Miyakogusa Predicted Gene
- Lj3g3v3500230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3500230.1 tr|D7LE02|D7LE02_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,27.2,5e-19,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PGR3 (PROTON GRADIENT REGULATION 3),NU,CUFF.45874.1
(259 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 167 7e-42
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 159 2e-39
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 6e-37
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 150 6e-37
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 4e-36
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 1e-35
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 146 2e-35
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 6e-35
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 8e-35
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 2e-34
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 2e-34
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 142 2e-34
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 140 1e-33
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 1e-33
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 138 4e-33
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 4e-33
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 8e-33
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 2e-32
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 4e-32
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 4e-32
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 5e-32
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 8e-32
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 133 9e-32
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 9e-32
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 1e-31
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 2e-31
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 132 2e-31
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 132 3e-31
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 1e-30
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 2e-30
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 4e-30
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 128 4e-30
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 128 4e-30
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 4e-30
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 4e-30
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 7e-30
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 9e-30
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 1e-29
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 3e-29
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 3e-29
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 125 3e-29
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 4e-29
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 4e-29
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 124 6e-29
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 6e-29
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 7e-29
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 1e-28
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 1e-28
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 1e-28
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 122 3e-28
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 122 3e-28
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 4e-28
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 4e-28
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 4e-28
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 5e-28
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 5e-28
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 120 6e-28
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 7e-28
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 8e-28
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 9e-28
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 9e-28
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 120 1e-27
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 4e-27
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 5e-27
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 7e-27
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 7e-27
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 8e-27
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 117 8e-27
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 1e-26
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-26
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 3e-26
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 3e-26
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 115 3e-26
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 115 4e-26
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 5e-26
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 6e-26
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 6e-26
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 7e-26
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 7e-26
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 7e-26
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 114 9e-26
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 113 1e-25
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 113 1e-25
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 113 1e-25
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 112 2e-25
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 2e-25
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 2e-25
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 3e-25
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 5e-25
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 5e-25
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 6e-25
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 7e-25
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 8e-25
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 8e-25
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 8e-25
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 9e-25
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 110 1e-24
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 1e-24
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 109 2e-24
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 4e-24
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 7e-24
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 9e-24
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-23
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 2e-23
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 3e-23
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 5e-23
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 5e-23
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 104 7e-23
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 8e-23
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 1e-22
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 4e-22
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 5e-22
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 101 5e-22
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 101 6e-22
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 9e-22
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 1e-21
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 1e-21
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 100 2e-21
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 2e-21
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 6e-21
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 7e-21
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 97 7e-21
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 8e-21
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 4e-20
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 6e-20
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 8e-20
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 3e-18
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 4e-18
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 7e-18
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 9e-18
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 9e-18
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 74 9e-14
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 73 2e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 3e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 1e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 70 1e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 70 2e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 8e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 8e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 9e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 9e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 1e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 66 2e-11
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 66 2e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 65 5e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 7e-11
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 62 5e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 5e-09
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 5e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 6e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 2e-08
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 56 2e-08
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 54 1e-07
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 9e-07
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 50 2e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 48 5e-06
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 48 5e-06
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 5e-06
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 9e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 1e-05
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/259 (48%), Positives = 170/259 (65%), Gaps = 3/259 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
MR+ GV P +HTFP LLK K +PF +A I K G D D F N+LIS +++SG
Sbjct: 95 MRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLF 154
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A ++FD + KD++ WTA+I+G+V+N SEA+ FV+M+ TG + +TVVSVL+AA
Sbjct: 155 DFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAA 214
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
D FG+ VHG Y++ GRV+ D ++ S+L+DMY KC DDA KVFDEMP R+VV
Sbjct: 215 GKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP--SRNVV 272
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
W+ L+AGYVQ F + VF ML +V PNE TL+SVLSACAH GAL +G+ VH Y+
Sbjct: 273 TWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM 332
Query: 241 ECKKVSLNSVELGTALVDM 259
+ +N+ GT L+D+
Sbjct: 333 IKNSIEINTTA-GTTLIDL 350
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 130/240 (54%), Gaps = 13/240 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM------IYAQIFKLGFDLDRFAGNALISAF 54
M++ GV ++ T +LK K VED +Y + ++ D+ F G++L+ +
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGK--VEDVRFGRSVHGLYLETGRVKCDV--FIGSSLVDMY 250
Query: 55 ANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
A +VFDE ++++ WTALI GYV++ + + F +M + + T+
Sbjct: 251 GKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLS 310
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
SVL A A G + G+ VH + ++ ++++ + L+D+Y KCG ++A VF+ +
Sbjct: 311 SVLSACAHVGALHRGRRVHCYMIK-NSIEINTTAGTTLIDLYVKCGCLEEAILVFERL-- 367
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
++V W+ ++ G+ +DA +F+ MLS +V PNE T +VLSACAH G +++G+
Sbjct: 368 HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGR 427
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 155/288 (53%), Gaps = 36/288 (12%)
Query: 5 GVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALIS----------- 52
G+ P+ +TFP +LK +K ++ I+ + KLG DLD + +LIS
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 53 --------------------AFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPS 92
+A+ G+I +A ++FDE VKD+++W A+I+GY +
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248
Query: 93 EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSAL 152
EAL+ F M T D T+V+V+ A A +G G+ VH ++ + + +AL
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH-LWIDDHGFGSNLKIVNAL 307
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
+D+Y KCG + AC +F+ +PY +DV+ W+ L+ GY N +++A+ +F ML P
Sbjct: 308 IDLYSKCGELETACGLFERLPY--KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 213 NEFTLTSVLSACAHSGALDQGKLVHQYIECK-KVSLNSVELGTALVDM 259
N+ T+ S+L ACAH GA+D G+ +H YI+ + K N+ L T+L+DM
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 135/262 (51%), Gaps = 34/262 (12%)
Query: 30 MIYAQIFKLGFDLDRFAGNALIS-AFANSGFIG--SACQVFDESSVKDIIAWTALINGYV 86
+I+AQ+ K+G +A + LI + F G A VF +++ W + G+
Sbjct: 51 IIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHA 110
Query: 87 KNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG 146
+ P ALK +V M S G ++ T VL++ A + G+ +HG ++ G LD
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG-CDLDL 169
Query: 147 YVWSALMDMYFKCGHCDDACKVFDEMPY----SY-------------------------R 177
YV ++L+ MY + G +DA KVFD+ P+ SY +
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DVV W+ +++GY + +++A+ +F +M+ NV P+E T+ +V+SACA SG+++ G+ VH
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+I+ N +++ AL+D+
Sbjct: 290 LWIDDHGFGSN-LKIVNALIDL 310
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 4/238 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + V PD+ T ++ ++ +E ++ I GF + NALI ++ G
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +AC +F+ KD+I+W LI GY +L EAL F +M +G + +T++S+L A
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 120 AAMAGDDNFGKWVHGFYVQAGR-VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A G + G+W+H + + + V + ++L+DMY KCG + A +VF+ + ++
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI--LHKS 434
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+ W+ ++ G+ + + +F M + P++ T +LSAC+HSG LD G+ +
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 149/283 (52%), Gaps = 32/283 (11%)
Query: 7 EPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
PD T+P+L K+ + + MI + KL +L NA I FA+ G + +A +
Sbjct: 153 RPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARK 212
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
VFDES V+D+++W LINGY K +A+ + M S G D +T++ ++ + +M GD
Sbjct: 213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGD 272
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP------------ 173
N GK + YV+ +++ + +ALMDM+ KCG +A ++FD +
Sbjct: 273 LNRGKEFYE-YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMIS 331
Query: 174 -----------------YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
+DVV W+ ++ G VQ + QDA+ +F M + N P+E T
Sbjct: 332 GYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Query: 217 LTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ LSAC+ GALD G +H+YIE +SLN V LGT+LVDM
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLN-VALGTSLVDM 433
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 11/227 (4%)
Query: 12 TFPL---LLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF 67
T PL L+ MFSK + + I+ + K + +IS +A G + + ++F
Sbjct: 291 TIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDVSRKLF 346
Query: 68 DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN 127
D+ KD++ W A+I G V+ +AL F +M+++ T D +T++ L A + G +
Sbjct: 347 DDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALD 406
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
G W+H Y++ + L+ + ++L+DMY KCG+ +A VF + R+ + ++ ++
Sbjct: 407 VGIWIHR-YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI--QTRNSLTYTAIIG 463
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
G AI F M+ + P+E T +LSAC H G + G+
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 125/234 (53%), Gaps = 9/234 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALIS--AFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
I AQ+ G LD FA + LI+ A + S ++ + ++ +I +W I G+ ++
Sbjct: 72 IQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSES 131
Query: 89 DLPSEALKCFVKMRSTG---TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
+ P E+ + +M G + D T + + A + G + G +V R++L
Sbjct: 132 ENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILG-HVLKLRLELV 190
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
+V +A + M+ CG ++A KVFDE P RD+V W+ L+ GY + + + AI V+ M
Sbjct: 191 SHVHNASIHMFASCGDMENARKVFDESP--VRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248
Query: 206 LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
S+ V P++ T+ ++S+C+ G L++GK ++Y++ + + ++ L AL+DM
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRM-TIPLVNALMDM 301
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 153/291 (52%), Gaps = 36/291 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK--PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
+R +G+ PD T P++LK + V+E ++ K G + D + N+L+ +A+ G
Sbjct: 37 LRGQGLYPDNFTLPVVLKSIGRLRKVIEGE-KVHGYAVKAGLEFDSYVSNSLMGMYASLG 95
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVL 117
I +VFDE +D+++W LI+ YV N +A+ F +M + + D T+VS L
Sbjct: 96 KIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTL 155
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP---- 173
A + + G+ ++ F V ++ + +AL+DM+ KCG D A VFD M
Sbjct: 156 SACSALKNLEIGERIYRFVVT--EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 174 -------YSY------------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+ Y +DVV W+ ++ GYVQ N+F +A+ +F M +
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ P+ F L S+L+ CA +GAL+QGK +H YI +V+++ V +GTALVDM
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKV-VGTALVDM 323
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 116/213 (54%), Gaps = 5/213 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
+++ + ++G I A +F+ S VKD++ WTA++NGYV+ + EAL+ F M++ G
Sbjct: 217 TSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D +VS+L A G GKW+HG Y+ RV +D V +AL+DMY KCG + A +
Sbjct: 277 PDNFVLVSLLTGCAQTGALEQGKWIHG-YINENRVTVDKVVGTALVDMYAKCGCIETALE 335
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF E+ RD W+ L+ G A+ +++ M + V + T +VL+AC H
Sbjct: 336 VFYEIKE--RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHG 393
Query: 228 GALDQG-KLVHQYIECKKVSLNSVELGTALVDM 259
G + +G K+ H E V S E + L+D+
Sbjct: 394 GFVAEGRKIFHSMTERHNVQPKS-EHCSCLIDL 425
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ PD LL ++ +E I+ I + +D+ G AL+ +A G
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I +A +VF E +D +WT+LI G N + AL + +M + G +DA+T V+VL A
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
G G+ + + VQ S L+D+ + G D+A ++ D+M
Sbjct: 390 CNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 147/260 (56%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M GVE D +TF + K FS V ++ I K GF GN+L++ + +
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA +VFDE + +D+I+W ++INGYV N L + L FV+M +G +D T+VSV
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A + + G+ VH V+A + D + + L+DMY KCG D A VF EM S R V
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKCGDLDSAKAVFREM--SDRSV 362
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V ++ ++AGY + +A+++F M + + P+ +T+T+VL+ CA LD+GK VH++
Sbjct: 363 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422
Query: 240 IECKKVSLNSVELGTALVDM 259
I+ + + + + AL+DM
Sbjct: 423 IKENDLGFD-IFVSNALMDM 441
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 9/237 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFK---LGFDLDRFAGNALISAFANS 57
M ++G+ PD +T +L ++ + D + K LGFD+ F NAL+ +A
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDI--FVSNALMDMYAKC 445
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF-VKMRSTGTGVDALTVVSV 116
G + A VF E VKDII+W +I GY KN +EAL F + + D TV V
Sbjct: 446 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A A + G+ +HG+ ++ G D +V ++L+DMY KCG A +FD++ +
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFS-DRHVANSLVDMYAKCGALLLAHMLFDDI--AS 562
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+D+V W+V++AGY ++AI +F M + +E + S+L AC+HSG +D+G
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 3/199 (1%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
GF +D G+ L + N G + A +VFDE ++ + W L+N K+ S ++ F
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
KM S+G +D+ T V ++ + + G+ +HGF +++G + + V ++L+ Y K
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS-VGNSLVAFYLK 242
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
D A KVFDEM + RDV+ W+ ++ GYV + + VF ML + + T+
Sbjct: 243 NQRVDSARKVFDEM--TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 219 SVLSACAHSGALDQGKLVH 237
SV + CA S + G+ VH
Sbjct: 301 SVFAGCADSRLISLGRAVH 319
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+ +K PD+ T +L S + I+ I + G+ DR N+L+ +A G
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +FD+ + KD+++WT +I GY + EA+ F +MR G D ++ VS+L A
Sbjct: 550 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ +G + G +++ ++ ++DM + G A + + MP D
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP-PDA 668
Query: 180 VCWSVLVAG 188
W L+ G
Sbjct: 669 TIWGALLCG 677
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+D T+ SVL+ A + GK V F G V +D + S L MY CG +A +
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFV-IDSNLGSKLSLMYTNCGDLKEASR 150
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VFDE+ + W++L+ + F +I +F M+S V + +T + V + +
Sbjct: 151 VFDEVKIE--KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 228 GALDQGKLVHQYI 240
++ G+ +H +I
Sbjct: 209 RSVHGGEQLHGFI 221
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 11/258 (4%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G PD TFP + K K + + I+ + K+GF D + N+L+ + G +A
Sbjct: 101 GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNA 160
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
C+VF E V+D+++WT +I G+ + L EAL F KM + T V VL ++
Sbjct: 161 CKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRV 217
Query: 124 GDDNFGKWVHGFYV-QAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
G + GK +HG + +A + L+ +AL+DMY KC DA +VF E+ +D V W
Sbjct: 218 GCLSLGKGIHGLILKRASLISLE--TGNALIDMYVKCEQLSDAMRVFGEL--EKKDKVSW 273
Query: 183 SVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
+ +++G V C + ++AI +F M S + P+ LTSVLSACA GA+D G+ VH+YI
Sbjct: 274 NSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYIL 333
Query: 242 CKKVSLNSVELGTALVDM 259
+ ++ +GTA+VDM
Sbjct: 334 TAGIKWDT-HIGTAIVDM 350
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 116/218 (53%), Gaps = 4/218 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ I K + GNALI + + A +VF E KD ++W ++I+G V +
Sbjct: 226 IHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCER 285
Query: 91 PSEALKCFVKMR-STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
EA+ F M+ S+G D + SVL A A G + G+WVH + + AG ++ D ++
Sbjct: 286 SKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG-IKWDTHIG 344
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+A++DMY KCG+ + A ++F+ + ++V W+ L+ G +++R F M+
Sbjct: 345 TAIVDMYAKCGYIETALEIFNGI--RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG 402
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL 247
PN T + L+AC H+G +D+G+ ++ ++ +L
Sbjct: 403 FKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNL 440
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 5 GVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G++PD H +L S V+ ++ I G D G A++ +A G+I +A
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
++F+ K++ W AL+ G + E+L+ F +M G + +T ++ L A
Sbjct: 361 LEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHT 420
Query: 124 G-DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
G D ++ H + + + ++D+ + G D+A ++ MP +C
Sbjct: 421 GLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICG 480
Query: 183 SVLVA 187
++L A
Sbjct: 481 AILSA 485
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 135/236 (57%), Gaps = 3/236 (1%)
Query: 24 VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALIN 83
++E+ +I+ K G D D + +L+ +A G + SA +VFDE V++ + W L+
Sbjct: 124 LLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMK 183
Query: 84 GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
GY+K E + F MR TG +DALT++ +++A GK VHG ++ +
Sbjct: 184 GYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFID 243
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
Y+ ++++DMY KC D+A K+F+ R+VV W+ L++G+ +C + +A +F
Sbjct: 244 QSDYLQASIIDMYVKCRLLDNARKLFE--TSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
ML ++++PN+ TL ++L +C+ G+L GK VH Y+ + +++V T+ +DM
Sbjct: 302 QMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNF-TSFIDM 356
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 105/185 (56%), Gaps = 3/185 (1%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
++I + + +A ++F+ S ++++ WT LI+G+ K + EA F +M
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
+ T+ ++L + + G GK VHG+ ++ G +++D +++ +DMY +CG+ A V
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG-IEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
FD MP R+V+ WS ++ + F++A+ F M S NVVPN T S+LSAC+HSG
Sbjct: 370 FDMMPE--RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
Query: 229 ALDQG 233
+ +G
Sbjct: 428 NVKEG 432
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 7/234 (2%)
Query: 8 PDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF 67
P LL + + ++A++ GF+ + G++L +A+ S + A F
Sbjct: 3 PVNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSF 62
Query: 68 DESSV--KDIIAWTALINGYVKNDLP--SEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+ ++ +W +++GY K+ S+ L + +MR GVD+ +V ++A
Sbjct: 63 NRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGL 122
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G G +HG ++ G + D YV +L++MY + G + A KVFDE+P R+ V W
Sbjct: 123 GLLENGILIHGLAMKNG-LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIP--VRNSVLWG 179
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
VL+ GY++ +K + R+F M + + TL ++ AC + A GK VH
Sbjct: 180 VLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVH 233
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Query: 1 MRQKGVEPDQHTFP-LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++ + P+Q T +L+ S + ++ + + G ++D + I +A G
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A VFD +++I+W+++IN + N L EAL CF KM+S +++T VS+L A
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 120 AAMAGDDNFG-KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+ +G+ G K G V + + ++ ++D+ + G +A D MP
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEEEH-YACMVDLLGRAGEIGEAKSFIDNMP 476
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 151/262 (57%), Gaps = 7/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ V PD TFP LLK S ++ ++AQ+F+LGFD D F N LI+ +A
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169
Query: 60 IGSACQVFDESSV--KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+GSA VF+ + + I++WTA+++ Y +N P EAL+ F +MR D + +VSVL
Sbjct: 170 LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A D G+ +H V+ G ++++ + +L MY KCG A +FD+M
Sbjct: 230 NAFTCLQDLKQGRSIHASVVKMG-LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP-- 286
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+++ W+ +++GY + ++AI +F M++ +V P+ ++TS +SACA G+L+Q + ++
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+Y+ + + V + +AL+DM
Sbjct: 347 EYV-GRSDYRDDVFISSALIDM 367
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 121/234 (51%), Gaps = 4/234 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ V+PD +L F+ ++ I+A + K+G +++ +L + +A G
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQ 272
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +A +FD+ ++I W A+I+GY KN EA+ F +M + D +++ S + A
Sbjct: 273 VATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISA 332
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G + ++ YV + D ++ SAL+DM+ KCG + A VFD RDV
Sbjct: 333 CAQVGSLEQARSMYE-YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT--LDRDV 389
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V WS ++ GY + ++AI ++ M V PN+ T +L AC HSG + +G
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 1/207 (0%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A++ LG F LI A ++ G I A QVFD+ I W A+I GY +N+
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNH 99
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL + M+ D+ T +L+A + G++VH + G D +V +
Sbjct: 100 FQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG-FDADVFVQN 158
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+ +Y KC A VF+ +P R +V W+ +V+ Y Q + +A+ +F M +V
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVH 237
P+ L SVL+A L QG+ +H
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIH 245
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGY 189
K +H + G +Q G++ + L+ G A +VFD++P + W+ ++ GY
Sbjct: 38 KQIHARLLVLG-LQFSGFLITKLIHASSSFGDITFARQVFDDLPRP--QIFPWNAIIRGY 94
Query: 190 VQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ N FQDA+ ++ NM V P+ FT +L AC+ L G+ VH +
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 10/199 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M K V PD + + ++ +E +Y + + + D F +ALI FA G
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS 373
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VFD + +D++ W+A+I GY + EA+ + M G + +T + +L A
Sbjct: 374 VEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 120 AAMAGDDNFGKWVHGFYVQAG--RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+G G W F+ + ++ ++ ++D+ + GH D A +V MP
Sbjct: 434 CNHSGMVREGWW---FFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ-P 489
Query: 178 DVVCWSVLVAGYVQCNKFQ 196
V W L++ C K +
Sbjct: 490 GVTVWGALLSA---CKKHR 505
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 137/269 (50%), Gaps = 40/269 (14%)
Query: 8 PDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD +TFP + K + V +A GF + F GNAL++ ++ + A +V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST-GTGVDALTVVSVLRAAAMAGD 125
FDE SV D+++W ++I Y K P AL+ F +M + G D +T+V+VL A G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
+ GK +H F V + +Q + +V + L+DMY KCG D+A VF M S +DVV W+ +
Sbjct: 245 HSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMMDEANTVFSNM--SVKDVVSWNAM 301
Query: 186 VAGYVQCNKFQDAIRVF--------------WN---------------------MLSDNV 210
VAGY Q +F+DA+R+F W+ MLS +
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQY 239
PNE TL SVLS CA GAL GK +H Y
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCY 390
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 12/229 (5%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFD---ESSVK-DIIAWTALINGYVKNDLPSEALKCF 98
D + NA+++ ++ G A ++F+ E +K D++ W+A I+GY + L EAL
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG-RVQLDGY-----VWSAL 152
+M S+G + +T++SVL A G GK +H + ++ ++ +G+ V + L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN--V 210
+DMY KC D A +FD + RDVV W+V++ GY Q A+ + M ++
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PN FT++ L ACA AL GK +H Y + + + + L+DM
Sbjct: 474 RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDM 522
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESSVK--DIIAWTALINGYVKNDLPSEALKCFVKM--RS 103
N LI +A + +A +FD S K D++ WT +I GY ++ ++AL+ +M
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD 163
T +A T+ L A A GK +H + ++ + + +V + L+DMY KCG
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
DA VFD M ++ V W+ L+ GY ++A+ +F M + TL VL A
Sbjct: 531 DARLVFDNM--MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 224 CAHSGALDQG 233
C+HSG +DQG
Sbjct: 589 CSHSGMIDQG 598
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F N LI +A G I A VFD K+ + WT+L+ GY + EAL F +MR
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 105 GTGVDALTVVSVLRAAAMA-----GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
G +D +T++ VL A + + G + F + F V G ++ L+D+ +
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH-----YACLVDLLGRA 628
Query: 160 GHCDDACKVFDEMPYSYRDVV 180
G + A ++ +EMP VV
Sbjct: 629 GRLNAALRLIEEMPMEPPPVV 649
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 133/236 (56%), Gaps = 6/236 (2%)
Query: 1 MRQKG-VEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
MR G VEPD HT+P L+K + V I++ + + GF + N+L+ +AN G
Sbjct: 111 MRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG 170
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ SA +VFD+ KD++AW ++ING+ +N P EAL + +M S G D T+VS+L
Sbjct: 171 DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLS 230
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A G GK VH + ++ G + + + + L+D+Y +CG ++A +FDEM ++
Sbjct: 231 ACAKIGALTLGKRVHVYMIKVGLTR-NLHSSNVLLDLYARCGRVEEAKTLFDEM--VDKN 287
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQG 233
V W+ L+ G ++AI +F M S + ++P E T +L AC+H G + +G
Sbjct: 288 SVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 343
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTG-TGVDALTVVSVLRAAAMAGDDNFGKWV 132
++ W LI GY + A + +MR +G D T +++A D G+ +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 133 HGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQC 192
H +++G L YV ++L+ +Y CG A KVFD+MP +D+V W+ ++ G+ +
Sbjct: 144 HSVVIRSGFGSLI-YVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNSVINGFAEN 200
Query: 193 NKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
K ++A+ ++ M S + P+ FT+ S+LSACA GAL GK VH Y+
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 145/260 (55%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGF 59
+R+ G+ TFPL+LK ++ + +++ + K GF+ D A +L+S ++ SG
Sbjct: 102 IRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGR 161
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A ++FDE + ++ WTAL +GY + EA+ F KM G D+ +V VL A
Sbjct: 162 LNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSA 221
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
GD + G+W+ Y++ +Q + +V + L+++Y KCG + A VFD M +D+
Sbjct: 222 CVHVGDLDSGEWIVK-YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMV--EKDI 278
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V WS ++ GY + ++ I +F ML +N+ P++F++ LS+CA GALD G+
Sbjct: 279 VTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISL 338
Query: 240 IECKKVSLNSVELGTALVDM 259
I+ + L ++ + AL+DM
Sbjct: 339 ID-RHEFLTNLFMANALIDM 357
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
+F + +I + +LING+V N L E L F+ +R G + T VL+A A
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
G +H V+ G D ++L+ +Y G +DA K+FDE+P R VV W+ L
Sbjct: 127 RKLGIDLHSLVVKCG-FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP--DRSVVTWTAL 183
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
+GY + ++AI +F M+ V P+ + + VLSAC H G LD G+ + +Y+E ++
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM 243
Query: 246 SLNSVELGTALVDM 259
NS + T LV++
Sbjct: 244 QKNSF-VRTTLVNL 256
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 10/263 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV----VEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M + GV+PD + ++++ S V ++ I + ++ + F L++ +A
Sbjct: 203 MVEMGVKPDSY---FIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAK 259
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G + A VFD KDI+ W+ +I GY N P E ++ F++M D ++V
Sbjct: 260 CGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGF 319
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L + A G + G+W + + ++ +AL+DMY KCG +VF EM
Sbjct: 320 LSSCASLGALDLGEWGISL-IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM--KE 376
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+D+V + ++G + + + VF + P+ T +L C H+G + G
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF 436
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
I C +VE +VD+
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDL 459
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 40 FDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFV 99
F + F NALI +A G + +VF E KDI+ A I+G KN + F
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG 403
Query: 100 KMRSTGTGVDALTVVSVLRAAAMAG--DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYF 157
+ G D T + +L AG D + V A + ++ Y ++D++
Sbjct: 404 QTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHY--GCMVDLWG 461
Query: 158 KCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
+ G DDA ++ +MP +V W L++G
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIV-WGALLSG 491
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 131/241 (54%), Gaps = 4/241 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
MR G+ PD++TFP LLK + D ++ FKLGFD D + G+ L+++++ +
Sbjct: 152 MRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSV 211
Query: 61 GSACQVFDESSVKD-IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A +VFDE +D + W AL+NGY + +AL F KMR G GV T+ SVL A
Sbjct: 212 EDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSA 271
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
++GD + G+ +HG V+ G D V +AL+DMY K ++A +F+ M RD+
Sbjct: 272 FTVSGDIDNGRSIHGLAVKTGSGS-DIVVSNALIDMYGKSKWLEEANSIFEAM--DERDL 328
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
W+ ++ + C + +F ML + P+ TLT+VL C +L QG+ +H Y
Sbjct: 329 FTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGY 388
Query: 240 I 240
+
Sbjct: 389 M 389
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 126/231 (54%), Gaps = 8/231 (3%)
Query: 31 IYAQIFKLGF-DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
I+ + + GF D AG +L++ +A G + A VF S +D+ + ALI+G+V N
Sbjct: 82 IHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFVVNG 140
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAA-AMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
P +A++ + +MR+ G D T S+L+ + AM D K VHG + G D YV
Sbjct: 141 SPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV--KKVHGLAFKLG-FDSDCYV 197
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
S L+ Y K +DA KVFDE+P D V W+ LV GY Q +F+DA+ VF M +
Sbjct: 198 GSGLVTSYSKFMSVEDAQKVFDELP-DRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE 256
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V + T+TSVLSA SG +D G+ +H + K S + + + AL+DM
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNGRSIHG-LAVKTGSGSDIVVSNALIDM 306
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 121/240 (50%), Gaps = 10/240 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR++GV +HT +L F+ +++ I+ K G D NALI + S +
Sbjct: 253 MREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKW 312
Query: 60 IGSACQVFDESSVKDIIAWTAL--INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ A +F+ +D+ W ++ ++ Y + + AL F +M +G D +T+ +VL
Sbjct: 313 LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLAL--FERMLCSGIRPDIVTLTTVL 370
Query: 118 RAAAMAGDDNFGKWVHGFYVQAG---RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
G+ +HG+ + +G R + ++ ++LMDMY KCG DA VFD M
Sbjct: 371 PTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSM-- 428
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+D W++++ GY + + A+ +F M V P+E T +L AC+HSG L++G+
Sbjct: 429 RVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGR 488
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 112 TVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
T ++ L+ A D G+ +HGF V+ G + ++L++MY KCG A VF
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 172 MPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
S RDV ++ L++G+V DA+ + M ++ ++P+++T S+L
Sbjct: 122 ---SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG 170
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
+ F N+L+ + G + A VFD VKD +W +INGY AL F M
Sbjct: 401 NEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMC 460
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G D +T V +L+A + +G N G+ + ++ ++DM +
Sbjct: 461 RAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKL 520
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
++A ++ P VV S+L + + NK
Sbjct: 521 EEAYELAISKPICDNPVVWRSILSSCRLHGNK 552
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 145/283 (51%), Gaps = 33/283 (11%)
Query: 8 PDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
P+++TFP L+K ++ + ++ K D F N+LI + + G + SAC+V
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
F KD+++W ++ING+V+ P +AL+ F KM S +T+V VL A A +
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP------------- 173
FG+ V Y++ RV ++ + +A++DMY KCG +DA ++FD M
Sbjct: 249 EFGRQVCS-YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 174 ----------------YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFT 216
+D+V W+ L++ Y Q K +A+ VF + L N+ N+ T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 217 LTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L S LSACA GAL+ G+ +H YI+ + +N + +AL+ M
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMN-FHVTSALIHM 409
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 123/226 (54%), Gaps = 10/226 (4%)
Query: 16 LLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD 74
+L M++K +ED ++F + D ++ +A S +A +V + KD
Sbjct: 273 MLDMYTKCGSIEDA----KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMR-STGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
I+AW ALI+ Y +N P+EAL F +++ ++ +T+VS L A A G G+W+H
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 134 GFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
Y++ ++++ +V SAL+ MY KCG + + +VF+ + RDV WS ++ G
Sbjct: 389 S-YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAMHG 445
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK-LVHQ 238
+A+ +F+ M NV PN T T+V AC+H+G +D+ + L HQ
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 118/231 (51%), Gaps = 8/231 (3%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
MI F + + A +S+FA+ + A +VFDE + AW LI Y
Sbjct: 53 MIRTGTFSDPYSASKLFAMAALSSFASLEY---ARKVFDEIPKPNSFAWNTLIRAYASGP 109
Query: 90 LPSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
P ++ F+ M S + T +++AAA + G+ +HG V++ V D +V
Sbjct: 110 DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA-VGSDVFV 168
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
++L+ YF CG D ACKVF + +DVV W+ ++ G+VQ A+ +F M S+
Sbjct: 169 ANSLIHCYFSCGDLDSACKVFTTI--KEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+V + T+ VLSACA L+ G+ V YIE +V++N + L A++DM
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN-LTLANAMLDM 276
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I++ I K G ++ +ALI ++ G + + +VF+ +D+ W+A+I G +
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGC 446
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG-DDNFGKWVHGFYVQAGRVQLDGYVW 149
+EA+ F KM+ + +T +V A + G D H G V + + +
Sbjct: 447 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH-Y 505
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
+ ++D+ + G+ + A K + MP V ++L A + N
Sbjct: 506 ACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 131/235 (55%), Gaps = 8/235 (3%)
Query: 3 QKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
+ G+ PD +TFP LLK + +E+ ++ KLG D + + LI+ + +
Sbjct: 122 EDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVD 181
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
SA VFD ++ + A+I GY + + P+EAL F +M+ + +T++SVL + A
Sbjct: 182 SARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCA 241
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVW--SALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G + GKW+H + A + YV +AL+DM+ KCG DDA +F++M Y+D
Sbjct: 242 LLGSLDLGKWIHKY---AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM--RYKDT 296
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
WS ++ Y K + ++ +F M S+NV P+E T +L+AC+H+G +++G+
Sbjct: 297 QAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGR 351
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 108/201 (53%), Gaps = 12/201 (5%)
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A +F+ S DI+ + ++ GY + P E FV++ G D T S+L+A A+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
A G+ +H ++ G + + YV L++MY +C D A VFD + VVC+
Sbjct: 142 AKALEEGRQLHCLSMKLG-LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC--VVCY 198
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE- 241
+ ++ GY + N+ +A+ +F M + PNE TL SVLS+CA G+LD GK +H+Y +
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 242 ---CKKVSLNSVELGTALVDM 259
CK V +N TAL+DM
Sbjct: 259 HSFCKYVKVN-----TALIDM 274
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 140/261 (53%), Gaps = 5/261 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M V P +TF ++K + + ++ GF LD + AL++ ++ G
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A QVFD K I+AW +L++G+ +N L EA++ F +MR +G D+ T VS+L A
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G + G WVH + + G + L+ + +AL+++Y +CG A +VFD+M + +V
Sbjct: 218 CAQTGAVSLGSWVHQYIISEG-LDLNVKLGTALINLYSRCGDVGKAREVFDKMKET--NV 274
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
W+ +++ Y Q A+ +F M D +PN T +VLSACAH+G +++G+ V++
Sbjct: 275 AAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
Query: 239 YIECKKVSLNSVELGTALVDM 259
+ + VE +VDM
Sbjct: 335 RMTKSYRLIPGVEHHVCMVDM 355
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 141/265 (53%), Gaps = 35/265 (13%)
Query: 9 DQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFA------------ 55
+ +TFP LLK S E+ I+AQI KLG++ D +A N+LI+++A
Sbjct: 114 NAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLF 173
Query: 56 -------------------NSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
+G + A +F + + K+ I+WT +I+GYV+ D+ EAL+
Sbjct: 174 DRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQ 233
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
F +M+++ D +++ + L A A G GKW+H Y+ R+++D + L+DMY
Sbjct: 234 LFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHS-YLNKTRIRMDSVLGCVLIDMY 292
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
KCG ++A +VF + + V W+ L++GY ++AI F M + PN T
Sbjct: 293 AKCGEMEEALEVFKNI--KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 217 LTSVLSACAHSGALDQGKLVHQYIE 241
T+VL+AC+++G +++GKL+ +E
Sbjct: 351 FTAVLTACSYTGLVEEGKLIFYSME 375
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 128/267 (47%), Gaps = 36/267 (13%)
Query: 26 EDPFMIYAQIFKLGFDLDRFAGNALIS---AFANSGFIGSACQVFDESSVKDIIAWTALI 82
E+ I+A++ K G D +A +S + +S F+ A VFD D W +I
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 83 NGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH------GF- 135
G+ +D P +L + +M + +A T S+L+A + +H G+
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 136 ------------YVQAGRVQL-----------DGYVWSALMDMYFKCGHCDDACKVFDEM 172
Y G +L D W++++ Y K G D A +F +M
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 173 PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
+ ++ + W+ +++GYVQ + ++A+++F M + +V P+ +L + LSACA GAL+Q
Sbjct: 208 --AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 233 GKLVHQYIECKKVSLNSVELGTALVDM 259
GK +H Y+ ++ ++SV LG L+DM
Sbjct: 266 GKWIHSYLNKTRIRMDSV-LGCVLIDM 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ VEPD + L ++ +E I++ + K +D G LI +A G
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VF K + AWTALI+GY + EA+ F++M+ G + +T +VL A
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ G GK + FY L + + ++D+ + G D+A + EMP
Sbjct: 358 CSYTGLVEEGKLI--FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 415
Query: 178 DVVCWSVLVAGYVQCN 193
V+ ++L A + N
Sbjct: 416 AVIWGALLKACRIHKN 431
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 140/257 (54%), Gaps = 7/257 (2%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
GV+PD +TFP +L+ P + ++ + + G++LD NALI+ + G + SA
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+FD +DII+W A+I+GY +N + E L+ F MR D +T+ SV+ A +
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
GD G+ +H + + G +D V ++L MY G +A K+F M +D+V W+
Sbjct: 311 GDRRLGRDIHAYVITTG-FAVDISVCNSLTQMYLNAGSWREAEKLFSRM--ERKDIVSWT 367
Query: 184 VLVAGYVQCNKFQD-AIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
+++GY + N D AI + M D+V P+E T+ +VLSACA G LD G +H+ +
Sbjct: 368 TMISGY-EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK-LAI 425
Query: 243 KKVSLNSVELGTALVDM 259
K ++ V + L++M
Sbjct: 426 KARLISYVIVANNLINM 442
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 124/247 (50%), Gaps = 15/247 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYA----QIFKLGFDLDRFAGNALISAFA 55
M++ V D+ F L+++ K E+ +Y+ + LG +L GNA ++ F
Sbjct: 85 MQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL----GNAFLAMFV 140
Query: 56 NSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV--DALTV 113
G + A VF + S +++ +W L+ GY K EA+ + +M G GV D T
Sbjct: 141 RFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG-GVKPDVYTF 199
Query: 114 VSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
VLR D GK VH V+ G +LD V +AL+ MY KCG A +FD MP
Sbjct: 200 PCVLRTCGGIPDLARGKEVHVHVVRYG-YELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
RD++ W+ +++GY + + + +F+ M +V P+ TLTSV+SAC G G
Sbjct: 259 --RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 234 KLVHQYI 240
+ +H Y+
Sbjct: 317 RDIHAYV 323
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 47 GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
N LI+ ++ I A +F K++I+WT++I G N+ EAL +M+ T
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-L 494
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
+A+T+ + L A A G GK +H ++ G V LD ++ +AL+DMY +CG + A
Sbjct: 495 QPNAITLTAALAACARIGALMCGKEIHAHVLRTG-VGLDDFLPNALLDMYVRCGRMNTAW 553
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
F+ +DV W++L+ GY + + + +F M+ V P+E T S+L C+
Sbjct: 554 SQFNSQK---KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 227 SGALDQGKLVHQYIECKKVSLN 248
S + QG + +E V+ N
Sbjct: 611 SQMVRQGLMYFSKMEDYGVTPN 632
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 145/292 (49%), Gaps = 37/292 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP--VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M ++GV PD HTFP LL + + ++ + K G + + NAL+ ++ G
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A VFD +D+ +W +I+GY + E+++ V+M ++T++ VL
Sbjct: 185 LMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLS 244
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVF--------- 169
A + D + K VH YV + + + +AL++ Y CG D A ++F
Sbjct: 245 ACSKVKDKDLCKRVHE-YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
Query: 170 ----------------------DEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
D+MP RD + W++++ GY++ F +++ +F M S
Sbjct: 304 SWTSIVKGYVERGNLKLARTYFDQMPV--RDRISWTIMIDGYLRAGCFNESLEIFREMQS 361
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
++P+EFT+ SVL+ACAH G+L+ G+ + YI+ K+ N V +G AL+DM
Sbjct: 362 AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIK-NDVVVGNALIDM 412
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 116/204 (56%), Gaps = 3/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I +IF+ D + +++ + G + A FD+ V+D I+WT +I+GY++
Sbjct: 289 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 348
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+E+L+ F +M+S G D T+VSVL A A G G+W+ Y+ +++ D V +
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKT-YIDKNKIKNDVVVGN 407
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMYFKCG + A KVF +M RD W+ +V G + Q+AI+VF+ M ++
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDM--DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSI 465
Query: 211 VPNEFTLTSVLSACAHSGALDQGK 234
P++ T VLSAC HSG +DQ +
Sbjct: 466 QPDDITYLGVLSACNHSGMVDQAR 489
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + A ++F + D++ W +I G+ K D E ++ ++ M G D+ T +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 118 RAAAMAGDD-NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
G GK +H V+ G + + YV +AL+ MY CG D A VFD
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFG-LGSNLYVQNALVKMYSLCGLMDMARGVFDRR--CK 198
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
DV W+++++GY + +++++I + M + V P TL VLSAC+ D K V
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 237 HQYI-ECKKVSLNSVELGTALVD 258
H+Y+ ECK + S+ L ALV+
Sbjct: 259 HEYVSECK--TEPSLRLENALVN 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 2/189 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ PD+ T +L + +E I I K D GNALI + G
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGC 418
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A +VF + +D WTA++ G N EA+K F +M+ D +T + VL A
Sbjct: 419 SEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+G + + R++ + ++DM + G +A ++ +MP + +
Sbjct: 479 CNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSI 538
Query: 180 VCWSVLVAG 188
V W L+
Sbjct: 539 V-WGALLGA 546
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 130/234 (55%), Gaps = 4/234 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR + + P TF LL+ S + I+ +FK G +LD FAG+ALI ++N
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC 504
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + VFDE VKD++ W ++ GYV+ EAL F++++ + D T +++ A
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTA 564
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G+ H ++ G ++ + Y+ +AL+DMY KCG +DA K FD + RDV
Sbjct: 565 AGNLASVQLGQEFHCQLLKRG-LECNPYITNALLDMYAKCGSPEDAHKAFDSA--ASRDV 621
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
VCW+ +++ Y + + A+++ M+S+ + PN T VLSAC+H+G ++ G
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG 675
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 136/263 (51%), Gaps = 8/263 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+ + V PD + +L S P +E I+A I + G ++D N LI ++ G
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +A ++F+ K+II+WT L++GY +N L EA++ F M G D S+L +
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A FG VH + ++A + D YV ++L+DMY KC DA KVFD ++ DV
Sbjct: 360 CASLHALGFGTQVHAYTIKAN-LGNDSYVTNSLIDMYAKCDCLTDARKVFD--IFAAADV 416
Query: 180 VCWSVLVAGYVQCN---KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
V ++ ++ GY + + +A+ +F +M + P+ T S+L A A +L K +
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H + ++L+ + G+AL+D+
Sbjct: 477 HGLMFKYGLNLD-IFAGSALIDV 498
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 124/216 (57%), Gaps = 10/216 (4%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+++ QI G +LD + N LI+ ++ +G + A +VF++ +++++W+ +++ +
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 90 LPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKW----VHGFYVQAGRVQL 144
+ E+L F++ R+ + + S ++A +G D G+W + F V++G
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSG-FDR 181
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D YV + L+D Y K G+ D A VFD +P + V W+ +++G V+ + ++++F+
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALP--EKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
++ DNVVP+ + L++VLSAC+ L+ GK +H +I
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI 275
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 6/232 (2%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
F + + + K GFD D + G LI + G I A VFD K + WT +I+G VK
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKM 227
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
+L+ F ++ D + +VL A ++ GK +H ++ G +++D +
Sbjct: 228 GRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG-LEMDASL 286
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+ L+D Y KCG A K+F+ MP ++++ W+ L++GY Q ++A+ +F +M
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMP--NKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL-NSVELGTALVDM 259
+ P+ + +S+L++CA AL G VH Y K +L N + +L+DM
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAY--TIKANLGNDSYVTNSLIDM 394
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 129/263 (49%), Gaps = 8/263 (3%)
Query: 1 MRQKGVEPDQHT-FPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G++PD + +L S + ++A K D + N+LI +A
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLP---SEALKCFVKMRSTGTGVDALTVVSV 116
+ A +VFD + D++ + A+I GY + EAL F MR LT VS+
Sbjct: 401 LTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSL 460
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
LRA+A K +HG + G + LD + SAL+D+Y C D+ VFDEM
Sbjct: 461 LRASASLTSLGLSKQIHGLMFKYG-LNLDIFAGSALIDVYSNCYCLKDSRLVFDEM--KV 517
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+D+V W+ + AGYVQ ++ ++A+ +F + P+EFT ++++A + ++ G+
Sbjct: 518 KDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEF 577
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H + + + N + AL+DM
Sbjct: 578 HCQLLKRGLECNPY-ITNALLDM 599
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 145/261 (55%), Gaps = 7/261 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G++PD+ T+ + +K + +++ +FK+G + D ++LI +A G
Sbjct: 123 MKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQ 182
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+G A ++FDE + +D ++W ++I+GY + +A+ F KM G D T+VS+L A
Sbjct: 183 VGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGA 242
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ GD G+ + + ++ L ++ S L+ MY KCG D A +VF++M +D
Sbjct: 243 CSHLGDLRTGRLLEEMAI-TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI--KKDR 299
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++ Y Q K +A ++F+ M V P+ TL++VLSAC GAL+ GK + +
Sbjct: 300 VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETH 359
Query: 240 IECKKVSL-NSVELGTALVDM 259
++SL +++ + T LVDM
Sbjct: 360 --ASELSLQHNIYVATGLVDM 378
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 126/240 (52%), Gaps = 19/240 (7%)
Query: 1 MRQKGVEPDQHTFPLLL-------KMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISA 53
M ++G EPD+ T +L + + ++E+ A K+G L F G+ LIS
Sbjct: 224 MEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEE----MAITKKIG--LSTFLGSKLISM 277
Query: 54 FANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTV 113
+ G + SA +VF++ KD +AWTA+I Y +N SEA K F +M TG DA T+
Sbjct: 278 YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTL 337
Query: 114 VSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+VL A G GK + + +Q + YV + L+DMY KCG ++A +VF+ MP
Sbjct: 338 STVLSACGSVGALELGKQIET-HASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++ W+ ++ Y ++A+ +F M +V P++ T VLSAC H+G + QG
Sbjct: 397 --VKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQG 451
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 134/261 (51%), Gaps = 39/261 (14%)
Query: 6 VEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+ P++ TF LLK S + +I+ + K G +D + L+ +A G + SA +
Sbjct: 126 INPNEFTFSSLLKSCS---TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQK 182
Query: 66 VFD---ESSV----------------------------KDIIAWTALINGYVKNDLPSEA 94
VFD E S+ +DI++W +I+GY ++ P++A
Sbjct: 183 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 242
Query: 95 LKCFVKMRSTGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
L F K+ + G D +TVV+ L A + G G+W+H F V++ R++L+ V + L+
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF-VKSSRIRLNVKVCTGLI 301
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVP 212
DMY KCG ++A VF++ P +D+V W+ ++AGY QDA+R+F M + P
Sbjct: 302 DMYSKCGSLEEAVLVFNDTP--RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQP 359
Query: 213 NEFTLTSVLSACAHSGALDQG 233
+ T L ACAH+G +++G
Sbjct: 360 TDITFIGTLQACAHAGLVNEG 380
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 39/268 (14%)
Query: 25 VEDPFMIYAQIFKLGFDLD-RFA--GNALISAFANSGFIGSACQVFDESSVKDIIAWTAL 81
V++ I+A I + L R+ L A+A+ G I + +F ++ D+ +TA
Sbjct: 42 VDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAA 101
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
IN N L +A +V++ S+ + T S+L++ + GK +H ++ G
Sbjct: 102 INTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFG- 156
Query: 142 VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY------------------------- 176
+ +D YV + L+D+Y K G A KVFD MP
Sbjct: 157 LGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFD 216
Query: 177 ----RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALD 231
RD+V W+V++ GY Q DA+ +F +L++ P+E T+ + LSAC+ GAL+
Sbjct: 217 SMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALE 276
Query: 232 QGKLVHQYIECKKVSLNSVELGTALVDM 259
G+ +H +++ ++ LN V++ T L+DM
Sbjct: 277 TGRWIHVFVKSSRIRLN-VKVCTGLIDM 303
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 130/243 (53%), Gaps = 5/243 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLD-RFAGNALISAFANSG 58
M +GV P + TF +++ KP + + QI K GF + + G +L+ + NS
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Query: 59 FIGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ AC +F E SS K I+ WT +++G+ +N EALK + +MR G D T V+VL
Sbjct: 680 GMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL 739
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
R ++ G+ +H LD + L+DMY KCG + +VFDEM
Sbjct: 740 RVCSVLSSLREGRAIHSLIFHLAH-DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR-S 797
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+VV W+ L+ GY + +DA+++F +M +++P+E T VL+AC+H+G + G+ +
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIF 857
Query: 238 QYI 240
+ +
Sbjct: 858 EMM 860
