Miyakogusa Predicted Gene

Lj3g3v3527150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527150.1 tr|G7KK50|G7KK50_MEDTR Alanyl-tRNA synthetase
(Fragment) OS=Medicago truncatula GN=MTR_6g045600 PE=3,92.76,0,Class
II aaRS and biotin synthetases,NULL; AA_TRNA_LIGASE_II_ALA,Alanyl-tRNA
synthetase, class IIc, ,CUFF.46379.1
         (334 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50200.1 | Symbols: ALATS, ACD | Alanyl-tRNA synthetase | chr...   556   e-159
AT1G50200.2 | Symbols: ALATS | Alanyl-tRNA synthetase | chr1:185...   556   e-159
AT5G22800.1 | Symbols: EMB86, EMB1030, EMB263 | Alanyl-tRNA synt...   216   2e-56

>AT1G50200.1 | Symbols: ALATS, ACD | Alanyl-tRNA synthetase |
           chr1:18591429-18598311 REVERSE LENGTH=1003
          Length = 1003

 Score =  556 bits (1434), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 254/293 (86%), Positives = 270/293 (92%), Gaps = 1/293 (0%)

Query: 41  ATAMPGPDALDLEWPAKRVRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFK 100
              MPG +  + +WPAKRVRDT+V+FF+  K H +W SSPVVP NDPTLLFANAGMNQ+K
Sbjct: 46  VAVMPGSEPSETQWPAKRVRDTYVDFFR-GKGHKFWPSSPVVPHNDPTLLFANAGMNQYK 104

Query: 101 PIFLGTADPNTDLSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYF 160
           PIFLGTADPNT+LSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYF
Sbjct: 105 PIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYF 164

Query: 161 KTEAIGWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWLQFLPPGRVLPFGC 220
           K EAI WAWELLTKVY LP+DRIYATYFGGDEKAGL PD EARDIWL+ LP GRVLPFGC
Sbjct: 165 KKEAIEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRVLPFGC 224

Query: 221 KDNFWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLK 280
           KDNFWEMGDTGPCGPCTEIH+DRIGNRDAASLVNNDDPTC+EIWNLVFIQFNRE+DGSLK
Sbjct: 225 KDNFWEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLK 284

Query: 281 SLPAKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQLATGARPYSGKVG 333
            LPAKHVDTGMGFERLTS+LQNKMSNYDTDVF+PIFD IQ ATGARPYSGKVG
Sbjct: 285 PLPAKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVG 337


>AT1G50200.2 | Symbols: ALATS | Alanyl-tRNA synthetase |
           chr1:18591429-18598167 REVERSE LENGTH=963
          Length = 963

 Score =  556 bits (1432), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 254/290 (87%), Positives = 270/290 (93%), Gaps = 1/290 (0%)

Query: 44  MPGPDALDLEWPAKRVRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFKPIF 103
           MPG +  + +WPAKRVRDT+V+FF+  K H +W SSPVVP NDPTLLFANAGMNQ+KPIF
Sbjct: 1   MPGSEPSETQWPAKRVRDTYVDFFR-GKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIF 59

Query: 104 LGTADPNTDLSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTE 163
           LGTADPNT+LSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK E
Sbjct: 60  LGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKE 119

Query: 164 AIGWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWLQFLPPGRVLPFGCKDN 223
           AI WAWELLTKVY LP+DRIYATYFGGDEKAGL PD EARDIWL+ LP GRVLPFGCKDN
Sbjct: 120 AIEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRVLPFGCKDN 179

Query: 224 FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKSLP 283
           FWEMGDTGPCGPCTEIH+DRIGNRDAASLVNNDDPTC+EIWNLVFIQFNRE+DGSLK LP
Sbjct: 180 FWEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLP 239

Query: 284 AKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIQLATGARPYSGKVG 333
           AKHVDTGMGFERLTS+LQNKMSNYDTDVF+PIFD IQ ATGARPYSGKVG
Sbjct: 240 AKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVG 289


>AT5G22800.1 | Symbols: EMB86, EMB1030, EMB263 | Alanyl-tRNA
           synthetase, class IIc | chr5:7616221-7619961 REVERSE
           LENGTH=978
          Length = 978

 Score =  216 bits (550), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/264 (45%), Positives = 158/264 (59%), Gaps = 22/264 (8%)

Query: 59  VRDTFVNFFKESKNHVYWQSSPVVPFNDPTLLFANAGMNQFKPIFLGTADPNTDLSKLSR 118
           +R  F+ FF  S+ H    SS +VP  DPT+L   AGM QFKPIFLG         ++  
Sbjct: 83  IRRRFLEFFA-SRGHKVLPSSSLVP-EDPTVLLTIAGMLQFKPIFLGKVP-----REVPC 135

Query: 119 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTEAIGWAWELLTKVYKL 178
           A   Q+CIR     NDL++VGK   HHTFFEMLGN+SFGDYFK EAI WAWEL T  + L
Sbjct: 136 ATTAQRCIRT----NDLENVGKTARHHTFFEMLGNFSFGDYFKKEAIKWAWELSTIEFGL 191

Query: 179 PSDRIYATYFGGDEKAGLAPDTEARDIWLQF--LPPGRVLPFGCKDNFWEMGDTGPCGPC 236
           P++R++ + +  D+        EA +IW     +   R+   G  DNFW  G TGPCGPC
Sbjct: 192 PANRVWVSIYEDDD--------EAFEIWKNEVGVSVERIKRMGEADNFWTSGPTGPCGPC 243

Query: 237 TEIHFDRIGNRDAASLVN-NDDPTCIEIWNLVFIQFNREADGSLKSLPAKHVDTGMGFER 295
           +E+++D    R     V+  DD   IE +NLVF+Q+N+  DG L+ L  K++DTG+G ER
Sbjct: 244 SELYYDFYPERGYDEDVDLGDDTRFIEFYNLVFMQYNKTEDGLLEPLKQKNIDTGLGLER 303

Query: 296 LTSILQNKMSNYDTDVFLPIFDAI 319
           +  ILQ   +NY+TD+  PI   I
Sbjct: 304 IAQILQKVPNNYETDLIYPIIAKI 327