + ++LD + + C+ +EL +L
Sbjct: 483 LGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL 535
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 17/283 (6%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
++ Y+ G + A LFD MP RDS++W +MISGY + +A LF M G
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD 100
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
+F+ L + SV D G Q+HG+ +K YE ++ + +SLV MYAKC ++D++ F
Sbjct: 101 GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFK 160
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVD 315
++ + +SWN++I G A + M ++ + D TF +LT L D
Sbjct: 161 EISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTL-----LDD 215
Query: 316 KGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGA 371
+ V++ L+ G H I+I N + G V DA+ L + W +
Sbjct: 216 PMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNS 275
Query: 372 LVGVCGLSKTDADVAS-----RATKRLLELDPLNAPGHVALCN 409
++ G SK + ++ + + +E D G ++ C+
Sbjct: 276 MIA--GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 193/342 (56%), Gaps = 6/342 (1%)
Query: 106 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 165
M+ YV ++E A++ F+ +P +N W+ M+SGY G V +A +F + RD + W
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIW 242
Query: 166 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 225
++I+GY QN +AI F M G+ P T + + A LD GR++H +
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH 302
Query: 226 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 285
E + + N+L+ MYAKCG+++++ +F +++ R NSMI L+ HG+ EAL +
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEM 362
Query: 286 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 345
+ TM L PD +TF+ VLTAC H G + +G ++F+ M + ++P H+ +I+LLG
Sbjct: 363 FSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLG 421
Query: 346 RAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN---AP 402
R+GK+K+A V + V+PN + GAL+G C + D ++A + K + + +
Sbjct: 422 RSGKLKEAYRLVKEMHVKPNDTVLGALLGACKV-HMDTEMAEQVMKIIETAGSITNSYSE 480
Query: 403 GHVA-LCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 443
H+A + N+YA +R +LR EM +G+ K+PG S +++
Sbjct: 481 NHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 137/254 (53%), Gaps = 14/254 (5%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP-DRDS 162
+S+I+ Y + G + A+++FD +P RN W MI GY+S G A LF+ + R++
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNT 144
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN-GTFAVLFGAMGSVAYLDQGRQLHG 221
+ W MI GY + I +A LF M F N ++V+ G + ++ R+
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERM---PFELKNVKAWSVMLGVYVNNRKMEDARKF-- 199
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
+ I E + + + ++S Y + G++ ++ IF + RD + WN++I G + +G + +
Sbjct: 200 --FEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDD 257
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS-- 339
A+ + M G PD VT +L+ACA +G +D G E+ +S++N G++ + ++S
Sbjct: 258 AIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV-HSLINHRGIE--LNQFVSNA 314
Query: 340 IINLLGRAGKVKDA 353
+I++ + G +++A
Sbjct: 315 LIDMYAKCGDLENA 328
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 40/230 (17%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A NG+ ++A+ F M +P+ T S+ ACA +GR++H+ + G
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG 304
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+L+ + SNAL I+ Y + G LE A
Sbjct: 305 IELN--------------------QFVSNAL---------------IDMYAKCGDLENAT 329
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD----RDSIAWTSMISGYVQNE 176
+F+++ +R+ MIS G+ +A ++F +M D I + ++++ V
Sbjct: 330 SVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGG 389
Query: 177 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG-RQLHGMQVK 225
+ E + +F EM P F L +G L + R + M VK
Sbjct: 390 FLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 7/208 (3%)
Query: 166 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 225
+++I ++ +A+ L+G + G +L V + G+ LH +K
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 226 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 285
D+++ +SL+SMY KCG + + ++F M R+ +WN+MI G +G A A +
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGL 134
Query: 286 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 345
+E E + +TVT++ ++ ++K ELF M + L+ + ++ +
Sbjct: 135 FE---EISVCRNTVTWIEMIKGYGKRIEIEKARELFERM--PFELK-NVKAWSVMLGVYV 188
Query: 346 RAGKVKDAEEFVLRLPVEPNHAIWGALV 373
K++DA +F +P E N +W ++
Sbjct: 189 NNRKMEDARKFFEDIP-EKNAFVWSLMM 215
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 231/455 (50%), Gaps = 29/455 (6%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHA---QLI 57
MI GF ++++ +M S +PN T IS+ AC GR++ + Q
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPS 380
Query: 58 VNGWKLDDYDGRLRRSLVRMYSVFGLMDYA-SNALEGNLNNF--DDQSLNSMINGYVQAG 114
V+ W +++ YS + + A SN + N D +L+ +++ +
Sbjct: 381 VSAWN----------AMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 115 QLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACD-------LFDSMPDRDSIA-WT 166
LE +++ V IR +I+ I L A V+ C+ +FD + IA W
Sbjct: 431 FLEGGKQIHGVV-IRTEISKNSHIVSGLIA--VYSECEKMEISECIFDDCINELDIACWN 487
Query: 167 SMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 225
SMISG+ N L +A+ LF M P +FA + + + L GRQ HG+ VK
Sbjct: 488 SMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVK 547
Query: 226 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 285
+ Y D +E +L MY KCGEID + + F + ++ + WN MI G +GR EA+ +
Sbjct: 548 SGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGL 607
Query: 286 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 345
Y M+ G PD +TF+ VLTAC+H+GLV+ G E+ +SM +G++P DHYI I++ LG
Sbjct: 608 YRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLG 667
Query: 346 RAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHV 405
RAG+++DAE+ P + + +W L+ C + D +A R ++L+ LDP ++ +V
Sbjct: 668 RAGRLEDAEKLAEATPYKSSSVLWEILLSSCRV-HGDVSLARRVAEKLMRLDPQSSAAYV 726
Query: 406 ALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
L N Y++ + + +L+ M V K PG SW
Sbjct: 727 LLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 148/279 (53%), Gaps = 10/279 (3%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N +++ Y++ G + A+++FD + +R+ +W ++ G + +AC++FD MP+RD +
Sbjct: 45 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
+W +MIS V+ +A+ ++ M+ GF P T A + A V G + HG+
Sbjct: 105 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 164
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDD-SYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 282
VKT + ++ + N+L+SMYAKCG I D R+F +++ +++S+ ++I GL+ + EA
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 283 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS----MVNSYGLQPGFDHYI 338
+ ++ M E G+ D+V +L+ A D E++ + ++ L+ GF +
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDL 284
Query: 339 SIIN-LLGRAGKVKD---AEEFVLRLPVEPNHAIWGALV 373
+ N LL K KD AE +P E N W ++
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMP-EVNVVSWNIMI 322
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 141/329 (42%), Gaps = 66/329 (20%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI GF E+AL+++ +M P+ T S+ AC+ + G + H + G
Sbjct: 109 MISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTG 168
Query: 61 WKLDDYDGRLRRSLVRMYSVFG-LMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
+ + G +L+ MY+ G ++DY
Sbjct: 169 LDKNIFVGN---ALLSMYAKCGFIVDYGV------------------------------- 194
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQN 175
+F+++ N++++T +I G +V +A +F M ++ DS+ ++++S
Sbjct: 195 -RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPR 253
Query: 176 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE 235
E ++G + G+Q+H + ++ + DL L
Sbjct: 254 EGCDSLSEIYGNEL--------------------------GKQIHCLALRLGFGGDLHLN 287
Query: 236 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 295
NSL+ +YAK +++ + IF+ M + +SWN MI+G R+ +++ M + G
Sbjct: 288 NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 347
Query: 296 PDTVTFLGVLTACAHAGLVDKGWELFNSM 324
P+ VT + VL AC +G V+ G +F+S+
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRIFSSI 376
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 42/214 (19%)
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK------------ 263
G+ +HG V+ + D L N L+ +Y +CG+ D + ++F M+ RD
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 264 -------------------ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 304
+SWN+MI L G +AL VY+ M+ G P T V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 305 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRL 360
L+AC+ ++D +F + ++ G D I +++++ + G + D V
Sbjct: 145 LSACSK--VLDG---VFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 394
+PN + A++G GL++ + + + RL+
Sbjct: 200 LSQPNEVSYTAVIG--GLARENKVLEAVQMFRLM 231
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 243/501 (48%), Gaps = 43/501 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQ----- 55
M+ GF +G ++A LF +M L++ P+ T ++L + + L +HA
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 56 -----LIVNGW-----KLDDYDG---------RLRRSLV------RMYSVFGLMDYA--- 87
+ N W K D D R R++V + YSVFG A
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 88 -----SNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYL 142
+ +L+ F + + + + G+L + + ++ A IS Y
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD-QDIEAINTFISMYS 302
Query: 143 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
+ A LFD M R ++WT MISGY + + EA++LF M+ G P T
Sbjct: 303 KSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLS 362
Query: 203 LFGAMGSVAYLDQGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
L G L+ G+ + + ++++ N+L+ MY+KCG I ++ IF N +
Sbjct: 363 LISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK 422
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
++W +MI G + +G EAL ++ M++ P+ +TFL VL ACAH+G ++KGWE F
Sbjct: 423 TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYF 482
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 381
+ M Y + PG DHY +++LLGR GK+++A E + + +P+ IWGAL+ C + +
Sbjct: 483 HIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHR- 541
Query: 382 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
+ +A +A + L L+P A +V + NIYAA +R M+ + ++K PG S I
Sbjct: 542 NVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601
Query: 442 LVKGRVHVFSSGDRLEPHVED 462
V G+ H F+ G+ HVE+
Sbjct: 602 QVNGKNHSFTVGEH--GHVEN 620
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 192/445 (43%), Gaps = 55/445 (12%)
Query: 13 EALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRR 72
E+LLLF +M +PN TF +A ACA L+ +HA LI + + D + G
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVG---T 91
Query: 73 SLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF--------- 123
+ V M+ +DYA+ E + D + N+M++G+ Q+G +KA LF
Sbjct: 92 ATVDMFVKCNSVDYAAKVFE-RMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 124 -DTVPIRNKIAWTCM-----------------------------ISGYLSAGQVFKACDL 153
D+V + I IS Y G + A +
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 154 FDSMP--DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 211
F+++ DR ++W SM Y +A L+ M+ F P TF L + +
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 271
L QGR +H + + D+ N+ +SMY+K + + +F M R +SW MI
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
G ++ G EAL ++ M++ G PD VT L +++ C G ++ G + ++ + YG +
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADIYGCK 389
Query: 332 PGFDHYI---SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASR 388
D+ + ++I++ + G + +A + P E W ++ L+ + A +
Sbjct: 390 R--DNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLE-ALK 445
Query: 389 ATKRLLELDPLNAPGHVALCNIYAA 413
++++LD P H+ + A
Sbjct: 446 LFSKMIDLD--YKPNHITFLAVLQA 468
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
AW I V E++ LF EM GF P N TF + A +A + +H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
+K+ + D+ + + V M+ KC +D + ++F M RD +WN+M+ G G +A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 284 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI--- 340
+++ M + PD+VT + ++ + + +K +L +M ++ G++ G D +++
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAM-HAVGIRLGVDVQVTVANT 193
Query: 341 -INLLGRAGKVKDAE 354
I+ G+ G + A+
Sbjct: 194 WISTYGKCGDLDSAK 208
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 244/487 (50%), Gaps = 53/487 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G++ + ++AL+ + +M P+ TF + AC+GL G +H ++ G
Sbjct: 78 MIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG 137
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++++ Y + L+ MY G ++Y E ++ ++ + S+I+G+V + A
Sbjct: 138 FEVNMY---VSTCLLHMYMCCGEVNYGLRVFE-DIPQWNVVAWGSLISGFVNNNRFSDAI 193
Query: 121 ELF-----------DTVPIR------------------------------------NKIA 133
E F +T+ + N I
Sbjct: 194 EAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVIL 253
Query: 134 WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF 193
T +I Y G + A LFD MP+R ++W S+I+GY QN EA+ +F +M+ G
Sbjct: 254 ATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGI 313
Query: 194 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 253
+P TF + A G+ +H KT + D + +LV+MYAK G+ + + +
Sbjct: 314 APDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKK 373
Query: 254 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAG 312
F ++ +D I+W +I+GL+ HG +EAL++++ M E G PD +T+LGVL AC+H G
Sbjct: 374 AFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIG 433
Query: 313 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
LV++G F M + +GL+P +HY ++++L RAG+ ++AE V +PV+PN IWGAL
Sbjct: 434 LVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGAL 493
Query: 373 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 432
+ C + + + ++ R + E + L + +V L NIYA R ++ +R+ M+ K V
Sbjct: 494 LNGCDIHE-NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRV 552
Query: 433 RKAPGCS 439
K G S
Sbjct: 553 DKVLGHS 559
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 17/270 (6%)
Query: 114 GQLEKAQELFDTVPIRNKIAW--TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISG 171
G + K+ + + +P+ I + TC + LS + +F+S+ W SMI G
Sbjct: 27 GLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYAR-----SVFESIDCPSVYIWNSMIRG 81
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 231
Y + +A+ + EM+ G+SP TF + A + + G +HG VKT +E +
Sbjct: 82 YSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVN 141
Query: 232 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 291
+ + L+ MY CGE++ R+F ++ + ++W S+I G ++ R S+A+ + M
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS 201
Query: 292 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--------SIINL 343
G+ + + +L AC + G + F+ + G P F + S+I++
Sbjct: 202 NGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 344 LGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ G ++ A +P E W +++
Sbjct: 261 YAKCGDLRTARYLFDGMP-ERTLVSWNSII 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGE-IDDSY--RIFSNMAYRDKISWNSMIMGLS 274
QLHG+ +K+ ++I + L+ C E ++ SY +F ++ WNSMI G S
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 275 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 334
+ +AL Y+ ML G PD TF VL AC +GL D F S V+ + ++ GF
Sbjct: 84 NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKAC--SGLRDIQ---FGSCVHGFVVKTGF 138
Query: 335 D--HYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ Y+S ++++ G+V +P + N WG+L+
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLI 180
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 248/509 (48%), Gaps = 52/509 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ +G +EAL L + DS T +SL AC G +H+ I +G
Sbjct: 222 MISGYCQSGNAKEALTLSNGLRAMDSV----TVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ + + + L+ +Y+ FG + + + D S NS+I Y Q +A
Sbjct: 278 LESELF---VSNKLIDLYAEFGRLRDCQKVFD-RMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 121 ELFDTVPIRNKIAWTCM-----------------------------------------IS 139
LF + + ++I C+ +
Sbjct: 334 SLFQEMRL-SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN-G 198
Y G V A +F+ +P+ D I+W ++ISGY QN +EAI ++ M G N G
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 199 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 258
T+ + A L QG +LHG +K D+ + SL MY KCG ++D+ +F +
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 259 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
+ + WN++I HG +A+ +++ ML+ G+ PD +TF+ +L+AC+H+GLVD+G
Sbjct: 513 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572
Query: 319 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 378
F M YG+ P HY ++++ GRAG+++ A +F+ + ++P+ +IWGAL+ C +
Sbjct: 573 WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRV 632
Query: 379 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
+ D+ A++ L E++P + HV L N+YA+ + + +R KG+RK PG
Sbjct: 633 -HGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGW 691
Query: 439 SWILVKGRVHVFSSGDRLEPHVEDILLQI 467
S + V +V VF +G++ P E++ ++
Sbjct: 692 SSMEVDNKVEVFYTGNQTHPMYEEMYREL 720
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 149/307 (48%), Gaps = 24/307 (7%)
Query: 68 GRLRRSLVRMYSVFGLMDYASNALEGNLNNFDD-QSLNSMINGYVQAGQLEKAQELFDTV 126
GR R L + SV ++NAL+ N ++ + ++ + + L+ A+ L +
Sbjct: 18 GRFTRVLQSIGSVIREFSASANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAKCLHARL 77
Query: 127 PIRNKIAWTC----MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI 182
+ +I C +++ Y G V A FD + +RD AW MISGY + +E I
Sbjct: 78 VVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVI 137
Query: 183 SLFGE-MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 241
F M++ G +P TF + A +V G ++H + +K + +D+ + SL+ +
Sbjct: 138 RCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHL 194
Query: 242 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP-DTVT 300
Y++ + ++ +F M RD SWN+MI G G A EALT L GL D+VT
Sbjct: 195 YSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVT 249
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEF 356
+ +L+AC AG ++G ++SY ++ G + + +I+L G+++D ++
Sbjct: 250 VVSLLSACTEAGDFNRG-----VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 357 VLRLPVE 363
R+ V
Sbjct: 305 FDRMYVR 311
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 139/321 (43%), Gaps = 58/321 (18%)
Query: 49 GRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMIN 108
+ LHA+L+V+ + + LV +Y G + A + + ++ N D + N MI+
Sbjct: 70 AKCLHARLVVSK---QIQNVCISAKLVNLYCYLGNVALARHTFD-HIQNRDVYAWNLMIS 125
Query: 109 GYVQAGQLEKAQELFD-----------------------TVPIRNKIAWTCMISG----- 140
GY +AG + F TV NKI + G
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDV 185
Query: 141 YLSAGQV-----FKACD----LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 191
Y++A + +KA LFD MP RD +W +MISGY Q+ EA++L ++
Sbjct: 186 YVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SN 240
Query: 192 GFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 250
G ++ T L A ++G +H +K E +L + N L+ +YA+ G + D
Sbjct: 241 GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD 300
Query: 251 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF--------- 301
++F M RD ISWNS+I + + A+++++ M + PD +T
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Query: 302 LGVLTAC--AHAGLVDKGWEL 320
LG + AC + KGW L
Sbjct: 361 LGDIRACRSVQGFTLRKGWFL 381
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 194/334 (58%), Gaps = 3/334 (0%)
Query: 132 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 191
I T ++ Y+ G++ A LF+SM +D +AW + ++ VQ A A+ F +M A
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 192 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 251
+ T + A G + L+ G +++ K + ++I+EN+ + M+ KCG + +
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 252 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
+F M R+ +SW++MI+G + +G + EALT++ TM GL P+ VTFLGVL+AC+HA
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 312 GLVDKGWELFNSMV--NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 369
GLV++G F+ MV N L+P +HY +++LLGR+G +++A EF+ ++PVEP+ IW
Sbjct: 325 GLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIW 384
Query: 370 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 429
GAL+G C + + D + + L+E P HV L NIYAA + + +R +MR
Sbjct: 385 GALLGACAVHR-DMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRK 443
Query: 430 KGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
G +K S + +G++H F+ GD+ P + I
Sbjct: 444 LGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAI 477
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
T ++ + G + A +FD M W ++ GYV+N+L E++ L+ +M G
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P T+ + A+ + G LH VK + I+ LV MY K GE+ + +
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL 166
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F +M +D ++WN+ + G ++ AL + M + D+ T + +L+AC G +
Sbjct: 167 FESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSL 226
Query: 315 DKGWELFN 322
+ G E+++
Sbjct: 227 EIGEEIYD 234
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 126/321 (39%), Gaps = 51/321 (15%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+ G+ N E+LLL+ +M +P+ T+ + A + L G LHA ++ G
Sbjct: 80 LFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG 139
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYAS-------------------------------- 88
+ G + LV MY FG + A
Sbjct: 140 FGCL---GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALE 196
Query: 89 --NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYL 142
N + + FD ++ SM++ Q G LE +E++D N I + +L
Sbjct: 197 YFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHL 256
Query: 143 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
G A LF+ M R+ ++W++MI GY N EA++LF M G P TF
Sbjct: 257 KCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLG 316
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE------NSLVSMYAKCGEIDDSYRIFS 256
+ A +++G++ + V++ D LE +V + + G ++++Y
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVQS---NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 257 NMAYR-DKISWNSMIMGLSDH 276
M D W +++ + H
Sbjct: 374 KMPVEPDTGIWGALLGACAVH 394
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 179/307 (58%), Gaps = 2/307 (0%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+ ++ Y+ G++ A LFD MP RDS+ +T+M GYVQ +++F EM GF+
Sbjct: 173 SALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA 232
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
+ L A G + L G+ +HG ++ L L N++ MY KC +D ++ +
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTV 292
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F NM+ RD ISW+S+I+G G + +++ ML+ G+ P+ VTFLGVL+ACAH GLV
Sbjct: 293 FVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV 352
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+K W L+ ++ Y + P HY S+ + + RAG +++AE+F+ +PV+P+ A+ GA++
Sbjct: 353 EKSW-LYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLS 411
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 434
C + + +V R + L++L P A +V L +Y+A R E SLR+ M+ K + K
Sbjct: 412 GCKV-YGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISK 470
Query: 435 APGCSWI 441
PGCS I
Sbjct: 471 VPGCSSI 477
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 152 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSV 210
+F MP R+ +W +I + ++ +++I LF M P + T ++ A +
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
G +H + +K + L + ++LV MY G++ + ++F +M RD + + +M
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
G G A L ++ M G D+V + +L AC G + G
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 254
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 223/443 (50%), Gaps = 38/443 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI ++ G E+L F M + T+ L +C+ LS G+ +H +LI G
Sbjct: 73 MIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTG 132
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ G++R +V +Y+ G++ AQ
Sbjct: 133 FH---RLGKIRIGVVELYT--------------------------------SGGRMGDAQ 157
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
++FD + RN + W MI G+ +G V + LF M +R ++W SMIS + E
Sbjct: 158 KVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDRE 217
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI-LENSLV 239
A+ LF EM+ GF P T + S+ LD G+ +H + D I + N+LV
Sbjct: 218 ALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALV 277
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDT 298
Y K G+++ + IF M R+ +SWN++I G + +G+ + +++ M+E G + P+
Sbjct: 278 DFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNE 337
Query: 299 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 358
TFLGVL C++ G V++G ELF M+ + L+ +HY ++++L+ R+G++ +A +F+
Sbjct: 338 ATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLK 397
Query: 359 RLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHI 418
+PV N A+WG+L+ C S D +A A L++++P N+ +V L N+YA R
Sbjct: 398 NMPVNANAAMWGSLLSAC-RSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQ 456
Query: 419 ELTSLRKEMRIKGVRKAPGCSWI 441
++ +R M+ +RK+ G S I
Sbjct: 457 DVEKVRTLMKKNRLRKSTGQSTI 479
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 40/256 (15%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
+F + + + + + +MI Y E++S F M + G T+A L + S++
Sbjct: 58 VFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSD 117
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
L G+ +HG ++T + + +V +Y G + D+ ++F M+ R+ + WN MI G
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRG 177
Query: 273 -------------------------------LSDHGRASEALTVYETMLEFGLYPDTVTF 301
LS GR EAL ++ M++ G PD T
Sbjct: 178 FCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATV 237
Query: 302 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFV 357
+ VL A G++D G + +S S GL F +I++ N L ++G + +A +
Sbjct: 238 VTVLPISASLGVLDTG-KWIHSTAESSGL---FKDFITVGNALVDFYCKSGDL-EAATAI 292
Query: 358 LRLPVEPNHAIWGALV 373
R N W L+
Sbjct: 293 FRKMQRRNVVSWNTLI 308
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 189/342 (55%), Gaps = 11/342 (3%)
Query: 114 GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV 173
Q+ K +E D ++ + ++ Y+ +G A +FD M +R+ + W S+IS
Sbjct: 260 AQIVKRKEKVD------QVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLS 313
Query: 174 QNELIAEAISLFGEMMAH--GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 231
+ + E +LF +M GFS T + A VA L G+++H +K+ + D
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFS--WATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 232 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 291
+ L NSL+ MY KCGE++ S R+F M +D SWN M+ + +G E + ++E M+E
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 292 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 351
G+ PD +TF+ +L+ C+ GL + G LF M + + P +HY ++++LGRAGK+K
Sbjct: 432 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 491
Query: 352 DAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIY 411
+A + + +P +P+ +IWG+L+ C L + V A K L L+P N +V + NIY
Sbjct: 492 EAVKVIETMPFKPSASIWGSLLNSCRL-HGNVSVGEIAAKELFVLEPHNPGNYVMVSNIY 550
Query: 412 AANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 453
A + +R+ M+ +GV+K GCSW+ VK ++ +F +G
Sbjct: 551 ADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 4/205 (1%)
Query: 150 ACDLFDSMPDRDSIA---WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 206
A +FD + D + W +M GY +N +A+ ++ +M+ P N + +V A
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 207 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 266
+ L GR +H VK + D ++ N L+ +Y + G DD+ ++F M+ R+ ++W
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
NS+I LS R E ++ M E + T +L AC+ + G E+ ++
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 327 SYGLQPGFDHYISIINLLGRAGKVK 351
S +P S++++ G+ G+V+
Sbjct: 366 SKE-KPDVPLLNSLMDMYGKCGEVE 389
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 243/480 (50%), Gaps = 47/480 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI F+ + +A+ LF +M + + + SL L+ LG+Q+H + +G
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLN---LGKQVHGYTLKSG 480
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
LD G SL +YS G ++ + +G + D+ SMI+G+ + G L +A
Sbjct: 481 LVLDLTVGS---SLFTLYSKCGSLEESYKLFQG-IPFKDNACWASMISGFNEYGYLREAI 536
Query: 121 ELFD------TVPIRNKIAW---------------------------------TCMISGY 141
LF T P + +A + +++ Y
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G + A ++D +P+ D ++ +S+ISGY Q+ LI + LF +M+ GF+ + +
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAIS 656
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
+ A G Q+H K + + +SL++MY+K G IDD + FS +
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP 716
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
D I+W ++I + HG+A+EAL VY M E G PD VTF+GVL+AC+H GLV++ +
Sbjct: 717 DLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHL 776
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 381
NSMV YG++P HY+ +++ LGR+G++++AE F+ + ++P+ +WG L+ C +
Sbjct: 777 NSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI-HG 835
Query: 382 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
+ ++ A K+ +EL+P +A +++L NI A E+ RK M+ GV+K PG S +
Sbjct: 836 EVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 181/402 (45%), Gaps = 51/402 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G N Y LF +M + KP+ T+ S+ ACA L G+ + A++I G
Sbjct: 222 IIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG 281
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D + ++V +Y+ G M A + N S M++GY ++ A
Sbjct: 282 AE----DVFVCTAIVDLYAKCGHMAEAMEVF-SRIPNPSVVSWTVMLSGYTKSNDAFSAL 336
Query: 121 ELFDT-----VPIRNKI---------------------AWT-------------CMISGY 141
E+F V I N AW +IS Y
Sbjct: 337 EIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMY 396
Query: 142 LSAGQVFKACDLFDSMPD--RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
+G + + +F+ + D R +I MI+ + Q++ +AI LF M+ G +
Sbjct: 397 SKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS 455
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
L + L+ G+Q+HG +K+ DL + +SL ++Y+KCG +++SY++F +
Sbjct: 456 VCSLLSVLDC---LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIP 512
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
++D W SMI G +++G EA+ ++ ML+ G PD T VLT C+ + +G E
Sbjct: 513 FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 361
+ + + G+ G D +++N+ + G +K A + RLP
Sbjct: 573 IHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 172/415 (41%), Gaps = 54/415 (13%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ + +EE+L F +M + N ++ S+ AC+ L P + I G
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMG 180
Query: 61 W---------KLDDYDGRLRRSLVRMYSVF----GLMDYASNAL-EGNLNN------FDD 100
+ +D + LR Y VF Y N + G L N FD
Sbjct: 181 YFFYEVVESALIDVFSKNLR--FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFD- 237
Query: 101 QSLNSMINGYVQ------------AGQLEK------AQELFDTVPIRNKIAWTCMISGYL 142
+ M G+ + LEK Q + T ++ Y
Sbjct: 238 -LFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYA 296
Query: 143 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
G + +A ++F +P+ ++WT M+SGY ++ A+ +F EM G N T
Sbjct: 297 KCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTS 356
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--AY 260
+ A G + + + Q+H K+ + D + +L+SMY+K G+ID S ++F ++
Sbjct: 357 VISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ 416
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA--CAHAGLVDKGW 318
R I N MI S + +A+ ++ ML+ GL D + +L+ C + G G+
Sbjct: 417 RQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGY 475
Query: 319 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
L + +V L G S+ L + G ++++ + +P + N A W +++
Sbjct: 476 TLKSGLV--LDLTVG----SSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMI 523
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 135/289 (46%), Gaps = 15/289 (5%)
Query: 98 FDDQSLNSMIN----GYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDL 153
F+DQS + + N +QA L + FD ++ ++W Y ++G + A L
Sbjct: 53 FNDQSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSW------YSNSGSMADAAKL 106
Query: 154 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
FD++P D ++ MISGY Q+ L E++ F +M GF ++ + A ++
Sbjct: 107 FDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAP 166
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 273
+ +K Y + ++E++L+ +++K +D+Y++F + + WN++I G
Sbjct: 167 LFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGA 226
Query: 274 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 333
+ ++ M PD+ T+ VL ACA + G ++ + V G +
Sbjct: 227 LRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFG-KVVQARVIKCGAEDV 285
Query: 334 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 382
F +I++L + G + +A E R+P P+ W ++ G +K++
Sbjct: 286 F-VCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVMLS--GYTKSN 330
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 231/476 (48%), Gaps = 49/476 (10%)
Query: 29 NGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYAS 88
N + I+ +C + L R LH +++ + + G + LV Y G D +
Sbjct: 33 NVSSLIAAVKSCVSIE---LCRLLHCKVVKS---VSYRHGFIGDQLVGCYLRLG-HDVCA 85
Query: 89 NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR------NKIAWTCMISG-- 140
L + D S NS+I+GY G L K E+ + I N++ + MIS
Sbjct: 86 EKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACV 145
Query: 141 ---------------------------------YLSAGQVFKACDLFDSMPDRDSIAWTS 167
Y G + +C LF+ + ++ ++W +
Sbjct: 146 YGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNT 205
Query: 168 MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI 227
MI ++QN L + ++ F G P TF + + + + + +HG+ +
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 228 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYE 287
+ + + +L+ +Y+K G ++DS +F + D ++W +M+ + HG +A+ +E
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 288 TMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA 347
M+ +G+ PD VTF +L AC+H+GLV++G F +M Y + P DHY +++LLGR+
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRS 385
Query: 348 GKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVAL 407
G ++DA + +P+EP+ +WGAL+G C + K D + ++A +RL EL+P + +V L
Sbjct: 386 GLLQDAYGLIKEMPMEPSSGVWGALLGACRVYK-DTQLGTKAAERLFELEPRDGRNYVML 444
Query: 408 CNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
NIY+A+ + + +R M+ KG+ +A GCS+I ++H F GD P E I
Sbjct: 445 SNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKI 500
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 8/281 (2%)
Query: 100 DQSLNSMINGYVQAGQLEKAQ----ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFD 155
D +++S+I +E + ++ +V R+ ++ YL G A LFD
Sbjct: 31 DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90
Query: 156 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH--GFSPLNGTFAVLFGAMGSVAYL 213
MP+RD ++W S+ISGY + + + MM GF P TF + A
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 273
++GR +HG+ +K ++ + N+ ++ Y K G++ S ++F +++ ++ +SWN+MI+
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 274 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 333
+G A + L + G PD TFL VL +C G+V + + ++ G
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA-QGIHGLIMFGGFSGN 269
Query: 334 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
++++L + G+++D+ V P+ W A++
Sbjct: 270 KCITTALLDLYSKLGRLEDSST-VFHEITSPDSMAWTAMLA 309
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 196 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 255
L+ + L A+ S ++ R LH VK++ + + LV Y + G + ++F
Sbjct: 30 LDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLF 89
Query: 256 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLTACAHAGL 313
M RD +SWNS+I G S G + V M+ E G P+ VTFL +++AC + G
Sbjct: 90 DEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGS 149
Query: 314 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
++G + +V +G+ + IN G+ G + + + L ++ N W ++
Sbjct: 150 KEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMI 207
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 235/457 (51%), Gaps = 40/457 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A NG+ EEAL + + M + K + +F ++ + L +G+++HA+++ NG
Sbjct: 231 LIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG 290
Query: 61 WKLDDYDGRLRRS-LVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
Y + S +V +Y G M YA +A ++ G+ G L A
Sbjct: 291 ----SYSNKFVSSGIVDVYCKCGNMKYAESA--------------HLLYGF---GNLYSA 329
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 179
+ MI GY S G++ +A LFDS+ +++ + WT+M GY+
Sbjct: 330 ---------------SSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPD 374
Query: 180 EAISLFGEMMAHGF-SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSL 238
+ L +A+ +P + + GA AY++ G+++HG ++T D L +
Sbjct: 375 SVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAF 434
Query: 239 VSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDT 298
V MY+KCG ++ + RIF + RD + +N+MI G + HG +++ +E M E G PD
Sbjct: 435 VDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDE 494
Query: 299 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 358
+TF+ +L+AC H GLV +G + F SM+ +Y + P HY +I+L G+A ++ A E +
Sbjct: 495 ITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELME 554
Query: 359 RL-PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRH 417
+ VE + I GA + C +K + ++ ++LL ++ N ++ + N YA++ R
Sbjct: 555 GIDQVEKDAVILGAFLNACSWNK-NTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRW 613
Query: 418 IELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 454
E+ +R +MR K + GCSW + + H+F+S D
Sbjct: 614 DEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSD 650
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 136/266 (51%), Gaps = 11/266 (4%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS-MPDR 160
S N ++N Y ++G L +A+ +FD + RN +W +I+ Y+ V +A +LF+S +R
Sbjct: 25 SSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCER 84
Query: 161 DSIAWTSMISGYVQNE-LIAEAISLFGEMMAHGFSPL---NGTFAVLFGAMGSVAYLDQG 216
D I + +++SG+ + + +EAI +FGEM + + T + + + G
Sbjct: 85 DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 217 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF--SNMAYRDKISWNSMIMGLS 274
QLHG+ VKT + +SL+ MY+KCG+ + IF S + + D ++ N+MI
Sbjct: 145 EQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYC 204
Query: 275 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 334
G +AL+V+ E DT+++ ++ A G ++ ++ SM + GL+
Sbjct: 205 REGDIDKALSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKMAVSMEEN-GLKWDE 260
Query: 335 DHYISIINLLGRAGKVKDAEEFVLRL 360
+ +++N+L +K +E R+
Sbjct: 261 HSFGAVLNVLSSLKSLKIGKEVHARV 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 173/386 (44%), Gaps = 16/386 (4%)
Query: 1 MIGGFA-WNGFYEEALLLFLQMTLSDSKP---NGETFISLAYACAGLSFPYLGRQLHAQL 56
++ GFA +G EA+ +F +M + + T ++ A L+ + G QLH L
Sbjct: 92 LLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVL 151
Query: 57 IVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNF-DDQSLNSMINGYVQAGQ 115
+ G +D SL+ MYS G N G+ F D + N+MI Y + G
Sbjct: 152 VKTG---NDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGD 208
Query: 116 LEKAQELFDTVP-IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ 174
++KA +F P + + I+W +I+GY G +A + SM + + + W G V
Sbjct: 209 IDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEE-NGLKWDEHSFGAVL 267
Query: 175 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV-AYLDQGRQLHGMQVKTIYEY-DL 232
N +++ SL H NG+++ F + G V Y G + +Y + +L
Sbjct: 268 N-VLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNL 326
Query: 233 ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF 292
+S++ Y+ G++ ++ R+F +++ ++ + W +M +G + + L + +
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIAN 386
Query: 293 GL-YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 351
PD++ + VL AC+ ++ G E+ + + G+ + +++ + G V+
Sbjct: 387 ETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLVTAFVDMYSKCGNVE 445
Query: 352 DAEEFVLRLPVEPNHAIWGALVGVCG 377
AE + E + ++ A++ C
Sbjct: 446 YAER-IFDSSFERDTVMYNAMIAGCA 470
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 190/349 (54%), Gaps = 9/349 (2%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDL 153
D SL +I VQ +EL +V +R ++ + I+ Y AG+ A +
Sbjct: 116 DRYSLPIVIKAAVQIHDFTLGKEL-HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKV 174
Query: 154 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
FD P+R +W ++I G EA+ +F +M G P + T + + G + L
Sbjct: 175 FDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDL 234
Query: 214 DQGRQLHG--MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 271
QLH +Q KT + D+++ NSL+ MY KCG +D + IF M R+ +SW+SMI+
Sbjct: 235 SLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIV 294
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
G + +G EAL + M EFG+ P+ +TF+GVL+AC H GLV++G F M + + L+
Sbjct: 295 GYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELE 354
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 391
PG HY I++LL R G++K+A++ V +P++PN +WG L+G C D ++A
Sbjct: 355 PGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCE-KFGDVEMAEWVAP 413
Query: 392 RLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
++EL+P N +V L N+YA ++ +RK M+ K V K P S+
Sbjct: 414 YMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 125/250 (50%), Gaps = 7/250 (2%)
Query: 129 RNKIAWTCMISGYLSAGQVFKA-CDLFDS-MPDRDSIA--WTSMISGYVQNELIAEAISL 184
RNK+ T ++S S +V + D+F S + D+ IA W +++ Y+++E +AI +
Sbjct: 46 RNKLLAT-LLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQV 104
Query: 185 FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK 244
+ M+ P + ++ A + G++LH + V+ + D E+ +++Y K
Sbjct: 105 YLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCK 164
Query: 245 CGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 304
GE +++ ++F R SWN++I GL+ GRA+EA+ ++ M GL PD T + V
Sbjct: 165 AGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSV 224
Query: 305 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI-SIINLLGRAGKVKDAEEFVLRLPVE 363
+C G + ++L ++ + + + S+I++ G+ G++ D + +
Sbjct: 225 TASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRM-DLASHIFEEMRQ 283
Query: 364 PNHAIWGALV 373
N W +++
Sbjct: 284 RNVVSWSSMI 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 37/192 (19%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+IGG G EA+ +F+ M S +P+ T +S+ +C GL L QLH + ++
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLH-KCVLQA 247
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D + SL+ MY G MD AS+
Sbjct: 248 KTEEKSDIMMLNSLIDMYGKCGRMDLASH------------------------------- 276
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD----RDSIAWTSMISGYVQNE 176
+F+ + RN ++W+ MI GY + G +A + F M + + I + ++S V
Sbjct: 277 -IFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGG 335
Query: 177 LIAEAISLFGEM 188
L+ E + F M
Sbjct: 336 LVEEGKTYFAMM 347
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 220/440 (50%), Gaps = 37/440 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ N EAL+LF +M ++++ + T ++ AC GL F G+Q+H
Sbjct: 290 MISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACK-- 346
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
FGL+D D +++++ Y + G +A
Sbjct: 347 --------------------FGLID-------------DIVVASTLLDMYSKCGSPMEAC 373
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+LF V + I MI Y S G++ A +F+ + ++ I+W SM +G+ QN E
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVE 433
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
+ F +M + + + A S++ L+ G Q+ + D ++ +SL+
Sbjct: 434 TLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLID 493
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
+Y KCG ++ R+F M D++ WNSMI G + +G+ EA+ +++ M G+ P +T
Sbjct: 494 LYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQIT 553
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
F+ VLTAC + GLV++G +LF SM +G P +H+ +++LL RAG V++A V +
Sbjct: 554 FMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM 613
Query: 361 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 420
P + + ++W +++ C + A + +A ++++EL+P N+ +V L I+A +
Sbjct: 614 PFDVDGSMWSSILRGCVANGYKA-MGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESS 672
Query: 421 TSLRKEMRIKGVRKAPGCSW 440
+RK MR V K PG SW
Sbjct: 673 ALVRKLMRENNVTKNPGSSW 692
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 178/374 (47%), Gaps = 12/374 (3%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ G+ NG+ EEAL LF ++ S + T ++ ACA L G+Q+HAQ+++ G
Sbjct: 161 LLHGYILNGYAEEALRLFKELNFS---ADAITLTTVLKACAELEALKCGKQIHAQILIGG 217
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D ++ SLV +Y+ G + AS LE + DD SL+++I+GY G++ +++
Sbjct: 218 VEC---DSKMNSSLVNVYAKCGDLRMASYMLE-QIREPDDHSLSALISGYANCGRVNESR 273
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
LFD R I W MISGY++ +A LF+ M R+ S V N I
Sbjct: 274 GLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM--RNETREDSRTLAAVINACIGL 331
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV-KTIYEYDLILENSLV 239
G+ M ++ + Y G + ++ + YD IL NS++
Sbjct: 332 GFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMI 391
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
+Y CG IDD+ R+F + + ISWNSM G S +G E L + M + L D V
Sbjct: 392 KVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEV 451
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 359
+ V++ACA ++ G ++F + GL S+I+L + G V+ V
Sbjct: 452 SLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRR-VFD 509
Query: 360 LPVEPNHAIWGALV 373
V+ + W +++
Sbjct: 510 TMVKSDEVPWNSMI 523
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 152/334 (45%), Gaps = 41/334 (12%)
Query: 18 FLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRM 77
FLQ D + ++ L +C+ + L RQ + L+ G+ + L++M
Sbjct: 17 FLQAMEVDCR---RYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVI--VANHLLQM 71
Query: 78 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 137
YS G M A N + + + + S N+MI GY+ +G+ + FD +P R+ +W +
Sbjct: 72 YSRSGKMGIARNLFD-EMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVV 130
Query: 138 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
+SG+ AG++ A LF++MP++D + S++ GY+ N EA+ LF E+ FS
Sbjct: 131 VSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADA 187
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE---------- 247
T + A + L G+Q+H + E D + +SLV++YAKCG+
Sbjct: 188 ITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ 247
Query: 248 ---------------------IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 286
+++S +F + R I WNSMI G + EAL ++
Sbjct: 248 IREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLF 307
Query: 287 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
M D+ T V+ AC G ++ G ++
Sbjct: 308 NEMRN-ETREDSRTLAAVINACIGLGFLETGKQM 340
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 52/294 (17%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
++ Y +G++ A +LFD MPDR+ +W +MI GY+ + GE
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNS----------GE--------- 108