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 131/263 (49%), Gaps = 11/263 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ V+ + T +L D +++A+ KLG + + G++L+S ++
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +A +VF+ K+ + W A+I GY N + ++ F+ M+S+G +D T S+L
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A + D G H ++ ++ + +V +AL+DMY KCG +DA ++F+ M RD
Sbjct: 438 CAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIFERM--CDRDN 494
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++ YVQ +A +F M +V + L S L AC H L QGK VH
Sbjct: 495 VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH-- 552
Query: 240 IECKKVSL---NSVELGTALVDM 259
C V + G++L+DM
Sbjct: 553 --CLSVKCGLDRDLHTGSSLIDM 573
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 5/255 (1%)
Query: 6 VEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
V+P+ + L + K + E+ +++ ++ G D A +I+ + G + A
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
+F E S D++AW +I+G+ K + A++ F MR + T+ SVL A +
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
+ + G VH ++ G + + YV S+L+ MY KC + A KVF+ + ++ V W+
Sbjct: 342 NLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSKCEKMEAAAKVFEAL--EEKNDVFWNA 398
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKK 244
++ GY + + +F +M S ++FT TS+LS CA S L+ G H I KK
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 245 VSLNSVELGTALVDM 259
++ N + +G ALVDM
Sbjct: 459 LAKN-LFVGNALVDM 472
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 2/204 (0%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
K G D D G++LI ++ G I A +VF +++ ALI GY +N+L EA+
Sbjct: 557 KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVV 615
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
F +M + G +T +++ A G HG + G Y+ +L+ MY
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
+AC +F E+ S + +V W+ +++G+ Q +++A++ + M D V+P++ T
Sbjct: 676 MNSRGMTEACALFSELS-SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 217 LTSVLSACAHSGALDQGKLVHQYI 240
+VL C+ +L +G+ +H I
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLI 758
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 116/254 (45%), Gaps = 42/254 (16%)
Query: 8 PDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
P++ TF ++L ++ VE I+ + K+G + + + G AL+ +A I A +V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
F+ + + WT L +GYVK LP EA+ F +MR G D L V+V+
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI--------- 268
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
+ Y + G DA +F EM S DVV W+V++
Sbjct: 269 ---------------------------NTYIRLGKLKDARLLFGEM--SSPDVVAWNVMI 299
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
+G+ + AI F+NM +V TL SVLSA LD G +VH E K+
Sbjct: 300 SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHA--EAIKLG 357
Query: 247 LNS-VELGTALVDM 259
L S + +G++LV M
Sbjct: 358 LASNIYVGSSLVSM 371
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 8/208 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++++ LG D + GNA++ +A + A + FD KD+ AW ++++ Y
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGK 140
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P + L+ FV + + T VL A + FG+ +H ++ G ++ + Y
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG-LERNSYCGG 199
Query: 151 ALMDMYFKCGHCDDACKVFDEM--PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
AL+DMY KC DA +VF+ + P + VCW+ L +GYV+ ++A+ VF M +
Sbjct: 200 ALVDMYAKCDRISDARRVFEWIVDP----NTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLV 236
P+ +V++ G L +L+
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLL 283
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
GK VH + G + +G + +A++D+Y KC A K FD + +DV W+ ++
Sbjct: 77 RIGKAVHSKSLILG-IDSEGRLGNAIVDLYAKCAQVSYAEKQFD---FLEKDVTAWNSML 132
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
+ Y K +R F ++ + + PN+FT + VLS CA ++ G+ +H + +
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 247 LNSVELGTALVDM 259
NS G ALVDM
Sbjct: 193 RNSY-CGGALVDM 204
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 138/244 (56%), Gaps = 11/244 (4%)
Query: 1 MRQKGVEPDQHTFPLLLK----MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
+R+ V PD++TFP ++K +F + + ++Y QI +GF+ D F GNAL+ ++
Sbjct: 97 LRESKVSPDKYTFPSVIKACAGLFDAEMGD---LVYEQILDMGFESDLFVGNALVDMYSR 153
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G + A QVFDE V+D+++W +LI+GY + EAL+ + +++++ D+ TV SV
Sbjct: 154 MGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSV 213
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A G+ +HGF +++G + + L+ MY K DA +VFDEM
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN-NGLVAMYLKFRRPTDARRVFDEM--DV 270
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
RD V ++ ++ GY++ ++++R+F L D P+ T++SVL AC H L K +
Sbjct: 271 RDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYI 329
Query: 237 HQYI 240
+ Y+
Sbjct: 330 YNYM 333
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 10/232 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
IY + K GF L+ N LI +A G + +A VF+ KD ++W ++I+GY+++
Sbjct: 329 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGD 388
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA+K F M D +T + ++ + D FGK +H +++G + +D V +
Sbjct: 389 LMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG-ICIDLSVSN 447
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMY KCG D+ K+F M D V W+ +++ V+ F ++V M V
Sbjct: 448 ALIDMYAKCGEVGDSLKIFSSMGTG--DTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL---NSVELGTALVDM 259
VP+ T L CA A GK +H C + + +++G AL++M
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIH----CCLLRFGYESELQIGNALIEM 553
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 4/210 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE-SSVKDIIAWTALINGYVKND 89
I+A + LG D F LI +++ S+ VF S K++ W ++I + KN
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
L EAL+ + K+R + D T SV++A A D G V+ + G + D +V
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG-FESDLFVG 144
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL+DMY + G A +VFDEMP RD+V W+ L++GY +++A+ ++ + +
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMP--VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+VP+ FT++SVL A + + QG+ +H +
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGF 232
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++ K G +D NALI +A G +G + ++F D + W +I+ V+
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+ L+ +MR + D T + L A GK +H ++ G + + + +
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFG-YESELQIGN 548
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL++MY KCG +++ +VF+ M S RDVV W+ ++ Y + + A+ F +M +
Sbjct: 549 ALIEMYSKCGCLENSSRVFERM--SRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
VP+ +++ AC+HSG +D+G
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEG 629
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 105/197 (53%), Gaps = 5/197 (2%)
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A +VFDE V+D +++ +I GY+K ++ E+++ F++ D LTV SVLRA
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKP-DLLTVSSVLRACGH 319
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
D + K+++ + ++AG V L+ V + L+D+Y KCG A VF+ M +D V W
Sbjct: 320 LRDLSLAKYIYNYMLKAGFV-LESTVRNILIDVYAKCGDMITARDVFNSM--ECKDTVSW 376
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
+ +++GY+Q +A+++F M+ + T ++S L GK +H
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK 436
Query: 243 KKVSLNSVELGTALVDM 259
+ ++ + + AL+DM
Sbjct: 437 SGICID-LSVSNALIDM 452
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 121/256 (47%), Gaps = 17/256 (6%)
Query: 1 MRQKGVEPDQHTF----PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
MR+ V PD TF P+ + +K + ++ I+ + + G++ + GNALI ++
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKE---IHCCLLRFGYESELQIGNALIEMYSK 556
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G + ++ +VF+ S +D++ WT +I Y +AL+ F M +G D++ +++
Sbjct: 557 CGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAI 616
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDACKVFDEMPY 174
+ A + +G + G + F ++D + ++ ++D+ + A + MP
Sbjct: 617 IYACSHSGLVDEG--LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPI 674
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL--DQ 232
D W+ ++ + A RV ++ N P++ S+L++ A++ D+
Sbjct: 675 K-PDASIWASVLRACRTSGDMETAERVSRRIIELN--PDDPGY-SILASNAYAALRKWDK 730
Query: 233 GKLVHQYIECKKVSLN 248
L+ + ++ K ++ N
Sbjct: 731 VSLIRKSLKDKHITKN 746
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+++A I + F D GN L++ +A G + A +VF++ +D + WT LI+GY ++D
Sbjct: 81 IVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHD 140
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
P +AL F +M G + T+ SV++AAA G +HGF V+ G + +V
Sbjct: 141 RPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG-FDSNVHVG 199
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
SAL+D+Y + G DDA VFD + R+ V W+ L+AG+ + + + A+ +F ML D
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDAL--ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
P+ F+ S+ AC+ +G L+QGK VH Y+
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 105/197 (53%), Gaps = 3/197 (1%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
K GFD + G+AL+ + G + A VFD ++ ++W ALI G+ + +AL+
Sbjct: 189 KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALE 248
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
F M G + S+ A + G GKWVH + +++G +L + + L+DMY
Sbjct: 249 LFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE-KLVAFAGNTLLDMY 307
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
K G DA K+FD + + RDVV W+ L+ Y Q ++A+ F M + PNE +
Sbjct: 308 AKSGSIHDARKIFDRL--AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 217 LTSVLSACAHSGALDQG 233
SVL+AC+HSG LD+G
Sbjct: 366 FLSVLTACSHSGLLDEG 382
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G P ++ L S +E ++A + K G L FAGN L+ +A SG
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A ++FD + +D+++W +L+ Y ++ EA+ F +MR G + ++ +SVL A
Sbjct: 313 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA 372
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+ +G + G W + ++ + + + + ++D+ + G + A + +EMP
Sbjct: 373 CSHSGLLDEG-WHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 132/264 (50%), Gaps = 37/264 (14%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGF-------------------- 40
M V PD + +LK V + I+AQ+ KLGF
Sbjct: 118 MIHNSVLPDNYVITSVLKACDLKVCRE---IHAQVLKLGFGSSRSVGLKMMEIYGKSGEL 174
Query: 41 -----------DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
D D A +I+ ++ GFI A ++F + +KD + WTA+I+G V+N
Sbjct: 175 VNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNK 234
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
++AL+ F +M+ + T V VL A + G G+WVH F V+ R++L +V
Sbjct: 235 EMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSF-VENQRMELSNFVG 293
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL++MY +CG ++A +VF M +DV+ ++ +++G +AI F +M++
Sbjct: 294 NALINMYSRCGDINEARRVFRVM--RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG 351
Query: 210 VVPNEFTLTSVLSACAHSGALDQG 233
PN+ TL ++L+AC+H G LD G
Sbjct: 352 FRPNQVTLVALLNACSHGGLLDIG 375
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 35/258 (13%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A+I + D D F LI + + A VF S ++ +TA+I+G+V +
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++ + + +M D + SVL+A D + +H ++ G V
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLG-FGSSRSVGL 162
Query: 151 ALMDMYFKCGHCDDACKVFDEMP-------------YS----------------YRDVVC 181
+M++Y K G +A K+FDEMP YS +D VC
Sbjct: 163 KMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVC 222
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
W+ ++ G V+ + A+ +F M +NV NEFT VLSAC+ GAL+ G+ VH ++E
Sbjct: 223 WTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVE 282
Query: 242 CKKVSLNSVELGTALVDM 259
+++ L++ +G AL++M
Sbjct: 283 NQRMELSNF-VGNALINM 299
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 141/261 (54%), Gaps = 6/261 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR G+ PDQ TF L + +E M++ QI K GFD+D ALI+ + G
Sbjct: 236 MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGK 295
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
++ +V + KD++ WT +I+G ++ +AL F +M +G+ + + + SV+ +
Sbjct: 296 EEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVAS 355
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G + G VHG+ ++ G LD ++L+ MY KCGH D + +F+ M + RD+
Sbjct: 356 CAQLGSFDLGASVHGYVLRHGYT-LDTPALNSLITMYAKCGHLDKSLVIFERM--NERDL 412
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP-NEFTLTSVLSACAHSGALDQGKLVHQ 238
V W+ +++GY Q A+ +F M V + FT+ S+L AC+ +GAL GKL+H
Sbjct: 413 VSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHC 472
Query: 239 YIECKKVSLNSVELGTALVDM 259
+ + S+ + TALVDM
Sbjct: 473 IVIRSFIRPCSL-VDTALVDM 492
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + G+ LD A N+LI+ +A G + + +F+ + +D+++W A+I+GY +N
Sbjct: 368 VHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVD 427
Query: 91 PSEALKCFVKMR-STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+AL F +M+ T VD+ TVVS+L+A + AG GK +H +++ ++ V
Sbjct: 428 LCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRS-FIRPCSLVD 486
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL+DMY KCG+ + A + FD + S++DVV W +L+AGY K A+ ++ L
Sbjct: 487 TALVDMYSKCGYLEAAQRCFDSI--SWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 210 VVPNEFTLTSVLSACAHSGALDQG 233
+ PN +VLS+C+H+G + QG
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQG 568
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 134/259 (51%), Gaps = 9/259 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKL--GFDLDRFAGNALISAFANSG 58
MR +G++P T LL+M S V+E + F + GFD D N++++ +
Sbjct: 138 MRFQGIKPGPVT---LLEMLS-GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCD 193
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+G A +FD+ +D+++W +I+GY SE LK +MR G D T + L
Sbjct: 194 HVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ D G+ +H V+ G +D ++ +AL+ MY KCG + + +V + +P +D
Sbjct: 254 VSGTMCDLEMGRMLHCQIVKTG-FDVDMHLKTALITMYLKCGKEEASYRVLETIP--NKD 310
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
VVCW+V+++G ++ + + A+ VF ML + + SV+++CA G+ D G VH
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG 370
Query: 239 YIECKKVSLNSVELGTALV 257
Y+ +L++ L + +
Sbjct: 371 YVLRHGYTLDTPALNSLIT 389
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 126/256 (49%), Gaps = 14/256 (5%)
Query: 8 PDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD TFP LLK S + I+ Q+ GF D + ++L++ +A G + A +V
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKV 103
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
F+E +D++ WTA+I Y + + EA +MR G +T++ +L +
Sbjct: 104 FEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVL---EI 160
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
+ +H F V G D V ++++++Y KC H DA +FD+M RD+V W+ ++
Sbjct: 161 TQLQCLHDFAVIYG-FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME--QRDMVSWNTMI 217
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
+GY + +++ + M D + P++ T + LS L+ G+++H C+ V
Sbjct: 218 SGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH----CQIVK 273
Query: 247 LN---SVELGTALVDM 259
+ L TAL+ M
Sbjct: 274 TGFDVDMHLKTALITM 289
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 145/263 (55%), Gaps = 13/263 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GVE + T ++ +P +V + ++A +FK GF LD ALIS ++ SG
Sbjct: 342 MRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGD 401
Query: 60 IGSACQVF---DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
I + QVF D+ ++I+ +I + ++ P +A++ F +M G D +V S+
Sbjct: 402 IDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSL 459
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L N GK VHG+ +++G V LD V S+L +Y KCG +++ K+F +P+
Sbjct: 460 LSVLDCL---NLGKQVHGYTLKSGLV-LDLTVGSSLFTLYSKCGSLEESYKLFQGIPF-- 513
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+D CW+ +++G+ + ++AI +F ML D P+E TL +VL+ C+ +L +GK +
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H Y + ++LG+ALV+M
Sbjct: 574 HGYTLRAGID-KGMDLGSALVNM 595
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 123/233 (52%), Gaps = 4/233 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G PD+ T +L + S P + I+ + G D G+AL++ ++ G
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGS 601
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A QV+D D ++ ++LI+GY ++ L + F M +G +D+ + S+L+A
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AA++ + + G VH + + G + + V S+L+ MY K G DD CK F ++ + D+
Sbjct: 662 AALSDESSLGAQVHAYITKIG-LCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI--NGPDL 718
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
+ W+ L+A Y Q K +A++V+ M P++ T VLSAC+H G +++
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEE 771
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 8/260 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M Q+G+ D+ + LL + + ++ K G LD G++L + ++ G +
Sbjct: 444 MLQEGLRTDEFSVCSLLSVLD--CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSL 501
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
+ ++F KD W ++I+G+ + EA+ F +M GT D T+ +VL
Sbjct: 502 EESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVC 561
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
+ GK +HG+ ++AG + + SAL++MY KCG A +V+D +P D V
Sbjct: 562 SSHPSLPRGKEIHGYTLRAG-IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPE--LDPV 618
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
S L++GY Q QD +F +M+ + F ++S+L A A S G VH YI
Sbjct: 619 SCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYI 678
Query: 241 ECKKVSL-NSVELGTALVDM 259
K+ L +G++L+ M
Sbjct: 679 --TKIGLCTEPSVGSSLLTM 696
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 7/234 (2%)
Query: 7 EPDQHTFP-LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+PD +T+ +L S + ++ A++ K G + D F A++ +A G + A +
Sbjct: 248 KPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAME 306
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
VF +++WT +++GY K++ AL+ F +MR +G ++ TV SV+ A
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
VH + ++G LD V +AL+ MY K G D + +VF+++ R + +V+
Sbjct: 367 VCEASQVHAWVFKSG-FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVM 424
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+ + Q K AIR+F ML + + +EF++ S+LS L+ GK VH Y
Sbjct: 425 ITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGY 475
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 5/230 (2%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
++ K+G+ +ALI F+ + A +VF +S ++ W +I G ++N
Sbjct: 171 LVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQ 230
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
F +M D+ T SVL A A FGK V ++ G D +V
Sbjct: 231 NYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE--DVFVC 288
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+A++D+Y KCGH +A +VF +P VV W+V+++GY + N A+ +F M
Sbjct: 289 TAIVDLYAKCGHMAEAMEVFSRIPNP--SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG 346
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V N T+TSV+SAC + + VH ++ L+S + AL+ M
Sbjct: 347 VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDS-SVAAALISM 395
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 5/218 (2%)
Query: 42 LDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM 101
D F +L+S ++NSG + A ++FD D+++ +I+GY ++ L E+L+ F KM
Sbjct: 82 FDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM 141
Query: 102 RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
G + ++ SV+ A + F + V ++ G + V SAL+D++ K
Sbjct: 142 HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYE-VVESALIDVFSKNLR 200
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
+DA KVF + + +V CW+ ++AG ++ + +F M P+ +T +SVL
Sbjct: 201 FEDAYKVFRDSLSA--NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVL 258
Query: 222 SACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ACA L GK+V + K V + TA+VD+
Sbjct: 259 AACASLEKLRFGKVVQARV--IKCGAEDVFVCTAIVDL 294
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 36/205 (17%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A I K+G + G++L++ ++ G I C+ F + + D+IAWTALI Y ++
Sbjct: 674 VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK 733
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+EAL+ + M+ G D +T V VL A + HG V+
Sbjct: 734 ANEALQVYNLMKEKGFKPDKVTFVGVLSACS-----------HGGLVE------------ 770
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+ YF H + K + P + R VC +V + + ++A NM ++
Sbjct: 771 ---ESYF---HLNSMVKDYGIEPEN-RHYVC---MVDALGRSGRLREAESFINNM---HI 817
Query: 211 VPNEFTLTSVLSACAHSGALDQGKL 235
P+ ++L+AC G ++ GK+
Sbjct: 818 KPDALVWGTLLAACKIHGEVELGKV 842
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 138/301 (45%), Gaps = 70/301 (23%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALI-------- 51
M ++GV PD++TF +LK SK + F + ++ + GF L+ + NALI
Sbjct: 103 MEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGD 162
Query: 52 -----------------------SAFANSGFIGSACQVFDES------------------ 70
S +A G I A ++FDE
Sbjct: 163 LGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKC 222
Query: 71 -------------SVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ KD++ W A+I+GYV P EAL F +MR G D +T++S+L
Sbjct: 223 KEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLL 282
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV----WSALMDMYFKCGHCDDACKVFDEMP 173
A A+ GD GK +H + ++ V YV W+AL+DMY KCG D A +VF +
Sbjct: 283 SACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGV- 341
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
RD+ W+ L+ G + + + +I +F M V PNE T V+ AC+HSG +D+G
Sbjct: 342 -KDRDLSTWNTLIVG-LALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEG 399
Query: 234 K 234
+
Sbjct: 400 R 400
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 131/234 (55%), Gaps = 4/234 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G++P ++T +L S +E+ +++ + KLGF+ FA AL+ +A +G
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A + FD +D+ WT+LI+GYV+N EAL + +M++ G + T+ SVL+A
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 432
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ GK VHG ++ G L+ + SAL MY KCG +D VF P +DV
Sbjct: 433 CSSLATLELGKQVHGHTIKHG-FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP--NKDV 489
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V W+ +++G + +A+ +F ML++ + P++ T +++SAC+H G +++G
Sbjct: 490 VSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 4/212 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NAL++ ++ + AC++FD S ++ I W+A++ GY +N EA+K F +M S G
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
T+V VL A + GK +H F ++ G + + +AL+DMY K G DA K
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG-FERHLFATTALVDMYAKAGCLADARK 378
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
FD + RDV W+ L++GYVQ + ++A+ ++ M + ++PN+ T+ SVL AC+
Sbjct: 379 GFDCL--QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L+ GK VH + L V +G+AL M
Sbjct: 437 ATLELGKQVHGHTIKHGFGLE-VPIGSALSTM 467
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 12/262 (4%)
Query: 6 VEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
E + HT LL K+ + ++ QI + G N L++ +A G +
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEA---LKCFVKMRSTGTGVDALTVVSVLRA 119
A +F+ KD+++W +LI GY +N S + ++ F +MR+ +A T+ + +A
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G+ H V+ D YV ++L+ MY K G +D KVF MP R+
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFG-DIYVDTSLVGMYCKAGLVEDGLKVFAYMP--ERNT 184
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV--VPNEFTLTSVLSACAHSGALDQGKLVH 237
WS +V+GY + ++AI+VF L + +++ T+VLS+ A + + G+ +H
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIH 244
Query: 238 QYIECKKVSLNSVELGTALVDM 259
I K L V L ALV M
Sbjct: 245 -CITIKNGLLGFVALSNALVTM 265
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 122/233 (52%), Gaps = 7/233 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M + V P+ +T+ +L+ S + D M++ I K G + D F +ALI FA G
Sbjct: 153 MLRDNVRPNVYTYSSVLR--SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A VFDE D I W ++I G+ +N AL+ F +M+ G + T+ SVLRA
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
G H V+ + D + +AL+DMY KCG +DA +VF++M RDV+
Sbjct: 271 TGLALLELGMQAHVHIVKYDQ---DLILNNALVDMYCKCGSLEDALRVFNQM--KERDVI 325
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
WS +++G Q Q+A+++F M S PN T+ VL AC+H+G L+ G
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 10/260 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
++ G+ D T+ L+K S V + +I ++ G F N LI+ +
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A Q+FD+ +++I+WT +I+ Y K + +AL+ V M + T SVLR+
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
D + +H ++ G ++ D +V SAL+D++ K G +DA VFDEM D
Sbjct: 172 CNGMSD---VRMLHCGIIKEG-LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG--DA 225
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+ W+ ++ G+ Q ++ A+ +F M + + TLTSVL AC L+ G H +
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 240 IECKKVSLNSVELGTALVDM 259
I L L ALVDM
Sbjct: 286 IVKYDQDLI---LNNALVDM 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M++ G +Q T +L+ + + + M A + + +D D NAL+ + G +
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGM-QAHVHIVKYDQDLILNNALVDMYCKCGSL 309
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A +VF++ +D+I W+ +I+G +N EALK F +M+S+GT + +T+V VL A
Sbjct: 310 EDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFAC 369
Query: 121 AMAG--DDNFGKWVHGFYVQAGRVQLDGY-----VWSALMDMYFKCGHCDDACKVFDEMP 173
+ AG +D G+Y +L G + ++D+ K G DDA K+ +EM
Sbjct: 370 SHAGLLED-------GWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 422
Query: 174 YSYRDVVCWSVLV-AGYVQCN 193
D V W L+ A VQ N
Sbjct: 423 CE-PDAVTWRTLLGACRVQRN 442
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
Query: 87 KNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWV-HGFYVQAGRVQLD 145
+ DLP A+K ++S G D+ T +++ + G + Y R +
Sbjct: 39 QRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM- 96
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
++ + L++MY K +DA ++FD+MP R+V+ W+ +++ Y +C Q A+ + M
Sbjct: 97 -FLVNVLINMYVKFNLLNDAHQLFDQMPQ--RNVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 206 LSDNVVPNEFTLTSVLSAC--------AHSGALDQG 233
L DNV PN +T +SVL +C H G + +G
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG 189
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 126/234 (53%), Gaps = 6/234 (2%)
Query: 3 QKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
+ V D H L+ M++ D + + F+ + F A++S ++ G +
Sbjct: 240 ENDVRMDTHLLTALVTMYAGAGCMD---MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A +FD++ KD++ WT +I+ YV++D P EAL+ F +M +G D +++ SV+ A A
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
G + KWVH + ++ + + +AL++MY KCG D VF++MP R+VV W
Sbjct: 357 LGILDKAKWVHSC-IHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP--RRNVVSW 413
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
S ++ + DA+ +F M +NV PNE T VL C+HSG +++GK +
Sbjct: 414 SSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 142/291 (48%), Gaps = 36/291 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+R G DQ +F +LK SK + + ++ FK+ D F + +A+ G
Sbjct: 102 IRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGR 161
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A VFDE S +D++ W +I Y + L EA K F +M+ + D + + +++ A
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSA 221
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSAL---------MDM--------------- 155
G+ + + ++ F ++ V++D ++ +AL MDM
Sbjct: 222 CGRTGNMRYNRAIYEFLIE-NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV 280
Query: 156 -------YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
Y KCG DDA +FD+ +D+VCW+ +++ YV+ + Q+A+RVF M
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQT--EKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS 338
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ P+ ++ SV+SACA+ G LD+ K VH I + + + + AL++M
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE-SELSINNALINM 388
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 5 GVEPDQ-HTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G++PD F ++ + +++ +++ I G + + NALI+ +A G + +
Sbjct: 339 GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDAT 398
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
VF++ +++++W+++IN + S+AL F +M+ + +T V VL + +
Sbjct: 399 RDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHS 458
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G GK + + + ++D++ + +A +V + MP + +VV W
Sbjct: 459 GLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA-SNVVIWG 517
Query: 184 VLVA-----GYVQCNKF 195
L++ G ++ KF
Sbjct: 518 SLMSACRIHGELELGKF 534
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 131/228 (57%), Gaps = 4/228 (1%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
+ +I ++ + D N LI+A++ GF+ A QVFD + +++W +I Y +N +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
SEAL F++MR+ G T+ SVL A + D K +H V+ + L+ YV +A
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC-IDLNLYVGTA 202
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
L+D+Y KCG DA +VF+ M + V WS +VAGYVQ +++A+ ++ ++
Sbjct: 203 LLDLYAKCGMIKDAVQVFESM--QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
N+FTL+SV+ AC++ AL +GK +H I CK ++V + ++ VDM
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVI-CKSGFGSNVFVASSAVDM 307
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 107/198 (54%), Gaps = 3/198 (1%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
K DL+ + G AL+ +A G I A QVF+ K + W++++ GYV+N EAL
Sbjct: 190 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALL 249
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
+ + + + T+ SV+ A + GK +H ++G + +V S+ +DMY
Sbjct: 250 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG-FGSNVFVASSAVDMY 308
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
KCG ++ +F E+ +++ W+ +++G+ + + ++ + +F M D + PNE T
Sbjct: 309 AKCGSLRESYIIFSEV--QEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 217 LTSVLSACAHSGALDQGK 234
+S+LS C H+G +++G+
Sbjct: 367 FSSLLSVCGHTGLVEEGR 384
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A I K GF + F ++ + +A G + + +F E K++ W +I+G+ K+
Sbjct: 285 MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR 344
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P E + F KM+ G + +T S+L G G+ + + +S
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
++D+ + G +A ++ +P+ + W L+A
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASI-WGSLLAS 441
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 3/193 (1%)
Query: 46 AGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG 105
N LI+ + G + A +F++ VKDII+WT +I GY +N EA+ F KM G
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 106 TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
D +T+ +V+ A A G GK VH + +Q G V LD Y+ SAL+DMY KCG + A
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV-LDVYIGSALVDMYSKCGSLERA 1086
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
VF +P +++ CW+ ++ G Q+A+++F M ++V PN T SV +AC
Sbjct: 1087 LLVFFNLP--KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACT 1144
Query: 226 HSGALDQGKLVHQ 238
H+G +D+G+ +++
Sbjct: 1145 HAGLVDEGRRIYR 1157
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 126/261 (48%), Gaps = 48/261 (18%)
Query: 1 MRQKGVEPDQHTFPLLLKM--FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M + V P +T+ L+K F+ E + A I+K GF LI ++ +G
Sbjct: 862 MLRDSVSPSSYTYSSLVKASSFASRFGES---LQAHIWKFGFGFHVKIQTTLIDFYSATG 918
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I A +VFDE +D IAWT +++ Y + + M S + + ++
Sbjct: 919 RIREARKVFDEMPERDDIAWTTMVSAYRR----------VLDMDSANSLANQMS------ 962
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ + + L++ Y G+ + A +F++MP +D
Sbjct: 963 ------------------------EKNEATSNCLINGYMGLGNLEQAESLFNQMPV--KD 996
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
++ W+ ++ GY Q ++++AI VF+ M+ + ++P+E T+++V+SACAH G L+ GK VH
Sbjct: 997 IISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHM 1056
Query: 239 YIECKKVSLNSVELGTALVDM 259
Y L+ V +G+ALVDM
Sbjct: 1057 YTLQNGFVLD-VYIGSALVDM 1076
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++G+ PD+ T ++ + V+E ++ + GF LD + G+AL+ ++ G
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VF K++ W ++I G + EALK F KM +A+T VSV A
Sbjct: 1083 LERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AG + G+ ++ + + + + ++ ++ K G +A ++ M + +
Sbjct: 1143 CTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE-PNA 1201
Query: 180 VCWSVLVAG 188
V W L+ G
Sbjct: 1202 VIWGALLDG 1210
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 27/238 (11%)
Query: 16 LLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDI 75
++K S P + + + A + K + D N I+A + + A + ++
Sbjct: 779 IIKQCSTPKLLESAL--AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNV 836
Query: 76 IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG------ 129
+ AL G+V P +L+ +V+M + T S+++A++ A FG
Sbjct: 837 FVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAH 894
Query: 130 --KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
K+ GF+V+ + + L+D Y G +A KVFDEMP RD + W+ +V+
Sbjct: 895 IWKFGFGFHVK---------IQTTLIDFYSATGRIREARKVFDEMP--ERDDIAWTTMVS 943
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
Y + D+ N +S+ NE T +++ G L+Q + + + K +
Sbjct: 944 AYRRVLDM-DSANSLANQMSEK---NEATSNCLINGYMGLGNLEQAESLFNQMPVKDI 997
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 140/260 (53%), Gaps = 6/260 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ V +++T+ L+ +K + + + K G +L +L+ + G
Sbjct: 233 MRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGD 292
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I +A +VF+E S D++ WTA+I GY N +EAL F KM+ + +T+ SVL
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSG 352
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + G+ VHG ++ G D V +AL+ MY KC DA VF EM S +D+
Sbjct: 353 CGLIENLELGRSVHGLSIKVG--IWDTNVANALVHMYAKCYQNRDAKYVF-EME-SEKDI 408
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ +++G+ Q +A+ +F M S++V PN T+ S+ SACA G+L G +H Y
Sbjct: 409 VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY 468
Query: 240 -IECKKVSLNSVELGTALVD 258
++ ++ +SV +GTAL+D
Sbjct: 469 SVKLGFLASSSVHVGTALLD 488
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 123/229 (53%), Gaps = 6/229 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ Q+ K+ D L+ +A G I SA +VF++ ++++++ WT++I GYVKNDL
Sbjct: 164 IHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E L F +MR + T +++ A + GKW HG V++G ++L + +
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG-IELSSCLVT 281
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+DMY KCG +A +VF+E +S+ D+V W+ ++ GY +A+ +F M +
Sbjct: 282 SLLDMYVKCGDISNARRVFNE--HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PN T+ SVLS C L+ G+ VH KV + + ALV M
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGL--SIKVGIWDTNVANALVHM 386
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D NAL+ +A A VF+ S KDI+AW ++I+G+ +N EAL F +M
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG-YVWSALMDMYFKCGH 161
S + +TV S+ A A G G +H + V+ G + +V +AL+D Y KCG
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
A +FD + ++ + WS ++ GY + ++ +F ML PNE T TS+L
Sbjct: 496 PQSARLIFDTI--EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSIL 553
Query: 222 SACAHSGALDQGK 234
SAC H+G +++GK
Sbjct: 554 SACGHTGMVNEGK 566
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 5/210 (2%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD 109
L+S + G+ A VFD+ D W ++ Y N E +K + + G D
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYD 141
Query: 110 ALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVF 169
+ L+A D + GK +H V+ D V + L+DMY KCG A KVF
Sbjct: 142 DIVFSKALKACTELQDLDNGKKIHCQLVKVP--SFDNVVLTGLLDMYAKCGEIKSAHKVF 199
Query: 170 DEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
+++ + R+VVCW+ ++AGYV+ + ++ + +F M +NV+ NE+T +++ AC A
Sbjct: 200 NDI--TLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSA 257
Query: 230 LDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L QGK H + + L+S L T+L+DM
Sbjct: 258 LHQGKWFHGCLVKSGIELSSC-LVTSLLDM 286
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 6/219 (2%)
Query: 31 IYAQIFKLGF--DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
++A KLGF G AL+ +A G SA +FD K+ I W+A+I GY K
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
+L+ F +M + T S+L A G N GK +
Sbjct: 525 GDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKH 584
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
++ ++DM + G + A + ++MP DV C+ + G ++F V ML
Sbjct: 585 YTCMVDMLARAGELEQALDIIEKMPIQ-PDVRCFGAFLHGCGMHSRFDLGEIVIKKML-- 641
Query: 209 NVVPNEFTLTSVLSAC-AHSGALDQGKLVHQYIECKKVS 246
++ P++ + ++S A G +Q K V ++ + +S
Sbjct: 642 DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLS 680
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 130/238 (54%), Gaps = 5/238 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q+G EPD T+P LLK ++ + + I+ Q+FKLG + D F N+LI+ + G
Sbjct: 123 MMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGE 182
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS-TGTGVDALTVVSVLR 118
+ + VF++ K +W+++++ + SE L F M S T + +VS L
Sbjct: 183 MELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALL 242
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A G N G +HGF ++ +L+ V ++L+DMY KCG D A +F +M R+
Sbjct: 243 ACANTGALNLGMSIHGFLLR-NISELNIIVQTSLVDMYVKCGCLDKALHIFQKM--EKRN 299
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+ +S +++G + + A+R+F M+ + + P+ SVL+AC+HSG + +G+ V
Sbjct: 300 NLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 78 WTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYV 137
+ +I GYV EAL + +M G D T +L+A GK +HG
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 138 QAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD 197
+ G ++ D +V ++L++MY +CG + + VF+++ + WS +V+ + +
Sbjct: 160 KLG-LEADVFVQNSLINMYGRCGEMELSSAVFEKL--ESKTAASWSSMVSARAGMGMWSE 216
Query: 198 AIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTAL 256
+ +F M S+ N+ E + S L ACA++GAL+ G +H ++ + +S ++ + T+L
Sbjct: 217 CLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL-LRNISELNIIVQTSL 275
Query: 257 VDM 259
VDM
Sbjct: 276 VDM 278
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 41 DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
+L+ +L+ + G + A +F + ++ + ++A+I+G + AL+ F K
Sbjct: 266 ELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSK 325
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG 160
M G D + VSVL A + +G G+ V ++ G+V+ + L+D+ + G
Sbjct: 326 MIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAG 385
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD 197
++A + +P DV+ W ++ QC Q+
Sbjct: 386 LLEEALETIQSIPIEKNDVI-WRTFLS---QCRVRQN 418
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 131/241 (54%), Gaps = 4/241 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+ ++G E + H F LK+F S E +++ I KLG+D + F G ALI+A++ G
Sbjct: 137 LHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA VF+ KDI+ W +++ YV+N ++LK MR G + T + L+A
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G +F K VHG ++ V LD V L+ +Y + G DA KVF+EMP + DV
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYV-LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN--DV 313
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V WS ++A + Q +A+ +F M VVPNEFTL+S+L+ CA G+ +H
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 240 I 240
+
Sbjct: 374 V 374
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 129/267 (48%), Gaps = 19/267 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKM--------FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALIS 52
MR G P+ +TF LK F+K V + QI K + LD G L+
Sbjct: 238 MRMAGFMPNNYTFDTALKASIGLGAFDFAKGV-------HGQILKTCYVLDPRVGVGLLQ 290
Query: 53 AFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT 112
+ G + A +VF+E D++ W+ +I + +N +EA+ F++MR + T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 113 VVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
+ S+L A+ G+ +HG V+ G LD YV +AL+D+Y KC D A K+F E+
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVG-FDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 173 PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
S ++ V W+ ++ GY + A +F L + V E T +S L ACA ++D
Sbjct: 410 --SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 233 GKLVHQYIECKKVSLNSVELGTALVDM 259
G VH + K + V + +L+DM
Sbjct: 468 GVQVHG-LAIKTNNAKKVAVSNSLIDM 493
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 3/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + K+GFDLD + NALI +A + +A ++F E S K+ ++W +I GY
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+A F + V +T S L A A + G VHG ++ + V +
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK-KVAVSN 488
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+DMY KCG A VF+EM DV W+ L++GY + A+R+ M +
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEMETI--DVASWNALISGYSTHGLGRQALRILDIMKDRDC 546
Query: 211 VPNEFTLTSVLSACAHSGALDQGK 234
PN T VLS C+++G +DQG+
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQ 570
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 18/260 (6%)
Query: 9 DQHTFPLLLKMFSKPVVEDPF---MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
D H + +L+ + DP I+ I K G LD FA N L++A+ +GF A
Sbjct: 48 DSHAYGAMLRRCIQK--NDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALN 105
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
+FDE ++ +++ L GY D + + ++ G ++ S L+
Sbjct: 106 LFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
W+H V+ G + +V +AL++ Y CG D A VF+ + +D+V W+ +
Sbjct: 162 AEICPWLHSPIVKLG-YDSNAFVGAALINAYSVCGSVDSARTVFEGIL--CKDIVVWAGI 218
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ------Y 239
V+ YV+ F+D++++ M +PN +T + L A GA D K VH Y
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCY 278
Query: 240 IECKKVSLNSVELGTALVDM 259
+ +V + ++L T L DM
Sbjct: 279 VLDPRVGVGLLQLYTQLGDM 298
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 116/204 (56%), Gaps = 3/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ K GF LD N +IS +A G + A + F E +KD+I++ +LI G V N
Sbjct: 330 VHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCR 389
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P E+ + F +MR++G D T++ VL A + G HG+ V G ++ + +
Sbjct: 390 PEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHG-YAVNTSICN 448
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
ALMDMY KCG D A +VFD M RD+V W+ ++ G+ ++A+ +F +M V
Sbjct: 449 ALMDMYTKCGKLDVAKRVFDTM--HKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGV 506
Query: 211 VPNEFTLTSVLSACAHSGALDQGK 234
P+E TL ++LSAC+HSG +D+GK
Sbjct: 507 NPDEVTLLAILSACSHSGLVDEGK 530
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 108/214 (50%), Gaps = 9/214 (4%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDI--IAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
L +A+ + A VFDE I IAW +I Y ND +AL + KM ++G
Sbjct: 41 LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR 100
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
T VL+A A + GK +H +V D YV +AL+D Y KCG + A K
Sbjct: 101 PTKYTYPFVLKACAGLRAIDDGKLIHS-HVNCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAH 226
VFDEMP RD+V W+ +++G+ D I +F +M D + PN T+ + A
Sbjct: 160 VFDEMP--KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGR 217
Query: 227 SGALDQGKLVHQYIECKKVSL-NSVELGTALVDM 259
+GAL +GK VH Y C ++ N + + T ++D+
Sbjct: 218 AGALREGKAVHGY--CTRMGFSNDLVVKTGILDV 249
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 126/243 (51%), Gaps = 7/243 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M GV P ++T+P +LK + ++D +I++ + F D + AL+ +A G
Sbjct: 94 MLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGE 153
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST-GTGVDALTVVSVLR 118
+ A +VFDE +D++AW A+I+G+ + ++ + F+ MR G + T+V +
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A AG GK VHG+ + G D V + ++D+Y K A +VFD + + ++
Sbjct: 214 ALGRAGALREGKAVHGYCTRMG-FSNDLVVKTGILDVYAKSKCIIYARRVFD-LDFK-KN 270
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNML-SDNV-VPNEFTLTSVLSACAHSGALDQGKLV 236
V WS ++ GYV+ ++A VF+ ML +DNV + + +L CA G L G+ V
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Query: 237 HQY 239
H Y
Sbjct: 331 HCY 333
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 7/261 (2%)
Query: 2 RQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
R G+ P+ T + + + + ++ ++GF D ++ +A S I
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCI 256
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM--RSTGTGVDALTVVSVLR 118
A +VFD K+ + W+A+I GYV+N++ EA + F +M V + + +L
Sbjct: 257 IYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILM 316
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A GD + G+ VH + V+AG + LD V + ++ Y K G DA + F E+ +D
Sbjct: 317 GCARFGDLSGGRCVHCYAVKAGFI-LDLTVQNTIISFYAKYGSLCDAFRQFSEI--GLKD 373
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
V+ ++ L+ G V + +++ R+F M + + P+ TL VL+AC+H AL G H
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 239 YIECKKVSLNSVELGTALVDM 259
Y ++N+ + AL+DM
Sbjct: 434 YCVVHGYAVNT-SICNALMDM 453
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 114 VSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+S+L + + G+ +H ++ V L +Y C + A VFDE+P
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ + + W +++ Y + + A+ +++ ML+ V P ++T VL ACA A+D G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 234 KLVHQYIECKKVSLNSVELGTALVD 258
KL+H ++ C + + + + TALVD
Sbjct: 123 KLIHSHVNCSDFATD-MYVCTALVD 146
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR G+ PD T +L S + + G+ ++ NAL+ + G
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VFD +DI++W ++ G+ + L EAL F M+ TG D +T++++L A
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSA 519
Query: 120 AAMAGDDNFGKWVHGFYVQAG---RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ +G + GK + + ++D Y + + D+ + G+ D+A ++MP+
Sbjct: 520 CSHSGLVDEGKQLFNSMSRGDFNVIPRIDHY--NCMTDLLARAGYLDEAYDFVNKMPF 575
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 134/242 (55%), Gaps = 5/242 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVE-DPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ PD++TFP L +K + + I+ I K+G+ D F N+L+ +A G
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLR 118
+ SA +VFDE S +++++WT++I GY + D +A+ F +M R +++T+V V+
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A D G+ V+ F +G ++++ + SAL+DMY KC D A ++FDE S D
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSG-IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ + + + YV+ ++A+ VF M+ V P+ ++ S +S+C+ + GK H
Sbjct: 304 LC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 239 YI 240
Y+
Sbjct: 362 YV 363
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 33/290 (11%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+R + V P+ T ++ +K +E +YA I G +++ +AL+ +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A ++FDE ++ A+ + YV+ L EAL F M +G D ++++S + +
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY--- 176
+ + +GK HG+ ++ G D + +AL+DMY KC D A ++FD M
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDN-ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 177 --------------------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DN 209
+++V W+ +++G VQ + F++AI VF +M S +
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V + T+ S+ SAC H GALD K ++ YIE + L+ V LGT LVDM
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD-VRLGTTLVDM 514
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 9/241 (3%)
Query: 24 VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS---ACQVFDES-SVKDIIAWT 79
+++ M + + K G D D L++ G S A +VF+ S S +
Sbjct: 44 TIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYN 103
Query: 80 ALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQA 139
+LI GY + L +EA+ F++M ++G D T L A A + G +HG V+
Sbjct: 104 SLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
G + D +V ++L+ Y +CG D A KVFDEM S R+VV W+ ++ GY + + +DA+
Sbjct: 164 GYAK-DLFVQNSLVHFYAECGELDSARKVFDEM--SERNVVSWTSMICGYARRDFAKDAV 220
Query: 200 RVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
+F+ M+ D V PN T+ V+SACA L+ G+ V+ +I + +N + + +ALVD
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL-MVSALVD 279
Query: 259 M 259
M
Sbjct: 280 M 280
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 115/214 (53%), Gaps = 6/214 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS-TGT 106
N++++ + +G + +A + F+ K+I++W +I+G V+ L EA++ F M+S G
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D +T++S+ A G + KW++ +Y++ +QLD + + L+DM+ +CG + A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
+F+ + + RDV W+ + + AI +F +M+ + P+ L+AC+H
Sbjct: 526 SIFNSL--TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSH 583
Query: 227 SGALDQGK-LVHQYIECKKVSLNSVELGTALVDM 259
G + QGK + + ++ VS V G +VD+
Sbjct: 584 GGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDL 616
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
IY I K G LD G L+ F+ G SA +F+ + +D+ AWTA I
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
A++ F M G D + V L A + G GK + ++ V + +
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
++D+ + G ++A ++ ++MP DV+ S+L A VQ N
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 134/242 (55%), Gaps = 5/242 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVE-DPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ PD++TFP L +K + + I+ I K+G+ D F N+L+ +A G
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLR 118
+ SA +VFDE S +++++WT++I GY + D +A+ F +M R +++T+V V+
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A D G+ V+ F +G ++++ + SAL+DMY KC D A ++FDE S D
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSG-IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ + + + YV+ ++A+ VF M+ V P+ ++ S +S+C+ + GK H
Sbjct: 304 LC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 239 YI 240
Y+
Sbjct: 362 YV 363
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 33/290 (11%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+R + V P+ T ++ +K +E +YA I G +++ +AL+ +
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A ++FDE ++ A+ + YV+ L EAL F M +G D ++++S + +
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY--- 176
+ + +GK HG+ ++ G D + +AL+DMY KC D A ++FD M
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDN-ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 177 --------------------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DN 209
+++V W+ +++G VQ + F++AI VF +M S +
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V + T+ S+ SAC H GALD K ++ YIE + L+ V LGT LVDM
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD-VRLGTTLVDM 514
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 9/241 (3%)
Query: 24 VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS---ACQVFDES-SVKDIIAWT 79
+++ M + + K G D D L++ G S A +VF+ S S +
Sbjct: 44 TIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYN 103
Query: 80 ALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQA 139
+LI GY + L +EA+ F++M ++G D T L A A + G +HG V+
Sbjct: 104 SLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
G + D +V ++L+ Y +CG D A KVFDEM S R+VV W+ ++ GY + + +DA+
Sbjct: 164 GYAK-DLFVQNSLVHFYAECGELDSARKVFDEM--SERNVVSWTSMICGYARRDFAKDAV 220
Query: 200 RVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
+F+ M+ D V PN T+ V+SACA L+ G+ V+ +I + +N + + +ALVD
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL-MVSALVD 279
Query: 259 M 259
M
Sbjct: 280 M 280
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 115/214 (53%), Gaps = 6/214 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS-TGT 106
N++++ + +G + +A + F+ K+I++W +I+G V+ L EA++ F M+S G
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D +T++S+ A G + KW++ +Y++ +QLD + + L+DM+ +CG + A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
+F+ + + RDV W+ + + AI +F +M+ + P+ L+AC+H
Sbjct: 526 SIFNSL--TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSH 583
Query: 227 SGALDQGK-LVHQYIECKKVSLNSVELGTALVDM 259
G + QGK + + ++ VS V G +VD+
Sbjct: 584 GGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDL 616
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
IY I K G LD G L+ F+ G SA +F+ + +D+ AWTA I
Sbjct: 492 IYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
A++ F M G D + V L A + G GK + ++ V + +
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
++D+ + G ++A ++ ++MP DV+ S+L A VQ N
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 117/204 (57%), Gaps = 4/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I++ + + GF + N+L+ +AN G + SA +VFD+ KD++AW ++ING+ +N
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P EAL + +M S G D T+VS+L A A G GK VH + ++ G + + + +
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR-NLHSSN 128
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DN 209
L+D+Y +CG ++A +FDEM ++ V W+ L+ G ++AI +F M S +
Sbjct: 129 VLLDLYARCGRVEEAKTLFDEM--VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 210 VVPNEFTLTSVLSACAHSGALDQG 233
++P E T +L AC+H G + +G
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEG 210
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
D G+ +H +++G L YV ++L+ +Y CG A KVFD+MP +D+V W+
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLI-YVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWN 58
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
++ G+ + K ++A+ ++ M S + P+ FT+ S+LSACA GAL GK VH Y+
Sbjct: 59 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 115
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 3/190 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KG++PD T LL +K + ++ + K+G + + N L+ +A G
Sbjct: 80 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 139
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST-GTGVDALTVVSVLR 118
+ A +FDE K+ ++WT+LI G N EA++ F M ST G +T V +L
Sbjct: 140 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 199
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A + G G + +++ + ++D+ + G A + MP +
Sbjct: 200 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ-PN 258
Query: 179 VVCWSVLVAG 188
VV W L+
Sbjct: 259 VVIWRTLLGA 268
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 146/299 (48%), Gaps = 47/299 (15%)
Query: 1 MRQKGVEPDQHTFPLLLK----MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFA- 55
MR G PD + FP +LK M E ++ I +LG D D + GNAL++ +A
Sbjct: 96 MRASGRCPDHNVFPSVLKSCTMMMDLRFGES---VHGFIVRLGMDCDLYTGNALMNMYAK 152
Query: 56 ----------------------NSG-------------FIGSACQVFDESSVKDIIAWTA 80
NSG I S +VF+ KD++++
Sbjct: 153 LLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNT 212
Query: 81 LINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
+I GY ++ + +AL+ +M +T D+ T+ SVL + D GK +HG+ ++ G
Sbjct: 213 IIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG 272
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
+ D Y+ S+L+DMY K +D+ +VF + RD + W+ LVAGYVQ ++ +A+R
Sbjct: 273 -IDSDVYIGSSLVDMYAKSARIEDSERVFSRL--YCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+F M++ V P +SV+ ACAH L GK +H Y+ N + + +ALVDM
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN-IFIASALVDM 387
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 123/229 (53%), Gaps = 4/229 (1%)
Query: 6 VEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
++PD T +L +FS+ V V I+ + + G D D + G++L+ +A S I +
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
+VF +D I+W +L+ GYV+N +EAL+ F +M + A+ SV+ A A
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
+ GK +HG YV G + ++ SAL+DMY KCG+ A K+FD M + D V W+
Sbjct: 358 TLHLGKQLHG-YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM--NVLDEVSWTA 414
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++ G+ +A+ +F M V PN+ +VL+AC+H G +D+
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 46/285 (16%)
Query: 18 KMFSKPVVEDPFMI---------YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD 68
K K ++++P I +AQ + L + + +IS + N + A +F
Sbjct: 5 KALIKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFK 63
Query: 69 ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNF 128
++AW ++I + L S+AL FV+MR++G D SVL++ M D F
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKC---GHCDDACKVFDEMPYS---------- 175
G+ VHGF V+ G + D Y +ALM+MY K G VFDEMP
Sbjct: 124 GESVHGFIVRLG-MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 176 ---------------------YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNE 214
+DVV ++ ++AGY Q ++DA+R+ M + ++ P+
Sbjct: 183 AETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242
Query: 215 FTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
FTL+SVL + + +GK +H Y+ K + + V +G++LVDM
Sbjct: 243 FTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID-SDVYIGSSLVDM 286
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 129/273 (47%), Gaps = 42/273 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF--MIYAQIFKLGFDLDRF------------- 45
MR V PD HTFP LL F P+ P +AQI G D D F
Sbjct: 53 MRNHRVSPDFHTFPFLLPSFHNPL-HLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCG 111
Query: 46 ------------------AGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVK 87
A N++++A+A +G I A ++FDE +++I+W+ LINGYV
Sbjct: 112 DLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVM 171
Query: 88 NDLPSEALKCFVKMRSTGTG-----VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRV 142
EAL F +M+ + T+ +VL A G GKWVH Y+ V
Sbjct: 172 CGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHA-YIDKYHV 230
Query: 143 QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
++D + +AL+DMY KCG + A +VF+ + S +DV +S ++ + ++F
Sbjct: 231 EIDIVLGTALIDMYAKCGSLERAKRVFNALG-SKKDVKAYSAMICCLAMYGLTDECFQLF 289
Query: 203 WNM-LSDNVVPNEFTLTSVLSACAHSGALDQGK 234
M SDN+ PN T +L AC H G +++GK
Sbjct: 290 SEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 131/255 (51%), Gaps = 5/255 (1%)
Query: 5 GVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
GV PD TFP L+K + + + + LG D + F ++LI A+ G I
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
++FD KD + W ++NGY K +K F MR +A+T VL A
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK 252
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
+ G +HG V +G V +G + ++L+ MY KCG DDA K+F M S D V W+
Sbjct: 253 LLIDLGVQLHGLVVVSG-VDFEGSIKNSLLSMYSKCGRFDDASKLFRMM--SRADTVTWN 309
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
+++GYVQ ++++ F+ M+S V+P+ T +S+L + + L+ K +H YI
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH 369
Query: 244 KVSLNSVELGTALVD 258
+SL+ + L +AL+D
Sbjct: 370 SISLD-IFLTSALID 383
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 136/260 (52%), Gaps = 5/260 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR + P+ TF +L + SK +++ ++ + G D + N+L+S ++ G
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A ++F S D + W +I+GYV++ L E+L F +M S+G DA+T S+L +
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + + K +H Y+ + LD ++ SAL+D YFKC A +F + + DV
Sbjct: 350 VSKFENLEYCKQIHC-YIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC--NSVDV 406
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V ++ +++GY+ + D++ +F ++ + PNE TL S+L AL G+ +H +
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 240 IECKKVSLNSVELGTALVDM 259
I KK N +G A++DM
Sbjct: 467 I-IKKGFDNRCNIGCAVIDM 485
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ I K GFD G A+I +A G + A ++F+ S +DI++W ++I ++D
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
PS A+ F +M +G D +++ + L A A ++FGK +HGF ++ D Y S
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLAS-DVYSES 581
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN- 209
L+DMY KCG+ A VF M +++V W+ ++A K +D++ +F M+ +
Sbjct: 582 TLIDMYAKCGNLKAAMNVFKTM--KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 210 VVPNEFTLTSVLSACAHSGALDQG 233
+ P++ T ++S+C H G +D+G
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEG 663
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 131/262 (50%), Gaps = 9/262 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M GV PD TF LL SK +E I+ I + LD F +ALI A+
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +F + + D++ +TA+I+GY+ N L ++L+ F + + +T+VS+L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ G+ +HGF ++ G D + A++DMY KCG + A ++F+ + S R
Sbjct: 451 IGILLALKLGRELHGFIIKKG---FDNRCNIGCAVIDMYAKCGRMNLAYEIFERL--SKR 505
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
D+V W+ ++ Q + AI +F M + + ++++ LSACA+ + GK +H
Sbjct: 506 DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIH 565
Query: 238 QYIECKKVSLNSVELGTALVDM 259
++ K + V + L+DM
Sbjct: 566 GFM-IKHSLASDVYSESTLIDM 586
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 10/235 (4%)
Query: 10 QHTFP----LLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
+ T P LLL+ S P ++ ++A + D + ++ +A G
Sbjct: 31 EETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCG 90
Query: 65 QVFDESSVK--DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
++F ++ I W ++I+ +V+N L ++AL + KM G D T +++A
Sbjct: 91 KMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVA 150
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
+ ++ G + + +V S+L+ Y + G D K+FD + +D V W
Sbjct: 151 LKNFKGIDFLSDTVSSLG-MDCNEFVASSLIKAYLEYGKIDVPSKLFDRV--LQKDCVIW 207
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+V++ GY +C I+ F M D + PN T VLS CA +D G +H
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 131/246 (53%), Gaps = 10/246 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M + G PD +FP +LK S PV ++ + K G + + F ALIS +
Sbjct: 44 MLRSGSSPDAFSFPFILKSCASLSLPVSGQ--QLHCHVTKGGCETEPFVLTALISMYCKC 101
Query: 58 GFIGSACQVFDES--SVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
G + A +VF+E+ S + + + ALI+GY N ++A F +M+ TG VD++T++
Sbjct: 102 GLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLG 161
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ + G+ +HG V+ G + + V ++ + MY KCG + ++FDEMP
Sbjct: 162 LVPLCTVPEYLWLGRSLHGQCVKGG-LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPV- 219
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+ ++ W+ +++GY Q D + ++ M S V P+ FTL SVLS+CAH GA G
Sbjct: 220 -KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE 278
Query: 236 VHQYIE 241
V + +E
Sbjct: 279 VGKLVE 284
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 123/236 (52%), Gaps = 8/236 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANS 57
M++ GV D T L+ + + P E ++ ++ Q K G D + N+ I+ +
Sbjct: 147 MKETGVSVDSVTMLGLVPLCTVP--EYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC 204
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + + ++FDE VK +I W A+I+GY +N L + L+ + +M+S+G D T+VSVL
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ A G G V G V++ + +V +A + MY +CG+ A VFD MP +
Sbjct: 265 SSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP--VK 321
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+V W+ ++ Y + + +F +M+ + P+ VLSAC+HSG D+G
Sbjct: 322 SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 78 WTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYV 137
W + L SE++ + M +G+ DA + +L++ A G+ +H +V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLH-CHV 79
Query: 138 QAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD 197
G + + +V +AL+ MY KCG DA KVF+E P S + VC++ L++GY +K D
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 198 AIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS 249
A +F M V + T+ ++ C L G+ +H +C K L+S
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHG--QCVKGGLDS 189
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 8/191 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKL----GFDLDRFAGNALISAFAN 56
M+ GV PD T L+ + S I ++ KL GF + F NA IS +A
Sbjct: 248 MKSSGVCPDPFT---LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR 304
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G + A VFD VK +++WTA+I Y + + L F M G D V V
Sbjct: 305 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A + +G + G + + +++ +S L+D+ + G D+A + + MP
Sbjct: 365 LSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE- 423
Query: 177 RDVVCWSVLVA 187
D W L+
Sbjct: 424 PDGAVWGALLG 434
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 140/261 (53%), Gaps = 7/261 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G EP+ + + + S+ + +E I+ + K GF+LD + +AL+ +
Sbjct: 199 MESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC 258
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VF + K ++AW ++I GYV ++ +M GT T+ S+L A
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + + GK++HG+ +++ V D YV +L+D+YFKCG + A VF + + +DV
Sbjct: 319 CSRSRNLLHGKFIHGYVIRS-VVNADIYVNCSLIDLYFKCGEANLAETVFSK---TQKDV 374
Query: 180 V-CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
W+V+++ Y+ + A+ V+ M+S V P+ T TSVL AC+ AL++GK +H
Sbjct: 375 AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHL 434
Query: 239 YIECKKVSLNSVELGTALVDM 259
I ++ + + L +AL+DM
Sbjct: 435 SISESRLETDELLL-SALLDM 454
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 125/234 (53%), Gaps = 4/234 (1%)
Query: 8 PDQHTFPLLLKMFSKPVVE-DPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD TFP ++K + E MI+ + K G+ D ++L+ +A ++ QV
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQV 164
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
FDE +D+ +W +I+ + ++ +AL+ F +M S+G +++++ + A +
Sbjct: 165 FDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWL 224
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
GK +H V+ G +LD YV SAL+DMY KC + A +VF +MP + +V W+ ++
Sbjct: 225 ERGKEIHRKCVKKG-FELDEYVNSALVDMYGKCDCLEVAREVFQKMP--RKSLVAWNSMI 281
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
GYV + + + M+ + P++ TLTS+L AC+ S L GK +H Y+
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYV 335
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 124/232 (53%), Gaps = 6/232 (2%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVK-DIIAWTALINGYVKN 88
+++ +I LG D +LI+ + SA VF+ ++ D+ W +L++GY KN
Sbjct: 25 LVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKN 84
Query: 89 DLPSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+ + L+ F ++ + V D+ T +V++A G + G+ +H V++G V D
Sbjct: 85 SMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYV-CDVV 143
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V S+L+ MY K +++ +VFDEMP RDV W+ +++ + Q + + A+ +F M S
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMP--ERDVASWNTVISCFYQSGEAEKALELFGRMES 201
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PN +LT +SAC+ L++GK +H+ K L+ + +ALVDM
Sbjct: 202 SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY-VNSALVDM 252
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 6/232 (2%)
Query: 4 KGVEPDQHTFPLLLKMFSKP--VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
+G P Q T +L S+ ++ F I+ + + + D + +LI + G
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKF-IHGYVIRSVVNADIYVNCSLIDLYFKCGEAN 361
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
A VF ++ +W +I+ Y+ +A++ + +M S G D +T SVL A +
Sbjct: 362 LAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS 421
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
GK +H + R++ D + SAL+DMY KCG+ +A ++F+ +P +DVV
Sbjct: 422 QLAALEKGKQIH-LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK--KDVVS 478
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
W+V+++ Y + ++A+ F M + P+ TL +VLSAC H+G +D+G
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEG 530
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
GV+PD TF +L S+ +E I+ I + + D +AL+ ++ G A
Sbjct: 405 GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA 464
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
++F+ KD+++WT +I+ Y + P EAL F +M+ G D +T+++VL A A
Sbjct: 465 FRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHA 524
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
G + G + F + ++ + +S ++D+ + G +A ++ + P + +
Sbjct: 525 GLIDEG--LKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAEL 582
Query: 182 WSVLVAG 188
S L +
Sbjct: 583 LSTLFSA 589
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCG-HCDDACKVFDEMPYSYRDVVCWSVLVAG 188
K VH + G ++ D + +L+++YF C HC A VF+ DV W+ L++G
Sbjct: 24 KLVHQRILTLG-LRRDVVLCKSLINVYFTCKDHCS-ARHVFENFDIR-SDVYIWNSLMSG 80
Query: 189 YVQCNKFQDAIRVFWNMLSDNV-VPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
Y + + F D + VF +L+ ++ VP+ FT +V+ A G G+++H +
Sbjct: 81 YSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 8/216 (3%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
+ I+ K F AL + ++ I SA ++FDES K + +W A+I+GY +N
Sbjct: 339 YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN 398
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
L +A+ F +M+ + + +T+ +L A A G + GKWVH V++ + YV
Sbjct: 399 GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL-VRSTDFESSIYV 457
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL+ MY KCG +A ++FD M + ++ V W+ +++GY + Q+A+ +F+ ML+
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLM--TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 209 NVVPNEFTLTSVLSACAHSGALDQG-----KLVHQY 239
+ P T VL AC+H+G + +G ++H+Y
Sbjct: 516 GITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 18/243 (7%)
Query: 28 PFMIYAQIFKLGFDLDRFAG-----------NALISAFANSGFIGSACQVFDESSVKDII 76
P + Q +LG + A IS ++ G I +F E DI+
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIV 288
Query: 77 AWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY 136
A+ A+I+GY N +L F ++ +G + + T+VS++ ++G +HG+
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV---PVSGHLMLIYAIHGYC 345
Query: 137 VQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQ 196
+++ + V +AL +Y K + A K+FDE P + + W+ +++GY Q +
Sbjct: 346 LKSNFLS-HASVSTALTTVYSKLNEIESARKLFDESPE--KSLPSWNAMISGYTQNGLTE 402
Query: 197 DAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTAL 256
DAI +F M PN T+T +LSACA GAL GK VH + +S+ + TAL
Sbjct: 403 DAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE-SSIYVSTAL 461
Query: 257 VDM 259
+ M
Sbjct: 462 IGM 464
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 20/242 (8%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
+AQI GF D L ++ G I A +F D+ + L+ G+ N+ P
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 92 SEALKCFVKMR-STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+L F +R ST ++ T + AA+ DD G+ +HG V G + + S
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG-CDSELLLGS 158
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
++ MYFK +DA KVFD MP +D + W+ +++GY + + ++I+VF ++++++
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMP--EKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216
Query: 211 VP-NEFTLTSVLSACA-----------HSGALDQGKLVHQYIECKKVSLNS----VELGT 254
+ TL +L A A HS A G H Y+ +SL S +++G+
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 255 AL 256
AL
Sbjct: 277 AL 278
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 4/198 (2%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+I+ Q G D + G+ ++ + + A +VFD KD I W +I+GY KN+
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199
Query: 90 LPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
+ E+++ F + + T +D T++ +L A A + G +H + G D YV
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD-YV 258
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+ + +Y KCG +F E + D+V ++ ++ GY + + ++ +F ++
Sbjct: 259 LTGFISLYSKCGKIKMGSALFRE--FRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 209 NVVPNEFTLTSVLSACAH 226
TL S++ H
Sbjct: 317 GARLRSSTLVSLVPVSGH 334
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 118/228 (51%), Gaps = 4/228 (1%)
Query: 6 VEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
VEP+ + LL + + I+AQ+F +GF L+ + L+ +A SG + +A
Sbjct: 106 VEPETYAV-LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGI 164
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
+F ++D+I W A+I+GYV+ L E L + MR D T SV RA +
Sbjct: 165 LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDR 224
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
GK H ++ ++ + V SAL+DMYFKC D +VFD++ S R+V+ W+ L
Sbjct: 225 LEHGKRAHAVMIKRC-IKSNIIVDSALVDMYFKCSSFSDGHRVFDQL--STRNVITWTSL 281
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++GY K + ++ F M + PN T VL+AC H G +D+G
Sbjct: 282 ISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG 329
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 3/195 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MRQ + PDQ+TF + + S +E +A + K + +AL+ +
Sbjct: 200 MRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSS 259
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+VFD+ S +++I WT+LI+GY + SE LKCF KM+ G + +T + VL A
Sbjct: 260 FSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTA 319
Query: 120 AAMAGDDNFGKWVHGFYVQAGR-VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
G + G W H + ++ ++ +G ++A++D + G +A + + P
Sbjct: 320 CNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHP 378
Query: 179 VVCWSVLVAGYVQCN 193
V S+L A + N
Sbjct: 379 PVWGSLLGACRIHGN 393
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 4/157 (2%)
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
S+G V+ T +L+ + GK +H G L+ Y+ L+ +Y G
Sbjct: 101 SSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVG-FALNEYLKVKLLILYALSGDL 159
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
A +F + RD++ W+ +++GYVQ Q+ + ++++M + +VP+++T SV
Sbjct: 160 QTAGILFRSL--KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFR 217
Query: 223 ACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
AC+ L+ GK H + K+ +++ + +ALVDM
Sbjct: 218 ACSALDRLEHGKRAHA-VMIKRCIKSNIIVDSALVDM 253
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 132/254 (51%), Gaps = 13/254 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR VEP + F LLK+ + + I+ + K GF LD FA L + +A
Sbjct: 126 MRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQ 185
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VFD +D+++W ++ GY +N + AL+ M +T+VSVL A
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + GK +HG+ +++G L + +AL+DMY KCG + A ++FD M R+V
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVN-ISTALVDMYAKCGSLETARQLFDGM--LERNV 302
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++ YVQ ++A+ +F ML + V P + ++ L ACA G L++G+ +H+
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Query: 240 IECKKVSLNSVELG 253
SVELG
Sbjct: 363 ---------SVELG 367
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 110/209 (52%), Gaps = 3/209 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E I+ +LG D + N+LIS + + +A +F + + +++W A+I G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
+ +N P +AL F +MRS D T VSV+ A A + KW+HG +++ +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC-LDK 471
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ +V +AL+DMY KCG A +FD M S R V W+ ++ GY + A+ +F
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMM--SERHVTTWNAMIDGYGTHGFGKAALELFEE 529
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQG 233
M + PN T SV+SAC+HSG ++ G
Sbjct: 530 MQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + GFD AL+ +A G + +A Q+FD +++++W ++I+ YV+N+
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P EA+ F KM G ++V+ L A A GD G+++H V+ G + + V +
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG-LDRNVSVVN 376
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+ MY KC D A +F ++ R +V W+ ++ G+ Q + DA+ F M S V
Sbjct: 377 SLISMYCKCKEVDTAASMFGKL--QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ FT SV++A A K +H + + N V + TALVDM
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN-VFVTTALVDM 482
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 124/251 (49%), Gaps = 8/251 (3%)
Query: 10 QHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE 69
+H LLL+ S +++ I +FK G + F L+S F G + A +VF+
Sbjct: 37 EHPAALLLERCSS--LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEP 94
Query: 70 SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG 129
K + + ++ G+ K +AL+ FV+MR +L+ + G
Sbjct: 95 IDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG 154
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGY 189
K +HG V++G LD + + L +MY KC ++A KVFD MP RD+V W+ +VAGY
Sbjct: 155 KEIHGLLVKSG-FSLDLFAMTGLENMYAKCRQVNEARKVFDRMP--ERDLVSWNTIVAGY 211
Query: 190 VQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS 249
Q + A+ + +M +N+ P+ T+ SVL A + + GK +H Y + +S
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGY--AMRSGFDS 269
Query: 250 -VELGTALVDM 259
V + TALVDM
Sbjct: 270 LVNISTALVDM 280
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR + V+PD T+ ++ ++ + I+ + + D + F AL+ +A G
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGA 488
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +FD S + + W A+I+GY + AL+ F +M+ + +T +SV+ A
Sbjct: 489 IMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+ +G G + ++L + A++D+ + G ++A +MP
Sbjct: 549 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT- 106
N +IS +A +G + A +VFD V+D+++W A++ Y +E L+ F KM T
Sbjct: 241 NFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE 300
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D T+VSVL A A G + G+WVH Y+ ++++G++ +AL+DMY KCG D A
Sbjct: 301 KPDGFTLVSVLSACASLGSLSQGEWVH-VYIDKHGIEIEGFLATALVDMYSKCGKIDKAL 359
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
+VF S RDV W+ +++ +DA+ +F M+ + PN T VLSAC H
Sbjct: 360 EVF--RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH 417
Query: 227 SGALDQGK 234
G LDQ +
Sbjct: 418 VGMLDQAR 425
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 116/254 (45%), Gaps = 45/254 (17%)
Query: 8 PDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD+++F +LK + E+ I+ K G D F N L++ + SG+ A +V
Sbjct: 138 PDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKV 197
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
D V+D ++W +L++ Y++ L EA F +M
Sbjct: 198 LDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERN--------------------- 236
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
V++ W+ ++ Y G +A +VFD MP RDVV W+ +V
Sbjct: 237 ----------VES---------WNFMISGYAAAGLVKEAKEVFDSMPV--RDVVSWNAMV 275
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
Y + + + VF ML D+ P+ FTL SVLSACA G+L QG+ VH YI+ +
Sbjct: 276 TAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGI 335
Query: 246 SLNSVELGTALVDM 259
+ L TALVDM
Sbjct: 336 EIEGF-LATALVDM 348
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSG----FIGSACQVFDESSVKDIIAWTALINGYVK 87
+A + K G D F+ + L+ AFA + + A + + + ++I Y
Sbjct: 59 HAFMLKTGLFHDTFSASKLV-AFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYAN 117
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+ P AL F +M D + VL+A A G+ +HG ++++G V D +
Sbjct: 118 SSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVT-DVF 176
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V + L+++Y + G+ + A KV D MP RD V W+ L++ Y++ +A +F M
Sbjct: 177 VENTLVNVYGRSGYFEIARKVLDRMPV--RDAVSWNSLLSAYLEKGLVDEARALFDEMEE 234
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
NV F ++S A +G + + K V + + V
Sbjct: 235 RNVESWNF----MISGYAAAGLVKEAKEVFDSMPVRDV 268
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ I K G +++ F AL+ ++ G I A +VF +S +D+ W ++I+ + L
Sbjct: 326 VHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGL 385
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL+ F +M G + +T + VL A G + + + RV+ +
Sbjct: 386 GKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYG 445
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKF---QDAIRVFWNMLS 207
++D+ + G ++A ++ +E+P ++ S+L A C +F + A R+ +L
Sbjct: 446 CMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGA----CKRFGQLEQAERIANRLLE 501
Query: 208 DNV 210
N+
Sbjct: 502 LNL 504
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 10/261 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
+R G P + LL+M++K + ++F + D + N +++ +A G +
Sbjct: 111 IRTSGFVPGIVIWNRLLRMYAKC---GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLL 167
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A ++FDE + KD +WTA++ GYVK D P EAL + M+ + VS+ AA
Sbjct: 168 EEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAA 227
Query: 121 AMAGD-DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A A GK +HG V+AG + D +WS+LMDMY KCG D+A +FD++ +DV
Sbjct: 228 AAAVKCIRRGKEIHGHIVRAG-LDSDEVLWSSLMDMYGKCGCIDEARNIFDKI--VEKDV 284
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++ Y + +++++ +F ++ PNE+T VL+ACA + GK VH Y
Sbjct: 285 VSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGY 344
Query: 240 IECKKVSLNSVELG-TALVDM 259
+ +V + ++LVDM
Sbjct: 345 M--TRVGFDPYSFASSSLVDM 363
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 9/232 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ I + G D D ++L+ + G I A +FD+ KD+++WT++I+ Y K+
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW- 149
E F ++ + + T VL A A + GK VHG+ RV D Y +
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT---RVGFDPYSFA 356
Query: 150 -SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
S+L+DMY KCG+ + A V D P D+V W+ L+ G Q + +A++ F +L
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKP--DLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 209 NVVPNEFTLTSVLSACAHSGALDQG-KLVHQYIECKKVSLNSVELGTALVDM 259
P+ T +VLSAC H+G +++G + + E ++S S T LVD+
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY-TCLVDL 465
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 7/210 (3%)
Query: 7 EPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
P+++TF +L + E+ ++ + ++GFD FA ++L+ + G I SA
Sbjct: 316 RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
V D D+++WT+LI G +N P EALK F + +GT D +T V+VL A AG
Sbjct: 376 VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGL 435
Query: 126 DNFGKWVHGFY--VQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G + FY + R+ ++ L+D+ + G + V EMP + S
Sbjct: 436 VEKG--LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWAS 493
Query: 184 VL--VAGYVQCNKFQDAIRVFWNMLSDNVV 211
VL + Y + ++A + + + +N V
Sbjct: 494 VLGGCSTYGNIDLAEEAAQELFKIEPENPV 523
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 137/267 (51%), Gaps = 11/267 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +KG PD TFP +LK S ++ ++ + K GF+++ + L+ + G
Sbjct: 98 MLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGE 157
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +VF++ +++AW +LI+G+V N+ S+A++ F +M+S G + +V +L A
Sbjct: 158 VNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVA 217
Query: 120 AAMAGDDNFGKWVHGFYVQAG-------RVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
D GKW HGF G +V + + ++L+DMY KCG A +FD M
Sbjct: 218 CGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGM 277
Query: 173 PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
P R +V W+ ++ GY Q ++A+ +F +ML + P++ T SV+ A G
Sbjct: 278 P--ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL 335
Query: 233 GKLVHQYIECKKVSLNSVELGTALVDM 259
G+ +H Y+ K + + ALV+M
Sbjct: 336 GQSIHAYVS-KTGFVKDAAIVCALVNM 361
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A VF+ + W ++I GY + P +AL + +M G D T VL+A +
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
D FG VHGF V+ G +++ YV + L+ MY CG + +VF+++P +VV W
Sbjct: 120 LRDIQFGSCVHGFVVKTG-FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP--QWNVVAW 176
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
L++G+V N+F DAI F M S+ V NE + +L AC + GK H +++
Sbjct: 177 GSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQG 236
Query: 243 --------KKVSLNSVELGTALVDM 259
KV N + L T+L+DM
Sbjct: 237 LGFDPYFQSKVGFNVI-LATSLIDM 260
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 106/199 (53%), Gaps = 6/199 (3%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
K+GF++ +LI +A G + +A +FD + +++W ++I GY +N EAL
Sbjct: 246 KVGFNV--ILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALC 303
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY 156
F+ M G D +T +SV+RA+ + G G+ +H + + G V+ D + AL++MY
Sbjct: 304 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVK-DAAIVCALVNMY 362
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEF 215
K G + A K F+++ +D + W+V++ G +A+ +F M N P+
Sbjct: 363 AKTGDAESAKKAFEDL--EKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGI 420
Query: 216 TLTSVLSACAHSGALDQGK 234
T VL AC+H G +++G+
Sbjct: 421 TYLGVLYACSHIGLVEEGQ 439
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ PD+ TF +++ + + I+A + K GF D AL++ +A +G
Sbjct: 308 MLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGD 367
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVLR 118
SA + F++ KD IAWT +I G + +EAL F +M+ G D +T + VL
Sbjct: 368 AESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLY 427
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A + G G+ ++ + ++D+ + G ++A ++ MP +
Sbjct: 428 ACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVK-PN 486
Query: 179 VVCWSVLVAG 188
V W L+ G
Sbjct: 487 VNIWGALLNG 496
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 129/239 (53%), Gaps = 12/239 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED---PFMIYAQIFKLGFDLDRFAGNALISAFANS 57
MR GV PD+ T+P ++K S+ + D F ++A + K GF L+ +
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQ--LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKF 157
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + SA +F+ VKD++AW A + V+ + AL+ F KM + D+ TVVS+L
Sbjct: 158 GELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSML 217
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDACKVFDEMPYS 175
A G G+ + Y +A + ++D V +A +DM+ KCG+ + A +F+EM
Sbjct: 218 SACGQLGSLEIGEEI---YDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEM--K 272
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
R+VV WS ++ GY ++A+ +F M ++ + PN T VLSAC+H+G +++GK
Sbjct: 273 QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGK 331
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 115/233 (49%), Gaps = 12/233 (5%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAF-ANSGFIGSAC---QVFDESSVKDIIAWTALINGYV 86
I+A + + GF N+L++ N IG C QVFDE I W L GYV
Sbjct: 30 IHAIVLRTGFS----EKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 87 KNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG 146
+N LP E+L + KMR G D T V++A + GD + G +H V+ G L G
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL-G 144
Query: 147 YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
V + L+ MY K G A +F+ M +D+V W+ +A VQ A+ F M
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESM--QVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+D V + FT+ S+LSAC G+L+ G+ ++ +++ N + + A +DM
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII-VENARLDM 254
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
IY + K D + NA + G +A +F+E +++++W+ +I GY N
Sbjct: 232 IYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD 291
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-- 148
EAL F M++ G + +T + VL A + AG N GK VQ+ L+
Sbjct: 292 SREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEH 351
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
++ ++D+ + G ++A + +MP D W L+ C +D I
Sbjct: 352 YACMVDLLGRSGLLEEAYEFIKKMPVE-PDTGIWGALLGA---CAVHRDMI 398
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 115/204 (56%), Gaps = 4/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ +++ G ++ +L+ +A GFI A +VF K ++W +LI+G+ +N L
Sbjct: 239 VHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGL 298
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++A + V+M+S G D +T+V VL A + G G+ VH + ++ R LD +
Sbjct: 299 ANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK--RHVLDRVTAT 356
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
ALMDMY KCG + ++F+ + +D+VCW+ +++ Y Q+ + +F M N+
Sbjct: 357 ALMDMYSKCGALSSSREIFEHV--GRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNI 414
Query: 211 VPNEFTLTSVLSACAHSGALDQGK 234
P+ T S+LSA +HSG ++QG+
Sbjct: 415 EPDHATFASLLSALSHSGLVEQGQ 438
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 138/260 (53%), Gaps = 6/260 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + ++PD TF + +K S V+E ++ + G+ D F +++++ + G
Sbjct: 107 MIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGK 166
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +F + + +D+I WT ++ G+ + +A++ + +M++ G G D + ++ +L+A
Sbjct: 167 MDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQA 226
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ GD G+ VHG+ + G + ++ V ++L+DMY K G + A +VF M ++
Sbjct: 227 SGDLGDTKMGRSVHGYLYRTG-LPMNVVVETSLVDMYAKVGFIEVASRVFSRM--MFKTA 283
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W L++G+ Q A M S P+ TL VL AC+ G+L G+LVH Y
Sbjct: 284 VSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCY 343
Query: 240 IECKKVSLNSVELGTALVDM 259
I K+ L+ V TAL+DM
Sbjct: 344 I-LKRHVLDRVT-ATALMDM 361
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 4/210 (1%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD 109
LI++ G I A +VFDE + + + ++I Y + P E L+ + +M + D
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 110 ALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVF 169
+ T ++A G+ V V G + D +V S+++++Y KCG D+A +F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFG-YKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 170 DEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
+M + RDV+CW+ +V G+ Q K A+ + M ++ + + +L A G
Sbjct: 175 GKM--AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGD 232
Query: 230 LDQGKLVHQYIECKKVSLNSVELGTALVDM 259
G+ VH Y+ + +N V + T+LVDM
Sbjct: 233 TKMGRSVHGYLYRTGLPMNVV-VETSLVDM 261
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G +PD T +L S+ ++ +++ I K LDR AL+ ++ G
Sbjct: 309 MQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGA 367
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ S+ ++F+ KD++ W +I+ Y + E + F+KM + D T S+L A
Sbjct: 368 LSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSA 427
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFD 170
+ +G G+ + ++Q + L+D+ + G ++A + +
Sbjct: 428 LSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMIN 478
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 144/291 (49%), Gaps = 35/291 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + + PD TFP L+K S+ V ++QI + GF D + N+L+ +AN GF
Sbjct: 108 MLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGF 167
Query: 60 IGSACQVFDESSVKDIIAWTA-------------------------------LINGYVKN 88
I +A ++F + +D+++WT+ +INGY KN
Sbjct: 168 IAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKN 227
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
+ +A+ F M+ G + +VSV+ + A G FG+ + + V++ + ++ +
Sbjct: 228 NCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKS-HMTVNLIL 286
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL+DM+++CG + A VF+ +P + D + WS ++ G A+ F M+S
Sbjct: 287 GTALVDMFWRCGDIEKAIHVFEGLPET--DSLSWSSIIKGLAVHGHAHKAMHYFSQMISL 344
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+P + T T+VLSAC+H G +++G +++ ++ +E +VDM
Sbjct: 345 GFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDM 395
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 120/233 (51%), Gaps = 33/233 (14%)
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
+ +G A +F + ++ + LI + PS+A + +M + D +T +
Sbjct: 64 TNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFL 123
Query: 117 LRAAA-----MAGDDNFGKWVH--------------------GFYVQAGRV--QL---DG 146
++A++ + G+ + V GF AGR+ Q+ D
Sbjct: 124 IKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDV 183
Query: 147 YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
W++++ Y KCG ++A ++FDEMP+ R++ WS+++ GY + N F+ AI +F M
Sbjct: 184 VSWTSMVAGYCKCGMVENAREMFDEMPH--RNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ VV NE + SV+S+CAH GAL+ G+ ++Y+ +++N + LGTALVDM
Sbjct: 242 REGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLI-LGTALVDM 293
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 127/235 (54%), Gaps = 4/235 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +G +PD TF LL+ +E ++ KLGF +L++A+ G
Sbjct: 205 MLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGS 264
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVK-NDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ +A ++ + + +D+++ TALI G+ + N+ S+A F M T +D + V S+L+
Sbjct: 265 LANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLK 324
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
G+ +HGF +++ +++ D + ++L+DMY K G +DA F+EM +D
Sbjct: 325 ICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK--EKD 382
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V W+ L+AGY + F+ AI ++ M + + PN+ T S+LSAC+H+G + G
Sbjct: 383 VRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELG 437
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 126/262 (48%), Gaps = 7/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++ V+ +Q T+ +LK +++ I+ + K + +AL+S +A G
Sbjct: 104 MHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGK 163
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A FD +D+++W A+I+GY N + F M + G D T S+LRA
Sbjct: 164 MEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + +HG ++ G + + S L++ Y KCG +A K+ + RD+
Sbjct: 224 SIVVKCLEIVSELHGLAIKLGFGRSSALIRS-LVNAYVKCGSLANAWKLHEGTK--KRDL 280
Query: 180 VCWSVLVAGYVQCNK-FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ + L+ G+ Q N DA +F +M+ +E ++S+L C ++ G+ +H
Sbjct: 281 LSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHG 340
Query: 239 Y-IECKKVSLNSVELGTALVDM 259
+ ++ ++ + V LG +L+DM
Sbjct: 341 FALKSSQIRFD-VALGNSLIDM 361
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 17 LKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDI 75
LK+ S + V + +I+ GF + + LI + G + A ++FD S +D+
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 76 IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGF 135
++WTA+I+ + + +AL F +M + T SVL++ G G +HG
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG- 137
Query: 136 YVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKF 195
V+ G + V SAL+ +Y +CG ++A FD M RD+V W+ ++ GY
Sbjct: 138 SVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK--ERDLVSWNAMIDGYTANACA 195
Query: 196 QDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
+ +F ML++ P+ FT S+L A
Sbjct: 196 DTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
L+D+Y K G A K+FD + S RDVV W+ +++ + +C DA+ +F M ++V
Sbjct: 53 LIDLYLKQGDVKHARKLFDRI--SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 110
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
N+FT SVL +C G L +G +H +E
Sbjct: 111 ANQFTYGSVLKSCKDLGCLKEGMQIHGSVE 140
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%)
Query: 47 GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
GN+LI +A SG I A F+E KD+ +WT+LI GY ++ +A+ + +M
Sbjct: 355 GNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERI 414
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
+ +T +S+L A + G G ++ + ++ S ++DM + G+ ++A
Sbjct: 415 KPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 141/262 (53%), Gaps = 7/262 (2%)
Query: 1 MRQKGVE--PDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M +GV+ PD +T+P + K + ++ +++ +I + F D++ NAL++ + N
Sbjct: 106 MVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNF 165
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + A VFD +D+I+W +I+GY +N ++AL F M + +D T+VS+L
Sbjct: 166 GKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSML 225
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
D G+ VH V+ R+ V +AL++MY KCG D+A VFD M R
Sbjct: 226 PVCGHLKDLEMGRNVHKL-VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM--ERR 282
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DV+ W+ ++ GY + ++A+ + M + V PN T+ S++S C + ++ GK +H
Sbjct: 283 DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLH 342
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ ++V + + + T+L+ M
Sbjct: 343 GWAVRQQV-YSDIIIETSLISM 363
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 130/263 (49%), Gaps = 6/263 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +GV P+ T L+ + + V D ++ + D +LIS +A
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +VF +S W+A+I G V+N+L S+AL F +MR + T+ S+L A
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQ-LDGYVWSALMDMYFKCGHCDDACKVFD--EMPYSY 176
A D +H + + G + LD + L+ +Y KCG + A K+F+ + +
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAA--TGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+DVV W L++GY +A++VF M+ V PNE T TS L+AC+HSG +++G +
Sbjct: 488 KDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
+++ +L T +VD+
Sbjct: 548 FRFMLEHYKTLARSNHYTCIVDL 570
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 118/223 (52%), Gaps = 13/223 (5%)
Query: 44 RFAGNALIS---AFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
R +G+ L + +A G I A ++F+E ++++ +I YV+ L +A+ F++
Sbjct: 46 RVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIR 105
Query: 101 MRSTGTGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQA--GRVQLDGYVWSALMDMY 156
M S G D T V +AA G VHG +++ GR D YV +AL+ MY
Sbjct: 106 MVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGR---DKYVQNALLAMY 162
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
G + A VFD M RDV+ W+ +++GY + DA+ +F M++++V + T
Sbjct: 163 MNFGKVEMARDVFDVMK--NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHAT 220
Query: 217 LTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ S+L C H L+ G+ VH+ +E K++ + +E+ ALV+M
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLG-DKIEVKNALVNM 262
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR++ VEP+ T LL ++ + I+ + K GF A L+ ++ G
Sbjct: 411 MRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470
Query: 60 IGSACQVF----DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ SA ++F ++ KD++ W ALI+GY + AL+ F++M +G + +T S
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTS 530
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
L A + +G G + F ++ + ++ ++D+ + G D+A + +P+
Sbjct: 531 ALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFE 590
Query: 176 YRDVVCWSVLVAGYVQCNKFQ 196
V W L+A V Q
Sbjct: 591 PTSTV-WGALLAACVTHENVQ 610
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGY 189
K +H + GRV G++ S L Y CGH A K+F+EMP S ++ +++++ Y
Sbjct: 35 KALHCHVITGGRVS--GHILSTLSVTYALCGHITYARKLFEEMPQS--SLLSYNIVIRMY 90
Query: 190 VQCNKFQDAIRVFWNMLSDNV--VPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
V+ + DAI VF M+S+ V VP+ +T V A ++ G +VH I
Sbjct: 91 VREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI 143
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+L+ ++ G + + VF +D+++W +I+ +V+N L E L +M+ G
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+D +TV ++L AA+ + GK H F ++ G +Q +G + S L+DMY K G + K
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEG-MNSYLIDMYSKSGLIRISQK 474
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+F+ Y+ RD W+ +++GY Q + VF ML N+ PN T+ S+L AC+
Sbjct: 475 LFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQI 534
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
G++D GK +H + ++ +V + +ALVDM
Sbjct: 535 GSVDLGKQLHGF-SIRQYLDQNVFVASALVDM 565
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 50 LISAFANSGFIGSACQVFDES--SVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
LI ++ SG I + ++F+ S + +D W ++I+GY +N + F KM
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDA 165
+A+TV S+L A + G + GK +HGF + R LD +V SAL+DMY K G A
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSI---RQYLDQNVFVASALVDMYSKAGAIKYA 575
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
+F + R+ V ++ ++ GY Q + AI +F +M + P+ T +VLSAC+
Sbjct: 576 EDMFSQT--KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACS 633
Query: 226 HSGALDQG 233
+SG +D+G
Sbjct: 634 YSGLIDEG 641
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 8/231 (3%)
Query: 32 YAQIFKLG--FDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
Y + KLG + D F ++ IS +A G I S+ +VFD ++I W +I YV+ND
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 90 LPSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
E+++ F++ + V D +T + A + G+ HGF + R +L +
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR-ELPIVI 355
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
++LM MY +CG + VF M RDVV W+ +++ +VQ + + + + M
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSM--RERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 413
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ T+T++LSA ++ + GK H ++ + + + + L+DM
Sbjct: 414 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG--MNSYLIDM 462
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 19/187 (10%)
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG--TGVDALTVVSVLRAA 120
A Q+FD + W +I G++ N+LP EAL + +M+ T T DA T S L+A
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 121 AMAGDDNFGKWVHGFYVQ----AGRVQLDGYVWSALMDMYFKCGHCDD------ACKVFD 170
A + GK VH ++ + RV V ++LM+MY C + D KVFD
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRV-----VHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 171 EMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
M ++VV W+ L++ YV+ + +A R F M+ V P+ + +V A + S ++
Sbjct: 173 NM--RRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSI 230
Query: 231 DQGKLVH 237
+ + +
Sbjct: 231 KKANVFY 237
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 9/196 (4%)
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
+VFD K+++AW LI+ YVK +EA + F M ++ V+V A +++
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 125 DDNFGKWVHGFYVQAGRVQL-DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
+G ++ G + D +V S+ + MY + G + + +VFD R++ W+
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC--VERNIEVWN 286
Query: 184 VLVAGYVQCNKFQDAIRVFWNML-SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
++ YVQ + ++I +F + S +V +E T SA + ++ G+ H +
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF--- 343
Query: 243 KKVSLNSVELGTALVD 258
VS N EL +V+
Sbjct: 344 --VSKNFRELPIVIVN 357
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 142/262 (54%), Gaps = 9/262 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+++G++P++ TFP LLK + + + I ++ K GFD D + GN LI +
Sbjct: 104 MKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKK 163
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A +VFDE + +++++W +++ V+N + +CF +M D T+V +L
Sbjct: 164 TSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLL-- 221
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+A G+ + GK VH V ++L+ + +AL+DMY K G + A VF+ M ++V
Sbjct: 222 SACGGNLSLGKLVHS-QVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMV--DKNV 278
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTLTSVLSACAHSGALDQG-KLVH 237
WS ++ G Q ++A+++F M+ ++ V PN T VL AC+H+G +D G K H
Sbjct: 279 WTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFH 338
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ + K+ + G A+VD+
Sbjct: 339 EMEKIHKIKPMMIHYG-AMVDI 359
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 10/252 (3%)
Query: 10 QHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALI--SAFANSGFIGSACQVF 67
+H + LK+ S ++ I+ QI D F + L+ S+ + + + A +
Sbjct: 13 KHQCLIFLKLCSS--IKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLL 70
Query: 68 DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN 127
SS W L GY +D P E++ + +M+ G + LT +L+A A
Sbjct: 71 LHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLT 130
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
G+ + ++ G D YV + L+ +Y C DA KVFDEM + R+VV W+ ++
Sbjct: 131 AGRQIQVEVLKHG-FDFDVYVGNNLIHLYGTCKKTSDARKVFDEM--TERNVVSWNSIMT 187
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL 247
V+ K F M+ P+E T+ +LSAC G L GKLVH + +++ L
Sbjct: 188 ALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELEL 245
Query: 248 NSVELGTALVDM 259
N LGTALVDM
Sbjct: 246 N-CRLGTALVDM 256
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 47 GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
GN+L+ +A A +F + ++WTALI+GYV+ L LK F KMR +
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D T +VL+A+A GK +H F +++G ++ + + S L+DMY KCG DA
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAV 507
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
+VF+EMP R+ V W+ L++ + + AI F M+ + P+ ++ VL+AC+H
Sbjct: 508 QVFEEMP--DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 227 SGALDQG 233
G ++QG
Sbjct: 566 CGFVEQG 572
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 124/256 (48%), Gaps = 9/256 (3%)
Query: 8 PDQHTFPLLLKMFSKPVVEDPF-MIYAQIFKLGFDLDRF--AGNALISAFANSGFIGSAC 64
PD TF LL + V ++ ++A KLGFD + F N L+ ++ + AC
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
+F+E KD + + LI GY K+ L +E++ F+KMR +G T VL+A
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
D G+ +H V G D V + ++D Y K + +FDEMP D V ++V
Sbjct: 265 DFALGQQLHALSVTTG-FSRDASVGNQILDFYSKHDRVLETRMLFDEMP--ELDFVSYNV 321
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH-QYIECK 243
+++ Y Q ++++ ++ F M F ++LS A+ +L G+ +H Q +
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT 381
Query: 244 KVSLNSVELGTALVDM 259
S+ + +G +LVDM
Sbjct: 382 ADSI--LHVGNSLVDM 395
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 15/265 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKL----GFDLDRFAGNALISAFAN 56
MRQ G +P TF +LK V F + Q+ L GF D GN ++ ++
Sbjct: 241 MRQSGHQPSDFTFSGVLKAV---VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
+ +FDE D +++ +I+ Y + D +L F +M+ G ++
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDACKVFDEMPY 174
L AA G+ +H QA D +V ++L+DMY KC ++A +F +P
Sbjct: 358 LSIAANLSSLQMGRQLH---CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
R V W+ L++GYVQ +++F M N+ ++ T +VL A A +L GK
Sbjct: 415 --RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGK 472
Query: 235 LVHQYIECKKVSLNSVELGTALVDM 259
+H +I + +L +V G+ LVDM
Sbjct: 473 QLHAFI-IRSGNLENVFSGSGLVDM 496
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 108/253 (42%), Gaps = 40/253 (15%)
Query: 17 LKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE------- 69
L+ S D + A+I K GFD D N ++ G + +A +V+DE
Sbjct: 21 LRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTV 80
Query: 70 ---------------SSVKD---------IIAWTALINGYVKNDLPSEALKCFVKM--RS 103
SS +D ++ WT L+ Y +N EA K F +M S
Sbjct: 81 STNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGH 161
+ T D +T ++L A N VH F V+ G + + V + L+ Y +
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG-FDTNPFLTVSNVLLKSYCEVRR 199
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
D AC +F+E+P +D V ++ L+ GY + + ++I +F M P++FT + VL
Sbjct: 200 LDLACVLFEEIP--EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 222 SACA--HSGALDQ 232
A H AL Q
Sbjct: 258 KAVVGLHDFALGQ 270
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
MR + DQ TF +LK F+ ++ ++A I + G + F+G+ L+ +A
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGK--QLHAFIIRSGNLENVFSGSGLVDMYAKC 500
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G I A QVF+E ++ ++W ALI+ + N A+ F KM +G D+++++ VL
Sbjct: 501 GSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVL 560
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGR----VQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A + G G Y QA + ++ ++D+ + G +A K+ DEMP
Sbjct: 561 TACSHCGFVEQGTE----YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMP 616
Query: 174 YSYRDVVCWSVLVAGYVQCNK 194
+ +++ SVL A + N+
Sbjct: 617 FEPDEIMWSSVLNACRIHKNQ 637
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 5/253 (1%)
Query: 8 PDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
P++ T +LK S+ + +++ + K D F G +L+ +A G I +V
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
FD S ++ + WT++I + + EA+ F M+ + LTVVS+LRA G
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGAL 401
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
GK +H ++ ++ + Y+ S L+ +Y KCG DA V ++P RDVV W+ ++
Sbjct: 402 LLGKELHAQIIK-NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP--SRDVVSWTAMI 458
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
+G +A+ M+ + V PN FT +S L ACA+S +L G+ +H I K +
Sbjct: 459 SGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS-IAKKNHA 517
Query: 247 LNSVELGTALVDM 259
L++V +G+AL+ M
Sbjct: 518 LSNVFVGSALIHM 530
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 9 DQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF 67
++ F LL + S+ E ++ + K+G + ++L+ +A G + SA + F
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAF 241
Query: 68 DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN 127
D KD+I+WTA+I+ + +A+ F+ M + + TV S+L+A +
Sbjct: 242 DMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALR 301
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
FG+ VH V+ ++ D +V ++LMDMY KCG D KVFD M S R+ V W+ ++A
Sbjct: 302 FGRQVHSLVVKR-MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM--SNRNTVTWTSIIA 358
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL 247
+ + ++AI +F M +++ N T+ S+L AC GAL GK +H I +
Sbjct: 359 AHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEK 418
Query: 248 NSVELGTALV 257
N V +G+ LV
Sbjct: 419 N-VYIGSTLV 427
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 115/230 (50%), Gaps = 6/230 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A K D + GN LIS+ G + A +VFD K+ + WTA+I+GY+K L
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 91 PSEALKCFVKMRSTGTG-VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
EA F G + V +L + + G+ VHG V+ G L V
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNL--IVE 221
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
S+L+ Y +CG A + FD M +DV+ W+ +++ + AI +F ML+
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMME--EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+PNEFT+ S+L AC+ AL G+ VH + K++ V +GT+L+DM
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLV-VKRMIKTDVFVGTSLMDM 328
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 3/195 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++AQI K + + + G+ L+ + G A V + +D+++WTA+I+G
Sbjct: 407 LHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGH 466
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
SEAL +M G + T S L+A A + G+ +H + + +V S
Sbjct: 467 ESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSI-AKKNHALSNVFVGS 525
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+ MY KCG +A +VFD MP +++V W ++ GY + ++A+++ + M ++
Sbjct: 526 ALIHMYAKCGFVSEAFRVFDSMP--EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583
Query: 211 VPNEFTLTSVLSACA 225
+++ ++LS C
Sbjct: 584 EVDDYIFATILSTCG 598
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFD----LDRFAGNALISAFAN 56
M Q+GVEP+ T+ LK + + +I I + + F G+ALI +A
Sbjct: 477 MIQEGVEPNPFTYSSALKACANS---ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAK 533
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
GF+ A +VFD K++++W A+I GY +N EALK +M + G VD ++
Sbjct: 534 CGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATI 593
Query: 117 L 117
L
Sbjct: 594 L 594
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 138/262 (52%), Gaps = 12/262 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDL-DRFAGNALISAFAN 56
+ + EPD T +LK + V+ED + ++ + GFDL D F N+LI ++
Sbjct: 217 VHEAKTEPDCVTVTSVLKACT--VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSK 274
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
+ SA +VFDE++ ++I++W +++ G+V N EAL+ F M VD +TVVS+
Sbjct: 275 GFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSL 334
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
LR K +HG ++ G + + S+L+D Y C DDA V D M +Y
Sbjct: 335 LRVCKFFEQPLPCKSIHGVIIRRG-YESNEVALSSLIDAYTSCSLVDDAGTVLDSM--TY 391
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+DVV S +++G + +AI +F +M PN T+ S+L+AC+ S L K
Sbjct: 392 KDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWA 448
Query: 237 HQYIECKKVSLNSVELGTALVD 258
H + +++N + +GT++VD
Sbjct: 449 HGIAIRRSLAINDISVGTSIVD 470
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 133/246 (54%), Gaps = 14/246 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
+R G EP+ T L++ + + D I+ + + GF N+++ +A+S +
Sbjct: 118 LRVWGFEPNTSTLVLVIHA-CRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL 176
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLRA 119
SA ++FDE S +D+I+W+ +I YV++ P LK F +M T D +TV SVL+A
Sbjct: 177 -SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKA 235
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ D + G+ VHGF ++ G D +V ++L+DMY K D A +VFDE + R++
Sbjct: 236 CTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDET--TCRNI 293
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++AG+V ++ +A+ +F M+ + V +E T+ S+L C K Q
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC---------KFFEQP 344
Query: 240 IECKKV 245
+ CK +
Sbjct: 345 LPCKSI 350
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 124/241 (51%), Gaps = 10/241 (4%)
Query: 1 MRQKGVEPDQHTFPLLL---KMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M Q+ VE D+ T LL K F +P+ I+ I + G++ + A ++LI A+ +
Sbjct: 319 MVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS--IHGVIIRRGYESNEVALSSLIDAYTSC 376
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ A V D + KD+++ + +I+G EA+ F MR T +A+TV+S+L
Sbjct: 377 SLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP---NAITVISLL 433
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A +++ D KW HG ++ D V ++++D Y KCG + A + FD++ + +
Sbjct: 434 NACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQI--TEK 491
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+++ W+V+++ Y A+ +F M PN T + LSAC H G + +G ++
Sbjct: 492 NIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIF 551
Query: 238 Q 238
+
Sbjct: 552 K 552
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 118/235 (50%), Gaps = 9/235 (3%)
Query: 27 DPFMIYAQIFKLGFDLD-RFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGY 85
DPF ++ +FK L F GN++ + G + S + FD + +D ++W ++ G
Sbjct: 44 DPF-VFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGL 102
Query: 86 VKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
+ E L F K+R G + T+V V+ A D G+ +HG+ +++G +
Sbjct: 103 LDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGIS 160
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
V ++++ MY A K+FDEM S RDV+ WSV++ YVQ + +++F M
Sbjct: 161 S-VQNSILCMYADSDSL-SARKLFDEM--SERDVISWSVVIRSYVQSKEPVVGLKLFKEM 216
Query: 206 LSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ + P+ T+TSVL AC +D G+ VH + + L V + +L+DM
Sbjct: 217 VHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDM 271
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D G +++ A+A G I A + FD+ + K+II+WT +I+ Y N LP +AL F +M+
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGH 161
G +A+T ++ L A G G + V+ + L Y S ++DM + G
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHY--SCIVDMLSRAGE 578
Query: 162 CDDACKVFDEMPYSYR-DVVCWSVLVAGYVQC-NKFQDAI 199
D A ++ +P + W +++G C N+F+ I
Sbjct: 579 IDTAVELIKNLPEDVKAGASAWGAILSG---CRNRFKKLI 615
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 124/233 (53%), Gaps = 5/233 (2%)
Query: 4 KGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
+GVE D F ++LK S + I+A + KLG + + G L+ + S
Sbjct: 279 EGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFES 338
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVLRAAA 121
AC+ F E + ++W+A+I+GY + EA+K F +RS + ++ T S+ +A +
Sbjct: 339 ACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
+ D N G VH ++ + Y SAL+ MY KCG DDA +VF+ M D+V
Sbjct: 399 VLADCNIGGQVHADAIKRSLIG-SQYGESALITMYSKCGCLDDANEVFESMDNP--DIVA 455
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
W+ ++G+ +A+R+F M+S + PN T +VL+AC+H+G ++QGK
Sbjct: 456 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 129/262 (49%), Gaps = 16/262 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G +P + LLK P D I+A + + G + +++ + G+
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VFD+ +VK +A T L+ GY + +ALK FV + + G D+ VL+A
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKA 294
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A + N GK +H + G ++ + V + L+D Y KC + AC+ F E+ +
Sbjct: 295 CASLEELNLGKQIHACVAKLG-LESEVSVGTPLVDFYIKCSSFESACRAFQEIREP--ND 351
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV-VPNEFTLTSVLSACA-----------HS 227
V WS +++GY Q ++F++A++ F ++ S N + N FT TS+ AC+ H+
Sbjct: 352 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHA 411
Query: 228 GALDQGKLVHQYIECKKVSLNS 249
A+ + + QY E +++ S
Sbjct: 412 DAIKRSLIGSQYGESALITMYS 433
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 113/212 (53%), Gaps = 6/212 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N ++ + + A ++FDE S + ++ T +I+ Y + + +A+ F M ++G
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ ++L++ +FG+ +H ++AG + + + +++MY KCG A +
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCS-NTSIETGIVNMYVKCGWLVGAKR 240
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VFD+M + V C ++V GY Q + +DA+++F +++++ V + F + VL ACA
Sbjct: 241 VFDQMAVK-KPVACTGLMV-GYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASL 298
Query: 228 GALDQGKLVHQYIECKKVSLNS-VELGTALVD 258
L+ GK +H + K+ L S V +GT LVD
Sbjct: 299 EELNLGKQIHACV--AKLGLESEVSVGTPLVD 328
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A K ++ +ALI+ ++ G + A +VF+ DI+AWTA I+G+
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
SEAL+ F KM S G +++T ++VL A + AG GK ++ V +
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYD 528
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
++D+Y + G D+A K MP+ D + W ++G
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFE-PDAMSWKCFLSG 565
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 126/238 (52%), Gaps = 8/238 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANS 57
M + V PD+++ P+++K + + D + +++ +LGF D F + I+ + +
Sbjct: 108 MVRSTVLPDRYSLPIVIKAAVQ--IHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKA 165
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G +A +VFDE+ + + +W A+I G +EA++ FV M+ +G D T+VSV
Sbjct: 166 GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVT 225
Query: 118 RAAAMAGDDNFGKWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
+ GD + +H +QA + D + ++L+DMY KCG D A +F+EM
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM--RQ 283
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
R+VV WS ++ GY +A+ F M V PN+ T VLSAC H G +++GK
Sbjct: 284 RNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK 341
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 94/183 (51%), Gaps = 4/183 (2%)
Query: 78 WTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYV 137
W ++ Y++++ P +A++ ++ M + D ++ V++AA D GK +H V
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 138 QAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD 197
+ G V D + S + +Y K G ++A KVFDE P R + W+ ++ G + +
Sbjct: 145 RLGFVG-DEFCESGFITLYCKAGEFENARKVFDENPE--RKLGSWNAIIGGLNHAGRANE 201
Query: 198 AIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ-YIECKKVSLNSVELGTAL 256
A+ +F +M + P++FT+ SV ++C G L +H+ ++ K + + + +L
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 257 VDM 259
+DM
Sbjct: 262 IDM 264
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 120/234 (51%), Gaps = 3/234 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++ +PD TF L P + +I++ LG D D A N IS ++ S
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSED 306
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
SA +FD + + ++WT +I+GY + EAL F M +G D +T++S++
Sbjct: 307 TCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISG 366
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
G GKW+ G + + + +AL+DMY KCG +A +FD P + V
Sbjct: 367 CGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP--EKTV 424
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V W+ ++AGY F +A+++F M+ + PN T +VL ACAHSG+L++G
Sbjct: 425 VTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 117/240 (48%), Gaps = 2/240 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G EP+ TFP + K ++ V M++A + K F D F G A + F
Sbjct: 43 MKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNS 102
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VF+ +D W A+++G+ ++ +A F +MR D++TV++++++
Sbjct: 103 VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS 162
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A+ + +H ++ G V + V + + Y KCG D A VF+ + R V
Sbjct: 163 ASFEKSLKLLEAMHAVGIRLG-VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTV 221
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ + Y + DA ++ ML + P+ T ++ ++C + L QG+L+H +
Sbjct: 222 VSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSH 281
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 6/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR + PD T L++ S + ++ ++A +LG D+ N IS + G
Sbjct: 144 MRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGD 203
Query: 60 IGSACQVFD--ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ SA VF+ + + +++W ++ Y +A + M D T +++
Sbjct: 204 LDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLA 263
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ G+ +H + G Q D + + MY K A +FD M + R
Sbjct: 264 ASCQNPETLTQGRLIHSHAIHLGTDQ-DIEAINTFISMYSKSEDTCSARLLFDIM--TSR 320
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
V W+V+++GY + +A+ +F M+ P+ TL S++S C G+L+ GK +
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ ++V + AL+DM
Sbjct: 381 ARADIYGCKRDNVMICNALIDM 402
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 139/273 (50%), Gaps = 18/273 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLG-FDLDRFAGNALISAFANSG 58
M +GVEPD+ T +L S ++ ++A K G D + F G+AL+ + N
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-STGTGVDALTVVSVL 117
+ S +VFD + I W A+I GY +N+ EAL F+ M S G ++ T+ V+
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A +G + + +HGF V+ G + D +V + LMDMY + G D A ++F +M R
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM--EDR 469
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-----------DNVVPNEFTLTSVLSACAH 226
D+V W+ ++ GYV +DA+ + M + ++ PN TL ++L +CA
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 227 SGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
AL +GK +H Y K V +G+ALVDM
Sbjct: 530 LSALAKGKEIHAY-AIKNNLATDVAVGSALVDM 561
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 14/214 (6%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + K G D DRF N L+ ++ G I A ++F + +D++ W +I GYV ++
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486
Query: 91 PSEALKCFVKMRSTGTGV-----------DALTVVSVLRAAAMAGDDNFGKWVHGFYVQA 139
+AL KM++ V +++T++++L + A GK +H + ++
Sbjct: 487 HEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK- 545
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
+ D V SAL+DMY KCG + KVFD++P ++V+ W+V++ Y Q+AI
Sbjct: 546 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ--KNVITWNVIIMAYGMHGNGQEAI 603
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ M+ V PNE T SV +AC+HSG +D+G