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
GT S+ + D + G Y ++++ VS +AK GE+ + R+F+
Sbjct: 109 KGT---------SLRFFDMMPERDG------YSWNVV-----VSGFAKAGELSVARRLFN 148
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
M +D ++ NS++ G +G A EAL +++ E D +T VL ACA +
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFK---ELNFSADAITLTTVLKACAELEALKC 205
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV- 375
G ++ ++ G++ S++N+ + G ++ A + ++ +H++ + G
Sbjct: 206 GKQIHAQILIG-GVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYA 264
Query: 376 -CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMR 428
CG + R + R + L G Y AN+ +E L EMR
Sbjct: 265 NCGRVNESRGLFDRKSNRCVILWNSMISG-------YIANNMKMEALVLFNEMR 311
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 217 RQLHGMQVKTIYEYDL-ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 275
RQ +G+ +K + + I+ N L+ MY++ G++ + +F M R+ SWN+MI G +
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
G +L ++ M E Y V V++ A AG + LFN+M
Sbjct: 106 SGEKGTSLRFFDMMPERDGYSWNV----VVSGFAKAGELSVARRLFNAM 150
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 218/448 (48%), Gaps = 73/448 (16%)
Query: 18 FLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRM 77
+ +M S+ P+ TF S+ +CA LS +G+ +H +V+G
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSG----------------- 137
Query: 78 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 137
FGL Y AL + Y + G +E A+++FD
Sbjct: 138 ---FGLDTYVQAAL---------------VTFYSKCGDMEGARQVFD------------- 166
Query: 138 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
MP++ +AW S++SG+ QN L EAI +F +M GF P +
Sbjct: 167 ------------------RMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDS 208
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 257
TF L A + G +H + + ++ L +L+++Y++CG++ + +F
Sbjct: 209 ATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDK 268
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDK 316
M + +W +MI HG +A+ ++ M + G P+ VTF+ VL+ACAHAGLV++
Sbjct: 269 MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEE 328
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH---AIWGALV 373
G ++ M SY L PG +H++ ++++LGRAG + +A +F+ +L A+W A++
Sbjct: 329 GRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Query: 374 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 433
G C + + + D+ KRL+ L+P N HV L NIYA + + E++ +R M +R
Sbjct: 389 GACKMHR-NYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLR 447
Query: 434 KAPGCSWILVKGRVHVFSSGDRLEPHVE 461
K G S I V+ + ++FS GD E H E
Sbjct: 448 KQVGYSVIEVENKTYMFSMGD--ESHQE 473
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 129 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 188
R++ T +I+ SA + LF S+P D + S+I + L ++ + M
Sbjct: 39 RSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRM 98
Query: 189 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 248
++ SP N TF + + ++ L G+ +H V + + D ++ +LV+ Y+KCG++
Sbjct: 99 LSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDM 158
Query: 249 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 308
+ + ++F M + ++WNS++ G +G A EA+ V+ M E G PD+ TF+ +L+AC
Sbjct: 159 EGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSAC 218
Query: 309 AHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEP 364
A G V G S V+ Y + G D + ++INL R G V A E ++ E
Sbjct: 219 AQTGAVSLG-----SWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ET 272
Query: 365 NHAIWGALVGVCG 377
N A W A++ G
Sbjct: 273 NVAAWTAMISAYG 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 111/284 (39%), Gaps = 76/284 (26%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ GF NG +EA+ +F QM S +P+ TF+SL ACA LG +H +I G
Sbjct: 179 LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
L+ G ++IN Y + G + KA+
Sbjct: 239 LDLNVKLG-----------------------------------TALINLYSRCGDVGKAR 263
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
E+FD + N AWT MIS Y + G +A +LF+ M D
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDC------------------- 304
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI--LEN-- 236
G P N TF + A +++GR ++ K+ Y LI +E+
Sbjct: 305 -----------GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS---YRLIPGVEHHV 350
Query: 237 SLVSMYAKCGEIDDSYRIFSNMAYRDKIS----WNSMIMGLSDH 276
+V M + G +D++Y+ + K + W +M+ H
Sbjct: 351 CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 219/452 (48%), Gaps = 42/452 (9%)
Query: 28 PNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYA 87
P+ TF + AC S G+Q+H + G+ D Y ++ SLV Y V G A
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIY---VQNSLVHFYGVCGESRNA 160
Query: 88 SNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIA-WTC---------- 136
G + D S +I G+ + G ++A + F + + +A + C
Sbjct: 161 CKVF-GEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGC 219
Query: 137 -------------------------MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISG 171
+I Y+ Q+ A +F + +D ++W SMISG
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 172 YVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY 230
V E EAI LF M + G P + A S+ +D GR +H + ++
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 231 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 290
D + ++V MYAKCG I+ + IF+ + ++ +WN+++ GL+ HG E+L +E M+
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 291 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN-SYGLQPGFDHYISIINLLGRAGK 349
+ G P+ VTFL L AC H GLVD+G F+ M + Y L P +HY +I+LL RAG
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 350 VKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 409
+ +A E V +PV+P+ I GA++ C T ++ L+++ ++ +V L N
Sbjct: 460 LDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSN 519
Query: 410 IYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
I+AAN R ++ +R+ M++KG+ K PG S+I
Sbjct: 520 IFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
S ++ +++S Y + I + +++GFSP TF +F A G + + +G+Q+HG
Sbjct: 71 SFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 130
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
+ K + D+ ++NSLV Y CGE ++ ++F M RD +SW +I G + G E
Sbjct: 131 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
AL + M + P+ T++ VL + G + G
Sbjct: 191 ALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLG 223
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 124/309 (40%), Gaps = 55/309 (17%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I GF G Y+EAL F +M D +PN T++ + + + LG+ +H ++
Sbjct: 178 IITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA 234
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ G +L+ MY + A G L D S NSMI+G V + ++A
Sbjct: 235 SLISLETGN---ALIDMYVKCEQLSDAMRVF-GELEKKDKVSWNSMISGLVHCERSKEAI 290
Query: 121 ELFDTVPIRNKIA-----------------------W-----------------TCMISG 140
+LF + + I W T ++
Sbjct: 291 DLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDM 350
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y G + A ++F+ + ++ W +++ G + E++ F EM+ GF P TF
Sbjct: 351 YAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTF 410
Query: 201 AVLFGAMGSVAYLDQGRQ-LHGMQVKTIYEYDLI--LEN--SLVSMYAKCGEIDDSYRIF 255
A +D+GR+ H M+ + EY+L LE+ ++ + + G +D++ +
Sbjct: 411 LAALNACCHTGLVDEGRRYFHKMKSR---EYNLFPKLEHYGCMIDLLCRAGLLDEALELV 467
Query: 256 SNMAYRDKI 264
M + +
Sbjct: 468 KAMPVKPDV 476
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 218/448 (48%), Gaps = 43/448 (9%)
Query: 2 IGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAY-ACAGLSFPYLGRQLHAQLIVNG 60
+ +A G +E+AL LFLQM S + P SLA +CA P LG +HA + +
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKS- 77
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ SN G ++++ Y + + A+
Sbjct: 78 ------------------------NFLSNPFVGC----------ALLDMYGKCLSVSHAR 103
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLF---DSMPDRDSIAWTSMISGYVQNEL 177
+LFD +P RN + W MIS Y G+V +A +L+ D MP+ S + ++I G V E
Sbjct: 104 KLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS--FNAIIKGLVGTED 161
Query: 178 IA-EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN 236
+ AI + +M+ F P T L A ++ +++H + + E L++
Sbjct: 162 GSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKS 221
Query: 237 SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 296
LV Y +CG I +F +M RD ++W+S+I + HG A AL ++ M + P
Sbjct: 222 GLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTP 281
Query: 297 DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 356
D + FL VL AC+HAGL D+ F M YGL+ DHY ++++L R G+ ++A +
Sbjct: 282 DDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKV 341
Query: 357 VLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 416
+ +P +P WGAL+G C + + ++A A + LL ++P N +V L IY + R
Sbjct: 342 IQAMPEKPTAKTWGALLGACR-NYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGR 400
Query: 417 HIELTSLRKEMRIKGVRKAPGCSWILVK 444
E LR +M+ GV+ +PG SW L K
Sbjct: 401 QEEAERLRLKMKESGVKVSPGSSWCLFK 428
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHG 221
I+ T +S Y +A++LF +M + PL+ F++ + + G +H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
VK+ + + + +L+ MY KC + + ++F + R+ + WN+MI + G+ E
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD------KGWELFNSMVNSYGLQPGFD 335
A+ +YE M + P+ +F ++ GLV + E + M+ + +P
Sbjct: 133 AVELYEAM---DVMPNESSFNAIIK-----GLVGTEDGSYRAIEFYRKMIE-FRFKPNLI 183
Query: 336 HYISIINLLGRAGK---VKDAEEFVLRLPVEPNHAIWGALV---GVCG 377
+++++ G +K+ + R +EP+ + LV G CG
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCG 231
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 234/492 (47%), Gaps = 65/492 (13%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDS-KPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
MI GF+ + + + LFL M D PN T + + FP LGR A +
Sbjct: 175 MISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM--------FPALGR---AGALRE 223
Query: 60 GWKLDDYDGRL--------RRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYV 111
G + Y R+ + ++ +Y+ + YA + + ++ + ++MI GYV
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKK-NEVTWSAMIGGYV 282
Query: 112 QAGQLEKAQELFDTVPIRNKIAWT-----------CMISGYLSAGQVFKA---------- 150
+ +++A E+F + + + +A C G LS G+
Sbjct: 283 ENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILD 342
Query: 151 -----------------CDLFDSMPD---RDSIAWTSMISGYVQNELIAEAISLFGEMMA 190
CD F + +D I++ S+I+G V N E+ LF EM
Sbjct: 343 LTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRT 402
Query: 191 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 250
G P T + A +A L G HG V Y + + N+L+ MY KCG++D
Sbjct: 403 SGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDV 462
Query: 251 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 310
+ R+F M RD +SWN+M+ G HG EAL+++ +M E G+ PD VT L +L+AC+H
Sbjct: 463 AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSH 522
Query: 311 AGLVDKGWELFNSMVN-SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 369
+GLVD+G +LFNSM + + P DHY + +LL RAG + +A +FV ++P EP+ +
Sbjct: 523 SGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVL 582
Query: 370 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 429
G L+ C K +A++ + +K++ L V L N Y+A +R + +R +
Sbjct: 583 GTLLSACWTYK-NAELGNEVSKKMQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKK 640
Query: 430 KGVRKAPGCSWI 441
+G+ K PG SW+
Sbjct: 641 RGLLKTPGYSWV 652
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 118/241 (48%), Gaps = 13/241 (5%)
Query: 141 YLSAGQVFKACDLFDSMPDR--DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG 198
Y S +V A +FD +P + IAW MI Y N+ +A+ L+ +M+ G P
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 199 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 258
T+ + A + +D G+ +H + + D+ + +LV YAKCGE++ + ++F M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 259 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKG 317
RD ++WN+MI G S H ++ + ++ M GL P+ T +G+ A AG + +G
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 318 WELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
V+ Y + GF + + I+++ ++ + A V L + N W A++
Sbjct: 225 -----KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARR-VFDLDFKKNEVTWSAMI 278
Query: 374 G 374
G
Sbjct: 279 G 279
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 162/388 (41%), Gaps = 90/388 (23%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI +A N F E+AL L+ +M S +P T+ + ACAGL G+ +H+ + +
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D MY L+D+ Y + G+LE A
Sbjct: 134 FATD------------MYVCTALVDF-----------------------YAKCGELEMAI 158
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
++F D MP RD +AW +MISG+ + + +
Sbjct: 159 KVF-------------------------------DEMPKRDMVAWNAMISGFSLHCCLTD 187
Query: 181 AISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 239
I LF +M G SP T +F A+G L +G+ +HG + + DL+++ ++
Sbjct: 188 VIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGIL 247
Query: 240 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
+YAK I + R+F +++++W++MI G ++ EA V+ M L D V
Sbjct: 248 DVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNV 303
Query: 300 TFLG------VLTACAHAGLVDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGK 349
+ +L CA G + G V+ Y ++ GF D + +II+ + G
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGG-----RCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 350 VKDA----EEFVLRLPVEPNHAIWGALV 373
+ DA E L+ + N I G +V
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVV 386
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 237 SLVSMYAKCGEIDDSYRIFSNMAYR--DKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
+L +YA C E++ + +F + + + I+W+ MI + + A +AL +Y ML G+
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV 99
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 354
P T+ VL ACA +D G +L +S VN ++++ + G+++ A
Sbjct: 100 RPTKYTYPFVLKACAGLRAIDDG-KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAI 158
Query: 355 EFVLRLPVEPNHAIWGALV 373
+ +P + + W A++
Sbjct: 159 KVFDEMP-KRDMVAWNAMI 176
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 181/329 (55%), Gaps = 1/329 (0%)
Query: 130 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 189
+ I T ++ Y + G V A +FD MP RD ++W MI + L +A+S++ M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 190 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 249
G + T L + V+ L+ G LH + E + + N+L+ MYAKCG ++
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 250 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 309
++ +F+ M RD ++WNSMI+G HG EA++ + M+ G+ P+ +TFLG+L C+
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 310 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 369
H GLV +G E F M + + L P HY +++L GRAG+++++ E + + +W
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 370 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 429
L+G C + + + ++ A K+L++L+ NA +V + +IY+A + S+RK +R
Sbjct: 381 RTLLGSCKIHR-NLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRS 439
Query: 430 KGVRKAPGCSWILVKGRVHVFSSGDRLEP 458
++ PG SWI + +VH F D++ P
Sbjct: 440 HDLQTVPGWSWIEIGDQVHKFVVDDKMHP 468
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 18/225 (8%)
Query: 101 QSLNSM-----INGYVQAGQLEKAQELFDTVPIRNKIAWTCMIS--GYLSAGQVFKACDL 153
Q NSM I+ +V L+ +F N + C +S G LS Q+ D
Sbjct: 13 QGCNSMKKLRKIHSHVIINGLQHHPSIF------NHLLRFCAVSVTGSLSHAQLLF--DH 64
Query: 154 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAY 212
FDS P W +I G+ + +I + M+ S P TF + +
Sbjct: 65 FDSDPSTSD--WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS 122
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
+ + ++HG +++ + D I+ SLV Y+ G ++ + ++F M RD +SWN MI
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICC 182
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
S G ++AL++Y+ M G+ D+ T + +L++CAH ++ G
Sbjct: 183 FSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG 227
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 243/491 (49%), Gaps = 47/491 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+A G E L L +M +P+ +TF + + +GR LH Q++ G
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTG 275
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D D L+ +L+ MY G + + LE + N D MI+G ++ G+ EKA
Sbjct: 276 F---DVDMHLKTALITMYLKCGKEEASYRVLE-TIPNKDVVCWTVMISGLMRLGRAEKAL 331
Query: 121 ELFDTV----------PIRNKIAWTC------------------------------MISG 140
+F + I + +A +C +I+
Sbjct: 332 IVFSEMLQSGSDLSSEAIASVVA-SCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITM 390
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-T 199
Y G + K+ +F+ M +RD ++W ++ISGY QN + +A+ LF EM ++ T
Sbjct: 391 YAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFT 450
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
L A S L G+ +H + +++ +++ +LV MY+KCG ++ + R F +++
Sbjct: 451 VVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS 510
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
++D +SW +I G HG+ AL +Y L G+ P+ V FL VL++C+H G+V +G +
Sbjct: 511 WKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLK 570
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
+F+SMV +G++P +H +++LL RA +++DA +F P+ + G ++ C +
Sbjct: 571 IFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACR-A 629
Query: 380 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 439
+V + ++EL P +A +V L + +AA R +++ +MR G++K PG S
Sbjct: 630 NGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWS 689
Query: 440 WILVKGRVHVF 450
I + G+ F
Sbjct: 690 KIEMNGKTTTF 700
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 184/412 (44%), Gaps = 50/412 (12%)
Query: 2 IGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGW 61
I + +G +++ L F M + P+ TF SL ACA L G +H Q++VNG+
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 62 KLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQE 121
D Y + SLV +Y+ FGL+ +A E + D +MI Y +AG + +A
Sbjct: 78 SSDFY---ISSSLVNLYAKFGLLAHARKVFE-EMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 122 LFDTVPIR----NKIAWTCMISGYLSAGQ------------------------------- 146
L + + + + M+SG L Q
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCD 193
Query: 147 -VFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 205
V A DLFD M RD ++W +MISGY ++E + L M G P TF
Sbjct: 194 HVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Query: 206 AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS 265
G++ L+ GR LH VKT ++ D+ L+ +L++MY KCG+ + SYR+ + +D +
Sbjct: 254 VSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVC 313
Query: 266 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
W MI GL GRA +AL V+ ML+ G + V+ +CA G D G + V
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG-----ASV 368
Query: 326 NSYGLQPGFD----HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ Y L+ G+ S+I + + G + D + E + W A++
Sbjct: 369 HGYVLRHGYTLDTPALNSLITMYAKCGHL-DKSLVIFERMNERDLVSWNAII 419
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 242/502 (48%), Gaps = 48/502 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G N E+ L+ F M +S P T+ + C+ L LG+ +HA++IV+
Sbjct: 271 MIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
L D L +L+ MY G M A G ++N + S NS+I+G + G E+A
Sbjct: 331 -SLADLP--LDNALLDMYCSCGDMREAFYVF-GRIHNPNLVSWNSIISGCSENGFGEQAM 386
Query: 121 ELFD-----TVPIRNKIAWTCMIS----------GYLSAGQVFK---------------- 149
++ + P ++ ++ IS G L GQV K
Sbjct: 387 LMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSM 446
Query: 150 ---------ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
A +FD M +RD + WT MI G+ + A+ F EM +
Sbjct: 447 YFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSL 506
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ + GA +A L QG H + ++T ++ + + +LV MY K G+ + + IFS +
Sbjct: 507 SSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN 566
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
D WNSM+ S HG +AL+ +E +LE G PD VT+L +L AC+H G +G L
Sbjct: 567 PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFL 626
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA-IWGALVGVCGLS 379
+N M G++ GF HY ++NL+ +AG V +A E + + P N A +W L+ C ++
Sbjct: 627 WNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSAC-VN 684
Query: 380 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 439
+ + A +++L+LDP + H+ L N+YA N R ++ +R+++R K PG S
Sbjct: 685 TRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLS 744
Query: 440 WILV-KGRVHVFSSGDRLEPHV 460
WI V VFSSGD+ P V
Sbjct: 745 WIEVNNNNTQVFSSGDQSNPEV 766
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 97/182 (53%), Gaps = 1/182 (0%)
Query: 130 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 189
N + T ++ Y S G + A +FD + +RD++AW +MI G ++N+ I + + F M+
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 190 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 249
G P T++++ + G+ +H + + DL L+N+L+ MY CG++
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMR 352
Query: 250 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL-YPDTVTFLGVLTAC 308
+++ +F + + +SWNS+I G S++G +A+ +Y +L PD TF ++A
Sbjct: 353 EAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISAT 412
Query: 309 AH 310
A
Sbjct: 413 AE 414
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 119/243 (48%), Gaps = 5/243 (2%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN-ELIAEAISLFGEMMAHGFSP 195
+IS Y+ G + +A +FD MP R+ +++ ++ S Y +N + + A L M P
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKP 197
Query: 196 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 255
+ TF L + + G L+ +K Y +++++ S++ MY+ CG+++ + RIF
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 256 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 315
+ RD ++WN+MI+G + + + L + ML G+ P T+ VL C+ G
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 316 KGWELFNSMVNSYGLQP-GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
G + ++ S L D+ +++++ G +++A R+ PN W +++
Sbjct: 318 LGKLIHARIIVSDSLADLPLDN--ALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIIS 374
Query: 375 VCG 377
C
Sbjct: 375 GCS 377
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 28/235 (11%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG---- 192
+IS Y+ + +A +FD MP R+ + + + + E ++ SL +++ G
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVF---EYVSMGSSLHSQIIKLGSFQM 84
Query: 193 --FSPLN---GTFAVLFGAMGSVAYLDQGRQLH------GMQVKTIYEYDLILENSLVSM 241
F PLN + L S+ L + RQ+H G T Y N+L+SM
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPY---ANNNLISM 141
Query: 242 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR-ASEALTVYETMLEFGLYPDTVT 300
Y +CG ++ + ++F M +R+ +S+N++ S + AS A + M + P++ T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF-DHYISIINLLGRAGKVKDAE 354
F ++ CA V L S +NS ++ G+ D+ + ++LG D E
Sbjct: 202 FTSLVQVCAVLEDV-----LMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 175/329 (53%), Gaps = 1/329 (0%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+ +I Y G F S +D +WTSMI +VQNE + A LF ++ +
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P T +++ A A L G Q+ G +K+ + ++ S +SMYAK G + + ++
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F + D ++++MI L+ HG A+EAL ++E+M G+ P+ FLGVL AC H GLV
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+G + F M N Y + P H+ +++LLGR G++ DAE +L + + W AL+
Sbjct: 577 TQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 434
C + K D+ + R +RL+EL+P + +V L NIY + + +R+ MR +GV+K
Sbjct: 637 SCRVYK-DSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKK 695
Query: 435 APGCSWILVKGRVHVFSSGDRLEPHVEDI 463
P SWI++ + H F+ D P + I
Sbjct: 696 EPALSWIVIGNQTHSFAVADLSHPSSQMI 724
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 187/424 (44%), Gaps = 61/424 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+ GFYE+A+ LFL+ ++ K + T+ C LG LH ++VNG
Sbjct: 119 LISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNG 178
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ L L+ MYS G +D A + + + D S NS+I+GYV+ G E+
Sbjct: 179 LSQQVF---LINVLIDMYSKCGKLDQAMSLFD-RCDERDQVSWNSLISGYVRVGAAEEPL 234
Query: 121 ELFDTVP--------------------------IRNKIAWTC----------------MI 138
L + I +A C ++
Sbjct: 235 NLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALL 294
Query: 139 SGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ-----NELIAEAISLFGEMMAHGF 193
Y G + +A LF MP ++ + + +MISG++Q +E +EA LF +M G
Sbjct: 295 DMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGL 354
Query: 194 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 253
P TF+V+ A + L+ GRQ+H + K ++ D + ++L+ +YA G +D +
Sbjct: 355 EPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQ 414
Query: 254 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 313
F++ + +D SW SMI + + A ++ + + P+ T +++ACA
Sbjct: 415 CFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAA 474
Query: 314 VDKGWELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIW 369
+ G + + Y ++ G D + S+ I++ ++G + A + + + P+ A +
Sbjct: 475 LSSGEQ-----IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ-NPDVATY 528
Query: 370 GALV 373
A++
Sbjct: 529 SAMI 532
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 14/252 (5%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
LFD MP+R+ I++ S+ISGY Q +A+ LF E T+A G G
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCD 163
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
LD G LHG+ V + L N L+ MY+KCG++D + +F RD++SWNS+I G
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA---HAGLVDKGWELFNSMVNSYG 329
G A E L + M GL T VL AC + G ++KG ++ Y
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA-----IHCYT 278
Query: 330 LQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGLSKTDAD 384
+ G + I +++++ + G +K+A + +P N + A++ G + + +
Sbjct: 279 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMDEITDE 337
Query: 385 VASRATKRLLEL 396
+S A K +++
Sbjct: 338 ASSEAFKLFMDM 349
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 47/300 (15%)
Query: 13 EALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRR 72
EA LF+ M +P+ TF + AC+ GRQ+HA + N ++ D++ G
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG---S 397
Query: 73 SLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTV------ 126
+L+ +Y++ G + + + D S SMI+ +VQ QLE A +LF +
Sbjct: 398 ALIELYALMGSTEDGMQCF-ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 127 ----------------------------PIRNKI-----AWTCMISGYLSAGQVFKACDL 153
I++ I T IS Y +G + A +
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 154 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
F + + D +++MIS Q+ EA+++F M HG P F + A +
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 214 DQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRIFSNMAYRDK-ISWNSMI 270
QG + + +K Y + ++ LV + + G + D+ + + ++D ++W +++
Sbjct: 577 TQGLK-YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALL 635
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ +LF + G+ HG +K+ L L N+L++MY KC E+ + ++F M
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
R+ IS+NS+I G + G +A+ ++ E L D T+ G L C +D G E
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-E 168
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
L + +V GL +I++ + GK+ A R E + W +L+
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLI 221
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 183/343 (53%), Gaps = 13/343 (3%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I Y S G + A +FD MP+R ++W SMI V+ A+ LF EM F P
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPD 250
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI---YEYDLILENSLVSMYAKCGEIDDSYR 253
T + A + L G H ++ D++++NSL+ MY KCG + + +
Sbjct: 251 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 310
Query: 254 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF--GLYPDTVTFLGVLTACAHA 311
+F M RD SWN+MI+G + HGRA EA+ ++ M++ + P++VTF+G+L AC H
Sbjct: 311 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 370
Query: 312 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 371
G V+KG + F+ MV Y ++P +HY I++L+ RAG + +A + V+ +P++P+ IW +
Sbjct: 371 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 430
Query: 372 LVGVCGLSKTDADVASRATKRLL------ELDPLNAPG-HVALCNIYAANDRHIELTSLR 424
L+ C +++ + ++ E N G +V L +YA+ R ++ +R
Sbjct: 431 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 490
Query: 425 KEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
K M G+RK PGCS I + G H F +GD P + I Q+
Sbjct: 491 KLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQL 533
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 6/225 (2%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQN-ELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSV 210
+FDS+ + S W ++I + EA L+ +M+ G SP TF + A +
Sbjct: 105 VFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYI 164
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
+G+Q+H VK + D+ + N L+ +Y CG +D + ++F M R +SWNSMI
Sbjct: 165 FGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMI 224
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
L G AL ++ M + PD T VL+ACA G + G ++ +
Sbjct: 225 DALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDV 283
Query: 331 QPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
D + S+I + + G ++ AE+ V + + + A W A++
Sbjct: 284 DVAMDVLVKNSLIEMYCKCGSLRMAEQ-VFQGMQKRDLASWNAMI 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 52/317 (16%)
Query: 12 EEALLLFLQM-TLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRL 70
EEA +L+ +M +S P+ TF + ACA + G+Q+H Q++ +G+ D Y +
Sbjct: 132 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVY---V 188
Query: 71 RRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVP--- 127
L+ +Y G +D A + + S NSMI+ V+ G+ + A +LF +
Sbjct: 189 NNGLIHLYGSCGCLDLARKVFD-EMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSF 247
Query: 128 -----IRNKIAWTCMISGYLSAGQ-----VFKACD------------------------- 152
+ C G LS G + + CD
Sbjct: 248 EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRM 307
Query: 153 ---LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM--AHGFSPLNGTFAVLFGAM 207
+F M RD +W +MI G+ + EA++ F M+ P + TF L A
Sbjct: 308 AEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIAC 367
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRIFSNMAYR-DKI 264
++++GRQ M V+ Y + LE+ +V + A+ G I ++ + +M + D +
Sbjct: 368 NHRGFVNKGRQYFDMMVRD-YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAV 426
Query: 265 SWNSMIMGLSDHGRASE 281
W S++ G + E
Sbjct: 427 IWRSLLDACCKKGASVE 443
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYD---LILENSLVSMYAKCGEIDDSYRIFSNMA 259
+F + + + Q +QLH ++T Y + L L ++ + + +++ ++R+F ++
Sbjct: 51 IFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 260 YRDKISWNSMIMGLS-DHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKG 317
WN++I + D R EA +Y MLE G PD TF VL ACA+ +G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 318 WELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
++ +V +G G D Y++ +I+L G G + A + +P E + W +++
Sbjct: 171 KQVHCQIVK-HGF--GGDVYVNNGLIHLYGSCGCLDLARKVFDEMP-ERSLVSWNSMI 224
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 183/346 (52%), Gaps = 6/346 (1%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
+LN++I Y ++ A +LFD P R+ + + +I G + A ++ +A +LFDSMP RD
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRD 213
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
++W S+ISGY Q EAI LF EM+A G P N A +G+ +H
Sbjct: 214 LVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHD 273
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 281
+ D L LV YAKCG ID + IF + + +WN+MI GL+ HG
Sbjct: 274 YTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGEL 333
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 341
+ + M+ G+ PD VTF+ VL C+H+GLVD+ LF+ M + Y + HY +
Sbjct: 334 TVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMA 393
Query: 342 NLLGRAGKVKDAEEFVLRLPVEPNHA----IWGALVGVCGLSKTDADVASRATKRLLELD 397
+LLGRAG +++A E + ++P + + W L+G C + + ++A +A R+ L
Sbjct: 394 DLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRI-HGNIEIAEKAANRVKALS 452
Query: 398 PLNAPGHVALCNIYAANDRHIELTSLRKEM-RIKGVRKAPGCSWIL 442
P + + + +YA +R E+ +R+ + R K V+K G S +L
Sbjct: 453 PEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKVL 498
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 226/445 (50%), Gaps = 46/445 (10%)
Query: 39 ACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNAL--EGNLN 96
AC+ +G+QLH ++ +G + + +L+ MYS G + YA++ E
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFA---ISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 97 NFDDQSLNSMINGYVQAGQLEKAQEL----------FDTVPIRN---------------K 131
N NSM++G++ + E A L FD+ + +
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 132 IAWTCMISGY--------------LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNEL 177
+ ++SGY + G + A LF +P++D IA++ +I G V++
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 178 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS 237
+ A LF E++ G + + S+A L G+Q+HG+ +K YE + + +
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATA 483
Query: 238 LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 297
LV MY KCGEID+ +F M RD +SW +I+G +GR EA + M+ G+ P+
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPN 543
Query: 298 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 357
VTFLG+L+AC H+GL+++ +M + YGL+P +HY +++LLG+AG ++A E +
Sbjct: 544 KVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELI 603
Query: 358 LRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRH 417
++P+EP+ IW +L+ CG K +A + + ++LL+ P + + +L N YA
Sbjct: 604 NKMPLEPDKTIWTSLLTACGTHK-NAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMW 662
Query: 418 IELTSLRKEMRIKGVRKAPGCSWIL 442
+L+ +R+ + G +++ G SWI+
Sbjct: 663 DQLSKVREAAKKLGAKES-GMSWII 686
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 15/280 (5%)
Query: 103 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 162
+NS+++ YV+ G+L +A F + + +W +ISGY AG + +A LF MP +
Sbjct: 145 MNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNV 204
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAH-----GFSPLNGTFAVLFGAMGSVAYLDQGR 217
++W +ISG+V ++ A+ M GF+ G A FG + L G+
Sbjct: 205 VSWNCLISGFV-DKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGL-----LTMGK 258
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF--SNMAYRDKIS-WNSMIMGLS 274
QLH VK+ E ++L+ MY+ CG + + +F +A ++ WNSM+ G
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 275 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 334
+ AL + + + L D+ T G L C + + G ++ +S+V G + +
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV-HSLVVVSGYELDY 377
Query: 335 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+++L G ++DA + RLP + A G + G
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRG 417
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 125/282 (44%), Gaps = 23/282 (8%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N++I+ YV L A ++FD + RN + WT M+SGY S G+ KA +L+ M D +
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAH-------GFSPLNGTFAVLFGAMGSVA--YLD 214
A + V +A L G++ G L G + M SV Y+
Sbjct: 104 AANEFMYSAV-----LKACGLVGDIQLGILVYERIGKENLRGDVVL----MNSVVDMYVK 154
Query: 215 QGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 273
GR + K I N+L+S Y K G +D++ +F M + +SWN +I G
Sbjct: 155 NGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGF 214
Query: 274 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 333
D G + AL M GL D L AC+ GL+ G +L +V S GL+
Sbjct: 215 VDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKS-GLESS 272
Query: 334 FDHYISIINLLGRAGKVKDAEEFVL--RLPVEPNHAIWGALV 373
++I++ G + A + +L V + A+W +++
Sbjct: 273 PFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 32/197 (16%)
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 267
G V +G + +K ++ + N+++SMY + D++++F M+ R+ ++W
Sbjct: 16 GKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWT 75
Query: 268 SMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKG---WE---- 319
+M+ G + G+ ++A+ +Y ML+ + + VL AC G + G +E
Sbjct: 76 TMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGK 135
Query: 320 --------LFNSMVNSYG---------------LQPGFDHYISIINLLGRAGKVKDAEEF 356
L NS+V+ Y L+P + ++I+ +AG + +A
Sbjct: 136 ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTL 195
Query: 357 VLRLPVEPNHAIWGALV 373
R+P +PN W L+
Sbjct: 196 FHRMP-QPNVVSWNCLI 211
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 242/497 (48%), Gaps = 45/497 (9%)
Query: 11 YEEALLLFLQMTLSDS-KPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGR 69
+ EA LF + + S K T+ +L AC L ++++ ++ NG++ + Y
Sbjct: 103 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQY--- 159
Query: 70 LRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTV--- 126
+ ++ M+ G++ A + + + S S+I+G+V G +A ELF +
Sbjct: 160 MMNRILLMHVKCGMIIDARRLFD-EIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEE 218
Query: 127 ------------------------------------PIRNKIAWTCMISGYLSAGQVFKA 150
+ N +I Y G + A
Sbjct: 219 LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDA 278
Query: 151 CDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
F+ MP++ ++AW ++I+GY + EA+ L +M G S T +++ +
Sbjct: 279 RCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKL 338
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
A L+ +Q H ++ +E +++ +LV Y+K G +D + +F + ++ ISWN+++
Sbjct: 339 AKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALM 398
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
G ++HGR ++A+ ++E M+ + P+ VTFL VL+ACA++GL ++GWE+F SM +G+
Sbjct: 399 GGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGI 458
Query: 331 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRAT 390
+P HY +I LLGR G + +A F+ R P++ +W AL+ C + + + ++
Sbjct: 459 KPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQE-NLELGRVVA 517
Query: 391 KRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVF 450
++L + P +V + N+Y + + E + + + KG+ P C+W+ V + H F
Sbjct: 518 EKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSF 577
Query: 451 SSGDRLEPHVEDILLQI 467
SGDR + + E + QI
Sbjct: 578 LSGDRFDSYNETVKRQI 594
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 40/221 (18%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A +G+ EEAL L M S + T + L+ L +Q HA LI NG
Sbjct: 296 VIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNG 355
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ + +N ++++ Y + G+++ A+
Sbjct: 356 FE---------------------SEIVAN--------------TALVDFYSKWGRVDTAR 380
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM----PDRDSIAWTSMISGYVQNE 176
+FD +P +N I+W ++ GY + G+ A LF+ M + + + +++S +
Sbjct: 381 YVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSG 440
Query: 177 LIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQG 216
L + +F M HG P +A + +G LD+
Sbjct: 441 LSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEA 481
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVLFGAMGSVA 211
L D+ + + S I V EA LF + + F T+ L A +
Sbjct: 78 LDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLK 137
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 271
+ ++++G + +E + + N ++ M+ KCG I D+ R+F + R+ S+ S+I
Sbjct: 138 SIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIIS 197
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
G + G EA +++ M E +T TF +L A A G + G +L V + L
Sbjct: 198 GFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLH---VCALKLG 254
Query: 332 PGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+ ++S +I++ + G ++DA +P E W ++
Sbjct: 255 VVDNTFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIA 298
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 191/354 (53%), Gaps = 5/354 (1%)
Query: 114 GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV 173
G L+ ++F + + + T ++ Y + AC +FD +P RD+++W + S Y+
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 174 QNELIAEAISLFGEMM--AHGFSPLNGTFAVL-FGAMGSVAYLDQGRQLHGMQVKTIYEY 230
+N+ + + LF +M G +G +L A ++ LD G+Q+H +
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 231 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 290
L L N+LVSMY++CG +D +Y++F M R+ +SW ++I GL+ +G EA+ + ML
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 291 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN-SYGLQPGFDHYISIINLLGRAGK 349
+FG+ P+ T G+L+AC+H+GLV +G F+ M + + ++P HY +++LLGRA
Sbjct: 311 KFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 350 VKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 409
+ A + + ++P+ IW L+G C + D ++ R L+EL A +V L N
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRV-HGDVELGERVISHLIELKAEEAGDYVLLLN 429
Query: 410 IYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 463
Y+ + ++T LR M+ K + PGCS I ++G VH F D P E+I
Sbjct: 430 TYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEI 483
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 178/328 (54%), Gaps = 13/328 (3%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIA-WTSMISGYVQNELIAEAISLFGEMMAHGF 193
T ++ Y S G V A +FD P++ +I WT+MIS Y +NE EAI LF M A
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 194 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE--YDLILENSLVSMYAKCGEIDDS 251
V A + + G +++ +K DL L NSL++MY K GE + +
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 252 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG------LYPDTVTFLGVL 305
++F +D ++ SMI G + +G+A E+L +++ M + P+ VTF+GVL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 306 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 365
AC+H+GLV++G F SM+ Y L+P H+ +++L R+G +KDA EF+ ++P++PN
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 366 HAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRK 425
IW L+G C L + ++ +R+ ELD + +VAL NIYA+ E + +R
Sbjct: 344 TVIWRTLLGACSLH-GNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRD 402
Query: 426 EMRIKGVRKAPGCSWILVKGRVHVFSSG 453
+R R+ PG SWI + ++ F SG
Sbjct: 403 RVR---KRRMPGKSWIELGSIINEFVSG 427
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 7/164 (4%)
Query: 199 TFAVLFGAMGSVAY----LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
+F+VLF S A LD GRQ+H + K + + ++ SLV Y+ G++D + ++
Sbjct: 64 SFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 255 FSNMAYRDKIS-WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 313
F + I W +MI +++ + EA+ +++ M + D V L+ACA G
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGA 182
Query: 314 VDKGWELFN-SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 356
V G E+++ S+ L S++N+ ++G+ + A +
Sbjct: 183 VQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKL 226
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 251/504 (49%), Gaps = 46/504 (9%)
Query: 1 MIGGFAWNG-FYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
++ G + G F EA+++F M + + +F S+ C + L RQ+H I
Sbjct: 246 LLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR 305
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNAL----EGNL--------NNFDDQS---LN 104
G++ G + L+ YS G+++ + E N+ +N DD LN
Sbjct: 306 GYESLLEVGNI---LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLN 362
Query: 105 SMINGY----VQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQV----------FKA 150
+G V L A + + + KI C+ +G++S V F+A
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEA 422
Query: 151 CD----LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 206
+ F+ + R+ I+W +MISG+ QN EA+ +F A P TF + A
Sbjct: 423 LEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNA 481
Query: 207 MGSVA--YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
+ + QG++ H +K ++ ++L+ MYAK G ID+S ++F+ M+ +++
Sbjct: 482 IAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF 541
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
W S+I S HG + ++ M++ + PD VTFL VLTAC G+VDKG+E+FN M
Sbjct: 542 VWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMM 601
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 384
+ Y L+P +HY ++++LGRAG++K+AEE + +P P ++ +++G C L +
Sbjct: 602 IEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRL-HGNVK 660
Query: 385 VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV- 443
+ ++ + +E+ P + +V + NIYA + + +RK MR K V K G SWI V
Sbjct: 661 MGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVG 720
Query: 444 --KGRVHV--FSSGDRLEPHVEDI 463
+G + + FSSGD+ P ++I
Sbjct: 721 DTEGSLTMQGFSSGDKSHPKSDEI 744
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 21/282 (7%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG--FSPLNG 198
Y AG+ A +F+++ D D ++W +++SG+ N++ A++ M + G F
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTY 177
Query: 199 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 258
+ A+ F +GS +L G QL VKT E DL++ NS ++MY++ G + R+F M
Sbjct: 178 STALSF-CVGSEGFL-LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEM 235
Query: 259 AYRDKISWNSMIMGLSDHGR-ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
+++D ISWNS++ GLS G EA+ ++ M+ G+ D V+F V+T C H +
Sbjct: 236 SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLA 295
Query: 318 WELFNSMVNSYGLQPGFDHYISIIN-LLGRAGK--VKDAEEFVLRLPVEPNHAIWGALVG 374
+ ++ ++ G++ + + N L+ R K V +A + V E N W ++
Sbjct: 296 RQ-----IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS 350
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 416
S D V+ R + P N V L N N++
Sbjct: 351 ----SNKDDAVSIFLNMRFDGVYP-NEVTFVGLINAVKCNEQ 387
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 42/272 (15%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
NS I Y ++G A+ +FD + ++ I+W ++SG G
Sbjct: 213 NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF---------------- 256
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
G+ EA+ +F +MM G + +F + L RQ+HG+
Sbjct: 257 -------GF-------EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLC 302
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
+K YE L + N L+S Y+KCG ++ +F M+ R+ +SW +MI D +A+
Sbjct: 303 IKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAV 357
Query: 284 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS-YGLQPGFDHYISIIN 342
+++ M G+YP+ VTF+G++ A + +G ++ + + + +P + S I
Sbjct: 358 SIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN--SFIT 415
Query: 343 LLGRAGKVKDA----EEFVLRLPVEPNHAIWG 370
L + ++DA E+ R + N I G
Sbjct: 416 LYAKFEALEDAKKAFEDITFREIISWNAMISG 447
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 10/208 (4%)
Query: 150 ACDLFDSMPDRDSIAWTSM---ISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 206
A LFD R+ A TS+ IS ++ A A+S+F E + G+ + L A
Sbjct: 27 AHKLFDGSSQRN--ATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLA 84
Query: 207 MGSV-AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS 265
+ + L +G Q+HG + + + + N+++ MY K G D++ IF N+ D +S
Sbjct: 85 LKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 266 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
WN+++ G D+ AL M G+ D T+ L+ C + G +L +++V
Sbjct: 145 WNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 326 NSYGLQPGFDHYISIINLLGRAGKVKDA 353
+ GL+ S I + R+G + A
Sbjct: 202 KT-GLESDLVVGNSFITMYSRSGSFRGA 228
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 214/459 (46%), Gaps = 76/459 (16%)