Sbjct: 604 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 135/261 (51%), Gaps = 11/261 (4%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFA-GNALISAFANSGFIGS 62
G++PD + FP LLK + +E I+A ++K G+ +D N L++ + G G+
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 63 ACQVFDESSVKDIIAWTALIN---GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+VFD S ++ ++W +LI+ + K ++ EA +C + + ++VV+
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
M GK VH + ++ G +L+ ++ + L+ MY K G + + + RD+
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKG--ELNSFIINTLVAMYGKLGKLASSKVLLGS--FGGRDL 267
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ +++ Q + +A+ M+ + V P+EFT++SVL AC+H L GK +H Y
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 240 IECKKVSLNSVE-LGTALVDM 259
K SL+ +G+ALVDM
Sbjct: 328 -ALKNGSLDENSFVGSALVDM 347
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGF---DLDRFAGNALISAFANS 57
M + VEP T ++ S + + M+ Q+ G +L+ F N L++ +
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKL 249
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + S+ + +D++ W +++ +N+ EAL+ +M G D T+ SVL
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + GK +H + ++ G + + +V SAL+DMY C +VFD M R
Sbjct: 310 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM--FDR 367
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+ W+ ++AGY Q ++A+ +F M S ++ N T+ V+ AC SGA + + +
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 237 HQYI 240
H ++
Sbjct: 428 HGFV 431
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 78 WTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYV 137
W L+ V+++L EA+ +V M G D ++L+A A D GK +H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 138 QAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD 197
+ G V + L+++Y KCG KVFD + S R+ V W+ L++ K++
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI--SERNQVSWNSLISSLCSFEKWEM 182
Query: 198 AIRVFWNMLSDNVVPNEFTLTSVLSACAH---SGALDQGKLVHQYIECKKVSLNSVELGT 254
A+ F ML +NV P+ FTL SV++AC++ L GK VH Y +K LNS + T
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY-GLRKGELNSFIINT 241
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 118/237 (49%), Gaps = 33/237 (13%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF----DESSV-------------- 72
I+ Q+ KLGF+ G+ L+ +AN G I A +VF D ++V
Sbjct: 161 IHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGM 220
Query: 73 ------------KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
KD ++W A+I G +N L EA++CF +M+ G +D SVL A
Sbjct: 221 IEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPAC 280
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
G N GK +H ++ Q YV SAL+DMY KC A VFD M ++VV
Sbjct: 281 GGLGAINEGKQIHACIIRT-NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM--KQKNVV 337
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
W+ +V GY Q + ++A+++F +M + P+ +TL +SACA+ +L++G H
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 125/235 (53%), Gaps = 4/235 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +G++ DQ+ F +L + + I+A I + F + G+ALI +
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VFD K++++WTA++ GY + EA+K F+ M+ +G D T+ + A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G HG + +G + V ++L+ +Y KCG DD+ ++F+EM + RD
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYV-TVSNSLVTLYGKCGDIDDSTRLFNEM--NVRDA 437
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
V W+ +V+ Y Q + + I++F M+ + P+ TLT V+SAC+ +G +++G+
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 35/246 (14%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF-VKMRS 103
F+ N L+ A++ +G I F++ +D + W LI GY + L A+K + MR
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHG--------FYVQAGRVQLDGY-------- 147
+ +T++++L+ ++ G + GK +HG Y+ G L Y
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 148 --------------VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
++++LM CG +DA ++F M +D V W+ ++ G Q
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME---KDSVSWAAMIKGLAQNG 249
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELG 253
++AI F M + +++ SVL AC GA+++GK +H I + + + +G
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI-IRTNFQDHIYVG 308
Query: 254 TALVDM 259
+AL+DM
Sbjct: 309 SALIDM 314
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G++PD +T + + +E+ + + G N+L++ + G
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGD 421
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I + ++F+E +V+D ++WTA+++ Y + E ++ F KM G D +T+ V+ A
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 120 AAMAGDDNFG-KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ AG G ++ + G V G+ +S ++D++ + G ++A + + MP+ D
Sbjct: 482 CSRAGLVEKGQRYFKLMTSEYGIVPSIGH-YSCMIDLFSRSGRLEEAMRFINGMPFP-PD 539
Query: 179 VVCWSVLVA 187
+ W+ L++
Sbjct: 540 AIGWTTLLS 548
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 112/217 (51%), Gaps = 7/217 (3%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
A NA+I F G I A +VFD +D W +I Y + EAL F +M+
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ 325
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHC 162
G +++S+L A +G+ VH V R Q D YV S LM MY KCG
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLV---RCQFDDDVYVASVLMTMYVKCGEL 382
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
A VFD +S +D++ W+ +++GY ++A+++F M S +PN+ TL ++L+
Sbjct: 383 VKAKLVFDR--FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 223 ACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
AC+++G L++G + + +E K +VE + VDM
Sbjct: 441 ACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS----KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M+++GV P +FP L+ + S ++ ++A + + FD D + + L++ +
Sbjct: 322 MQKQGVRP---SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVK 378
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G + A VFD S KDII W ++I+GY + L EALK F +M S+GT + +T++++
Sbjct: 379 CGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAI 438
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L A + AG G + V +S +DM + G D A ++ + M
Sbjct: 439 LTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKP 498
Query: 177 RDVVCWSVLVAG 188
D W L+
Sbjct: 499 -DATVWGALLGA 509
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+++S + ++G A Q+FDE S +++++W L++GY+KN + EA F M
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV- 110
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
V +V M G+ F+ R ++ W+ + G D A K
Sbjct: 111 VSWTAMVKGYMQEGMVGEAE-----SLFWRMPERNEVS---WTVMFGGLIDDGRIDKARK 162
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
++D MP +DVV + ++ G + + +A +F M NVV T T++++ +
Sbjct: 163 LYDMMP--VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVV----TWTTMITGYRQN 216
Query: 228 GALDQG-KLVHQYIECKKVSLNSVELGTAL 256
+D KL E +VS S+ LG L
Sbjct: 217 NRVDVARKLFEVMPEKTEVSWTSMLLGYTL 246
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 3/206 (1%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
+++ + G++LD G+ L+ AN G I A ++F KDIIA++ LI G VK+
Sbjct: 362 LQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKS 421
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
S A F ++ G D V ++L+ + +GK +HG ++ G + +
Sbjct: 422 GFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKG-YESEPVT 480
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL+DMY KCG D+ +FD M RDVV W+ ++ G+ Q + ++A R F M++
Sbjct: 481 ATALVDMYVKCGEIDNGVVLFDGML--ERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGK 234
+ PN+ T +LSAC HSG L++ +
Sbjct: 539 GIEPNKVTFLGLLSACRHSGLLEEAR 564
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I A + K G + F N +IS + + + A +VFDE S ++I+ WT +++GY +
Sbjct: 27 IQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGK 86
Query: 91 PSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH---------------- 133
P++A++ + +M S + +VL+A + GD G V+
Sbjct: 87 PNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMN 146
Query: 134 ---GFYVQAGR-----------VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
YV+ GR ++ W+ L+ Y K G D+A +F MP +V
Sbjct: 147 SVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQP--NV 204
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
V W+ L++G+V + A+ M + +V + F L L AC+ G L GK +H
Sbjct: 205 VSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLH 261
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 4/213 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N LIS + +G + A +F ++++W LI+G+V P AL+ V+M+ G
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLV 235
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+D + L+A + G GK +H V++G ++ + SAL+DMY CG A
Sbjct: 236 LDGFALPCGLKACSFGGLLTMGKQLHCCVVKSG-LESSPFAISALIDMYSNCGSLIYAAD 294
Query: 168 VFDEMPYSYR-DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
VF + + V W+ +++G++ + + A+ + + ++ + +TL+ L C +
Sbjct: 295 VFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICIN 354
Query: 227 SGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L G VH + L+ + +G+ LVD+
Sbjct: 355 YVNLRLGLQVHSLVVVSGYELDYI-VGSILVDL 386
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 10/264 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+++G+ D P LK S ++ ++ + K G + FA +ALI ++N G
Sbjct: 229 MQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGS 288
Query: 60 IGSACQVFDESSV---KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
+ A VF + + + W ++++G++ N+ AL +++ + D+ T+
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L+ + G VH V +G +LD V S L+D++ G+ DA K+F +P
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSG-YELDYIVGSILVDLHANVGNIQDAHKLFHRLP--N 405
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+D++ +S L+ G V+ A +F ++ + ++F ++++L C+ +L GK +
Sbjct: 406 KDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQI 465
Query: 237 HQYIECKKVSLNSVEL-GTALVDM 259
H C K S + TALVDM
Sbjct: 466 HGL--CIKKGYESEPVTATALVDM 487
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G+ + ++ G Q + ++ + ++ MY DA KVFDEM S R++V W+ +V+G
Sbjct: 24 GESIQAHVIKQGISQ-NVFIANNVISMYVDFRLLSDAHKVFDEM--SERNIVTWTTMVSG 80
Query: 189 YVQCNKFQDAIRVFWNML-SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL 247
Y K AI ++ ML S+ NEF ++VL AC G + G LV++ I + +
Sbjct: 81 YTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLR- 139
Query: 248 NSVELGTALVDM 259
V L ++VDM
Sbjct: 140 GDVVLMNSVVDM 151
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 128/228 (56%), Gaps = 5/228 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + K G + N L+S + + I +A ++FDE S + + AWT +I+ + K+
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+ AL F +M ++GT + T SV+R+ A D ++G VHG ++ G + + V S
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTG-FEGNSVVGS 163
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L D+Y KCG +AC++F + + D + W+++++ V K+++A++ + M+ V
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNA--DTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
PNEFT +L A + G L+ GK +H I + + LN V L T+LVD
Sbjct: 222 PPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVV-LKTSLVD 267
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 5/259 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M + GV P++ TF LL S +E I++ I G L+ +L+ ++ +
Sbjct: 216 MVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKM 275
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A +V + S +D+ WT++++G+V+N EA+ F++MRS G + T ++L
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD-DACKVFDEMPYSYRDV 179
+ +FGK +H ++ G + V +AL+DMY KC + +A +VF M +V
Sbjct: 336 SAVRSLDFGKQIHSQTIKVG-FEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSP--NV 392
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ L+ G V QD + M+ V PN TL+ VL AC+ + + +H Y
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 240 IECKKVSLNSVELGTALVD 258
+ + V V +G +LVD
Sbjct: 453 LLRRHVDGEMV-VGNSLVD 470
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 4/234 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++ VEP+ T +L+ SK V I+A + + D + GN+L+ A+A+S
Sbjct: 418 MVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRK 477
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A V +D I +T+L+ + + AL M G +D L++ + A
Sbjct: 478 VDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA 537
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+A G GK +H + V++G V ++L+DMY KCG +DA KVF+E+ DV
Sbjct: 538 SANLGALETGKHLHCYSVKSG-FSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP--DV 594
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V W+ LV+G A+ F M P+ T +LSAC++ D G
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLG 648
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFAN-SG 58
MR G++P+ T+ +L + S D I++Q K+GF+ GNAL+ + S
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
A +VF ++++WT LI G V + + ++M + +T+ VLR
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLR 435
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
A + +H + + R +DG V ++L+D Y D A V M
Sbjct: 436 ACSKLRHVRRVLEIHAYLL---RRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKR-- 490
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
RD + ++ LV + + K + A+ V M D + ++ +L +SA A+ GAL+ GK +
Sbjct: 491 RDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL 550
Query: 237 HQY 239
H Y
Sbjct: 551 HCY 553
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 123/235 (52%), Gaps = 7/235 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M++KGV P++ T+ ++L PV+ P ++AQ+ K ++ G AL+ A+ G +
Sbjct: 388 MKRKGVRPNEFTYSVILTAL--PVI-SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA- 119
A +VF KDI+AW+A++ GY + A+K F ++ G + T S+L
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AA GK HGF +++ R+ V SAL+ MY K G+ + A +VF +D+
Sbjct: 505 AATNASMGQGKQFHGFAIKS-RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ--REKDL 561
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
V W+ +++GY Q + A+ VF M V + T V +AC H+G +++G+
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 129/259 (49%), Gaps = 8/259 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDP-FMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +G +P+ TF L + ++ V ++ + K G D N+LI+ + G
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 244
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +FD++ VK ++ W ++I+GY N L EAL F MR + + SV++
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A + F + +H V+ G + D + +ALM Y KC DA ++F E+ +V
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFL-FDQNIRTALMVAYSKCTAMLDALRLFKEIG-CVGNV 362
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ +++G++Q + ++A+ +F M V PNEFT + +L+A + VH
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQ 418
Query: 240 IECKKVSLNSVELGTALVD 258
+ K S +GTAL+D
Sbjct: 419 V-VKTNYERSSTVGTALLD 436
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 120/237 (50%), Gaps = 10/237 (4%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPF--MIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
G+E D F +LK+ S + ++ F ++ Q K GF D G +L+ +
Sbjct: 88 GMEMDCSIFSSVLKV-SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD 146
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
+VFDE ++++ WT LI+GY +N + E L F++M++ GT ++ T + L A
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
G G VH V+ G LD V ++L+++Y KCG+ A +FD+ + VV
Sbjct: 207 EGVGGRGLQVHTVVVKNG---LDKTIPVSNSLINLYLKCGNVRKARILFDKT--EVKSVV 261
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
W+ +++GY +A+ +F++M + V +E + SV+ CA+ L + +H
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLH 318
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 56 NSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+S + +A +FD+S +D ++ +L+ G+ ++ EA + F+ + G +D S
Sbjct: 39 SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
VL+ +A D+ FG+ +H ++ G + D V ++L+D Y K + D KVFDEM
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLD-DVSVGTSLVDTYMKGSNFKDGRKVFDEM--K 155
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
R+VV W+ L++GY + + + + +F M ++ PN FT + L A G +G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 236 VHQYI 240
VH +
Sbjct: 216 VHTVV 220
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKM--FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
+ + G++P++ TF +L + + + + K D +AL++ +A G
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKG 544
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I SA +VF KD+++W ++I+GY ++ +AL F +M+ +D +T + V
Sbjct: 545 NIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFA 604
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A AG G+ V+ ++ S ++D+Y + G + A KV + MP
Sbjct: 605 ACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS 664
Query: 179 VVCWSVLVAGYVQ 191
+ ++L A V
Sbjct: 665 TIWRTILAACRVH 677
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 129/243 (53%), Gaps = 14/243 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFM----IYAQIFKLGFDLDRFAGNALISAFA 55
M + GVE D+ T+ +LK + + M I+A + + G+ + L+ +A
Sbjct: 169 MNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA 228
Query: 56 NSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM--RSTGTGVDALTV 113
G + A VF V+++++W+A+I Y KN EAL+ F +M + + +++T+
Sbjct: 229 RFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTM 288
Query: 114 VSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGHCDDACKVFDE 171
VSVL+A A GK +HG+ ++ G LD V SAL+ MY +CG + +VFD
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILRRG---LDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 172 MPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
M RDVV W+ L++ Y + AI++F ML++ P T SVL AC+H G ++
Sbjct: 346 M--HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 232 QGK 234
+GK
Sbjct: 404 EGK 406
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 116/240 (48%), Gaps = 10/240 (4%)
Query: 8 PDQHTFPLL-LKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
P Q T+ LL L + + D ++ I G D D F LI +++ G + A +V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA--AAMAG 124
FD++ + I W AL E L + KM G D T VL+A A+
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 125 DDNF--GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
++ GK +H + G Y+ + L+DMY + G D A VF MP R+VV W
Sbjct: 195 VNHLMKGKEIHAHLTRRG-YSSHVYIMTTLVDMYARFGCVDYASYVFGGMP--VRNVVSW 251
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSD--NVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
S ++A Y + K +A+R F M+ + + PN T+ SVL ACA AL+QGKL+H YI
Sbjct: 252 SAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI 311
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 126/244 (51%), Gaps = 10/244 (4%)
Query: 2 RQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
R+ V PD T PL+L+ S + +I+ KLGF F +AL+ + + G +
Sbjct: 126 RESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKL 185
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A ++FD+ V+D + +TA+ GYV+ L F +M +G +D++ +VS+L A
Sbjct: 186 LHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMAC 245
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGY-VWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
G GK VHG+ ++ R G + +A+ DMY KC D A VF M S RDV
Sbjct: 246 GQLGALKHGKSVHGWCIR--RCSCLGLNLGNAITDMYVKCSILDYAHTVFVNM--SRRDV 301
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG----KL 235
+ WS L+ GY + ++F ML + + PN T VLSACAH G +++ +L
Sbjct: 302 ISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRL 361
Query: 236 VHQY 239
+ +Y
Sbjct: 362 MQEY 365
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 146/260 (56%), Gaps = 12/260 (4%)
Query: 5 GVEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
GV+PD+ TF LL V+E M+ A I K G NALISA++ +G I A
Sbjct: 384 GVKPDEFTFGSLLATSLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV--DALTVVSVLRAAA 121
+F+ S K++I+W A+I+G+ N P E L+ F + + + DA T+ ++L
Sbjct: 441 DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICV 500
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
G H + ++ G+ + + + +AL++MY +CG ++ +VF++M S +DVV
Sbjct: 501 STSSLMLGSQTHAYVLRHGQFK-ETLIGNALINMYSQCGTIQNSLEVFNQM--SEKDVVS 557
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQG-KLVHQY 239
W+ L++ Y + + ++A+ + M + V+P+ T ++VLSAC+H+G +++G ++ +
Sbjct: 558 WNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSM 617
Query: 240 IECKKVSLNSVELGTALVDM 259
+E V + +V+ + LVD+
Sbjct: 618 VEFHGV-IRNVDHFSCLVDL 636
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 19/262 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M + GV D+ F +L M ++ +++ + K GF + NALI+ + N +
Sbjct: 181 MHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 61 GSACQVFDES--SVKDIIAWTALINGYV--KNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
AC VF+E+ +V+D + + +I+G K D E+L F KM LT VSV
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD---ESLLVFRKMLEASLRPTDLTFVSV 297
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
+ + + A G VHG ++ G + V +A M MY A KVF+ +
Sbjct: 298 MGSCSCAA---MGHQVHGLAIKTGYEKYT-LVSNATMTMYSSFEDFGAAHKVFESLE--E 351
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
+D+V W+ +++ Y Q + A+ V+ M V P+EFT S+L A S LD ++V
Sbjct: 352 KDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMV 408
Query: 237 HQYIECKKVSLNS-VELGTALV 257
I K L+S +E+ AL+
Sbjct: 409 QACI--IKFGLSSKIEISNALI 428
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 109/231 (47%), Gaps = 9/231 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ K G++ NA ++ +++ G+A +VF+ KD++ W +I+ Y + L
Sbjct: 310 VHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKL 369
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
A+ + +M G D T S+L A + D + + V ++ G + + +
Sbjct: 370 GKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFG-LSSKIEISN 425
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+ Y K G + A +F+ ++++ W+ +++G+ + + F +L V
Sbjct: 426 ALISAYSKNGQIEKADLLFERSL--RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV 483
Query: 211 --VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+P+ +TL+++LS C + +L G H Y+ + +G AL++M
Sbjct: 484 RILPDAYTLSTLLSICVSTSSLMLGSQTHAYV-LRHGQFKETLIGNALINM 533
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Query: 8 PDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD +T LL + S + +A + + G + GNALI+ ++ G I ++ +V
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGD 125
F++ S KD+++W +LI+ Y ++ A+ + M+ G + DA T +VL A + AG
Sbjct: 547 FNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGL 606
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
G + V+ V + +S L+D+ + GH D+A
Sbjct: 607 VEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEA 646
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 33/190 (17%)
Query: 82 INGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
+ G ++ ALK F + R T D +V + A D FG VH + +++G
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 141 RV------------------------------QLDGYVWSALMDMYFKCGHCDDACKVFD 170
+ + D Y W+ L+ FK G + A +VFD
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 171 EMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
+MP DV W+ ++ G + + ++ +F M V ++F ++LS C + G+L
Sbjct: 148 KMP-ERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY-GSL 205
Query: 231 DQGKLVHQYI 240
D GK VH +
Sbjct: 206 DFGKQVHSLV 215
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 117/226 (51%), Gaps = 3/226 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
Q+F + + N++++ GF+ A +F +D W ++++G+ ++D E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
AL F M G ++ + SVL A + D N G VH ++ + D Y+ SAL+
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS-DVYIGSALV 194
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY KCG+ +DA +VFDEM R+VV W+ L+ + Q +A+ VF ML V P+
Sbjct: 195 DMYSKCGNVNDAQRVFDEM--GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
E TL SV+SACA A+ G+ VH + N + L A VDM
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 34/263 (12%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++ I K F D + G+AL+ ++ G + A +VFDE +++++W +LI + +N
Sbjct: 174 VHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGP 233
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL F M + D +T+ SV+ A A G+ VHG V+ +++ D + +
Sbjct: 234 AVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSN 293
Query: 151 ALMDMYFKCGHCDDACKVFDEMP-----------------------------YSYRDVVC 181
A +DMY KC +A +FD MP + R+VV
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS 353
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
W+ L+AGY Q + ++A+ +F + ++V P ++ ++L ACA L G H ++
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 242 CKKVSLNSVE-----LGTALVDM 259
S E +G +L+DM
Sbjct: 414 KHGFKFQSGEEDDIFVGNSLIDM 436
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
A ++IS +A + +A +F + + +++++W ALI GY +N EAL F ++
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVH------GFYVQAGRVQLDGYVWSALMDMYFK 158
+ ++L+A A + + G H GF Q+G + D +V ++L+DMY K
Sbjct: 381 SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE-EDDIFVGNSLIDMYVK 439
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
CG ++ VF +M RD V W+ ++ G+ Q +A+ +F ML P+ T+
Sbjct: 440 CGCVEEGYLVFRKM--MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 219 SVLSACAHSGALDQGK 234
VLSAC H+G +++G+
Sbjct: 498 GVLSACGHAGFVEEGR 513
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 31/159 (19%)
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP----YSY--------- 176
++VH +++G + ++ + L+D Y KCG +D +VFD+MP Y++
Sbjct: 40 RYVHASVIKSG-FSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTK 98
Query: 177 ----------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSV 220
RD W+ +V+G+ Q ++ ++A+ F M + V NE++ SV
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 221 LSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
LSAC+ +++G VH I K L+ V +G+ALVDM
Sbjct: 159 LSACSGLNDMNKGVQVHSLI-AKSPFLSDVYIGSALVDM 196
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDL------DRFAGNALISA 53
++++ V P ++F +LK + + + + K GF D F GN+LI
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 54 FANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTV 113
+ G + VF + +D ++W A+I G+ +N +EAL+ F +M +G D +T+
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 114 VSVLRAAAMAGDDNFGK-WVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
+ VL A AG G+ + G L + ++ ++D+ + G ++A + +EM
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH-YTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 173 PYSYRDVVCWSVLVAGYVQCN 193
P V+ S+L A V N
Sbjct: 556 PMQPDSVIWGSLLAACKVHRN 576
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 37/268 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMI---YAQIFKLGFDLDRFAGNALISAFANS 57
MR++ V PD HTFP + K + D ++ + Q + G D F N LI ++
Sbjct: 106 MRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLI 165
Query: 58 GFIGSACQVFDESS-------------------------------VKDIIAWTALINGYV 86
I SA Q+FDE+ ++D+++W +LI+GY
Sbjct: 166 APIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYA 225
Query: 87 KNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG 146
+ + EA+K F +M + G D + +VS L A A +GD GK +H Y + R+ +D
Sbjct: 226 QMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHD-YTKRKRLFIDS 284
Query: 147 YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
++ + L+D Y KCG D A ++F+ S + + W+ ++ G + + F M+
Sbjct: 285 FLATGLVDFYAKCGFIDTAMEIFELC--SDKTLFTWNAMITGLAMHGNGELTVDYFRKMV 342
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGK 234
S + P+ T SVL C+HSG +D+ +
Sbjct: 343 SSGIKPDGVTFISVLVGCSHSGLVDEAR 370
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 143 QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
Q D ++ L+D K A ++FD MP RD+V W+ L++GY Q N ++AI++F
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPL--RDLVSWNSLISGYAQMNHCREAIKLF 237
Query: 203 WNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
M++ + P+ + S LSACA SG +GK +H Y + K++ ++S L T LVD
Sbjct: 238 DEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSF-LATGLVD 292
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 23/253 (9%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M + +EPD+ TF +LK + + I++ I K G + G +LI ++ G I
Sbjct: 474 MLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMI 533
Query: 61 GSACQV----FDESSVKDI----------------IAWTALINGYVKNDLPSEALKCFVK 100
A ++ F ++V ++W ++I+GYV + +A F +
Sbjct: 534 EEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTR 593
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG 160
M G D T +VL A GK +H ++ +Q D Y+ S L+DMY KCG
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYICSTLVDMYSKCG 652
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSV 220
D+ +F++ RD V W+ ++ GY K ++AI++F M+ +N+ PN T S+
Sbjct: 653 DLHDSRLMFEKSLR--RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISI 710
Query: 221 LSACAHSGALDQG 233
L ACAH G +D+G
Sbjct: 711 LRACAHMGLIDKG 723
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 9/262 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANS 57
M ++G+E D TF ++LK+ S +ED + I+ + ++G D D A +AL+ +A
Sbjct: 171 MGREGIEFDGRTFAIILKVCS--FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ +VF K+ ++W+A+I G V+N+L S ALK F +M+ GV SVL
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
R+ A + G +H +++ DG V +A +DMY KC + DA +FD R
Sbjct: 289 RSCAALSELRLGGQLHAHALKSD-FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
++ ++ GY Q A+ +F ++S + +E +L+ V ACA L +G ++
Sbjct: 348 Q--SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+SL+ V + A +DM
Sbjct: 406 GLAIKSSLSLD-VCVANAAIDM 426
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 21/253 (8%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+ + IY K LD NA I + + A +VFDE +D ++W A+I
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
+ +N E L FV M + D T S+L+A G +G +H V++G
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMAS- 515
Query: 145 DGYVWSALMDMYFKCGHCDDACKV----------------FDEMPYSYRDVVC--WSVLV 186
+ V +L+DMY KCG ++A K+ ++M +C W+ ++
Sbjct: 516 NSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSII 575
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
+GYV + +DA +F M+ + P++FT +VL CA+ + GK +H + KK
Sbjct: 576 SGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV-IKKEL 634
Query: 247 LNSVELGTALVDM 259
+ V + + LVDM
Sbjct: 635 QSDVYICSTLVDM 647
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 6/235 (2%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
G P LL++++ F+ + +F D + N +I+ ++ S + A
Sbjct: 78 GFRPTTFVLNCLLQVYTNS---RDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKAN 134
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
F+ V+D+++W ++++GY++N ++++ FV M G D T +L+ +
Sbjct: 135 SFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLE 194
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
D + G +HG V+ G D SAL+DMY K ++ +VF +P ++ V WS
Sbjct: 195 DTSLGMQIHGIVVRVG-CDTDVVAASALLDMYAKGKRFVESLRVFQGIP--EKNSVSWSA 251
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
++AG VQ N A++ F M N ++ SVL +CA L G +H +
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G+ PD+ T+ +L + I+AQ+ K D + + L+ ++ G
Sbjct: 594 MMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD 653
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + +F++S +D + W A+I GY + EA++ F +M + +T +S+LRA
Sbjct: 654 LHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRA 713
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A G K + FY+ LD + +S ++D+ K G A ++ EMP+
Sbjct: 714 CAHMG--LIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEAD 771
Query: 178 DVVCWSVLVA 187
DV+ W L+
Sbjct: 772 DVI-WRTLLG 780
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 127/230 (55%), Gaps = 6/230 (2%)
Query: 31 IYAQIFKLG--FDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
I+A+I K G + + + L+ +A + A +F + V+++ +W A+I +
Sbjct: 92 IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
L AL FV+M D V +V +A FG+ VHG+ V++G ++ +V
Sbjct: 152 GLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG-LEDCVFV 210
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
S+L DMY KCG DDA KVFDE+P R+ V W+ L+ GYVQ K ++AIR+F +M
Sbjct: 211 ASSLADMYGKCGVLDDASKVFDEIP--DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
V P T+++ LSA A+ G +++GK H + L+++ LGT+L++
Sbjct: 269 GVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI-LGTSLLN 317
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 4/235 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR++GVEP + T L + VE+ +A G +LD G +L++ + G
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A VFD KD++ W +I+GYV+ L +A+ MR D +T+ +++ A
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AA + GK V + ++ + D + S +MDMY KCG DA KVFD +D+
Sbjct: 385 AARTENLKLGKEVQCYCIRHS-FESDIVLASTVMDMYAKCGSIVDAKKVFDST--VEKDL 441
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+ W+ L+A Y + +A+R+F+ M + V PN T ++ + +G +D+ K
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 6/230 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + K G + F ++L + G + A +VFDE ++ +AW AL+ GYV+N
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGK 254
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA++ F MR G +TV + L A+A G GK H + G ++LD + +
Sbjct: 255 NEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNG-MELDNILGT 313
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L++ Y K G + A VFD M +DVV W+++++GYVQ +DAI + M + +
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRM--FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKL 371
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS-VELGTALVDM 259
+ TL +++SA A + L GK V Y C + S S + L + ++DM
Sbjct: 372 KYDCVTLATLMSAAARTENLKLGKEVQCY--CIRHSFESDIVLASTVMDM 419
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 112/239 (46%), Gaps = 41/239 (17%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVF-------------------------- 67
++F + D N L++A+A SG G A ++F
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 68 --DESS-----------VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
DE+ + ++I+WT ++NG V+N EA+ KM+ +G +A ++
Sbjct: 491 QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 550
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
L A A + G+ +HG+ ++ + + ++L+DMY KCG + A KVF Y
Sbjct: 551 VALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLY 610
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
S ++ + +++ Y ++AI ++ ++ + P+ T+T+VLSAC H+G ++Q
Sbjct: 611 S--ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQA 667
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 141/258 (54%), Gaps = 11/258 (4%)
Query: 7 EPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFK---LGFDLDRFAGNALISAFANSGFIGS 62
+PD T P+ LK + V MI+ + K LG DL + G++LI + G +
Sbjct: 57 KPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDL--YVGSSLIYMYIKCGRMIE 114
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLRAAA 121
A ++FDE DI+ W+++++G+ KN P +A++ F +M ++ D +T+++++ A
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
+ G+ VHGF ++ G D + ++L++ Y K +A +F + + +DV+
Sbjct: 175 KLSNSRLGRCVHGFVIRRG-FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI--AEKDVIS 231
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
WS ++A YVQ +A+ VF +M+ D PN T+ VL ACA + L+QG+ H+ +
Sbjct: 232 WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE-LA 290
Query: 242 CKKVSLNSVELGTALVDM 259
+K V++ TALVDM
Sbjct: 291 IRKGLETEVKVSTALVDM 308
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 4/211 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + GF D N+L++ +A S A +F + KD+I+W+ +I YV+N
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+EAL F M GT + TV+ VL+A A A D G+ H ++ G ++ + V +
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG-LETEVKVST 303
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDN 209
AL+DMY KC ++A VF +P +DVV W L++G+ +I F M L +N
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIP--RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
P+ + VL +C+ G L+Q K H Y+
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQAKCFHSYV 392
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 12/259 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G EP+ T +L+ + +E + + G + + AL+ +
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF-VKMRSTGTGVDALTVVSVLR 118
A VF KD+++W ALI+G+ N + +++ F + + T DA+ +V VL
Sbjct: 315 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ + G K H + ++ G + ++ ++L+++Y +CG +A KVF+ + + +D
Sbjct: 375 SCSELGFLEQAKCFHSYVIKYG-FDSNPFIGASLVELYSRCGSLGNASKVFNGI--ALKD 431
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNML-SDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
V W+ L+ GY K A+ F +M+ S V PNE T S+LSAC+H+G L+H
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG------LIH 485
Query: 238 QYIECKKVSLNSVELGTAL 256
+ + K+ +N L L
Sbjct: 486 EGLRIFKLMVNDYRLAPNL 504
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 3/179 (1%)
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A Q+F E + + + W L+ + E L F M D T+ L+A
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
+ N+G+ +HGF + + D YV S+L+ MY KCG +A ++FDE+ D+V W
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP--DIVTW 130
Query: 183 SVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
S +V+G+ + A+ F M ++ +V P+ TL +++SAC G+ VH ++
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
++ + K GFD + F G +L+ ++ G +G+A +VF+ ++KD + WT+LI GY +
Sbjct: 389 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 448
Query: 92 SEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++AL+ F M +S+ + +T +S+L A + AG + G + V R+ + ++
Sbjct: 449 TKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYA 508
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
L+D+ + G D A ++ MP+S + ++L A + N
Sbjct: 509 VLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQN 551
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 143/263 (54%), Gaps = 11/263 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M GVEPD T +++ ++ + ++ QI + FDLD N+L++ ++ G
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGD 252
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ S+ ++F++ + K+ ++WTA+I+ Y + + +AL+ F +M +G + +T+ SVL +
Sbjct: 253 LLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS---ALMDMYFKCGHCDDACKVFDEMPYSY 176
+ G GK VHGF V R +LD S AL+++Y +CG D V + S
Sbjct: 313 CGLIGLIREGKSVHGFAV---RRELDPNYESLSLALVELYAECGKLSDCETVLRVV--SD 367
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
R++V W+ L++ Y A+ +F M++ + P+ FTL S +SAC ++G + GK +
Sbjct: 368 RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H ++ VS V+ +L+DM
Sbjct: 428 HGHVIRTDVSDEFVQ--NSLIDM 448
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 123/229 (53%), Gaps = 3/229 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ +I K G D D +L+ + +G + A +VFD V+D++AW+ L++ ++N
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL+ F M G DA+T++SV+ A G + VHG + LD + +
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHG-QITRKMFDLDETLCN 241
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+ MY KCG + ++F+++ + ++ V W+ +++ Y + + A+R F M+ +
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKI--AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PN TL SVLS+C G + +GK VH + +++ N L ALV++
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVEL 348
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D F N+LI ++ SG + SA VF++ + ++ W +++ G+ +N EA+ F M
Sbjct: 438 DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
+ ++ +T ++V++A + G GKWVH + +G L + +AL+DMY KCG
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL--FTDTALIDMYAKCGDL 555
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
+ A VF M S ++ Y + AI F M+ PNE +VLS
Sbjct: 556 NAAETVFRAMSSRSIVSW--SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLS 613
Query: 223 ACAHSGALDQGKLVHQYIECKKVSLNS 249
AC HSG++++GK ++ VS NS
Sbjct: 614 ACGHSGSVEEGKYYFNLMKSFGVSPNS 640
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Query: 38 LGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKC 97
+GFD+ A N++I FA G I A +FDE ++ ++W ++I+G+V+N +AL
Sbjct: 188 IGFDV--VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDM 245
Query: 98 FVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYF 157
F +M+ D T+VS+L A A G G+W+H + V+ R +L+ V +AL+DMY
Sbjct: 246 FREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVR-NRFELNSIVVTALIDMYC 304
Query: 158 KCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTL 217
KCG ++ VF+ P + + CW+ ++ G + A+ +F + + P+ +
Sbjct: 305 KCGCIEEGLNVFECAP--KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSF 362
Query: 218 TSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
VL+ACAHSG + + + ++ K + S++ T +V++
Sbjct: 363 IGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNV 404
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 38/263 (14%)
Query: 31 IYAQIFKLGFDLDRFAGNALIS-AFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
I+A + K G D + +++ A+ + A VF + K+ W +I G+ ++
Sbjct: 44 IHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSS 103
Query: 90 LPSEALKCFVKMRSTGTGVDA--LTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
P A+ F+ M + V LT SV +A G G+ +HG ++ G ++ D +
Sbjct: 104 FPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEG-LEDDSF 162
Query: 148 VWSALMDMYF-------------------------------KCGHCDDACKVFDEMPYSY 176
+ + ++ MY KCG D A +FDEMP
Sbjct: 163 IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP--Q 220
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
R+ V W+ +++G+V+ +F+DA+ +F M +V P+ FT+ S+L+ACA+ GA +QG+ +
Sbjct: 221 RNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWI 280
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H+YI + LNS+ + TAL+DM
Sbjct: 281 HEYIVRNRFELNSIVV-TALIDM 302
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 10/205 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++K V+PD T LL + E I+ I + F+L+ ALI + G
Sbjct: 249 MQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGC 308
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I VF+ + K + W ++I G N A+ F ++ +G D+++ + VL A
Sbjct: 309 IEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Query: 120 AAMAGD----DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
A +G+ D F + + Y+ ++ ++ ++++ G ++A + MP
Sbjct: 369 CAHSGEVHRADEFFRLMKEKYMIEPSIKH----YTLMVNVLGGAGLLEEAEALIKNMPVE 424
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIR 200
D V WS L++ + + A R
Sbjct: 425 -EDTVIWSSLLSACRKIGNVEMAKR 448
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 107/207 (51%), Gaps = 5/207 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQ--IFKLGFDLDRFAGNALISAFANSG 58
M ++ ++ D T P +L F+ E A I K G+ + NAL+ +A G
Sbjct: 319 MHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRG 378
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ SA +VF+ KD+I+WTAL+ G N EALK F MR G D + SVL
Sbjct: 379 IMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A+A FG+ VHG Y+++G V ++L+ MY KCG +DA +F+ M RD
Sbjct: 439 ASAELTLLEFGQQVHGNYIKSG-FPSSLSVNNSLVTMYTKCGSLEDANVIFNSM--EIRD 495
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNM 205
++ W+ L+ GY + +DA R F +M
Sbjct: 496 LITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 8/262 (3%)
Query: 1 MRQKGVEPDQHTFP-LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+R++G + +Q+TFP +L S ++ I K GF + + +ALI +A
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCRE 277
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA + + V D+++W ++I G V+ L EAL F +M +D T+ S+L
Sbjct: 278 MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNC 337
Query: 120 AAMAGDD-NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A++ + H V+ G V +AL+DMY K G D A KVF+ M +D
Sbjct: 338 FALSRTEMKIASSAHCLIVKTGYATYK-LVNNALVDMYAKRGIMDSALKVFEGMI--EKD 394
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH- 237
V+ W+ LV G + +A+++F NM + P++ SVLSA A L+ G+ VH
Sbjct: 395 VISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHG 454
Query: 238 QYIECKKVSLNSVELGTALVDM 259
YI+ S S+ + +LV M
Sbjct: 455 NYIKSGFPS--SLSVNNSLVTM 474
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 5/229 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVE-DPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G++P+++T +L+M + V+ I+ K GFDLD N L++ +A
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 60 IGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I A +F+ K+ + WT+++ GY +N +A++CF +R G + T SVL
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A G VH V++G + + YV SAL+DMY KC + A + + M D
Sbjct: 236 ACASVSACRVGVQVHCCIVKSG-FKTNIYVQSALIDMYAKCREMESARALLEGMEVD--D 292
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VV W+ ++ G V+ +A+ +F M ++ ++FT+ S+L+ A S
Sbjct: 293 VVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALS 341
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 3/226 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
Q+F + D F N +I A++NS + A ++F + VK+ I+W ALI+GY K+ E
Sbjct: 49 QMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVE 108
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
A F +M+S G + T+ SVLR G+ +HG ++ G LD V + L+
Sbjct: 109 AFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTG-FDLDVNVVNGLL 167
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
MY +C +A +F+ M ++ V W+ ++ GY Q AI F ++ + N
Sbjct: 168 AMYAQCKRISEAEYLFETME-GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSN 226
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
++T SVL+ACA A G VH I N + + +AL+DM
Sbjct: 227 QYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTN-IYVQSALIDM 271
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 35/141 (24%)
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP-------------Y 174
FG +H + A R +L + L+ K G D+A ++FD+MP Y
Sbjct: 16 FGSCIHSY---ADRTKLHSNL---LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAY 69
Query: 175 S----------------YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
S ++ + W+ L++GY + +A +FW M SD + PNE+TL
Sbjct: 70 SNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLG 129
Query: 219 SVLSACAHSGALDQGKLVHQY 239
SVL C L +G+ +H +
Sbjct: 130 SVLRMCTSLVLLLRGEQIHGH 150
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 17/218 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR G+ PD+ +L ++ ++E ++ K GF N+L++ + G
Sbjct: 421 MRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGS 480
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +F+ ++D+I WT LI GY KN L +A + F MR+ V +T A
Sbjct: 481 LEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRT----VYGITPGPEHYA 536
Query: 120 AAMAGDDNFGKWVHGFYVQAGR------VQLDGYVWSALMDMYFKCGHCDDACKVFDE-M 172
+ D FG+ G +V+ + V+ D VW A++ K G+ ++ + M
Sbjct: 537 CMI---DLFGR--SGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLM 591
Query: 173 PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+ V + L Y + +A V M S N+
Sbjct: 592 ELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 115/259 (44%), Gaps = 32/259 (12%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ +I K D+ LIS ++ G A VF++ W +I N
Sbjct: 39 IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHK 98
Query: 91 PSEALKCFVKMR-STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
P EAL F+ M S + D T V++A + G VHG ++AG D +
Sbjct: 99 PREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFN-DVFFQ 157
Query: 150 SALMDMYFKCGHCDDACKVFDEMP-----------------------------YSYRDVV 180
+ LMD+YFKCG D KVFD+MP R+VV
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
W+ ++ YV+ + +A ++F M D+V PNEFT+ ++L A G+L G+ VH Y
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 241 ECKKVSLNSVELGTALVDM 259
L+ LGTAL+DM
Sbjct: 278 HKNGFVLDCF-LGTALIDM 295
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 10/199 (5%)
Query: 42 LDRFAGNALIS------AFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
D+ G +++S ++ + SA VF++ ++++++WTA+I YVKN P EA
Sbjct: 177 FDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAF 236
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
+ F +M+ + T+V++L+A+ G + G+WVH + + G V LD ++ +AL+DM
Sbjct: 237 QLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFV-LDCFLGTALIDM 295
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNE 214
Y KCG DA KVFD M + + W+ ++ ++A+ +F M + +V P+
Sbjct: 296 YSKCGSLQDARKVFDVM--QGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDA 353
Query: 215 FTLTSVLSACAHSGALDQG 233
T VLSACA++G + G
Sbjct: 354 ITFVGVLSACANTGNVKDG 372
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 126/240 (52%), Gaps = 9/240 (3%)
Query: 1 MRQKG-VEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M ++G PD+HTFP +LK + + ++ QI K GF D + N LI + + G
Sbjct: 141 MLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 200
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A +VFDE + +++W ++I+ V+ AL+ F +M+ + D T+ SVL
Sbjct: 201 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP-DGYTMQSVLS 259
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQ--LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
A A G + G W H F ++ V +D V ++L++MY KCG A +VF M
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM--QK 317
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNML--SDNVVPNEFTLTSVLSACAHSGALDQGK 234
RD+ W+ ++ G+ + ++A+ F M+ +NV PN T +L AC H G +++G+
Sbjct: 318 RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 377
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 11 HTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDES 70
H F L +P +Y +I +L S+F++ + A +VFD
Sbjct: 68 HAFTLRTTYPEEPAT---LFLYGKILQLS------------SSFSDVNY---AFRVFDSI 109
Query: 71 SVKDIIAWTALINGYVKN-DLPSEALKCFVKMRSTG-TGVDALTVVSVLRAAAMAGDDNF 128
W LI + EA + KM G + D T VL+A A +
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 169
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
GK VH V+ G D YV + L+ +Y CG D A KVFDEMP R +V W+ ++
Sbjct: 170 GKQVHCQIVKHG-FGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPE--RSLVSWNSMIDA 226
Query: 189 YVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
V+ ++ A+++F M + P+ +T+ SVLSACA G+L G H ++
Sbjct: 227 LVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 128/242 (52%), Gaps = 4/242 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +G +P+ +T L P ++ + ++A K+ D + G AL++ ++
Sbjct: 198 MQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMC 257
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I SAC VF+ S D++A ++LI GY + EAL F ++R +G D + V VL +
Sbjct: 258 IASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGS 317
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A D GK VH + ++ G ++LD V SAL+DMY KCG A +F +P +++
Sbjct: 318 CAELSDSVSGKEVHSYVIRLG-LELDIKVCSALIDMYSKCGLLKCAMSLFAGIP--EKNI 374
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V ++ L+ G A F +L ++P+E T +++L C HSG L++G+ + +
Sbjct: 375 VSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFER 434
Query: 240 IE 241
++
Sbjct: 435 MK 436
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 11/258 (4%)
Query: 6 VEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
PD T+ L + FS+ + I+ G D+ G+A++ A++ +G I A
Sbjct: 102 TRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEAS 161
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
++F D+ W +I GY + + F M+ G + T+V+ L + +
Sbjct: 162 KLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVA-LTSGLIDP 220
Query: 125 DDNFGKW-VHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
W VH F + ++ LD YV AL++MY +C AC VF+ + S D+V
Sbjct: 221 SLLLVAWSVHAFCL---KINLDSHSYVGCALVNMYSRCMCIASACSVFNSI--SEPDLVA 275
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
S L+ GY +C ++A+ +F + P+ + VL +CA GK VH Y+
Sbjct: 276 CSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVI 335
Query: 242 CKKVSLNSVELGTALVDM 259
+ L+ +++ +AL+DM
Sbjct: 336 RLGLELD-IKVCSALIDM 352
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
SA ++FD + + W ++I Y K + L F ++ + T D T + R +
Sbjct: 58 SARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS 117
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
+ D + +HG + +G + D SA++ Y K G +A K+F +P D+
Sbjct: 118 ESFDTKGLRCIHGIAIVSG-LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDP--DLAL 174
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
W+V++ GY C + I +F M PN +T+ ++ S L VH +
Sbjct: 175 WNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAF-- 232
Query: 242 CKKVSLNSVE-LGTALVDM 259
C K++L+S +G ALV+M
Sbjct: 233 CLKINLDSHSYVGCALVNM 251
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 4/231 (1%)
Query: 31 IYAQIFKLG-FDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
I+ + K G F D ++ + + A +VFDE D++ W L+NGYV+
Sbjct: 138 IHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
L SE L+ F +M G D +V + L A A G GKW+H F + ++ D +V
Sbjct: 198 LGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVG 257
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSD 208
+AL+DMY KCG + A +VF ++ + R+V W+ L+ GY + A+ + D
Sbjct: 258 TALVDMYAKCGCIETAVEVFKKL--TRRNVFSWAALIGGYAAYGYAKKAMTCLERLERED 315
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ P+ L VL+ACAH G L++G+ + + +E + E + +VD+
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDL 366
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 117/228 (51%), Gaps = 9/228 (3%)
Query: 39 GFDLDRFAGNALISAFAN----SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
G + +A + L++AF + + A +FD + + + +I ++ P
Sbjct: 38 GLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLG 97
Query: 95 LKCF---VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
L+ F VK LT ++ A A + GK +H + V+ G D +V +
Sbjct: 98 LRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTG 157
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
++ +Y + DA KVFDE+P DVV W VL+ GYV+C + + VF ML +
Sbjct: 158 VLRIYVEDKLLLDARKVFDEIPQP--DVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE 215
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+EF++T+ L+ACA GAL QGK +H++++ K + V +GTALVDM
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDM 263
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 26/202 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK--PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M KG+EPD+ + L ++ + + ++ K + D F G AL+ +A G
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCG 268
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVL 117
I +A +VF + + +++ +W ALI GY +A+ C ++ R G D++ ++ VL
Sbjct: 269 CIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVL 328
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-----------WSALMDMYFKCGHCDDAC 166
A A HG +++ GR L+ +S ++D+ + G DDA
Sbjct: 329 AACA-----------HGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 167 KVFDEMPYSYRDVVCWSVLVAG 188
+ ++MP V W L+ G
Sbjct: 378 NLIEKMPMKPLASV-WGALLNG 398
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 120/211 (56%), Gaps = 3/211 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + K G L+ F G++LI ++ G A +VF S ++++AW ++I+ Y +N+L
Sbjct: 498 VHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNL 557
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P ++ F M S G D++++ SVL A + GK +HG+ ++ G + D ++ +
Sbjct: 558 PELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG-IPSDTHLKN 616
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMY KCG A +F +M ++ ++ W++++ GY A+ +F M
Sbjct: 617 ALIDMYVKCGFSKYAENIFKKM--QHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE 674
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
P++ T S++SAC HSG +++GK + ++++
Sbjct: 675 SPDDVTFLSLISACNHSGFVEEGKNIFEFMK 705
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 121/231 (52%), Gaps = 6/231 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + K+G D + +L+S ++ G +G A VF K + W A++ Y +ND
Sbjct: 294 IHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDY 353
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
AL F MR D+ T+ +V+ ++ G N+GK VH + +Q + S
Sbjct: 354 GYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIES 412
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN- 209
AL+ +Y KCG DA VF M +D+V W L++G + KF++A++VF +M D+
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSM--EEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDD 470
Query: 210 -VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ P+ +TSV +ACA AL G VH + + LN V +G++L+D+
Sbjct: 471 SLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLN-VFVGSSLIDL 520
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 118/238 (49%), Gaps = 16/238 (6%)
Query: 12 TFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE- 69
TFP LLK S + I+ + LG+ D F +L++ + GF+ A QVFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 70 ------SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
S +D+ W ++I+GY K E + CF +M G DA ++ V+ + M
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVV--SVMC 179
Query: 124 GDDNF----GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ NF GK +HGF ++ + D ++ +AL+DMYFK G DA +VF E+ +V
Sbjct: 180 KEGNFRREEGKQIHGFMLR-NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIE-DKSNV 237
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
V W+V++ G+ + ++ ++ +++V + T L AC+ S G+ +H
Sbjct: 238 VLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIH 295
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 86/156 (55%), Gaps = 9/156 (5%)
Query: 111 LTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFD 170
T S+L+A + + ++GK +HG V G + D ++ ++L++MY KCG D A +VFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGW-RYDPFIATSLVNMYVKCGFLDYAVQVFD 119
Query: 171 -----EMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
+ S RDV W+ ++ GY + +F++ + F ML V P+ F+L+ V+S
Sbjct: 120 GWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 226 HSGAL--DQGKLVHQYIECKKVSLNSVELGTALVDM 259
G ++GK +H ++ + +S L TAL+DM
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSF-LKTALIDM 214
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 1 MRQKGVEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +G+ PD + +L+ + S + ++ +LG D NALI + GF
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A +F + K +I W +I GY + AL F +M+ G D +T +S++ A
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+G GK + F Q ++ + ++ ++D+ + G ++A MP
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMP 741
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 128/230 (55%), Gaps = 6/230 (2%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSG-FIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+A + K G + DR GN+L+S + G + +VFD VKD I+WT++++GYV
Sbjct: 84 HAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKE 143
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL+ FV+M S G + T+ S ++A + G+ G+ HG + G + + ++ S
Sbjct: 144 HVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHG-FEWNHFISS 202
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDN 209
L +Y DA +VFDEMP DV+CW+ +++ + + + +++A+ +F+ M
Sbjct: 203 TLAYLYGVNREPVDARRVFDEMPEP--DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKG 260
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+VP+ T +VL+AC + L QGK +H + + N V + ++L+DM
Sbjct: 261 LVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV-VESSLLDM 309
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 123/234 (52%), Gaps = 8/234 (3%)
Query: 2 RQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
R KG+ PD TF +L ++ I+ ++ G + ++L+ + G +
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A QVF+ S K+ ++W+AL+ GY +N +A++ F +M D +VL+A
Sbjct: 317 REARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKAC 372
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
A GK +HG YV+ G + V SAL+D+Y K G D A +V+ +M S R+++
Sbjct: 373 AGLAAVRLGKEIHGQYVRRGCFG-NVIVESALIDLYGKSGCIDSASRVYSKM--SIRNMI 429
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
W+ +++ Q + ++A+ F +M+ + P+ + ++L+AC H+G +D+G+
Sbjct: 430 TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGR 483
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ Q + G + +ALI + SG I SA +V+ + S++++I W A+++ +N
Sbjct: 384 IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGR 443
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA+ F M G D ++ +++L A G + G+ ++ ++ +S
Sbjct: 444 GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYS 503
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
++D+ + G ++A + E D W VL+ C DA RV
Sbjct: 504 CMIDLLGRAGLFEEAENLL-ERAECRNDASLWGVLLG---PCAANADASRV 550
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 13/260 (5%)
Query: 5 GVEPDQHTFPLLLKMFSK--PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
G++PDQ+T +LK S + ++ K+ D F ALI A++ + +
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A +F+ + D++AW A++ GY ++ + LK F M G D T+ +V +
Sbjct: 471 AEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 529
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
N GK VH + +++G LD +V S ++DMY KCG A FD +P D V W
Sbjct: 530 LFAINQGKQVHAYAIKSG-YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP--DDVAW 586
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
+ +++G ++ + + A VF M V+P+EFT+ ++ A + AL+QG+ +H
Sbjct: 587 TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH----A 642
Query: 243 KKVSLNSVE---LGTALVDM 259
+ LN +GT+LVDM
Sbjct: 643 NALKLNCTNDPFVGTSLVDM 662
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 123/244 (50%), Gaps = 12/244 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQI----FKLGFDLDRFAGNALISAFAN 56
M + VE DQ TF L+L + V D + Q+ KLG DL N+LI+ +
Sbjct: 306 MVESDVECDQVTFILML---ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G A VFD S +D+I+W ++I G +N L EA+ F+++ G D T+ SV
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 117 LRAAAMAGDD-NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
L+AA+ + + K VH ++ V D +V +AL+D Y + +A +F+ +
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVS-DSFVSTALIDAYSRNRCMKEAEILFERHNF- 480
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
D+V W+ ++AGY Q + +++F M ++FTL +V C A++QGK
Sbjct: 481 --DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ 538
Query: 236 VHQY 239
VH Y
Sbjct: 539 VHAY 542
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 10/237 (4%)
Query: 1 MRQKGVEPDQHTFPLLLK----MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M ++G D T + K +F+ + ++A K G+DLD + + ++ +
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFA---INQGKQVHAYAIKSGYDLDLWVSSGILDMYVK 564
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G + +A FD V D +AWT +I+G ++N A F +MR G D T+ ++
Sbjct: 565 CGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATL 624
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
+A++ G+ +H ++ D +V ++L+DMY KCG DDA +F +
Sbjct: 625 AKASSCLTALEQGRQIHANALKLNCTN-DPFVGTSLVDMYAKCGSIDDAYCLFKRI--EM 681
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++ W+ ++ G Q + ++ +++F M S + P++ T VLSAC+HSG + +
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA 738
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 100/193 (51%), Gaps = 12/193 (6%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN--- 88
+A+I + +RF N LIS ++ G + A +VFD+ +D+++W +++ Y ++
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 89 --DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG 146
+ +A F +R +T+ +L+ +G + HG+ A ++ LDG
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY---ACKIGLDG 178
Query: 147 --YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+V AL+++Y K G + +F+EMP YRDVV W++++ Y++ ++AI +
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMP--YRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 205 MLSDNVVPNEFTL 217
S + PNE TL
Sbjct: 237 FHSSGLNPNEITL 249
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 9/207 (4%)
Query: 55 ANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
+++G + S D SSV +II ++ Y+ + S LKCF M + D +T +
Sbjct: 260 SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFI 319
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+L A G+ VH ++ G + L V ++L++MY K A VFD M
Sbjct: 320 LMLATAVKVDSLALGQQVHCMALKLG-LDLMLTVSNSLINMYCKLRKFGFARTVFDNM-- 376
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
S RD++ W+ ++AG Q +A+ +F +L + P+++T+TSVL A + +L +G
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA---ASSLPEGL 433
Query: 235 LVHQYIECKKVSLNSVE---LGTALVD 258
+ + + + +N+V + TAL+D
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALID 460
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
LR A + D GK H + + ++ + L+ MY KCG A +VFD+MP
Sbjct: 46 LRNAITSSDLMLGKCTHA-RILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD-- 102
Query: 177 RDVVCWSVLVAGYVQCNK-----FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
RD+V W+ ++A Y Q ++ Q A +F + D V + TL+ +L C HSG +
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 232 QGKLVHQYIECK 243
+ H Y CK
Sbjct: 163 ASESFHGY-ACK 173
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +I+ +A G I A +FD+ +D ++W A+I GY ++ EAL+ FV+M G
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
++ + S L A GK +HG V+ G + +V +AL+ MY KCG ++A
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGG-YETGCFVGNALLLMYCKCGSIEEAND 465
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+F EM + +D+V W+ ++AGY + + A+R F +M + + P++ T+ +VLSAC+H+
Sbjct: 466 LFKEM--AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 228 GALDQGK 234
G +D+G+
Sbjct: 524 GLVDKGR 530
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 33/201 (16%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +I+ +A SG I A Q+FDES V+D+ WTA+++GY++N + EA + F KM
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN-- 311
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL-----------DGYVWSALMDMY 156
V A +AG YVQ R+++ + W+ ++ Y
Sbjct: 312 -------EVSWNAMLAG-----------YVQGERMEMAKELFDVMPCRNVSTWNTMITGY 353
Query: 157 FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
+CG +A +FD+MP RD V W+ ++AGY Q +A+R+F M + N +
Sbjct: 354 AQCGKISEAKNLFDKMP--KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 217 LTSVLSACAHSGALDQGKLVH 237
+S LS CA AL+ GK +H
Sbjct: 412 FSSALSTCADVVALELGKQLH 432
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++G ++ +F L + V +E ++ ++ K G++ F GNAL+ + G
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +F E + KDI++W +I GY ++ AL+ F M+ G D T+V+VL A
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G + G+ Q V + ++ ++D+ + G +DA + MP+ D
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE-PDA 578
Query: 180 VCWSVLVA 187
W L+
Sbjct: 579 AIWGTLLG 586
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F++ + D + N ++S +A +G + A VFD K+ ++W AL++ YV+N E
Sbjct: 147 ELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEE 206
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY------ 147
A F K R AL + L G +V + R D
Sbjct: 207 ACMLF-KSRENW----ALVSWNCL----------LGGFVKKKKIVEARQFFDSMNVRDVV 251
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
W+ ++ Y + G D+A ++FDE P +DV W+ +V+GY+Q ++A +F M
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESP--VQDVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
NE + ++L+ ++ K + + C+ VS
Sbjct: 310 ----RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS 344
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +IS + +G A ++FDE +D+++W +I GYV+N +A + F M
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER--- 155
Query: 108 VDALTVVSVLRAAAMAG-------------DDNFGKW--VHGFYVQAGRVQLDGYV---- 148
D + ++L A G + N W + YVQ +++ +
Sbjct: 156 -DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 149 -------WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
W+ L+ + K +A + FD M + RDVV W+ ++ GY Q K +A ++
Sbjct: 215 ENWALVSWNCLLGGFVKKKKIVEARQFFDSM--NVRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK-LVHQYIECKKVSLNSVELG 253
F ++ V + FT T+++S + +++ + L + E +VS N++ G
Sbjct: 273 F----DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAG 321
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N IS++ +G A +VF +++ +I+GY++N A K F +M
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ + +R + N GK F + R D W+ ++ Y + G DDA
Sbjct: 128 SWNVMIKGYVR------NRNLGKARELFEIMPER---DVCSWNTMLSGYAQNGCVDDARS 178
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF-----WNMLSDNVVPNEF 215
VFD MP ++ V W+ L++ YVQ +K ++A +F W ++S N + F
Sbjct: 179 VFDRMP--EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 116/226 (51%), Gaps = 11/226 (4%)
Query: 17 LKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDII 76
+ + KPV E+ I Q+ + +F N+ + + N+G + +A QVFD+ DI+
Sbjct: 19 ISLLQKPVEENIVRISNQV------MVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIV 72
Query: 77 AWTALINGYVKNDLPSEALKCFVKMRSTGTGV--DALTVVSVLRAAAMAGDDNFGKWVHG 134
+WT++I YV + EAL F MR V D + VL+A + + +G+ +H
Sbjct: 73 SWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHA 132
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
+ V+ + YV S+L+DMY + G D +C+VF EMP +R+ V W+ ++ G V +
Sbjct: 133 YAVKTSLLS-SVYVGSSLLDMYKRVGKIDKSCRVFSEMP--FRNAVTWTAIITGLVHAGR 189
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+++ + F M + + +T L ACA + GK +H ++
Sbjct: 190 YKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 10/237 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM----IYAQIFKLGFDLDRFAGNALISAFAN 56
MR V P++ TF MFS + ++ + LG + N+++ ++
Sbjct: 301 MRNSQVPPNEQTFA---SMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYST 357
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
G + SA +F +DII+W+ +I GY + E K F MR +GT + S+
Sbjct: 358 CGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASL 417
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L + G+ VH + G ++ + V S+L++MY KCG +A +F E
Sbjct: 418 LSVSGNMAVIEGGRQVHALALCFG-LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRD- 475
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D+V + ++ GY + K ++AI +F L P+ T SVL+AC HSG LD G
Sbjct: 476 -DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 11/259 (4%)
Query: 5 GVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
V PD ++LK + + ++A K + G++L+ + G I +
Sbjct: 103 AVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
C+VF E ++ + WTA+I G V E L F +M + D T L+A A
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
+GK +H + G V V ++L MY +CG D +F+ M S RDVV W+
Sbjct: 223 RQVKYGKAIHTHVIVRGFVT-TLCVANSLATMYTECGEMQDGLCLFENM--SERDVVSWT 279
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
L+ Y + + A+ F M + V PNE T S+ SACA L G+ +H C
Sbjct: 280 SLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH----CN 335
Query: 244 KVSL---NSVELGTALVDM 259
+SL +S+ + +++ M
Sbjct: 336 VLSLGLNDSLSVSNSMMKM 354
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 119/252 (47%), Gaps = 5/252 (1%)
Query: 9 DQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF 67
D +TF + LK + V+ I+ + GF N+L + + G + +F
Sbjct: 208 DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLF 267
Query: 68 DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN 127
+ S +D+++WT+LI Y + +A++ F+KMR++ + T S+ A A
Sbjct: 268 ENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLV 327
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
+G+ +H + G + V +++M MY CG+ A +F M RD++ WS ++
Sbjct: 328 WGEQLHCNVLSLG-LNDSLSVSNSMMKMYSTCGNLVSASVLFQGM--RCRDIISWSTIIG 384
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL 247
GY Q ++ + F M P +F L S+LS + ++ G+ VH C +
Sbjct: 385 GYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ 444
Query: 248 NSVELGTALVDM 259
NS + ++L++M
Sbjct: 445 NST-VRSSLINM 455
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 1/188 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MRQ G +P LL + V+E ++A G + + ++LI+ ++ G
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +F E+ DI++ TA+INGY ++ EA+ F K G D++T +SVL A
Sbjct: 462 IKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTA 521
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+G + G + ++ + ++D+ + G DA K+ +EM + DV
Sbjct: 522 CTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDV 581
Query: 180 VCWSVLVA 187
V ++L+A
Sbjct: 582 VWTTLLIA 589
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT- 106
+I + N I +A ++FD +++++W +I GY +N P E ++ F +M++T +
Sbjct: 211 TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSL 270
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D +T++SVL A + G + G+W H F VQ ++ V +A++DMY KCG + A
Sbjct: 271 DPDDVTILSVLPAISDTGALSLGEWCHCF-VQRKKLDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
++FDEMP + V W+ ++ GY + A+ +F M+ + P+E T+ +V++AC H
Sbjct: 330 RIFDEMP--EKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNH 386
Query: 227 SGALDQGK 234
G +++G+
Sbjct: 387 GGLVEEGR 394
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 126/254 (49%), Gaps = 13/254 (5%)
Query: 8 PDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD TF L K S + V +++QI++ GF D + ++ +A G +G A
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNA 135
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
FDE + ++WTALI+GY++ A K F +M D + +++ +GD
Sbjct: 136 FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDM 192
Query: 127 NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLV 186
+ + + W+ ++ Y D A K+FD MP R++V W+ ++
Sbjct: 193 TSARRLFDEMTHKTVI-----TWTTMIHGYCNIKDIDAARKLFDAMP--ERNLVSWNTMI 245
Query: 187 AGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
GY Q + Q+ IR+F M + + P++ T+ SVL A + +GAL G+ H +++ KK+
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKL 305
Query: 246 SLNSVELGTALVDM 259
V++ TA++DM
Sbjct: 306 D-KKVKVCTAILDM 318
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
A++ ++ G I A ++FDE K + +W A+I+GY N AL FV M
Sbjct: 313 TAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEK 371
Query: 108 VDALTVVSVLRAAAMAGDDNFG-KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D +T+++V+ A G G KW H +++ Y ++D+ + G +A
Sbjct: 372 PDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHY--GCMVDLLGRAGSLKEAE 429
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
+ MP+ ++ S L A C +++D R
Sbjct: 430 DLITNMPFEPNGIILSSFLSA----CGQYKDIER 459
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 110/205 (53%), Gaps = 4/205 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F + D + LI+A+A G + A ++F+ KD++AWTA++ G+ +N P E
Sbjct: 205 KVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQE 264
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-WSAL 152
AL+ F +M +G D +TV + A A G + ++G D V SAL
Sbjct: 265 ALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSAL 324
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN-VV 211
+DMY KCG+ ++A VF M + ++V +S ++ G + Q+A+ +F M++ +
Sbjct: 325 IDMYSKCGNVEEAVNVF--MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIK 382
Query: 212 PNEFTLTSVLSACAHSGALDQGKLV 236
PN T L AC+HSG +DQG+ V
Sbjct: 383 PNTVTFVGALMACSHSGLVDQGRQV 407
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 41/265 (15%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGS--ACQVFDESSVKDIIAWTALINGYVKN 88
I+ + + G D + LI G A +V + ++ WTA+I GY
Sbjct: 68 IHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIE 127
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG-- 146
EA+ + MR + T ++L+A D N G+ H A +L G
Sbjct: 128 GKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH-----AQTFRLRGFC 182
Query: 147 --YVWSALMDMYFKCGHCDDACKVFDEMP-----------------------------YS 175
YV + ++DMY KC D A KVFDEMP
Sbjct: 183 FVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLP 242
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+D+V W+ +V G+ Q K Q+A+ F M + +E T+ +SACA GA
Sbjct: 243 TKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADR 302
Query: 236 VHQYIECKKVSL-NSVELGTALVDM 259
Q + S + V +G+AL+DM
Sbjct: 303 AVQIAQKSGYSPSDHVVIGSALIDM 327
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 121/233 (51%), Gaps = 5/233 (2%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
+++ KLGF D F N L+ ++ I +A ++FDE ++++WT++I+GY
Sbjct: 50 LLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 90 LPSEALKCFVKMRS-TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
P AL F KM + T SV +A + + GK +H +G ++ + V
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISG-LRRNIVV 168
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF--WNML 206
S+L+DMY KC + A +VFD M R+VV W+ ++ Y Q + +AI +F +N
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ N+F L SV+SAC+ G L GK+ H + N+V + T+L+DM
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTV-VATSLLDM 280
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 118/236 (50%), Gaps = 10/236 (4%)
Query: 4 KGVEPDQHTFPLLLKMFSKPVVEDPF--MIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
+ V P+++TF + K S + E I+A++ G + ++L+ + +
Sbjct: 125 RPVPPNEYTFASVFKACS-ALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVE 183
Query: 62 SACQVFDE--SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS--TGTGVDALTVVSVL 117
+A +VFD +++++WT++I Y +N EA++ F + T + + SV+
Sbjct: 184 TARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVI 243
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + G +GK HG + G + + V ++L+DMY KCG A K+F +
Sbjct: 244 SACSSLGRLQWGKVAHGLVTRGG-YESNTVVATSLLDMYAKCGSLSCAEKIF--LRIRCH 300
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
V+ ++ ++ + + A+++F M++ + PN TL VL AC+HSG +++G
Sbjct: 301 SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEG 356
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 133/259 (51%), Gaps = 9/259 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M G+ PD TFP +LK + V D I+ K GF D + +LI ++ +
Sbjct: 144 MLSSGLTPDYRTFPSVLK--ACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
G+A +FDE V+D+ +W A+I+GY ++ EAL +R+ +D++TVVS+L A
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSAC 257
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
AGD N G +H + ++ G ++ + +V + L+D+Y + G D KVFD M RD++
Sbjct: 258 TEAGDFNRGVTIHSYSIKHG-LESELFVSNKLIDLYAEFGRLRDCQKVFDRM--YVRDLI 314
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
W+ ++ Y + AI +F M + P+ TL S+ S + G + + V +
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT 374
Query: 241 ECKKVSLNSVELGTALVDM 259
K L + +G A+V M
Sbjct: 375 LRKGWFLEDITIGNAVVVM 393
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 6/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFA-GNALISAFANSG 58
MR ++PD T L + S+ + + + G+ L+ GNA++ +A G
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT-GVDALTVVSVL 117
+ SA VF+ D+I+W +I+GY +N SEA++ + M G + T VSVL
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + AG G +HG ++ G + LD +V ++L DMY KCG +DA +F ++P
Sbjct: 459 PACSQAGALRQGMKLHGRLLKNG-LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV-- 515
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ V W+ L+A + + A+ +F ML + V P+ T ++LSAC+HSG +D+G+
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF 575
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ ++ S++ +VDM
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDM 597
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 124/231 (53%), Gaps = 6/231 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I++ K G + + F N LI +A G + +VFD V+D+I+W ++I Y N+
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P A+ F +MR + D LT++S+ + GD + V GF ++ G D + +
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-- 208
A++ MY K G D A VF+ +P + DV+ W+ +++GY Q +AI ++ N++ +
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNT--DVISWNTIISGYAQNGFASEAIEMY-NIMEEEG 445
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ N+ T SVL AC+ +GAL QG +H + + L+ V + T+L DM
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD-VFVVTSLADM 495
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 11/191 (5%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF-VKMRSTGTGV 108
L++ + G + A FD +D+ AW +I+GY + SE ++CF + M S+G
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
D T SVL+A D G +H ++ G D YV ++L+ +Y + +A +
Sbjct: 152 DYRTFPSVLKACRTVID---GNKIHCLALKFG-FMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
FDEMP RD+ W+ +++GY Q ++A+ + + + + V T+ S+LSAC +G
Sbjct: 208 FDEMP--VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSV----TVVSLLSACTEAG 261
Query: 229 ALDQGKLVHQY 239
++G +H Y
Sbjct: 262 DFNRGVTIHSY 272
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 126/236 (53%), Gaps = 7/236 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV P++ TF L+ +++ I+ K GF + GN+ I+ +A
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEA 422
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A + F++ + ++II+W A+I+G+ +N EALK F+ + T + T SVL A
Sbjct: 423 LEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNA 481
Query: 120 AAMAGDDNF--GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A A D + G+ H ++ G + V SAL+DMY K G+ D++ KVF+EM S +
Sbjct: 482 IAFAEDISVKQGQRCHAHLLKLG-LNSCPVVSSALLDMYAKRGNIDESEKVFNEM--SQK 538
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ W+ +++ Y F+ + +F M+ +NV P+ T SVL+AC G +D+G
Sbjct: 539 NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKG 594
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 118/242 (48%), Gaps = 16/242 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQ----IFKLGFDLDRFAGNALISAFAN 56
M+ GV D T+ L S V + F++ Q + K G + D GN+ I+ ++
Sbjct: 165 MKSAGVVFDAFTYSTAL---SFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSR 221
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKN-DLPSEALKCFVKMRSTGTGVDALTVVS 115
SG A +VFDE S KD+I+W +L++G + EA+ F M G +D ++ S
Sbjct: 222 SGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTS 281
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ D + +HG ++ G L V + LM Y KCG + VF +M S
Sbjct: 282 VITTCCHETDLKLARQIHGLCIKRGYESLL-EVGNILMSRYSKCGVLEAVKSVFHQM--S 338
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
R+VV W+ +++ NK DA+ +F NM D V PNE T +++A + + +G
Sbjct: 339 ERNVVSWTTMISS----NK-DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK 393
Query: 236 VH 237
+H
Sbjct: 394 IH 395
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NA++ + +G +A +F+ D+++W +++G+ N + AL V+M+S G
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVV 171
Query: 108 VDALTVVSVLRAAAMAGDDNF--GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
DA T + L + G + F G + V+ G ++ D V ++ + MY + G A
Sbjct: 172 FDAFTYSTAL--SFCVGSEGFLLGLQLQSTVVKTG-LESDLVVGNSFITMYSRSGSFRGA 228
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQ-DAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
+VFDEM S++D++ W+ L++G Q F +A+ +F +M+ + V + + TSV++ C
Sbjct: 229 RRVFDEM--SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
Query: 225 AHSGALDQGKLVH 237
H L + +H
Sbjct: 287 CHETDLKLARQIH 299
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 8 PDQHTFPLLLKM--FSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
P+++TF +L F++ + V+ +A + KLG + +AL+ +A G I +
Sbjct: 470 PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESE 529
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
+VF+E S K+ WT++I+ Y + + F KM D +T +SVL A G
Sbjct: 530 KVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKG 589
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+ G + ++ ++ +S ++DM + G +A ++ E+P
Sbjct: 590 MVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F ++ D + N+L+S +A G + A +F K I++WTA+I+GY E
Sbjct: 165 KVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVE 224
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
A+ F +M+ G D ++++SVL + A G GKW+H + + G ++ G V +AL+
Sbjct: 225 AMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTG-VCNALI 283
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
+MY KCG A ++F +M +DV+ WS +++GY AI F M V PN
Sbjct: 284 EMYSKCGVISQAIQLFGQM--EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPN 341
Query: 214 EFTLTSVLSACAHSGALDQG 233
T +LSAC+H G +G
Sbjct: 342 GITFLGLLSACSHVGMWQEG 361
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 122/279 (43%), Gaps = 46/279 (16%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS--------------ACQVFDES 70
VE+ F+ + Q K + + + +I + S F+ + A ++F++
Sbjct: 9 VENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQV 68
Query: 71 SVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFG 129
S ++ + ++I Y N L + ++ + ++ R + D T + ++ A G G
Sbjct: 69 SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLG 128
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM-------------PYSY 176
K VHG + G + +AL+DMY K DA KVFDEM Y+
Sbjct: 129 KQVHGHLCKFGP-RFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 187
Query: 177 ----------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSV 220
+ +V W+ +++GY + +A+ F M + P+E +L SV
Sbjct: 188 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 247
Query: 221 LSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L +CA G+L+ GK +H Y E ++ L + AL++M
Sbjct: 248 LPSCAQLGSLELGKWIHLYAE-RRGFLKQTGVCNALIEM 285
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 131/270 (48%), Gaps = 35/270 (12%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPF-MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G+ P HTF + + P ++++Q F+ GF+ D F LI+A+A G + A
Sbjct: 77 GLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCA 136
Query: 64 CQVFDESSVKDI-------------------------------IAWTALINGYVKNDLPS 92
+VFDE S +D+ +WT +I+G+ +N S
Sbjct: 137 RRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYS 196
Query: 93 EALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
EALK F+ M + + +TVVSVL A A G+ G+ + G+ + G + YV +A
Sbjct: 197 EALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFD-NIYVCNA 255
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
++MY KCG D A ++F+E+ + R++ W+ ++ K +A+ +F ML +
Sbjct: 256 TIEMYSKCGMIDVAKRLFEELG-NQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEK 314
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
P+ T +L AC H G + +G+ + + +E
Sbjct: 315 PDAVTFVGLLLACVHGGMVVKGQELFKSME 344
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 35/209 (16%)
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A ++FD + LI Y + P E++ + + G T + A+A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
+ +H + ++G + D + + L+ Y K G A +VFDEM S RDV W
Sbjct: 95 FSSARPLRLLHSQFFRSG-FESDSFCCTTLITAYAKLGALCCARRVFDEM--SKRDVPVW 151
Query: 183 SVLVAGY-------------------------------VQCNKFQDAIRVFWNMLSD-NV 210
+ ++ GY Q + +A+++F M D +V
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQY 239
PN T+ SVL ACA+ G L+ G+ + Y
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGY 240
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 3/202 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D ++ + + A +VFDE D++ W L+NGYV+ L SE L+ F +M
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML 210
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G D +V + L A A G GKW+H F + ++ D +V +AL+DMY KCG
Sbjct: 211 VRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCI 270
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVL 221
+ A +VF+++ + R+V W+ L+ GY + A + D + P+ L VL
Sbjct: 271 ETAVEVFEKL--TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVL 328
Query: 222 SACAHSGALDQGKLVHQYIECK 243
+ACAH G L++G+ + + +E +
Sbjct: 329 AACAHGGFLEEGRTMLENMEAR 350
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 119/228 (52%), Gaps = 9/228 (3%)
Query: 39 GFDLDRFAGNALISAFAN----SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
G + +A + L++AF + + A +FD + + + +I ++ P
Sbjct: 38 GLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLG 97
Query: 95 LKCF---VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
L+ F VK LT ++ A A + GK +H + V+ G DG+V +
Sbjct: 98 LRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTG 157
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
++ +Y + DA KVFDE+P DVV W VL+ GYV+C + + VF ML +
Sbjct: 158 VLRIYVEDKLLFDARKVFDEIPQP--DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+EF++T+ L+ACA GAL QGK +H++++ K+ + V +GTALVDM
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDM 263
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 26/202 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK--PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M +G+EPD+ + L ++ + + ++ K + D F G AL+ +A G
Sbjct: 209 MLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCG 268
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVL 117
I +A +VF++ + +++ +W ALI GY +A C ++ R G D++ ++ VL
Sbjct: 269 CIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVL 328
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-----------WSALMDMYFKCGHCDDAC 166
A A HG +++ GR L+ +S ++D+ + G DDA
Sbjct: 329 AACA-----------HGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 167 KVFDEMPYSYRDVVCWSVLVAG 188
+ ++MP V W L+ G
Sbjct: 378 DLIEKMPMKPLASV-WGALLNG 398
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 108/203 (53%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+AQ GF D NAL++ ++ G I + F+++ D IAW AL++G+ ++
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL+ FV+M G + T S ++AA+ + GK VH + G + V +
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG-YDSETEVCN 731
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+ MY KCG DA K F E+ S ++ V W+ ++ Y + +A+ F M+ NV
Sbjct: 732 ALISMYAKCGSISDAEKQFLEV--STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV 789
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
PN TL VLSAC+H G +D+G
Sbjct: 790 RPNHVTLVGVLSACSHIGLVDKG 812
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 11/244 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKM-----FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFA 55
M + V P++ TF +L+ + VVE I+A+I G N LI ++
Sbjct: 177 MVSENVTPNEGTFSGVLEACRGGSVAFDVVEQ---IHARILYQGLRDSTVVCNPLIDLYS 233
Query: 56 NSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+GF+ A +VFD +KD +W A+I+G KN+ +EA++ F M G S
Sbjct: 234 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 293
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
VL A G+ +HG ++ G D YV +AL+ +YF G+ A +F M S
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSLYFHLGNLISAEHIFSNM--S 350
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
RD V ++ L+ G QC + A+ +F M D + P+ TL S++ AC+ G L +G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 236 VHQY 239
+H Y
Sbjct: 411 LHAY 414
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 127/256 (49%), Gaps = 5/256 (1%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G+ P + F +L K +E ++ + KLGF D + NAL+S + + G + SA
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+F S +D + + LING + +A++ F +M G D+ T+ S++ A +
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
G G+ +H + + G + + AL+++Y KC + A F E +VV W+
Sbjct: 403 GTLFRGQQLHAYTTKLGFAS-NNKIEGALLNLYAKCADIETALDYFLET--EVENVVLWN 459
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
V++ Y + +++ R+F M + +VPN++T S+L C G L+ G+ +H I
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 244 KVSLNSVELGTALVDM 259
LN+ + + L+DM
Sbjct: 520 NFQLNAY-VCSVLIDM 534
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 130/262 (49%), Gaps = 8/262 (3%)
Query: 2 RQKGVE---PDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
RQ +E P+Q+T+P +LK + +E I++QI K F L+ + + LI +A
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKL 538
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + +A + + KD+++WT +I GY + + +AL F +M G D + + + +
Sbjct: 539 GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 598
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A A G+ +H +G D +AL+ +Y +CG +++ F++
Sbjct: 599 SACAGLQALKEGQQIHAQACVSG-FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAG-- 655
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
D + W+ LV+G+ Q ++A+RVF M + + N FT S + A + + + QGK VH
Sbjct: 656 DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH 715
Query: 238 QYIECKKVSLNSVELGTALVDM 259
I K + E+ AL+ M
Sbjct: 716 AVI-TKTGYDSETEVCNALISM 736
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 10/242 (4%)
Query: 1 MRQKGVEPDQHTFPLLLK--MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
+ +G+ P+ T LL+ + + +++ +++QI KLG D + L + G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL- 117
+ A +VFDE + I W +I +L E FV+M S + T VL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 118 --RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
R ++A D + +H + G ++ V + L+D+Y + G D A +VFD +
Sbjct: 195 ACRGGSVAFD--VVEQIHARILYQG-LRDSTVVCNPLIDLYSRNGFVDLARRVFDGL--R 249
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+D W +++G + +AIR+F +M ++P + +SVLSAC +L+ G+
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 236 VH 237
+H
Sbjct: 310 LH 311
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++G++ + TF +K S+ ++ ++A I K G+D + NALIS +A G
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGS 742
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A + F E S K+ ++W A+IN Y K+ SEAL F +M + + +T+V VL A
Sbjct: 743 ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 802
Query: 120 AAMAGDDNFG-KWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ G + G + + G + + YV ++DM + G A + EMP
Sbjct: 803 CSHIGLVDKGIAYFESMNSEYGLSPKPEHYV--CVVDMLTRAGLLSRAKEFIQEMPIK-P 859
Query: 178 DVVCWSVLVAGYV 190
D + W L++ V
Sbjct: 860 DALVWRTLLSACV 872
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 126/235 (53%), Gaps = 14/235 (5%)
Query: 7 EPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAG--NALISAFANSGFIGSA 63
PD+ T LLK S ++ I+ + + GF A +L+ + G++ SA
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+ FD+ K +I+W++LI GY + EA+ F +++ + +D+ + S++ A
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA-- 324
Query: 124 GDDNFGKWVHGFYVQAGRVQL----DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+F G +QA V+L + V ++++DMY KCG D+A K F EM +DV
Sbjct: 325 ---DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEM--QLKDV 379
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+ W+V++ GY + + ++R+F+ ML N+ P+E +VLSAC+HSG + +G+
Sbjct: 380 ISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGE 434
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 121/238 (50%), Gaps = 6/238 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++G+ P++ TF LK +E I+ K+GF++ GN+L+ ++ G
Sbjct: 98 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 157
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV--DALTVVSVL 117
I A +VF + +I+W A+I G+V S+AL F M+ D T+ S+L
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 118 RAAAMAGDDNFGKWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
+A + G GK +HGF V++G + +L+D+Y KCG+ A K FD++
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI--KE 275
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+ ++ WS L+ GY Q +F +A+ +F + N + F L+S++ A L QGK
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK 333
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 5/212 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + K G L+ N LI + A +VFD +++++W+AL++G+V N
Sbjct: 28 VHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGD 87
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+L F +M G + T + L+A + G +HGF ++ G ++ V +
Sbjct: 88 LKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIG-FEMMVEVGN 146
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L+DMY KCG ++A KVF + R ++ W+ ++AG+V A+ F M N+
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIV--DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 211 --VPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
P+EFTLTS+L AC+ +G + GK +H ++
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 112 TVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
+VS+LR G + G VH + +++G L+ + L+DMY KC A KVFD
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGS-GLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 172 MPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
MP R+VV WS L++G+V + ++ +F M + PNEFT ++ L AC AL+
Sbjct: 67 MPE--RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 232 QGKLVHQYIECKKVSLN-SVELGTALVDM 259
+G +H + C K+ VE+G +LVDM
Sbjct: 125 KGLQIHGF--CLKIGFEMMVEVGNSLVDM 151
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 23 PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALI 82
P ++ I KLGF + + +LI+ +AN IG + +VFDE + + WTAL+
Sbjct: 239 PAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALL 298
Query: 83 NGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRV 142
+GY N +AL F M + T S L + + G ++GK +HG V+ G +
Sbjct: 299 SGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG-L 357
Query: 143 QLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
+ D +V ++L+ MY G+ +DA VF + + +V W+ ++ G Q + + A +F
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVF--IKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 203 WNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
M+ N P+E T T +LSAC+H G L++G+ + Y+
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 21/196 (10%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD 109
+I+ + S + A +FDE V+D+++W ++I+G V+ + A+K F D
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLF----------D 121
Query: 110 ALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRV--QL---DGYVWSALMDMYFKCGHCDD 164
+ SV+ AM G + G QA R+ Q+ D W++++ Y + G DD
Sbjct: 122 EMPERSVVSWTAMVN----GCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDD 177
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A K+F +MP ++V+ W+ ++ G Q + +A+ +F NML + T V++AC
Sbjct: 178 ALKLFKQMP--GKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 225 AHSGALDQGKLVHQYI 240
A++ A G VH I
Sbjct: 236 ANAPAFHMGIQVHGLI 251
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
Query: 2 RQKGVEPDQHTFPLLLKM--FSKPVVEDPFMIYAQIFKL--GFDLDRFAGNALISAFANS 57
R V P++ T+P L K F ++A + K + DRF AL+ +AN
Sbjct: 104 RSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANC 163
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKN---DLPSEALKCFVKMRSTGTGVDALTVV 114
G + A +F+ D+ W L+ Y + D E L F++M+ + L++V
Sbjct: 164 GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLV 220
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+++++ A G+ G W H YV + L+ +V ++L+D+Y KCG A KVFDEM
Sbjct: 221 ALIKSCANLGEFVRGVWAH-VYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM-- 277
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
S RDV C++ ++ G Q+ I ++ +++S +VP+ T +SAC+HSG +D+G
Sbjct: 278 SQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
+ + K L++F G +LI ++ G + A +VFDE S +D+ + A+I G +
Sbjct: 239 HVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFG 298
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
E ++ + + S G D+ T V + A + +G + G + ++ +
Sbjct: 299 QEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGC 358
Query: 152 LMDMYFKCGHCDDACKVFDEMP 173
L+D+ + G ++A + +MP
Sbjct: 359 LVDLLGRSGRLEEAEECIKKMP 380
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 123/235 (52%), Gaps = 10/235 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV+PD+ TFP +LK V+ I+ + K GF D + NAL+ +A G
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A VFD KD ++W +++ GY+ + L EAL F M G D + + SVL
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL-- 303
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G+ +HG+ ++ G ++ + V +AL+ +Y K G AC +FD+M RD
Sbjct: 304 -ARVLSFKHGRQLHGWVIRRG-MEWELSVANALIVLYSKRGQLGQACFIFDQM--LERDT 359
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
V W+ +++ + +K + ++ F M N P+ T SVLS CA++G ++ G+
Sbjct: 360 VSWNAIISAH---SKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGE 411
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 8/193 (4%)
Query: 50 LISAFANSGFIGSACQVFDESSVKD--IIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
L+ +A+ G+ A +VFD S +D AW +LI+GY + +A+ + +M G
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVK 192
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D T VL+A G G+ +H V+ G D YV +AL+ MY KCG A
Sbjct: 193 PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG-FGYDVYVLNALVVMYAKCGDIVKARN 251
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VFD +P ++D V W+ ++ GY+ +A+ +F M+ + + P++ ++SVL+
Sbjct: 252 VFDMIP--HKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVL-- 307
Query: 228 GALDQGKLVHQYI 240
+ G+ +H ++
Sbjct: 308 -SFKHGRQLHGWV 319
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ S L+ +Y CG+ + A +VFD M W+ L++GY + +++DA+ +++ M
Sbjct: 129 ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE 188
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
D V P+ FT VL AC G++ G+ +H+
Sbjct: 189 DGVKPDRFTFPRVLKACGGIGSVQIGEAIHR 219
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 139/264 (52%), Gaps = 13/264 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ KG+ PD L+ K +V + + + F LD N+L+S +
Sbjct: 322 MQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFEL 381
Query: 60 IGSA----CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A C++ +E + + AW ++ GY K + ++ F K+++ G +D+ + S
Sbjct: 382 LSVAEKLFCRISEEGNKE---AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATS 438
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ + + G GK +H + V+ + L V ++L+D+Y K G A ++F E
Sbjct: 439 VISSCSHIGAVLLGKSLHCYVVKTS-LDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-- 495
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+V+ W+ ++A YV C + + AI +F M+S+N P+ TL ++L AC ++G+L++G++
Sbjct: 496 -TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQM 554
Query: 236 VHQYIECKKVSLNSVELGTALVDM 259
+H+YI + +N + L AL+DM
Sbjct: 555 IHRYITETEHEMN-LSLSAALIDM 577
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 114/213 (53%), Gaps = 8/213 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + K DL N+LI + G + A ++F E+ ++I W A+I YV +
Sbjct: 455 LHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHCEQ 513
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+A+ F +M S ++T+V++L A G G+ +H Y+ +++ + +
Sbjct: 514 SEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHR-YITETEHEMNLSLSA 572
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMY KCGH + + ++FD + +D VCW+V+++GY + AI +F M +V
Sbjct: 573 ALIDMYAKCGHLEKSRELFD--AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDV 630
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLV----HQY 239
P T ++LSAC H+G ++QGK + HQY
Sbjct: 631 KPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY 663
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 33 AQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPS 92
A I G + F + LIS++A+ G + +VF + +DI W ++I + N +
Sbjct: 48 ALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYA 107
Query: 93 EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSAL 152
+L F M +G D T V+ A A + G +VHG ++ G + V ++
Sbjct: 108 RSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASF 167
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML---SDN 209
+ Y KCG DAC VFDEMP RDVV W+ +++G+VQ + + + M SD
Sbjct: 168 VYFYSKCGFLQDACLVFDEMP--DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDV 225
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
PN TL AC++ GAL +G+ +H +
Sbjct: 226 DKPNPRTLECGFQACSNLGALKEGRCLHGF 255
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 8/255 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLG-FDLDRFAGNALISAFANSG 58
M G PD T P+++ ++ + ++ + K G FD + G + + ++ G
Sbjct: 116 MLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCG 175
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD---ALTVVS 115
F+ AC VFDE +D++AWTA+I+G+V+N L KM S G+ VD T+
Sbjct: 176 FLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLEC 235
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+A + G G+ +HGF V+ G +V S++ Y K G+ +A F E+
Sbjct: 236 GFQACSNLGALKEGRCLHGFAVKNGLAS-SKFVQSSMFSFYSKSGNPSEAYLSFREL--G 292
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
D+ W+ ++A + +++ +FW M + + P+ ++ +++ + QGK
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKA 352
Query: 236 VHQYIECKKVSLNSV 250
H ++ SL+S
Sbjct: 353 FHGFVIRHCFSLDST 367
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 3/202 (1%)
Query: 1 MRQKGVEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + +P T LL+ + +E MI+ I + +++ ALI +A G
Sbjct: 524 MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGH 583
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + ++FD + KD + W +I+GY + A+ F +M + T +++L A
Sbjct: 584 LEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSA 643
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AG GK + + V+ + +S L+D+ + G+ ++A MP+S D
Sbjct: 644 CTHAGLVEQGKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFS-PDG 701
Query: 180 VCWSVLVAGYVQCNKFQDAIRV 201
V W L++ + +F+ IR+
Sbjct: 702 VIWGTLLSSCMTHGEFEMGIRM 723
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 120/264 (45%), Gaps = 48/264 (18%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVE-DPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV+PD+ TFP +LK SK ++A K D D F +L+ +A +G
Sbjct: 117 MLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQ 176
Query: 60 IGSACQVFDES----SVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A QVF+ES + I+ W LINGY + A F M +G
Sbjct: 177 LKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGS------- 229
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
WS L+ Y G + A ++F+ MP
Sbjct: 230 ---------------------------------WSTLIKGYVDSGELNRAKQLFELMPE- 255
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
++VV W+ L+ G+ Q ++ AI ++ ML + PNE+T+ +VLSAC+ SGAL G
Sbjct: 256 -KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 236 VHQYIECKKVSLNSVELGTALVDM 259
+H YI + L+ +GTALVDM
Sbjct: 315 IHGYILDNGIKLDRA-IGTALVDM 337
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
+ LI + +SG + A Q+F+ K++++WT LING+ + A+ + +M G
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ T+ +VL A + +G G +HG+ + G ++LD + +AL+DMY KCG D A
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNG-IKLDRAIGTALVDMYAKCGELDCAAT 349
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF M +++D++ W+ ++ G+ +F AI+ F M+ P+E +VL+AC +S
Sbjct: 350 VFSNM--NHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNS 407
Query: 228 GALDQG 233
+D G
Sbjct: 408 SEVDLG 413
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +KG++P+++T +L SK + I+ I G LDR G AL+ +A G
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VF + KDI++WTA+I G+ + +A++CF +M +G D + ++VL A
Sbjct: 344 LDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTA 403
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSAL------MDMYFKCGHCDDACKVFDEMP 173
+ + + G F+ ++LD + L +D+ + G ++A ++ + MP
Sbjct: 404 CLNSSEVDLGL---NFF---DSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP 457
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
+ D+ W+ L ++ A V N+L
Sbjct: 458 IN-PDLTTWAALYRACKAHKGYRRAESVSQNLL 489
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 124/244 (50%), Gaps = 6/244 (2%)
Query: 16 LLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDI 75
++ M+SK F +F D + N +I + SG + +A ++FD+ +D+
Sbjct: 115 IIGMYSK---RGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDL 171
Query: 76 IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGF 135
I+WTA+ING+VK EAL F +M+ +G D + +++ L A G +FG WVH
Sbjct: 172 ISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVH-R 230
Query: 136 YVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKF 195
YV + + + V ++L+D+Y +CG + A +VF M R VV W+ ++ G+
Sbjct: 231 YVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM--EKRTVVSWNSVIVGFAANGNA 288
Query: 196 QDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTA 255
+++ F M P+ T T L+AC+H G +++G Q ++C +E
Sbjct: 289 HESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGC 348
Query: 256 LVDM 259
LVD+
Sbjct: 349 LVDL 352
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 36/228 (15%)
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA--M 122
Q ++S+ + ++WT+ IN +N +EA K F M G + +T +++L
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM--------------------------- 155
+G + G +HG+ + G + V +A++ M
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 156 ----YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
Y + G D+A K+FD+MP RD++ W+ ++ G+V+ ++A+ F M V
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMP--ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ + + L+AC + GAL G VH+Y+ + N+V + +L+D+
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFK-NNVRVSNSLIDL 250
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LI + G + A QVF + +++W ++I G+ N E+L F KM+ G
Sbjct: 245 NSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK 304
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
DA+T L A + G G R+ + L+D+Y + G +DA K
Sbjct: 305 PDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+ MP +VV S+L A N A R+ ++ NV
Sbjct: 365 LVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNV 407
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 115/210 (54%), Gaps = 7/210 (3%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+ED F +++++ + D + N ++S +A+ G + A F+++ K ++W ++I
Sbjct: 328 MEDAFALFSEMP----NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAA 383
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y KN EA+ F++M G D T+ S+L A+ + G +H V+ V
Sbjct: 384 YEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT--VIP 441
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D V +AL+ MY +CG ++ ++FDEM R+V+ W+ ++ GY +A+ +F +
Sbjct: 442 DVPVHNALITMYSRCGEIMESRRIFDEMKLK-REVITWNAMIGGYAFHGNASEALNLFGS 500
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
M S+ + P+ T SVL+ACAH+G +D+ K
Sbjct: 501 MKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 44/224 (19%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
F+ F + + N++I A+ G + SA +FD+ +D I+W +I+GYV +A
Sbjct: 273 FRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAF 332
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
F +M + D + W+ ++
Sbjct: 333 ALFSEMPNR----------------------------------------DAHSWNMMVSG 352
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEF 215
Y G+ + A F++ P + V W+ ++A Y + +++A+ +F M + P+
Sbjct: 353 YASVGNVELARHYFEKTPEKH--TVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 216 TLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
TLTS+LSA L G +HQ + K + V + AL+ M
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIV--VKTVIPDVPVHNALITM 452
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 12/175 (6%)
Query: 38 LGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKC 97
LGF A N ++ SG+I A +F++ ++ + W +I+GYVK ++A K
Sbjct: 38 LGFR----ATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKL 93
Query: 98 FVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYF 157
F M D +T +++ G F + + + D + W+ ++ Y
Sbjct: 94 FDVMPKR----DVVTWNTMISGYVSCGGIRFLEEARKLFDEMP--SRDSFSWNTMISGYA 147
Query: 158 KCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
K +A +F++MP R+ V WS ++ G+ Q + A+ +F M + P
Sbjct: 148 KNRRIGEALLLFEKMP--ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 86/221 (38%), Gaps = 63/221 (28%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D F+ N +IS +A + IG A +F++ ++ ++W+A+I G+ +N A+ F KM
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP 194
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY-------------------------- 136
+ V +++ ++ WV G Y
Sbjct: 195 VKDSSPLCALVAGLIKNERLSE----AAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQ 250
Query: 137 VQAGRVQLDGY---------------------VWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+A R D W++++ Y K G A +FD+M
Sbjct: 251 VEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM--K 308
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVF----------WNML 206
RD + W+ ++ GYV ++ +DA +F WNM+
Sbjct: 309 DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMM 349
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 49/280 (17%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + VEP++ TFP +LK +K +++ I+ K GF D F + L+ + GF
Sbjct: 119 MSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGF 178
Query: 60 IGSA-----------------------------------------CQ----VFDESSVKD 74
+ A C+ +FD+ +
Sbjct: 179 MKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRS 238
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG 134
+++W +I+GY N +A++ F +M+ + +T+VSVL A + G G+W+H
Sbjct: 239 VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH- 297
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
Y + +++D + SAL+DMY KCG + A VF+ +P +V+ WS ++ G+ +
Sbjct: 298 LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE--NVITWSAMINGFAIHGQ 355
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
DAI F M V P++ ++L+AC+H G +++G+
Sbjct: 356 AGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 54/287 (18%)
Query: 24 VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF----IGSACQVFDESSVKDIIAWT 79
+ D I+A K G D A ++ A S + A ++F++ ++ +W
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWN 94
Query: 80 ALINGYVKNDLPSE--ALKCFVKMRSTG-TGVDALTVVSVLRAAAMAGDDNFGKWVHGFY 136
+I G+ ++D A+ F +M S + T SVL+A A G GK +HG
Sbjct: 95 TIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 137 VQAG------------------------------------------RVQLDGYV--WSAL 152
++ G R + DG + W+ +
Sbjct: 155 LKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVM 214
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
+D Y + G C A +FD+M R VV W+ +++GY F+DA+ VF M ++ P
Sbjct: 215 IDGYMRLGDCKAARMLFDKM--RQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRP 272
Query: 213 NEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
N TL SVL A + G+L+ G+ +H Y E + ++ V LG+AL+DM
Sbjct: 273 NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDM 318
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
G +D G+ALI ++ G I A VF+ +++I W+A+ING+ + +A+ CF
Sbjct: 304 GIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCF 363
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR------VQLDGYV---- 148
KMR G + +++L A + HG V+ GR V +DG
Sbjct: 364 CKMRQAGVRPSDVAYINLLTACS-----------HGGLVEEGRRYFSQMVSVDGLEPRIE 412
Query: 149 -WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
+ ++D+ + G D+A + MP DV+ ++L A +Q N
Sbjct: 413 HYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 9/262 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK---PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
MR++GV P+ TFP K + PV I+A K G LD F G + + +
Sbjct: 99 MRREGVVPNDFTFPCAFKAVASLRLPVTGK--QIHALAVKCGRILDVFVGCSAFDMYCKT 156
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
A ++FDE +++ W A I+ V + P EA++ F++ R +++T + L
Sbjct: 157 RLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + N G +HG +++G D V + L+D Y KC + +F EM +
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSG-FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM--GTK 273
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ V W LVA YVQ ++ + A ++ D V ++F ++SVLSACA L+ G+ +H
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIH 333
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ K ++ +G+ALVDM
Sbjct: 334 AH-AVKACVERTIFVGSALVDM 354
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 5/205 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + GFD D N LI + I S+ +F E K+ ++W +L+ YV+N
Sbjct: 231 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 290
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+A +++ R + SVL A A G+ +H V+A V+ +V S
Sbjct: 291 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGS 349
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMY KCG +D+ + FDEMP +++V + L+ GY + A+ +F M
Sbjct: 350 ALVDMYGKCGCIEDSEQAFDEMP--EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 407
Query: 211 --VPNEFTLTSVLSACAHSGALDQG 233
PN T S+LSAC+ +GA++ G
Sbjct: 408 GPTPNYMTFVSLLSACSRAGAVENG 432
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 4/212 (1%)
Query: 30 MIYAQIFK-LGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
+++A+I K L F N LI+ ++ SA V + +++++WT+LI+G +N
Sbjct: 27 VVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQN 86
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
S AL F +MR G + T +A A GK +H V+ GR+ LD +V
Sbjct: 87 GHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI-LDVFV 145
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+ DMY K DDA K+FDE+P R++ W+ ++ V + ++AI F
Sbjct: 146 GCSAFDMYCKTRLRDDARKLFDEIP--ERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ PN T + L+AC+ L+ G +H +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLV 235
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 38/255 (14%)
Query: 6 VEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
V PD +TFP +LK S + I+ K+G F GN L+S + GF+ A
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
V DE S +D+++W +L+ GY +N +AL+ +M S DA T+ S+L A +
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
+N YV+ DM+FK G + +V W+V
Sbjct: 256 TENV------MYVK---------------DMFFKMGK---------------KSLVSWNV 279
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKK 244
++ Y++ +A+ ++ M +D P+ ++TSVL AC + AL GK +H YIE KK
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 245 VSLNSVELGTALVDM 259
+ N + L AL+DM
Sbjct: 340 LIPNLL-LENALIDM 353
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
Query: 73 KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWV 132
K +++W +I Y+KN +P EA++ + +M + G DA+++ SVL A + GK +
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
Query: 133 HGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQC 192
HG Y++ ++ + + +AL+DMY KCG + A VF+ M RDVV W+ +++ Y
Sbjct: 332 HG-YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM--KSRDVVSWTAMISAYGFS 388
Query: 193 NKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+ DA+ +F + +VP+ + L+AC+H+G L++G+
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 3/220 (1%)
Query: 8 PDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF 67
P + F L + + P + ++++I + G L+ A+A+ + SA +VF
Sbjct: 38 PQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVF 97
Query: 68 DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN 127
DE +++I +I YV N E +K F M D T VL+A + +G
Sbjct: 98 DEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIV 157
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
G+ +HG + G + +V + L+ MY KCG +A V DEM S RDVV W+ LV
Sbjct: 158 IGRKIHGSATKVG-LSSTLFVGNGLVSMYGKCGFLSEARLVLDEM--SRRDVVSWNSLVV 214
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
GY Q +F DA+ V M S + + T+ S+L A +++
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
LM Y A KVFDE+P R+V+ +V++ YV + + ++VF M NV
Sbjct: 80 LMRAYASLKDVASARKVFDEIPE--RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVR 137
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE-LGTALVDM 259
P+ +T VL AC+ SG + G+ +H KV L+S +G LV M
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHG--SATKVGLSSTLFVGNGLVSM 184
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NALI +A G + A VF+ +D+++WTA+I+ Y + +A+ F K++ +G
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLV 407
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D++ V+ L A + AG G+ ++ + ++D+ + G +A +
Sbjct: 408 PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYR 467
Query: 168 VFDEMPYSYRDVVCWSVLVAG 188
+M + V W L+
Sbjct: 468 FIQDMSMEPNERV-WGALLGA 487
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 137/261 (52%), Gaps = 5/261 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR +GV +FP LLK +K + +++ + KLG+ F NAL+S +A +
Sbjct: 173 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDD 232
Query: 60 IGSACQVFDESSVK-DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ +A ++FD K D + W ++++ Y + E L+ F +M TG ++ T+VS L
Sbjct: 233 LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALT 292
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A GK +H +++ + YV +AL+ MY +CG A ++ +M + D
Sbjct: 293 ACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA--D 350
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
VV W+ L+ GYVQ +++A+ F +M++ +E ++TS+++A L G +H
Sbjct: 351 VVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHA 410
Query: 239 YIECKKVSLNSVELGTALVDM 259
Y+ K +++++G L+DM
Sbjct: 411 YV-IKHGWDSNLQVGNTLIDM 430
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 114/214 (53%), Gaps = 9/214 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ I + G LD N L+ + +G A +VF+ KD+++WT++I+ N
Sbjct: 509 IHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGN 567
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
SEA++ F +M TG D++ ++ +L AAA N G+ +H + ++ G L+G +
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG-FCLEGSIAV 626
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
A++DMY CG A VFD + + ++ ++ ++ Y + A+ +F M +NV
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRI--ERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENV 684
Query: 211 VPNEFTLTSVLSACAHSGALDQGK-----LVHQY 239
P+ + ++L AC+H+G LD+G+ + H+Y
Sbjct: 685 SPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 7/224 (3%)
Query: 31 IYAQIFKL--GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
++++IFK F+LD AG L+ + G + A +VFDE + AW +I YV N
Sbjct: 102 LHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSN 160
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
P+ AL + MR G + + ++L+A A D G +H V+ G G++
Sbjct: 161 GEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG-YHSTGFI 219
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL+ MY K A ++FD D V W+ +++ Y K + + +F M
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQ-EKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVEL 252
PN +T+ S L+AC GK +H + K S +S EL
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASV--LKSSTHSSEL 320
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 115/229 (50%), Gaps = 5/229 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A + K G+D + GN LI ++ + F KD+I+WT +I GY +ND
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL+ F + +D + + S+LRA+++ K +H ++ G LD + +
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG--LLDTVIQN 525
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+D+Y KC + A +VF+ + +DVV W+ +++ +A+ +F M+ +
Sbjct: 526 ELVDVYGKCRNMGYATRVFESI--KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ L +LSA A AL++G+ +H Y+ K L + A+VDM
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEG-SIAVAVVDM 631
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 118/230 (51%), Gaps = 6/230 (2%)
Query: 31 IYAQIFKLG-FDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
I+A + K + + NALI+ + G + A ++ + + D++ W +LI GYV+N
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+ EAL+ F M + G D +++ S++ A+ + G +H + ++ G + V
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG-WDSNLQVG 424
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+ L+DMY KC + F M +D++ W+ ++AGY Q + +A+ +F ++
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRM--HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ +E L S+L A + ++ K +H +I +K L++V + LVD+
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHI-LRKGLLDTV-IQNELVDV 530
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
A NA+IS G I A +VFD ++ +W +I + +N EAL F+ M+
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G T++S+L A + GK VH V+ + +D YV S LM MY KCG
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC-QFDVDVYVASVLMTMYIKCGELVK 384
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSA 223
+ +FD P +D++ W+ +++GY ++A++VF M LS + PNE T + LSA
Sbjct: 385 SKLIFDRFP--SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Query: 224 CAHSGALDQGKLVHQYIE 241
C+++G +++G +++ +E
Sbjct: 443 CSYAGMVEEGLKIYESME 460
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 9/193 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK----PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M+++GV P TFP L+ + S + ++AQ+ + FD+D + + L++ +