Query: 15 LLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSL 74
LL ++ D P+ TF L AC F +G+Q+H ++ NG L D
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSD--------- 151
Query: 75 VRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAW 134
G+VQ G L
Sbjct: 152 ----------------------------------GHVQTGVLRI---------------- 161
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
Y+ +F A +FD +P D + W +++GYV+ L +E + +F EM+ G
Sbjct: 162 ------YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 253
P + A V L QG+ +H ++ K E D+ + +LV MYAKCG I+ +
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 254 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAG 312
+F + R+ SW ++I G + +G A +A T + + E G+ PD+V LGVL ACAH G
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGG 335
Query: 313 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
+++G + +M YG+ P +HY I++L+ RAG++ DA + + ++P++P ++WGAL
Sbjct: 336 FLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGAL 395
Query: 373 VGVCGLSKTDADVASRATKRLLELDPLNAPGH----VALCNIYAANDRHIELTSLRKEMR 428
+ C K + ++ A + LL+L+ N V L NIY + R+ E +R +
Sbjct: 396 LNGCRTHK-NVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIE 454
Query: 429 IKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
+G+RK PG S + V G V F SGD P+ LLQI
Sbjct: 455 QRGIRKTPGWSLLEVDGIVTKFVSGDVSHPN----LLQI 489
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 9/254 (3%)
Query: 129 RNKIAWTCMISGYLSAGQVFK----ACDLFDSMPDRDSIAWTSMI---SGYVQNELIAEA 181
RN A + +++ +L + K A +FDS+ +S + +MI S Q L
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 182 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVS 240
L + +P TF L A + G+Q+H VK ++ D ++ ++
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
+Y + + D+ ++F + D + W+ ++ G G SE L V++ ML G+ PD +
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
LTACA G + +G + + ++ +++++ + G ++ A E +L
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 361 PVEPNHAIWGALVG 374
N W AL+G
Sbjct: 281 -TRRNVFSWAALIG 293
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 183/333 (54%), Gaps = 11/333 (3%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y+ + A +FD +P D + W +++GYV+ L +E + +F EM+ G P +
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 201 AVLFGAMGSVAYLDQGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
A V L QG+ +H ++ K+ E D+ + +LV MYAKCG I+ + +F +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
R+ SW ++I G + +G A +A+T E + E G+ PD+V LGVL ACAH G +++G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 319 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 378
+ +M Y + P +HY I++L+ RAG++ DA + ++P++P ++WGAL+ C
Sbjct: 342 SMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRT 401
Query: 379 SKTDADVASRATKRLLELDPLNAPGH----VALCNIYAANDRHIELTSLRKEMRIKGVRK 434
K + ++ A K LL+L+ N V L NIY + R+ E + +R + +GVRK
Sbjct: 402 HK-NVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRK 460
Query: 435 APGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
PG S + V G V F SGD P+ LLQI
Sbjct: 461 TPGWSVLEVDGNVTKFVSGDVSHPN----LLQI 489
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 129 RNKIAWTCMISGYLSAGQVFK----ACDLFDSMPDRDSIAWTSMI---SGYVQNELIAEA 181
RN A + +++ +L + K A +FDS+ +S + +MI S Q L
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 182 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVS 240
L + +P TF L A + G+Q+H VK ++ D ++ ++
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
+Y + + D+ ++F + D + W+ ++ G G SE L V+ ML GL PD +
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
LTACA G + +G + + ++ +++++ + G ++ A E +L
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 361 PVEPNHAIWGALVG 374
N W AL+G
Sbjct: 281 -TRRNVFSWAALIG 293
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 230/477 (48%), Gaps = 45/477 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ N EE L+LF +M ++ N T+ +L AC LS + G+ H L+ +G
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+L L SL+ MY G + A + ++ D +MI GY G + +A
Sbjct: 273 IELSSC---LVTSLLDMYVKCGDISNARRVFNEH-SHVDLVMWTAMIVGYTHNGSVNEAL 328
Query: 121 ELFDT---VPIR-NKIAWTCMISG----------------------------------YL 142
LF V I+ N + ++SG Y
Sbjct: 329 SLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYA 388
Query: 143 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
Q A +F+ ++D +AW S+ISG+ QN I EA+ LF M + +P T A
Sbjct: 389 KCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVAS 448
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKT--IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
LF A S+ L G LH VK + + + +L+ YAKCG+ + IF +
Sbjct: 449 LFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE 508
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
++ I+W++MI G G +L ++E ML+ P+ TF +L+AC H G+V++G +
Sbjct: 509 KNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKY 568
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
F+SM Y P HY ++++L RAG+++ A + + ++P++P+ +GA + CG+
Sbjct: 569 FSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM-H 627
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 437
+ D+ K++L+L P +A +V + N+YA++ R + +R M+ +G+ K G
Sbjct: 628 SRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAG 684
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 148/282 (52%), Gaps = 12/282 (4%)
Query: 98 FDDQSLNSMINGYVQAGQLEKAQEL---FDTVPIRNKIAWTCMISGYLSAGQVFKACDLF 154
+DD + + + L+ +++ VP + + T ++ Y G++ A +F
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVF 199
Query: 155 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 214
+ + R+ + WTSMI+GYV+N+L E + LF M + T+ L A ++ L
Sbjct: 200 NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH 259
Query: 215 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 274
QG+ HG VK+ E L SL+ MY KCG+I ++ R+F+ ++ D + W +MI+G +
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 275 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG- 333
+G +EAL++++ M + P+ VT VL+ C GL++ EL S V+ ++ G
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIEN-LELGRS-VHGLSIKVGI 374
Query: 334 FDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+D + +++++ + + +DA ++V + E + W +++
Sbjct: 375 WDTNVANALVHMYAKCYQNRDA-KYVFEMESEKDIVAWNSII 415
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 111/224 (49%), Gaps = 9/224 (4%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
+FD +P+ D W M+ Y N+ E + L+ +M HGF + F+ A +
Sbjct: 98 VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD 157
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
LD G+++H VK + +D ++ L+ MYAKCGEI ++++F+++ R+ + W SMI G
Sbjct: 158 LDNGKKIHCQLVK-VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 332
+ E L ++ M E + + T+ ++ AC + +G +V S G++
Sbjct: 217 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS-GIEL 275
Query: 333 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH---AIWGALV 373
S++++ + G + +A R+ E +H +W A++
Sbjct: 276 SSCLVTSLLDMYVKCGDISNAR----RVFNEHSHVDLVMWTAMI 315
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 9/181 (4%)
Query: 204 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 263
F + +D RQ HG+ D+ + LVS+Y G D+ +F + D
Sbjct: 48 FLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 264 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 323
W M+ + + E + +Y+ +++ G D + F L AC +D G ++
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 324 MVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 381
+V P FD+ + ++++ + G++K A + + + N W +++ G K
Sbjct: 168 LVKV----PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIA--GYVKN 220
Query: 382 D 382
D
Sbjct: 221 D 221
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 183/336 (54%), Gaps = 11/336 (3%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
T ++ Y G + A LFD MP RD +W ++I+G V +EA+ L+ M G
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQL-HGMQVKTIYEYD-LILENSLVSMYAKCGEIDDSY 252
T GA + + +G + HG Y D +I+ N+ + MY+KCG +D +Y
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHG------YSNDNVIVSNAAIDMYSKCGFVDKAY 261
Query: 253 RIFSNMA-YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
++F + ++WN+MI G + HG A AL +++ + + G+ PD V++L LTAC HA
Sbjct: 262 QVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHA 321
Query: 312 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 371
GLV+ G +FN+M G++ HY +++LL RAG++++A + + + + P+ +W +
Sbjct: 322 GLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQS 380
Query: 372 LVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 431
L+G + +D ++A A++ + E+ N V L N+YAA R ++ +R +M K
Sbjct: 381 LLGASEIY-SDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQ 439
Query: 432 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
V+K PG S+I KG +H F + D+ +I +I
Sbjct: 440 VKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKI 475
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 20/283 (7%)
Query: 103 LNSMINGYVQAGQLEKAQELFDTVP------IRNKIAWTCMISGYLSAGQVFKACDLFDS 156
+ +MI V Q+++ Q F T +R+++ C IS + G + A +F
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPF---GDLSFAVQIFRY 62
Query: 157 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-----GFSPLNG-TFAVLFGAMGSV 210
+P + W ++I G+ + + A S + M+ ++ T + A
Sbjct: 63 IPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARA 122
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
QLH + D +L +L+ Y+K G++ +Y++F M RD SWN++I
Sbjct: 123 LCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALI 182
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
GL RASEA+ +Y+ M G+ VT + L AC+H G V +G +F+ N +
Sbjct: 183 AGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI 242
Query: 331 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ I++ + G V A + + + + W ++
Sbjct: 243 VSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 237/488 (48%), Gaps = 68/488 (13%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI + G ++EA+ LF M KPN T S+ CAG++ LG+ +H I
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAI--- 428
Query: 61 WKLD-DYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
K D + + +++ MY+ G A A E L D + N++ GY Q G KA
Sbjct: 429 -KADIESELETATAVISMYAKCGRFSPALKAFE-RLPIKDAVAFNALAQGYTQIGDANKA 486
Query: 120 QELFDTVPI-------RNKIAW--TCMIS-----GYLSAGQV------------------ 147
+++ + + R + TC G GQ+
Sbjct: 487 FDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINM 546
Query: 148 FKACD-------LFDSMP-DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
F CD LFD ++ +++W M++GY+ + EA++ F +M F P T
Sbjct: 547 FTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVT 606
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
F + A ++ L G +H ++ + + NSLV MYAKCG I+ S + F ++
Sbjct: 607 FVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS 666
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
+ +SWN+M+ + HG AS A++++ +M E L PD+V+FL VL+AC HAGLV++G
Sbjct: 667 NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKR 726
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV---- 375
+F M + ++ +HY +++LLG+AG +A E + R+ V+ + +WGAL+
Sbjct: 727 IFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMH 786
Query: 376 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 435
C L ++A A +L++L+PLN P H Y+ + R E+ ++ + ++K
Sbjct: 787 CNLWLSNA-----ALCQLVKLEPLN-PSH------YSQDRRLGEVNNVSR------IKKV 828
Query: 436 PGCSWILV 443
P CSWI V
Sbjct: 829 PACSWIEV 836
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 200/472 (42%), Gaps = 60/472 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M+ G A NG ALLLF M + + +L A + L + R LH +I G
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ G L+ MY + YA+ ++ + D+ S +M+ Y G E+
Sbjct: 232 FIFAFSSG-----LIDMYCNCADL-YAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVL 285
Query: 121 ELFDTV---PIR-NKIAW-----------------------------------TCMISGY 141
ELFD + +R NK+A T ++S Y
Sbjct: 286 ELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMY 345
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G++ A LF ++ DRD ++W++MI+ Y Q EAISLF +MM P T
Sbjct: 346 SKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLT 405
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
+ VA G+ +H +K E +L +++SMYAKCG + + F + +
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
D +++N++ G + G A++A VY+ M G+ PD+ T +G+L CA +G ++
Sbjct: 466 DAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVY 525
Query: 322 NSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 377
++ + GFD ++IN+ + + A + E + W ++ G
Sbjct: 526 GQII-----KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMN--G 578
Query: 378 LSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 429
+ AT R ++++ P V NI A EL++LR M +
Sbjct: 579 YLLHGQAEEAVATFRQMKVEKFQ-PNAVTFVNIVRAA---AELSALRVGMSV 626
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVA 211
+FDS+ D + W SMI GY + L EA+ FG M G P +F A
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 271
+G ++H + + E D+ + +LV MY K ++ + ++F M +D ++WN+M+
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA-----------CAHAGLVDKGW 318
GL+ +G +S AL ++ M + D V+ ++ A C H ++ KG+
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 152/364 (41%), Gaps = 52/364 (14%)
Query: 51 QLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGY 110
Q+H LIV+G K + L+ YS+F D S + ++ + NSMI GY
Sbjct: 23 QVHGSLIVSGLKPHN-------QLINAYSLFQRQDL-SRVIFDSVRDPGVVLWNSMIRGY 74
Query: 111 VQAGQLEKAQELF------------------------------DTVPIRNKIAW------ 134
+AG +A F + I + IA
Sbjct: 75 TRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESD 134
Query: 135 ----TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 190
T ++ Y A + A +FD M +D + W +M+SG QN + A+ LF +M +
Sbjct: 135 VYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRS 194
Query: 191 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 250
+ + L A+ + D R LHG+ +K + + + L+ MY C ++
Sbjct: 195 CCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYA 252
Query: 251 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 310
+ +F + +D+ SW +M+ + +G E L +++ M + + + V L A A+
Sbjct: 253 AESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAY 312
Query: 311 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 370
G + KG + + V GL S++++ + G+++ AE+ + + + + W
Sbjct: 313 VGDLVKGIAIHDYAVQQ-GLIGDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSWS 370
Query: 371 ALVG 374
A++
Sbjct: 371 AMIA 374
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 223/451 (49%), Gaps = 55/451 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISL-AYACAGLSFPYLGRQLHAQLIVN 59
+I + G Y+ +L LF M S +PN TF SL AC+ S Y G LH Q +
Sbjct: 57 LIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSY-GVALHGQALKR 115
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDD------QSLNSMINGYVQA 113
G+ D + ++ S VR Y G LE + FDD + NS+++ +
Sbjct: 116 GFLWDPF---VQTSFVRFYGEVG-------DLESSRKMFDDILNPCVVACNSLLDACGRN 165
Query: 114 GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV 173
G+++ A E F +P+ + ++WT +I+G+ G
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKG---------------------------- 197
Query: 174 QNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ-----GRQLHGMQVKTIY 228
L A+A+ +FGEM+ + + + A + S A DQ G+Q+HG +
Sbjct: 198 ---LHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEI 254
Query: 229 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 288
L +L+ MY K G+++ + IF + + +WN++I L+ +GR +AL ++E
Sbjct: 255 ILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEM 314
Query: 289 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 348
M ++P+ +T L +LTACA + LVD G +LF+S+ + Y + P +HY +++L+GRAG
Sbjct: 315 MKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAG 374
Query: 349 KVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALC 408
+ DA F+ LP EP+ ++ GAL+G C + + + ++ + K+L+ L P + +VAL
Sbjct: 375 LLVDAANFIQSLPFEPDASVLGALLGACKIHE-NTELGNTVGKQLIGLQPQHCGQYVALS 433
Query: 409 NIYAANDRHIELTSLRKEMRIKGVRKAPGCS 439
A + E +RK M G+RK P S
Sbjct: 434 TFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 160 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
+ + ++I Y+ +++LF M+A P N TF L A S + G L
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 220 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN---------------------- 257
HG +K + +D ++ S V Y + G+++ S ++F +
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 258 ---------MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG---LYPDTVTFLGVL 305
M D +SW ++I G S G ++AL V+ M++ + P+ TF+ VL
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 306 TACAH 310
++CA+
Sbjct: 229 SSCAN 233
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 214/423 (50%), Gaps = 48/423 (11%)
Query: 84 MDYASNALEG--NLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCM 137
M+YA++ G + FD N+MI GYV E+A ++ + R + + C+
Sbjct: 82 MNYAASIFRGIDDPCTFD---FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 138 IS----------GYLSAGQVFK-------------------------ACDLFDSMPDRDS 162
+ G GQVFK + +F+ + + +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHG--FSPLNGTFAVLFGAMGSVAYLDQGRQLH 220
+W+SM+S + +E + LF M + + +G + L A + L+ G +H
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALL-ACANTGALNLGMSIH 257
Query: 221 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 280
G ++ I E ++I++ SLV MY KCG +D + IF M R+ +++++MI GL+ HG
Sbjct: 258 GFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGE 317
Query: 281 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 340
AL ++ M++ GL PD V ++ VL AC+H+GLV +G +F M+ ++P +HY +
Sbjct: 318 SALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCL 377
Query: 341 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 400
++LLGRAG +++A E + +P+E N IW + C + + + ++ A + LL+L N
Sbjct: 378 VDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRV-RQNIELGQIAAQELLKLSSHN 436
Query: 401 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 460
++ + N+Y+ ++ R E+ IKG+++ PG S + +KG+ H F S DR P
Sbjct: 437 PGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKC 496
Query: 461 EDI 463
++I
Sbjct: 497 KEI 499
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 44/265 (16%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G+ +EEAL + +M ++P+ T+ L AC L G+Q+H Q+ G
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLG 162
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLE--- 117
+ D + ++ SL+ MY G M+ +S E L + S +SM++ G
Sbjct: 163 LEADVF---VQNSLINMYGRCGEMELSSAVFE-KLESKTAASWSSMVSARAGMGMWSECL 218
Query: 118 ------------KAQE-------------------------LFDTVPIRNKIAWTCMISG 140
KA+E L + N I T ++
Sbjct: 219 LLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDM 278
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y+ G + KA +F M R+++ +++MISG + A+ +F +M+ G P + +
Sbjct: 279 YVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVY 338
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVK 225
+ A + +GR++ +K
Sbjct: 339 VSVLNACSHSGLVKEGRRVFAEMLK 363
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 178/326 (54%), Gaps = 7/326 (2%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSP 195
+I + G+ A + + D++ I W MI GYV+N EA+ M++ P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 196 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 255
+FA A + L + +H + + + E + IL ++LV +YAKCG+I S +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 256 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 315
++ D WN+MI G + HG A+EA+ V+ M + PD++TFLG+LT C+H GL++
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 316 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 375
+G E F M + +QP +HY ++++LLGRAG+VK+A E + +P+EP+ IW +L+
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 376 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 435
K + ++ A + L + +V L NIY++ + +R+ M +G+RKA
Sbjct: 344 SRTYK-NPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKA 399
Query: 436 PGCSWILVKGRVHVFSSGDRLEPHVE 461
G SW+ G +H F +GD H+E
Sbjct: 400 KGKSWLEFGGMIHRFKAGD--TSHIE 423
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 130 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 189
N I + ++ Y G + + ++F S+ D W +MI+G+ + L EAI +F EM
Sbjct: 199 NAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 258
Query: 190 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGE 247
A SP + TF L L++G++ G+ + + LE+ ++V + + G
Sbjct: 259 AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR-FSIQPKLEHYGAMVDLLGRAGR 317
Query: 248 IDDSYRIFSNMAYR-DKISWNSMI 270
+ ++Y + +M D + W S++
Sbjct: 318 VKEAYELIESMPIEPDVVIWRSLL 341
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 221/479 (46%), Gaps = 43/479 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I A +G EE+ +F +M P+G L + G+ H +I +
Sbjct: 302 IIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHC 361
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ LD + SL+ MY F L+ A + ++ N+M+ GY + K
Sbjct: 362 FSLDS---TVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCI 418
Query: 121 ELF----------DTVPIRNKIAWTCMISGYL----------------SAGQVFKACDLF 154
ELF D+ + I+ I L + V DL+
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478
Query: 155 DSM------------PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
M D + I W +MI+ YV E +AI+LF M++ F P + T
Sbjct: 479 GKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVT 538
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 262
L A + L++G+ +H +T +E +L L +L+ MYAKCG ++ S +F +D
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKD 598
Query: 263 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
+ WN MI G HG A+ +++ M E + P TFL +L+AC HAGLV++G +LF
Sbjct: 599 AVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFL 658
Query: 323 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 382
M + Y ++P HY +++LL R+G +++AE V+ +P P+ IWG L+ C ++ +
Sbjct: 659 KM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC-MTHGE 716
Query: 383 ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
++ R +R + DP N ++ L N+Y+A + E R+ MR GV K G S +
Sbjct: 717 FEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 173/412 (41%), Gaps = 53/412 (12%)
Query: 8 NGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYD 67
NG Y +L F M LS P+ T + ACA L + ++G +H ++ +G D +
Sbjct: 103 NGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGF--DRN 160
Query: 68 GRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLE---------- 117
+ S V YS G + A + + + D + ++I+G+VQ G+ E
Sbjct: 161 TAVGASFVYFYSKCGFLQDACLVFD-EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMH 219
Query: 118 ---------------------------KAQELFDTVPIRN-----KIAWTCMISGYLSAG 145
K ++N K + M S Y +G
Sbjct: 220 SAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSG 279
Query: 146 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 205
+A F + D D +WTS+I+ ++ + E+ +F EM G P + L
Sbjct: 280 NPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLIN 339
Query: 206 AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKI 264
+G + + QG+ HG ++ + D + NSL+SMY K + + ++F ++ +K
Sbjct: 340 ELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKE 399
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
+WN+M+ G + + ++ + G+ D+ + V+++C+H G V L
Sbjct: 400 AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAV-----LLGKS 454
Query: 325 VNSYGLQPGFDHYISIIN-LLGRAGKVKD-AEEFVLRLPVEPNHAIWGALVG 374
++ Y ++ D IS++N L+ GK+ D + + + N W A++
Sbjct: 455 LHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIA 506
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 7/287 (2%)
Query: 129 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 188
RN + Y G + AC +FD MPDRD +AWT++ISG+VQN + +M
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 189 MAHGF---SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 245
+ G P T F A ++ L +GR LHG VK +++S+ S Y+K
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 246 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 305
G ++Y F + D SW S+I L+ G E+ ++ M G++PD V ++
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 306 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 365
LV +G + F+ V + S++++ + + AE+ R+ E N
Sbjct: 339 NELGKMMLVPQG-KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGN 397
Query: 366 HAIWGALVGVCGLSKTDADVAS--RATKRL-LELDPLNAPGHVALCN 409
W ++ G K R + L +E+D +A ++ C+
Sbjct: 398 KEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCS 444
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+IS Y S G+ + +F + RD W S+I + N A ++ F M+ G SP
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPD 124
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEIDDSYRIF 255
+ T ++ A + + G +HG+ +K ++ + + S V Y+KCG + D+ +F
Sbjct: 125 HFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF 184
Query: 256 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL---YPDTVTFLGVLTACAHAG 312
M RD ++W ++I G +G + L M G P+ T AC++ G
Sbjct: 185 DEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLG 244
Query: 313 LVDKG 317
+ +G
Sbjct: 245 ALKEG 249
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 232/496 (46%), Gaps = 48/496 (9%)
Query: 12 EEALLLFLQMTLSDSKPNGETFISLAYAC-AGLSFPYLGRQLHAQLIVNGWKLDDYDGRL 70
+E L L+ QM +P+ TF AC +GL G + + + G+K D + +
Sbjct: 98 DEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEK-GEAVWCKAVDFGYKNDVF---V 153
Query: 71 RRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF------- 123
S++ +Y G MD A L G + D +M+ G+ QAG+ KA E +
Sbjct: 154 CSSVLNLYMKCGKMDEA-EVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG 212
Query: 124 -------------------DTVPIR-------------NKIAWTCMISGYLSAGQVFKAC 151
DT R N + T ++ Y G + A
Sbjct: 213 FGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVAS 272
Query: 152 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 211
+F M + +++W S+ISG+ QN L +A EM + GF P T + A V
Sbjct: 273 RVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVG 332
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 271
L GR +H +K + D + +L+ MY+KCG + S IF ++ +D + WN+MI
Sbjct: 333 SLKTGRLVHCYILKR-HVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMIS 391
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
HG E ++++ M E + PD TF +L+A +H+GLV++G F+ M+N Y +Q
Sbjct: 392 CYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQ 451
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 391
P HY+ +I+LL RAG+V++A + + ++ IW AL+ C ++ + V A
Sbjct: 452 PSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGC-INHRNLSVGDIAAN 510
Query: 392 RLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFS 451
++L+L+P + + N +A ++ E+ +RK MR + K PG S I V G + F
Sbjct: 511 KILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFL 570
Query: 452 SGDRLEPHVEDILLQI 467
D L H +LQ+
Sbjct: 571 MED-LSHHEHYHMLQV 585
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 7/270 (2%)
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
G++ A +FD +P R + SMI Y + + E + L+ +M+A P + TF +
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
A S L++G + V Y+ D+ + +S++++Y KCG++D++ +F MA RD I
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
W +M+ G + G++ +A+ Y M G D V LG+L A G G + +
Sbjct: 184 CWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 384
+ GL S++++ + G ++ A R+ + + WG+L+ G ++
Sbjct: 244 YRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVS-WGSLIS--GFAQN--G 297
Query: 385 VASRATKRLLELDPLN-APGHVALCNIYAA 413
+A++A + ++E+ L P V L + A
Sbjct: 298 LANKAFEAVVEMQSLGFQPDLVTLVGVLVA 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 234 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 293
+ L++ + GEI + ++F + R +NSMI+ S E L +Y+ M+
Sbjct: 52 ISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEK 111
Query: 294 LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 353
+ PD+ TF + AC +++KG ++ V+ +G + S++NL + GK+ +A
Sbjct: 112 IQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVD-FGYKNDVFVCSSVLNLYMKCGKMDEA 170
Query: 354 E 354
E
Sbjct: 171 E 171
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 223/437 (51%), Gaps = 42/437 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G +EAL+ + +M KP+ + L A A G QLH ++ G
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRG 335
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D+ L+ +++ Y+V SN ++ L F+
Sbjct: 336 FDCYDF---LQATIIHFYAV-------SNDIKLALQQFE--------------------A 365
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+ D + RN +I+G++ G V +A ++FD D+D +W +MISGY Q+
Sbjct: 366 SVKDHIASRNA-----LIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL 420
Query: 181 AISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLHG-MQVKTIYEYDLILENSL 238
A+ LF EM++ P T +F A+ S+ L++G++ H + TI D L ++
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPND-NLTAAI 479
Query: 239 VSMYAKCGEIDDSYRIF---SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 295
+ MYAKCG I+ + IF N++ WN++I G + HG A AL +Y + +
Sbjct: 480 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK 539
Query: 296 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 355
P+++TF+GVL+AC HAGLV+ G F SM + +G++P HY +++LLG+AG++++A+E
Sbjct: 540 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKE 599
Query: 356 FVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 415
+ ++PV+ + IWG L+ + + ++A A L +DP + V L N+YA
Sbjct: 600 MIKKMPVKADVMIWGMLLSA-SRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAG 658
Query: 416 RHIELTSLRKEMRIKGV 432
R ++ +R+EMR + V
Sbjct: 659 RWEDVALVREEMRTRDV 675
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 166/385 (43%), Gaps = 68/385 (17%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A N + EA+ LF +M N T ++ AC+ L
Sbjct: 144 LIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLG---------------- 187
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+D R+ +SL + G + ++N +++ Y L+ A+
Sbjct: 188 ---GIWDCRMLQSLAIKLKLEGRVFVSTN----------------LLHMYCLCLCLKDAR 228
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
+LFD +P RN + W M++GY AG + +A +LFD + ++D ++W +MI G ++ + E
Sbjct: 229 KLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDE 288
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE-YDLIL----- 234
A+ + EM+ G P L A +G QLHG VK ++ YD +
Sbjct: 289 ALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIH 348
Query: 235 -------------------------ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 269
N+L++ + K G ++ + +F +D SWN+M
Sbjct: 349 FYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAM 408
Query: 270 IMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 328
I G + AL ++ M+ + PD +T + V +A + G +++G + + +N
Sbjct: 409 ISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG-KRAHDYLNFS 467
Query: 329 GLQPGFDHYISIINLLGRAGKVKDA 353
+ P + +II++ + G ++ A
Sbjct: 468 TIPPNDNLTAAIIDMYAKCGSIETA 492
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 36/265 (13%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
NS++N Y + L A+ +F + ++ M+ GY+ + +++ A LFD MP+R +
Sbjct: 80 NSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCV 139
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
++T++I GY QN +EA+ LF EM G T A + A + + R L +
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG------ 277
+K E + + +L+ MY C + D+ ++F M R+ ++WN M+ G S G
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAE 259
Query: 278 -------------------------RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 312
+ EAL Y ML G+ P V + +L+A A +
Sbjct: 260 ELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSV 319
Query: 313 LVDKGWELFNSMVNSYGLQPGFDHY 337
KG +L ++V + GFD Y
Sbjct: 320 GSSKGLQLHGTIV-----KRGFDCY 339
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 199 TFAVLFGAMGSVAYLDQ---GRQLHGMQVKTIYEYDLILENSLVSMYAKC---------- 245
T L A+GS A + GRQ+H +K+ + + + NS+++MYAKC
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 246 ---GEID------------------DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 284
++D D+ ++F M R +S+ ++I G + + + SEA+
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 285 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE--LFNSMVNSYGLQPGFDHYISIIN 342
++ M G+ + VT V++AC+H G + W+ + S+ L+ ++++
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGI---WDCRMLQSLAIKLKLEGRVFVSTNLLH 216
Query: 343 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
+ +KDA + +P E N W ++ G SK
Sbjct: 217 MYCLCLCLKDARKLFDEMP-ERNLVTWNVMLN--GYSK 251
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 202/433 (46%), Gaps = 78/433 (18%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQ------------ 146
D ++N ++ YV+ ++ A++LFD + N ++WT +ISGY G+
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 147 --------------VFKACD---------------------------------------- 152
VFKAC
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 153 -----LFDSMPD--RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF--AVL 203
+FDSM R+ ++WTSMI+ Y QN EAI LF A S F A +
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 204 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 263
A S+ L G+ HG+ + YE + ++ SL+ MYAKCG + + +IF +
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 264 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 323
IS+ SMIM + HG A+ +++ M+ + P+ VT LGVL AC+H+GLV++G E +
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 362
Query: 324 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV--EPNHAIWGALVGVCGLSKT 381
M YG+ P HY ++++LGR G+V +A E + V E +WGAL+ G
Sbjct: 363 MAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSA-GRLHG 421
Query: 382 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
++ S A+KRL++ + ++AL N YA + + SLR EM+ G K CSWI
Sbjct: 422 RVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWI 481
Query: 442 LVKGRVHVFSSGD 454
K V+VF +GD
Sbjct: 482 ENKDSVYVFHAGD 494
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 3/187 (1%)
Query: 168 MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI 227
M G++QN +A A SLF + F L T A L + LH + +K
Sbjct: 1 MKKGFIQNVHLAPATSLFVPQYKNDFFHLK-TKAFLVHKLSESTNAAFTNLLHTLTLKLG 59
Query: 228 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYE 287
+ D N LV Y K EI+ + ++F M + +SW S+I G +D G+ AL++++
Sbjct: 60 FASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQ 119
Query: 288 TMLE-FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 346
M E + P+ TF V AC+ G + + S GL+ S++++ G+
Sbjct: 120 KMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEIS-GLRRNIVVSSSLVDMYGK 178
Query: 347 AGKVKDA 353
V+ A
Sbjct: 179 CNDVETA 185
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 174/336 (51%), Gaps = 8/336 (2%)
Query: 135 TCMISGYLSAGQVFKAC-DLFDSMPD-RDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 192
T +I Y + + C LF M RD +AW +I+ + + AI LFG++
Sbjct: 306 TALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEK 364
Query: 193 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 252
SP TF+ + A + +H +K + D +L NSL+ YAKCG +D
Sbjct: 365 LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCM 424
Query: 253 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 312
R+F +M RD +SWNSM+ S HG+ L V++ M + PD+ TF+ +L+AC+HAG
Sbjct: 425 RVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAG 481
Query: 313 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 372
V++G +F SM P +HY +I++L RA + +AEE + ++P++P+ +W AL
Sbjct: 482 RVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIAL 541
Query: 373 VGVCGLSKTDADVASRATKRLLEL-DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 431
+G C + + A +L EL +P N+ ++ + NIY A E KEM
Sbjct: 542 LGSCR-KHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWR 600
Query: 432 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 467
VRK P SW + +VH F+SG R P E + ++
Sbjct: 601 VRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYREL 636
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 129 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 188
+N I +I+ Y G + A +FD+MP+R+ ++WT++I+GYVQ E LF M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 189 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 248
++H F P T L + S Y + G+Q+HG+ +K + + N+++SMY +C +
Sbjct: 154 LSHCF-PNEFT---LSSVLTSCRY-EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 249 DDSYR---IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 305
+Y +F + +++ ++WNSMI +A+ V+ M G+ D T L +
Sbjct: 209 AAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNIC 268
Query: 306 TA 307
++
Sbjct: 269 SS 270
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY--DLILENSLVSMYAKCGEIDDSYRIFSN 257
+A LF A L G LH + Y Y ++IL N L++MYAKCG I + ++F
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 308
M R+ +SW ++I G G E ++ +ML +P+ T VLT+C
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFTLSSVLTSC 171
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
Query: 6 AWNGFY--------EEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLI 57
AWNG E A+ LF Q+ P+ TF S+ ACAGL +HAQ+I
Sbjct: 337 AWNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVI 396
Query: 58 VNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLE 117
G+ D L SL+ Y+ G +D + ++++ D S NSM+ Y GQ++
Sbjct: 397 KGGFLADTV---LNNSLIHAYAKCGSLDLCMRVFD-DMDSRDVVSWNSMLKAYSLHGQVD 452
Query: 118 KAQELFDTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI-----AWTSMISG 171
+F + I + + ++S AG+V + +F SM ++ + +I
Sbjct: 453 SILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDM 512
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
+ E AEA + +M P++ V +GS
Sbjct: 513 LSRAERFAEAEEVIKQM------PMDPDAVVWIALLGSC 545
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 172/324 (53%), Gaps = 4/324 (1%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I+ Y + A +F + W S+ISGY Q EA L EM+ GF P
Sbjct: 321 LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPN 380
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHG--MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
+ T A + +A L G++ H ++ K +Y + L NSLV +YAK G+I + ++
Sbjct: 381 SITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM-LWNSLVDVYAKSGKIVAAKQV 439
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
M+ RD++++ S+I G + G AL +++ M G+ PD VT + VL+AC+H+ LV
Sbjct: 440 SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLV 499
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
+G LF M YG++P H+ +++L GRAG + A++ + +P +P+ A W L+
Sbjct: 500 HEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLN 559
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 434
C + + + A ++LLE+ P N +V + N+YAA +L +R MR GV+K
Sbjct: 560 ACHI-HGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKK 618
Query: 435 APGCSWILVKGRVHVFSSGDRLEP 458
PGC+WI +FS GD P
Sbjct: 619 DPGCAWIDTDSGFSLFSVGDTSSP 642
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 154/361 (42%), Gaps = 43/361 (11%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I +A N +EE + + +M +P+ T+ S+ AC GR +H + V+
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSS 174
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+K Y + +L+ MY F M A +
Sbjct: 175 YKSSLY---VCNALISMYKRFRNMGIA--------------------------------R 199
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM----PDRDSIAWTSMISGYVQNE 176
LFD + R+ ++W +I+ Y S G +A +LFD M + I W + G +Q
Sbjct: 200 RLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Query: 177 LIAEAISLFGEMMAHGFSPLNGTFAVLFG--AMGSVAYLDQGRQLHGMQVKTIYEYDLIL 234
A+ L M F A++ G A + + G+++HG+ + + Y+ +
Sbjct: 260 NYVGALGLISRM--RNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNV 317
Query: 235 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
N+L++MY+KC ++ + +F +WNS+I G + ++ EA + ML G
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF 377
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 354
P+++T +L CA + G E ++ + + S++++ ++GK+ A+
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 355 E 355
+
Sbjct: 438 Q 438
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 144 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 203
A + + D+ +P W +I+ Y +NEL E I+ + M++ G P T+ +
Sbjct: 97 AQSIIENSDILHPLP------WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSV 150
Query: 204 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 263
A G + GR +HG + Y+ L + N+L+SMY + + + R+F M RD
Sbjct: 151 LKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDA 210
Query: 264 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 312
+SWN++I + G SEA +++ M G+ +T+ + C G
Sbjct: 211 VSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 131/334 (39%), Gaps = 52/334 (15%)
Query: 3 GGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWK 62
GG G Y AL L +M + + I AC+ + LG+++H I +
Sbjct: 253 GGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHS--- 309
Query: 63 LDDYDG--RLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
YDG +R +L+ MYS + +A N + NS+I+GY Q + E+A
Sbjct: 310 --SYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN-SLCTWNSIISGYAQLNKSEEAS 366
Query: 121 ELF----------------DTVPIRNKIA------------------------WTCMISG 140
L +P+ +IA W ++
Sbjct: 367 HLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDV 426
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y +G++ A + D M RD + +TS+I GY A++LF EM G P + T
Sbjct: 427 YAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTV 486
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRIFSNM 258
+ A + +G +L M+++ Y L++ +V +Y + G + + I NM
Sbjct: 487 VAVLSACSHSKLVHEGERLF-MKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNM 545
Query: 259 AYRDK-ISWNSMIMGLSDHGRASEALTVYETMLE 291
Y+ +W +++ HG E +LE
Sbjct: 546 PYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE 579
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 99/231 (42%), Gaps = 40/231 (17%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A EEA L +M ++ +PN T S+ CA ++ G++ H +
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI---- 407
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
LRR + Y++ NS+++ Y ++G++ A+
Sbjct: 408 ---------LRRKCFKDYTML---------------------WNSLVDVYAKSGKIVAAK 437
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWTSMISGYVQNE 176
++ D + R+++ +T +I GY + G+ A LF M D + +++S ++
Sbjct: 438 QVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSK 497
Query: 177 LIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQ-LHGMQVK 225
L+ E LF +M +G P F+ + G +L + + +H M K
Sbjct: 498 LVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYK 548
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 228/483 (47%), Gaps = 52/483 (10%)
Query: 1 MIGGFAWNGF-YEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
+I G A GF +E+LL+F +M + +P TF+S+ +C S +G Q+H I
Sbjct: 263 VIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKT 317
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG----- 114
G+ + Y + + + MYS F A E +L D + N+MI+ Y QA
Sbjct: 318 GY--EKYT-LVSNATMTMYSSFEDFGAAHKVFE-SLEEKDLVTWNTMISSYNQAKLGKSA 373
Query: 115 ------------------------------QLEKAQELFDTVPIRNKIAWT-CMISGYLS 143
LE Q + +KI + +IS Y
Sbjct: 374 MSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSK 433
Query: 144 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS--PLNGTFA 201
GQ+ KA LF+ ++ I+W ++ISG+ N E + F ++ P T +
Sbjct: 434 NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLS 493
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
L S + L G Q H ++ + ++ N+L++MY++CG I +S +F+ M+ +
Sbjct: 494 TLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEK 553
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWEL 320
D +SWNS+I S HG A+ Y+TM + G + PD TF VL+AC+HAGLV++G E+
Sbjct: 554 DVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEI 613
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL--RLPVEPNHAIWGALVGVCGL 378
FNSMV +G+ DH+ +++LLGRAG + +AE V + +W AL C
Sbjct: 614 FNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACA- 672
Query: 379 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
+ D + K L+E + + +V L NIYA E R+ + + G K GC
Sbjct: 673 AHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGC 732
Query: 439 SWI 441
SW+
Sbjct: 733 SWM 735
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N++++ Y + G L ++ FD + + +WT ++S G + A ++FD MP+RD +
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 164 A-WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
A W +MI+G ++ ++ LF EM G FA + +M LD G+Q+H +
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDYGSLDFGKQVHSL 214
Query: 223 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF--SNMAYRDKISWNSMIMGLSDHGRAS 280
+K + + N+L++MY C + D+ +F +++A RD++++N +I GL+ R
Sbjct: 215 VIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-D 273
Query: 281 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 340
E+L V+ MLE L P +TF+ V+ +C+ A + V+ ++ G++ Y +
Sbjct: 274 ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM--------GHQVHGLAIKTGYEKYTLV 325
Query: 341 IN 342
N
Sbjct: 326 SN 327
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 117/239 (48%), Gaps = 11/239 (4%)
Query: 137 MISGYLSAGQVFKACDLFDS--MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
+I+ Y + V AC +F+ + RD + + +I G + E++ +F +M+
Sbjct: 230 LITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLR 288
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P + TF MGS + G Q+HG+ +KT YE ++ N+ ++MY+ + ++++
Sbjct: 289 PTDLTFV---SVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKV 345
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F ++ +D ++WN+MI + A++VY+ M G+ PD TF +L ++
Sbjct: 346 FESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL 405
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
E+ + + +GL + ++I+ + G+++ A + + + N W A++
Sbjct: 406 ----EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAII 459
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 223/455 (49%), Gaps = 55/455 (12%)
Query: 20 QMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYS 79
Q +S ++P E F SL C L G ++H ++ + L + G + LVR+Y+
Sbjct: 84 QKGISLTEP--EIFASLLETCYSLRAIDHGVRVHH--LIPPYLLRNNLG-ISSKLVRLYA 138
Query: 80 VFGLMDYASNALEGNLNNFDDQSL--NSMINGYVQAGQLEKAQELF-----DTV-PIR-- 129
G + A + ++ D NS+I+GY + GQ E A L+ D V P R
Sbjct: 139 SCGYAEVAHEVFD-RMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFT 197
Query: 130 -NKIAWTC------------------------------MISGYLSAGQVFKACDLFDSMP 158
++ C ++ Y G + KA ++FD +P
Sbjct: 198 FPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP 257
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 218
+D ++W SM++GY+ + L+ EA+ +F M+ +G P + + V GRQ
Sbjct: 258 HKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK---VAISSVLARVLSFKHGRQ 314
Query: 219 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 278
LHG ++ E++L + N+L+ +Y+K G++ + IF M RD +SWN++I S H +
Sbjct: 315 LHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSK 371
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
S L +E M PD +TF+ VL+ CA+ G+V+ G LF+ M YG+ P +HY
Sbjct: 372 NSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYA 431
Query: 339 SIINLLGRAGKVKDAEEFVLR-LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 397
++NL GRAG +++A +++ + +E +WGAL+ C L + D+ A +RL EL+
Sbjct: 432 CMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYL-HGNTDIGEVAAQRLFELE 490
Query: 398 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 432
P N L IY+ R ++ +R+ M +G+
Sbjct: 491 PDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 146/338 (43%), Gaps = 50/338 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+A G YE+A+ L+ QM KP+ TF + AC G+ +G +H L+ G
Sbjct: 166 LISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG 225
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D Y + +LV MY+ G + A N + + + D S NSM+ GY+ G L +A
Sbjct: 226 FGYDVY---VLNALVVMYAKCGDIVKARNVFD-MIPHKDYVSWNSMLTGYLHHGLLHEAL 281
Query: 121 ELF----------DTVP---------------------IRNKIAW-----TCMISGYLSA 144
++F D V IR + W +I Y
Sbjct: 282 DIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKR 341
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
GQ+ +AC +FD M +RD+++W ++IS + +N + + F +M P TF +
Sbjct: 342 GQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVL 398
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYR-IFSNMAYR 261
+ ++ G +L + K Y D +E+ +V++Y + G ++++Y I M
Sbjct: 399 SLCANTGMVEDGERLFSLMSKE-YGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLE 457
Query: 262 -DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDT 298
W +++ HG + + E L PD
Sbjct: 458 AGPTVWGALLYACYLHGNTDIGEVAAQRLFE--LEPDN 493
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 232/499 (46%), Gaps = 49/499 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G GF+E + +F M + +P TF LA + G Q+H I +G
Sbjct: 107 MISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRH---GEQIHGNAICSG 163
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ Y+ + S++ MY G+ DYA + + + D S N +I +G E A
Sbjct: 164 --VSRYNLVVWNSVMDMYRRLGVFDYALSVFL-TMEDRDVVSWNCLILSCSDSGNKEVAL 220
Query: 121 ELF------DTVPIRNKIAWT-------------------CMISGYLSAGQV-------F 148
+ F + P ++ C+ G+LS V F
Sbjct: 221 DQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMF 280
Query: 149 KACD-------LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
C+ LF + DS+ SMI Y + +A+ LF M P TF+
Sbjct: 281 SKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFS 340
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
+ +M +V LD G +H + +K ++ D + SL+ MY K G +D + +F+ +
Sbjct: 341 SVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGK 399
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
D I WN++IMGL+ + RA E+L ++ +L L PD VT +G+L AC +AG V++G ++
Sbjct: 400 DLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQI 459
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
F+SM ++G+ PG +HY II LL R G + +A++ ++P EP+ IW ++ L
Sbjct: 460 FSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPIL-CASLDL 518
Query: 381 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 440
D +A K +LE +P ++ ++ L IY R LR M ++ A G S
Sbjct: 519 GDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSK 578
Query: 441 ILVKGRVHVFSSGDRLEPH 459
I ++ V F + D+L+ H
Sbjct: 579 ISIESSVFSFEA-DQLQIH 596
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 4/215 (1%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N + Y ++G + A +LFD +P +N I W + G G + A DLFD MP+RD +
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVV 102
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
+W +MISG V I +F +M P TF++L + V + G Q+HG
Sbjct: 103 SWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRH---GEQIHGNA 159
Query: 224 VKT-IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 282
+ + + Y+L++ NS++ MY + G D + +F M RD +SWN +I+ SD G A
Sbjct: 160 ICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVA 219
Query: 283 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
L + M E + PD T V++ C+ + KG
Sbjct: 220 LDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 228/445 (51%), Gaps = 8/445 (1%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ G+ +G ++E + LFL++ SD PN +F + ACA L LG +H++L+ G
Sbjct: 127 LVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLG 186
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
L+ + + L+ MY G MD A + ++ D S N+++ + G+LE
Sbjct: 187 --LEKGNVVVGNCLIDMYGKCGFMDDAVLVFQ-HMEEKDTVSWNAIVASCSRNGKLELGL 243
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 180
F +P + + + +I ++ +G A + MP+ +S +W ++++GYV +E E
Sbjct: 244 WFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGE 303
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A F +M + G + +++ A+ ++A + G +H K + +++ ++L+
Sbjct: 304 ATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALID 363
Query: 241 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTV 299
MY+KCG + + +F M ++ I WN MI G + +G + EA+ ++ + E L PD
Sbjct: 364 MYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRF 423
Query: 300 TFLGVLTACAHAGL-VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 358
TFL +L C+H + ++ F M+N Y ++P +H S+I +G+ G+V A++ +
Sbjct: 424 TFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQ 483
Query: 359 RLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG--HVALCNIYAANDR 416
+ W AL+G C ++ D A +++EL + ++ + N+YA ++R
Sbjct: 484 EFGFGYDGVAWRALLGACS-ARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHER 542
Query: 417 HIELTSLRKEMRIKGVRKAPGCSWI 441
E+ +RK MR GV K G SWI
Sbjct: 543 WREVGQIRKIMRESGVLKEVGSSWI 567
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 10/221 (4%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y ++ + A +FD MPD D I+W S++SGYVQ+ E I LF E+ P +F
Sbjct: 100 YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMA 259
A + G +H VK E ++++ N L+ MY KCG +DD+ +F +M
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME 219
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
+D +SWN+++ S +G+ L + M PDTVT+ ++ A +G + ++
Sbjct: 220 EKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQ 275
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
+ + M N P + +I+ + K +A EF ++
Sbjct: 276 VLSDMPN-----PNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 178 IAEAISLFG---------EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIY 228
I A++ FG E++ G P L G+ Y+ RQLHG K +
Sbjct: 27 IVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGF 86
Query: 229 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 288
+ L NSL+ Y ++D++++F M D ISWNS++ G GR E + ++
Sbjct: 87 VSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLE 146
Query: 289 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI---SIINLLG 345
+ ++P+ +F L ACA L G + + +V GL+ G + + +I++ G
Sbjct: 147 LHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK-LGLEKG--NVVVGNCLIDMYG 203
Query: 346 RAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 376
+ G + DA V + E + W A+V C
Sbjct: 204 KCGFMDDA-VLVFQHMEEKDTVSWNAIVASC 233
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 236/482 (48%), Gaps = 49/482 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLG-RQLHAQLIVN 59
+I +A + L LF Q+ SD++P+ T+ LA + SF G R +H IV+
Sbjct: 77 IIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE-SFDTKGLRCIHGIAIVS 135
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
G D G ++V+ YS GL+ AS L ++ + D N MI GY G +K
Sbjct: 136 GLGFDQICGS---AIVKAYSKAGLIVEASK-LFCSIPDPDLALWNVMILGYGCCGFWDKG 191
Query: 120 QELFDTVPIRNK---------------------IAWT------------------CMISG 140
LF+ + R +AW+ +++
Sbjct: 192 INLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNM 251
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y + AC +F+S+ + D +A +S+I+GY + EA+ LF E+ G P
Sbjct: 252 YSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLV 311
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
A++ G+ ++ G+++H ++ E D+ + ++L+ MY+KCG + + +F+ +
Sbjct: 312 AIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE 371
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
++ +S+NS+I+GL HG AS A + +LE GL PD +TF +L C H+GL++KG E+
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 380
F M + +G++P +HY+ ++ L+G AGK+++A EFV+ L + I GAL+ C + +
Sbjct: 432 FERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHE 491
Query: 381 TD--ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
A+V + + + + V L N+YA R E+ LR + K PG
Sbjct: 492 NTHLAEVVAENIHK--NGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGI 549
Query: 439 SW 440
SW
Sbjct: 550 SW 551
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
LFD P+R W S+I Y + +SLF +++ P N T+A L A G
Sbjct: 62 LFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACL--ARGFSES 119
Query: 213 LDQG--RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
D R +HG+ + + +D I +++V Y+K G I ++ ++F ++ D WN MI
Sbjct: 120 FDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMI 179
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
+G G + + ++ M G P+ T + + + GL+D L V+++ L
Sbjct: 180 LGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-----GLIDPSLLLVAWSVHAFCL 234
Query: 331 QPGFDHY----ISIINLLGRAGKVKDA 353
+ D + +++N+ R + A
Sbjct: 235 KINLDSHSYVGCALVNMYSRCMCIASA 261
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 243/496 (48%), Gaps = 52/496 (10%)
Query: 12 EEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLR 71
+EA+ ++ M ++ P+ T S+ A + LS ++ H ++ G ++ + +
Sbjct: 147 KEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNV--FVG 204
Query: 72 RSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR-- 129
+LV MY FG A L+ + D + ++I GY Q G+ +A + F ++ +
Sbjct: 205 SALVDMYVKFGKTREAKLVLD-RVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263
Query: 130 --NKIAW-----------------------------------TCMISGYLSAGQVFKACD 152
N+ + T +++ YL V +
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLR 323
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
+F + + ++WTS+ISG VQN A+ F +MM P + T + ++A
Sbjct: 324 VFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAM 383
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
++GRQ+HG+ K ++ D + L+ +Y KCG D + +F ++ D IS N+MI
Sbjct: 384 FEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYS 443
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 332
+ +G EAL ++E M+ GL P+ VT L VL AC ++ LV++G ELF+S +
Sbjct: 444 YAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLT 503
Query: 333 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 392
DHY +++LLGRAG++++AE + + P+ +W L+ C + + ++A R T++
Sbjct: 504 N-DHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRK-VEMAERITRK 560
Query: 393 LLELDPLNAPGHVALCNIYAAN---DRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHV 449
+LE++P + + + N+YA+ +R IE+ S K+M++K K P SW+ + H
Sbjct: 561 ILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLK---KNPAMSWVEINKETHT 617
Query: 450 FSSGDRL-EPHVEDIL 464
F +GD P+ E IL
Sbjct: 618 FMAGDLFSHPNSEQIL 633
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 118/245 (48%), Gaps = 3/245 (1%)
Query: 131 KIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 190
+I+ + ++ L G + A +FD M +R + W S+I+ +++ EA+ ++ M+
Sbjct: 99 EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMIT 158
Query: 191 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEID 249
+ P T + +F A ++ + ++ HG+ V E ++ + ++LV MY K G+
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 250 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 309
++ + + +D + ++I+G S G +EA+ +++ML + P+ T+ VL +C
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 310 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 369
+ + G + MV S G + S++ + R V D+ V + PN W
Sbjct: 279 NLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLR-VFKCIEYPNQVSW 336
Query: 370 GALVG 374
+L+
Sbjct: 337 TSLIS 341
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G NG E AL+ F +M KPN T S C+ L+ GRQ+H + G
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYG 398
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ D Y G L+ +Y G D A + L+ D SLN+MI Y Q G +A
Sbjct: 399 FDRDKYAG---SGLIDLYGKCGCSDMARLVFD-TLSEVDVISLNTMIYSYAQNGFGREAL 454
Query: 121 ELFDTV------PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTS 167
+LF+ + P N + ++ ++ V + C+LFDS +D I T+
Sbjct: 455 DLFERMINLGLQP--NDVTVLSVLLACNNSRLVEEGCELFDSFR-KDKIMLTN 504
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 207/445 (46%), Gaps = 43/445 (9%)
Query: 2 IGGFAWNGFYEEALLLF-LQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
I G NG +F L S +PN TF++ ACA L GRQLH ++
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ + G +L+ MYS + Y+
Sbjct: 262 FQFETMVGT---ALIDMYS----------------------KCRCWKSAYIVF------T 290
Query: 121 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNE 176
EL DT RN I+W +ISG + GQ A +LF+ + DS W S+ISG+ Q
Sbjct: 291 ELKDT---RNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG 347
Query: 177 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN 236
+ EA F M++ P L A + L G+++HG +K E D+ +
Sbjct: 348 KVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLT 407
Query: 237 SLVSMYAKCGEIDDSYRIFSNM--AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
SL+ MY KCG + RIF +D + WN MI G HG A+ ++E + E +
Sbjct: 408 SLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKV 467
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 354
P TF VL+AC+H G V+KG ++F M YG +P +H +I+LLGR+G++++A+
Sbjct: 468 EPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAK 527
Query: 355 EFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN 414
E + ++ + +L+G C D + A +L EL+P N V L +IYAA
Sbjct: 528 EVIDQMSEPSSSVY-SSLLGSCR-QHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAAL 585
Query: 415 DRHIELTSLRKEMRIKGVRKAPGCS 439
+R ++ S+R+ + K + K PG S
Sbjct: 586 ERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 189/407 (46%), Gaps = 54/407 (13%)
Query: 19 LQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMY 78
L + LS S PN TF L +CA L GR LHAQ++ G+ +D + +LV MY
Sbjct: 21 LDVILSHS-PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTAT---ALVSMY 76
Query: 79 SVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----------DTVPI 128
+ A L+ + S+N+ ++G ++ G A +F ++V +
Sbjct: 77 MKVKQVTDALKVLD-EMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTV 135
Query: 129 RNKI--------------------------AWTCMISGYLSAGQVFKACDLFDSMPDRDS 162
+ + T ++S Y G+ A +F+ +P +
Sbjct: 136 ASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSV 195
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFS---PLNGTFAVLFGAMGSVAYLDQGRQL 219
+ + + ISG ++N ++ S+F M FS P + TF A S+ L GRQL
Sbjct: 196 VTYNAFISGLMENGVMNLVPSVFNLM--RKFSSEEPNDVTFVNAITACASLLNLQYGRQL 253
Query: 220 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDHGR 278
HG+ +K ++++ ++ +L+ MY+KC +Y +F+ + R+ ISWNS+I G+ +G+
Sbjct: 254 HGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
A+ ++E + GL PD+ T+ +++ + G V + ++ F M+ S + P
Sbjct: 314 HETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML-SVVMVPSLKCLT 372
Query: 339 SIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALVGV---CGLS 379
S+++ +K+ +E V++ E + + +L+ + CGLS
Sbjct: 373 SLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLS 419
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 176/320 (55%), Gaps = 5/320 (1%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I Y + + A +FD M +R+ ++W S+++ V+N + F EM+ F P
Sbjct: 154 LIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPD 213
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
T VL A G L G+ +H + E + L +LV MYAK G ++ + +F
Sbjct: 214 ETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFE 271
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVD 315
M ++ +W++MI+GL+ +G A EAL ++ M+ E + P+ VTFLGVL AC+H GLVD
Sbjct: 272 RMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVD 331
Query: 316 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 375
G++ F+ M + ++P HY +++++LGRAG++ +A +F+ ++P EP+ +W L+
Sbjct: 332 DGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
Query: 376 CGLSKTDAD--VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 433
C + + D + + KRL+EL+P + V + N +A E +R+ M+ ++
Sbjct: 392 CSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMK 451
Query: 434 KAPGCSWILVKGRVHVFSSG 453
K G S + + G H F SG
Sbjct: 452 KIAGESCLELGGSFHRFFSG 471
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 8/219 (3%)
Query: 155 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 214
DS P W + GY ++ E+I ++ EM G P TF L A S L
Sbjct: 75 DSTPS----TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLT 130
Query: 215 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 274
GRQ+ +K +++D+ + N+L+ +Y C + D+ ++F M R+ +SWNS++ L
Sbjct: 131 AGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV 190
Query: 275 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 334
++G+ + + M+ PD T + +L+AC G + G +L +S V L+
Sbjct: 191 ENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLG-KLVHSQVMVRELELNC 247
Query: 335 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+++++ ++G ++ A V V+ N W A++
Sbjct: 248 RLGTALVDMYAKSGGLEYA-RLVFERMVDKNVWTWSAMI 285
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 120/304 (39%), Gaps = 44/304 (14%)
Query: 13 EALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRR 72
E++ ++ +M KPN TF L ACA GRQ+ +++ +G+ D Y G
Sbjct: 96 ESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGN--- 152
Query: 73 SLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF--------- 123
+L+ +Y A + + + S NS++ V+ G+L E F
Sbjct: 153 NLIHLYGTCKKTSDARKVFD-EMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC 211
Query: 124 ------------------------DTVPIR----NKIAWTCMISGYLSAGQVFKACDLFD 155
V +R N T ++ Y +G + A +F+
Sbjct: 212 PDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFE 271
Query: 156 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLD 214
M D++ W++MI G Q EA+ LF +MM P TF + A +D
Sbjct: 272 RMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVD 331
Query: 215 QG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMG 272
G + H M+ + +I ++V + + G ++++Y M + D + W +++
Sbjct: 332 DGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
Query: 273 LSDH 276
S H
Sbjct: 392 CSIH 395
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 233/487 (47%), Gaps = 53/487 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI F+ G++ +ALLLF +M D K N T+ S+ +C L G Q+H +
Sbjct: 84 MISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV---- 139
Query: 61 WKLDDYDGRL--RRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEK 118
+ + G L R +L+ +Y+ G M+ A + ++ D S N+MI+GY +
Sbjct: 140 -EKGNCAGNLIVRSALLSLYARCGKMEEARLQFD-SMKERDLVSWNAMIDGYTANACADT 197
Query: 119 AQELFDTV------P--------IRNKIAWTCM-------------------------IS 139
+ LF + P +R I C+ ++
Sbjct: 198 SFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVN 257
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNG 198
Y+ G + A L + RD ++ T++I+G+ Q N ++A +F +M+
Sbjct: 258 AYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEV 317
Query: 199 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIY-EYDLILENSLVSMYAKCGEIDDSYRIFSN 257
+ + ++A + GRQ+HG +K+ +D+ L NSL+ MYAK GEI+D+ F
Sbjct: 318 VVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEE 377
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
M +D SW S+I G HG +A+ +Y M + P+ VTFL +L+AC+H G + G
Sbjct: 378 MKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELG 437
Query: 318 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP--VEPNHAIWGALVGV 375
W+++++M+N +G++ +H II++L R+G +++A + V + + WGA +
Sbjct: 438 WKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDA 497
Query: 376 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG-VRK 434
C + ++ A +LL ++P ++ L ++YAAN + RK M+ G K
Sbjct: 498 CR-RHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNK 556
Query: 435 APGCSWI 441
APG S +
Sbjct: 557 APGYSLV 563
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
NS+ NG+ QL+ +I YL G V A LFD + RD +
Sbjct: 37 NSITNGFCSNLQLKDM-----------------LIDLYLKQGDVKHARKLFDRISKRDVV 79
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
+WT+MIS + + +A+ LF EM T+ + + + L +G Q+HG
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 283
K +LI+ ++L+S+YA+CG+++++ F +M RD +SWN+MI G + + A +
Sbjct: 140 EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSF 199
Query: 284 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 343
++++ ML G PD TF +L A +V K E+ S ++ ++ GF ++I
Sbjct: 200 SLFQLMLTEGKKPDCFTFGSLL----RASIVVKCLEIV-SELHGLAIKLGFGRSSALIRS 254
Query: 344 LGRA 347
L A
Sbjct: 255 LVNA 258
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 206 AMGSVAYLDQGRQL---HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 262
A+ +Y + +QL HG + + +L L++ L+ +Y K G++ + ++F ++ RD
Sbjct: 18 ALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRD 77
Query: 263 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
+SW +MI S G +AL +++ M + + T+ VL +C G + +G ++
Sbjct: 78 VVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG 137
Query: 323 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 354
S V ++++L R GK+++A
Sbjct: 138 S-VEKGNCAGNLIVRSALLSLYARCGKMEEAR 168
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 215/460 (46%), Gaps = 44/460 (9%)
Query: 20 QMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYS 79
++ +D + +F+ L C + G QLH ++ G + + SLV Y
Sbjct: 132 RILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPST---SLVHFYG 188
Query: 80 VFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA-------------------- 119
GL+ A E L+ D N++++ YV G +++A
Sbjct: 189 KCGLIVEARRVFEAVLDR-DLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFT 247
Query: 120 -QELFDTVPIRN---------KIAW-------TCMISGYLSAGQVFKACDLFDSMPDRDS 162
L I K+++ T +++ Y + + A + F+SM R+
Sbjct: 248 FSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNV 307
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
++W +MI G+ QN EA+ LFG+M+ P TFA + + + + + +Q+ M
Sbjct: 308 VSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAM 367
Query: 223 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 282
K L + NSL+S Y++ G + ++ F ++ D +SW S+I L+ HG A E+
Sbjct: 368 VTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEES 427
Query: 283 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 342
L ++E+ML+ L PD +TFL VL+AC+H GLV +G F M Y ++ +HY +I+
Sbjct: 428 LQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLID 486
Query: 343 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAP 402
LLGRAG + +A + + +P EP+ A G C + + + A K+LLE++P
Sbjct: 487 LLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGA-KKLLEIEPTKPV 545
Query: 403 GHVALCNIYAANDRHIELTSLRKEMRIKGVR-KAPGCSWI 441
+ L N Y + + LRK R K PGCSW+
Sbjct: 546 NYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 18/261 (6%)
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ----- 174
Q +++++ ++NK ++ Y + A LFD MP R+ + W +I G +Q
Sbjct: 65 QGIYNSLFLQNK-----LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDT 119
Query: 175 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 234
N ++ S + +F L + G QLH + VK E
Sbjct: 120 NHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFP 179
Query: 235 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM--LEF 292
SLV Y KCG I ++ R+F + RD + WN+++ +G EA + + M +
Sbjct: 180 STSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKN 239
Query: 293 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 352
D TF +L+AC +++G ++ ++++ Q +++N+ ++ + D
Sbjct: 240 RFRGDYFTFSSLLSACR----IEQGKQI-HAILFKVSYQFDIPVATALLNMYAKSNHLSD 294
Query: 353 AEEFVLRLPVEPNHAIWGALV 373
A E + V N W A++
Sbjct: 295 ARECFESMVVR-NVVSWNAMI 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 267
S+ +L +Q HG VK L L+N L+ Y K E DD+ ++F M R+ ++WN
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 268 SMIMGL------SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
+I G+ ++H RA +L + D V+F+G++ C + + G +L
Sbjct: 107 ILIHGVIQRDGDTNH-RAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLH 165
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
MV GL+ S+++ G+ G + +A V ++ + +W ALV
Sbjct: 166 CLMVKQ-GLESSCFPSTSLVHFYGKCGLIVEARR-VFEAVLDRDLVLWNALVS 216
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 186/349 (53%), Gaps = 22/349 (6%)
Query: 109 GYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSM 168
G + G ++K L+++ ++ T ++ Y G + A +FD MP+R S+ W +M
Sbjct: 130 GRIVHGMVKKLGFLYES-----ELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAM 184
Query: 169 ISGYVQ-----NELIAEAISLFGEM--MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
I GY N +A+ LF G P + T + A+ L+ G +HG
Sbjct: 185 IGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHG 244
Query: 222 MQVKTIY--EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 279
K + E D+ + +LV MY+KCG +++++ +F M ++ +W SM GL+ +GR
Sbjct: 245 YIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRG 304
Query: 280 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 339
+E + M E G+ P+ +TF +L+A H GLV++G ELF SM +G+ P +HY
Sbjct: 305 NETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGC 364
Query: 340 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 399
I++LLG+AG++++A +F+L +P++P+ + +L C + + + K LLE++
Sbjct: 365 IVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIY-GETVMGEEIGKALLEIERE 423
Query: 400 N-------APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
+ +VAL N+ A + +E+ LRKEM+ + ++ PG S++
Sbjct: 424 DEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 176/313 (56%), Gaps = 7/313 (2%)
Query: 130 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELI---AEAISLFG 186
++ ++ Y + G++ +A LF+ + + D W ++++ Y +E I E + LF
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFM 208
Query: 187 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
M P + L + ++ +G H +K + + SL+ +Y+KCG
Sbjct: 209 RMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCG 265
Query: 247 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 306
+ + ++F M+ RD +N+MI GL+ HG E + +Y++++ GL PD+ TF+ ++
Sbjct: 266 CLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTIS 325
Query: 307 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 366
AC+H+GLVD+G ++FNSM YG++P +HY +++LLGR+G++++AEE + ++PV+PN
Sbjct: 326 ACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNA 385
Query: 367 AIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKE 426
+W + +G + D + A K LL L+ N+ +V L NIYA +R ++ R+
Sbjct: 386 TLWRSFLG-SSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTREL 444
Query: 427 MRIKGVRKAPGCS 439
M+ V K+PG S
Sbjct: 445 MKDHRVNKSPGIS 457
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 150 ACDLFDSMPDRDSIAWTSMISGYVQNELIAE---AISLFGEMMA---HGFSPLNGTFAVL 203
A + +P+ + ++IS V N + A SL+ ++++ + P T+ L
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 204 FGAMG-SVAYLDQGRQLHGMQVKTI--YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
F A G + GR LH +K + +D ++ +LV YA CG++ ++ +F +
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
D +WN+++ ++ V + + P+ ++ + ++ +CA+ G +G
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRG 235
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 235/499 (47%), Gaps = 40/499 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLH------- 53
MI + F E+AL F +M S +PN T S+ +C + G+ +H
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE 333
Query: 54 ------------AQLIVNGWKLDDYDGRLR----------RSLVRMYSVFGLMDYASNAL 91
+L KL D + LR SL+ +Y+ G++ A
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLF 393
Query: 92 EGNLNNF---DDQSLNSMINGYVQAGQLEKAQELFDTV---PIRNKIAWTCMISGYLSAG 145
+ D +L S I+ AG + +++ V + ++ +I Y +G
Sbjct: 394 RQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSG 453
Query: 146 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLF 204
V A +F+ + R + W SM+ G+ QN EAISLF + M H + +N TF +
Sbjct: 454 SVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF-DYMYHSYLEMNEVTFLAVI 512
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
A S+ L++G+ +H + + + DL + +L+ MYAKCG+++ + +F M+ R +
Sbjct: 513 QACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
SW+SMI HGR A++ + M+E G P+ V F+ VL+AC H+G V++G FN M
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM 631
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 384
S+G+ P +H+ I+LL R+G +K+A + +P + ++WG+LV C + + D
Sbjct: 632 -KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQ-KMD 689
Query: 385 VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK 444
+ L ++ + + L NIYA E LR M+ ++K PG S I +
Sbjct: 690 IIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEID 749
Query: 445 GRVHVFSSGDRLEPHVEDI 463
+V F +G+ ++I
Sbjct: 750 QKVFRFGAGEENRIQTDEI 768
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 128/242 (52%), Gaps = 3/242 (1%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
T ++ Y G + A +FD MP RD +AW++++S ++N + +A+ +F M+ G
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P T + + L R +HG + +++ D L NSL++MY+KCG++ S RI
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F +A ++ +SW +MI + + +AL + M++ G+ P+ VT VL++C GL+
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319
Query: 315 DKGWELFNSMVNSYGLQPGFDHY-ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+G + V L P ++ ++++ L GK+ D E VLR+ + N W +L+
Sbjct: 320 REGKSVHGFAVRR-ELDPNYESLSLALVELYAECGKLSDCET-VLRVVSDRNIVAWNSLI 377
Query: 374 GV 375
+
Sbjct: 378 SL 379
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 121/257 (47%), Gaps = 25/257 (9%)
Query: 129 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 188
R+ + T +I Y G + +F++ P DS + +I V L+ AI L+ +
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 189 MAHGFSPLNGTF-AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 247
++ F +VL GS +L G ++HG +K + D ++E SL+ MY + G
Sbjct: 92 VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGN 151
Query: 248 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 307
+ D+ ++F M RD ++W++++ ++G +AL +++ M++ G+ PD VT + V+
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 308 CA-----------HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 356
CA H + K ++L ++ N S++ + + G + +E
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCN------------SLLTMYSKCGDLLSSERI 259
Query: 357 VLRLPVEPNHAIWGALV 373
++ + N W A++
Sbjct: 260 FEKIA-KKNAVSWTAMI 275
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 218/473 (46%), Gaps = 35/473 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYA-------------CAGL---- 43
MIG ++ +G EEA+ +F M + + + T I+L A C +
Sbjct: 223 MIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDIS 282
Query: 44 -------SFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLN 96
++ G + A+ + K D G S+V Y+ G MD A
Sbjct: 283 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGL--TSIVSCYAEKGDMDIAVVYFSKTRQ 340
Query: 97 ---NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACD- 152
D +L +++G ++ ++ L T +++G ++ F +
Sbjct: 341 LCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVET 400
Query: 153 ---LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMG 208
LF+ + + I+W S+ISG VQ+ + A +F +MM G P T A L
Sbjct: 401 VLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 460
Query: 209 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 268
+ L+ G++LHG ++ +E + + +L+ MYAKCG + +F ++ +WNS
Sbjct: 461 QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNS 520
Query: 269 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 328
MI G S G AL+ Y M E GL PD +TFLGVL+AC H G VD+G F +M+ +
Sbjct: 521 MISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEF 580
Query: 329 GLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASR 388
G+ P HY ++ LLGRA +A + ++ ++P+ A+WGAL+ C + + + +V
Sbjct: 581 GISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHR-ELEVGEY 639
Query: 389 ATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
+++ LD N +V + N+YA ++ +R M+ G G S I
Sbjct: 640 VARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 24/329 (7%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
T +++ YL G V A LFD MP+RD++ W ++I GY +N +A LF M+ GFS
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
P T L G ++ QGR +HG+ K+ E D ++N+L+S Y+KC E+ + +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F M + +SWN+MI S G EA+TV++ M E + VT + +L+ AH
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS--AHV--- 263
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
E + +V G+ S++ R G + AE L + + + +
Sbjct: 264 --SHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAER--LYASAKQDSIVGLTSIV 319
Query: 375 VCGLSKTDADVA----SRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIK 430
C K D D+A S+ + +++D + G + C HI++ M +
Sbjct: 320 SCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK----KSSHIDIG-----MSLH 370
Query: 431 GVRKAPG-CSWIL-VKGRVHVFSSGDRLE 457
G G C+ L V G + ++S D +E
Sbjct: 371 GYAIKSGLCTKTLVVNGLITMYSKFDDVE 399
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 191/454 (42%), Gaps = 59/454 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G++ NG+ +A LF+ M P+ T ++L C F GR +H +G
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+LD +++ +L+ YS + A L + + S N+MI Y Q+G E+A
Sbjct: 182 LELDS---QVKNALISFYSKCAELGSA-EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAI 237
Query: 121 ELFDT----------VPIRNKIAW-----------------------TCMISGYLSAGQV 147
+F V I N ++ T ++ Y G +
Sbjct: 238 TVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCL 297
Query: 148 FKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM----MAHGFSPLNGTFAVL 203
A L+ S + TS++S Y + + A+ F + M L G +L
Sbjct: 298 VSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVG---IL 354
Query: 204 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 263
G S +++D G LHG +K+ ++ N L++MY+K +++ +F +
Sbjct: 355 HGCKKS-SHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPL 413
Query: 264 ISWNSMIMGLSDHGRASEALTVY-ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
ISWNS+I G GRAS A V+ + ML GL PD +T +L C+ ++ G EL
Sbjct: 414 ISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKEL-- 471
Query: 323 SMVNSYGLQPGFDH----YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GV 375
+ Y L+ F++ ++I++ + G AE V + P A W +++ +
Sbjct: 472 ---HGYTLRNNFENENFVCTALIDMYAKCGNEVQAES-VFKSIKAPCTATWNSMISGYSL 527
Query: 376 CGLSKTDADVASRATKRLLELDPLNAPGHVALCN 409
GL ++ L+ D + G ++ CN
Sbjct: 528 SGLQHRALSCYLEMREKGLKPDEITFLGVLSACN 561
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 121/269 (44%), Gaps = 13/269 (4%)
Query: 160 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV--AYLDQGR 217
RD + S++ + E+ + I++F +++ +P + T ++ A + ++ Q
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 277
Q+ K+ + + ++ SL+++Y K G + + +F M RD + WN++I G S +G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 278 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 337
+A ++ ML+ G P T + +L C G V +G + S GL+
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS-GLELDSQVK 189
Query: 338 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV---CGLSKTDADVASRATKRLL 394
++I+ + ++ A E + R + + W ++G GL + V ++ +
Sbjct: 190 NALISFYSKCAELGSA-EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 395 ELDPLNAPGHVALCNIYAANDRHIELTSL 423
E+ P V + N+ +A+ H L L
Sbjct: 249 EISP------VTIINLLSAHVSHEPLHCL 271
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 180/368 (48%), Gaps = 39/368 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLS-DSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
MI + N EALLLF+ M +S S+ + TF + AC S LG Q+H I
Sbjct: 89 MIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKA 148
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSL-NSMINGYVQAGQLEK 118
G+ F+D N++++ Y + G+ +
Sbjct: 149 GF------------------------------------FNDVFFQNTLMDLYFKCGKPDS 172
Query: 119 AQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELI 178
+++FD +P R+ ++WT M+ G +S Q+ A +F+ MP R+ ++WT+MI+ YV+N
Sbjct: 173 GRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRP 232
Query: 179 AEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSL 238
EA LF M P T L A + L GR +H K + D L +L
Sbjct: 233 DEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTAL 292
Query: 239 VSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPD 297
+ MY+KCG + D+ ++F M + +WNSMI L HG EAL+++E M E + PD
Sbjct: 293 IDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPD 352
Query: 298 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 357
+TF+GVL+ACA+ G V G F M+ YG+ P +H +I LL +A +V+ A V
Sbjct: 353 AITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLV 412
Query: 358 LRLPVEPN 365
+ +P+
Sbjct: 413 ESMDSDPD 420
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+IS S G+ A +F+ + + W MI N EA+ LF MM S
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 197 NG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 255
+ TF + A + + + G Q+HG+ +K + D+ +N+L+ +Y KCG+ D ++F
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 256 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 315
M R +SW +M+ GL + + A V+ M + V++ ++TA D
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQM----PMRNVVSWTAMITAYVKNRRPD 233
Query: 316 KGWELFNSMVNSYGLQPGFDHYISIINLL 344
+ ++LF M ++P + +I+NLL
Sbjct: 234 EAFQLFRRM-QVDDVKP---NEFTIVNLL 258
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 238/498 (47%), Gaps = 53/498 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ GF N +EA+ FL+M +PN T+ ++ C+ + G+Q+H+Q I G
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVG 355
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA- 119
++ D D + +LV MY + ++ + G + + + S ++I G V G ++
Sbjct: 356 FE-DSTD--VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCF 412
Query: 120 --------QELFDTVPIRNKIAWTC------------------------------MISGY 141
+E+ V + + C ++ Y
Sbjct: 413 GLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAY 472
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE--AISLFGEMMAHGFSPLNGT 199
S+ +V A ++ SM RD+I +TS+++ + NEL A+S+ M G +
Sbjct: 473 ASSRKVDYAWNVIRSMKRRDNITYTSLVTRF--NELGKHEMALSVINYMYGDGIRMDQLS 530
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
A ++ L+ G+ LH VK+ + + NSLV MY+KCG ++D+ ++F +A
Sbjct: 531 LPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA 590
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
D +SWN ++ GL+ +G S AL+ +E M PD+VTFL +L+AC++ L D G E
Sbjct: 591 TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE 650
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC--- 376
F M Y ++P +HY+ ++ +LGRAG++++A V + ++PN I+ L+ C
Sbjct: 651 YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYR 710
Query: 377 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 436
G D+A++ L L P + ++ L ++Y + + R M K + K
Sbjct: 711 GNLSLGEDMANKG----LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKL 766
Query: 437 GCSWILVKGRVHVFSSGD 454
G S + V+G+VH F S D
Sbjct: 767 GKSTVEVQGKVHSFVSED 784
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 179/400 (44%), Gaps = 58/400 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI F + + AL LF +M S + PN TF S+ +CAGL G ++H +I G
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTG 154
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQ----- 115
++ + G SL +YS G A L +L N D S MI+ V A +
Sbjct: 155 FEGNSVVGS---SLSDLYSKCGQFKEACE-LFSSLQNADTISWTMMISSLVGARKWREAL 210
Query: 116 -----------------------------LEKAQELFDTVPIR----NKIAWTCMISGYL 142
LE + + + +R N + T ++ Y
Sbjct: 211 QFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYS 270
Query: 143 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
++ A + +S ++D WTS++SG+V+N EA+ F EM + G P N T++
Sbjct: 271 QFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSA 330
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID-DSYRIFSNMAYR 261
+ +V LD G+Q+H +K +E + N+LV MY KC + ++ R+F M
Sbjct: 331 ILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP 390
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-----------H 310
+ +SW ++I+GL DHG + + M++ + P+ VT GVL AC+ H
Sbjct: 391 NVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIH 450
Query: 311 AGL----VDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 346
A L VD + NS+V++Y D+ ++I + R
Sbjct: 451 AYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKR 490
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 34/273 (12%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
++S YL ++ A LFD M R AWT MIS + +++ A A+SLF EMMA G P
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
TF+ + + + + G ++HG +KT +E + ++ +SL +Y+KCG+ ++ +FS
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS 183
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA------- 309
++ D ISW MI L + EAL Y M++ G+ P+ TF+ +L A +
Sbjct: 184 SLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFG 243
Query: 310 ---HAGLVDKGWEL--------------FNSM------VNSYGLQPGFDHYISIINLLGR 346
H+ ++ +G L F+ M +NS G Q F + S+++ R
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVF-LWTSVVSGFVR 302
Query: 347 AGKVKDAEEFVLR---LPVEPNHAIWGALVGVC 376
+ K+A L L ++PN+ + A++ +C
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 23/152 (15%)
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 275
G +H +K +L L N+L+S+Y K I ++ ++F M++R +W MI +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-----------HAGLVDKGWELFNSM 324
+ AL+++E M+ G +P+ TF V+ +CA H ++ G+E NS+
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE-GNSV 160
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 356
V S S+ +L + G+ K+A E
Sbjct: 161 VGS-----------SLSDLYSKCGQFKEACEL 181
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 228/481 (47%), Gaps = 56/481 (11%)
Query: 8 NGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYD 67
+G + L LFLQ+ + + TF + AC+ LS+P GRQ+HA +I G +
Sbjct: 62 SGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS 121
Query: 68 GRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQ------------ 115
+ +L+ MYS +G + + E ++ D S N++++G+++ G+
Sbjct: 122 ---KTALIDMYSKYGHLVDSVRVFE-SVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMY 177
Query: 116 -----------------------LEKAQELFDTVPIRNK---IAWTCMISGYLSAGQVFK 149
L++ +++ V + + + T MIS Y S G + +
Sbjct: 178 RERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINE 237
Query: 150 ACDLFDSMP-DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMG 208
A +++S+ D + S+ISG ++N EA L P +
Sbjct: 238 AMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCS 292
Query: 209 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 268
+ L G+Q+H + ++ + D L N L+ MY KCG+I + IF + + +SW S
Sbjct: 293 DNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTS 352
Query: 269 MIMGLSDHGRASEALTVYETMLE--FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
MI + +G +AL ++ M E G+ P++VTFL V++ACAHAGLV +G E F M
Sbjct: 353 MIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKE 412
Query: 327 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH----AIWGALVGVCGLSKTD 382
Y L PG +HY+ I++L +AG+ ++ V R+ N AIW A++ C L+ D
Sbjct: 413 KYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLN-MD 471
Query: 383 ADVASRATKRLL-ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
+RL+ E P NA +V + N YAA + + LR +++ KG+ K G S
Sbjct: 472 LTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSLF 531
Query: 442 L 442
+
Sbjct: 532 I 532
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 115/229 (50%), Gaps = 12/229 (5%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP--LNGTFAVLFGAMGSV 210
LFD +P RD + S +S ++++ + ++LF + H SP + TF + GA +
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQIHRASPDLSSHTFTPVLGACSLL 97
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
+Y + GRQ+H + +K E I + +L+ MY+K G + DS R+F ++ +D +SWN+++
Sbjct: 98 SYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALL 157
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
G +G+ EAL V+ M + T V+ CA ++ +G + V++ +
Sbjct: 158 SGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQ-----VHAMVV 212
Query: 331 QPGFDHYI---SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 376
G D + ++I+ G + +A + L V + + +L+ C
Sbjct: 213 VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 207/434 (47%), Gaps = 46/434 (10%)
Query: 74 LVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF---------- 123
++ Y FG++D A N+ + + N+++ G+ + G KA +LF
Sbjct: 357 MITAYMSFGMVDSAVEIF-ANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVEL 415
Query: 124 ---------DTVPIRNKIAWTCMISGY-LSAGQVFKAC-------------------DLF 154
D + ++ + I G+ + G F C ++F
Sbjct: 416 TDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF 475
Query: 155 DSMPDR--DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVA 211
D P S A TS+I GY +N L +A+SLF + L+ + ++ G++
Sbjct: 476 DQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLG 535
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 271
+ + G Q+H +K Y D+ L NSL+SMYAKC + DD+ +IF+ M D ISWNS+I
Sbjct: 536 FREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLIS 595
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH--AGLVDKGWELFNSMVNSYG 329
EAL ++ M E + PD +T V++A + + + +LF SM Y
Sbjct: 596 CYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYD 655
Query: 330 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRA 389
++P +HY + + +LG G +++AE+ + +PV+P ++ AL+ C + ++ VA R
Sbjct: 656 IEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRI-HSNTSVAKRV 714
Query: 390 TKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHV 449
K +L P ++ NIY+A+ +R+EMR +G RK P SWI+ + ++H
Sbjct: 715 AKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHS 774
Query: 450 FSSGDRLEPHVEDI 463
F + D P +DI
Sbjct: 775 FHARDTSHPQEKDI 788
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 147/291 (50%), Gaps = 16/291 (5%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N++I Y + ++K + L++ + ++ + +T MI+ Y+S G V A ++F ++ ++++I
Sbjct: 324 NALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTI 383
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
+ ++++G+ +N +A+ LF +M+ G + + A G V+ Q+HG
Sbjct: 384 TYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFC 443
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIF----SNMAYRDKISWNSMIMGLSDHGRA 279
+K ++ ++ +L+ M +C + D+ +F SN+ + S+I G + +G
Sbjct: 444 IKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATT--SIIGGYARNGLP 501
Query: 280 SEALTVY-ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
+A++++ T+ E L+ D V+ +L C G + G++ ++ Y L+ G+ I
Sbjct: 502 DKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ-----IHCYALKAGYFSDI 556
Query: 339 SIIN-LLGRAGKVKDAEEFVLRLPVEPNHAI--WGALVGVCGLSKTDADVA 386
S+ N L+ K D+++ + H + W +L+ C + + + D A
Sbjct: 557 SLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLIS-CYILQRNGDEA 606
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF-SP 195
+IS YL G +A +F S+ +++T++ISG+ + L EA+ +F M G P
Sbjct: 120 LISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 196 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK--CGEIDDSYR 253
TF + A V+ G Q+HG+ VK+ + + + NSL+S+Y K DD +
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK 239
Query: 254 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAG 312
+F + RD SWN+++ L G++ +A ++ M G D+ T +L++C +
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 313 LVDKGWEL 320
++ +G EL