Sbjct: 322 MQKQGVRP---TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIK 378
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG-TGVDALTVVS 115
G + + +FD KDII W ++I+GY + L EALK F +M +G T + +T V+
Sbjct: 379 CGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVA 438
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
L A + AG G ++ V+ ++ ++DM + G ++A ++ D M
Sbjct: 439 TLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVE 498
Query: 176 YRDVVCWSVLVAG 188
D W L+
Sbjct: 499 -PDAAVWGSLLGA 510
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F D + + N L+S + +G I A +VFD +++++WTAL+ GYV N
Sbjct: 69 KLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDV 128
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
A F KM + ++ L+ + D+ K + D ++++
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRI---DDACKLYEMIPDK------DNIARTSMI 179
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
K G D+A ++FDEM S R V+ W+ +V GY Q N+ DA ++F +V+P
Sbjct: 180 HGLCKEGRVDEAREIFDEM--SERSVITWTTMVTGYGQNNRVDDARKIF------DVMPE 231
Query: 214 --EFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
E + TS+L +G ++ + + + + K V
Sbjct: 232 KTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV 265
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 34/266 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALIS------- 52
M + G+ PD T+P L+K S+ ++ + K G + D F N LI
Sbjct: 99 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 158
Query: 53 ------------------------AFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
A+A SG + SA VFDE S +D++ W+++I+GYVK
Sbjct: 159 QASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKR 218
Query: 89 DLPSEALKCFVKMRSTGTG-VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
++AL+ F +M G+ + +T+VSV+ A A G N GK VH Y+ + L
Sbjct: 219 GEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR-YILDVHLPLTVI 277
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ ++L+DMY KCG DA VF D + W+ ++ G ++++++F M
Sbjct: 278 LQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRE 337
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQG 233
+ P+E T +L+AC+H G + +
Sbjct: 338 SKIDPDEITFLCLLAACSHGGLVKEA 363
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 128/263 (48%), Gaps = 34/263 (12%)
Query: 29 FMIYAQIFKLGF-DLDRFAGNAL-ISAFANSGFIGSACQVFDESSVKDIIAWTALINGYV 86
+ I+ + LG + + F L SA ++SG + A + + S W +I G+
Sbjct: 25 YKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFS 84
Query: 87 KNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG 146
+ P +++ +++M G D +T ++++++ + G +H V++G ++ D
Sbjct: 85 NSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG-LEWDL 143
Query: 147 YVWSALMDMYFKCGHCDDACKVFDEMPY-----------------------------SYR 177
++ + L+ MY A K+FDEMP+ S R
Sbjct: 144 FICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSER 203
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQGKLV 236
DVV WS ++ GYV+ ++ A+ +F M+ + NE T+ SV+ ACAH GAL++GK V
Sbjct: 204 DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTV 263
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H+YI + L +V L T+L+DM
Sbjct: 264 HRYILDVHLPL-TVILQTSLIDM 285
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 113/205 (55%), Gaps = 9/205 (4%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK-CFVKM 101
D + N ++ F G + +A VFD+ +D+++W +L+ GY K ++ F +M
Sbjct: 299 DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEM 358
Query: 102 R-STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL--DGYVWSALMDMYFK 158
D +T+VS++ AA G+ + G+WVHG + R+QL D ++ SAL+DMY K
Sbjct: 359 TIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVI---RLQLKGDAFLSSALIDMYCK 415
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
CG + A VF + +DV W+ ++ G Q A+++F M + V PN TL
Sbjct: 416 CGIIERAFMVFKTA--TEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLL 473
Query: 219 SVLSACAHSGALDQGKLVHQYIECK 243
+VL+AC+HSG +++G V +++ K
Sbjct: 474 AVLTACSHSGLVEEGLHVFNHMKDK 498
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 136/294 (46%), Gaps = 40/294 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLG-FDLDRFAGNALISAFANSGF 59
M + V PD+ TF L+K S + + I+ I G L + N+L+ + G
Sbjct: 124 MIRHRVSPDRQTFLYLMKASS--FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGN 181
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
G A +VF D+ ++ +I GY K EALK + KM S G D TV+S+L
Sbjct: 182 FGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVC 241
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS-ALMDMYFKC------------------- 159
D GK VHG+ + G V + S AL+DMYFKC
Sbjct: 242 CGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMR 301
Query: 160 ------------GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR-VFWNM- 205
G + A VFD+MP RD+V W+ L+ GY + Q +R +F+ M
Sbjct: 302 SWNTMVVGFVRLGDMEAAQAVFDQMP--KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMT 359
Query: 206 LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ + V P+ T+ S++S A++G L G+ VH + ++ ++ L +AL+DM
Sbjct: 360 IVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAF-LSSALIDM 412
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + +L D F +ALI + G I A VF ++ KD+ WT++I G +
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-- 148
+AL+ F +M+ G + +T+++VL A + +G G +H F + D
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG--LHVFNHMKDKFGFDPETEH 507
Query: 149 WSALMDMYFKCGHCDDACKVFD-EMPYSYRDVVCWSVLVA 187
+ +L+D+ + G ++A + +MP + S+L A
Sbjct: 508 YGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 134/273 (49%), Gaps = 30/273 (10%)
Query: 14 PLLLKMFS--KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESS 71
PL+L+ + P V +++++ K G D G++LIS + G + SA +VFDE
Sbjct: 49 PLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMP 108
Query: 72 VKDIIAWTALINGYVKND---LPSEALKCFVKMRSTGTGVDALT----VVSVLRAAAMAG 124
+++ W A+I GY+ N L S + R+T T ++ + + + +A +
Sbjct: 109 ERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFE 168
Query: 125 D-----DNFGKW--VHGFYVQAGRVQ-----------LDGYVWSALMDMYFKCGHCDDAC 166
N W + G YV +++ + +VWS +M YF+ G +A
Sbjct: 169 RMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEAR 228
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
+F + RD+V W+ L+AGY Q DAI F+NM + P+ T++S+LSACA
Sbjct: 229 AIFYRV--FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQ 286
Query: 227 SGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
SG LD G+ VH I + + LN + AL+DM
Sbjct: 287 SGRLDVGREVHSLINHRGIELNQF-VSNALIDM 318
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 3/211 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
+ F + ++S + G + A +F +D++ W LI GY +N +A+ F M+
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G DA+TV S+L A A +G + G+ VH G ++L+ +V +AL+DMY KCG
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG-IELNQFVSNALIDMYAKCGDL 325
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
++A VF+ + S R V C + +++ K ++A+ +F M S ++ P+E T +VL+
Sbjct: 326 ENATSVFESI--SVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLT 383
Query: 223 ACAHSGALDQGKLVHQYIECKKVSLNSVELG 253
AC H G L +G + ++ + V N G
Sbjct: 384 ACVHGGFLMEGLKIFSEMKTQDVKPNVKHFG 414
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 42/252 (16%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ +G EPD T +L ++ D +++ I G +L++F NALI +A G
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +A VF+ SV+ + ++I+ + EAL+ F M S D +T ++VL A
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YR 177
VHG ++ G K+F EM
Sbjct: 385 C-----------VHGGFLMEG-------------------------LKIFSEMKTQDVKP 408
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+V + L+ + K ++A R+ M +V PN+ L ++L AC + + V
Sbjct: 409 NVKHFGCLIHLLGRSGKLKEAYRLVKEM---HVKPNDTVLGALLGACKVHMDTEMAEQVM 465
Query: 238 QYIECKKVSLNS 249
+ IE NS
Sbjct: 466 KIIETAGSITNS 477
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 81 LINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
LI ++ P +AL + +R G + + A + GK +H ++ G
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFG 76
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYV 190
V D V S+L+ MY KCG A KVFDEMP R+V W+ ++ GY+
Sbjct: 77 -VCSDVMVGSSLISMYGKCGCVVSARKVFDEMP--ERNVATWNAMIGGYM 123
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 117/224 (52%), Gaps = 8/224 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ QI + G D L+ A++ +G + SA ++FDE V+D+ +W ALI G V +
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWV-HGFYVQAGRVQLDGYVW 149
SEA++ + +M + G +TVV+ L A + GD G+ + HG+ + V
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND------NVIVS 244
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+A +DMY KCG D A +VF++ + VV W+ ++ G+ + A+ +F + +
Sbjct: 245 NAAIDMYSKCGFVDKAYQVFEQFT-GKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG 303
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELG 253
+ P++ + + L+AC H+G ++ G V + CK V N G
Sbjct: 304 IKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYG 347
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 5/239 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVE-DPFMIYAQIFKLGFDLDR-FAGNALISAFANSG 58
M V PD++T + K FS +E + + LG ++ F G+AL+ + G
Sbjct: 156 MITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFG 215
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
A V D KD++ TALI GY + +EA+K F M + T SVL
Sbjct: 216 KTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLI 275
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ D GK +HG V++G + ++L+ MY +C DD+ +VF + Y +
Sbjct: 276 SCGNLKDIGNGKLIHGLMVKSG-FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYP--N 332
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
V W+ L++G VQ + + A+ F M+ D++ PN FTL+S L C++ ++G+ +H
Sbjct: 333 QVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIH 391
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 4/228 (1%)
Query: 11 HTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE 69
H F LL+ + + I A + K GF + +G+ L+ A G I A QVFD
Sbjct: 66 HNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFDG 124
Query: 70 SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG 129
S + I+ W +LI +K+ EA++ + M + D T+ SV +A + +
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGY 189
+ HG V G + +V SAL+DMY K G +A V D + +DVV + L+ GY
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVE--EKDVVLITALIVGY 242
Query: 190 VQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
Q + +A++ F +ML + V PNE+T SVL +C + + GKL+H
Sbjct: 243 SQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Query: 6 VEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
V+P+++T+ +L+ + + + +I+ + K GF+ + +L++ + + +
Sbjct: 263 VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL 322
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
+VF + ++WT+LI+G V+N AL F KM ++ T+ S LR +
Sbjct: 323 RVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLA 382
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
G+ +HG + G D Y S L+D+Y KCG D A VFD + S DV+ +
Sbjct: 383 MFEEGRQIHGIVTKYG-FDRDKYAGSGLIDLYGKCGCSDMARLVFDTL--SEVDVISLNT 439
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++ Y Q ++A+ +F M++ + PN+ T+ SVL AC +S +++G
Sbjct: 440 MIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEG 488
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
S L+D KCG D A +VFD M S R +V W+ L+A ++ + ++A+ ++ M+++N
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGM--SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNN 160
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V+P+E+TL+SV A + + + H + +++V +G+ALVDM
Sbjct: 161 VLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDM 210
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 4/207 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + ++P+ T L+ S + E+ I+ + K GFD D++AG+ LI + G
Sbjct: 359 MMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGC 418
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A VFD S D+I+ +I Y +N EAL F +M + G + +TV+SVL A
Sbjct: 419 SDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLA 478
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G + + + ++ L ++ ++D+ + G ++A + E+ D+
Sbjct: 479 CNNSRLVEEGCELFDSF-RKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINP--DL 535
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNML 206
V W L++ K + A R+ +L
Sbjct: 536 VLWRTLLSACKVHRKVEMAERITRKIL 562
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 7/262 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKM--FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M+ GV PD T +L+ F +Y QI K GFD + +ALI+ F
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGS-CVYGQIIKHGFDSECHVAHALINMFTKCD 551
Query: 59 FIGSACQVFDESSV-KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ +A +FD+ K ++W ++NGY+ + EA+ F +M+ +A+T V+++
Sbjct: 552 ALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIV 611
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
RAAA G VH +Q G V ++L+DMY KCG + + K F E+ Y
Sbjct: 612 RAAAELSALRVGMSVHSSLIQCGFCS-QTPVGNSLVDMYAKCGMIESSEKCFIEISNKY- 669
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+V W+ +++ Y A+ +F +M + + P+ + SVLSAC H+G +++GK +
Sbjct: 670 -IVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIF 728
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ + + VE +VD+
Sbjct: 729 EEMGERHKIEAEVEHYACMVDL 750
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 128/260 (49%), Gaps = 7/260 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR V+ D + L+ SK D ++ + K GF +G LI + N
Sbjct: 192 MRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCAD 249
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +A VF+E KD +W ++ Y N E L+ F MR+ ++ + S L+A
Sbjct: 250 LYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQA 309
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AA GD G +H + VQ G + D V ++LM MY KCG + A ++F + RDV
Sbjct: 310 AAYVGDLVKGIAIHDYAVQQGLIG-DVSVATSLMSMYSKCGELEIAEQLF--INIEDRDV 366
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V WS ++A Y Q + +AI +F +M+ ++ PN TLTSVL CA A GK +H Y
Sbjct: 367 VSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCY 426
Query: 240 IECKKVSLNSVELGTALVDM 259
+ + +E TA++ M
Sbjct: 427 AIKADIE-SELETATAVISM 445
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 134/260 (51%), Gaps = 9/260 (3%)
Query: 2 RQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
+KG++PD+++F LK + + + I+ I ++G + D + G AL+ + + +
Sbjct: 92 EEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDL 151
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
SA QVFD+ VKD++ W +++G +N S AL F MRS +D +++ +++ A
Sbjct: 152 VSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAV 211
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA-LMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + + +HG ++ G + + +S+ L+DMY C A VF+E+ +D
Sbjct: 212 SKLEKSDVCRCLHGLVIKKGFI----FAFSSGLIDMYCNCADLYAAESVFEEVW--RKDE 265
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
W ++A Y F++ + +F M + +V N+ S L A A+ G L +G +H Y
Sbjct: 266 SSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDY 325
Query: 240 IECKKVSLNSVELGTALVDM 259
++ + V + T+L+ M
Sbjct: 326 -AVQQGLIGDVSVATSLMSM 344
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 5/230 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ K + + A+IS +A G A + F+ +KD +A+ AL GY +
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD 482
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++A + M+ G D+ T+V +L+ A D G V+G ++ G + +V
Sbjct: 483 ANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHG-FDSECHVAH 541
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL++M+ KC A +FD+ + + V W++++ GY+ + ++A+ F M +
Sbjct: 542 ALINMFTKCDALAAAIVLFDKCGFE-KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKF 600
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVH-QYIECKKVSLNSVELGTALVDM 259
PN T +++ A A AL G VH I+C S V G +LVDM
Sbjct: 601 QPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPV--GNSLVDM 648
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAG 124
+FD ++ W ++I GY + L EAL F M G D + L+A A +
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
D G +H + G ++ D Y+ +AL++MY K A +VFD+M +DVV W+
Sbjct: 115 DFKKGLRIHDLIAEMG-LESDVYIGTALVEMYCKARDLVSARQVFDKM--HVKDVVTWNT 171
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+V+G Q A+ +F +M S V + +L +++ A + D + +H
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLH 224
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + +P+ TF +++ ++ + +++ + + GF GN+L+ +A G
Sbjct: 595 MKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGM 654
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I S+ + F E S K I++W +++ Y + L S A+ F+ M+ D+++ +SVL A
Sbjct: 655 IESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSA 714
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
AG GK + + +++ + ++ ++D+ K G +A ++ M
Sbjct: 715 CRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVG 774
Query: 180 VCWSVLVAGYVQCN 193
V ++L + + CN
Sbjct: 775 VWGALLNSSRMHCN 788
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 143/256 (55%), Gaps = 13/256 (5%)
Query: 8 PDQHTFPLLLKMFSK--PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
P++ TFP LLK +K VV+ +++AQ+ K GF +D F AL+S + + A +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGR-ILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
V DE + I + A ++G ++N +A + F R +G+G++++TV SVL GD
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGG---CGD 144
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
G +H +++G +++ YV ++L+ MY +CG A ++F+++P ++ VV ++
Sbjct: 145 IEGGMQLHCLAMKSG-FEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP--HKSVVTYNAF 201
Query: 186 VAGYVQCNKFQDAIRVFWNMLS--DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
++G ++ N + + +N++ + PN+ T + ++ACA L G+ +H + K
Sbjct: 202 ISGLME-NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKK 260
Query: 244 KVSLNSVELGTALVDM 259
+ ++ +GTAL+DM
Sbjct: 261 EFQFETM-VGTALIDM 275
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE-SSVKDIIAWTALINGYVKND 89
++ + K F + G ALI ++ SA VF E +++I+W ++I+G + N
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING 312
Query: 90 LPSEALKCFVKMRSTGTGVDALT-----------------------------------VV 114
A++ F K+ S G D+ T +
Sbjct: 313 QHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLT 372
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
S+L A + GK +HG ++A + D +V ++L+DMY KCG A ++FD
Sbjct: 373 SLLSACSDIWTLKNGKEIHGHVIKAA-AERDIFVLTSLIDMYMKCGLSSWARRIFDRFEP 431
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+D V W+V+++GY + + + AI +F + + V P+ T T+VLSAC+H G +++G
Sbjct: 432 KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGS 491
Query: 235 LVHQYIE 241
+ + ++
Sbjct: 492 QIFRLMQ 498
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 37/270 (13%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E ++ K GF+++ + G +L+S ++ G A ++F++ K ++ + A I+G
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 85 YVKNDLPSEALKCFVKMRS-TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
++N + + F MR + + +T V+ + A A + +G+ +HG V Q
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGL-VMKKEFQ 263
Query: 144 LDGYVWSALMDMYFKC--------------------------------GHCDDACKVFDE 171
+ V +AL+DMY KC G + A ++F++
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 172 MPYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
+ D W+ L++G+ Q K +A + F MLS +VP+ LTS+LSAC+
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWT 383
Query: 230 LDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L GK +H ++ K + + + T+L+DM
Sbjct: 384 LKNGKEIHGHV-IKAAAERDIFVLTSLIDM 412
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 125/239 (52%), Gaps = 7/239 (2%)
Query: 3 QKGVEPDQHTFPLLLKMFSKPVVEDPF-MIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
+ V D TF LL + P+ + ++A++ KLG + NA+IS++A+ G +
Sbjct: 196 KAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 62 SACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
A +VFD KD+I+W ++I G+ K++L A + F++M+ D T +L A
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMY--FKCGHCDDACKVFDEMPYSYRD 178
+ FGK +HG ++ G Q+ +AL+ MY F G +DA +F+ + +D
Sbjct: 316 SGEEHQIFGKSLHGMVIKKGLEQVTSAT-NALISMYIQFPTGTMEDALSLFESLK--SKD 372
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
++ W+ ++ G+ Q +DA++ F + S + +++ +++L +C+ L G+ +H
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH 431
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 125/243 (51%), Gaps = 19/243 (7%)
Query: 1 MRQKGVEPDQHTFPLLL--------KMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALIS 52
M++ VE D +T+ LL ++F K ++ + K G + A NALIS
Sbjct: 296 MQRHWVETDIYTYTGLLSACSGEEHQIFGKS-------LHGMVIKKGLEQVTSATNALIS 348
Query: 53 AFAN--SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDA 110
+ +G + A +F+ KD+I+W ++I G+ + L +A+K F +RS+ VD
Sbjct: 349 MYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDD 408
Query: 111 LTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFD 170
++LR+ + G+ +H ++G V + +V S+L+ MY KCG + A K F
Sbjct: 409 YAFSALLRSCSDLATLQLGQQIHALATKSGFVS-NEFVISSLIVMYSKCGIIESARKCFQ 467
Query: 171 EMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
++ S V W+ ++ GY Q Q ++ +F M + NV + T T++L+AC+H+G +
Sbjct: 468 QIS-SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLI 526
Query: 231 DQG 233
+G
Sbjct: 527 QEG 529
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
K G D + N ++ ++ GF+G A +FDE +D ++W +I+GY +A
Sbjct: 27 IKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAW 86
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
F M+ +G+ VD + +L+ A + G+ VHG ++ G + + YV S+L+DM
Sbjct: 87 CLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGG-YECNVYVGSSLVDM 145
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
Y KC +DA + F E+ S + V W+ L+AG+VQ + A FW
Sbjct: 146 YAKCERVEDAFEAFKEI--SEPNSVSWNALIAGFVQVRDIKTA---FW 188
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 132 VHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQ 191
H + ++ G + D YV + ++D Y K G A +FDEMP RD V W+ +++GY
Sbjct: 22 THCYAIKCGSIS-DIYVSNRILDSYIKFGFLGYANMLFDEMPK--RDSVSWNTMISGYTS 78
Query: 192 CNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI-----ECKKVS 246
C K +DA +F M + ++ + +L A D G+ VH + EC
Sbjct: 79 CGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC---- 134
Query: 247 LNSVELGTALVDM 259
+V +G++LVDM
Sbjct: 135 --NVYVGSSLVDM 145
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
I+ +IF GF D L+ ++ AC+VFDE +D ++W L + Y++N
Sbjct: 133 LQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRN 192
Query: 89 DLPSEALKCFVKMRSTGTGV---DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLD 145
+ L F KM++ G D +T + L+A A G +FGK VH F + G L
Sbjct: 193 KRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG---LS 249
Query: 146 G--YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
G + + L+ MY +CG D A +VF M R+VV W+ L++G ++AI F
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGM--RERNVVSWTALISGLAMNGFGKEAIEAFN 307
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
ML + P E TLT +LSAC+HSG + +G +
Sbjct: 308 EMLKFGISPEEQTLTGLLSACSHSGLVAEGMM 339
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT-GVDALTVVSVLR 118
I +C+VF + + +I + + P E + F +R + + L+ L+
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+GD G +HG G + D + + LMD+Y C + DACKVFDE+P RD
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGFLS-DSLLMTTLMDLYSTCENSTDACKVFDEIPK--RD 178
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSD---NVVPNEFTLTSVLSACAHSGALDQGKL 235
V W+VL + Y++ + +D + +F M +D V P+ T L ACA+ GALD GK
Sbjct: 179 TVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQ 238
Query: 236 VHQYIECKKVSLNSVELGTALVDM 259
VH +I+ +S ++ L LV M
Sbjct: 239 VHDFIDENGLS-GALNLSNTLVSM 261
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + N ++ +AN G + + +VFD+ +++ +W LI GY +N SE L F +M
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 103 STGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
G+ V + T+ VL A A G +FGKWVH + G ++D V +AL+DMY KCG
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
+ A +VF + RD++ W+ ++ G +A+ +F M + + P++ T VL
Sbjct: 240 IEIAMEVFKGI--KRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Query: 222 SACAHSGALDQG 233
AC H G ++ G
Sbjct: 298 CACKHMGLVEDG 309
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G I SA +VF E K+++ WT++INGY+ N A + F VL
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDI---------VL 92
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
++G G + + D W+ +++ Y G + +VFD+MP R
Sbjct: 93 WNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPE--R 150
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLV 236
+V W+ L+ GY Q + + + F M+ + +VVPN+ T+T VLSACA GA D GK V
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWV 210
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H+Y E + V + AL+DM
Sbjct: 211 HKYGETLGYNKVDVNVKNALIDM 233
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 38 LGFD-LDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
LG++ +D NALI + G I A +VF +D+I+W +ING + +EAL
Sbjct: 217 LGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALN 276
Query: 97 CFVKMRSTGTGVDALTVVSVLRAAAMAG--DDNFGKWVHGF--YVQAGRVQLDGYVWSAL 152
F +M+++G D +T V VL A G +D + F + ++ G V
Sbjct: 277 LFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCV---- 332
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
+D+ + G A + ++MP D V W+ L+
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVK-ADAVIWATLLG 366
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 5/235 (2%)
Query: 1 MRQKGVEPDQHTFPLLLK--MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
MR +GV + T +L + ++E ++A I GF+ D N+LI+ +A G
Sbjct: 437 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ S+ +F+ ++II W A++ + E LK KMRS G +D + L
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
AAA G+ +HG V+ G + D ++++A DMY KCG + K+ P R
Sbjct: 557 AAAKLAVLEEGQQLHGLAVKLG-FEHDSFIFNAAADMYSKCGEIGEVVKMLP--PSVNRS 613
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ W++L++ + F++ F ML + P T S+L+AC+H G +D+G
Sbjct: 614 LPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 668
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 116/219 (52%), Gaps = 4/219 (1%)
Query: 20 FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWT 79
F+ E +++ + G ++ GNAL+S + G + + +V + +D++AW
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 415
Query: 80 ALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD-DNFGKWVHGFYVQ 138
ALI GY +++ P +AL F MR G + +TVVSVL A + GD GK +H + V
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Query: 139 AGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDA 198
AG + D +V ++L+ MY KCG + +F+ + R+++ W+ ++A ++
Sbjct: 476 AG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGL--DNRNIITWNAMLAANAHHGHGEEV 532
Query: 199 IRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+++ M S V ++F+ + LSA A L++G+ +H
Sbjct: 533 LKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 571
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 13/264 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANS 57
MR +GV ++++ L++ S +++D + I Q+ K G + N+LIS +
Sbjct: 134 MRGEGVGCNENSMSLVIS--SCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSM 191
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + A +FD+ S +D I+W ++ Y +N E+ + F MR V++ TV ++L
Sbjct: 192 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 251
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGHCDDACKVFDEMPYS 175
+G+ +HG V+ G D V + L+ MY G +A VF +MP
Sbjct: 252 SVLGHVDHQKWGRGIHGLVVKMG---FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-- 306
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+D++ W+ L+A +V + DA+ + +M+S N T TS L+AC ++G++
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 236 VHQYIECKKVSLNSVELGTALVDM 259
+H + + N + +G ALV M
Sbjct: 367 LHGLVVVSGLFYNQI-IGNALVSM 389
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 115/238 (48%), Gaps = 5/238 (2%)
Query: 5 GVEPDQHTFPLLLKM--FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
G++P L+ S + + ++ + K G D + A++ + G +
Sbjct: 36 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 95
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
+ +VF+E +++++WT+L+ GY P E + + MR G G + ++ V+ + +
Sbjct: 96 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL 155
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
D++ G+ + G V++G ++ V ++L+ M G+ D A +FD+M S RD + W
Sbjct: 156 LKDESLGRQIIGQVVKSG-LESKLAVENSLISMLGSMGNVDYANYIFDQM--SERDTISW 212
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ + A Y Q +++ R+F M + N T++++LS H G+ +H +
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 270
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 5/235 (2%)
Query: 1 MRQKGVEPDQHTFPLLLK--MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
MR +GV + T +L + ++E ++A I GF+ D N+LI+ +A G
Sbjct: 454 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ S+ +F+ ++II W A++ + E LK KMRS G +D + L
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
AAA G+ +HG V+ G + D ++++A DMY KCG + K+ P R
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLG-FEHDSFIFNAAADMYSKCGEIGEVVKMLP--PSVNRS 630
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ W++L++ + F++ F ML + P T S+L+AC+H G +D+G
Sbjct: 631 LPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 685
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 116/219 (52%), Gaps = 4/219 (1%)
Query: 20 FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWT 79
F+ E +++ + G ++ GNAL+S + G + + +V + +D++AW
Sbjct: 373 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 432
Query: 80 ALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD-DNFGKWVHGFYVQ 138
ALI GY +++ P +AL F MR G + +TVVSVL A + GD GK +H + V
Sbjct: 433 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 492
Query: 139 AGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDA 198
AG + D +V ++L+ MY KCG + +F+ + R+++ W+ ++A ++
Sbjct: 493 AG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGL--DNRNIITWNAMLAANAHHGHGEEV 549
Query: 199 IRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+++ M S V ++F+ + LSA A L++G+ +H
Sbjct: 550 LKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 588
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 13/264 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANS 57
MR +GV ++++ L++ S +++D + I Q+ K G + N+LIS +
Sbjct: 151 MRGEGVGCNENSMSLVIS--SCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSM 208
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + A +FD+ S +D I+W ++ Y +N E+ + F MR V++ TV ++L
Sbjct: 209 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 268
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGHCDDACKVFDEMPYS 175
+G+ +HG V+ G D V + L+ MY G +A VF +MP
Sbjct: 269 SVLGHVDHQKWGRGIHGLVVKMG---FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-- 323
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+D++ W+ L+A +V + DA+ + +M+S N T TS L+AC ++G++
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383
Query: 236 VHQYIECKKVSLNSVELGTALVDM 259
+H + + N + +G ALV M
Sbjct: 384 LHGLVVVSGLFYNQI-IGNALVSM 406
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 115/238 (48%), Gaps = 5/238 (2%)
Query: 5 GVEPDQHTFPLLLKM--FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
G++P L+ S + + ++ + K G D + A++ + G +
Sbjct: 53 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 112
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
+ +VF+E +++++WT+L+ GY P E + + MR G G + ++ V+ + +
Sbjct: 113 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL 172
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
D++ G+ + G V++G ++ V ++L+ M G+ D A +FD+M S RD + W
Sbjct: 173 LKDESLGRQIIGQVVKSG-LESKLAVENSLISMLGSMGNVDYANYIFDQM--SERDTISW 229
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
+ + A Y Q +++ R+F M + N T++++LS H G+ +H +
Sbjct: 230 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 287
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 7/184 (3%)
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + A +FD V++ ++W +++G V+ L E ++ F KM G + + S++
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 118 RAAAMAGDD-NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
A +G G VHGF ++G + D YV +A++ +Y G + KVF+EMP
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLS-DVYVSTAILHLYGVYGLVSCSRKVFEEMP--D 122
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
R+VV W+ L+ GY + ++ I ++ M + V NE +++ V+S+C G L L
Sbjct: 123 RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLG 179
Query: 237 HQYI 240
Q I
Sbjct: 180 RQII 183
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNE 214
MY K G A +FD MP R+ V W+ +++G V+ + + + F M + P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPV--RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58
Query: 215 FTLTSVLSACAHSGAL-DQGKLVHQYIECKKVSLNSVELGTALVDM 259
F + S+++AC SG++ +G VH ++ K L+ V + TA++ +
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFV-AKSGLLSDVYVSTAILHL 103
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 5/235 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR G PD + LL +KP+ + I++ I K GF D N+L++ +
Sbjct: 362 MRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSD 421
Query: 60 IGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ +F++ + D ++W ++ ++++ P E L+ F M + D +T+ ++LR
Sbjct: 422 LYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLR 481
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
G VH + ++ G + + ++ + L+DMY KCG A ++FD M RD
Sbjct: 482 GCVEISSLKLGSQVHCYSLKTG-LAPEQFIKNGLIDMYAKCGSLGQARRIFDSM--DNRD 538
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
VV WS L+ GY Q ++A+ +F M S + PN T VL+AC+H G +++G
Sbjct: 539 VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 118/242 (48%), Gaps = 5/242 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q+ + PDQ F ++K S V ++AQ+ KL A NALI+ +
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT-GVDALTVVSVLR 118
+ A +VF +KD+I+W+++I G+ + EAL +M S G + S L+
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A + ++G +HG +++ + + +L DMY +CG + A +VFD++ D
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKS-ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP--D 335
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
W+V++AG +A+ VF M S +P+ +L S+L A AL QG +H
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 239 YI 240
YI
Sbjct: 396 YI 397
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 9/232 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ I D N ++S + G + A +VFD ++++++T++I GY +N
Sbjct: 89 IHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQ 148
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-- 148
+EA++ ++KM D S+++A A + D GK +H Q +++ ++
Sbjct: 149 GAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHA---QVIKLESSSHLIA 205
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL+ MY + DA +VF +P +D++ WS ++AG+ Q +A+ MLS
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSF 263
Query: 209 NVV-PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V PNE+ S L AC+ D G +H +++ N++ G +L DM
Sbjct: 264 GVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA-GCSLCDM 314
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 3/234 (1%)
Query: 7 EPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
P+++ F LK S + D I+ K + AG +L +A GF+ SA +
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARR 326
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
VFD+ D +W +I G N EA+ F +MRS+G DA+++ S+L A
Sbjct: 327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMA 386
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
+ G +H + ++ G + D V ++L+ MY C +F++ + D V W+ +
Sbjct: 387 LSQGMQIHSYIIKWGFLA-DLTVCNSLLTMYTFCSDLYCCFNLFEDF-RNNADSVSWNTI 444
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+ +Q + + +R+F ML P+ T+ ++L C +L G VH Y
Sbjct: 445 LTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Query: 7 EPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
EPD T LL+ ++ ++ K G ++F N LI +A G +G A +
Sbjct: 470 EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARR 529
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
+FD +D+++W+ LI GY ++ EAL F +M+S G + +T V VL A + G
Sbjct: 530 IFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGL 589
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
G ++ + S ++D+ + G ++A + DEM DVV W L
Sbjct: 590 VEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE-PDVVVWKTL 648
Query: 186 VAG 188
++
Sbjct: 649 LSA 651
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 106/186 (56%), Gaps = 4/186 (2%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN-DLPSEALKCFVKMRSTGTG 107
++IS + N GF+ A ++F+ + VKDI+ + A++ G+ ++ + ++ ++ M+ G
Sbjct: 211 SMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFH 270
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ T SV+ A ++ G+ VH +++G V + S+L+DMY KCG +DA +
Sbjct: 271 PNISTFASVIGACSVLTSHEVGQQVHAQIMKSG-VYTHIKMGSSLLDMYAKCGGINDARR 329
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VFD+M ++V W+ ++ GY + ++A+ +F M + PN T LSAC+HS
Sbjct: 330 VFDQM--QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHS 387
Query: 228 GALDQG 233
G +D+G
Sbjct: 388 GLVDKG 393
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 125/291 (42%), Gaps = 41/291 (14%)
Query: 6 VEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+ P ++ L + + P + I+A I K GF D L+ G + A Q
Sbjct: 31 LSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQ 90
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
VFDE + A+ +I+GY+K+ L E L +M +G D T+ VL+A+ G
Sbjct: 91 VFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGS 150
Query: 126 D-----NFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
+ + VH ++ V+LD + +AL+D Y K G + A VF+ M +VV
Sbjct: 151 TMILPRSLCRLVHARIIKCD-VELDDVLITALVDTYVKSGKLESARTVFETM--KDENVV 207
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV----------------------------- 211
C + +++GY+ +DA +F ++V
Sbjct: 208 CCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRA 267
Query: 212 ---PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PN T SV+ AC+ + + G+ VH I K +++G++L+DM
Sbjct: 268 GFHPNISTFASVIGACSVLTSHEVGQQVHAQI-MKSGVYTHIKMGSSLLDM 317
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G P+ TF ++ S + ++AQI K G G++L+ +A G
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A +VFD+ K++ +WT++I+GY KN P EAL+ F +M+ + +T + L A
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ +G + G + + ++ ++ ++D+ + G + A + MP D
Sbjct: 384 CSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMP-ERPDS 442
Query: 180 VCWSVLVAGYVQCN 193
W+ L++ CN
Sbjct: 443 DIWAALLSS---CN 453
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 123/234 (52%), Gaps = 10/234 (4%)
Query: 5 GVEPDQHTFPLLLKMFSKPVV----EDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
G P++ TF L M S V E+ I+ + K G + NA I+ + +G +
Sbjct: 129 GFRPNEVTF---LSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDL 185
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
S+C++F++ S+K++++W +I +++N L + L F R G D T ++VLR+
Sbjct: 186 TSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSC 245
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
G + +HG + G + + +AL+D+Y K G +D+ VF E+ + D +
Sbjct: 246 EDMGVVRLAQGIHGL-IMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEI--TSPDSM 302
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
W+ ++A Y +DAI+ F M+ + P+ T T +L+AC+HSG +++GK
Sbjct: 303 AWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGK 356
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 111/219 (50%), Gaps = 10/219 (4%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F G+ L+ + G A ++FDE +D+++W +LI+GY + + +M +
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 105 GTGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
G + +T +S++ A G G+ +HG ++ G ++ + V +A ++ Y K G
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLE-EVKVVNAFINWYGKTGDL 185
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV--VPNEFTLTSV 220
+CK+F+++ S +++V W+ ++ ++Q N + ++NM S V P++ T +V
Sbjct: 186 TSSCKLFEDL--SIKNLVSWNTMIVIHLQ-NGLAEKGLAYFNM-SRRVGHEPDQATFLAV 241
Query: 221 LSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L +C G + + +H I S N + TAL+D+
Sbjct: 242 LRSCEDMGVVRLAQGIHGLIMFGGFSGNKC-ITTALLDL 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
G++ L+ Y + GH A K+FDEMP RD+V W+ L++GY V M
Sbjct: 66 GFIGDQLVGCYLRLGHDVCAEKLFDEMP--ERDLVSWNSLISGYSGRGYLGKCFEVLSRM 123
Query: 206 LSDNV--VPNEFTLTSVLSACAHSGALDQGKLVH 237
+ V PNE T S++SAC + G+ ++G+ +H
Sbjct: 124 MISEVGFRPNEVTFLSMISACVYGGSKEEGRCIH 157
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 117/220 (53%), Gaps = 14/220 (6%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
VE ++A KL + R GNALIS + GF A VF S ++++TALI+G
Sbjct: 96 VEVTKAVHASFLKLREEKTRL-GNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISG 154
Query: 85 YVKNDLPSEALKCFVKMRSTG-TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
+ + +L EALK F +MR G + T V++L A + G +HG V++G +
Sbjct: 155 FSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLN 214
Query: 144 LDGYVWSALMDMYFK--CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
+V ++LM +Y K CDD K+FDE+P RDV W+ +V+ V+ K A +
Sbjct: 215 -SVFVSNSLMSLYDKDSGSSCDDVLKLFDEIP--QRDVASWNTVVSSLVKEGKSHKAFDL 271
Query: 202 FWNMLSDNVVP----NEFTLTSVLSACAHSGALDQGKLVH 237
F+ M N V + FTL+++LS+C S L +G+ +H
Sbjct: 272 FYEM---NRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELH 308
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
++++ D +I+A+ + G + SA ++F + K+ I + AL+ G+ +N +A
Sbjct: 342 LYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKA 401
Query: 95 LKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMD 154
LK F M G + ++ S + A + + + +HGF ++ G + + +AL+D
Sbjct: 402 LKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFG-TAFNPCIQTALLD 460
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN-VVPN 213
M +C DA ++FD+ P + + ++ GY + A+ +F L + + +
Sbjct: 461 MCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLD 520
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
E +LT +L+ C G + G +H Y K + + LG +L+ M
Sbjct: 521 EVSLTLILAVCGTLGFREMGYQIHCY-ALKAGYFSDISLGNSLISM 565
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE--SSVKDIIAWTALINGYVKN 88
I+ K G + AL+ + A ++FD+ S++ A T++I GY +N
Sbjct: 439 IHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARN 498
Query: 89 DLPSEALKCFVK-MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
LP +A+ F + + +D +++ +L G G +H + ++AG D
Sbjct: 499 GLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFS-DIS 557
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ ++L+ MY KC DDA K+F+ M DV+ W+ L++ Y+ +A+ ++ M
Sbjct: 558 LGNSLISMYAKCCDSDDAIKIFNTM--REHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Query: 208 DNVVPNEFTLTSVLSA 223
+ P+ TLT V+SA
Sbjct: 616 KEIKPDIITLTLVISA 631
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+LR +A D K VH +++ + + +AL+ Y K G +A VF + S
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLREEK--TRLGNALISTYLKLGFPREAILVF--VSLS 141
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTLTSVLSACAHSGALDQGK 234
VV ++ L++G+ + N +A++VF+ M +V PNE+T ++L+AC G
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 235 LVHQYIECKKVSLNSVELGTALVDM 259
+H I K LNSV + +L+ +
Sbjct: 202 QIHGLI-VKSGFLNSVFVSNSLMSL 225
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 120/216 (55%), Gaps = 10/216 (4%)
Query: 27 DPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVK-DIIAWTALINGY 85
D I+A + KLGF+ +L+ +++ G + A QVFDE+ K +I+ WTA+I+ Y
Sbjct: 83 DGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 86 VKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG-RVQL 144
+N+ EA++ F +M + +D + V L A A G G+ ++ ++ R+ +
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D + ++L++MY K G + A K+FDE +DV ++ ++ GY + Q+++ +F
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDE--SMRKDVTTYTSMIFGYALNGQAQESLELFKK 260
Query: 205 MLS-----DNVV-PNEFTLTSVLSACAHSGALDQGK 234
M + D V+ PN+ T VL AC+HSG +++GK
Sbjct: 261 MKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK 296
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 37 KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK 96
+L DL N+L++ + SG A ++FDES KD+ +T++I GY N E+L+
Sbjct: 199 RLAMDLT--LRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLE 256
Query: 97 CFVKMRSTGTGVDA------LTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
F KM++ D +T + VL A + +G GK + ++ +
Sbjct: 257 LFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFG 316
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
++D++ + GH DA + ++MP + V W L+
Sbjct: 317 CMVDLFCRSGHLKDAHEFINQMPIKP-NTVIWRTLLGA 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 93/181 (51%), Gaps = 5/181 (2%)
Query: 82 INGYVKNDLPSEALKCFV-KMRSTGTGVDALTVVSVLRAAAMAGDDNF-GKWVHGFYVQA 139
+ Y+++ P +AL F + R + + VD+ +V+ ++ ++ + G+ +H +
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKL 94
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
G + ++L+ Y G D A +VFDE P +++V W+ +++ Y + +AI
Sbjct: 95 G-FNAVIQIQTSLVGFYSSVGDVDYARQVFDETP-EKQNIVLWTAMISAYTENENSVEAI 152
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH-QYIECKKVSLNSVELGTALVD 258
+F M ++ + + +T LSACA GA+ G+ ++ + I+ K+ + L +L++
Sbjct: 153 ELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLN 212
Query: 259 M 259
M
Sbjct: 213 M 213
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS-TGT 106
N +I + G G A +V +S +++I W +I GYV+N EALK M S T
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
+ + S L A A GD + KWVH + +G ++L+ + SAL+D+Y KCG +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSG-IELNAILSSALVDVYAKCGDIGTSR 220
Query: 167 KVFDEMPYSYR--DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
+VF YS + DV W+ ++ G+ +AIRVF M +++V P+ T +L+ C
Sbjct: 221 EVF----YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTC 276
Query: 225 AHSGALDQGK 234
+H G L++GK
Sbjct: 277 SHCGLLEEGK 286
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+++ + G +L+ +AL+ +A G IG++ +VF D+ W A+I G+ + L
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+EA++ F +M + D++T + +L + G GK G + +Q +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
A++D+ + G +A ++ + MP DVV W L++
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIE-PDVVIWRSLLS 342
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNV 210
+++ K G A KV S ++V+ W++++ GYV+ ++++A++ NMLS ++
Sbjct: 104 IIESLMKIGESGLAKKVLRNA--SDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
PN+F+ S L+ACA G L K VH + + LN++ L +ALVD+
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI-LSSALVDV 209
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 114/234 (48%), Gaps = 8/234 (3%)
Query: 3 QKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
Q VEP+ TF K S P V + Q FK G + N++IS F S
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGK--QVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A + F+ S K+++++ ++G +N +A K ++ GV A T S+L
Sbjct: 424 MEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A G G+ +H V+ G + + V +AL+ MY KCG D A +VF+ M R+V
Sbjct: 484 VANVGSIRKGEQIHSQVVKLG-LSCNQPVCNALISMYSKCGSIDTASRVFNFM--ENRNV 540
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ W+ ++ G+ + + F M+ + V PNE T ++LSAC+H G + +G
Sbjct: 541 ISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 127/245 (51%), Gaps = 8/245 (3%)
Query: 1 MRQKGVEP-DQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M + G+ P D TF LLK + +++A++ + + D N+LIS ++ SG
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 59 FIGSACQVFDESSV---KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A VF+ +D+++W+A++ Y N +A+K FV+ G + +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC-DDACKVFDEMPY 174
V+RA + + G+ GF ++ G + D V +L+DM+ K + ++A KVFD+M
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM-- 229
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
S +VV W++++ +Q ++AIR F +M+ ++FTL+SV SACA L GK
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 235 LVHQY 239
+H +
Sbjct: 290 QLHSW 294
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 40 FDLDRFAGNALISAFAN-SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
F+ D G +LI F +A +VFD+ S +++ WT +I ++ P EA++ F
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
+ M +G D T+ SV A A + + GK +H + +++G V V +L+DMY K
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD---DVECSLVDMYAK 314
Query: 159 C---GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQ-CNKFQDAIRVFWNMLSD-NVVPN 213
C G DD KVFD M V+ W+ L+ GY++ CN +AI +F M++ +V PN
Sbjct: 315 CSADGSVDDCRKVFDRM--EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPN 372
Query: 214 EFTLTSVLSACAHSGALDQGKLV 236
FT +S AC + GK V
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQV 395
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+D++T S+L++ A D GK VH ++ ++ D ++++L+ +Y K G A
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFD-IEPDSVLYNSLISLYSKSGDSAKAED 118
Query: 168 VFDEMP-YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
VF+ M + RDVV WS ++A Y + DAI+VF L +VPN++ T+V+ AC++
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 227 SGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
S + G++ ++ + V +G +L+DM
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 5/185 (2%)
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKN-DLPSEALKCFVKMRSTG-TGVDALTVVS 115
G + +VFD +++WTALI GY+KN +L +EA+ F +M + G + T S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+A D GK V G + G + + V ++++ M+ K +DA + F+ + S
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRG-LASNSSVANSVISMFVKSDRMEDAQRAFESL--S 435
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+++V ++ + G + F+ A ++ + + + FT S+LS A+ G++ +G+
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 236 VHQYI 240
+H +
Sbjct: 496 IHSQV 500
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 83/159 (52%), Gaps = 3/159 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I++Q+ KLG ++ NALIS ++ G I +A +VF+ +++I+WT++I G+ K+
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH-GFYVQAGRVQLDGYVW 149
L+ F +M G + +T V++L A + G + G W H + +++ +
Sbjct: 556 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG-WRHFNSMYEDHKIKPKMEHY 614
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
+ ++D+ + G DA + + MP+ DV+ W +
Sbjct: 615 ACMVDLLCRAGLLTDAFEFINTMPFQA-DVLVWRTFLGA 652
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 129/258 (50%), Gaps = 9/258 (3%)
Query: 5 GVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G E H + LL K + D ++A + K + + L+ + + A
Sbjct: 47 GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDA 106
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+V DE K++++WTA+I+ Y + SEAL F +M + + T +VL + A
Sbjct: 107 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA 166
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVW--SALMDMYFKCGHCDDACKVFDEMPYSYRDVVC 181
GK +HG V + D +++ S+L+DMY K G +A ++F+ +P RDVV
Sbjct: 167 SGLGLGKQIHGLIV---KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP--ERDVVS 221
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
+ ++AGY Q ++A+ +F + S+ + PN T S+L+A + LD GK H ++
Sbjct: 222 CTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL 281
Query: 242 CKKVSLNSVELGTALVDM 259
+++ +V L +L+DM
Sbjct: 282 RRELPFYAV-LQNSLIDM 298
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 4/204 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ I K +D F G++L+ +A +G I A ++F+ +D+++ TA+I GY + L
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EAL+ F ++ S G + +T S+L A + + GK H +V + + +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAH-CHVLRRELPFYAVLQN 293
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-N 209
+L+DMY KCG+ A ++FD MP R + W+ ++ GY + ++ + +F M +
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMP--ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 210 VVPNEFTLTSVLSACAHSGALDQG 233
V P+ TL +VLS C+H D G
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTG 375
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 25/205 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+ +G+ P+ T+ LL S +++ + + + N+LI ++ G
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-STGTGVDALTVVSVLR 118
+ A ++FD + I+W A++ GY K+ L E L+ F MR DA+T+++VL
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYV------------WSALMDMYFKCGHCDDAC 166
+ HG G DG V + ++DM + G D+A
Sbjct: 365 GCS-----------HGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAF 413
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQ 191
+ MP V S+L A V
Sbjct: 414 EFIKRMPSKPTAGVLGSLLGACRVH 438
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 4/228 (1%)
Query: 7 EPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
PD TF LK + + I+ + + GF D +L+ ++ +G + A +
Sbjct: 104 RPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASK 163
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
VFDE V+D+++W +I + L ++AL + +M + G D+ T+V++L + A
Sbjct: 164 VFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSA 223
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
N G +H R + +V +AL+DMY KCG ++A VF+ M RDV+ W+ +
Sbjct: 224 LNMGVMLHRIACDI-RCESCVFVSNALIDMYAKCGSLENAIGVFNGM--RKRDVLTWNSM 280
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ GY +AI F M++ V PN T +L C+H G + +G
Sbjct: 281 IIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEG 328
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 53 AFANSGFIGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-STGTGVDA 110
A + +G + A +FD S W LI G+ + P ++ + +M S+ + D
Sbjct: 48 AVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDL 107
Query: 111 LTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFD 170
T L++ +HG +++G + D V ++L+ Y G + A KVFD
Sbjct: 108 FTFNFALKSCERIKSIPKCLEIHGSVIRSGFLD-DAIVATSLVRCYSANGSVEIASKVFD 166
Query: 171 EMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
EMP RD+V W+V++ + A+ ++ M ++ V + +TL ++LS+CAH AL
Sbjct: 167 EMPV--RDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSAL 224
Query: 231 DQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ G ++H+ I C + V + AL+DM
Sbjct: 225 NMGVMLHR-IACDIRCESCVFVSNALIDM 252
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 2/191 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + ++I +A G + SA +F+E+ D+ AW+ALI GY +N P+EA K F +M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
+ D +V ++ A + G + V + Q YV AL+DM KCGH
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHM 356
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
D A K+F+EMP RD+V + ++ G +AIR+F M+ + +VP+E T +L
Sbjct: 357 DRAAKLFEEMP--QRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILK 414
Query: 223 ACAHSGALDQG 233
C S +++G
Sbjct: 415 VCGQSRLVEEG 425
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 12/260 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR PD++TFPL++K+ S V ++ + ++GFD D G + + +
Sbjct: 101 MRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKD 160
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ SA +VF E ++ ++WTAL+ YVK+ EA F M G V ++++
Sbjct: 161 LFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKS 220
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
G V+ + + D +++++D Y K G A +F+E DV
Sbjct: 221 ---------GDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEA--RGVDV 269
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
WS L+ GY Q + +A +VF M + NV P+EF + ++SAC+ G + + V Y
Sbjct: 270 RAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSY 329
Query: 240 IECKKVSLNSVELGTALVDM 259
+ + +S + AL+DM
Sbjct: 330 LHQRMNKFSSHYVVPALIDM 349
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 15/195 (7%)
Query: 31 IYAQIFKLGFDLDR-FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
I+A+I + G + D+ + S+ ++S + + VF+ W LI GY
Sbjct: 29 IHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNKF 88
Query: 90 LPSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
L E + ++M TG D T V++ + G G VHG ++ G D V
Sbjct: 89 LFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIG-FDKDVVV 147
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF------ 202
++ +D Y KC A KVF EMP R+ V W+ LV YV+ + ++A +F
Sbjct: 148 GTSFVDFYGKCKDLFSARKVFGEMP--ERNAVSWTALVVAYVKSGELEEAKSMFDLMPER 205
Query: 203 ----WNMLSDNVVPN 213
WN L D +V +
Sbjct: 206 NLGSWNALVDGLVKS 220
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 115/215 (53%), Gaps = 8/215 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
A++S +A SG A ++F VK++ +WTALI+G+V++ EA F +MR
Sbjct: 175 TAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVD 234
Query: 108 V-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDD 164
+ D L + S++ A A G+ VHG + G D ++ +AL+DMY KC
Sbjct: 235 ILDPLVLSSIVGACANLAASIAGRQVHGLVIALG---FDSCVFISNALIDMYAKCSDVIA 291
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A +F M +RDVV W+ L+ G Q + + A+ ++ +M+S V PNE T ++ AC
Sbjct: 292 AKDIFSRM--RHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYAC 349
Query: 225 AHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+H G +++G+ + Q + S++ T L+D+
Sbjct: 350 SHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDL 384
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 39/263 (14%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A I KLG N L++ + G A QVFDE +D IAW +++ + +L
Sbjct: 25 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANL 84
Query: 91 PSEALKCFVKMRSTGT-GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+ L F + S+ D ++++A A G + G+ VH ++ + D V
Sbjct: 85 SGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN-DEVVK 143
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYS-----------------------------YRDVV 180
S+L+DMY KCG + A VFD + +++
Sbjct: 144 SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLY 203
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNV-VPNEFTLTSVLSACAHSGALDQGKLVHQY 239
W+ L++G+VQ K +A VF M + V + + L+S++ ACA+ A G+ VH
Sbjct: 204 SWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGL 263
Query: 240 IECKKVSL---NSVELGTALVDM 259
+ ++L + V + AL+DM
Sbjct: 264 V----IALGFDSCVFISNALIDM 282
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + LGFD F NALI +A + +A +F +D+++WT+LI G ++
Sbjct: 260 VHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQ 319
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+AL + M S G + +T V ++ A + G G+ + + ++ ++
Sbjct: 320 AEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYT 379
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+D+ + G D+A + MP+ D W+ L++ + + Q IR+ +++S
Sbjct: 380 CLLDLLGRSGLLDEAENLIHTMPFP-PDEPTWAALLSACKRQGRGQMGIRIADHLVSSFK 438
Query: 211 V--PNEFTLTSVLSACA 225
+ P+ + L S + A A
Sbjct: 439 LKDPSTYILLSNIYASA 455
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
K +H V+ G VQ + L+++Y KCG A +VFDEMP+ RD + W+ ++
Sbjct: 22 AKALHAHIVKLGIVQCCPLA-NTLVNVYGKCGAASHALQVFDEMPH--RDHIAWASVLTA 78
Query: 189 YVQCNKFQDAIRVFWNMLSDNVV-PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL 247
Q N + VF ++ S + + P++F ++++ ACA+ G++D G+ VH + + +
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYAN 138
Query: 248 NSVELGTALVDM 259
+ V + ++LVDM
Sbjct: 139 DEV-VKSSLVDM 149
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 116/206 (56%), Gaps = 6/206 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC--QVFDESSVKDIIAWTALINGYVKN 88
I++ + K GFD GN L+ A+A G G A ++FD+ KD +++ ++++ Y ++
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 89 DLPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+ +EA + F ++ ++ +A+T+ +VL A + +G GK +H ++ G ++ D
Sbjct: 265 GMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG-LEDDVI 323
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V ++++DMY KCG + A K FD M ++V W+ ++AGY A+ +F M+
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKN--KNVRSWTAMIAGYGMHGHAAKALELFPAMID 381
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQG 233
V PN T SVL+AC+H+G +G
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEG 407
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 136/271 (50%), Gaps = 18/271 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF---MIYAQIFKLGFDLDRFAGNALISAFANS 57
MR+ + P + +FP +K S + D F + Q F G+ D F +ALI ++
Sbjct: 67 MRKLSLYPTRSSFPCAIKACSS--LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC 124
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM------RSTGTGVDAL 111
G + A +VFDE ++I++WT++I GY N +A+ F + +D++
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM 184
Query: 112 TVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC--KVF 169
+VSV+ A + + +H F ++ G V + L+D Y K G A K+F
Sbjct: 185 GLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGVSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 170 DEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP-NEFTLTSVLSACAHSG 228
D++ +D V ++ +++ Y Q +A VF ++ + VV N TL++VL A +HSG
Sbjct: 244 DQIV--DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
Query: 229 ALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
AL GK +H + + + V +GT+++DM
Sbjct: 302 ALRIGKCIHDQV-IRMGLEDDVIVGTSIIDM 331
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 10/191 (5%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
D+ +W ++I ++ +EAL F MR + ++A + D GK H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 134 GFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
G Q D +V SAL+ MY CG +DA KVFDE+P R++V W+ ++ GY
Sbjct: 100 QQAFVFG-YQSDIFVSSALIVMYSTCGKLEDARKVFDEIP--KRNIVSWTSMIRGYDLNG 156