Sbjct: 300 VLLRGREL 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 165/372 (44%), Gaps = 54/372 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSD-SKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
+I GF+ EAL +F +M + +PN TF+++ AC +S LG Q+H ++ +
Sbjct: 151 LISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKS 210
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
G+ + SVF SN+L ++ +D S +
Sbjct: 211 GF---------------LNSVF-----VSNSL---MSLYDKDS----------GSSCDDV 237
Query: 120 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR------DSIAWTSMISGYV 173
+LFD +P R+ +W ++S + G+ KA DLF M +R DS ++++S
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM-NRVEGFGVDSFTLSTLLSSCT 296
Query: 174 QNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI 233
+ ++ L G + G L G + + L+ M + D +
Sbjct: 297 DSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ----DAV 352
Query: 234 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 293
+++ Y G +D + IF+N+ ++ I++N+++ G +G +AL ++ ML+ G
Sbjct: 353 TFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRG 412
Query: 294 LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG--FDHYI--SIINLLGRAGK 349
+ + + AC GLV + + + ++ + ++ G F+ I +++++ R +
Sbjct: 413 VELTDFSLTSAVDAC---GLVSE--KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCER 467
Query: 350 VKDAEEFVLRLP 361
+ DAEE + P
Sbjct: 468 MADAEEMFDQWP 479
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 110/243 (45%), Gaps = 13/243 (5%)
Query: 150 ACD----LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVLF 204
+CD LFD +P RD +W +++S V+ +A LF EM GF + T + L
Sbjct: 233 SCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLL 292
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 264
+ + L +GR+LHG ++ +L + N+L+ Y+K ++ ++ M +D +
Sbjct: 293 SSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAV 352
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
++ MI G A+ ++ + E +T+T+ ++ G K +LF M
Sbjct: 353 TFTEMITAYMSFGMVDSAVEIFANVTE----KNTITYNALMAGFCRNGHGLKALKLFTDM 408
Query: 325 VNSYGLQPGFDHYISIINLLGRAGKVKDAEE---FVLRLPVEPNHAIWGALVGVCGLSKT 381
+ G++ S ++ G + K +E+ F ++ N I AL+ +C +
Sbjct: 409 LQR-GVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCER 467
Query: 382 DAD 384
AD
Sbjct: 468 MAD 470
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 205/456 (44%), Gaps = 51/456 (11%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
MI G++ + E A +F Q+ + +FI+ +C+ +G LH + +G
Sbjct: 96 MIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSG 155
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+ + LR +L+ Y V G + A + + D + ++++NGY+Q + A
Sbjct: 156 FMVFT---DLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALAL 212
Query: 121 ELFD-------TVPIRNKIAW--------------------------------TCMISGY 141
+LF V + +++ T +I Y
Sbjct: 213 DLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMY 272
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G + A +FD +D + W MI Y + L+ E + L +M P + TF
Sbjct: 273 GKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFV 332
Query: 202 VLFGAMGSVAYLDQ---GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 258
G + S AY + GR + + + D IL +LV MYAK G ++ + IF+ M
Sbjct: 333 ---GLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Query: 259 AYRDKISWNSMIMGLSDHGRASEALTVYETMLE--FGLYPDTVTFLGVLTACAHAGLVDK 316
+D SW +MI G HG A EA+T++ M E + P+ +TFL VL AC+H GLV +
Sbjct: 390 KDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVME 449
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 376
G F MV +Y P +HY +++LLGRAG++++A E + LP+ + W AL+ C
Sbjct: 450 GIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAAC 509
Query: 377 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYA 412
+ +AD+ RL E+ + + L +A
Sbjct: 510 RVYG-NADLGESVMMRLAEMGETHPADAILLAGTHA 544
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 15/292 (5%)
Query: 83 LMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYL 142
L+ L +L + D S I+GY+ L+K D + +A++ ++
Sbjct: 23 LLSPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDK-----DDFAVSKLLAFSSVL---- 73
Query: 143 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 202
+ A +F+ + + + + +MI GY ++ A S+F ++ A G + +F
Sbjct: 74 ---DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFIT 130
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR- 261
+ + G LHG+ +++ + L N+L+ Y CG+I D+ ++F M
Sbjct: 131 TLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSV 190
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
D +++++++ G + + AL ++ M + + + T L L+A + G + G E
Sbjct: 191 DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS-GAESA 249
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ + GL ++I + G+ G + A + + + W ++
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYGKTGGISSARR-IFDCAIRKDVVTWNCMI 300
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 224/486 (46%), Gaps = 52/486 (10%)
Query: 15 LLLFLQMT-LSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRS 73
L LF +M + ++P+ T S+ AC + +GR +H I G+ L D + S
Sbjct: 210 LKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV--FVCNS 267
Query: 74 LVRMYSVFGLMDYASNAL-EGNLNNFDDQSLNSMINGYVQAGQLEKAQELF--------- 123
L+ MYS +D A E N S NS++ G+V + ++A E+F
Sbjct: 268 LIDMYSKGFDVDSAFRVFDETTCRNI--VSWNSILAGFVHNQRYDEALEMFHLMVQEAVE 325
Query: 124 -DTVPI-----------------------------RNKIAWTCMISGYLSAGQVFKACDL 153
D V + N++A + +I Y S V A +
Sbjct: 326 VDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTV 385
Query: 154 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
DSM +D ++ ++MISG EAIS+F M +P T L A A L
Sbjct: 386 LDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADL 442
Query: 214 DQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
+ HG+ ++ ++ D+ + S+V YAKCG I+ + R F + ++ ISW +I
Sbjct: 443 RTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISA 502
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 332
+ +G +AL +++ M + G P+ VT+L L+AC H GLV KG +F SMV +P
Sbjct: 503 YAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKP 561
Query: 333 GFDHYISIINLLGRAGKVKDAEEFVLRLP--VEPNHAIWGALVGVCGLSKTDADVASRAT 390
HY I+++L RAG++ A E + LP V+ + WGA++ C + S
Sbjct: 562 SLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVV 621
Query: 391 KRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVF 450
+LEL+PL + G++ + +AA ++ +R+ ++ + VR G S + F
Sbjct: 622 AEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRF 681
Query: 451 SSGDRL 456
+GD+L
Sbjct: 682 LAGDKL 687
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVA 211
LFD M +RD I+W+ +I YVQ++ + LF EM+ + P T + A +
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 212 YLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
+D GR +HG ++ ++ D+ + NSL+ MY+K ++D ++R+F R+ +SWNS++
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-----------HAGLVDKGWE 319
G + R EAL ++ M++ + D VT + +L C H ++ +G+E
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 353
N L D Y S +L+ AG V D+
Sbjct: 361 -----SNEVALSSLIDAYTS-CSLVDDAGTVLDS 388
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 153/352 (43%), Gaps = 52/352 (14%)
Query: 9 GFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDG 68
GF EE L F ++ + +PN T + + +AC L F G ++H +I +G+
Sbjct: 106 GFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFC---GIS 160
Query: 69 RLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI 128
++ S++ MY+ + ++ L ++ D S + +I YVQ+ + +LF +
Sbjct: 161 SVQNSILCMYADSDSL--SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVH 218
Query: 129 RNKIAWTCM-ISGYLSAGQVFKACD----------------------------------- 152
K C+ ++ L A V + D
Sbjct: 219 EAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDV 278
Query: 153 -----LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 207
+FD R+ ++W S+++G+V N+ EA+ +F M+ T L
Sbjct: 279 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 267
+ +HG+ ++ YE + + +SL+ Y C +DD+ + +M Y+D +S +
Sbjct: 339 KFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCS 398
Query: 268 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-HAGLVDKGW 318
+MI GL+ GR+ EA++++ M + P+ +T + +L AC+ A L W
Sbjct: 399 TMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKW 447
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 135/312 (43%), Gaps = 44/312 (14%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ GF N Y+EAL +F M + + T +SL C P + +H +I G
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
++ ++ SL+ Y+ L+D A L+ ++ D S ++MI+G AG+ ++A
Sbjct: 359 YESNEV---ALSSLIDAYTSCSLVDDAGTVLD-SMTYKDVVSCSTMISGLAHAGRSDEAI 414
Query: 121 ELF----DT---------------------------VPIRNKIAW------TCMISGYLS 143
+F DT + IR +A T ++ Y
Sbjct: 415 SIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAK 474
Query: 144 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 203
G + A FD + +++ I+WT +IS Y N L +A++LF EM G++P T+
Sbjct: 475 CGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAA 534
Query: 204 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 263
A + +G + V+ ++ L + +V M ++ GEID + + N+ K
Sbjct: 535 LSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVK 594
Query: 264 I---SWNSMIMG 272
+W +++ G
Sbjct: 595 AGASAWGAILSG 606
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 9/196 (4%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
Y+ G + FD M RDS++W ++ G + E + F ++ GF P T
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
++ A S+ + G ++HG +++ + ++NS++ MYA + + ++F M+
Sbjct: 131 VLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSE 187
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
RD ISW+ +I L +++ M+ E PD VT VL AC +D G
Sbjct: 188 RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVG-- 245
Query: 320 LFNSMVNSYGLQPGFD 335
V+ + ++ GFD
Sbjct: 246 ---RSVHGFSIRRGFD 258
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 24/132 (18%)
Query: 180 EAISLFGEMMAHGFS---PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN 236
E +S + E+ G P F ++F A +++L QG N
Sbjct: 27 EVVSGYSEIQRAGVQFNDPF--VFPIVFKACAKLSWLFQG-------------------N 65
Query: 237 SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 296
S+ Y KCG++ R F M RD +SWN ++ GL D+G E L + + +G P
Sbjct: 66 SIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEP 125
Query: 297 DTVTFLGVLTAC 308
+T T + V+ AC
Sbjct: 126 NTSTLVLVIHAC 137
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 214/483 (44%), Gaps = 47/483 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGL-SFPYLGRQLHAQLIVN 59
+I +G EA+ L +M P E SL C + S + R HA ++V+
Sbjct: 119 IINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVD 178
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
+ L +LV MY F A + + + ++ S +MI+G V E
Sbjct: 179 ERMQESV--LLSTALVDMYLKFDDHAAAFHVFD-QMEVKNEVSWTAMISGCVANQNYEMG 235
Query: 120 QELFDTVPIRN---------KIAWTCM-------------------------------IS 139
+LF + N + C+ ++
Sbjct: 236 VDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMT 295
Query: 140 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 199
Y G V + LF++ RD + W+SMISGY + +E ++L +M G + T
Sbjct: 296 MYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVT 355
Query: 200 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
+ A + L +H +K + ++L N+L+ MYAKCG + + +F +
Sbjct: 356 LLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT 415
Query: 260 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 319
+D +SW+SMI HG SEAL +++ M++ G D + FL +L+AC HAGLV++
Sbjct: 416 EKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQT 475
Query: 320 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
+F + Y + +HY INLLGR GK+ DA E + +P++P+ IW +L+ C +
Sbjct: 476 IF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACE-T 533
Query: 380 KTDADVASR-ATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
DVA + L++ +P N +V L I+ + + +R+ M+ + + K G
Sbjct: 534 HGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGF 593
Query: 439 SWI 441
S I
Sbjct: 594 SKI 596
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP- 195
+IS Y + + +FD M RD++++ S+I+ Q+ L+ EA+ L EM +GF P
Sbjct: 88 LISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPK 147
Query: 196 --LNGTFAVLFGAMGSVAYLDQGRQLHGMQ-VKTIYEYDLILENSLVSMYAKCGEIDDSY 252
L + L MGS + + R H + V + ++L +LV MY K + ++
Sbjct: 148 SELVASLLALCTRMGSSSKV--ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 253 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 308
+F M ++++SW +MI G + + ++ M L P+ VT L VL AC
Sbjct: 206 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 156 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
++ R ++ + + G V ++ EA+ L+ ++ H NG A+L + + A+ +
Sbjct: 4 ALSSRLNLELGNKLKGLVSDQFYDEALRLY-KLKIHSLGT-NGFTAILPSVIKACAFQQE 61
Query: 216 ----GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 271
G QLH + +K + D ++ NSL+SMYAK ++F M +RD +S+ S+I
Sbjct: 62 PFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIIN 121
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
G EA+ + + M +G P + +L C G K +F+++V
Sbjct: 122 SCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALV 175
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 153/300 (51%), Gaps = 1/300 (0%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I+ Y + A +F + W S+ISG+ NE E L EM+ GF P
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRIF 255
+ T A + V L G++ H ++ Y+ LIL NSLV MYAK GEI + R+F
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 256 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 315
+M RDK+++ S+I G G+ AL ++ M G+ PD VT + VL+AC+H+ LV
Sbjct: 483 DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVR 542
Query: 316 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 375
+G LF M + +G++ +HY +++L RAG + A + +P EP+ A+ L+
Sbjct: 543 EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKA 602
Query: 376 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 435
C + A K LLE P + ++ L ++YA +L +++ + GV+KA
Sbjct: 603 CLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKA 662
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 179/459 (38%), Gaps = 122/459 (26%)
Query: 35 SLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGN 94
SL C G + G+QLHA I +G ++D L LV YS F L+D A E N
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGL---EFDSVLVPKLVTFYSAFNLLDEAQTITE-N 143
Query: 95 LNNFDDQSLNSMINGYVQAGQLEKAQELFD------------TVPIRNKIA--------- 133
N +I Y++ + +++ ++ T P K
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 134 ----------------WTC--MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN 175
+ C +IS Y G+V A LFD M +RD+++W ++I+ Y
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 176 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGA-----------------------MGSVAY 212
E + EA L M G T+ + G +GSVA
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 213 ------------LDQGRQLHGMQVKTI-YEYDL-ILENSLVSMYAKCGEIDDSYRIFSNM 258
L G+ H + +++ + +D+ + NSL++MY++C ++ ++ +F +
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 259 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
+WNS+I G + + R+ E + + ML G +P+ +T +L A G + G
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 319 E----------------LFNSMVNSY-------GLQPGFDH--------YISIINLLGRA 347
E L+NS+V+ Y + FD Y S+I+ GR
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 348 GK-------VKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
GK KD + R ++P+H A++ C S
Sbjct: 504 GKGEVALAWFKDMD----RSGIKPDHVTMVAVLSACSHS 538
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 15/246 (6%)
Query: 74 LVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQ--AGQLEKAQEL-----FDTV 126
L + F L+ Y S + E L + SL S G+ + GQ A + FD+V
Sbjct: 62 LYEAFRTFSLLRYQSGSHEFVL--YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 127 PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFG 186
+ + + + A + + ++ +P W +I Y++N+ E++S++
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLP------WNVLIGSYIRNKRFQESVSVYK 173
Query: 187 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
MM+ G T+ + A ++ GR +HG + + +L + N+L+SMY + G
Sbjct: 174 RMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFG 233
Query: 247 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 306
++D + R+F M+ RD +SWN++I + + EA + + M G+ VT+ +
Sbjct: 234 KVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAG 293
Query: 307 ACAHAG 312
C AG
Sbjct: 294 GCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 153/300 (51%), Gaps = 1/300 (0%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+I+ Y + A +F + W S+ISG+ NE E L EM+ GF P
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRIF 255
+ T A + V L G++ H ++ Y+ LIL NSLV MYAK GEI + R+F
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 256 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 315
+M RDK+++ S+I G G+ AL ++ M G+ PD VT + VL+AC+H+ LV
Sbjct: 483 DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVR 542
Query: 316 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 375
+G LF M + +G++ +HY +++L RAG + A + +P EP+ A+ L+
Sbjct: 543 EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKA 602
Query: 376 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 435
C + A K LLE P + ++ L ++YA +L +++ + GV+KA
Sbjct: 603 CLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKA 662
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 179/459 (38%), Gaps = 122/459 (26%)
Query: 35 SLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGN 94
SL C G + G+QLHA I +G ++D L LV YS F L+D A E N
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGL---EFDSVLVPKLVTFYSAFNLLDEAQTITE-N 143
Query: 95 LNNFDDQSLNSMINGYVQAGQLEKAQELFD------------TVPIRNKIA--------- 133
N +I Y++ + +++ ++ T P K
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 134 ----------------WTC--MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN 175
+ C +IS Y G+V A LFD M +RD+++W ++I+ Y
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 176 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGA-----------------------MGSVAY 212
E + EA L M G T+ + G +GSVA
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 213 ------------LDQGRQLHGMQVKTI-YEYDL-ILENSLVSMYAKCGEIDDSYRIFSNM 258
L G+ H + +++ + +D+ + NSL++MY++C ++ ++ +F +
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 259 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
+WNS+I G + + R+ E + + ML G +P+ +T +L A G + G
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 319 E----------------LFNSMVNSY-------GLQPGFDH--------YISIINLLGRA 347
E L+NS+V+ Y + FD Y S+I+ GR
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRL 503
Query: 348 GK-------VKDAEEFVLRLPVEPNHAIWGALVGVCGLS 379
GK KD + R ++P+H A++ C S
Sbjct: 504 GKGEVALAWFKDMD----RSGIKPDHVTMVAVLSACSHS 538
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 113/246 (45%), Gaps = 15/246 (6%)
Query: 74 LVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQ--AGQLEKAQEL-----FDTV 126
L + F L+ Y S + E L + SL S G+ + GQ A + FD+V
Sbjct: 62 LYEAFRTFSLLRYQSGSHEFVL--YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 127 PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFG 186
+ + + + A + + ++ +P W +I Y++N+ E++S++
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLP------WNVLIGSYIRNKRFQESVSVYK 173
Query: 187 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
MM+ G T+ + A ++ GR +HG + + +L + N+L+SMY + G
Sbjct: 174 RMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFG 233
Query: 247 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 306
++D + R+F M+ RD +SWN++I + + EA + + M G+ VT+ +
Sbjct: 234 KVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAG 293
Query: 307 ACAHAG 312
C AG
Sbjct: 294 GCLEAG 299
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 159/365 (43%), Gaps = 42/365 (11%)
Query: 14 ALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRS 73
L LFLQM +P TF + +C +QLH+ ++ G++ +DY
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDY------- 448
Query: 74 LVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIA 133
L+S++ Y + + A L D +
Sbjct: 449 ----------------------------VLSSLMRSYAKNQLMNDALLLLDWASGPTSVV 480
Query: 134 WTCMISG-YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 192
+++G Y GQ ++ L ++ D+++W I+ +++ E I LF M+
Sbjct: 481 PLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN 540
Query: 193 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDS 251
P TF + + L G +HG+ KT + D + N L+ MY KCG I
Sbjct: 541 IRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSV 600
Query: 252 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
++F ++ I+W ++I L HG EAL ++ L G PD V+F+ +LTAC H
Sbjct: 601 MKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHG 660
Query: 312 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 371
G+V +G LF M YG++P DHY ++LL R G +K+AE + +P + +W
Sbjct: 661 GMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRT 719
Query: 372 LVGVC 376
+ C
Sbjct: 720 FLDGC 724
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 29/276 (10%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+IS Y G A +F D ++W ++I ++E +A+ LF M HGFSP
Sbjct: 256 LISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPN 315
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
GT+ + G V L GRQ+HGM +K E ++L N+L+ YAKCG ++DS F
Sbjct: 316 QGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFD 375
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA------- 309
+ ++ + WN+++ G ++ L+++ ML+ G P TF L +C
Sbjct: 376 YIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL 434
Query: 310 HAGLVDKGWE----LFNSMVNSYGLQPGFDHYISIIN----------------LLGRAGK 349
H+ +V G+E + +S++ SY + + +++ + R G+
Sbjct: 435 HSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQ 494
Query: 350 VKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADV 385
++ + + L +P+ W + C S +V
Sbjct: 495 YHESVKLISTLE-QPDTVSWNIAIAACSRSDYHEEV 529
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 135 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
TC++ Y + A +F+ MP + W M+S + E + F E++ G S
Sbjct: 153 TCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS 212
Query: 195 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 254
+F + + V LD +QLH K + ++ + NSL+S Y KCG + R+
Sbjct: 213 LTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERM 272
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 314
F + D +SWN++I + +AL ++ +M E G P+ T++ VL + L+
Sbjct: 273 FQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLL 332
Query: 315 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
G ++ ++ + G + G ++I+ + G ++D+ + N W AL+
Sbjct: 333 SCGRQIHGMLIKN-GCETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLS 390
Query: 375 VCGLSKTDADVASRATKRLLEL 396
G + D + ++L++
Sbjct: 391 --GYANKDGPICLSLFLQMLQM 410
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 23/276 (8%)
Query: 93 GNLNNFDDQSLNSMINGYVQAGQLEKAQEL----FDTVPIRNKIAWTC--MISGYLSAGQ 146
G+L N +D+ + S++N +A + + L + + + C +IS Y G+
Sbjct: 6 GDLANHNDRVV-SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGE 64
Query: 147 VFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 206
V A +FD MP+R+ +++ ++I GY + + +A +F EM G+ P T + L
Sbjct: 65 VSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-- 122
Query: 207 MGSVAYLD--QGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 263
S A LD G QLHG+ +K ++ D + L+ +Y + ++ + ++F +M ++
Sbjct: 123 --SCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSL 180
Query: 264 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 323
+WN M+ L G E + + ++ G +FLGVL + +D +L S
Sbjct: 181 ETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCS 240
Query: 324 MVNSYGLQPGFDHYISIINLL----GRAGKVKDAEE 355
+ G D IS++N L G+ G AE
Sbjct: 241 -----ATKKGLDCEISVVNSLISAYGKCGNTHMAER 271
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 215 QGRQLHGMQVK--TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
+ + LH + + ++ + + N+++S+Y K GE+ + ++F M R+K+S+N++I G
Sbjct: 30 RTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKG 89
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 332
S +G +A V+ M FG P+ T G+L+ A L + + + YGL
Sbjct: 90 YSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSC---ASLDVRAGTQLHGLSLKYGLFM 146
Query: 333 GFDHYI--SIINLLGRAGKVKDAEEFVLRLPVE 363
D ++ ++ L GR ++ AE+ +P +
Sbjct: 147 A-DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK 178
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 165/339 (48%), Gaps = 42/339 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
M+ G+A NGF E+AL LF M +PN T++ + AC+ + P L R L
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLV------- 287
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
KL D + R+R LN F +L M + + ++ A+
Sbjct: 288 -KLID-EKRVR-----------------------LNCFVKTALLDM---HAKCRDIQSAR 319
Query: 121 ELFDTVPI-RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 179
+F+ + RN + W MISGY G + A LFD+MP R+ ++W S+I+GY N A
Sbjct: 320 RIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAA 379
Query: 180 EAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSL 238
AI F +M+ +G S P T + A G +A L+ G + K + + SL
Sbjct: 380 LAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSL 439
Query: 239 VSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDT 298
+ MYA+ G + ++ R+F M RD +S+N++ + +G E L + M + G+ PD
Sbjct: 440 IFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDR 499
Query: 299 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 337
VT+ VLTAC AGL+ +G +F S+ N P DHY
Sbjct: 500 VTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHY 533
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 142/285 (49%), Gaps = 34/285 (11%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 163
N MI+GY + G E+A +LFD +P + ++WT MI+G+ + A FD MP++ +
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV 230
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS----------VAYL 213
+W +M+SGY QN +A+ LF +M+ G P T+ ++ A V +
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 214 DQGRQLHGMQVKTIY----------------------EYDLILENSLVSMYAKCGEIDDS 251
D+ R VKT + +L+ N+++S Y + G++ +
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 252 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAH 310
++F M R+ +SWNS+I G + +G+A+ A+ +E M+++G PD VT + VL+AC H
Sbjct: 351 RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 311 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 355
++ G + + ++ Y S+I + R G + +A+
Sbjct: 411 MADLELG-DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 17/229 (7%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
+FDS+ + SM + + ++ + + L+ + G P +F V+ + G
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
L Q + K + D + N ++ MY K ++ + ++F ++ R WN MI G
Sbjct: 122 LFQA-----LVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 332
G EA +++ M E D V++ ++T A ++ + F+ M +
Sbjct: 177 YWKWGNKEEACKLFDMMPE----NDVVSWTVMITGFAKVKDLENARKYFDRMP-----EK 227
Query: 333 GFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALVGVCGL 378
+ ++++ + G +DA +LRL V PN W ++ C
Sbjct: 228 SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 206/471 (43%), Gaps = 37/471 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMT--LSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIV 58
MI F+ NGF +A LF ++ S SK + T +++ +C G+ +H L
Sbjct: 466 MISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL-- 523
Query: 59 NGWKLDDYDG---RLR-----RSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMIN-- 108
KL D RL R L SV + + LE +L F S I
Sbjct: 524 --QKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLE-SLRAFQAMSREGKIRHD 580
Query: 109 --------------GYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLF 154
G V G+ + + ++ T +I+ Y + A +F
Sbjct: 581 LITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT-LITMYGRCKDIESAVKVF 639
Query: 155 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 214
+ D + +W +IS QN+ E LF + P TF L A +
Sbjct: 640 GLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTS 696
Query: 215 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 274
G Q H ++ ++ + + +LV MY+ CG ++ ++F N +WNS+I
Sbjct: 697 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 756
Query: 275 DHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 333
HG +A+ +++ + + P+ +F+ +L+AC+H+G +D+G + M +G++P
Sbjct: 757 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 816
Query: 334 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 393
+H + I+++LGRAGK+++A EF+ + +WGAL+ C D + + L
Sbjct: 817 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNY-HGDTKLGKEVAEVL 875
Query: 394 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK 444
E++P NA +++L N Y E LRK + ++K PG S I V+
Sbjct: 876 FEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
+F M RD ++W ++++ + N +++ F M G TF+ + A S+
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE 304
Query: 213 LDQGRQLHGMQVKTIY--EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 270
L G LHG+ +K+ Y E + + NS++SMY+KCG+ + + +F + RD IS N+++
Sbjct: 305 LTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAIL 364
Query: 271 MGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 329
G + +G EA + M + PD T + + + C +G + V
Sbjct: 365 NGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEM 424
Query: 330 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ S+I++ G+ G A E + + + W +++
Sbjct: 425 QSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMI 467
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 5/239 (2%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+++ Y G++ + LFD + ++D I W SMI+ QN A+ LF EM+ G
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFD 187
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
+ T + A+ S+ + LH + ++T D L N+L+++YAK + + +F+
Sbjct: 188 STTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT 247
Query: 257 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
+M +RD +SWN+++ +G ++L +++M G DTVTF V++AC+ +
Sbjct: 248 HMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTL 307
Query: 317 GWELFNSMVNS-YGLQPGFDHYISIINLLGRAGKVKDA----EEFVLRLPVEPNHAIWG 370
G L ++ S Y + SII++ + G + A EE V R + N + G
Sbjct: 308 GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNG 366
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSP 195
+IS Y G A +F+ + RD I+ ++++G+ N + EA + +M + P
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQP 391
Query: 196 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRI 254
T + G +++ +GR +HG V+ + L + NS++ MY KCG + +
Sbjct: 392 DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 255 FSNMAYRDKISWNSMIMGLSDHGRASEALTVY-ETMLEFGLYPDTV-TFLGVLTAC 308
F +RD +SWNSMI S +G +A ++ E + E+ ++ T L +LT+C
Sbjct: 452 FKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 199/461 (43%), Gaps = 69/461 (14%)
Query: 9 GFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHA---------QLIVN 59
GF +EA+++F +M + +P T S+ AC+ +G+ +HA +V+
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 60 GWKLDDYDG--RL---RRSLVRMYS------VFGLMDYASNALEGNLNNFDD-------Q 101
D Y RL RR + S + YA + L D
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 102 SLNSMINGYVQAGQLEKA--------QEL--FDTVPI----------------------- 128
S N+M+ GYV A + ++A QE+ D V +
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 129 ------RNKIAWTCMISGYLSAGQVFKACDLFDSMPD-RDSIAWTSMISGYVQNELIAEA 181
N I ++ Y G + A F M + RD ++W ++++G + +A
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Query: 182 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 241
+S F M P T A L ++ L+ G+ +HG ++ Y+ D+++ ++V M
Sbjct: 482 LSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDM 540
Query: 242 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 301
Y+KC D + +F A RD I WNS+I G +GR+ E ++ + G+ PD VTF
Sbjct: 541 YSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTF 600
Query: 302 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 361
LG+L AC G V+ G++ F+SM Y + P +HY +I L + G + EEF+L +P
Sbjct: 601 LGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMP 660
Query: 362 VEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAP 402
+P + + C + + + + A KRL+ L P
Sbjct: 661 FDPPMQMLTRINDACQRYRW-SKLGAWAAKRLMNDHYLQPP 700
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%)
Query: 138 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
I Y G V A +LF+ MP+RD +W ++I+ QN + E +F M G
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 257
+FA + + G + L RQLH VK Y ++ LE S+V +Y KC + D+ R+F
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
+ +SWN ++ + G EA+ ++ MLE + P T V+ AC+ + ++ G
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 41/266 (15%)
Query: 153 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
+FD + + ++W ++ Y++ EA+ +F +M+ PLN T + + A
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 272
L+ G+ +H + VK D ++ S+ MY KC ++ + R+F +D SW S + G
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSG 338
Query: 273 LSDHGRASEALTVYETMLEFGLYP-------------------------------DTVTF 301
+ G EA +++ M E + D VT
Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTL 398
Query: 302 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFV 357
+ +L C+ V G + + + G+D + + N L G+ G ++ A +
Sbjct: 399 VWILNVCSGISDVQMG-----KQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 358 LRLPVEPNHAIWGALV-GVCGLSKTD 382
++ + W AL+ GV + +++
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSE 479
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 203 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 262
LF + S A + Q R++ V + L N + Y KCG +DD+ +F M RD
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 263 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV--DKGWEL 320
SWN++I + +G + E ++ M G+ +F GVL +C GL+ +
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQ 183
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ V YG D SI+++ G+ + DA V V P+ W +V
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARR-VFDEIVNPSDVSWNVIV 235
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ G A G E+AL F M + ++KP+ T +L CA + LG+ +H LI +G
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDG 526
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
+K+D +R ++V MYS DYA + D NS+I G + G+ ++
Sbjct: 527 YKIDVV---IRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNGRSKEVF 582
Query: 121 ELF 123
ELF
Sbjct: 583 ELF 585
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 145/286 (50%), Gaps = 21/286 (7%)
Query: 173 VQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL 232
Q L +AI E++ G P F +LF + ++ L+ +++H +++ + D
Sbjct: 216 CQRRLYKDAI----ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDP 271
Query: 233 ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF 292
L N ++SM+ +C I D+ R+F +M +D SW+ M+ SD+G +AL ++E M +
Sbjct: 272 KLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKH 331
Query: 293 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 352
GL P+ TFL V ACA G +++ + F+SM N +G+ P +HY+ ++ +LG+ G + +
Sbjct: 332 GLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVE 391
Query: 353 AEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA---------PG 403
AE+++ LP EP W A+ L D D+ + ++++DP A P
Sbjct: 392 AEQYIRDLPFEPTADFWEAMRNYARL-HGDIDLEDYMEELMVDVDPSKAVINKIPTPPPK 450
Query: 404 HVALCNIYAANDRHIELTSLR------KEMRI-KGVRKAPGCSWIL 442
N+ + R +E +L KEM KGV P ++L
Sbjct: 451 SFKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVVYVPDTRFVL 496
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+IS + + A +FD M D+D +W M+ Y N + +A+ LF EM HG P
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 197 NGTFAVLFGAMGSVA-------YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 249
TF +F A +V + D + HG+ KT E+ L ++ + KCG +
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKT--EHYL----GVLGVLGKCGHLV 390
Query: 250 DSYRIFSNMAYRDKIS-WNSM 269
++ + ++ + W +M
Sbjct: 391 EAEQYIRDLPFEPTADFWEAM 411
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 175/401 (43%), Gaps = 49/401 (12%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSK--PNGETFISLAYACAGLSFPYLGRQLHAQLIV 58
MI G A N EAL LF M +S+ K PN ++ + LG+++HA ++
Sbjct: 286 MIAGLAHNKRQWEALGLFRTM-ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVL- 343
Query: 59 NGWKLDDYDGR--LRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQL 116
K +Y + + L+ +Y G M G+ + S ++++GY G+
Sbjct: 344 ---KSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGS-KQRNAISWTALMSGYAANGRF 399
Query: 117 EKA--------QELF--DTVPIR-----------------------------NKIAWTCM 137
++A QE F D V I N T +
Sbjct: 400 DQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSL 459
Query: 138 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
+ Y G LFD + R+ AWT+MI YV+N + I +F M+ P +
Sbjct: 460 MVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDS 519
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 257
T + + L G++LHG +K +E + ++ MY KCG++ + F
Sbjct: 520 VTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDA 579
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
+A + ++W ++I + +A+ +E M+ G P+T TF VL+ C+ AG VD+
Sbjct: 580 VAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEA 639
Query: 318 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 358
+ FN M+ Y LQP +HY +I LL R G+V++A+ +
Sbjct: 640 YRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAV 680
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 167/384 (43%), Gaps = 54/384 (14%)
Query: 5 FAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLD 64
FA E AL + + N TF +L AC G+Q+H + +NG + +
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 65 DYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFD 124
++ LR LV MY+ G + A + + ++ + S N+++ G V +G+ ++ Q++
Sbjct: 146 EF---LRTKLVHMYTACGSVKDAQKVFDESTSS-NVYSWNALLRGTVISGK-KRYQDVLS 200
Query: 125 T-------------------------------------VPIRNKI-----AWTCMISGYL 142
T + I+N + T ++ Y
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 143 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFA 201
G+V A +FD + +RD + W +MI+G N+ EA+ LF M++ P +
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTI-YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+ +G V L G+++H +K+ Y + + L+ +Y KCG++ R+F
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQ 380
Query: 261 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
R+ ISW +++ G + +GR +AL M + G PD VT VL CA + +G E
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE- 439
Query: 321 FNSMVNSYGLQPGFDHYISIINLL 344
++ Y L+ F +S++ L
Sbjct: 440 ----IHCYALKNLFLPNVSLVTSL 459
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 15/188 (7%)
Query: 195 PLNGT-FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 253
P+N T F+ L A L G+Q+H E + L LV MY CG + D+ +
Sbjct: 108 PVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQK 167
Query: 254 IFSNMAYRDKISWNSMIMG--LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 311
+F + SWN+++ G +S R + L+ + M E G+ + + V + A A
Sbjct: 168 VFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGA 227
Query: 312 GLVDKGWE-----LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 366
+ +G + + N + NS L+ S++++ + GKV A V VE +
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLK------TSLVDMYFKCGKVGLARR-VFDEIVERDI 280
Query: 367 AIWGALVG 374
+WGA++
Sbjct: 281 VVWGAMIA 288
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 202/461 (43%), Gaps = 62/461 (13%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ F G + ++L+M L NG T+ + C+ Y G+QLH+ ++ +G
Sbjct: 184 LLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSG 243
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDY--ASNALEGNLNNF------DDQSLNSMINGYVQ 112
W + + ++ L+DY A L G++ +F D S NS+++
Sbjct: 244 WNISN-----------IFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 113 AGQLEKAQELFDTV----------PIRNKIAWTCMISGYLSAGQV--------------- 147
G + + +LF + P + + + S S Q+
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 148 --------FKACD-------LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 192
+ C+ L+ S+P + S+++ + + + I +FG M+ G
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEG 412
Query: 193 FSPLNGTFAVLFGAMGSV--AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 250
T + + A+ L +H +K+ Y D+ + SL+ Y K G+ +
Sbjct: 413 TGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEV 472
Query: 251 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 310
S ++F + + S+I G + +G ++ + + M L PD VT L VL+ C+H
Sbjct: 473 SRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSH 532
Query: 311 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 370
+GLV++G +F+S+ + YG+ PG Y +++LLGRAG V+ AE +L+ + + W
Sbjct: 533 SGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWS 592
Query: 371 ALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIY 411
+L+ C + + + + RA + L+ L+P N ++ + Y
Sbjct: 593 SLLQSCRIHRNET-IGRRAAEVLMNLEPENFAVYIQVSKFY 632
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 114/240 (47%), Gaps = 15/240 (6%)
Query: 150 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 209
A LFD M DR+ ++ + Q ++ M G + T+ +
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 210 VAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 268
+ +G+QLH + VK+ + ++ + N LV Y+ CG++ S R F+ + +D ISWNS
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 269 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 328
++ +D+G ++L ++ M +G P F+ L C+ + G + ++ Y
Sbjct: 286 IVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQ-----IHCY 340
Query: 329 GLQPGFD----HYIS-IINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSK 380
L+ GFD H S +I++ G+ ++++ LP +E +++ +L+ CG++K
Sbjct: 341 VLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMH-CGITK 399
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%)
Query: 138 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
I + +G + A + FD M RD + + +ISG + AI L+ EM++ G
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 257
TF + + +G Q+H + + ++ + ++LV +YA +D + ++F
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 258 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
M R+ N ++ G + VY M G+ + +T+ ++ C+H LV +G
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 318 WELFNSMVNS 327
+L + +V S
Sbjct: 233 KQLHSLVVKS 242
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 182/412 (44%), Gaps = 45/412 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSK-PNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
MI G+ G +EA LF + N F+ L C+ + LGRQ+H ++
Sbjct: 154 MIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMV-- 211
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALE--------------------------- 92
K+ + + SLV Y+ G + A A +
Sbjct: 212 --KVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAI 269
Query: 93 ----GNLNNF---DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGY 141
G LN++ ++ ++ S++ + L +++ V R + T ++ Y
Sbjct: 270 GMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMY 329
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G++ +FD M +R+++ WTS+I+ + + EAISLF M N T
Sbjct: 330 AKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVV 389
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
+ A GSV L G++LH +K E ++ + ++LV +Y KCGE D++ + + R
Sbjct: 390 SILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR 449
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
D +SW +MI G S G SEAL + M++ G+ P+ T+ L ACA++ + G +
Sbjct: 450 DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIH 509
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 373
+ ++ L F ++I++ + G V +A +P E N W A++
Sbjct: 510 SIAKKNHALSNVFVGS-ALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 5/286 (1%)
Query: 126 VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLF 185
V + N I + ++ Y G++ A FD M ++D I+WT++IS + +AI +F
Sbjct: 213 VGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMF 272
Query: 186 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 245
M+ H F P T + A L GRQ+H + VK + + D+ + SL+ MYAKC
Sbjct: 273 IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC 332
Query: 246 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 305
GEI D ++F M+ R+ ++W S+I + G EA++++ M L + +T + +L
Sbjct: 333 GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSIL 392
Query: 306 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 365
AC G + G EL ++ + ++ +++ L + G+ +DA + +LP +
Sbjct: 393 RACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRD 450
Query: 366 HAIWGALVGVC---GLSKTDADVASRATKRLLELDPLNAPGHVALC 408
W A++ C G D + +E +P + C
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKAC 496
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 123/239 (51%), Gaps = 4/239 (1%)
Query: 137 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+IS + G + A +FDSMP+++++ WT+MI GY++ L EA +LF + + HG
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 197 NGT-FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 255
N F L A + GRQ+HG VK + +LI+E+SLV YA+CGE+ + R F
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVK-VGVGNLIVESSLVYFYAQCGELTSALRAF 241
Query: 256 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 315
M +D ISW ++I S G +A+ ++ ML P+ T +L AC+ +
Sbjct: 242 DMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALR 301
Query: 316 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 374
G ++ +S+V ++ S++++ + G++ D + V N W +++
Sbjct: 302 FGRQV-HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK-VFDGMSNRNTVTWTSIIA 358
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 43/320 (13%)
Query: 28 PNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYA 87
PN T S+ AC+ GRQ+H+ ++ K D + G SL+ MY+ G +
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGT---SLMDMYAKCGEISDC 338
Query: 88 SNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIA-------------- 133
+G ++N + + S+I + + G E+A LF + R+ IA
Sbjct: 339 RKVFDG-MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 134 -------------------------WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSM 168
+ ++ Y G+ A ++ +P RD ++WT+M
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 169 ISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIY 228
ISG +EA+ EM+ G P T++ A + L GR +H + K
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHA 517
Query: 229 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 288
++ + ++L+ MYAKCG + +++R+F +M ++ +SW +MIMG + +G EAL +
Sbjct: 518 LSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYR 577
Query: 289 MLEFGLYPDTVTFLGVLTAC 308
M G D F +L+ C
Sbjct: 578 MEAEGFEVDDYIFATILSTC 597
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 107/255 (41%), Gaps = 44/255 (17%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I A GF EEA+ LF M N T +S+ AC + LG++LHAQ+I N
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 415
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA- 119
+ + Y G +LV +Y G A N L+ L + D S +MI+G G +A
Sbjct: 416 IEKNVYIGS---TLVWLYCKCGESRDAFNVLQ-QLPSRDVVSWTAMISGCSSLGHESEAL 471
Query: 120 -------QELFDTVP-------------------------------IRNKIAWTCMISGY 141
QE + P + N + +I Y
Sbjct: 472 DFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMY 531
Query: 142 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
G V +A +FDSMP+++ ++W +MI GY +N EA+ L M A GF + FA
Sbjct: 532 AKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFA 591
Query: 202 VLFGAMGSVAYLDQG 216
+ G + LD+
Sbjct: 592 TILSTCGDIE-LDEA 605
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 217 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 276
+++H M +K + + N+L+S + G++ + ++F +M ++ ++W +MI G +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 277 GRASEALTVYETMLEFGL-YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 335
G EA ++E ++ G+ + + F+ +L C+ + G ++ +MV + G
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMV-----KVGVG 216
Query: 336 HYI---SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 376
+ I S++ + G++ A + E + W A++ C
Sbjct: 217 NLIVESSLVYFYAQCGELTSALR-AFDMMEEKDVISWTAVISAC 259
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 182/375 (48%), Gaps = 22/375 (5%)
Query: 86 YASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTCMISGY 141
Y S +E L+ D + S+I GY Q L+ A ++F+ +P+ RN++A+T +I G
Sbjct: 240 YVSKIVEAGLDP-DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 142 LSAGQVFKACDLFDSMPDRDSI----AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
A ++ +A DLF M D + +T +I +E +EA++L EM G P
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 198 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 257
T+ VL ++ S ++ R+L G ++ ++I N+L++ Y K G I+D+ +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 258 MAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 313
M R + ++N +I G +A+ V MLE + PD VT+ ++ +G
Sbjct: 419 MESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 314 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWG 370
D + L S++N GL P Y S+I+ L ++ +V++A + L V PN ++
Sbjct: 478 FDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 371 ALV-GVCGLSKTDADVASRATKRLLELDPL-NAPGHVALCNIYAANDRHIELTSLRKEMR 428
AL+ G C K D A +++L + L N+ AL + A+ + E T L ++M
Sbjct: 537 ALIDGYCKAGKVDE--AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 429 IKGVRKAPGCSWILV 443
G++ IL+
Sbjct: 595 KIGLQPTVSTDTILI 609
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 15/270 (5%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI----AWTCMISGYLSAGQVFKACDLF 154
D + NS+I+G ++G + A L + R + +T MI + +V +ACDLF
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 155 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
DS+ + + + +T++I GY + + EA + +M++ P + TF L + +
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISW 266
L + L VK + + + L+ K G+ D +Y F M D ++
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
+ I GR +A + M E G+ PD T+ ++ G + +++ M +
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 327 SYGLQPGFDHYISIIN--LLGRAGKVKDAE 354
+ G +P ++S+I L + GK K +E
Sbjct: 701 T-GCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 117/277 (42%), Gaps = 14/277 (5%)
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
+ ++++ + L+ E ++ EM+ P T+ + + +++ Q
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIMGLSDHGRA 279
V+ + D SL+ Y + ++D ++++F+ M R+++++ +I GL R
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 280 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 339
EA+ ++ M + +P T+ ++ + + + L M + G++P Y
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET-GIKPNIHTYTV 363
Query: 340 IINLLGRAGKVKDAEEFV---LRLPVEPNHAIWGALV-GVC--GLSKTDADVASRATKRL 393
+I+ L K + A E + L + PN + AL+ G C G+ + DV R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR- 422
Query: 394 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIK 430
+L P N + L Y ++ H + L K + K
Sbjct: 423 -KLSP-NTRTYNELIKGYCKSNVHKAMGVLNKMLERK 457
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 181/399 (45%), Gaps = 30/399 (7%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I GF + G + AL LF +M PN T+ +L L G +L + + G
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 61 WK--LDDYD----GRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG 114
+ L Y+ G R RM V + + + D+ + N++I GY + G
Sbjct: 271 LEPNLISYNVVINGLCREG--RMKEV----SFVLTEMNRRGYSLDEVTYNTLIKGYCKEG 324
Query: 115 QLEKA----QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWT 166
+A E+ + I +T +I AG + +A + D M R + +T
Sbjct: 325 NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYT 384
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF-AVLFGAMGSVAYLDQGRQLHGMQVK 225
+++ G+ Q + EA + EM +GFSP T+ A++ G + D L M+ K
Sbjct: 385 TLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK 444
Query: 226 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASE 281
+ D++ ++++S + + ++D++ R+ M + D I+++S+I G + R E
Sbjct: 445 GLSP-DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 341
A +YE ML GL PD T+ ++ A G ++K +L N MV G+ P Y +I
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLI 562
Query: 342 NLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALVGVCG 377
N L + + ++A+ +L+L E P+ + L+ C
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 170/390 (43%), Gaps = 34/390 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G+ G + +AL++ +M P+ T+ SL ++ + Q+ V G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNAL-EGNLNNFDDQ--SLNSMINGYVQAGQLE 117
++ R +LV +S G M+ A L E N N F + N++ING+ G++E
Sbjct: 376 LCPNE---RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 118 KAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMI 169
A + + + + + ++++ ++SG+ + V +A + M ++ D+I ++S+I
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 170 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 229
G+ + EA L+ EM+ G P T+ L A L++ QLH V+
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 230 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI-------------------SWNSMI 270
D++ + L++ K ++ R+ + Y + + S S+I
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
G G +EA V+E+ML PD + ++ AG + K + L+ MV S G
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS-GF 671
Query: 331 QPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
I+++ L + GKV + ++ +
Sbjct: 672 LLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 136/314 (43%), Gaps = 20/314 (6%)
Query: 144 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 203
A VFK ++ +S + + +I G+ I A++LF +M G P T+ L
Sbjct: 189 AENVFK--EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTL 246
Query: 204 FGAMGSVAYLDQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR- 261
+ +D G + L M +K + E +LI N +++ + G + + + + M R
Sbjct: 247 IDGYCKLRKIDDGFKLLRSMALKGL-EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 262 ---DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 318
D++++N++I G G +AL ++ ML GL P +T+ ++ + AG +++
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 319 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-G 374
E + M GL P Y ++++ + G + +A + + P+ + AL+ G
Sbjct: 366 EFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 375 VCGLSKTDADVASRATKRLLELDPLNAPGHVAL---CNIYAANDRHIELTSLRKEMRIKG 431
C K + +A + L P L C Y + E +++EM KG
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD----EALRVKREMVEKG 480
Query: 432 VRKAPGCSWILVKG 445
++ L++G
Sbjct: 481 IKPDTITYSSLIQG 494
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 178 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL-HGMQVKTIYEYDLILEN 236
I+ A ++F EM+ SP T+ +L +D L M+ K +++ N
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP-NVVTYN 244
Query: 237 SLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEF 292
+L+ Y K +IDD +++ +MA + + IS+N +I GL GR E V M
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 293 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 352
G D VT+ ++ G + + M+ +GL P Y S+I+ + +AG +
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 353 AEEFVLRLPVE---PNHAIWGALV 373
A EF+ ++ V PN + LV
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLV 387
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 17/249 (6%)
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 267
G V L++ R +H I D ++++ MY+ C DD+ +F+ M R+ +W
Sbjct: 123 GEVEALEEARVVHD----CITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWG 178
Query: 268 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 327
+MI L+ +G A+ ++ +E G PD F V AC G +++G F SM
Sbjct: 179 TMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRD 238
Query: 328 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 387
YG+ + Y+++I +L G + +A +FV R+ VEP+ +W L+ +C + ++
Sbjct: 239 YGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGY-LELGD 297
Query: 388 RATKRLLELDP--LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKG 445
R + + +LD ++ + L A++ +L LR + +R P K
Sbjct: 298 RFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRY---CQMIRDDP-------KK 347
Query: 446 RVHVFSSGD 454
R+H F +GD
Sbjct: 348 RMHEFRAGD 356
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 174/384 (45%), Gaps = 30/384 (7%)
Query: 12 EEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYDGR-- 69
+EA +F +M P+ TF SL GL +GR A + K+ D D R
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLI---DGLG--KVGRVDDAYKVYE--KMLDSDCRTN 481
Query: 70 --LRRSLVRMYSVFGLMDYASNALEGNLN---NFDDQSLNSMINGYVQAGQLEKAQELFD 124
+ SL++ + G + + +N + D Q LN+ ++ +AG+ EK + +F+
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 125 TVPIRNKI----AWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNE 176
+ R + +++ +I G + AG + +LF SM ++ D+ A+ +I G+ +
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG 601
Query: 177 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN 236
+ +A L EM GF P T+ + + + LD+ L E ++++ +
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 237 SLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEF 292
SL+ + K G ID++Y I + + + +WNS++ L +EAL +++M E
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Query: 293 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 352
P+ VT+ ++ +K + + M G++P Y ++I+ L +AG + +
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 353 AEEFVLRLPVE---PNHAIWGALV 373
A R P+ A + A++
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMI 804
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 161/366 (43%), Gaps = 24/366 (6%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+IG F+ + L LF QM +P F +L F GR A +++
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRG-----FAKEGRVDSALSLLDE 228
Query: 61 WKLD--DYDGRLRRSLVRMYSVFGLMDYA---SNALEGNLNNFDDQSLNSMINGYVQAGQ 115
K D D L + + G +D A + +E N D+ + SMI +A +
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 116 LEKAQELFDTVPIRNKI----AWTCMISGYLSAGQVFKACDLFDSMPDRDS----IAWTS 167
L++A E+F+ + ++ A+ MI GY SAG+ +A L + + S IA+
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 168 MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI 227
+++ + + EA+ +F EM +P T+ +L + LD +L K
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 228 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEAL 283
++ N +V K ++D++ +F M Y+ D+I++ S+I GL GR +A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 284 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 343
VYE ML+ +++ + ++ + G + G +++ M+N P + ++
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ-NCSPDLQLLNTYMDC 526
Query: 344 LGRAGK 349
+ +AG+
Sbjct: 527 MFKAGE 532
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 140/332 (42%), Gaps = 33/332 (9%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACD-------LF 154
S+N+ I + + K +E +D V + K + S Y + F A + LF
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 155 DSMPD---RDSIA-WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
M + ++ +T++I G+ + + A+SL EM + + V + G V
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 211 AYLDQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI----S 265
+D + H ++ + + D + S++ + K +D++ +F ++ ++ +
Sbjct: 252 GKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 266 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
+N+MIMG G+ EA ++ E G P + + +LT G VD+ ++F M
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 326 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE-----PNHAIWGALVG-VCGLS 379
P Y +I++L RAGK+ A F LR ++ PN +V +C
Sbjct: 371 KDAA--PNLSTYNILIDMLCRAGKLDTA--FELRDSMQKAGLFPNVRTVNIMVDRLCKSQ 426
Query: 380 KTDADVASRATKRLLELD-PLNAPGHVALCNI 410
K D A E+D + P + C++
Sbjct: 427 KLD-----EACAMFEEMDYKVCTPDEITFCSL 453
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 174/439 (39%), Gaps = 68/439 (15%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGR-----QLHAQ 55
+I GFA G + AL L +M S + I L C SF +G+ + +
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDAD----IVLYNVCID-SFGKVGKVDMAWKFFHE 263
Query: 56 LIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNA---LEGNLNNFDDQSLNSMINGYVQ 112
+ NG K D+ S++ + +D A LE N + N+MI GY
Sbjct: 264 IEANGLKPDEV---TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 113 AGQLEKAQELFDTV----PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD--------- 159
AG+ ++A L + I + IA+ C+++ G+V +A +F+ M
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTY 380
Query: 160 -------------------RDSIAWTS----------MISGYVQNELIAEAISLFGEMMA 190
RDS+ M+ +++ + EA ++F EM
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 191 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 250
+P TF L +G V +D +++ + + + I+ SL+ + G +D
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 251 SYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 306
++I+ +M + D N+ + + G + ++E + PD ++ ++
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 307 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV---E 363
AG ++ +ELF SM G Y +I+ + GKV A + + + E
Sbjct: 561 GLIKAGFANETYELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 364 PNHAIWGALVGVCGLSKTD 382
P +G+++ GL+K D
Sbjct: 620 PTVVTYGSVID--GLAKID 636
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 105 SMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR 160
S+I+G + +L++A LF+ + N + ++ +I G+ G++ +A + + + +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 161 ----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD-- 214
+ W S++ V+ E I EA+ F M +P T+ +L + V +
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 215 ----QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF----SNMAYRDKISW 266
Q Q GM+ TI +++S AK G I ++ +F +N D +
Sbjct: 747 FVFWQEMQKQGMKPSTISY------TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGL 294
N+MI GLS+ RA +A +++E GL
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGL 828
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 177/403 (43%), Gaps = 34/403 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G G EAL L +M KP+ I++ GL G++ A L+++
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPD---LITINTLVNGLCLS--GKEAEAMLLID- 217
Query: 61 WKLDDYD--------GRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQ 112
K+ +Y G + + + M+ E N+ D + +I+G +
Sbjct: 218 -KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK-LDAVKYSIIIDGLCK 275
Query: 113 AGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIA 164
G L+ A LF+ + ++ N I + +I G+ +AG+ L M R + +
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 165 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 224
++ +I +V+ + EA L EM+ G +P T+ L +LD+ Q+ + V
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 225 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRAS 280
+ ++ N L++ Y K IDD +F M+ R D +++N++I G + G+ +
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 281 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 340
A +++ M+ + P+ VT+ +L G +K E+F + S ++ Y I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS-KMELDIGIYNII 514
Query: 341 INLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSK 380
I+ + A KV DA + LP V+P + ++G GL K
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG--GLCK 555
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 154
D + S+I+G+ + L+KA ++ D + + N + +I+GY A ++ +LF
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 155 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
M R D++ + ++I G+ + + A LF EM++ P T+ +L +
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI----SW 266
++ ++ K+ E D+ + N ++ ++DD++ +F ++ + ++
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 301
N MI GL G SEA ++ M E G PD T+
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 22/265 (8%)
Query: 101 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 160
+ L+S ++ +VQ LE + N++++ C G F + DR
Sbjct: 7 RRLSSQVSKFVQPRLLETGTLRIALINCPNELSFCC------ERG--------FSAFSDR 52
Query: 161 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL- 219
+ + SG V + +AI LF +M+ P F+ LF A+ D L
Sbjct: 53 NLSYRERLRSGLVDIK-ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALC 111
Query: 220 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN---MAYR-DKISWNSMIMGLSD 275
M++K I ++L + +++ + +C ++ ++ + Y + I+++++I GL
Sbjct: 112 KQMELKGI-AHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCL 170
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 335
GR SEAL + + M+E G PD +T ++ +G + L + MV YG QP
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAV 229
Query: 336 HYISIINLLGRAGKVKDAEEFVLRL 360
Y ++N++ ++G+ A E + ++
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKM 254
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 21/264 (7%)
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 267
G L + + +HG ++ DL + L+ MY+ CG +++ +F M+ ++ +W
Sbjct: 265 GEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWC 324
Query: 268 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 327
+I + +G +A+ ++ E G PD F G+ AC G VD+G F SM
Sbjct: 325 IIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRD 384
Query: 328 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 387
YG+ P + Y+S++ + G + +A EFV R+P+EPN +W L+ + + + ++
Sbjct: 385 YGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRV-HGNLELGD 443
Query: 388 RATKRLLELDP--LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL--V 443
+ + LDP LN + A++ +E SL+K S IL V
Sbjct: 444 YCAEVVEFLDPTRLNKQSREGFIPVKASD---VEKESLKKR------------SGILHGV 488
Query: 444 KGRVHVFSSGDRLEPHVEDILLQI 467
K + F +GD P D L Q+
Sbjct: 489 KSSMQEFRAGDTNLPE-NDELFQL 511
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 177/410 (43%), Gaps = 52/410 (12%)
Query: 13 EALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNGWKLDDYD----- 67
EAL L +M L P+ ETF + ++ ++++ G+ DD
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 68 ------GRLR-----------------RSLVRMYSVFGLMDYASNALEGNLNNF----DD 100
GR+ +L+ + G +D A L + ++ D
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 101 QSLNSMINGYVQAGQLEKAQELFDTVPIRNK------IAWTCMISGYLSAGQVFKACDLF 154
+ NS+I GY + G + A E+ +RNK ++T ++ G+ G++ +A ++
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHD--MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 155 DSMP----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
+ M +++ + +IS + + I EA+ +F EM G P TF L + V
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 266
+ L + + + N+L++ + + GEI ++ ++ + M ++ D+I++
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
NS+I GL G +A +++E ML G P ++ ++ +G+V++ E MV
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV- 626
Query: 327 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 373
G P + S+IN L RAG+++D +L E P+ + L+
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 14/291 (4%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
DD + ++NG + G+++ A++LF +P + + +I G+++ G++ A + M
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 159 DR-----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
D + S+I GY + L+ A+ + +M G P ++ +L + +
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSM 269
D+ + + + + N L+S + K I ++ IF M + D ++NS+
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 329
I GL + AL + M+ G+ +TVT+ ++ A G + + +L N MV G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ-G 559
Query: 330 LQPGFDHYISIINLLGRAGKVKDAE---EFVLRLPVEPNHAIWGALV-GVC 376
Y S+I L RAG+V A E +LR P++ L+ G+C
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 52/280 (18%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTCMISGYLSAGQVFKACDLFDSM 157
S +++G+ + G++++A + + + N + + C+IS + ++ +A ++F M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 158 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
P + D + S+ISG + + I A+ L +M++ G T+ L A +
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--------------- 258
+ R+L V D I NSL+ + GE+D + +F M
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 259 ------------------------AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
+ D +++NS+I GL GR + LT++ + G+
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 334
PDTVTF +++ G V L + G++ GF
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDE-----GIEDGF 700
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 40/292 (13%)
Query: 181 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 240
A ++F +M++ P TF V+ A +V +D L K + ++ +L+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 241 MYAKCGEIDDSYRIFSNM----AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 296
+KC ++++ ++ M D ++N +I+GL R +EA + ML G P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 297 DTVTFLGVLTACAHAGLVDKGWELF-------------------------------NSMV 325
D +T+ ++ G VD +LF + MV
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 326 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGLSKT 381
SYG+ P Y S+I + G V A E + + +PN + LV G C L K
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 382 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 433
D L P N G L + + R E + +EM KG +
Sbjct: 441 DEAYNVLNEMSADGLKP-NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 185/417 (44%), Gaps = 36/417 (8%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN- 59
++ GF G EA+ L +M +P+ ++++ GL GR A ++++
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPD---LVTVSTLINGLCLK--GRVSEALVLIDR 200
Query: 60 ----GWKLDD--YDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQA 113
G++ D+ Y L R S L D E N+ Q + +I+ +
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALAL-DLFRKMEERNIKASVVQ-YSIVIDSLCKD 258
Query: 114 GQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAW 165
G + A LF+ + ++ + + ++ +I G + G+ + M R D + +
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 166 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 225
+++I +V+ + EA L+ EM+ G +P T+ L L + Q+ + V
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 226 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASE 281
E D++ + L++ Y K +DD R+F ++ + + I++N++++G G+ +
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 282 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 341
A +++ M+ G+ P VT+ +L G ++K E+F M S + G Y II
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR-MTLGIGIYNIII 497
Query: 342 NLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSK----TDADVASRATK 391
+ + A KV DA L V+P+ + ++G GL K ++AD+ R K
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG--GLCKKGSLSEADMLFRKMK 552
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 123/269 (45%), Gaps = 14/269 (5%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 154
D + +++I+ +V+ G+L +A+EL++ + R + I + +I G+ + +A +F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 155 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
D M + D + ++ +I+ Y + + + + + LF E+ + G P T+ L
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS----- 265
L+ ++L V ++ L+ GE++ + IF M + +++
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ-KSRMTLGIGI 492
Query: 266 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
+N +I G+ + + +A +++ ++ + G+ PD VT+ ++ G + + LF M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 326 NSYGLQPGFDHYISIINLLGRAGKVKDAE 354
F + I I LG +G + E
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 17/181 (9%)
Query: 178 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD------QGRQLHGMQVKTIYEYD 231
+ +AI LF M+ P F L A+ D +G +L+G+ E+D
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGI------EHD 104
Query: 232 LILENSLVSMYAKCGEIDDSYRIFS---NMAYR-DKISWNSMIMGLSDHGRASEALTVYE 287
+ +++ Y + ++ ++ + + Y D I++++++ G GR SEA+ + +
Sbjct: 105 MYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVD 164
Query: 288 TMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA 347
M+E PD VT ++ G V + L + MV YG QP Y ++N L ++
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV-EYGFQPDEVTYGPVLNRLCKS 223
Query: 348 G 348
G
Sbjct: 224 G 224
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 111/283 (39%), Gaps = 47/283 (16%)
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 218
+ D T MI+ Y + + + A S+ G G+ P TF+ L G
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV----------NGFC 151
Query: 219 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHG 277
L G + + D ++E M R D ++ +++I GL G
Sbjct: 152 LEGRVSEAVALVDRMVE----------------------MKQRPDLVTVSTLINGLCLKG 189
Query: 278 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 337
R SEAL + + M+E+G PD VT+ VL +G +LF M ++ Y
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQY 248
Query: 338 ISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGLSKTDADVASRATKRL 393
+I+ L + G DA + ++ + + +L+ G+C K D K L
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD-----GAKML 303
Query: 394 LELDPLNAPGHV----ALCNIYAANDRHIELTSLRKEMRIKGV 432
E+ N V AL +++ + +E L EM +G+
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 18/243 (7%)
Query: 93 GNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQV 147
G++ + D + SMI+GY +AG++ +A L D + +R + + ++ GY AG++
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM-LRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 148 FKACDL------FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
A ++ F PD + +TS+I GY + +++ L+ EM A G P T++
Sbjct: 329 LTAEEIRGKMISFGCFPD--VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
+L A+ + L + R+L G + N ++ + K G+++++ I M +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 262 ----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
DKI++ +I+G GR EA++++ M+ G PD +T +L+ AG+ +
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Query: 318 WEL 320
+ L
Sbjct: 507 YHL 509
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 53/305 (17%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQEL------FDTVPIRNKIAWTCMISGYLSAGQVFKACD 152
D ++ N +I G G+ EKA EL F P + + + +I G+ + ++ KA +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP--DIVTYNTLIQGFCKSNELNKASE 262
Query: 153 LFD-----SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 207
+F S+ D + +TSMISGY + + EA SL +M+ G P N TF VL
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--------- 258
+ ++ G + D++ SL+ Y + G++ +R++ M
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 259 --------------------------AYRDKIS----WNSMIMGLSDHGRASEALTVYET 288
A +D I +N +I G G+ +EA + E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 289 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 348
M + PD +TF ++ G + + +F+ MV + G P S+++ L +AG
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV-AIGCSPDKITVSSLLSCLLKAG 501
Query: 349 KVKDA 353
K+A
Sbjct: 502 MAKEA 506
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 144/336 (42%), Gaps = 58/336 (17%)
Query: 67 DGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQS----LNSMINGYVQAGQLEKAQEL 122
+ RL LV ++ G + +A+ L L +F+ + +NS++N V+ ++E A +L
Sbjct: 137 NNRLLGFLVSSFAEKGKLHFATALL---LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKL 193
Query: 123 FDT----VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWTSMISGYVQ 174
FD + + +I G G+ KA +L M + D + + ++I G+ +
Sbjct: 194 FDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK 253
Query: 175 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 234
+ + +A +F ++ + GSV D++
Sbjct: 254 SNELNKASEMFKDVKS-----------------GSVC-----------------SPDVVT 279
Query: 235 ENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIMGLSDHGRASEALTVYETML 290
S++S Y K G++ ++ + +M Y +++N ++ G + G A + M+
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 291 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV 350
FG +PD VTF ++ G V +G+ L+ M N+ G+ P Y +IN L ++
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM-NARGMFPNAFTYSILINALCNENRL 398
Query: 351 KDAEEFVLRLP---VEPNHAIWGALV-GVCGLSKTD 382
A E + +L + P ++ ++ G C K +
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 184 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL----ILENSLV 239
+F M + G SP N L + + ++G+ LH + +++ ++ NSL+
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSS-----FAEKGK-LHFATALLLQSFEVEGCCMVVNSLL 178
Query: 240 SMYAKCGEIDDSYRIFSN----MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 295
+ K ++D+ ++F + D ++N +I GL G+A +AL + M FG
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238
Query: 296 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 355
PD VT+ ++ + ++K E+F + + P Y S+I+ +AGK+++A
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 356 FV---LRLPVEPNHAIWGALV 373
+ LRL + P + + LV
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLV 319
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 18/243 (7%)
Query: 93 GNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQV 147
G++ + D + SMI+GY +AG++ +A L D + +R + + ++ GY AG++
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM-LRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 148 FKACDL------FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 201
A ++ F PD + +TS+I GY + +++ L+ EM A G P T++
Sbjct: 329 LTAEEIRGKMISFGCFPD--VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 202 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 261
+L A+ + L + R+L G + N ++ + K G+++++ I M +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 262 ----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 317
DKI++ +I+G GR EA++++ M+ G PD +T +L+ AG+ +
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Query: 318 WEL 320
+ L
Sbjct: 507 YHL 509
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 53/305 (17%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQEL------FDTVPIRNKIAWTCMISGYLSAGQVFKACD 152
D ++ N +I G G+ EKA EL F P + + + +I G+ + ++ KA +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP--DIVTYNTLIQGFCKSNELNKASE 262
Query: 153 LFD-----SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 207
+F S+ D + +TSMISGY + + EA SL +M+ G P N TF VL
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--------- 258
+ ++ G + D++ SL+ Y + G++ +R++ M
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 259 --------------------------AYRDKIS----WNSMIMGLSDHGRASEALTVYET 288
A +D I +N +I G G+ +EA + E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 289 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 348
M + PD +TF ++ G + + +F+ MV + G P S+++ L +AG
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV-AIGCSPDKITVSSLLSCLLKAG 501
Query: 349 KVKDA 353
K+A
Sbjct: 502 MAKEA 506
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 144/336 (42%), Gaps = 58/336 (17%)
Query: 67 DGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQS----LNSMINGYVQAGQLEKAQEL 122
+ RL LV ++ G + +A+ L L +F+ + +NS++N V+ ++E A +L
Sbjct: 137 NNRLLGFLVSSFAEKGKLHFATALL---LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKL 193
Query: 123 FDT----VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWTSMISGYVQ 174
FD + + +I G G+ KA +L M + D + + ++I G+ +
Sbjct: 194 FDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK 253
Query: 175 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 234
+ + +A +F ++ + GSV D++
Sbjct: 254 SNELNKASEMFKDVKS-----------------GSVC-----------------SPDVVT 279
Query: 235 ENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIMGLSDHGRASEALTVYETML 290
S++S Y K G++ ++ + +M Y +++N ++ G + G A + M+
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 291 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV 350
FG +PD VTF ++ G V +G+ L+ M N+ G+ P Y +IN L ++
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM-NARGMFPNAFTYSILINALCNENRL 398
Query: 351 KDAEEFVLRLP---VEPNHAIWGALV-GVCGLSKTD 382
A E + +L + P ++ ++ G C K +
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 184 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL----ILENSLV 239
+F M + G SP N L + + ++G+ LH + +++ ++ NSL+
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSS-----FAEKGK-LHFATALLLQSFEVEGCCMVVNSLL 178
Query: 240 SMYAKCGEIDDSYRIFSN----MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 295
+ K ++D+ ++F + D ++N +I GL G+A +AL + M FG
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238
Query: 296 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 355
PD VT+ ++ + ++K E+F + + P Y S+I+ +AGK+++A
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 356 FV---LRLPVEPNHAIWGALV 373
+ LRL + P + + LV
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLV 319
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 13/270 (4%)
Query: 106 MINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR- 160
+I+G + G L+ A LF+ + I+ + I + +I G+ +AG+ L M R
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 161 ---DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 217
+ + ++ +I +V+ + EA L EMM G +P T+ L L++
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGL 273
Q+ + + + D++ N L++ Y K IDD +F M+ R + +++N+++ G
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 274 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 333
G+ A +++ M+ + PD V++ +L G ++K E+F + S ++
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS-KMELD 507
Query: 334 FDHYISIINLLGRAGKVKDAEEFVLRLPVE 363
Y+ II+ + A KV DA + LP++
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 166/372 (44%), Gaps = 43/372 (11%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISL--AYACAG-------LSFPYLGRQ 51
+I G +G + A LF +M + K + T+ +L + AG L + R+
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 52 LHAQLIVNGWKLDDY--DGRLRRS--LVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMI 107
+ ++ +D + +G+LR + L++ G+ A N + + NS+I
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI---APNTI----------TYNSLI 375
Query: 108 NGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR--- 160
+G+ + +LE+A ++ D + + + + + +I+GY A ++ +LF M R
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 161 -DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
+++ + +++ G+ Q+ + A LF EM++ P ++ +L + L++ ++
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 220 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSD 275
G K+ E D+ + ++ ++DD++ +F ++ + D ++N MI L
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD--KGWELFNSMVNSYGLQPG 333
S+A ++ M E G PD +T+ +L AH G D EL M S G
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTY-NILIR-AHLGDDDATTAAELIEEM-KSSGFPAD 612
Query: 334 FDHYISIINLLG 345
+IN+L
Sbjct: 613 VSTVKMVINMLS 624
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 132/326 (40%), Gaps = 18/326 (5%)
Query: 152 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 211
D+ S P I + + S + + ++L +M + G + T +++
Sbjct: 78 DMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCR 137
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK----ISWN 267
L G +K YE D ++ N+L++ + ++ + M I+ N
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 268 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 327
+++ GL +G+ S+A+ + + M+E G P+ VT+ VL +G EL M
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EE 256
Query: 328 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA---IWGALV-GVCGLSKTD- 382
++ Y II+ L + G + +A + ++ A + L+ G C + D
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 383 -ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 441
A + KR ++ P N L + + + E L KEM +G+ AP + I
Sbjct: 317 GAKLLRDMIKR--KISP-NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI--AP--NTI 369
Query: 442 LVKGRVHVFSSGDRLEPHVEDILLQI 467
+ F +RLE ++ + L I
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMI 395
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 140/295 (47%), Gaps = 18/295 (6%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDLFDSMP 158
S++ G+ + L A ++FD + N ++++ +I G G++ +A L D M
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 159 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 214
++ + +T +I LI +A +LF EM+ G P T+ VL + ++
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 215 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMI 270
+ + VK +I N+L++ Y K G + ++ + + M R + ++N ++
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
GL G+ +A+ + + ML+ GL PD V++ ++ G ++ ++L +SM N + +
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-NCFDI 472
Query: 331 QPGFDHYISIINLLGRAGKVKDAEEFV---LRLPVEPNHAIWGALV-GVCGLSKT 381
+P + +IIN + GK A F+ LR + + L+ GVC + KT
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 153/398 (38%), Gaps = 36/398 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G G EEA L QM +P+ T+ L A L ++I G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 61 WKLDDYDGRLRRSLVRMYSVF-------GLMDYASNALEGNLNNFDDQSL---NSMINGY 110
K + V Y+V G ++ A+ + + S+ N++INGY
Sbjct: 332 CKPN----------VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY 381
Query: 111 VQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DS 162
+ G++ A EL + R N + ++ G G+ +KA L M D D
Sbjct: 382 CKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
+++ +I G + + A L M P TF + A D G+
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 223 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI----SWNSMIMGLSDHGR 278
++ D + +L+ K G+ D+ I + + S N ++ LS +
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
E L + + + GL P VT+ ++ +G + + + M S G P Y
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS-GCLPNVYPYT 620
Query: 339 SIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV 373
IIN L + G+V++AE+ + + V PNH + +V
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 10/222 (4%)
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
++S++ + +L A + M A GF + + A+ Y +
Sbjct: 162 CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI 221
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-----DKISWNSMIMGLSDHGR 278
+K + D + SL+ + + + D+ ++F M+ + +S++ +I GL + GR
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
EA + + M E G P T T+ ++ A GL+DK + LF+ M+ G +P Y
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI-PRGCKPNVHTYT 340
Query: 339 SIINLLGRAGKVKDAEEFVLRL---PVEPNHAIWGALV-GVC 376
+I+ L R GK+++A ++ + P+ + AL+ G C
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 13/183 (7%)
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 267
G L+ R +H + + D+ N+++ MY+ C +DD+ ++F M WN
Sbjct: 130 GKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMP-----EWN 184
Query: 268 S-----MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
S M+ ++G EA+ ++ E G P+ F V + C G V +G F
Sbjct: 185 SGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQ 244
Query: 323 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 382
+M YG+ P +HY S+ +L +G + +A FV R+P+EP+ +W L+ LS+
Sbjct: 245 AMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLM---NLSRVH 301
Query: 383 ADV 385
DV
Sbjct: 302 GDV 304
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 143/303 (47%), Gaps = 19/303 (6%)
Query: 104 NSMINGYVQAGQLEKAQELF-DTVPIR---NKIAWTCMISGYLSAGQVFKACDLFDSMP- 158
+++NG + + A L D + + N I ++ ++ ++ G+V +A +LF+ M
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 159 ---DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
D D + ++S+I+G ++ I EA +F M++ G ++ L ++
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY----RDKISWNSMIM 271
G +L + + + N+L+ + + G++D + FS M + D ++N ++
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
GL D+G +AL ++E M + + D VT+ V+ G V++ W LF S+ + GL+
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLK 467
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 391
P Y ++++ L G + + E ++ E G + C LS D +++ K
Sbjct: 468 PDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE------GLMKNDCTLSDGDITLSAELIK 521
Query: 392 RLL 394
++L
Sbjct: 522 KML 524
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ----GRQLHGMQVKTIYEYDLILE 235
+AI LF +M+ P F L A+ + D G+++ + ++ DL
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN----DLYTF 123
Query: 236 NSLVSMYAKCGEIDDSYRIFSNM---AYR-DKISWNSMIMGLSDHGRASEALTVYETMLE 291
N +++ + C ++ + I M Y D+++ S++ G R S+A+++ + M+E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 292 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 351
G PD V + ++ + V+ ++ F + G++P Y +++N L + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 352 DAEEFV---LRLPVEPNHAIWGALV 373
DA + ++ + PN + AL+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALL 267
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 154/346 (44%), Gaps = 22/346 (6%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 159
+++I+ + G ++ A LF + + + + + ++ G AG+ L M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 160 RD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
R+ I + ++ +V+ + EA L+ EM+ G SP T+ L L +
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 271
+ + V+ D++ SL+ Y +DD ++F N++ R + ++++ ++
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
G G+ A +++ M+ G+ PD +T+ +L G ++K E+F + S +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-KMD 470
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDADVASR 388
G Y +II + + GKV+DA LP V+PN + ++ GL K + +
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS--GLCKKGSLSEAN 528
Query: 389 ATKRLLELDPLNAPGHVALCNIYAANDRHIELTS---LRKEMRIKG 431
R +E D NAP + A+ R +LT+ L +EM+ G
Sbjct: 529 ILLRKMEEDG-NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 123/259 (47%), Gaps = 15/259 (5%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNK-----IAWTCMISGYLSAGQVFKACDLFDSMP 158
N++++GY +L +A + D + +RNK + +T +I GY +V +F ++
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 159 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 214
R +++ ++ ++ G+ Q+ I A LF EM++HG P T+ +L + L+
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 215 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMI 270
+ ++ K+ + +++ +++ K G+++D++ +F ++ + + +++ MI
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
GL G SEA + M E G P+ T+ ++ A G + +L M S G
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM-KSCGF 574
Query: 331 QPGFDHYISIINLLGRAGK 349
+I++L A K
Sbjct: 575 SADASSIKMVIDMLLSAMK 593
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 38/316 (12%)
Query: 136 CMISGYLSAGQVFKACDL-FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 194
C IS + F +C+ F S+ + + + SG V + +AI+LF EM+
Sbjct: 33 CTISSF------FSSCERDFSSISNGNVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPL 85
Query: 195 PLNGTFAVLFGAMGSVA----YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 250
P F+ F A+ LD +QL + +++ N +++ + +C +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI----AHNIYTLNIMINCFCRCCKTCF 141
Query: 251 SYRIFSN---MAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 306
+Y + + Y D ++N++I GL G+ SEA+ + + M+E G PD VT+ ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 307 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VE 363
+G +L M ++ Y +II+ L R G + A + ++
Sbjct: 202 GICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 364 PNHAIWGALV-GVCGLSKTD------ADVASRATKRLLELDPLNAPGHVALCNIYAANDR 416
+ + +LV G+C K + D+ SR E+ P N L +++ +
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR------EIVP-NVITFNVLLDVFVKEGK 313
Query: 417 HIELTSLRKEMRIKGV 432
E L KEM +G+
Sbjct: 314 LQEANELYKEMITRGI 329
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 182/418 (43%), Gaps = 38/418 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ G+ + EA+ L QM ++ +PN TF +L + + L +++ G
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 61 WKLDDYDGRLRRSLVRMYSVF--GLMDYASNALEGNLNNFDDQS--------LNSMINGY 110
+ D + Y V GL L NL N +Q N++I+G
Sbjct: 217 CQPD----------LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 111 VQAGQLEKAQELF---DTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DS 162
+ ++ A LF +T IR N + ++ +IS + G+ A L M +R D
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
++++I +V+ + EA L+ EM+ P T++ L LD+ +Q+
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 223 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGR 278
V D++ N+L+ + K +++ +F M+ R + +++N +I GL G
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 279 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 338
A +++ M+ G+ P+ +T+ +L G ++K +F + S ++P Y
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYN 505
Query: 339 SIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGL-SKTDADVASRATK 391
+I + +AGKV+D + L V+P+ + ++ G C SK +AD + K
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 109/229 (47%), Gaps = 11/229 (4%)
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 222
+ +S+++GY ++ I+EA++L +M G+ P TF L + + L
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 223 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS-----WNSMIMGLSDHG 277
V + DL+ +V+ K G+ D ++ + + M + K+ +N++I GL +
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME-QGKLEPGVLIYNTIIDGLCKYK 270
Query: 278 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 337
+AL +++ M G+ P+ VT+ +++ + G L + M+ + P +
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTF 329
Query: 338 ISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV-GVCGLSKTD 382
++I+ + GK+ +AE+ +++ ++P+ + +L+ G C + D
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 134/322 (41%), Gaps = 51/322 (15%)
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ----GRQLH--------------- 220
+A++LFGEM+ P F+ L A+ + D G Q+
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 221 ----------------GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM---AYR 261
G +K YE +++ +SL++ Y I ++ + M Y+
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 262 -DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
+ +++N++I GL H +ASEA+ + + M+ G PD VT+ V+ G D + L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCG 377
N M L+PG Y +II+ L + + DA + + PN + +L+ C
Sbjct: 244 LNKMEQG-KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS-CL 301
Query: 378 LSKTDADVASRATKRLLE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 435
+ ASR ++E ++P + AL + + + +E L EM V+++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINP-DVFTFSALIDAFVKEGKLVEAEKLYDEM----VKRS 356
Query: 436 PGCSWILVKGRVHVFSSGDRLE 457
S + ++ F DRL+
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLD 378
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFDS 156
+ N++++G + G+LEKA +F+ + R+K+ + MI G AG+V DLF +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 157 MPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 206
+ + D +A+ +MISG+ + EA +LF EM G P +G + L A
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 178/402 (44%), Gaps = 44/402 (10%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ G NG +A+LL +M + +PN T+ + L +L ++