Query: 194 KFQDAIRVFWNMLSDN------VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL 247
DA+ +F ++L D + + L SV+SAC+ A + +H ++ K+
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV-IKRGFD 215
Query: 248 NSVELGTALVD 258
V +G L+D
Sbjct: 216 RGVSVGNTLLD 226
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ Q+ ++G + D G ++I + G + +A + FD K++ +WTA+I GY +
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG-KWVHGFYVQAGRVQLDGYV- 148
++AL+ F M +G + +T VSVL A + AG G +W F GR ++ +
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRW---FNAMKGRFGVEPGLE 425
Query: 149 -WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
+ ++D+ + G A + M D + WS L+A
Sbjct: 426 HYGCMVDLLGRAGFLQKAYDLIQRMKMK-PDSIIWSSLLAA 465
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 110/228 (48%), Gaps = 8/228 (3%)
Query: 9 DQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+ HTF ++L+ V + A KLG + F LI ++ G I A
Sbjct: 223 ETHTFAVMLRASAGLGSIYVGKQLHVCA--LKLGVVDNTFVSCGLIDMYSKCGDIEDARC 280
Query: 66 VFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
F+ K +AW +I GY + EAL MR +G +D T+ ++R +
Sbjct: 281 AFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK 340
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
K H ++ G + + +AL+D Y K G D A VFD++P ++++ W+ L
Sbjct: 341 LELTKQAHASLIRNG-FESEIVANTALVDFYSKWGRVDTARYVFDKLPR--KNIISWNAL 397
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ GY + DA+++F M++ NV PN T +VLSACA+SG +QG
Sbjct: 398 MGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQG 445
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 4/228 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+Y + GF+ +++ N ++ G I A ++FDE +++ ++ ++I+G+V
Sbjct: 145 VYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGN 204
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA + F M + + T +LRA+A G GK +H ++ G V + +V
Sbjct: 205 YVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVD-NTFVSC 263
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+DMY KCG +DA F+ MP + V W+ ++AGY ++A+ + ++M V
Sbjct: 264 GLIDMYSKCGDIEDARCAFECMP--EKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGV 321
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
++FTL+ ++ L+ K H + + + + TALVD
Sbjct: 322 SIDQFTLSIMIRISTKLAKLELTKQAHASL-IRNGFESEIVANTALVD 368
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 2/187 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR GV DQ T +++++ +K +E +A + + GF+ + A AL+ ++ G
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGR 375
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +A VFD+ K+II+W AL+ GY + ++A+K F KM + + +T ++VL A
Sbjct: 376 VDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSA 435
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
A +G G + + ++ ++ ++++ + G D+A P V
Sbjct: 436 CAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLK-TTV 494
Query: 180 VCWSVLV 186
W+ L+
Sbjct: 495 NMWAALL 501
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 11/247 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+++G+EP TF ++LK S +E I+A I K F D F G+ALI +A G
Sbjct: 349 MQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGS 408
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
Q F +S +DI +WT++I+ +V+N+ A F ++ S+ + TV ++ A
Sbjct: 409 TEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSA 468
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + G+ + G+ +++G +D + V ++ + MY K G+ A +VF E+
Sbjct: 469 CADFAALSSGEQIQGYAIKSG---IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNP-- 523
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DV +S +++ Q +A+ +F +M + + PN+ VL AC H G + QG
Sbjct: 524 DVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGL--- 580
Query: 238 QYIECKK 244
+Y +C K
Sbjct: 581 KYFQCMK 587
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 119/229 (51%), Gaps = 12/229 (5%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
G F N LI ++ G + A +FD +D ++W +LI+GYV+ E L
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLL 237
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNF---GKWVHGFYVQAGRVQLDGYVWSALMDM 155
KM G + + SVL+A + ++ F G +H + + G ++ D V +AL+DM
Sbjct: 238 AKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG-MEFDIVVRTALLDM 296
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD-----AIRVFWNMLSDNV 210
Y K G +A K+F MP ++VV ++ +++G++Q ++ D A ++F +M +
Sbjct: 297 YAKNGSLKEAIKLFSLMP--SKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGL 354
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+ T + VL AC+ + L+ G+ +H I CK + +G+AL+++
Sbjct: 355 EPSPSTFSVVLKACSAAKTLEYGRQIHALI-CKNNFQSDEFIGSALIEL 402
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 7/203 (3%)
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+G A Q+FD ++II++ +LI+GY + +A++ F++ R +D T L
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
D + G+ +HG V G Q ++ + L+DMY KCG D A +FD RD
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQ-QVFLINVLIDMYSKCGKLDQAMSLFDRC--DERDQ 214
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA---HSGALDQGKLV 236
V W+ L++GYV+ ++ + + M D + + L SVL AC + G +++G +
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H Y + + V + TAL+DM
Sbjct: 275 HCYTAKLGMEFDIV-VRTALLDM 296
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 106 TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
T +D+ + + AA +G GK HG +++ Y+ + L++MY KC A
Sbjct: 43 TALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCL-YLLNNLLNMYCKCRELGFA 101
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
++FD MP R+++ ++ L++GY Q ++ A+ +F N+ ++FT L C
Sbjct: 102 RQLFDRMP--ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 226 HSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
LD G+L+H + +S V L L+DM
Sbjct: 160 ERCDLDLGELLHGLVVVNGLS-QQVFLINVLIDM 192
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +++ + +G + SA ++F E +D ++W+ +I G N +E+ F +++ G
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW-----SALMDMYFKCGHC 162
+ +++ VL A + +G FGK +HGF V+ GY W +AL+DMY +CG+
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGF------VEKAGYSWIVSVNNALIDMYSRCGNV 320
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
A VF+ M R +V W+ ++AG + ++A+R+F M + V P+ + S+L
Sbjct: 321 PMARLVFEGMQ-EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLH 379
Query: 223 ACAHSGALDQGK 234
AC+H+G +++G+
Sbjct: 380 ACSHAGLIEEGE 391
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 44/260 (16%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ V PD +F ++K + F ++ Q K G + F G LI + G
Sbjct: 97 MRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGC 156
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A +VFDE +++AW A+I + + + A + F KM
Sbjct: 157 VEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKM------------------ 198
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + W+ ++ Y K G + A ++F EMP+ RD
Sbjct: 199 ----------------------LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPH--RDD 234
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V WS ++ G F ++ F + + PNE +LT VLSAC+ SG+ + GK++H +
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF 294
Query: 240 IECKKVSLNSVELGTALVDM 259
+E S V + AL+DM
Sbjct: 295 VEKAGYSW-IVSVNNALIDM 313
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 92/194 (47%), Gaps = 13/194 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+++ G+ P++ + +L S+ E +++ + K G+ NALI ++ G
Sbjct: 260 LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGN 319
Query: 60 IGSACQVFDESSVKD-IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ A VF+ K I++WT++I G + EA++ F +M + G D ++ +S+L
Sbjct: 320 VPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLH 379
Query: 119 AAAMA-----GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
A + A G+D F + ++++ +++ Y ++D+Y + G A +MP
Sbjct: 380 ACSHAGLIEEGEDYFSEMKRVYHIEP---EIEHY--GCMVDLYGRSGKLQKAYDFICQMP 434
Query: 174 YSYRDVVCWSVLVA 187
+V W L+
Sbjct: 435 IPPTAIV-WRTLLG 447
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 112/202 (55%), Gaps = 8/202 (3%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
K GF D + G++L+ + +SG + +A +VF+E +++++WTA+I+G+ + L
Sbjct: 147 LKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICL 206
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALM 153
K + KMR + + + T ++L A +G G+ VH Q + L Y + ++L+
Sbjct: 207 KLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVH---CQTLHMGLKSYLHISNSLI 263
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML-SDNVVP 212
MY KCG DA ++FD+ +S +DVV W+ ++AGY Q AI +F M+ P
Sbjct: 264 SMYCKCGDLKDAFRIFDQ--FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 213 NEFTLTSVLSACAHSGALDQGK 234
+ T VLS+C H+G + +G+
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGR 343
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG 160
++ G DA + S +R+ + D G H ++ G + D Y+ S+L+ +Y G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFIS-DVYLGSSLVVLYRDSG 169
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSV 220
++A KVF+EMP R+VV W+ +++G+ Q + ++++ M PN++T T++
Sbjct: 170 EVENAYKVFEEMPE--RNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 221 LSACAHSGALDQGKLVH 237
LSAC SGAL QG+ VH
Sbjct: 228 LSACTGSGALGQGRSVH 244
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ +P+ +TF LL + + ++ Q +G N+LIS + G
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF-VKMRSTGTGVDALTVVSVLR 118
+ A ++FD+ S KD+++W ++I GY ++ L +A++ F + M +GT DA+T + VL
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLS 331
Query: 119 AAAMAGDDNFGKWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ AG G+ + G + +L+ Y S L+D+ + G +A ++ + MP
Sbjct: 332 SCRHAGLVKEGRKFFNLMAEHGLKPELNHY--SCLVDLLGRFGLLQEALELIENMPMKPN 389
Query: 178 DVVCWSVLVAGYVQ 191
V+ S+L + V
Sbjct: 390 SVIWGSLLFSCRVH 403
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 131/257 (50%), Gaps = 9/257 (3%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
GV+ D T+P ++K + +E+ I+A + KLGF D + N+LIS + G A
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+VF+E +DI++W ++I+GY+ +L F +M G D + +S L A +
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
GK +H V++ D V ++++DMY K G A ++F+ M R++V W+
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMI--QRNIVAWN 302
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDN-VVPNEFTLTSVLSACAHSGALDQGKLVHQYIEC 242
V++ Y + + DA F M N + P+ T ++L A A+ +G+ +H Y
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGY-AM 357
Query: 243 KKVSLNSVELGTALVDM 259
++ L + L TAL+DM
Sbjct: 358 RRGFLPHMVLETALIDM 374
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 20 FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWT 79
F + + ++ +K+ ++ A + FA+S + A Q+FDE + D W
Sbjct: 40 FDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWN 99
Query: 80 ALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQA 139
+I G+ L EA++ + +M G D T V+++ A GK +H ++
Sbjct: 100 VMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKL 159
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
G V D YV ++L+ +Y K G DA KVF+EMP RD+V W+ +++GY+ ++
Sbjct: 160 GFVS-DVYVCNSLISLYMKLGCAWDAEKVFEEMP--ERDIVSWNSMISGYLALGDGFSSL 216
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+F ML P+ F+ S L AC+H + GK +H + ++ V + T+++DM
Sbjct: 217 MLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM 276
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 118/212 (55%), Gaps = 9/212 (4%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTG 107
+++ ++ G + A ++F+ ++I+AW +I Y +N ++A CF KM G
Sbjct: 272 SILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQ 331
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D +T +++L A+A+ G+ +HG+ ++ G + + +AL+DMY +CG A
Sbjct: 332 PDVITSINLLPASAILE----GRTIHGYAMRRGFLP-HMVLETALIDMYGECGQLKSAEV 386
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
+FD M + ++V+ W+ ++A YVQ K A+ +F + ++VP+ T+ S+L A A S
Sbjct: 387 IFDRM--AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAES 444
Query: 228 GALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+L +G+ +H YI + N++ L + LV M
Sbjct: 445 LSLSEGREIHAYIVKSRYWSNTIILNS-LVHM 475
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 120/231 (51%), Gaps = 6/231 (2%)
Query: 3 QKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
Q G++PD T + + + + I+ + GF ALI + G + S
Sbjct: 327 QNGLQPDVITS---INLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A +FD + K++I+W ++I YV+N AL+ F ++ + D+ T+ S+L A A
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAE 443
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
+ + G+ +H + V++ R + + ++L+ MY CG +DA K F+ + +DVV W
Sbjct: 444 SLSLSEGREIHAYIVKS-RYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL--LKDVVSW 500
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ ++ Y + ++ +F M++ V PN+ T S+L+AC+ SG +D+G
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 48 NALISAFANSGFIGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
NALI+ + G + ++F + +D + W ++I+GY+ N+L ++AL M TG
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ 615
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
+D+ +VL A A G VH V+A ++ D V SAL+DMY KCG D A
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDYAL 674
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACA 225
+ F+ MP R+ W+ +++GY + + ++A+++F M L P+ T VLSAC+
Sbjct: 675 RFFNTMPV--RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS 732
Query: 226 HSGALDQG 233
H+G L++G
Sbjct: 733 HAGLLEEG 740
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND- 89
I+ + KLG DL+ NAL++ +A +G++ ++F D ++W ++I +++
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 496
Query: 90 -LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
LP EA+ CF+ + G ++ +T SVL A + GK +HG ++ + +
Sbjct: 497 SLP-EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALK-NNIADEATT 554
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL+ Y KCG D K+F M RD V W+ +++GY+ A+ + W ML
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMA-ERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ F +VLSA A L++G VH + + V +G+ALVDM
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHA-CSVRACLESDVVVGSALVDM 663
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 9/244 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M+ G P ++TF L+ ++P V I I K G D F G+ L+SAFA S
Sbjct: 197 MQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST--GTGVDALTVVS 115
G + A +VF++ ++ + L+ G V+ EA K F+ M S + + ++S
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLS 316
Query: 116 VLRAAAMAGDDNF--GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
++A + G+ VHG + G V + + L++MY KCG DA +VF M
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM- 375
Query: 174 YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ +D V W+ ++ G Q F +A+ + +M +++P FTL S LS+CA G
Sbjct: 376 -TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 234 KLVH 237
+ +H
Sbjct: 435 QQIH 438
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 7/198 (3%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
+++++K D D + N LI+A+ +G SA +VFDE +++ ++W +++GY +N
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDN--FGKWVHGFYVQAGRVQLDGYVW 149
EAL M G + VSVLRA G FG+ +HG + +D V
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS-YAVDAVVS 142
Query: 150 SALMDMYFKC-GHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+ L+ MY+KC G A F ++ ++ V W+ +++ Y Q + A R+F +M D
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDI--EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 209 NVVPNEFTLTS-VLSACA 225
P E+T S V +AC+
Sbjct: 201 GSRPTEYTFGSLVTTACS 218
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 4/192 (2%)
Query: 47 GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
GN L++ +A G I A +VF + KD ++W ++I G +N EA++ + MR
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
+ T++S L + A G+ +HG ++ G + L+ V +ALM +Y + G+ ++
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG-IDLNVSVSNALMTLYAETGYLNECR 470
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNK-FQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
K+F MP D V W+ ++ + + +A+ F N N T +SVLSA +
Sbjct: 471 KIFSSMP--EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVS 528
Query: 226 HSGALDQGKLVH 237
+ GK +H
Sbjct: 529 SLSFGELGKQIH 540
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
R+ D Y+ + L++ Y + G A KVFDEMP R+ V W+ +V+GY + + ++A+
Sbjct: 31 RLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL--RNCVSWACIVSGYSRNGEHKEALV 88
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ--GKLVH 237
+M+ + + N++ SVL AC G++ G+ +H
Sbjct: 89 FLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIH 127
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q G D + +L F S +E ++A + + D G+AL+ ++ G
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG-TGVDALTVVSVLR 118
+ A + F+ V++ +W ++I+GY ++ EALK F M+ G T D +T V VL
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 119 AAAMAG--DDNFGKW--VHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
A + AG ++ F + + Y A R++ +S + D+ + G D ++MP
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEH----FSCMADVLGRAGELDKLEDFIEKMPM 785
Query: 175 SYRDVVCWSVLVAGYVQCN 193
+V+ W ++ + N
Sbjct: 786 K-PNVLIWRTVLGACCRAN 803
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 12/237 (5%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANS-GFIGSACQVFDESSVKDIIAWTALINGYVKND 89
I+ +FKL + +D N LIS + G +G A F + VK+ ++W ++I+ Y +
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGF-YVQAGRVQLDGYV 148
A + F M+ G+ T S++ A + + +Q + D +V
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS- 207
S L+ + K G A KVF++M R+ V + L+ G V+ ++A ++F +M S
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQM--ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 208 DNVVPNEFTLTSVLS-----ACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+V P + + +LS + A L +G+ VH ++ + V +G LV+M
Sbjct: 304 IDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNM 358
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 129/295 (43%), Gaps = 39/295 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KG+ PD T+P +LK + + V +++ I + + NALIS +
Sbjct: 135 MVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRN 194
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM------------------ 101
+G A ++FD +D ++W A+IN Y + SEA + F KM
Sbjct: 195 MGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGG 254
Query: 102 -----------------RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
R+ T +D + ++ L+A ++ G GK +HG + + +
Sbjct: 255 CLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGI 314
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D V + L+ MY KC A VF + + + W+ +++GY Q NK ++A +
Sbjct: 315 DN-VRNTLITMYSKCKDLRHALIVFRQTEEN--SLCTWNSIISGYAQLNKSEEASHLLRE 371
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
ML PN TL S+L CA L GK H YI +K + L +LVD+
Sbjct: 372 MLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDV 426
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 2/196 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N LI+ ++ + A VF ++ + W ++I+GY + + EA +M G
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+++T+ S+L A + GK H + ++ + +W++L+D+Y K G A +
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
V D M S RD V ++ L+ GY + A+ +F M + P+ T+ +VLSAC+HS
Sbjct: 439 VSDLM--SKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHS 496
Query: 228 GALDQGKLVHQYIECK 243
+ +G+ + ++C+
Sbjct: 497 KLVHEGERLFMKMQCE 512
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 3/198 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A G + L++ ++ A + + S + + W LI Y KN+L
Sbjct: 65 VHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNEL 124
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E + + +M S G DA T SVL+A D FG+ VHG ++ + YV +
Sbjct: 125 FEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG-SIEVSSYKSSLYVCN 183
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+ MY + + A ++FD M RD V W+ ++ Y + +A +F M V
Sbjct: 184 ALISMYKRFRNMGIARRLFDRM--FERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGV 241
Query: 211 VPNEFTLTSVLSACAHSG 228
+ T + C +G
Sbjct: 242 EVSVITWNIISGGCLQTG 259
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+L+ +A SG I +A QV D S +D + +T+LI+GY AL F +M +G
Sbjct: 421 NSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIK 480
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV------WSALMDMYFKCGH 161
D +TVV+VL A + + K VH ++Q + + +S ++D+Y + G
Sbjct: 481 PDHVTVVAVLSACSHS------KLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGF 534
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
A + MPY ++L A ++ N
Sbjct: 535 LAKAKDIIHNMPYKPSGATWATLLNACHIHGN 566
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 182 WSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
W+VL+A Y + F++ I + M+S + P+ FT SVL AC + + G++VH IE
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 242 CKKVSLNSVELGTALVDM 259
+S+ + AL+ M
Sbjct: 172 VSSYK-SSLYVCNALISM 188
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 136/261 (52%), Gaps = 7/261 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN-SG 58
M ++G P++ T +LK + V+ +++ + KLG + + NA+++ +A S
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ +AC +F + VK+ + WT LI G+ LK + +M V + +R
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A+A GK +H ++ G Q + V ++++D+Y +CG+ +A F EM +D
Sbjct: 222 ASASIDSVTTGKQIHASVIKRG-FQSNLPVMNSILDLYCRCGYLSEAKHYFHEM--EDKD 278
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
++ W+ L++ + + +A+ +F S VPN +T TS+++ACA+ AL+ G+ +H
Sbjct: 279 LITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 239 YIECKKVSLNSVELGTALVDM 259
I + + N VEL AL+DM
Sbjct: 338 RIFRRGFNKN-VELANALIDM 357
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A + K GF + N+++ + G++ A F E KD+I W LI+ ++D
Sbjct: 235 IHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD- 293
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
SEAL F + S G + T S++ A A N G+ +HG + G + + +
Sbjct: 294 SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRG-FNKNVELAN 352
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+DMY KCG+ D+ +VF E+ R++V W+ ++ GY +A+ +F M+S +
Sbjct: 353 ALIDMYAKCGNIPDSQRVFGEI-VDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
P+ +VLSAC H+G +++G
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKG 434
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
A N ++S F G + A +FDE +D++AWTA+I GY ++ + A +CF +M
Sbjct: 47 LATNLIVSYF-EKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG-HCD 163
GT + T+ SVL++ +G VHG V+ G ++ YV +A+M+MY C +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLG-MEGSLYVDNAMMNMYATCSVTME 164
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
AC +F ++ ++ V W+ L+ G+ ++++ ML +N + +T + A
Sbjct: 165 AACLIFRDI--KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRA 222
Query: 224 CAHSGALDQGKLVH 237
A ++ GK +H
Sbjct: 223 SASIDSVTTGKQIH 236
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 7/263 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+ Q+G+ + TF LL+ + + ++ I G + + F L+ + G
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS 161
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLP--SEALKCFVKMRSTGTGVDALTVVSVL 117
+ A +VFDES+ ++ +W AL+ G V + + L F +MR G ++ ++ +V
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
++ A A G H ++ G ++ ++L+DMYFKCG A +VFDE+ R
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFN-SVFLKTSLVDMYFKCGKVGLARRVFDEI--VER 278
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQGKLV 236
D+V W ++AG + +A+ +F M+S + + PN LT++L AL GK V
Sbjct: 279 DIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H ++ K + + + L+D+
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDL 361
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 5/261 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ GV+ + ++ + K F+ + +A K G F +L+ + G
Sbjct: 205 MRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGK 264
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS-TGTGVDALTVVSVLR 118
+G A +VFDE +DI+ W A+I G N EAL F M S +++ + ++L
Sbjct: 265 VGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILP 324
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
GK VH +++ +V S L+D+Y KCG +VF R+
Sbjct: 325 VLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF--YGSKQRN 382
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ W+ L++GY +F A+R M + P+ T+ +VL CA A+ QGK +H
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHC 442
Query: 239 YIECKKVSLNSVELGTALVDM 259
Y K + L +V L T+L+ M
Sbjct: 443 Y-ALKNLFLPNVSLVTSLMVM 462
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 3/196 (1%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F + LI + G + S +VF S ++ I+WTAL++GY N +AL+ V M+
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G D +T+ +VL A GK +H + ++ + V ++LM MY KCG +
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV-TSLMVMYSKCGVPEY 471
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
++FD + R+V W+ ++ YV+ + I VF ML P+ T+ VL+ C
Sbjct: 472 PIRLFDRL--EQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVC 529
Query: 225 AHSGALDQGKLVHQYI 240
+ AL GK +H +I
Sbjct: 530 SDLKALKLGKELHGHI 545
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 6/235 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+Q+G PD T +L + ++ ++ I+ K F + +L+ ++ G
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
++FD +++ AWTA+I+ YV+N ++ F M + D++T+ VL
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ GK +HG ++ + +V + ++ MY KCG A FD + + +
Sbjct: 529 CSDLKALKLGKELHG-HILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAV--AVKGS 585
Query: 180 VCWSVLVAGYVQCNK-FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ W+ ++ Y CN+ F+DAI F M+S PN FT T+VLS C+ +G +D+
Sbjct: 586 LTWTAIIEAY-GCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEA 639
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ I K F+ F +I + G + SA FD +VK + WTA+I Y N+L
Sbjct: 541 LHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNEL 600
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
+A+ CF +M S G + T +VL + AG + ++ +Q +S
Sbjct: 601 FRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYS 660
Query: 151 ALMDMYFKCGHCDDACKV 168
++++ +CG ++A ++
Sbjct: 661 LVIELLNRCGRVEEAQRL 678
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 8/262 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+R KG+ D+ +F LK S+ + V ++ + GF + NALI + G
Sbjct: 116 LRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGK 175
Query: 60 IGSACQVFDE--SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
I A +VFDE SV D + ++ L+NGY++ + AL F MR + V+ T++S L
Sbjct: 176 ISDARKVFDEMPQSV-DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFL 234
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + GD + + H ++ G + LD ++ +AL+ MY K G A ++FD +
Sbjct: 235 SAISDLGDLSGAESAHVLCIKIG-LDLDLHLITALIGMYGKTGGISSARRIFD--CAIRK 291
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DVV W+ ++ Y + ++ + + M + + PN T +LS+CA+S A G+ V
Sbjct: 292 DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA 351
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+E ++++L+++ LGTALVDM
Sbjct: 352 DLLEEERIALDAI-LGTALVDM 372
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 106/200 (53%), Gaps = 5/200 (2%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
K+G DLD ALI + +G I SA ++FD + KD++ W +I+ Y K L E +
Sbjct: 254 IKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECV 313
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
+M+ ++ T V +L + A + G+ V ++ R+ LD + +AL+DM
Sbjct: 314 WLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADL-LEEERIALDAILGTALVDM 372
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN--VVPN 213
Y K G + A ++F+ M +DV W+ +++GY ++A+ +F M +N V PN
Sbjct: 373 YAKVGLLEKAVEIFNRMK--DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPN 430
Query: 214 EFTLTSVLSACAHSGALDQG 233
E T VL+AC+H G + +G
Sbjct: 431 EITFLVVLNACSHGGLVMEG 450
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 121/230 (52%), Gaps = 6/230 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + K G D D FA + L+ AF++ I A +F+ S ++ + +I GY +D
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P A F ++R+ G +D + ++ L++ + + G+ +HG +++G + + +
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTD-LRN 164
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+ Y CG DA KVFDEMP S D V +S L+ GY+Q +K A+ +F M V
Sbjct: 165 ALIHFYCVCGKISDARKVFDEMPQSV-DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLN-SVELGTALVDM 259
V N TL S LSA + G L + H + C K+ L+ + L TAL+ M
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAH--VLCIKIGLDLDLHLITALIGM 271
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 42 LDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM 101
LD G AL+ +A G + A ++F+ KD+ +WTA+I+GY + L EA+ F KM
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
Query: 102 RSTGTGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC 159
V + +T + VL A + G G V+A + ++D+ +
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480
Query: 160 GHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G ++A ++ +P + D W L+A
Sbjct: 481 GQLEEAYELIRNLPIT-SDSTAWRALLAA 508
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 136/262 (51%), Gaps = 8/262 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS--KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
MR+ V P+ T+ L S + +VE I+A ++K G + + +AL+ ++ G
Sbjct: 247 MRRGLVHPNSVTYLSALAACSGSQRIVEGQ-QIHALLWKYGIESELCIESALMDMYSKCG 305
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I A +F+ ++ D ++ T ++ G +N EA++ F++M G +DA V +VL
Sbjct: 306 SIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG 365
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ + GK +H ++ + + +V + L++MY KCG D+ VF MP R+
Sbjct: 366 VSFIDNSLGLGKQLHSLVIKR-KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP--KRN 422
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK-LVH 237
V W+ ++A + + A++++ M + V P + T S+L AC+H G +D+G+ L++
Sbjct: 423 YVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLN 482
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ E + + E T ++DM
Sbjct: 483 EMKEVHGIEPRT-EHYTCIIDM 503
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 4/230 (1%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
MI+A G+D + GN LI+++ G S VFD S +++I TA+I+G ++N+
Sbjct: 176 MIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENE 235
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
L + L+ F MR +++T +S L A + + G+ +H + G ++ + +
Sbjct: 236 LHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYG-IESELCIE 294
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
SALMDMY KCG +DA +F+ + D V +V++ G Q ++AI+ F ML
Sbjct: 295 SALMDMYSKCGSIEDAWTIFEST--TEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
V + +++VL +L GK +H + +K S N+ + L++M
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF-VNNGLINM 401
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+L+S +A G + A ++FDE ++D+I+ + G+++N +M +G G
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-G 152
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D T+ VL K +H + +G + + V + L+ YFKCG
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDK-EISVGNKLITSYFKCGCSVSGRG 211
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VFD M S+R+V+ + +++G ++ +D +R+F M V PN T S L+AC+ S
Sbjct: 212 VFDGM--SHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 228 GALDQGKLVH 237
+ +G+ +H
Sbjct: 270 QRIVEGQQIH 279
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
VW++L+ +Y KCG DA K+FDEMP RDV+ +++ G+++ + + + ML
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMP--MRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 208 DNVVPNEFTLTSVLSAC 224
+ TLT VLS C
Sbjct: 150 SGGF-DHATLTIVLSVC 165
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 6/207 (2%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGF---IGSACQVFDESSVKDIIAWTALINGYVKN 88
+ ++ K GF + G+ LI ++ G + + +VF E D++ W +I+GY N
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMN 322
Query: 89 D-LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
+ L EA+K F +M+ G D + V V A + + K +HG +++
Sbjct: 323 EELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
V +AL+ +Y+K G+ DA VFD MP + V ++ ++ GY Q +A+ ++ ML
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMPE--LNAVSFNCMIKGYAQHGHGTEALLLYQRMLD 440
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGK 234
+ PN+ T +VLSACAH G +D+G+
Sbjct: 441 SGIAPNKITFVAVLSACAHCGKVDEGQ 467
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 12/228 (5%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVF---DESSVKDIIAWTALINGYVKNDLPSEAL 95
GFD NA ++ ++ G + A VF DE ++D ++W ++I Y ++ ++AL
Sbjct: 168 GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE--LRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
+ +M G +D T+ SVL A G+ HG ++AG Q + +V S L+D
Sbjct: 226 ALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ-NSHVGSGLIDF 284
Query: 156 YFKCGHCD---DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKF-QDAIRVFWNMLSDNVV 211
Y KCG CD D+ KVF E+ D+V W+ +++GY + ++A++ F M
Sbjct: 285 YSKCGGCDGMYDSEKVFQEILSP--DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHR 342
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P++ + V SAC++ + Q K +H + N + + AL+ +
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISL 390
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F+ N ++ A+A I A Q+FDE D +++ LI+GY A+ F +MR
Sbjct: 75 FSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKL 134
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCGHC 162
G VD T+ ++ AA + K +H F V G D Y V +A + Y K G
Sbjct: 135 GFEVDGFTLSGLI--AACCDRVDLIKQLHCFSVSGG---FDSYSSVNNAFVTYYSKGGLL 189
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLS 222
+A VF M RD V W+ ++ Y Q + A+ ++ M+ + FTL SVL+
Sbjct: 190 REAVSVFYGMD-ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 223 ACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
A L G+ H + NS +G+ L+D
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNS-HVGSGLID 283
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NALIS + SG + A VFD + +++ +I GY ++ +EAL + +M +G
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIA 444
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ +T V+VL A A G + G+ + +++ + +S ++D+ + G ++A +
Sbjct: 445 PNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
D MPY V W+ L+ C K + NM NE + L+A
Sbjct: 505 FIDAMPYK-PGSVAWAALLGA---CRKHK-------NMALAERAANELMVMQPLAA 549
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 127/276 (46%), Gaps = 47/276 (17%)
Query: 7 EPDQHTFPLLLKMFSKPVVEDPF---MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
+PD TFP +LK+ + V D + I+ Q+ GFD LI + + G +G A
Sbjct: 113 KPDTFTFPFVLKIAVR--VSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDA 170
Query: 64 CQVFDESSVKDIIAWTAL---------------------------------INGYVKNDL 90
++FDE VKD+ W AL I+GY K+
Sbjct: 171 RKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGR 230
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR---VQLDGY 147
SEA++ F +M D +T+++VL A A G G+ + + G V L+
Sbjct: 231 ASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLN-- 288
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+A++DMY K G+ A VF+ + R+VV W+ ++AG +A+ +F M+
Sbjct: 289 --NAVIDMYAKSGNITKALDVFE--CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVK 344
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
V PN+ T ++LSAC+H G +D GK + + K
Sbjct: 345 AGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSK 380
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 34/254 (13%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP---SEAL 95
G + D I A +N+G + A VF + +I D P S A+
Sbjct: 42 GLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAI 101
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG----------FYVQAGRVQL- 144
+ K+ + D T VL+ A D FG+ +HG +V G +Q+
Sbjct: 102 TVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMY 161
Query: 145 -------------------DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVL 185
D VW+AL+ Y K G D+A + + MP R+ V W+ +
Sbjct: 162 FSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCV 221
Query: 186 VAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV 245
++GY + + +AI VF ML +NV P+E TL +VLSACA G+L+ G+ + Y++ + +
Sbjct: 222 ISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGM 281
Query: 246 SLNSVELGTALVDM 259
+ +V L A++DM
Sbjct: 282 N-RAVSLNNAVIDM 294
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 7/189 (3%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NAL+S + +SG IG A +F E K+I++W +I+G +N E LK F M+ G
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDA 165
+++ A+ G G+ H Q ++ D + +AL+ MY KCG ++A
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQYHA---QLLKIGFDSSLSAGNALITMYAKCGVVEEA 471
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
+VF MP D V W+ L+A Q +A+ V+ ML + P+ TL +VL+AC+
Sbjct: 472 RQVFRTMP--CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS 529
Query: 226 HSGALDQGK 234
H+G +DQG+
Sbjct: 530 HAGLVDQGR 538
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 48/272 (17%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDP---FMIYAQIFKLGFDLDRFAGNALISAFA-- 55
M+ +G +PD TF +L + V +D +A K G NAL+S ++
Sbjct: 139 MKHEGFKPDNFTFASVLAGLAL-VADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 56 --NSGFIGSACQVFDESSVKDIIAWT--------------------------------AL 81
+ + SA +VFDE KD +WT A+
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
I+GYV EAL+ +M S+G +D T SV+RA A AG GK VH + ++ R
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR--R 315
Query: 142 VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
+ ++L+ +Y+KCG D+A +F++MP +D+V W+ L++GYV +A +
Sbjct: 316 EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP--AKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
F M N++ + ++S A +G ++G
Sbjct: 374 FKEMKEKNIL----SWMIMISGLAENGFGEEG 401
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 47/276 (17%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFMIYA-QIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G +P H L+ ++ K + YA Q+F + D+ A ++S + SG I A
Sbjct: 44 GFQPRAHILNRLIDVYCK----SSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLA 99
Query: 64 CQVFDESSV--KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
VF+++ V +D + + A+I G+ N+ A+ F KM+ G D T SVL A
Sbjct: 100 RGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA 159
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYVWS---ALMDMYFKCGHC----DDACKVFDEM-- 172
+ DD K F+ A + GY+ S AL+ +Y KC A KVFDE+
Sbjct: 160 LVADDE--KQCVQFHAAALKSGA-GYITSVSNALVSVYSKCASSPSLLHSARKVFDEILE 216
Query: 173 --------------PYSYRD--------------VVCWSVLVAGYVQCNKFQDAIRVFWN 204
Y D +V ++ +++GYV +Q+A+ +
Sbjct: 217 KDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRR 276
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
M+S + +EFT SV+ ACA +G L GK VH Y+
Sbjct: 277 MVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVE---DPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M+++G EP + F +K S V+ + +AQ+ K+GFD AGNALI+ +A
Sbjct: 408 MKREGFEPCDYAFSGAIK--SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKC 465
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G + A QVF D ++W ALI ++ +EA+ + +M G D +T+++VL
Sbjct: 466 GVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVL 525
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + AG + G+ R+ ++ L+D+ + G DA V + +P+
Sbjct: 526 TACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPT 585
Query: 178 DVVCWSVLVAG 188
+ W L++G
Sbjct: 586 AEI-WEALLSG 595
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGT 106
NALI+ F +G + A +VFD++ KDI +W A+I+GY ++ P AL F +M S+
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
DA+T+VSV A + G GK H Y+ + + + +A++DMY KCG + A
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHD-YLNFSTIPPNDNLTAAIIDMYAKCGSIETAL 493
Query: 167 KVFDEMP-YSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
+F + S + W+ ++ G + A+ ++ ++ S + PN T VLSAC
Sbjct: 494 NIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC 553
Query: 226 HSGALDQGK 234
H+G ++ GK
Sbjct: 554 HAGLVELGK 562
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 34/243 (13%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +++ ++ +G I A ++FD+ + KDI++W +I+G ++ + EAL + +M G
Sbjct: 243 NVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMK 302
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG---------------------RVQLDG 146
+ +V +L A+A + + G +HG V+ G ++ L
Sbjct: 303 PSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQ 362
Query: 147 YVWS---------ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD 197
+ S AL+ + K G + A +VFD+ +D+ W+ +++GY Q Q
Sbjct: 363 FEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT--HDKDIFSWNAMISGYAQSLSPQL 420
Query: 198 AIRVFWNMLSDN-VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTAL 256
A+ +F M+S + V P+ T+ SV SA + G+L++GK H Y+ + N L A+
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPND-NLTAAI 479
Query: 257 VDM 259
+DM
Sbjct: 480 IDM 482
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 36/238 (15%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEA 94
+F+ LD + N ++ + S + A ++FD + +++T LI GY +N+ SEA
Sbjct: 98 VFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA 157
Query: 95 LKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKW-VHGFYVQAGRVQLDG--YVWSA 151
++ F +MR+ G ++ +T+ +V+ A + G G W A +++L+G +V +
Sbjct: 158 MELFREMRNLGIMLNEVTLATVISACSHLG----GIWDCRMLQSLAIKLKLEGRVFVSTN 213
Query: 152 LMDMYFKCGHCDDACKVFDEMP-----------------------------YSYRDVVCW 182
L+ MY C DA K+FDEMP + +D+V W
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
++ G ++ N+ +A+ + ML + P+E + +LSA A S +G +H I
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTI 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 34/149 (22%)
Query: 113 VVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC-----------GH 161
+VS L + A + D G+ +H +++G + +GY+ +++++MY KC H
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSG-LDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 162 CD--------------------DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
DA K+FD MP R V ++ L+ GY Q N++ +A+ +
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMP--ERSCVSYTTLIKGYAQNNQWSEAMEL 160
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
F M + ++ NE TL +V+SAC+H G +
Sbjct: 161 FREMRNLGIMLNEVTLATVISACSHLGGI 189
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 110/192 (57%), Gaps = 11/192 (5%)
Query: 48 NALISAFANSGFIGSACQVFD---ESSVK-DIIAWTALINGYVKNDLPSEALKCFVKMRS 103
NA I+ + +G + A ++F+ E +++ ++++WT++I G +N EAL+ F +M+
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL--DGYVWSALMDMYFKCGH 161
G + +T+ S+L A G+ HGF V RV L + +V SAL+DMY KCG
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV---RVHLLDNVHVGSALIDMYAKCGR 438
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
+ + VF+ MP +++VCW+ L+ G+ K ++ + +F +++ + P+ + TS+L
Sbjct: 439 INLSQIVFNMMPT--KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLL 496
Query: 222 SACAHSGALDQG 233
SAC G D+G
Sbjct: 497 SACGQVGLTDEG 508
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 141/331 (42%), Gaps = 77/331 (23%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKL----GFDLDRFAGNALISAFAN 56
M G+ PD H P L K+ ++ F + QI + G D+D F ++ +
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAEL---SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMR 163
Query: 57 SGFIGSACQVFDESSVKD-----------------------------------IIAWTAL 81
G +G A +VFD S KD I++W +
Sbjct: 164 CGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGI 223
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
++G+ ++ EA+ F K+ G D +TV SVL + + N G+ +HG+ ++ G
Sbjct: 224 LSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGL 283
Query: 142 VQLDGYVWSALMDMYFKCGHCDDACKVFD---------------------------EMPY 174
++ D V SA++DMY K GH +F+ EM
Sbjct: 284 LK-DKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 175 SYRD------VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
+++ VV W+ ++AG Q K +A+ +F M V PN T+ S+L AC +
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 229 ALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
AL G+ H + + L++V +G+AL+DM
Sbjct: 403 ALGHGRSTHGF-AVRVHLLDNVHVGSALIDM 432
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 117/263 (44%), Gaps = 39/263 (14%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
+A+I K G D + LI++++N A V I ++++LI K L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
++++ F +M S G D+ + ++ + A GK +H +G + +D +V +
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG-LDMDAFVQGS 156
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD--- 208
+ MY +CG DA KVFD M S +DVV S L+ Y + ++ +R+ M S
Sbjct: 157 MFHMYMRCGRMGDARKVFDRM--SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 209 -NVV-------------------------------PNEFTLTSVLSACAHSGALDQGKLV 236
N+V P++ T++SVL + S L+ G+L+
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 237 HQYIECKKVSLNSVELGTALVDM 259
H Y+ K+ L + +A++DM
Sbjct: 275 HGYV-IKQGLLKDKCVISAMIDM 296
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 16/194 (8%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDL------DRFAGNALISAF 54
M+ GV+P+ T P +L P + + GF + + G+ALI +
Sbjct: 379 MQVAGVKPNHVTIPSML-----PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMY 433
Query: 55 ANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
A G I + VF+ K+++ W +L+NG+ + E + F + T D ++
Sbjct: 434 AKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFT 493
Query: 115 SVLRAAAMAGDDNFG-KWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
S+L A G + G K+ + G + +L+ Y S ++++ + G +A + EM
Sbjct: 494 SLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY--SCMVNLLGRAGKLQEAYDLIKEM 551
Query: 173 PYSYRDVVCWSVLV 186
P+ D W L+
Sbjct: 552 PFE-PDSCVWGALL 564
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 2/186 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
LIS +A G + +A ++F E K+ ++WTALI GYV+ + AL F KM + G
Sbjct: 249 TTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ T S L A+A GK +HG+ ++ V+ + V S+L+DMY K G + + +
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMIRTN-VRPNAIVISSLIDMYSKSGSLEASER 367
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF + D V W+ +++ Q A+R+ +M+ V PN TL +L+AC+HS
Sbjct: 368 VF-RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHS 426
Query: 228 GALDQG 233
G +++G
Sbjct: 427 GLVEEG 432
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 33/245 (13%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
++ N ++S + SG + A VFD +D+++W ++ GY ++ EAL + + R +
Sbjct: 114 YSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS 173
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHG-------------------FYVQAGRVQ-- 143
G + + +L A + + HG Y + G+++
Sbjct: 174 GIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESA 233
Query: 144 ---------LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
D ++W+ L+ Y K G + A K+F EMP ++ V W+ L+AGYV+
Sbjct: 234 KRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPE--KNPVSWTALIAGYVRQGS 291
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGT 254
A+ +F M++ V P +FT +S L A A +L GK +H Y+ V N++ + +
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI-S 350
Query: 255 ALVDM 259
+L+DM
Sbjct: 351 SLIDM 355
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 29/138 (21%)
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP----YSY-------- 176
GKW+H G + + + + L+ MY KCG DACKVFD+M YS+
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 177 -----------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
RDVV W+ +V GY Q +A+ + + NEF+
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAG 184
Query: 220 VLSACAHSGALDQGKLVH 237
+L+AC S L + H
Sbjct: 185 LLTACVKSRQLQLNRQAH 202
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 4/209 (1%)
Query: 51 ISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDA 110
+S +A SG A ++FD ++I++W A++ GYV EAL MR +D
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 111 LTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFD 170
+T+V +L + D GK HGF + G + V +AL+DMY KCG A F
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRHG-YDTNVIVANALLDMYGKCGTLQSANIWFR 454
Query: 171 EMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
+M RD V W+ L+ G + + + A+ F M + P+++TL ++L+ CA+ AL
Sbjct: 455 QMS-ELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPAL 512
Query: 231 DQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ GK +H ++ ++ V G A+VDM
Sbjct: 513 NLGKAIHGFLIRDGYKIDVVIRG-AMVDM 540
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 10/218 (4%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F N I A+ G + A ++F+E +D +W A+I +N + E + F +M
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQ---AGRVQLDGYVWSALMDMYFKCGH 161
G + VL++ + D + +H V+ +G V L+ ++++D+Y KC
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLE----TSIVDVYGKCRV 212
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
DA +VFDE+ V W+V+V Y++ +A+ +F+ ML NV P T++SV+
Sbjct: 213 MSDARRVFDEIVNP--SDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVM 270
Query: 222 SACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
AC+ S AL+ GK++H I K + + T++ DM
Sbjct: 271 LACSRSLALEVGKVIHA-IAVKLSVVADTVVSTSVFDM 307
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 5/200 (2%)
Query: 35 IFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSE 93
I++ G+D + NAL+ + G + SA F + S ++D ++W AL+ G + +
Sbjct: 421 IYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQ 480
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
AL F M+ T+ ++L A N GK +HGF ++ G ++D + A++
Sbjct: 481 ALSFFEGMQVEAKP-SKYTLATLLAGCANIPALNLGKAIHGFLIRDG-YKIDVVIRGAMV 538
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY KC D A +VF E + RD++ W+ ++ G + + ++ +F + ++ V P+
Sbjct: 539 DMYSKCRCFDYAIEVFKEA--ATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPD 596
Query: 214 EFTLTSVLSACAHSGALDQG 233
T +L AC G ++ G
Sbjct: 597 HVTFLGILQACIREGHVELG 616
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 122/293 (41%), Gaps = 40/293 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMI---YAQIFKLGFDLDRFAGNALISAFANS 57
M + GV + +F +LK S ++ D ++ + + K G+ + +++ +
Sbjct: 153 MNRDGVRATETSFAGVLK--SCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKC 210
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
+ A +VFDE ++W ++ Y++ EA+ F KM TV SV+
Sbjct: 211 RVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVM 270
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDE------ 171
A + + GK +H V+ V D V +++ DMY KC + A +VFD+
Sbjct: 271 LACSRSLALEVGKVIHAIAVKLS-VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDL 329
Query: 172 -------------------------MPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNML 206
MP R++V W+ ++ GYV +++ +A+ M
Sbjct: 330 KSWTSAMSGYAMSGLTREARELFDLMP--ERNIVSWNAMLGGYVHAHEWDEALDFLTLMR 387
Query: 207 SDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ + TL +L+ C+ + GK H +I N + + AL+DM
Sbjct: 388 QEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVI-VANALLDM 439
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 3 QKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
Q +P ++T LL + P + I+ + + G+ +D A++ ++
Sbjct: 489 QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFD 548
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
A +VF E++ +D+I W ++I G +N E + F+ + + G D +T + +L+A
Sbjct: 549 YAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACI 608
Query: 122 MAGDDNFG 129
G G
Sbjct: 609 REGHVELG 616
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 2/201 (0%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
Q+F++ + D + N +I+ F + + AC +FD K++I+WT +I GYV+N E
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 94 ALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSAL 152
AL F KM R + T VS+L A + G+ +H ++ Q + V SAL
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH-QKNEIVTSAL 372
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
++MY K G A K+FD RD++ W+ ++A Y ++AI ++ M P
Sbjct: 373 LNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKP 432
Query: 213 NEFTLTSVLSACAHSGALDQG 233
+ T ++L AC+H+G +++G
Sbjct: 433 SAVTYLNLLFACSHAGLVEKG 453
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 28/236 (11%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR----- 102
N +I +A SG I A ++FDE ++I++W +++ V+ EA+ F +M
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 103 STGTGVDALT----VVSVLRAAAMAGDDNFGKW---VHGFYVQAGRV-----------QL 144
S VD L V R + N W + G Y Q R+ +
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITG-YAQNNRIDEADQLFQVMPER 262
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
D W+ ++ + + + AC +FD MP ++V+ W+ ++ GYV+ + ++A+ VF
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMP--EKNVISWTTMITGYVENKENEEALNVFSK 320
Query: 205 MLSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
ML D +V PN T S+LSAC+ L +G+ +HQ I K V + + +AL++M
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLI-SKSVHQKNEIVTSALLNM 375
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 16/186 (8%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD 109
LI G I A ++FD +D++ WT +I GY+K EA + F ++ S V
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 110 ALTVVS-VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
+VS LR+ ++ + + + V + W+ ++D Y + G D A ++
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVS---------WNTMIDGYAQSGRIDKALEL 162
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
FDEMP R++V W+ +V VQ + +A+ +F M +VV + T+++ A +G
Sbjct: 163 FDEMP--ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNG 216
Query: 229 ALDQGK 234
+D+ +
Sbjct: 217 KVDEAR 222
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 36/260 (13%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + + GFD D F GN +I+ + I SA +VFDE S +D+++W ++I+GY ++
Sbjct: 154 VHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGS 213
Query: 91 PSEALKCFVKMRS-TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
+ K + M + + + +TV+SV +A + D FG VH ++ +Q+D +
Sbjct: 214 FEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE-NHIQMDLSLC 272
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVV----------------------------- 180
+A++ Y KCG D A +FDEM S +D V
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEM--SEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 181 --CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
W+ +++G +Q N ++ I F M+ PN TL+S+L + +S L GK +H
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 239 YIECKKVSLNSVELGTALVD 258
+ + + N++ + T+++D
Sbjct: 391 F-AIRNGADNNIYVTTSIID 409
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 22/242 (9%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
++A+I D F + LIS + A VFDE +V++ ++ AL+ Y
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 89 DLPSEALKCFVK------MRSTGTGVDALTVVSVLRAAAMAGDDNF-----GKWVHGFYV 137
++ +A F+ S D++++ VL+ A++G D+F + VHGF +
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLK--ALSGCDDFWLGSLARQVHGFVI 159
Query: 138 QAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD 197
+ G D +V + ++ Y KC + + A KVFDEM S RDVV W+ +++GY Q F+D
Sbjct: 160 RGG-FDSDVFVGNGMITYYTKCDNIESARKVFDEM--SERDVVSWNSMISGYSQSGSFED 216
Query: 198 AIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTAL 256
+++ ML+ + PN T+ SV AC S L G VH KK+ N +++ +L
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH-----KKMIENHIQMDLSL 271
Query: 257 VD 258
+
Sbjct: 272 CN 273
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Query: 5 GVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G P+ T LL + ++ I+A + G D + + ++I +A GF+ A
Sbjct: 361 GSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGA 420
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
+VFD + +IAWTA+I Y + A F +M+ GT D +T+ +VL A A +
Sbjct: 421 QRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHS 480
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
GD + + + + ++ ++ ++ + + G DA + +MP
Sbjct: 481 GDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP 530
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 113/202 (55%), Gaps = 5/202 (2%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSV--KDIIAWTALINGYVKNDLP 91
++F+ + + + + ++ ++ +G + A +FD+ + K+++ WT +I GY + L
Sbjct: 237 ELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
EA + +M ++G DA V+S+L A +G + G +H ++ + + YV +A
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSI-LKRSNLGSNAYVLNA 355
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
L+DMY KCG+ A VF+++P +D+V W+ ++ G ++AI +F M + +
Sbjct: 356 LLDMYAKCGNLKKAFDVFNDIP--KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIR 413
Query: 212 PNEFTLTSVLSACAHSGALDQG 233
P++ T +VL +C H+G +D+G
Sbjct: 414 PDKVTFIAVLCSCNHAGLIDEG 435
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 134/265 (50%), Gaps = 19/265 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK----PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M++ G+ D T+P LLK S PVV+ M++ I KLG D + NALI ++
Sbjct: 108 MQRFGLFADNFTYPFLLKACSGQSWLPVVK---MMHNHIEKLGLSSDIYVPNALIDCYSR 164
Query: 57 SGFIG--SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
G +G A ++F++ S +D ++W +++ G VK +A + F +M D ++
Sbjct: 165 CGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWN 220
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
++L A + + F + + + WS ++ Y K G + A +FD+MP
Sbjct: 221 TMLDGYARCREMS-----KAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPL 275
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
++VV W++++AGY + ++A R+ M++ + + + S+L+AC SG L G
Sbjct: 276 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGM 335
Query: 235 LVHQYIECKKVSLNSVELGTALVDM 259
+H ++ + N+ L AL+DM
Sbjct: 336 RIHSILKRSNLGSNAYVL-NALLDM 359
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++AQI + D LISA + A +VF++ ++ +LI + +N
Sbjct: 38 LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQ 97
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P +A F +M+ G D T +L+A + K +H + G + D YV +
Sbjct: 98 PYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG-LSSDIYVPN 156
Query: 151 ALMDMYFKCG--HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
AL+D Y +CG DA K+F++M S RD V W+ ++ G V+ + +DA R+F M
Sbjct: 157 ALIDCYSRCGGLGVRDAMKLFEKM--SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR 214
Query: 209 NVV 211
+++
Sbjct: 215 DLI 217
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 10/211 (4%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
NAL+ +A G + A VF++ KD+++W +++G + EA++ F +MR G
Sbjct: 354 NALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIR 413
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDA 165
D +T ++VL + AG + G + FY L V + L+D+ + G +A
Sbjct: 414 PDKVTFIAVLCSCNHAGLIDEG--IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEA 471
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSAC 224
KV MP +VV W L+ N+ A V N++ D P ++L S + A
Sbjct: 472 IKVVQTMPME-PNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAA 530
Query: 225 AH--SGALD-QGKLVHQYIECKKVSLNSVEL 252
A G D + K+ +E K +SVEL
Sbjct: 531 AEDWEGVADIRSKMKSMGVE-KPSGASSVEL 560
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 113/214 (52%), Gaps = 10/214 (4%)
Query: 32 YAQIFKLGFDLDR--FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
YA LG R + N+L+S + NSG A +F E S D+ W+ ++ Y ++
Sbjct: 488 YAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESC 547
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQA--GRVQLDGY 147
P+EA+ F ++++ G + +T++++L A + + HG+ ++ G ++L G
Sbjct: 548 CPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKG- 606
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
L+D+Y KCG A VF + RD+V ++ +VAGY + ++A+ ++ +M
Sbjct: 607 ---TLLDVYAKCGSLKHAYSVFQS--DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTE 661
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
N+ P+ +T++L+AC H+G + G ++ I
Sbjct: 662 SNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIR 695
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 119/264 (45%), Gaps = 39/264 (14%)
Query: 31 IYAQIFKLGFDL-DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
I++ I + + L D GNALIS +A G +A F S KDII+W A+++ + +
Sbjct: 352 IHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSP 411
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRV--QLDGY 147
+ L + + +D++T++S+L+ K VHG+ V+AG + + +
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPK 471
Query: 148 VWSALMDMYFKCGHC--------------------------------DDACKVFDEMPYS 175
+ +AL+D Y KCG+ DDA +F EM S
Sbjct: 472 LGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM--S 529
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
D+ WS++V Y + +AI VF + + + PN T+ ++L CA +L +
Sbjct: 530 TTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQ 589
Query: 236 VHQYIECKKVSLNSVELGTALVDM 259
H YI + L + L L+D+
Sbjct: 590 CHGYI--IRGGLGDIRLKGTLLDV 611
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 9/215 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ +FKLG ++++ +A + ++F + D + W ++ G +
Sbjct: 43 LHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG-LSVSC 101
Query: 91 PSEALKCFVKMR-STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
E ++ F M + ++T VL GD GK +H + ++AG ++ D V
Sbjct: 102 GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAG-LEKDTLVG 160
Query: 150 SALMDMYFKCGHC-DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL+ MY K G DA FD + + +DVV W+ ++AG+ + N DA R F ML +