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 61 WKLDDYDGRLRRSLVRMYSVF--GLMDYASNALEGNLNNFDDQSLN----------SMIN 108
KLD YS+ GL S L+ N F++ + ++I
Sbjct: 243 IKLDAVK----------YSIIIDGLCKDGS--LDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 109 GYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFDSMPDR--- 160
G+ AG+ + +L + I+ KI A++ +I ++ G++ +A +L M R
Sbjct: 291 GFCYAGRWDDGAKLLRDM-IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 161 -DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
D++ +TS+I G+ + + +A + M++ G P TF +L +D G +L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 220 -HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLS 274
M ++ + D + N+L+ + + G+++ + +F M R D +S+ ++ GL
Sbjct: 410 FRKMSLRGVVA-DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 275 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 334
D+G +AL ++E + + + D + ++ +A VD W+LF S+ G++P
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPDV 527
Query: 335 DHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 373
Y +I L + G + +A+ ++ + PN + L+
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 101/230 (43%), Gaps = 9/230 (3%)
Query: 161 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 220
D++ ++++I+G ++EA+ L M+ G P T L + + L
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 221 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDH 276
V+T ++ + + ++ + K G+ + + M R D + ++ +I GL
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 277 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 336
G A ++ M G D + + ++ +AG D G +L M+ + P
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVA 319
Query: 337 YISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV-GVCGLSKTD 382
+ ++I+ + GK+++AEE +++ + P+ + +L+ G C ++ D
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 180 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL-HGMQVKTIYEYDLILENSL 238
+A+ LF EM P F+ LF + D L M++K I ++L + +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI-AHNLYTLSIM 113
Query: 239 VSMYAKCGEIDDSYRIFSN---MAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGL 294
++ +C ++ ++ + Y D ++++++I GL GR SEAL + + M+E G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 295 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 354
P +T ++ G V L + MV + G QP Y ++ ++ ++G+ A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 355 EFVLRL 360
E + ++
Sbjct: 233 ELLRKM 238
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 129/285 (45%), Gaps = 18/285 (6%)
Query: 105 SMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 159
S+I + +L +A+E F + IR + + +T +I G+ G + A F M
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 160 RD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
RD + +T++ISG+ Q + EA LF EM G P + TF L ++
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIM 271
++H ++ +++ +L+ K G++D + + M + ++NS++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
GL G EA+ + GL DTVT+ ++ A +G +DK E+ M+ GLQ
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQ 558
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFV---LRLPVEPNHAIWGALV 373
P + ++N G ++D E+ + L + PN + +LV
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 99 DDQSLNSMINGYVQAGQLEKA----QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLF 154
D + +INGY +AG ++ A + N + +T +I G G + A +L
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 155 DSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
M + + S+++G ++ I EA+ L GE A G + T+ L A
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 266
+D+ +++ + + ++ N L++ + G ++D ++ + M + + ++
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
NS++ A +Y+ M G+ PD T+ ++ A + + W LF M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM-K 658
Query: 327 SYGLQPGFDHYISIINLLGRAGKVKDAEE 355
G Y +I + K +A E
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 129/285 (45%), Gaps = 18/285 (6%)
Query: 105 SMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 159
S+I + +L +A+E F + IR + + +T +I G+ G + A F M
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 160 RD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
RD + +T++ISG+ Q + EA LF EM G P + TF L ++
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIM 271
++H ++ +++ +L+ K G++D + + M + ++NS++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
GL G EA+ + GL DTVT+ ++ A +G +DK E+ M+ GLQ
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQ 558
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFV---LRLPVEPNHAIWGALV 373
P + ++N G ++D E+ + L + PN + +LV
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 99 DDQSLNSMINGYVQAGQLEKA----QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLF 154
D + +INGY +AG ++ A + N + +T +I G G + A +L
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 155 DSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
M + + S+++G ++ I EA+ L GE A G + T+ L A
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 266
+D+ +++ + + ++ N L++ + G ++D ++ + M + + ++
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
NS++ A +Y+ M G+ PD T+ ++ A + + W LF M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM-K 658
Query: 327 SYGLQPGFDHYISIINLLGRAGKVKDAEE 355
G Y +I + K +A E
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 123/255 (48%), Gaps = 12/255 (4%)
Query: 132 IAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGE 187
+ + +I+G+ +VF A DL M + D + + ++I G + L+ +A+ LF
Sbjct: 140 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 199
Query: 188 MMAHGFSPLNGTF-AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 246
M G T+ +++ G S + D R + M ++ I ++I +++ ++ K G
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP-NVITFTAVIDVFVKEG 258
Query: 247 EIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFL 302
+ ++ +++ M R D ++NS+I GL HGR EA + + M+ G PD VT+
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYN 318
Query: 303 GVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV 362
++ + VD+G +LF M GL Y +II +AG+ A+E R+
Sbjct: 319 TLINGFCKSKRVDEGTKLFREMAQR-GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Query: 363 EPNHAIWGALV-GVC 376
PN + L+ G+C
Sbjct: 378 RPNIRTYSILLYGLC 392
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 126/287 (43%), Gaps = 45/287 (15%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVP---IR-NKIAWTCMISGYLSAGQVFKACDLFDSMPD 159
N++I+G + G + A ELFD + +R + + + +++G +G+ A L M
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 160 RD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
RD I +T++I +V+ +EA+ L+ EM P T+ L + +D+
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 271
+Q+ + V D++ N+L++ + K +D+ ++F MA R D I++N++I
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 272 GLSDHG--------------------------------RASEALTVYETMLEFGLYPDTV 299
G G R +AL ++E M + + D
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 346
T+ V+ G V+ W+LF S+ + GL+P Y ++I+ R
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSL-SCKGLKPDVVSYTTMISGFCR 463
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 111/280 (39%), Gaps = 49/280 (17%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELF------DTVPIRNKIAWTCMISGYLSAGQVFKACD 152
D + NS++ G +G+ A L D VP N I +T +I ++ G+ +A
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP--NVITFTAVIDVFVKEGKFSEAMK 265
Query: 153 LFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMG 208
L++ M R D + S+I+G + + EA + M+ G P T+ L
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 209 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI-SWN 267
+D+G +L + D I N+++ Y + G D + IFS M R I +++
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYS 385
Query: 268 SMIMGLSDHGRASEALTVYETM----LEF------------------------------- 292
++ GL + R +AL ++E M +E
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445
Query: 293 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 332
GL PD V++ +++ DK L+ M GL P
Sbjct: 446 GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED-GLLP 484
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 127/308 (41%), Gaps = 50/308 (16%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ G +G + +A L M + D PN TF ++ +L+ ++
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT--- 271
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNN---FDDQSLNSMINGYVQAGQLE 117
+ D D SL+ + G +D A L+ + D + N++ING+ ++ +++
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 118 KAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI-AWTSMISGY 172
+ +LF + R + I + +I GY AG+ A ++F M R +I ++ ++ G
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGL 391
Query: 173 VQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL 232
N + +A+ LF M K+ E D+
Sbjct: 392 CMNWRVEKALVLFENMQ-----------------------------------KSEIELDI 416
Query: 233 ILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYET 288
N ++ K G ++D++ +F +++ + D +S+ +MI G + ++ +Y
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Query: 289 MLEFGLYP 296
M E GL P
Sbjct: 477 MQEDGLLP 484
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 134/297 (45%), Gaps = 18/297 (6%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRN----KIAWTCMISGYLSAGQVFKACDLF 154
D + N+++ +G+L++A E+ D + R+ I +T +I V A L
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 155 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
D M DR D + + +++G + + EAI +M + G P T ++ +M S
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 266
+L ++ + ++ N L++ + G + + I M + +S+
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
N ++ G + A+ E M+ G YPD VT+ +LTA G V+ E+ N + +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL-S 441
Query: 327 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL---PVEPNHAIWGALVGVCGLSK 380
S G P Y ++I+ L +AGK A + + + ++P+ + +LVG GLS+
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG--GLSR 496
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 132 IAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGE 187
+ + +I+ G + +A D+ + MP +S+++ ++ G+ + + + AI
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 188 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 247
M++ G P T+ + A+ ++ ++ LI N+++ AK G+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 248 IDDSYRIFSNMAYRD----KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 303
+ ++ M +D I+++S++ GLS G+ EA+ + G+ P+ VTF
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 304 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
++ + D+ + M+N G +P Y +I L G K+A E + L
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 115/238 (48%), Gaps = 14/238 (5%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 157
+ N +IN + G L +A ++ + +P N +++ ++ G+ ++ +A + + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 158 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
R D + + +M++ ++ + +A+ + ++ + G SP+ T+ + +
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 214 DQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF---SNMAYR-DKISWNS 268
+ + L M+ K + + D I +SLV ++ G++D++ + F M R + +++NS
Sbjct: 466 GKAIKLLDEMRAKDL-KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 269 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
+++GL + A+ M+ G P+ ++ ++ A+ G+ + EL N + N
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 194 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 253
S LNG A F + S Y + H V + + + + N+ + + GE+++ ++
Sbjct: 66 SGLNGR-AQKFETLSS-GYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFK 123
Query: 254 IFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 309
NM Y D I ++I G G+ +A + E + G PD +T+ +++
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 310 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
AG ++ + + M + P Y +I+ L +GK+K A E + R+
Sbjct: 184 KAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 183/430 (42%), Gaps = 41/430 (9%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISL---------AYACAGLSFPYLGRQ 51
++ G+ +A+ L QM +P+ TF +L A L + R
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 52 LHAQLIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYV 111
L+ G ++ G +R + + F L+ N +E D N++I+
Sbjct: 146 CQPNLVTYGVVVN---GLCKRGDIDL--AFNLL----NKMEAAKIEADVVIFNTIIDSLC 196
Query: 112 QAGQLEKAQELF---DTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSI 163
+ ++ A LF +T IR N + ++ +IS S G+ A L M ++ + +
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
+ ++I +V+ EA L +M+ P T+ L LD+ +Q+
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRA 279
V DL N+L+ + K ++D +F M++R D +++ ++I GL G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 280 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI- 338
A V++ M+ G+ PD +T+ +L + G ++K E+F+ M S + D YI
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS---EIKLDIYIY 433
Query: 339 -SIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGLSKTDADVASRATKRL 393
++I + +AGKV D + L V+PN + ++ G+C SK A K++
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC--SKRLLQEAYALLKKM 491
Query: 394 LELDPLNAPG 403
E PL G
Sbjct: 492 KEDGPLPDSG 501
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 115/233 (49%), Gaps = 12/233 (5%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIRNKI----AWTCMISGYLSAGQVFKACDLFDSMPD 159
NS+ING+ +L+KA+++F+ + ++ + +I G+ + +V +LF M
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 160 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
R D++ +T++I G + A +F +M++ G P T+++L + + L++
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 271
++ K+ + D+ + +++ K G++DD + +F +++ + + +++N+MI
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
GL EA + + M E G PD+ T+ ++ A G EL M
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 130/291 (44%), Gaps = 21/291 (7%)
Query: 104 NSMINGYVQAGQLEKAQELFDTV------PIRNKIAWTCMISGYLSAGQVFKACDLFDSM 157
N +IN + + Q+ A L + P + + + +++GY ++ A L D M
Sbjct: 49 NILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 158 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
+ D+I +T++I G + +EA++L M+ G P T+ V+ + +
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSM 269
D L E D+++ N+++ K +DD+ +F M + + ++++S+
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 329
I L +GR S+A + M+E + P+ VTF ++ A G + +L + M+
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-S 285
Query: 330 LQPGFDHYISIIN---LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVC 376
+ P Y S+IN + R K K EF++ P+ + L+ G C
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 267
G L + + +H ++ D+ NS++ MY+ CG ++D+ +F++M R+ +W
Sbjct: 192 GDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWC 251
Query: 268 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 327
+I + +G+ +A+ + + G PD F + AC G +++G F SM
Sbjct: 252 GVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKE 311
Query: 328 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD--V 385
YG+ P +HY+S++ +L G + +A FV + EPN +W L+ LS+ D +
Sbjct: 312 YGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLM---NLSRVHGDLIL 366
Query: 386 ASRATKRLLELDP--LNAPGHVALCNIYAAN 414
R + +LD LN L + +++
Sbjct: 367 GDRCQDMVEQLDASRLNKESKAGLVPVKSSD 397
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 109 GYVQAGQLEKAQELFDT--VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWT 166
G QA Q K F T V I + A+ +I Y G V A +F+SMP+R+ W
Sbjct: 192 GDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWC 251
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 226
+I + +N +AI F G P F +F A G + +++G + ++
Sbjct: 252 GVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGL----LHFES 307
Query: 227 IY-EYDLI--LEN--SLVSMYAKCGEIDDSYRIFSNM 258
+Y EY +I +E+ SLV M A+ G +D++ R +M
Sbjct: 308 MYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM 344
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 167/374 (44%), Gaps = 59/374 (15%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYAC--AGLSFPYLGRQLHAQLIV 58
+I + +G +EEA+ +F M +PN T+ ++ AC G+ F + + ++
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK-FFDEMQR 332
Query: 59 NGWKLDDYDGRLR-RSLVRMYSVFGLMDYASNALEGNLNNFDDQ---SLNSMINGYVQAG 114
NG + D R+ SL+ + S GL + A N + N +Q S N++++ + G
Sbjct: 333 NGVQPD----RITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 115 QLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWT 166
Q++ A E+ +P++ N ++++ +I G+ AG+ +A +LF M D +++
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 226
+++S Y + EA+ + EM + G
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGI--------------------------------- 475
Query: 227 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEA 282
+ D++ N+L+ Y K G+ D+ ++F+ M + ++++++I G S G EA
Sbjct: 476 --KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 283 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 342
+ ++ GL D V + ++ A GLV L + M G+ P Y SII+
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIID 592
Query: 343 LLGRAGKVKDAEEF 356
GR+ + + ++
Sbjct: 593 AFGRSATMDRSADY 606
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 20/270 (7%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVP---IR-NKIAWTCMISGYLSAGQVFK-ACDLFDS 156
+ +++I+ Y ++G E+A +F+++ +R N + + +I G FK FD
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 157 M------PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
M PDR I + S+++ + L A +LF EM ++ L A+
Sbjct: 330 MQRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 211 AYLDQGRQ-LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKIS 265
+D + L M VK I +++ ++++ +AK G D++ +F M Y D++S
Sbjct: 388 GQMDLAFEILAQMPVKRIMP-NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 266 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
+N+++ + GR+ EAL + M G+ D VT+ +L G D+ ++F M
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 326 NSYGLQPGFDHYISIINLLGRAGKVKDAEE 355
+ L P Y ++I+ + G K+A E
Sbjct: 507 REHVL-PNLLTYSTLIDGYSKGGLYKEAME 535
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 234 LENSLVSMYAKCGEIDDSYRIFSNM---AYRDKI-SWNSMIMGLSDHGRASEALTVYETM 289
L ++++S + G++ + RIF Y + + +++++I G EA++V+ +M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 290 LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 348
E+GL P+ VT+ V+ AC G+ K F + G+QP + S++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 41/281 (14%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTV----PIRNKIAWTCMISGYLSAGQVFKACDLFDSM 157
+ ++I+ Y++A ++ A ELF+T+ + N + ++ +I G+ AGQV KAC +F+ M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 158 ------PDRD--------------SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 197
PD D + + +++ G+ ++ + EA L M G P
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Query: 198 GTFAVLFGAMGSVAYLDQGRQL------HGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 251
+ L + V LD+ +++ HG T+Y Y +SL+ Y K D +
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA-TLYTY-----SSLIDRYFKVKRQDLA 728
Query: 252 YRIFSNM----AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 307
++ S M + + + MI GL G+ EA + + M E G P+ VT+ ++
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 308 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 348
G ++ EL M S G+ P + Y +I+ + G
Sbjct: 789 FGMIGKIETCLELLERM-GSKGVAPNYVTYRVLIDHCCKNG 828
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 174/429 (40%), Gaps = 92/429 (21%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G +EEA+ +M + PN T+ +L C +QL
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN------KKQL-------- 353
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
GR +R L M +EG + + NS+++ Y +G A
Sbjct: 354 -------GRCKRVLNMM------------MMEGCYPS--PKIFNSLVHAYCTSGDHSYAY 392
Query: 121 ELFDTV----PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMIS-GYVQN 175
+L + + + + +I G + + CDL D A++ M++ G V N
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILI-GSICGDKDSLNCDLLDLAEK----AYSEMLAAGVVLN 447
Query: 176 EL--------------IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS-----VAYLDQG 216
++ +A S+ EM+ GF P T++ + + + +A+L
Sbjct: 448 KINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Query: 217 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIMG 272
G V +Y Y +++++ + K G I+ + + F+ M + +++ ++I
Sbjct: 508 EMKRGGLVADVYTYTIMVDS-----FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL-- 330
+ S A ++ETML G P+ VT+ ++ AG V+K ++F M S +
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Query: 331 -------------QPGFDHYISIINLLGRAGKVKDAEEFVLRLPV---EPNHAIWGALV- 373
+P Y ++++ ++ +V++A + + + + EPN ++ AL+
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 374 GVCGLSKTD 382
G+C + K D
Sbjct: 683 GLCKVGKLD 691
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 16/288 (5%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLFDSM 157
+ N +I G ++A +E AQ++F V I + + ++ Y +G++ + +L+ M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 158 P----DRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAY 212
+ ++I +ISG V+ + +A+ L+ ++M+ FSP T+ L +
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNS 268
L + +QL + + + N L++ + K GE D + +F M D +++
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 269 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 328
++ L GR E L ++ + E GL PD V + ++ + +++ LFN M S
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 329 GLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV 373
G+ P Y S+I LG AG V++A + + R +EPN + AL+
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 20/256 (7%)
Query: 132 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSI----AWTSMISGYVQNELIAEAISLFGE 187
+ +T ++ AG +A D D M D+ + + ++I G ++ + +A+ LFG
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 188 MMAHGFSPLNGTFAVL---FGAMG-SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA 243
M + G P T+ V +G G SV+ L+ M+ K I + SL S+ A
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALET---FEKMKTKGIAPNIVACNASLYSL-A 479
Query: 244 KCGEIDDSYRIFSNMA----YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 299
K G ++ +IF + D +++N M+ S G EA+ + M+E G PD +
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 300 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF--- 356
++ A VD+ W++F M L+P Y +++ LG+ GK+++A E
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRM-KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 357 VLRLPVEPNHAIWGAL 372
+++ PN + L
Sbjct: 599 MVQKGCPPNTITFNTL 614
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 135/290 (46%), Gaps = 17/290 (5%)
Query: 101 QSLNSMINGYVQAGQLEKAQELF---DTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDS 156
+ N++I G ++ +L+ A ELF +++ ++ + I Y +G A + F+
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 157 MPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
M + + +A + + + EA +F + G P + T+ ++ V
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD----KISWNS 268
+D+ +L ++ E D+I+ NSL++ K +D+++++F M +++N+
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 269 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 328
++ GL +G+ EA+ ++E M++ G P+T+TF + V ++ M++
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD-M 637
Query: 329 GLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 378
G P Y +II L + G+VK+A F ++ ++ V +C L
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM----KKLVYPDFVTLCTL 683
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 158/412 (38%), Gaps = 61/412 (14%)
Query: 102 SLNSMINGYVQAGQLEKAQELF----DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 157
+ N+ + +AG+ +A+++F D + + + + M+ Y G++ +A L M
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 158 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
+ D I S+I+ + + + EA +F M P T+ L +G +
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSM 269
+ +L V+ + I N+L K E+ + ++ M D ++N++
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 329
I GL +G+ EA+ + M + +YPD VT +L A L++ +++ + + +
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCA 708
Query: 330 LQP----------------GFDHYISIINLLGRAGKVKDA-------------------- 353
QP G D+ +S L G +D
Sbjct: 709 DQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGA 768
Query: 354 ----EEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVA--- 406
E+F L V+P + L+G GL +AD+ A L++ VA
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIG--GL--LEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 407 -LCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 457
L + Y + + EL L KEM I++ G V + D L+
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 106 MINGYVQAGQLEKAQELFDTV------PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 159
+I+G ++G+L +A++LF+ + P N + +I+G+ AG+ AC LF M
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRP--NCAIYNILINGFGKAGEADAACALFKRMVK 954
Query: 160 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
D ++ ++ + E + F E+ G +P + ++ +G L++
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 216 GRQL-HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMI 270
L + M+ DL NSL+ G ++++ +I++ + + ++N++I
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTF 301
G S G+ A VY+TM+ G P+T T+
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 134/285 (47%), Gaps = 16/285 (5%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 159
NS+I G+ A L + R N + ++ +I ++ G++ +A L+D M
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 160 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
R D ++S+I+G+ ++ + EA +F M++ P T+ L +++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 271
G +L + + + N+L+ + G+ D + +IF M D I+++ ++
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
GL +G+ +AL V+E + + + PD T+ ++ AG V+ GW+LF S+ + G++
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVK 532
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 373
P Y ++I+ R G ++A+ + + PN + L+
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 137/304 (45%), Gaps = 21/304 (6%)
Query: 97 NFDDQSLNSMINGYVQAGQLEKAQELFDTV------PIRNKIAWTCMISGYLSAGQVFKA 150
++D S N +IN + + QL A + + P + + + +++GY ++ +A
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP--DIVTLSSLLNGYCHGKRISEA 169
Query: 151 CDLFDSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 206
L D M +++ + ++I G + +EA++L M+A G P T+ +
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 207 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----D 262
+ +D L K E D+++ +++ ++D+ +F+ M + +
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 263 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
+++NS+I L ++GR S+A + M+E + P+ VTF ++ A G + + +L++
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 323 SMVNSYGLQPGFDHYISIIN---LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGL 378
M+ + P Y S+IN + R + K E ++ PN + L+ G C
Sbjct: 350 EMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 379 SKTD 382
+ +
Sbjct: 409 KRVE 412
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 122/293 (41%), Gaps = 20/293 (6%)
Query: 150 ACDLFDSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 205
A DLF M P + + ++S + ISL M S ++ +L
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 206 AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM---AYR- 261
+ L + G +K YE D++ +SL++ Y I ++ + M Y+
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 262 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 321
+ +++N++I GL H +ASEA+ + + M+ G PD T+ V+ G +D L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 322 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCG 377
M ++ Y +II+ L V DA + + PN + +L+ +C
Sbjct: 244 KKMEKG-KIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 378 LSK-TDADVASRATKRLLE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEM 427
+ +D ASR ++E ++P N AL + + + +E L EM
Sbjct: 303 YGRWSD---ASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 106 MINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFDSMPDR 160
+++G + G+LEKA +F+ + ++K+ + MI G AG+V DLF S+ +
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQ-KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 161 ----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 206
+ I +T+MISG+ + L EA +LF EM G P +GT+ L A
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 124/273 (45%), Gaps = 22/273 (8%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
D + NSMI G+ + + + A+ +FD + + + + +I Y A +V + L +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 159 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 214
R ++ + ++I G+ + + + A LF EM++HG P T +L L+
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 215 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMI 270
+ +L + + + D + N ++ K ++D+++ +F ++ D ++N MI
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 330
G S+A ++ M + G PD T+ ++ C AG +DK EL + M ++
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN--- 636
Query: 331 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 363
GF G A +K AEE + R+ E
Sbjct: 637 --GFS---------GDAFTIKMAEEIICRVSDE 658
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 182/487 (37%), Gaps = 103/487 (21%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN- 59
+ G GF E A+ LF QM P TF +L GL GR L A +VN
Sbjct: 198 LFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLI---NGLCLE--GRVLEAAALVNK 251
Query: 60 ----GWKLDDYD-GRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG 114
G +D G + + +M ++ S E ++ D +++I+ + G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP-DVVIYSAIIDRLCKDG 310
Query: 115 QLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWT 166
AQ LF + + N + CMI G+ S G+ A L M +R D + +
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 226
++IS V+ + EA L EM+ P
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFP------------------------------- 399
Query: 227 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 286
D + NS++ + K DD+ +F MA D +++N++I R E + +
Sbjct: 400 ----DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 287 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP----------GFDH 336
+ GL +T T+ ++ ++ +LF M+ S+G+ P GF
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYGFCE 514
Query: 337 -------------------------YISIINLLGRAGKVKDAEEFVLRLP---VEPNHAI 368
Y II+ + + KV +A + LP VEP+
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 369 WGALV-GVCGLSK-TDADVASRATKRLLELDPLNAPGHVAL--CNIYAANDRHIELTSLR 424
+ ++ G CG S +DA+V K +P N+ + + C D+ IEL S
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAGEIDKSIELIS-- 631
Query: 425 KEMRIKG 431
EMR G
Sbjct: 632 -EMRSNG 637
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 129/310 (41%), Gaps = 32/310 (10%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMP- 158
N +I +V+ + + A L+ + IR N ++ +I + ++ + F +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 159 ---DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF---------------SPLNGTF 200
D + + +++ G + I+EA++LFG M+ GF +P+ TF
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
L + + + L V D++ ++V+ K G+ + + S M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 261 R----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
D + ++++I L G S+A ++ MLE G+ P+ T+ ++ G
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV 373
L M+ + P + ++I+ + GK+ +AE+ +L + P+ + +++
Sbjct: 350 AQRLLRDMIER-EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 374 -GVCGLSKTD 382
G C ++ D
Sbjct: 409 YGFCKHNRFD 418
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 104 NSMINGYVQAGQLEKAQELF------DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 157
NS+ING+ +L++AQ++F D +P + + + +I+G+ A +V +LF M
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLP--DVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 158 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
R +++ +T++I G+ Q A +F +M++ G P T+ L + L
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSM 269
++ + K+ E D+ N + K G+++D + +F +++ + D I++N+M
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
I G G EA T++ M E G PD+ T+ ++ A G EL M
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
+LNS++NG+ ++ +A L D + + GY D
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQM----------VEMGY-----------------QPD 169
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 221
++ +T+++ G Q+ +EA++L M+ G P T+ + + D L
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHG 277
K E D+++ ++++ K +DD+ +F+ M + D +++S+I L ++G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 278 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 337
R S+A + MLE + P+ VTF ++ A A G + + +LF+ M+ + P Y
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTY 348
Query: 338 ISIINLLGRAGKVKDAEE-FVLRLPVE--PNHAIWGALV-GVCGLSKT 381
S+IN ++ +A++ F L + + P+ + L+ G C K
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 169/396 (42%), Gaps = 25/396 (6%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ GF EA+ L QM +P+ TF +L + + L +++V G
Sbjct: 141 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Query: 61 WKLDDYD-GRLRRSLVRMYSVFGLMDYASNAL---EGNLNNFDDQSLNSMINGYVQAGQL 116
+ D G + L + G D A N L E D +++I+ + +
Sbjct: 201 CQPDLVTYGAVINGLCKR----GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 117 EKAQELF---DTVPIRNKI-AWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSM 168
+ A LF D IR + ++ +IS + G+ A L M +R + + + S+
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 169 ISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIY 228
I + + + EA LF EM+ P T+ L LD+ +Q+ + V
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 229 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALT 284
D++ N+L++ + K ++ D +F +M+ R + +++ ++I G A
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 285 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 344
V++ M+ G++P+ +T+ +L G ++K +F + S ++P Y + +
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSEGM 495
Query: 345 GRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVC 376
+AGKV+D + L V+P+ + ++ G C
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 137/322 (42%), Gaps = 20/322 (6%)
Query: 149 KACDLFDSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
+A DLF M P + ++ ++S + + IS +M G S T+ ++
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA---YR 261
+ + L + G +K Y ++ NSL++ + I ++ + M Y+
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 262 -DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
D +++ +++ GL H +ASEA+ + E M+ G PD VT+ V+ G D L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCG 377
N M ++ Y ++I+ L + V DA + + P+ + +L+ C
Sbjct: 228 LNKMEKG-KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS-CL 285
Query: 378 LSKTDADVASRATKRLLE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 435
+ ASR +LE ++P N +L + +A + IE L EM ++++
Sbjct: 286 CNYGRWSDASRLLSDMLERKINP-NVVTFNSLIDAFAKEGKLIEAEKLFDEM----IQRS 340
Query: 436 PGCSWILVKGRVHVFSSGDRLE 457
+ + ++ F DRL+
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLD 362
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 154/319 (48%), Gaps = 23/319 (7%)
Query: 81 FGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTC 136
FG +D A L ++ D S N++++GY++ G+ +A LFD + + + +
Sbjct: 356 FGRIDDARELL-SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 137 MISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHG 192
+I G +G + A L + M + D I +T+++ G+V+N ++ A ++ EM+ G
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 193 FSPLNGTFAVLFGAMGSVAYLDQGR--QLHGMQVKTIYEY-DLILENSLVSMYAKCGE-- 247
P +A A+G + D + +LH V T + DL + N + K G
Sbjct: 475 IKP--DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 248 --IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 305
I+ +IF D +++ ++I G ++G+ A +Y+ ML LYP +T+ ++
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 306 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE-- 363
A AG +++ ++ +++ + G++P + +++ + +AG + +A ++ ++ E
Sbjct: 593 YGHAKAGRLEQAFQ-YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Query: 364 -PNHAIWGALVGV-CGLSK 380
PN + L+ C K
Sbjct: 652 PPNKYSYTMLISKNCDFEK 670
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 132/319 (41%), Gaps = 48/319 (15%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRN----KIAWTCMISGYLSAGQVFKACDLFDSM 157
+ N+M++ +AG LE+ +++ + RN ++ + +I+G+ G++ +A M
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 158 PDRDSIAWTS-----MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
R A T +I GY + L +A + EM+ G P T+ + A+
Sbjct: 300 -RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 213 LDQGRQL----------------HG-MQVKTIYEYDLILE--------------NSLVSM 241
+D R+L HG +++ E L+ + N+L+
Sbjct: 359 IDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 418
Query: 242 YAKCGEIDDSYRIFSNMA----YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 297
+ G ++ + R+ M + D I++ +++ G +G S A VY+ ML G+ PD
Sbjct: 419 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Query: 298 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF- 356
+ G DK + L MV + P Y I+ L + G + A EF
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQ 538
Query: 357 --VLRLPVEPNHAIWGALV 373
+ R+ + P+H + ++
Sbjct: 539 RKIFRVGLVPDHVTYTTVI 557
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 50/248 (20%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFDS 156
+ +++ G+V+ G L A E++D + +R I A+T G L G KA L +
Sbjct: 446 TYTTLVKGFVKNGNLSMATEVYDEM-LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEE 504
Query: 157 M-------PD---------------------------------RDSIAWTSMISGYVQNE 176
M PD D + +T++I GY++N
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 177 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN 236
A +L+ EM+ P T+ VL L+Q Q K +++ N
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 237 SLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEF 292
+L+ K G ID++YR M +K S+ +I D + E + +Y+ ML+
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Query: 293 GLYPDTVT 300
+ PD T
Sbjct: 685 EIEPDGYT 692
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 9/230 (3%)
Query: 161 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 220
D ++T +I + + ++ A+S+ G+MM G+ P TF L V + L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 221 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDH 276
+ VK+ YE ++++ N+L+ K GE++ + + + M + D +++N+++ GL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 277 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 336
GR S+A + M++ + PD VTF ++ G +D+ EL+ M+ S + P
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVT 283
Query: 337 YISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV-GVCGLSKTD 382
Y SIIN L G++ DA++ + + PN + L+ G C D
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 13/277 (4%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 154
D + N+++ G +G+ A + + R + + +T +I ++ G + +A +L+
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 155 DSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
M D +++ + S+I+G + + +A F M + G P T+ L
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 266
+D+G +L + D+ N+L+ Y + G++ + IF M R D I+
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 267 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 326
++ GL +G AL ++ M E Y V + ++ A V+K WELF +
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449
Query: 327 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 363
G++P Y +I L + G ++A+E + R+ E
Sbjct: 450 E-GVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 163 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF-AVLFGAMGSVAYLDQGRQLHG 221
+ + ++I G +N + A+ L EM G T+ +L G S + D R L
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 222 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHG 277
M ++I D++ +L+ ++ K G +D++ ++ M + +++NS+I GL HG
Sbjct: 237 MMKRSINP-DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 278 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 337
R +A ++ M G +P+ VT+ +++ +VD+G +LF M + G Y
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM-SCEGFNADIFTY 354
Query: 338 ISIINLLGRAGKVKDA 353
++I+ + GK++ A
Sbjct: 355 NTLIHGYCQVGKLRVA 370
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 9/228 (3%)
Query: 141 YLSAGQVFKACDLFDSMPDRDSI----AWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 196
+L+ G +KA ++++SM DS+ + +I ++ + A LF +M P
Sbjct: 288 FLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPS 347
Query: 197 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 256
F+ L +MG LD +++ + + SL+ YAK G++D + R++
Sbjct: 348 FSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWD 407
Query: 257 NM---AYRDKISWNSMIM-GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 312
M +R +MI+ + G+ A+TV++ M + G P T+ +L A +G
Sbjct: 408 EMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSG 467
Query: 313 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
VD +++NSM N+ GL+PG YIS++ LL V A + +L +
Sbjct: 468 QVDSAMKIYNSMTNA-GLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 15/241 (6%)
Query: 157 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 216
MPD ++ ++I G+ + + + +A+ L EM G S T+ +L A +D+
Sbjct: 174 MPD--VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 217 RQ-LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK----ISWNSMIM 271
L M+ + E DL++ SL+ + CGE+D +F + R I++N++I
Sbjct: 232 MGFLKEMKFMGL-EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
G G+ EA ++E M+E G+ P+ T+ G++ G + +L N M+ +
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK-DEE 349
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFV---LRLPVEPNHAIWGALV-GVCGLSKTDADVAS 387
P Y IIN L + G V DA E V + P++ + L+ G+C +K D D AS
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC--AKGDLDEAS 407
Query: 388 R 388
+
Sbjct: 408 K 408
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 137/301 (45%), Gaps = 41/301 (13%)
Query: 73 SLVRMYSVFGLMDYASNALEGNLNNFDDQ---SLNSMINGYVQAGQLEKAQELFDTVPIR 129
SL+R + G +D + L D + N++I G+ + GQL++A E+F+ + R
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 130 ----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRD----SIAWTSMISGYVQNELIAEA 181
N +T +I G G+ +A L + M ++D ++ + +I+ ++ L+A+A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 182 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 241
+ + M P N T+ +L G + + LD+ +L + +K
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK---------------- 415
Query: 242 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 301
D SY D IS+N++I GL R +AL +Y+ ++E D VT
Sbjct: 416 -------DSSY------TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 302 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 361
+L + AG V+K EL+ + +S ++ D Y ++I+ + G + A+ + ++
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNS-DTYTAMIDGFCKTGMLNVAKGLLCKMR 521
Query: 362 V 362
V
Sbjct: 522 V 522
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 155/385 (40%), Gaps = 72/385 (18%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETF-ISLAYACAGLSFPYLGRQLHAQLIVN 59
+I G G +EAL L M D +PN T+ I + C G A IV
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD------GLVADAVEIVE 376
Query: 60 GWKLDDYDGRLRRSLVRMYSVF-------GLMDYASNAL-----EGNLNNFDDQSLNSMI 107
K R R Y++ G +D AS L + + + D S N++I
Sbjct: 377 LMK-----KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 108 NGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD---- 159
+G + +L +A +++D + + +++ +++ L AG V KA +L+ + D
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 160 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 219
R+S +T+MI G+ + ++ A L +M P
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP------------------------ 527
Query: 220 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSMIMGLSD 275
++++Y N L+S K G +D ++R+F M + D +S+N MI G
Sbjct: 528 ------SVFDY-----NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 276 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 335
G A ++ M GL PD T+ ++ G +D+ F+ MV+S G +P
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS-GFEPDAH 635
Query: 336 HYISIINLLGRAGKVKDAEEFVLRL 360
S++ G+ E V +L
Sbjct: 636 ICDSVLKYCISQGETDKLTELVKKL 660
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 119/265 (44%), Gaps = 13/265 (4%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 157
S N++I G+ + +LEKA EL + + + + W +I + AG++ +A M
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 158 P----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
+ D + +TS+I G+ + +LF E++ G SP T+ L + L
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK----ISWNSM 269
+ ++ ++ ++ L+ G+ ++ ++ + M +D+ +++N +
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV-NSY 328
I L G ++A+ + E M + PD +T+ +L G +D+ +L M+ +S
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 329 GLQPGFDHYISIINLLGRAGKVKDA 353
P Y ++I+ L + ++ A
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQA 443
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 24/350 (6%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
++ NG A+ F +M KPN F SL ++ +++ NG
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 61 WKLDDY------DGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG 114
WK + Y DG +R L S+ + N++ + SMI GY +
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY-----TSMIGGYCKED 372
Query: 115 QLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWT 166
+L +A+ LF + + N +T +I+G+ AG +A +L + M D + +
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 226
+ I + EA L + + G T+ +L ++Q KT
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 227 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSMIMGLSDHGRASEA 282
+E D+ L N L++ + + ++ +S R+F + K ++ SMI G A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 283 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 332
L + M G PD+ T+ +++ +VD+ +L+ +M++ GL P
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDR-GLSP 601
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 135/306 (44%), Gaps = 25/306 (8%)
Query: 72 RSLVRMYSVFGLMDYASNALEGNLNNFDDQ-------SLNSMINGYVQAGQLEKAQELFD 124
R ++R +S G ++ A G + + +Q ++N ++ V+ G +E A+ +FD
Sbjct: 151 RCMLRNFSEIGRLNEAV----GMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFD 206
Query: 125 TVPIRNKI----AWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNE 176
+ +R + ++ M+ G G++ +A M R D+ T +++ +N
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 266
Query: 177 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN 236
L+ AI F +M+ GF P F L + + Q ++ V+ ++ ++
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 237 SLVSMYAKCGEIDDSYRIFSNMAYRDKI-----SWNSMIMGLSDHGRASEALTVYETMLE 291
+L+ K G + ++R+F + D ++ SMI G + + A ++ M E
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 292 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 351
GL+P+ T+ ++ AG + +EL N M + G P Y + I+ L + +
Sbjct: 387 QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE-GFMPNIYTYNAAIDSLCKKSRAP 445
Query: 352 DAEEFV 357
+A E +
Sbjct: 446 EAYELL 451
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 123/313 (39%), Gaps = 48/313 (15%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDS-KPNGETFISLAYACAGLSFPYLGRQLHAQLIVN 59
+I G G+ E+A LFL++ SD+ KPN T+ S+ +
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSM---------------------IG 366
Query: 60 GWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKA 119
G+ +D R RM L N+N + ++ING+ +AG +A
Sbjct: 367 GYCKEDKLNRAEMLFSRM---------KEQGLFPNVNTY-----TTLINGHCKAGSFGRA 412
Query: 120 QELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDL----FDSMPDRDSIAWTSMISG 171
EL + + + N + I + +A +L F + D + +T +I
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 172 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 231
+ I +A++ F M GF +L A + + +L + V
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 232 LILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYE 287
S++S Y K G+ID + + F NM D ++ S+I GL EA +YE
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592
Query: 288 TMLEFGLYPDTVT 300
M++ GL P VT
Sbjct: 593 AMIDRGLSPPEVT 605
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 13/235 (5%)
Query: 233 ILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYET 288
I N ++ + + G I+ + +F M+ R D S+ M++G G+ EA
Sbjct: 183 ITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTG 242
Query: 289 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 348
M++ G PD T +LTA GLV++ F M++ G +P ++ S+I+ L + G
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID-LGFKPNLINFTSLIDGLCKKG 301
Query: 349 KVKDAEEFV---LRLPVEPNHAIWGALV-GVCGLSKTDADVASRATKRLLELDPL--NAP 402
+K A E + +R +PN AL+ G+C T+ A R +L+ D N
Sbjct: 302 SIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK--AFRLFLKLVRSDTYKPNVH 359
Query: 403 GHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 457
+ ++ Y D+ L M+ +G+ L+ G S G E
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 88/425 (20%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I G +G YE A +F +M S P+ T+ SL ++
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL--------------------LMEA 350
Query: 61 WKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ 120
K D +V VF D S + +L F +SM++ + ++G L+KA
Sbjct: 351 CKKGD--------VVETEKVFS--DMRSRDVVPDLVCF-----SSMMSLFTRSGNLDKAL 395
Query: 121 ELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGY 172
F++V I + + +T +I GY G + A +L + M + D + + +++ G
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 173 VQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL 232
+ +++ EA LF EM P + T +L + L +L + D+
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 233 ILENSLVSMYAKCGEIDDSYRIFSNMAYRD----KISW---------------------- 266
+ N+L+ + K G+ID + I+++M ++ IS+
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 267 -------------NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 313
NSMI G G AS+ + E M+ G PD +++ ++
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 314 VDKGWELFNSMVNSY-GLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE----PNHAI 368
+ K + L M GL P Y SI++ R ++K+A E VLR +E P+ +
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA-EVVLRKMIERGVNPDRST 694
Query: 369 WGALV 373
+ ++
Sbjct: 695 YTCMI 699
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 151/356 (42%), Gaps = 58/356 (16%)
Query: 73 SLVRMYSVFGLMDYA---SNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF------ 123
+L+ YS GLM+ A NA+ G + + N++ING + G+ E+A+E+F
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 124 -----------------------------------DTVPIRNKIAWTCMISGYLSAGQVF 148
D VP + + ++ M+S + +G +
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP--DLVCFSSMMSLFTRSGNLD 392
Query: 149 KACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
KA F+S+ + D++ +T +I GY + +I+ A++L EM+ G + T+ +
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR--- 261
+ L + +L + D L+ + K G + ++ +F M +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 262 -DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
D +++N+++ G G A ++ M+ + P +++ ++ A G + + + +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 321 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 373
++ M+ S ++P S+I R+G D E F+ ++ E P+ + L+
Sbjct: 573 WDEMI-SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 138/319 (43%), Gaps = 56/319 (17%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
SL++MI+ V++G+L AQ + R+ ++ +++ S F C DS+ D
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVN---SLDSTFSNCGSNDSVFDL- 170
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD------- 214
+I YVQ + EA F + + GF+ L G++ + +++
Sbjct: 171 ------LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 215 -----------------------------QGRQLHGMQVKTIYEYDLILENSLVSMYAKC 245
G L +Q K +Y D++ N+L+S Y+
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP-DIVTYNTLISAYSSK 283
Query: 246 GEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 301
G +++++ + + M + ++N++I GL HG+ A V+ ML GL PD+ T+
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 302 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF---VL 358
+L G V + ++F+ M S + P + S+++L R+G + A + V
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 359 RLPVEPNHAIWGALV-GVC 376
+ P++ I+ L+ G C
Sbjct: 403 EAGLIPDNVIYTILIQGYC 421
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 104/236 (44%), Gaps = 12/236 (5%)
Query: 102 SLNSMINGYVQAGQLEKA----QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 157
+ N++I V+ G +E A QE+ + N M++ G++ K +
Sbjct: 202 ACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 158 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
++ D + + ++IS Y L+ EA L M GFSP T+ + +
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK----ISWNSM 269
++ +++ +++ D SL+ K G++ ++ ++FS+M RD + ++SM
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
+ + G +AL + ++ E GL PD V + ++ G++ L N M+
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 98 FDDQSLNSMINGYVQAGQLEKAQELF-DTVP---IRNKIAWTCMISGYLSAGQVFKACDL 153
D + N++++G+ + G ++ A+E++ D V + I+++ +++ S G + +A +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 154 FDSMPDRD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF----- 204
+D M ++ + SMI GY ++ ++ S +M++ GF P ++ L
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 205 -----GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 259
A G V +++ G V ++ Y NS++ + + ++ ++ + M
Sbjct: 633 EENMSKAFGLVKKMEEE---QGGLVPDVFTY-----NSILHGFCRQNQMKEAEVVLRKMI 684
Query: 260 YR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 297
R D+ ++ MI G +EA +++ ML+ G PD
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 103/250 (41%), Gaps = 19/250 (7%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVP---IR-NKIAWTCMISGYLSAGQVFKACDLF 154
D +L +I+G+ + G L+ A ELF + IR + + + ++ G+ G + A +++
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 155 DSMPDRD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
M ++ I+++ +++ +AEA ++ EM++ P +
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR------DKI 264
G + + D I N+L+ + + + ++ + M D
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 265 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
++NS++ G + EA V M+E G+ PD T+ ++ + + + + + M
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Query: 325 VNSYGLQPGF 334
LQ GF
Sbjct: 719 -----LQRGF 723
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 127/279 (45%), Gaps = 21/279 (7%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 157
+ N++I+G++ G ++A ++F + + +++++ ++ G + A + M
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 158 PDRD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
I +T MI G +N + EA+ L EM G P T++ L V
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494
Query: 214 DQGRQLHGMQVKTIYEYDL----ILENSLVSMYAKCGEIDDSYRIFSNMAY----RDKIS 265
+++ V IY L I+ ++L+ + G + ++ RI+ M RD +
Sbjct: 495 KTAKEI----VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550
Query: 266 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
+N ++ L G+ +EA M G+ P+TV+F ++ ++G K + +F+ M
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 326 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP 364
G P F Y S++ L + G +++AE+F+ L P
Sbjct: 611 K-VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/415 (18%), Positives = 175/415 (42%), Gaps = 97/415 (23%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGR-QLHAQLIVN 59
MI G NGF +EA++L +M+ P+ T+ +L F +GR + +++
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING-----FCKVGRFKTAKEIVCR 503
Query: 60 GWKLD-DYDGRLRRSLVRMYSVFGLMD-----YASNALEGNLNNFDDQSLNSMINGYVQA 113
+++ +G + +L+ G + Y + LEG+ D + N ++ +A
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR--DHFTFNVLVTSLCKA 561
Query: 114 GQLEKAQELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLFDSMPD---------- 159
G++ +A+E + + N +++ C+I+GY ++G+ KA +FD M
Sbjct: 562 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 621
Query: 160 -----------------------------RDSIAWTSMISGYVQNELIAEAISLFGEMMA 190
D++ + ++++ ++ +A+A+SLFGEM+
Sbjct: 622 GSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 681
Query: 191 HGFSPLNGTF---------------AVLFG----AMGSV--------AYLD----QGRQL 219
P + T+ A+LF A G+V ++D G+
Sbjct: 682 RSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 741
Query: 220 HGMQVKTI-----YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK----ISWNSMI 270
G+ + + D++ N+++ Y++ G+I+ + + M ++ ++N ++
Sbjct: 742 AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILL 801
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
G S S + +Y +++ G+ PD +T ++ + +++ G ++ + +
Sbjct: 802 HGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 856
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 27/289 (9%)
Query: 106 MINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKA----CDLFDSM 157
MI+G + G L++A L + + + + ++ +I+G+ G+ A C ++
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 158 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 217
+ I ++++I + + EAI ++ M+ G + + TF VL ++ + +
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 218 QLHGMQVKTIYEYDLILENS-----LVSMYAKCGEIDDSYRIFSNMA----YRDKISWNS 268
+ M+ T D IL N+ L++ Y GE ++ +F M + ++ S
Sbjct: 569 EF--MRCMT---SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 269 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 328
++ GL G EA +++ DTV + +LTA +G + K LF MV
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR- 682
Query: 329 GLQPGFDHYISIINLLGRAGK----VKDAEEFVLRLPVEPNHAIWGALV 373
+ P Y S+I+ L R GK + A+E R V PN ++ V
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 731
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 105/560 (18%), Positives = 191/560 (34%), Gaps = 134/560 (23%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVNG 60
+I GF G ++ A + ++ PNG + +L Y C + +++ +I+ G
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 61 WKLDDYD-GRLRRSLVRMYSVFGLMDY----ASNALEGNLNNFDDQSLNSMINGYVQAGQ 115
D + L SL + V ++ S+ + N +FD +INGY +G+
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD-----CLINGYGNSGE 598
Query: 116 LEKAQELFD--------------------------------------TVPIR-NKIAWTC 136
KA +FD VP + + +
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 137 MISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHG 192
+++ +G + KA LF M R DS +TS+ISG + AI E A G
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718
Query: 193 -FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 251
P + M G + D++ N+++ Y++ G+I+ +
Sbjct: 719 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778
Query: 252 YRIFSNMA------------------------------YR---------DKISWNSMIMG 272
+ M YR DK++ +S+++G
Sbjct: 779 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM-------- 324
+ + L + + + G+ D TF +++ C G ++ ++L M
Sbjct: 839 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898
Query: 325 --------------------------VNSYGLQPGFDHYISIINLLGRAGKVKDA----E 354
++ G+ P YI +IN L R G +K A E
Sbjct: 899 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958
Query: 355 EFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL-NAPGHVALCNIYAA 413
E + PN A + + K AD A+ + +L++ + L ++
Sbjct: 959 EMIAHKICPPNVAESAMVRALAKCGK--ADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 1016
Query: 414 NDRHIELTSLRKEMRIKGVR 433
N IE LR M G++
Sbjct: 1017 NGNVIEALELRVVMSNCGLK 1036
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 120/284 (42%), Gaps = 25/284 (8%)
Query: 95 LNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR--NKIAWTC--MISGYLSAGQVFKA 150
L N + + +I Y++ G ++ + E+F + + N +TC ++ + +G+
Sbjct: 158 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 151 CDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 206
M R D + +I+ ++ L +M G++P T+ +
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 207 MGSVAYLDQGR------QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
Y +GR L M+ K + + D+ N L+ + I Y + +M
Sbjct: 278 -----YCKKGRFKAAIELLDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 261 R----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
R +++++N++I G S+ G+ A + ML FGL P+ VTF ++ G +
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
++F M+ + GL P Y +++ L + + A F +R+
Sbjct: 392 ALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 155/361 (42%), Gaps = 64/361 (17%)
Query: 105 SMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR 160
++ING+ + G++++A +LF + R + IA++ +I GY AG + LF +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 161 ----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 216
D + ++S I YV++ +A A ++ M+ G SP T+ +L + + +
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 217 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM------------------ 258
++G +K E ++ +SL+ + KCG + + ++ +M
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 259 ---------AYR------------DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 297
A R + + +NS+I G R EAL V+ M +G+ PD
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 298 TVTFLGVLTA-------CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV 350
TF V+ C H G +LF+ M + + +I+LL + ++
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPT-IGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRI 588
Query: 351 KDAEEFVLRL---PVEPNHAIWGALV-GVCGLSKTDADVASRATKRLLELDPLNAPGHVA 406
+DA +F L +EP+ + ++ G C L + D A R + LL++ P P V
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE--AERIFE-LLKVTPF-GPNTVT 644
Query: 407 L 407
L
Sbjct: 645 L 645
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 131/296 (44%), Gaps = 22/296 (7%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKI------AWTCMISGYLSAGQVFKACDLFD 155
S+ M+N + + +++ + FD + R I A ++ G+V KA D
Sbjct: 183 SVYRMLNSLIGSDRVDLIADHFDKL-CRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHR 241
Query: 156 SMPDRD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 211
+ +R ++ ++ G ++ I A L ++ G +P TF L
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG 300
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWN 267
+D+ L + + E DLI ++L+ Y K G + +++FS ++ D + ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 268 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 327
S I G + A VY+ ML G+ P+ VT+ ++ G + + + ++ ++
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 328 YGLQPGFDHYISIINLLGRAGKVKDA---EEFVLRLPVEPNHAIWGALVGVCGLSK 380
G++P Y S+I+ + G ++ E ++++ P+ I+G LV GLSK
Sbjct: 421 -GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD--GLSK 473
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 140/331 (42%), Gaps = 31/331 (9%)
Query: 76 RMYSVFGLM-DYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF-DTVPI---RN 130
R+Y FG+ +E ++ + +S+I+G+ + G L L+ D + + +
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTY-----SSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 131 KIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFG 186
+ + ++ G G + A M + + + + S+I G+ + EA+ +F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 187 EMMAHGFSPLNGTFA-VLFGAMGSVAYLDQ-----GRQLHGMQVKTIYEYDLILENSLVS 240
M +G P TF V+ ++ A+ G QL + + D+ + N ++
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 580
Query: 241 MYAKCGEIDDSYRIFSNM----AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 296
+ KC I+D+ + F+N+ D +++N+MI G R EA ++E + P
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640
Query: 297 DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA----GKVKD 352
+TVT ++ +D +F+ M G +P Y +++ ++ G K
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 353 AEEFVLRLPVEPNHAIWGALV-GVCGLSKTD 382
EE + + P+ + ++ G+C + D
Sbjct: 700 FEEMQEK-GISPSIVSYSIIIDGLCKRGRVD 729
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 136/312 (43%), Gaps = 36/312 (11%)
Query: 43 LSFPYLGRQLHAQLIV-----NGW-KLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLN 96
S LG+ + ++V +GW +L+ +D L+ + R+ ++G+ + ++
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK--VFRLMGIYGI--------KPDVA 532
Query: 97 NFDD-QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAW---TCMISGYL--------SA 144
F ++ M + + + + +LFD + RNKI+ C + +L A
Sbjct: 533 TFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ-RNKISADIAVCNVVIHLLFKCHRIEDA 591
Query: 145 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 204
+ F +L + + D + + +MI GY + EA +F + F P T +L
Sbjct: 592 SKFFN--NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 205 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR--- 261
+ +D ++ + + + + + L+ ++K +I+ S+++F M +
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Query: 262 -DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 320
+S++ +I GL GR EA ++ ++ L PD V + ++ G + + L
Sbjct: 710 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 769
Query: 321 FNSMVNSYGLQP 332
+ M+ + G++P
Sbjct: 770 YEHMLRN-GVKP 780
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 126/317 (39%), Gaps = 57/317 (17%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYA-------CAGLSFPYLGRQLH 53
+I G+ ++EAL +F M + KP+ TF ++ C + P +G QL
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK-PTIGLQLF 560
Query: 54 AQLIVNGWKLD-DYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQ 112
+ N D + L + + + + +N +EG + D + N+MI GY
Sbjct: 561 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP-DIVTYNTMICGYCS 619
Query: 113 AGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIA 164
+L++A+ +F+ + + N + T +I + A +F M ++ +++
Sbjct: 620 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 679
Query: 165 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 224
+ ++ + ++ I + LF EM G SP
Sbjct: 680 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISP----------------------------- 710
Query: 225 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSMIMGLSDHGRAS 280
+I Y +I++ K G +D++ IF D +++ +I G GR
Sbjct: 711 -SIVSYSIIIDG-----LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 764
Query: 281 EALTVYETMLEFGLYPD 297
EA +YE ML G+ PD
Sbjct: 765 EAALLYEHMLRNGVKPD 781
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 133/287 (46%), Gaps = 16/287 (5%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 157
+ NS+I G+ A L + R N + ++ +I ++ G++ +A L+D M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 158 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
R D ++S+I+G+ ++ + EA +F M++ P T+ L +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSM 269
D+G +L + + + +L+ + + E D++ +F M D ++++ +
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 329
+ GL ++G+ AL V+E + + PD T+ ++ AG V+ GW+LF S+ + G
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKG 531
Query: 330 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 373
++P Y ++++ R G ++A+ + E P+ + L+
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 12/285 (4%)
Query: 152 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 211
D+ S P + ++ ++S + ISL +M G S T+++L +
Sbjct: 71 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRS 130
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA---YR-DKISWN 267
L + +K YE D++ NSL++ + I D+ + M Y+ D ++N
Sbjct: 131 QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 268 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 327
++I GL H RASEA+ + + M+ G PD VT+ V+ G +D L M
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 328 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDAD 384
++PG Y +II+ L V DA + + PN + +L+ C +
Sbjct: 251 -KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CLCNYGRWS 308
Query: 385 VASRATKRLLE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEM 427
ASR ++E ++P N AL + + + +E L EM
Sbjct: 309 DASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 125/292 (42%), Gaps = 36/292 (12%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
D +LNS++NG+ ++ A L GQ+ + P
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSL---------------------VGQMVE----MGYQP 184
Query: 159 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 218
DS + ++I G ++ +EA++L M+ G P T+ ++ + +D
Sbjct: 185 --DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 219 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLS 274
L + E +++ N+++ ++D+ +F+ M + + +++NS+I L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 275 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 334
++GR S+A + M+E + P+ VTF ++ A G + + +L++ M+ + P
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDI 361
Query: 335 DHYISIIN---LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGLSKTD 382
Y S+IN + R + K E ++ PN + L+ G C + D
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 126/269 (46%), Gaps = 15/269 (5%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 154
D + N++I+G + + +A L D + ++ + + + +++G G + A L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 155 DSMP----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
M + + + ++I + + +A++LF EM G P T+ L + +
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 211 A-YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKIS 265
+ D R L M + I +++ ++L+ + K G++ ++ +++ M R D +
Sbjct: 305 GRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 266 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
++S+I G H R EA ++E M+ +P+ VT+ ++ A VD+G ELF M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM- 422
Query: 326 NSYGLQPGFDHYISIINLLGRAGKVKDAE 354
+ GL Y ++I+ +A + +A+
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 97 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI----AWTCMISGYLSAGQVFKACD 152
D Q + + + Q A +L D +P++ + A+T ++ Y G+ KA D
Sbjct: 172 KLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAID 231
Query: 153 LFDSM----PDRDSIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 207
LF+ M P + + ++ + + + + + EM + G T + + A
Sbjct: 232 LFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSAC 291
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DK 263
L + ++ YE + N+L+ ++ K G ++ + M D
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351
Query: 264 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 323
+++N ++ G + EA V E M + G+ P+ +T+ V+ A AG D+ +LF S
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 324 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCG 377
M + G P Y ++++LLG+ + + + + + PN A W ++ +CG
Sbjct: 412 MKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCG 467
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 119/297 (40%), Gaps = 20/297 (6%)
Query: 80 VFGLMDYASNALEGNLN-------NFDDQSLNSMINGYVQAGQLEKAQELFDTVPI---- 128
VFG M + + G L+ FD+ + +++++ + G L +A+E F +
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 129 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISL 184
+ + ++ + AG +A + M + DS+ + +++ YV+ EA +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 185 FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK 244
M G P T+ + A G D+ +L + + N+++S+ K
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 245 CGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 300
++ ++ +M ++ +WN+M+ + G V+ M G PD T
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 301 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 357
F +++A G +++ M + G Y +++N L R G + E +
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRA-GFNACVTTYNALLNALARKGDWRSGENVI 549
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 139/341 (40%), Gaps = 49/341 (14%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR- 160
+LN+M N L E P R I + + + + + K+ LFD M +R
Sbjct: 148 TLNNMTNPETAPLVLNNLLETMK--PSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERG 205
Query: 161 ---DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 217
D+ +T++IS QN + A+ F +M + G P N T A + A G +D
Sbjct: 206 IKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMAL 265
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA------------------ 259
L+ + D + ++L+ +Y G D I+ M
Sbjct: 266 SLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSM 325
Query: 260 ------------YRDKIS------WNSMIMGLSDHGRA---SEALTVYETMLEFGLYPDT 298
Y+D I+ W++ + +GRA +AL +Y M E GL
Sbjct: 326 GRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTV 385
Query: 299 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 358
+ + +L+ CA VD+ +E+F M N P + S+I + +G+V +AE +L
Sbjct: 386 ILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALL 445
Query: 359 RLP---VEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 396
++ EP + +++ G +K DV R ++LEL
Sbjct: 446 QMREAGFEPTLFVLTSVIQCYGKAKQVDDVV-RTFDQVLEL 485
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 14/247 (5%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 154
D+ ++ +MI+ Y +AG ++ A L+D + + ++ +I Y +G +++
Sbjct: 244 DNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIY 303
Query: 155 DSMP----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
+ M + + + +I + + +A ++ +++ +GF+P T+A L A G
Sbjct: 304 EEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRA 363
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA---YRDKISW- 266
Y D ++ + +IL N+L+SM A +D+++ IF +M D SW
Sbjct: 364 RYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWT 423
Query: 267 -NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
+S+I + GR SEA M E G P V+ A VD F+ ++
Sbjct: 424 FSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Query: 326 NSYGLQP 332
G+ P
Sbjct: 484 E-LGITP 489
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 137/285 (48%), Gaps = 16/285 (5%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 159
+S+I+ G+ A L + R N + ++ +I ++ G++ +A L+D M
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 160 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
R D ++S+I+G+ ++ + EA +F M++ P T++ L +++
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSMIM 271
G +L + + + +L+ + + + D++ +F M + + +++N ++
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 331
GL +G+ ++A+ V+E + + PD T+ ++ AG V+ GWELF ++ + G+
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVS 535
Query: 332 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 373
P Y ++I+ R G ++A+ + ++ + PN + L+
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 122/263 (46%), Gaps = 13/263 (4%)
Query: 132 IAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGE 187
+ + +++GY + ++ A L D M + D+ +T++I G + +EA++L +
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 188 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 247
M+ G P T+ + + +D L K E D+++ N+++ K
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 248 IDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 303
+DD+ +F+ M + D +++S+I L ++GR S+A + M+E + P+ VTF
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 304 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN---LLGRAGKVKDAEEFVLRL 360
++ A G + + +L++ M+ + P Y S+IN + R + K E ++
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 361 PVEPNHAIWGALV-GVCGLSKTD 382
PN + L+ G C + +
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVE 415
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 119/285 (41%), Gaps = 12/285 (4%)
Query: 152 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 211
D+ S P + + ++S + ISL +M G S T+++ +
Sbjct: 73 DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA---YR-DKISWN 267
L + +K YE D++ +SL++ Y I D+ + M Y+ D ++
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 268 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 327
++I GL H +ASEA+ + + M++ G PD VT+ V+ G +D L M
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 328 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDAD 384
++ Y +II+ L + + DA + + P+ + +L+ C +
Sbjct: 253 -KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS-CLCNYGRWS 310
Query: 385 VASRATKRLLE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEM 427
ASR ++E ++P N AL + + + +E L EM
Sbjct: 311 DASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYDEM 354
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 138/316 (43%), Gaps = 51/316 (16%)
Query: 104 NSMINGYVQAGQLEKAQELF---DTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDSMPD 159
N++ING + L A E+F + IR + + + +ISG ++G+ A L M
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 160 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 215
R + I +T++I +V+ + EA +L+ EM+ P T+ L L
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 216 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 271
+ + + V D++ N+L++ + K ++D ++F M Y+ D ++N++I
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 272 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-------------- 317
G G+ + A V+ M++ G+ PD VT+ +L + G ++K
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 318 ---------------------WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 356
W LF S+ G++P YI++I+ L R G ++A++
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRK-GVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 357 VLRLPVE---PNHAIW 369
R+ + P+ I+
Sbjct: 487 CRRMKEDGFMPSERIY 502
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 51/306 (16%)
Query: 102 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 161
+L S++NG+ Q + ++A L D++ D F +P+
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSM-------------------------DGFGFVPN-- 183
Query: 162 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF-GAMGSVAYLDQGRQLH 220
+ + ++I+G +N + A+ +F M G T+ L G S + D R L
Sbjct: 184 VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR 243
Query: 221 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI----SWNSMIMGLSDH 276
M VK + ++I +L+ + K G + ++ ++ M R + ++NS+I G H
Sbjct: 244 DM-VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 277 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 336
G +A +++ M+ G +PD VT+ ++T + V+ G +LF M GL
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFT 361
Query: 337 YISIINLLGRAGKVKDAEEFVLRLP---VEP--------------NHAIWGALVGVCGLS 379
Y ++I+ +AGK+ A++ R+ V P N I ALV V L
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 380 KTDADV 385
K++ DV
Sbjct: 422 KSEMDV 427
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 125/266 (46%), Gaps = 12/266 (4%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR---NKIAWTCMISGYLSAGQVFKACDLFD 155
D+ +++ + G ++ A +LF+ + +R N +T ++ G+ G++ +A +
Sbjct: 217 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLV 276
Query: 156 SMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 211
M + D + +T+++SGY +A+A L +M GF P + VL A+ V
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 212 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWN 267
+++ ++ + E D++ +LVS + K G+ID Y + +M + ++++
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYM 396
Query: 268 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 327
+++ E L + E M + +PD + V+ G V + L+N M +
Sbjct: 397 HIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 328 YGLQPGFDHYISIINLLGRAGKVKDA 353
GL PG D ++ +IN L G + +A
Sbjct: 457 -GLSPGVDTFVIMINGLASQGCLLEA 481
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 8/234 (3%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 158
D + NSMI G+ + + + A+ +FD + + + + +I Y A +V + L +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 159 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 214
R ++ + ++I G+ + + + A LF EM++HG P T +L L+
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 215 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMI 270
+ +L + + + D + N ++ K ++D+++ +F ++ D ++N MI
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 271 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
G S+A ++ M + G PD T+ ++ C AG +DK EL + M
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 182/487 (37%), Gaps = 103/487 (21%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISLAYACAGLSFPYLGRQLHAQLIVN- 59
+ G GF E A+ LF QM P TF +L GL GR L A +VN
Sbjct: 198 LFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLI---NGLCLE--GRVLEAAALVNK 251
Query: 60 ----GWKLDDYD-GRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAG 114
G +D G + + +M ++ S E ++ D +++I+ + G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP-DVVIYSAIIDRLCKDG 310
Query: 115 QLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWT 166
AQ LF + + N + CMI G+ S G+ A L M +R D + +
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 167 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 226
++IS V+ + EA L EM+ P
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFP------------------------------- 399
Query: 227 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 286
D + NS++ + K DD+ +F MA D +++N++I R E + +
Sbjct: 400 ----DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 287 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP----------GFDH 336
+ GL +T T+ ++ ++ +LF M+ S+G+ P GF
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI-SHGVCPDTITCNILLYGFCE 514
Query: 337 -------------------------YISIINLLGRAGKVKDAEEFVLRLP---VEPNHAI 368
Y II+ + + KV +A + LP VEP+
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 574
Query: 369 WGALV-GVCGLSK-TDADVASRATKRLLELDPLNAPGHVAL--CNIYAANDRHIELTSLR 424
+ ++ G CG S +DA+V K +P N+ + + C D+ IEL S
Sbjct: 575 YNVMISGFCGKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCLKAGEIDKSIELIS-- 631
Query: 425 KEMRIKG 431
EMR G
Sbjct: 632 -EMRSNG 637
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 129/310 (41%), Gaps = 32/310 (10%)
Query: 104 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMP- 158
N +I +V+ + + A L+ + IR N ++ +I + ++ + F +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 159 ---DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF---------------SPLNGTF 200
D + + +++ G + I+EA++LFG M+ GF +P+ TF
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
L + + + L V D++ ++V+ K G+ + + S M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 261 R----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
D + ++++I L G S+A ++ MLE G+ P+ T+ ++ G
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV 373
L M+ + P + ++I+ + GK+ +AE+ +L + P+ + +++
Sbjct: 350 AQRLLRDMIER-EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 374 -GVCGLSKTD 382
G C ++ D
Sbjct: 409 YGFCKHNRFD 418
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 128/287 (44%), Gaps = 18/287 (6%)
Query: 89 NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVP---IRNKI-AWTCMISGYLSA 144
N +E L + N ++NG V A ++ A+ +F+ + I+ I + MI GY A
Sbjct: 216 NGIEPTLYTY-----NFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 145 GQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 200
GQ KA + M R D I + +MI + ++L+ EM G F
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 201 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 260
+++ G + L++G + ++ + ++ + L+ YAK G ++D+ R+ M
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 261 R----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 316
D ++++ ++ GL +GR EAL + T GL +++ + ++ AG VD+
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 317 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 363
LF M + + Y ++I+ + KV +A R+ E
Sbjct: 451 AERLFEEMSEKGCTRDSY-CYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 29/321 (9%)
Query: 99 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 154
D + N+MI GY +AGQ +KA E + R +KI + MI + L+
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 155 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL---FGAM 207
M ++ A++ +I G + + E ++F M+ G P + VL +
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 208 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 267
GSV D R LH M + ++ D++ + +V+ K G ++++ F + D ++ N
Sbjct: 376 GSVE--DAIRLLHRM-IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRF-DGLAIN 431
Query: 268 SM-----IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 322
SM I GL GR EA ++E M E G D+ + ++ A VD+ LF
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 323 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGAL-VGVCGL 378
M G Y +++ + + + ++A + ++ + P A + AL G+C
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Query: 379 SKTDADVASRATKRLLELDPL 399
K +RA K L EL P+
Sbjct: 552 GKV-----ARACKILDELAPM 567
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 123/283 (43%), Gaps = 10/283 (3%)
Query: 164 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 223
A ++I + + ++ E + ++ +M +G P T+ L + S ++D ++ +
Sbjct: 189 AANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM 248
Query: 224 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRA 279
+ D++ N+++ Y K G+ + +M R DKI++ +MI
Sbjct: 249 ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDF 308
Query: 280 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 339
+ +Y+ M E G+ F V+ G +++G+ +F +M+ G +P Y
Sbjct: 309 GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK-GSKPNVAIYTV 367
Query: 340 IINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV-GVCGLSKTDADVASRATKRLLE 395
+I+ ++G V+DA + R+ E P+ + +V G+C + + + T R
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 396 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 438
L +N+ + +L + R E L +EM KG + C
Sbjct: 428 L-AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 469
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 131/339 (38%), Gaps = 51/339 (15%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETFISL--AYACAGLSFPYLGRQLHAQLIV 58
+IGG G E +F M SKPN + L YA +G S R LH ++I
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSG-SVEDAIRLLH-RMID 390
Query: 59 NGWKLDDYDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEK 118
G+K D V YSV ++NG + G++E+
Sbjct: 391 EGFKPD----------VVTYSV-------------------------VVNGLCKNGRVEE 415
Query: 119 AQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD----RDSIAWTSMIS 170
A + F T N + ++ +I G AG+V +A LF+ M + RDS + ++I
Sbjct: 416 ALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 171 GYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 229
+ ++ + EAI+LF M G T+ +L M ++ +L M +
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGIT 535
Query: 230 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI---SWNSMIMGLSDHGRASEALTVY 286
+L + G++ + +I +A I + MI L GR EA +
Sbjct: 536 PTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLA 595
Query: 287 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
+ + E G ++ A G D +L +S +
Sbjct: 596 DGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKI 634
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 19/275 (6%)
Query: 102 SLNSMINGYVQAGQLEKAQELF-------DTVPIRNKIAWTCMISGYLSAGQVFKACDLF 154
+ NS+I +Q GQ EK E++ D P + I ++ +IS Y G+ A LF
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP--DTITYSALISSYEKLGRNDSAIRLF 256
Query: 155 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 210
D M D +T+++ Y + + +A+ LF EM G SP T+ L +G
Sbjct: 257 DEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKA 316
Query: 211 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISW 266
+D+ + ++ D++ N+L+++ K G +++ +FS M +S+
Sbjct: 317 GRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSY 376
Query: 267 NSMIMGL-SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 325
N++I L SE + ++ M + P T+ ++ V+K L M
Sbjct: 377 NTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM- 435
Query: 326 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 360
+ G P Y S+IN LG+A + + A E L
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 123/299 (41%), Gaps = 51/299 (17%)
Query: 103 LNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTCMISG-YLSAGQVFKACDLFDSM 157
LN+++N + G++E+ +F + + +++ +I + S V + FD M
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 158 PDRDSIA-----WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 212
DS++ ++ +I GY + + +A+ L EM GF P + L A+G
Sbjct: 401 -KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 213 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNS 268
+ +L + + ++ + KCG++ ++ +F+ M + D ++N+
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 269 MIMGLSDHGRASEA-----------------------------------LTVYETMLEFG 293
++ G+ G +EA + ++ET+ G
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 579
Query: 294 LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 352
+ PD VT+ +L AHAG+ ++ + M + G + Y SI++ +G KD
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK-GFEYDAITYSSILDAVGNVDHEKD 637
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 115/235 (48%), Gaps = 16/235 (6%)
Query: 104 NSMINGYVQAGQLEKAQELF------DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 157
NS++NG+ +L+KA+++F D P + + + +I G+ + +V +LF M
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFP--DVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 158 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
R D++ +T++I G + A +F +M++ G P T+++L + + L
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSM 269
++ ++ K+ + D+ + +++ K G++DD + +F +++ + + +++N+M
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 324
I GL EA + + M E G P++ T+ ++ A G EL M
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 130/291 (44%), Gaps = 21/291 (7%)
Query: 104 NSMINGYVQAGQLEKAQELFDTV------PIRNKIAWTCMISGYLSAGQVFKACDLFDSM 157
N +IN + + Q+ A L + P + + + +++GY ++ A L D M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 158 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 213
+ D+I +T++I G + +EA++L M+ G P T+ V+ +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 214 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSM 269
D L E D+++ N+++ K +DD+ +F M + + ++++S+
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 270 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 329
I L +GR S+A + M+E + P+ VTF ++ A G + +L++ M+
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-S 360
Query: 330 LQPGFDHYISIIN---LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVC 376
+ P Y S++N + R K K EF++ P+ + L+ G C
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 128/293 (43%), Gaps = 17/293 (5%)
Query: 106 MINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR- 160
++NG + G + A L + + + + + +I V A +LF M +
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 161 ---DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 217
+ + ++S+IS ++A L +M+ +P TF L A +
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 218 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIMGL 273
+L+ +K + D+ NSLV+ + +D + ++F M + D +++N++I G
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 274 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 333
R + ++ M GL DTVT+ ++ H G D ++F MV S G+ P
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV-SDGVPPD 469
Query: 334 FDHYISIINLLGRAGKVKDAEE---FVLRLPVEPNHAIWGALV-GVCGLSKTD 382
Y +++ L GK++ A E ++ + ++ + I+ ++ G+C K D
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 38/400 (9%)
Query: 11 YEEALLLFLQMTLSDSKPNGETF-ISLAYACA----GLSFPYLGRQLHAQLIVNGWKLDD 65
+ EA LLF +M +PN T+ I + C + +LG +++ G KL
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG-----EMVDTGLKLSV 437
Query: 66 YDGRLRRSLVRMYSVFGLMDYASNALEGNLNNFDDQSL---NSMINGYVQAGQLEKAQEL 122
Y SL+ + FG + A + +N + ++ S++ GY G++ KA L
Sbjct: 438 YP---YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 123 FDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM------PDRDSIAWTSMISGY 172
+ + + + +T ++SG AG + A LF+ M P+R + + MI GY
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR--VTYNVMIEGY 552
Query: 173 VQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL 232
+ +++A EM G P ++ L + + + K E +
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 233 ILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYET 288
I L+ + + G+++++ + M R D + + +I G H + +
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 289 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 348
M + GL PD V + ++ A + G + + +++ M+N G P Y ++IN L +AG
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-GCVPNEVTYTAVINGLCKAG 731
Query: 349 KVKDAEEFVLRL-PVE--PNHAIWGALVGVCGLSKTDADV 385
V +AE ++ PV PN +G + + L+K + D+
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDI--LTKGEVDM 769
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 13/265 (4%)
Query: 105 SMINGYVQAGQLEKAQELFDT-VPIR---NKIAWTCMISGYLSAGQVFKACDLFDSMPD- 159
+++ G + + E E+ D + +R ++ A + ++ G G++ +A +L + D
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361
Query: 160 ---RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 216
+ + ++I + EA LF M G P + T+++L LD
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 217 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD----KISWNSMIMG 272
G V T + + NSL++ + K G+I + + M + +++ S++ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 273 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 332
G+ ++AL +Y M G+ P TF +L+ AGL+ +LFN M + ++P
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKP 540
Query: 333 GFDHYISIINLLGRAGKVKDAEEFV 357
Y +I G + A EF+
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFL 565
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 149/387 (38%), Gaps = 64/387 (16%)
Query: 1 MIGGFAWNGFYEEALLLFLQMTLSDSKPNGETF-ISLAYACA----GLSFPYLGRQLHAQ 55
++ G G +A+ LF +M + KPN T+ + + C +F +L +
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL-----KE 567
Query: 56 LIVNGWKLDDYDGRLRRSLVRMYSVFGLMDYAS---NALEGNLNNFDDQSLNSMINGYVQ 112
+ G D Y R L+ + G A + L ++ +++G+ +
Sbjct: 568 MTEKGIVPDTYS---YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 113 AGQLEKA----QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIA 164
G+LE+A QE+ + + + +I G L L M DR D +
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 165 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL-HGMQ 223
+TSMI + EA ++ M+ G P T+ + + ++++ L MQ
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 224 V-------------------------KTIYEYDLILE---------NSLVSMYAKCGEID 249
K + ++ IL+ N L+ + + G I+
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 250 DSYRIFSNM----AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 305
++ + + M D I++ +MI L +A+ ++ +M E G+ PD V + ++
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Query: 306 TACAHAGLVDKGWELFNSMVNSYGLQP 332
C AG + K EL N M+ GL P
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQ-GLIP 890