Sbjct: 161 NALVSMYAKFGFIFPDAYTAFDGI--ADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKE 218
Query: 209 NVVPNEFTLTSVLSACA---HSGALDQGKLVHQYI 240
PN T+ +VL CA + A G+ +H Y+
Sbjct: 219 PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYV 253
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 7/218 (3%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F N+L+S + G I A +F KD+++W +I GY N +A + F +
Sbjct: 264 FVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHK 323
Query: 105 G-TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD 163
G D++T++S+L A D GK +H + ++ + D V +AL+ Y + G
Sbjct: 324 GDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTS 383
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
A F M S +D++ W+ ++ + K + + ++L++ + + T+ S+L
Sbjct: 384 AAYWAFSLM--STKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKF 441
Query: 224 CAHSGALDQGKLVHQYIECKKVSLNSVE---LGTALVD 258
C + + + K VH Y K L+ E LG AL+D
Sbjct: 442 CINVQGIGKVKEVHGY-SVKAGLLHDEEEPKLGNALLD 478
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD 163
+G G D + V++A A D G+ +HG + G + V ++++MY KC D
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSE-VSKSVLNMYAKCRRMD 73
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGY-VQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVL 221
D K+F +M D V W++++ G V C + + +R F M +D P+ T VL
Sbjct: 74 DCQKMFRQM--DSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVL 129
Query: 222 SACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
C G GK +H YI + +++ +G ALV M
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTL-VGNALVSM 166
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 10/176 (5%)
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR-STGTGVDALTVVSVLRAAAMA 123
+VF E ++ +AWT ++ GY+ E L+ +M G G++ +T+ S+L A A +
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQS 257
Query: 124 GDDNFGKWVHGFYVQAGRVQL------DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
G+ G+WVH + ++ + D V +AL+DMY KCG+ D + VF M R
Sbjct: 258 GNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM--RKR 315
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+VV W+ L +G K + I +F M+ + V P++ T T+VLSAC+HSG +D+G
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEG 370
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 39/253 (15%)
Query: 45 FAGNALISAFANSGFIGSACQVFDES--SVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
+ NAL +A+SG + +A ++FDE S KD + WT L++ + + L ++K FV+MR
Sbjct: 44 YLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR 103
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
+D ++VV + A D F + HG V+ G V V +ALMDMY KCG
Sbjct: 104 RKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMG-VLTSVKVCNALMDMYGKCGLV 162
Query: 163 DDACKVFDEM-----------------------------PYSYRDVVCWSVLVAGYVQCN 193
+ ++F+E+ R+ V W+V+VAGY+
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 194 KFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKV------S 246
++ + + M+ N TL S+LSACA SG L G+ VH Y K++ S
Sbjct: 223 FTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEAS 282
Query: 247 LNSVELGTALVDM 259
+ V +GTALVDM
Sbjct: 283 YDDVMVGTALVDM 295
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+LR A GK +H +G + Y+ +AL Y G A K+FDE+P
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
S +D V W+ L++ + + +++++F M V ++ ++ + CA L +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 235 LVHQYIECKKVSLNSVELGTALVDM 259
H + K L SV++ AL+DM
Sbjct: 132 QGHG-VAVKMGVLTSVKVCNALMDM 155
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 140/285 (49%), Gaps = 32/285 (11%)
Query: 3 QKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
+ GV D+ + L+LK S+ V+ I+ + K G D F N LI + G +G
Sbjct: 114 ENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLG 173
Query: 62 SACQVFDESSVKDIIAWTALINGYVKN----------DLPSEALKCFVKMRSTGTGV--- 108
+ Q+FD +D +++ ++I+GYVK DL +K + S +G
Sbjct: 174 LSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT 233
Query: 109 -DALTVVSVLRAAAMAGD-DNFGKWVHGFYVQAGRVQ-----------LDGYVWSALMDM 155
D + + S L A D ++ + G YV+ GR++ D W+ ++D
Sbjct: 234 SDGVDIASKLFADMPEKDLISWNSMIDG-YVKHGRIEDAKGLFDVMPRRDVVTWATMIDG 292
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNE 214
Y K G A +FD+MP +RDVV ++ ++AGYVQ +A+ +F +M + +++P++
Sbjct: 293 YAKLGFVHHAKTLFDQMP--HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDD 350
Query: 215 FTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
TL VL A A G L + +H YI K+ L +LG AL+DM
Sbjct: 351 TTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGG-KLGVALIDM 394
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTG 107
+I +A GF+ A +FD+ +D++A+ +++ GYV+N EAL+ F M + +
Sbjct: 288 TMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLL 347
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D T+V VL A A G + +H Y+ + L G + AL+DMY KCG A
Sbjct: 348 PDDTTLVIVLPAIAQLGRLSKAIDMH-LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAML 406
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VF+ + + + W+ ++ G + A + + ++ P++ T VL+AC+HS
Sbjct: 407 VFEGI--ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHS 464
Query: 228 GALDQGKLVHQYIECK 243
G + +G L + + K
Sbjct: 465 GLVKEGLLCFELMRRK 480
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 26 EDPFMIYAQIFKLGFDLDRFAGNALISAFANSG---FIGSACQVFDE--------SSVKD 74
+D I+ ++ K G + ++ AFA+S A VF E V+D
Sbjct: 26 DDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVED 85
Query: 75 IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG 134
W A+I + P +AL M G VD ++ VL+A + G G +HG
Sbjct: 86 PFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNK 194
F + G + D ++ + L+ +Y KCG + ++FD MP RD V ++ ++ GYV+C
Sbjct: 146 FLKKTG-LWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMP--KRDSVSYNSMIDGYVKCGL 202
Query: 195 FQDAIRVF 202
A +F
Sbjct: 203 IVSARELF 210
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
++ + K G L N LI+ ++ S + + F++S K W+++I+ + +N
Sbjct: 35 LQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQN 94
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
+LP +L+ KM + D + S ++ A+ + G+ VH ++ G D +V
Sbjct: 95 ELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTG-YDADVFV 153
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
S+L+DMY KCG A K+FDEMP R+VV WS ++ GY Q + ++A+ +F L +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMP--QRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVH 237
N+ N+++ +SV+S CA+S L+ G+ +H
Sbjct: 212 NLAVNDYSFSSVISVCANSTLLELGRQIH 240
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 127/262 (48%), Gaps = 9/262 (3%)
Query: 1 MRQKGVEPDQHTFPLLLK---MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M + PD H P K + S+ + ++ K G+D D F G++L+ +A
Sbjct: 107 MMAGNLRPDDHVLPSATKSCAILSRCDIGRS--VHCLSMKTGYDADVFVGSSLVDMYAKC 164
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G I A ++FDE ++++ W+ ++ GY + EAL F + V+ + SV+
Sbjct: 165 GEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVI 224
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A + G+ +HG +++ S+L+ +Y KCG + A +VF+E+P +
Sbjct: 225 SVCANSTLLELGRQIHGLSIKSSFDSSSFVG-SSLVSLYSKCGVPEGAYQVFNEVP--VK 281
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
++ W+ ++ Y Q + Q I +F M + PN T +VL+AC+H+G +D+G+
Sbjct: 282 NLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYF 341
Query: 238 QYIECKKVSLNSVELGTALVDM 259
++ ++ + LVDM
Sbjct: 342 DQMKESRIEPTDKHYAS-LVDM 362
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD 109
L+S ++ G A QVF+E VK++ W A++ Y ++ + ++ F +M+ +G +
Sbjct: 258 LVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPN 317
Query: 110 ALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVF 169
+T ++VL A + AG + G++ ++ R++ +++L+DM + G +A +V
Sbjct: 318 FITFLNVLNACSHAGLVDEGRYYFD-QMKESRIEPTDKHYASLVDMLGRAGRLQEALEVI 376
Query: 170 DEMPYSYRDVVCWSVLVAGYVQCN 193
MP + V ++L + V N
Sbjct: 377 TNMPIDPTESVWGALLTSCTVHKN 400
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 34/247 (13%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
++F + + D + +I+ FA + +A + FD K +++W A+++GY +N +
Sbjct: 188 KLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTED 247
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
AL+ F M G + T V V+ A + D + + + + RV+L+ +V +AL+
Sbjct: 248 ALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKL-IDEKRVRLNCFVKTALL 306
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-- 211
DM+ KC A ++F+E+ + R++V W+ +++GY + A ++F M NVV
Sbjct: 307 DMHAKCRDIQSARRIFNELG-TQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSW 365
Query: 212 ------------------------------PNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
P+E T+ SVLSAC H L+ G + YI
Sbjct: 366 NSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIR 425
Query: 242 CKKVSLN 248
++ LN
Sbjct: 426 KNQIKLN 432
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 111/210 (52%), Gaps = 5/210 (2%)
Query: 34 QIF-KLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPS 92
+IF +LG + NA+IS + G + SA Q+FD +++++W +LI GY N +
Sbjct: 320 RIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAA 379
Query: 93 EALKCFVKMRSTG-TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSA 151
A++ F M G + D +T++SVL A D G + Y++ +++L+ + +
Sbjct: 380 LAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVD-YIRKNQIKLNDSGYRS 438
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
L+ MY + G+ +A +VFDEM RDVV ++ L + + + + M + +
Sbjct: 439 LIFMYARGGNLWEAKRVFDEM--KERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE 496
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
P+ T TSVL+AC +G L +G+ + + I
Sbjct: 497 PDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 47/255 (18%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
G+ PD +FP+++K + + + A + KLGF D + N ++ + + SA
Sbjct: 101 GIMPDAFSFPVVIKSAGRFGI----LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESAR 156
Query: 65 QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG 124
+VFD+ S + W +I+GY K EA K F M VVS
Sbjct: 157 KVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEND-------VVS--------- 200
Query: 125 DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSV 184
W+ ++ + K ++A K FD MP + VV W+
Sbjct: 201 ------------------------WTVMITGFAKVKDLENARKYFDRMPE--KSVVSWNA 234
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKK 244
+++GY Q +DA+R+F +ML V PNE T V+SAC+ + + + I+ K+
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 245 VSLNSVELGTALVDM 259
V LN + TAL+DM
Sbjct: 295 VRLNCF-VKTALLDM 308
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 7/240 (2%)
Query: 24 VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVK----DIIAWT 79
+++D + ++ K G D N+L S +A G A V + K ++++WT
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 80 ALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQA 139
A+ +G KN ALK F+KM+ G G +A T+ ++L+ + GK VHGF ++
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
+ D YV +AL+DMY K G A ++F + + W+ ++ GY + ++ I
Sbjct: 426 NLI-CDAYVATALVDMYGKSGDLQSAIEIF--WGIKNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
F ML + P+ T TSVLS C +SG + +G + + + ++E + +VD+
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 10/250 (4%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSAC 64
G+E + L+ M+S+ + ++F D + + N+++S++ G++ A
Sbjct: 119 GLESNVSMCNSLIVMYSR---NGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAI 175
Query: 65 QVFDESSV----KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
+ DE + DI+ W +L++GY L +A+ +M+ G ++ S+L+A
Sbjct: 176 GLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
A G GK +HG Y+ ++ D YV + L+DMY K G+ A VFD M +++V
Sbjct: 236 AEPGHLKLGKAIHG-YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM--DAKNIV 292
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
W+ LV+G +DA + M + + P+ T S+ S A G ++ V +
Sbjct: 293 AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM 352
Query: 241 ECKKVSLNSV 250
+ K V+ N V
Sbjct: 353 KEKGVAPNVV 362
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 34/264 (12%)
Query: 29 FMIYAQIFKLGFD-LDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVK 87
I+ + K G D D +A + + +G A ++FDE +D +AW ++ ++
Sbjct: 7 LTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLR 66
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGF------------ 135
+ +A++ F +M+ +G T+V +L+ + G+ +HG+
Sbjct: 67 SGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126
Query: 136 -------YVQAGRVQLDGYV-----------WSALMDMYFKCGHCDDACKVFDEMPYS-- 175
Y + G+++L V W++++ Y K G+ DDA + DEM
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
D+V W+ L++GY +DAI V M + P+ +++S+L A A G L GK
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 236 VHQYIECKKVSLNSVELGTALVDM 259
+H YI ++ + V + T L+DM
Sbjct: 247 IHGYILRNQLWYD-VYVETTLIDM 269
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 40/262 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G++P + LL+ ++P ++ I+ I + D + LI + +G+
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A VFD K+I+AW +L++G L +A ++M G DA+T
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT------- 328
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YR 177
W++L Y G + A V +M
Sbjct: 329 -----------------------------WNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+VV W+ + +G + F++A++VF M + V PN T++++L L GK VH
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 238 QYIECKKVSLNSVELGTALVDM 259
+ K + ++ + TALVDM
Sbjct: 420 GFCLRKNLICDAY-VATALVDM 440
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 128 FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
G +HG ++ G D V SA M Y +C A K+FDEMP RD + W+ +V
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMP--KRDDLAWNEIVM 62
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
++ ++ A+ +F M + T+ +L C++ +G+ +H Y+
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYV 115
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 10/229 (4%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + K G + F +L+ + G I A +VF+ +D++ W AL++ YV N +
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 91 PSEALKCFVKMRSTGTGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
EA M S D T S+L A + GK +H + Q D V
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQ----GKQIHAILFKVS-YQFDIPV 278
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL++MY K H DA + F+ M R+VV W+ ++ G+ Q + ++A+R+F ML +
Sbjct: 279 ATALLNMYAKSNHLSDARECFESMV--VRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE 336
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALV 257
N+ P+E T SVLS+CA A+ + K V Q + KK S + + + +L+
Sbjct: 337 NLQPDELTFASVLSSCAKFSAIWEIKQV-QAMVTKKGSADFLSVANSLI 384
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 7/225 (3%)
Query: 9 DQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD 68
D TF LL S +E I+A +FK+ + D AL++ +A S + A + F+
Sbjct: 244 DYFTFSSLL---SACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFE 300
Query: 69 ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNF 128
V+++++W A+I G+ +N EA++ F +M D LT SVL + A
Sbjct: 301 SMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWE 360
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
K V + G V ++L+ Y + G+ +A F + D+V W+ ++
Sbjct: 361 IKQVQAMVTKKGSADFLS-VANSLISSYSRNGNLSEALLCFHSIREP--DLVSWTSVIGA 417
Query: 189 YVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
++++++F +ML + P++ T VLSAC+H G + +G
Sbjct: 418 LASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEG 461
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 22/242 (9%)
Query: 26 EDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGY 85
E FM+ I+ F N L+ A+ A ++FDE +++I+ W LI+G
Sbjct: 58 EHGFMVKQGIYN-----SLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGV 112
Query: 86 VKNDLPSEALK----CFV-KMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
++ D + C++ ++ T +D ++ + ++R + + G +H V+ G
Sbjct: 113 IQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQG 172
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
++ + ++L+ Y KCG +A +VF+ + RD+V W+ LV+ YV +A
Sbjct: 173 -LESSCFPSTSLVHFYGKCGLIVEARRVFEAVL--DRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 201 VFWNMLSD--NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLN-SVELGTALV 257
+ M SD + FT +S+LSAC ++QGK +H + KVS + + TAL+
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAIL--FKVSYQFDIPVATALL 283
Query: 258 DM 259
+M
Sbjct: 284 NM 285
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 2/174 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + ++PD+ TF +L +K + + + A + K G N+LIS+++ +G
Sbjct: 333 MLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGN 392
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A F D+++WT++I + E+L+ F M D +T + VL A
Sbjct: 393 LSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSA 451
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+ G G + +++ + ++ L+D+ + G D+A V + MP
Sbjct: 452 CSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMP 505
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 126/249 (50%), Gaps = 38/249 (15%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + +ALIS +AN G + + +FD S + +I W ++I+GY+ N++ EAL F +MR
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
+ T D+ T+ +V+ A G GK +H + G + D V S L+DMY KCG
Sbjct: 312 NE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLID-DIVVASTLLDMYSKCGSP 369
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF----------WNMLSDNVVP 212
+ACK+F E+ SY D + + ++ Y C + DA RVF WN +++
Sbjct: 370 MEACKLFSEVE-SY-DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 213 N---------------------EFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE 251
N E +L+SV+SACA +L+ G+ V + V L+S +
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV--FARATIVGLDSDQ 485
Query: 252 -LGTALVDM 259
+ ++L+D+
Sbjct: 486 VVSSSLIDL 494
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 10/221 (4%)
Query: 16 LLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDI 75
LL M+SK P M ++F D N++I + + G I A +VF+ K +
Sbjct: 359 LLDMYSK--CGSP-MEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSL 415
Query: 76 IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGF 135
I+W ++ NG+ +N E L+ F +M D +++ SV+ A A G+ V
Sbjct: 416 ISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV--- 472
Query: 136 YVQAGRVQLDG--YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
+ +A V LD V S+L+D+Y KCG + +VFD M S D V W+ +++GY
Sbjct: 473 FARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKS--DEVPWNSMISGYATNG 530
Query: 194 KFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
+ +AI +F M + P + T VL+AC + G +++G+
Sbjct: 531 QGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGR 571
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 126/256 (49%), Gaps = 37/256 (14%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
+ F + + D ++ N ++S FA +G + A ++F+ KD++ +L++GY+ N E
Sbjct: 114 RFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEE 173
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG------------------- 134
AL+ F ++ + DA+T+ +VL+A A GK +H
Sbjct: 174 ALRLFKELNFSA---DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVN 230
Query: 135 FYVQAGRVQLDGYV-----------WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
Y + G +++ Y+ SAL+ Y CG +++ +FD S R V+ W+
Sbjct: 231 VYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRK--SNRCVILWN 288
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
+++GY+ N +A+ V +N + + + TL +V++AC G L+ GK +H + CK
Sbjct: 289 SMISGYIANNMKMEAL-VLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCH-ACK 346
Query: 244 KVSLNSVELGTALVDM 259
++ + + + L+DM
Sbjct: 347 FGLIDDIVVASTLLDM 362
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A+ +G D D+ ++LI + GF+ +VFD D + W ++I+GY N
Sbjct: 472 VFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQ 531
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG-KWVHGFYVQAGRVQLDGYVW 149
EA+ F KM G +T + VL A G G K V G V D +
Sbjct: 532 GFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVP-DKEHF 590
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYV 190
S ++D+ + G+ ++A + +EMP+ D WS ++ G V
Sbjct: 591 SCMVDLLARAGYVEEAINLVEEMPFDV-DGSMWSSILRGCV 630
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST-GT 106
N +I+ N G A ++ + +++WT +I+GY + D P EA+ F +M +
Sbjct: 193 NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI 252
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
+ +T++++L A GD VH + + G V D V ++L+D Y KCG A
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF 312
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
K F E+P +++V W+ +++ + ++A+ +F +M + PN T+ SVL+AC+H
Sbjct: 313 KFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH 372
Query: 227 SGALDQ 232
G ++
Sbjct: 373 GGLAEE 378
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 10/173 (5%)
Query: 31 IYAQIFKLGF-DLDRFAGNALISAFANSGFIGSACQVFDE--SSVKDIIAWTALINGYVK 87
++A + K GF D N+LI A+A G I SA + F E + K++++WT +I+ +
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAG--DDNFGKWVHGFYVQAGRVQLD 145
+ + EA+ F M G + +T++SVL A + G ++ F ++ + V ++ D
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM-VNEYKITPD 396
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDA 198
+ L+DM + G ++A K+ E+P + VV W +L+ C+ + DA
Sbjct: 397 VKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVV-WRMLLGA---CSVYDDA 445
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 147 YVWSALMDMYFKCGHCDDACKVFDEMP-----------------------------YSYR 177
YV +AL+ MY G+ DA KVFDEMP R
Sbjct: 159 YVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNR 218
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQGKLV 236
VV W+ ++ GY + +K ++AI +F M++ D + PNE T+ ++L A + G L V
Sbjct: 219 TVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSV 278
Query: 237 HQYIECKKVSLNSVELGTALVD 258
H Y+ + + + +L+D
Sbjct: 279 HAYVGKRGFVPCDIRVTNSLID 300
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 11/213 (5%)
Query: 30 MIYAQIFKLGFDLD-RFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVK- 87
+++ + KLGF + G L+ +A +G + A +VFDE + + W A+I GY
Sbjct: 132 IVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSH 191
Query: 88 ----NDLPSEALKCFVKMRSTGTGVDAL--TVVSVLRAAAMAGDDNFGKWVHGFYVQAG- 140
N +A+ F + G+GV T+V VL A + G G VHG+ + G
Sbjct: 192 KDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGF 251
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
++D ++ +AL+DMY KCG ++A VF+ M ++V W+ + G + +
Sbjct: 252 TPEVDVFIGTALVDMYSKCGCLNNAFSVFELM--KVKNVFTWTSMATGLALNGRGNETPN 309
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ M + PNE T TS+LSA H G +++G
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEG 342
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G+ VHG + G + + + L+ Y K G A KVFDEMP R V W+ ++ G
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPE--RTSVTWNAMIGG 187
Query: 189 YV----QCNKFQDAIRVFWNMLS---DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
Y + N V + S V P + T+ VLSA + +G L+ G LVH YIE
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 242 CKKVSLNS---VELGTALVDM 259
K+ V +GTALVDM
Sbjct: 248 --KLGFTPEVDVFIGTALVDM 266
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 7/174 (4%)
Query: 5 GVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGF--DLDRFAGNALISAFANSGFIG 61
GV P T +L S+ ++E +++ I KLGF ++D F G AL+ ++ G +
Sbjct: 215 GVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLN 274
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
+A VF+ VK++ WT++ G N +E +M +G + +T S+L A
Sbjct: 275 NAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYR 334
Query: 122 MAGDDNFGKWVHGFYVQAGRVQLDGYV--WSALMDMYFKCGHCDDACKVFDEMP 173
G G + F R + + + ++D+ K G +A + MP
Sbjct: 335 HIGLVEEG--IELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMP 386
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 38/247 (15%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD---------------- 74
I++ I GFD+ NALIS ++ G + +A ++ ++ KD
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 75 -----------------IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
++AWTA+I GY ++ EA+ F M G ++ T+ ++L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A+ + GK +HG V++G + V +AL+ MY K G+ A + FD + R
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEI-YSVSVSNALITMYAKAGNITSASRAFD-LIRCER 478
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
D V W+ ++ Q ++A+ +F ML + + P+ T V SAC H+G ++QG+
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR--- 535
Query: 238 QYIECKK 244
QY + K
Sbjct: 536 QYFDMMK 542
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 118/245 (48%), Gaps = 32/245 (13%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F+ N ++SA++ G + S C+ FD+ +D ++WT +I GY +A++ M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G T+ +VL + A GK VH F V+ G ++ + V ++L++MY KCG
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG-LRGNVSVSNSLLNMYAKCGDPMM 199
Query: 165 ACKVFDEM-----------------------------PYSYRDVVCWSVLVAGYVQCNKF 195
A VFD M + RD+V W+ +++G+ Q
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 196 QDAIRVFWNMLSDNVV-PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGT 254
A+ +F ML D+++ P+ FTL SVLSACA+ L GK +H +I ++ + L
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL-N 318
Query: 255 ALVDM 259
AL+ M
Sbjct: 319 ALISM 323
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 123/276 (44%), Gaps = 37/276 (13%)
Query: 16 LLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDI 75
LL M++K DP M+ +F D + NA+I+ G + A F++ + +DI
Sbjct: 187 LLNMYAK--CGDP-MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 76 IAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG 134
+ W ++I+G+ + AL F KM R + D T+ SVL A A GK +H
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 135 FYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDE----------------------- 171
V G + G V +AL+ MY +CG + A ++ ++
Sbjct: 304 HIVTTG-FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 172 --------MPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
+ RDVV W+ ++ GY Q + +AI +F +M+ PN +TL ++LS
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 224 CAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ +L GK +H K + SV + AL+ M
Sbjct: 423 ASSLASLSHGKQIHGS-AVKSGEIYSVSVSNALITM 457
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 48 NALISAFANSGFIGSACQVFDE-SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
NALI+ +A +G I SA + FD +D ++WT++I ++ EAL+ F M G
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D +T V V A AG N G+ ++ ++ ++D++ + G +A
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 167 KVFDEMPYSYRDVVCWSVLVAG 188
+ ++MP DVV W L++
Sbjct: 572 EFIEKMPIE-PDVVTWGSLLSA 592
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 118/219 (53%), Gaps = 5/219 (2%)
Query: 42 LDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM 101
L + + N++I A G A +VF + K+I+ WT +I GY +N +AL+ FV+M
Sbjct: 269 LTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM 328
Query: 102 RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
+G D +VL A + GK +HG + G Q YV +AL+++Y KCG
Sbjct: 329 MKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCG-FQGYAYVGNALVNLYAKCGD 387
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
+A + F ++ + +D+V W+ ++ + A++++ NM++ + P+ T +L
Sbjct: 388 IKEADRAFGDI--ANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLL 445
Query: 222 SACAHSGALDQGKLVHQ-YIECKKVSLNSVELGTALVDM 259
+ C+HSG +++G ++ + ++ ++ L V+ T ++DM
Sbjct: 446 TTCSHSGLVEEGCMIFESMVKDYRIPLE-VDHVTCMIDM 483
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 51 ISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDA 110
I++ A SG I SA QVFD D +AW ++ Y + L EA+ F ++R + D
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 111 LTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFD 170
+ ++L A G+ FG+ + +++G V ++L+DMY KC A KVF
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCA-SLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 171 EMPYSYRDVV-------------------------------CWSVLVAGYVQCNKFQDAI 199
+M R+ V W+++++G+ C K + +
Sbjct: 130 DMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCL 189
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSAC-AHSGALDQGKLVH 237
+F ML P+ +T +S+++AC A S + G++VH
Sbjct: 190 SLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV+ D + +L S ++ MI+ + GF + GNAL++ +A G
Sbjct: 328 MMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGD 387
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A + F + + KD+++W ++ + + L +ALK + M ++G D +T + +L
Sbjct: 388 IKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTT 447
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
+ +G G + V+ R+ L+ + ++DM+ + GH +A
Sbjct: 448 CSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA 493
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 158 KCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTL 217
K G A +VFD MP D V W+ ++ Y + Q+AI +F + + P++++
Sbjct: 16 KSGRIASARQVFDGMPE--LDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSF 73
Query: 218 TSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
T++LS CA G + G+ + Q + + S+ + +L+DM
Sbjct: 74 TAILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDM 114
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 12/229 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS------KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAF 54
+ + + P+ T + L+ + K VE + + K G D + +L++ +
Sbjct: 39 LLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQ---VQTHLTKSGLDRFVYVKTSLLNLY 95
Query: 55 ANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
G + SA +FDE +D + W ALI GY +N +A K F+ M G A T+V
Sbjct: 96 LKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLV 155
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
++L G + G+ VHG ++G ++LD V +AL+ Y KC A +F EM
Sbjct: 156 NLLPFCGQCGFVSQGRSVHGVAAKSG-LELDSQVKNALISFYSKCAELGSAEVLFREMK- 213
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
+ V W+ ++ Y Q ++AI VF NM NV + T+ ++LSA
Sbjct: 214 -DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 4/206 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ K G N LI+ ++ + + +F++ +I+W ++I+G V++
Sbjct: 369 LHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGR 428
Query: 91 PSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW 149
S A + F +M TG + DA+T+ S+L + N GK +HG+ ++ + + +V
Sbjct: 429 ASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLR-NNFENENFVC 487
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+AL+DMY KCG+ A VF + W+ +++GY A+ + M
Sbjct: 488 TALIDMYAKCGNEVQAESVFKSIKAPC--TATWNSMISGYSLSGLQHRALSCYLEMREKG 545
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKL 235
+ P+E T VLSAC H G +D+GK+
Sbjct: 546 LKPDEITFLGVLSACNHGGFVDEGKI 571
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 124/260 (47%), Gaps = 10/260 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M +K VE T ++ + S V +P ++ + K G D +L+ A++ G +
Sbjct: 243 MFEKNVEISPVT---IINLLSAHVSHEP--LHCLVVKCGMVNDISVVTSLVCAYSRCGCL 297
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
SA +++ + I+ T++++ Y + A+ F K R +DA+ +V +L
Sbjct: 298 VSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGC 357
Query: 121 AMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
+ + G +HG+ +++G V + L+ MY K + +F+++ + ++
Sbjct: 358 KKSSHIDIGMSLHGYAIKSGLCT-KTLVVNGLITMYSKFDDVETVLFLFEQLQET--PLI 414
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWN-MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
W+ +++G VQ + A VF ML+ ++P+ T+ S+L+ C+ L+ GK +H Y
Sbjct: 415 SWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGY 474
Query: 240 IECKKVSLNSVELGTALVDM 259
N + TAL+DM
Sbjct: 475 TLRNNFE-NENFVCTALIDM 493
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 3/188 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N +I F +SG + +F + S + I++W ++I+ K EAL+ F +M G
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD 231
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D TVV+VL +A G + GKW+H +G + V +AL+D Y K G + A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAH 226
+F +M R+VV W+ L++G K + I +F M+ + V PNE T VL+ C++
Sbjct: 292 IFRKM--QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSY 349
Query: 227 SGALDQGK 234
+G +++G+
Sbjct: 350 TGQVERGE 357
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 33/239 (13%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
++ + +NS + A +VF +++ + A+I Y P E+L F M+S G
Sbjct: 44 SICGSLSNSDY---ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWA 100
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
D T +L++ + D FGK VHG ++ G +L G + ++++Y G DA KV
Sbjct: 101 DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRL-GKIRIGVVELYTSGGRMGDAQKV 159
Query: 169 FDEMP-----------------------------YSYRDVVCWSVLVAGYVQCNKFQDAI 199
FDEM S R +V W+ +++ +C + ++A+
Sbjct: 160 FDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREAL 219
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
+F M+ P+E T+ +VL A G LD GK +H E + + + +G ALVD
Sbjct: 220 ELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 3/190 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFA-GNALISAFANSG 58
M +G +PD+ T +L + S V++ I++ G D GNAL+ + SG
Sbjct: 225 MIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG-TGVDALTVVSVL 117
+ +A +F + +++++W LI+G N + F M G + T + VL
Sbjct: 285 DLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ G G+ + G ++ +++ + A++D+ + G +A K MP +
Sbjct: 345 ACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNAN 404
Query: 178 DVVCWSVLVA 187
+ S+L A
Sbjct: 405 AAMWGSLLSA 414
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 35/261 (13%)
Query: 6 VEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS-- 62
++PD +T L++ + + E ++ + GFD D LIS +A G + S
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 63 -------------------AC----------QVFDESSVKDIIAWTALINGYVKNDLPSE 93
AC ++F+ +D IAW A+I+GY + E
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
AL F M+ G V+ + ++SVL A G + G+W H Y++ ++++ + + L+
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHS-YIERNKIKITVRLATTLV 282
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
D+Y KCG + A +VF M ++V WS + G + + +F M D V PN
Sbjct: 283 DLYAKCGDMEKAMEVFWGM--EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPN 340
Query: 214 EFTLTSVLSACAHSGALDQGK 234
T SVL C+ G +D+G+
Sbjct: 341 AVTFVSVLRGCSVVGFVDEGQ 361
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 33/238 (13%)
Query: 53 AFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV--DA 110
A ++ ++ A Q+ D S + A ++I + K+ +P ++ + ++ S+G + D
Sbjct: 49 ALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDN 108
Query: 111 LTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFD 170
TV +++A G VHG ++ G D +V + L+ +Y + G D KVF+
Sbjct: 109 YTVNFLVQACTGLRMRETGLQVHGMTIRRG-FDNDPHVQTGLISLYAELGCLDSCHKVFN 167
Query: 171 EMP-----------------------------YSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
+P RD + W+ +++GY Q + ++A+ V
Sbjct: 168 SIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNV 227
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
F M + V N + SVLSAC GALDQG+ H YIE K+ + +V L T LVD+
Sbjct: 228 FHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKI-TVRLATTLVDL 284
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 47 GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
L+ +A G + A +VF K++ W++ +NG N + L+ F M+ G
Sbjct: 278 ATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGV 337
Query: 107 GVDALTVVSVLRAAAMAG-----DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
+A+T VSVLR ++ G +F + F ++ QL+ Y L+D+Y + G
Sbjct: 338 TPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEP---QLEHY--GCLVDLYARAGR 392
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLV 186
+DA + +MP V WS L+
Sbjct: 393 LEDAVSIIQQMPMKPHAAV-WSSLL 416
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 107/205 (52%), Gaps = 3/205 (1%)
Query: 29 FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
+++++ + GF+ + A ALI+ + G + A +VFD++ ++I T +++ Y ++
Sbjct: 257 LQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQD 316
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
EAL F KM + + T +L + A G +HG +++G + V
Sbjct: 317 KSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG-YRNHVMV 375
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+AL++MY K G +DA K F M ++RD+V W+ +++G ++A+ F M+
Sbjct: 376 GNALVNMYAKSGSIEDARKAFSGM--TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFT 433
Query: 209 NVVPNEFTLTSVLSACAHSGALDQG 233
+PN T VL AC+H G ++QG
Sbjct: 434 GEIPNRITFIGVLQACSHIGFVEQG 458
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 4/235 (1%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
+E+ + K G F N L+ ++ G A +V D+ D+ +++ ++G
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 85 YVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL 144
Y++ E L K + + LT +S LR + D N VH V+ G
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFG-FNA 270
Query: 145 DGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWN 204
+ AL++MY KCG A +VFD+ +++ + ++ Y Q F++A+ +F
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDT--HAQNIFLNTTIMDAYFQDKSFEEALNLFSK 328
Query: 205 MLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
M + V PNE+T +L++ A L QG L+H + K N V +G ALV+M
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLV-LKSGYRNHVMVGNALVNM 382
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 3/195 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M K V P+++TF +LL ++ +++ +++ + K G+ GNAL++ +A SG
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A + F + +DI+ W +I+G + L EAL+ F +M TG + +T + VL+A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQA 448
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ G G ++ VQ D ++ ++ + K G DA P + DV
Sbjct: 449 CSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEW-DV 507
Query: 180 VCWSVLV-AGYVQCN 193
V W L+ A YV+ N
Sbjct: 508 VAWRTLLNACYVRRN 522
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 7/219 (3%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D + N+LI+ + A ++FD +++++W A++ GY + E LK F M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 103 STG-TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
+G + + V ++ + +G GK HG +++ G + + +V + L+ MY C
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHE-FVRNTLVYMYSLCSG 186
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
+A +V D++PY D+ +S ++GY++C F++ + V +++ V N T S L
Sbjct: 187 NGEAIRVLDDLPYC--DLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSL 244
Query: 222 SACAHSGALDQGKLVHQYIECKKVSLNS-VELGTALVDM 259
++ L+ VH + + N+ VE AL++M
Sbjct: 245 RLFSNLRDLNLALQVHSRM--VRFGFNAEVEACGALINM 281
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 10/240 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF----MIYAQIFKLGFDLDRFAGNALISAFAN 56
+R PD++TF + ++P + F +++ Q+ KLG++ F G L+S +
Sbjct: 393 LRMSTPRPDEYTFSAAISATAEP---ERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFK 449
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
+ SA +VFD +D++ WT +I G+ + A++ F++M D ++ SV
Sbjct: 450 NREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSV 509
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
+ A + G+ H ++ G V AL+DMY K G + A +F S
Sbjct: 510 IGACSDMAMLRQGEVFHCLAIRTG-FDCVMSVCGALVDMYGKNGKYETAETIFSLA--SN 566
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
D+ CW+ ++ Y Q + A+ F +L + +P+ T S+L+AC+H G+ QGK +
Sbjct: 567 PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFL 626
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 112/216 (51%), Gaps = 5/216 (2%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN-DLPSEALKCFVKMRS 103
+A N LIS + G + A +VFD+ ++++++ AL + Y +N D S A M
Sbjct: 133 YANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAF 192
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD 163
++ T S+++ A+ D G ++ ++ G + V ++++ MY CG +
Sbjct: 193 EYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSD-NVVVQTSVLGMYSSCGDLE 251
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
A ++FD + + RD V W+ ++ G ++ +K +D + F NML V P +FT + VL+
Sbjct: 252 SARRIFDCV--NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNG 309
Query: 224 CAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
C+ G+ GKL+H I SL + L AL+DM
Sbjct: 310 CSKLGSYSLGKLIHARIIVSD-SLADLPLDNALLDM 344
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 130/258 (50%), Gaps = 10/258 (3%)
Query: 6 VEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
V+P+ TF L+++ + V+ED M + +QI KLG+ + +++ +++ G + S
Sbjct: 195 VKPNSSTFTSLVQVCA--VLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLES 252
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
A ++FD + +D +AW +I G +KND + L F M +G T VL +
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
G + GK +H + + + D + +AL+DMY CG +A VF + ++V W
Sbjct: 313 LGSYSLGKLIHARIIVSDSLA-DLPLDNALLDMYCSCGDMREAFYVFGRIHNP--NLVSW 369
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
+ +++G + + A+ ++ +L P+E+T ++ +SA A GKL+H +
Sbjct: 370 NSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV- 428
Query: 242 CKKVSLNSVELGTALVDM 259
K SV +GT L+ M
Sbjct: 429 TKLGYERSVFVGTTLLSM 446
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 5/239 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M GV+P Q T+ ++L SK +I+A+I D NAL+ + + G
Sbjct: 291 MLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD 350
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGTGVDALTVVSVLR 118
+ A VF ++++W ++I+G +N +A+ + ++ R + D T + +
Sbjct: 351 MREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
A A GK +HG + G + +V + L+ MYFK + A KVFD M RD
Sbjct: 411 ATAEPERFVHGKLLHGQVTKLG-YERSVFVGTTLLSMYFKNREAESAQKVFDVM--KERD 467
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
VV W+ ++ G+ + + A++ F M + + F+L+SV+ AC+ L QG++ H
Sbjct: 468 VVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFH 526
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 29/199 (14%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTAL--INGYVK--NDLPSEALKC--- 97
+A N LIS + + A +VFD+ ++I+ L + YV + L S+ +K
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 98 ----FVKMRSTGTGVDALT----VVSVLRAAAMAGDDNFGKWVHGFYVQAGR--VQLDGY 147
F+ + + V LT ++VL+ A + +H + AG Y
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRA---------RQIHALVLTAGAGAATESPY 133
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD-AIRVFWNML 206
+ L+ MY +CG + A KVFD+MP +R+VV ++ L + Y + F A + +M
Sbjct: 134 ANNNLISMYVRCGSLEQARKVFDKMP--HRNVVSYNALYSAYSRNPDFASYAFPLTTHMA 191
Query: 207 SDNVVPNEFTLTSVLSACA 225
+ V PN T TS++ CA
Sbjct: 192 FEYVKPNSSTFTSLVQVCA 210
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
+ GFD AL+ + +G +A +F +S D+ W +++ Y ++ + +AL
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
F ++ G DA+T +S+L A + G GK++ + G ++ +S ++++
Sbjct: 590 SFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQG-IKAGFKHYSCMVNL 648
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQ 196
K G D+A ++ ++ P W L++ V Q
Sbjct: 649 VSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQ 689
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 129/263 (49%), Gaps = 34/263 (12%)
Query: 5 GVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G+ P++ TF ++ + V+ ++ K+G + F G+A+++ + + A
Sbjct: 88 GIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDA 147
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM--RS-------------TGTGV 108
+ FD++ ++++ T LI+GY+K EAL F M RS TG
Sbjct: 148 RRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNE 207
Query: 109 DAL-TVVSVLRAAAMAGDDNF----------------GKWVHGFYVQAGRVQLDGYVWSA 151
+A+ T V +LR + +++ GK +H ++ + + +VW++
Sbjct: 208 EAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNS 267
Query: 152 LMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NV 210
L+ Y KCG+ +D+ F+++ R++V W+ ++ GY + ++A+ +F M+ D N+
Sbjct: 268 LISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNL 327
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
PN T+ VL AC H+G + +G
Sbjct: 328 RPNNVTILGVLFACNHAGLIQEG 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 45/234 (19%)
Query: 46 AGNALISAFANS----------GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
+ NAL++ NS I +A +VFDE D+I+ TA+I +VK EA
Sbjct: 19 SANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEAS 78
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
+ F ++ G + T +V+ ++ + D GK +H + ++ G + + +V SA+++
Sbjct: 79 QAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMG-LASNVFVGSAVLNC 137
Query: 156 YFKCGHCDDACKVFDE-------------------------------MPYSYRDVVCWSV 184
Y K DA + FD+ MP R VV W+
Sbjct: 138 YVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP--ERSVVTWNA 195
Query: 185 LVAGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTLTSVLSACAHSGALDQGKLVH 237
++ G+ Q + ++A+ F +ML + VV PNE T ++A ++ + GK +H
Sbjct: 196 VIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIH 249
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 102/187 (54%), Gaps = 5/187 (2%)
Query: 49 ALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM--RSTGT 106
+IS + G + SA ++F S KD + + A+I Y +N P +ALK F +M R++
Sbjct: 268 TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYI 327
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D +T+ SV+ A + G+ +FG WV + + G +++D + ++L+D+Y K G A
Sbjct: 328 QPDEITLSSVVSANSQLGNTSFGTWVESYITEHG-IKIDDLLSTSLIDLYMKGGDFAKAF 386
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
K+F + + +D V +S ++ G +A +F M+ + PN T T +LSA +H
Sbjct: 387 KMFSNL--NKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSH 444
Query: 227 SGALDQG 233
SG + +G
Sbjct: 445 SGLVQEG 451
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ P H +L+ K + D I+AQ K G + L+ ++ G+
Sbjct: 95 MHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGY 154
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
I A + FD+ + K+ ++W +L++GY+++ EA + F K+ DA++ ++ +
Sbjct: 155 IELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISS 210
Query: 120 AAMAGD-------------DNFGKW--VHGFYVQAGRVQL-----------DGYVWSALM 153
A GD + W + G YV ++L +G W ++
Sbjct: 211 YAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMI 270
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN--VV 211
Y K G A ++F M S +D + + ++A Y Q K +DA+++F ML N +
Sbjct: 271 SGYTKLGDVQSAEELFRLM--SKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQ 328
Query: 212 PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
P+E TL+SV+SA + G G V YI + ++ + L T+L+D+
Sbjct: 329 PDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDL-LSTSLIDL 375
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
D +W L+ ++ E + ++ M ++G + V SVLRA + GK +H
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 134 GFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQ 191
QA + L G YV + L+ +Y + G+ + A K FD++ + ++ V W+ L+ GY++
Sbjct: 128 A---QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDI--AEKNTVSWNSLLHGYLE 182
Query: 192 CNKFQDAIRVF----------WNMLSDNVVP--NEFTLTSVLSACAHSGALDQGKLVHQY 239
+ +A RVF WN++ + + S+ SA L+ Y
Sbjct: 183 SGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGY 242
Query: 240 IECKKVSL 247
+ C+++ L
Sbjct: 243 VNCREMKL 250
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 115/239 (48%), Gaps = 10/239 (4%)
Query: 8 PDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
PD T+P ++K + V ++ + K G D F GNAL+S + GF+ A Q+
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQL 244
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVK-MRSTGTGV---DALTVVSVLRAAAM 122
FD +++++W ++I + N E+ + M G G D T+V+VL A
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
+ GK VHG+ V+ R+ + + +ALMDMY KCG +A +F + ++VV W
Sbjct: 305 EREIGLGKGVHGWAVKL-RLDKELVLNNALMDMYSKCGCITNAQMIFK--MNNNKNVVSW 361
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLS--DNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+ +V G+ V ML+ ++V +E T+ + + C H L K +H Y
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 4/234 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ PD T LL SK + ++ I + + D F +++S + + G
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ + +FD K +++W +I GY++N P AL F +M G + ++++ V A
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
++ G+ H + ++ ++ D ++ +L+DMY K G + KVF+ + +
Sbjct: 607 CSLLPSLRLGREAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGL--KEKST 663
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
W+ ++ GY ++AI++F M P++ T VL+AC HSG + +G
Sbjct: 664 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 717
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 6/225 (2%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
K F + NA ++++A G + A +VF K + +W ALI G+ +++ P +L
Sbjct: 422 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSL 481
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
++M+ +G D+ TV S+L A + GK VHGF ++ ++ D +V+ +++ +
Sbjct: 482 DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-NWLERDLFVYLSVLSL 540
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQD-AIRVFWNMLSDNVVPNE 214
Y CG +FD M + +V W+ ++ GY+Q N F D A+ VF M+ +
Sbjct: 541 YIHCGELCTVQALFDAM--EDKSLVSWNTVITGYLQ-NGFPDRALGVFRQMVLYGIQLCG 597
Query: 215 FTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
++ V AC+ +L G+ H Y K + + + +L+DM
Sbjct: 598 ISMMPVFGACSLLPSLRLGREAHAY-ALKHLLEDDAFIACSLIDM 641
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 11/216 (5%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV- 108
+I+ +A G + VFD K++ W A+I+ Y +N+L E L+ F++M ST +
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKV 168
D T V++A A D G VHG V+ G V+ D +V +AL+ Y G DA ++
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNALVSFYGTHGFVTDALQL 244
Query: 169 FDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN----VVPNEFTLTSVLSAC 224
FD MP R++V W+ ++ + +++ + M+ +N +P+ TL +VL C
Sbjct: 245 FDIMP--ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 225 AHSGALDQGKLVHQYIECKKVSLN-SVELGTALVDM 259
A + GK VH + K+ L+ + L AL+DM
Sbjct: 303 AREREIGLGKGVHGW--AVKLRLDKELVLNNALMDM 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
+A K + D F +LI +A +G I + +VF+ K +W A+I GY + L
Sbjct: 620 HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 92 SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG-KWVHGFYVQAG-RVQLDGYVW 149
EA+K F +M+ TG D LT + VL A +G + G +++ G + L Y
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY-- 737
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
+ ++DM + G D A +V E DV W L++
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+L+A+ D G+ +H + R++ D + + ++ MY CG DD+ VFD +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL--R 147
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS-DNVVPNEFTLTSVLSACAHSGALDQGK 234
+++ W+ +++ Y + + + + F M+S +++P+ FT V+ ACA + G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 235 LVHQYIECKKVSLNSVELGTALV 257
VH + K + V +G ALV
Sbjct: 208 AVHGLV-VKTGLVEDVFVGNALV 229
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 44/267 (16%)
Query: 7 EPDQHTFPLLLKMFSKPVVEDPF---MIYAQIFKLGFDL--------------------- 42
P+ +PL+LK S P + F +++ +FK GF L
Sbjct: 123 RPNHFIYPLVLK--STPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITL 180
Query: 43 -----------DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLP 91
+ + A++S +A SG I +A +F++ +D+ +W A++ +N L
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 92 SEALKCFVKM-RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA+ F +M + +TVV VL A A G K +H F + + D +V +
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD-LSSDVFVSN 299
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN- 209
+L+D+Y KCG+ ++A VF S + + W+ ++ + + ++AI VF M+ N
Sbjct: 300 SLVDLYGKCGNLEEASSVFKMA--SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNI 357
Query: 210 --VVPNEFTLTSVLSACAHSGALDQGK 234
+ P+ T +L+AC H G + +G+
Sbjct: 358 NDIKPDHITFIGLLNACTHGGLVSKGR 384
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
W+A++ Y + G +A +F++MP RDV W+ ++A Q F +A+ +F M+++
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPE--RDVPSWNAILAACTQNGLFLEAVSLFRRMINE 253
Query: 209 -NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
++ PNE T+ VLSACA +G L K +H + + +S + V + +LVD+
Sbjct: 254 PSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLS-SDVFVSNSLVDL 304
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+A ++ D F N+L+ + G + A VF +S K + AW ++IN + +
Sbjct: 282 IHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGR 341
Query: 91 PSEALKCF---VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY-VQAGRVQLDG 146
EA+ F +K+ D +T + +L A G + G+ G++ + R ++
Sbjct: 342 SEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGR---GYFDLMTNRFGIEP 398
Query: 147 YV--WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVA 187
+ + L+D+ + G D+A +V M + + S+L A
Sbjct: 399 RIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 7/207 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+Y ++ K + + N LI+ + +G + +A +VFDE + + W A+I G ++ +
Sbjct: 16 VYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 71
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E L F +M G D T+ SV +A + G+ +HG+ ++ G ++LD V S
Sbjct: 72 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG-LELDLVVNS 130
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+L MY + G D V MP R++V W+ L+ G Q + + ++ M
Sbjct: 131 SLAHMYMRNGKLQDGEIVIRSMP--VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC 188
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVH 237
PN+ T +VLS+C+ QG+ +H
Sbjct: 189 RPNKITFVTVLSSCSDLAIRGQGQQIH 215
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 109/238 (45%), Gaps = 11/238 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQI----FKLGFDLDRFAGNALISAFAN 56
M G PD++T L +FS I QI K G +LD ++L +
Sbjct: 82 MHGLGFSPDEYT---LGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMR 138
Query: 57 SGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSV 116
+G + V V++++AW LI G +N P L + M+ +G + +T V+V
Sbjct: 139 NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTV 198
Query: 117 LRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
L + + G+ +H ++ G + V S+L+ MY KCG DA K F E
Sbjct: 199 LSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV-SSLISMYSKCGCLGDAAKAFSER--ED 255
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD-NVVPNEFTLTSVLSACAHSGALDQG 233
D V WS +++ Y + +AI +F M N+ NE ++L AC+HSG D+G
Sbjct: 256 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 313
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 121/236 (51%), Gaps = 6/236 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + ++PD+ T ++L ++ +E I+ + + + + LI+ ++
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 60 IGSACQVFDES-SVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV-DALTVVSVL 117
+ + +FD+ + DI W ++I+G+ N L ++AL F +M T + + +VL
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ + G+ HG V++G V D +V +AL DMY KCG D A + FD + +
Sbjct: 527 SSCSRLCSLLHGRQFHGLVVKSGYVS-DSFVETALTDMYCKCGEIDSARQFFDAVLR--K 583
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ V W+ ++ GY + +A+ ++ M+S P+ T SVL+AC+HSG ++ G
Sbjct: 584 NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG 639
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 125/254 (49%), Gaps = 16/254 (6%)
Query: 5 GVEPDQHTFPLLLKMFSKPVVEDPFMI--YAQIFKLGFDLDRFAGNALISAFANSGFI-G 61
G P + T +L SK V++ F + + K G D + F GNAL+S +A GFI
Sbjct: 133 GFLPSRFTLASVLSACSK-VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD 191
Query: 62 SACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR-AA 120
+VF+ S + +++TA+I G + + EA++ F M G VD++ + ++L +A
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Query: 121 AMAGDDN--------FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
G D+ GK +H ++ G D ++ ++L+++Y K + A +F EM
Sbjct: 252 PREGCDSLSEIYGNELGKQIHCLALRLG-FGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 173 PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
P +VV W++++ G+ Q + ++ M PNE T SVL AC SG ++
Sbjct: 311 PEV--NVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVET 368
Query: 233 GKLVHQYIECKKVS 246
G+ + I VS
Sbjct: 369 GRRIFSSIPQPSVS 382
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 9/211 (4%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D ++ NA ++ G +G AC+VFD +D+++W +I+ V+ +AL + +M
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH- 161
G T+ SVL A + D FG HG V+ G + + +V +AL+ MY KCG
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTG-LDKNIFVGNALLSMYAKCGFI 189
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
D +VF+ + S + V ++ ++ G + NK +A+++F M V + L+++L
Sbjct: 190 VDYGVRVFESL--SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Query: 222 SACAHSGALDQ-----GKLVHQYIECKKVSL 247
S A D G + + I C + L
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRL 278
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 38/219 (17%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ +LGF D N+L+ +A + + A +F E ++++W +I G+ +
Sbjct: 271 IHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYR 330
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
++++ +MR +G + +T +SVL A +GD V+ GR
Sbjct: 331 SDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGD-----------VETGR--------- 370
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
++F +P V W+ +++GY +++AI F M N+
Sbjct: 371 ----------------RIFSSIPQP--SVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS 249
P++ TL+ +LS+CA L+ GK +H + ++S NS
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS 451
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCF 98
GF + +++ A SG + + ++F + AW A+++GY + EA+ F
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 99 VKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFK 158
+M+ D T+ +L + A GK +HG ++ + + ++ S L+ +Y +
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT-EISKNSHIVSGLIAVYSE 463
Query: 159 CGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTL 217
C + + +FD+ + D+ CW+ +++G+ A+ +F M V+ PNE +
Sbjct: 464 CEKMEISECIFDDC-INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSF 522
Query: 218 TSVLSACAHSGALDQGKLVHQY-IECKKVSLNSVELGTALVDM 259
+VLS+C+ +L G+ H ++ VS + VE TAL DM
Sbjct: 523 ATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVE--TALTDM 563
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 8 PDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
P++ +F +L S+ + + + K G+ D F AL + G I SA Q
Sbjct: 517 PNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQF 576
Query: 67 FDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD 126
FD K+ + W +I+GY N EA+ + KM S+G D +T VSVL A + +G
Sbjct: 577 FDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLV 636
Query: 127 NFG-------KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
G + +HG +LD Y+ ++D + G +DA K+ + PY V
Sbjct: 637 ETGLEILSSMQRIHGI-----EPELDHYI--CIVDCLGRAGRLEDAEKLAEATPYKSSSV 689
Query: 180 VCWSVLVA 187
+ W +L++
Sbjct: 690 L-WEILLS 696
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 30/126 (23%)
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP----YSY-------- 176
GK +HGF V+ G ++ D Y+ + L+D+Y +CG D A KVFDEM YS+
Sbjct: 25 GKVIHGFIVRMG-MKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 177 -----------------RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
RDVV W+ +++ V+ + A+ V+ M+ D +P+ FTL S
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 220 VLSACA 225
VLSAC+
Sbjct: 144 VLSACS 149
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 46 AGNALISAFANSGFIGSACQVFDESSV-KDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
A A+I+ + + + A +F + +V K+++ W A+I+GYV+N P + LK F M
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G ++ + S L + G+ +H V + D ++L+ MY KCG D
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQI-VSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A K+F+ M +DVV W+ +++GY Q A+ +F M+ + + P+ T +VL AC
Sbjct: 338 AWKLFEVM--KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLAC 395
Query: 225 AHSGALDQG 233
H+G ++ G
Sbjct: 396 NHAGLVNIG 404
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 15/239 (6%)
Query: 24 VVEDP--FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTAL 81
+ +DP M Q+F + D F+ N ++S + + A FD KD +W +
Sbjct: 102 ISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTM 161
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
I GY + +A + F M + ++ +++ GD K H F V R
Sbjct: 162 ITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGD--LEKASHFFKVAPVR 215
Query: 142 VQLDGYV-WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
G V W+A++ Y K + A +F +M + +++V W+ +++GYV+ ++ +D ++
Sbjct: 216 ----GVVAWTAMITGYMKAKKVELAEAMFKDMTVN-KNLVTWNAMISGYVENSRPEDGLK 270
Query: 201 VFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+F ML + + PN L+S L C+ AL G+ +HQ + K N V T+L+ M
Sbjct: 271 LFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS-KSTLCNDVTALTSLISM 328
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 33/202 (16%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D A +LIS + G +G A ++F+ KD++AW A+I+GY ++ +AL F +M
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 377
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
D +T V+VL A AG N G V+ +V+ ++ ++D+ + G
Sbjct: 378 DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL 437
Query: 163 DDACKVFDEMPYSYRDVVCWSVL--------------------------VAGYVQC---- 192
++A K+ MP+ V ++L AGYVQ
Sbjct: 438 EEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIY 497
Query: 193 ---NKFQDAIRVFWNMLSDNVV 211
N+++D RV M NVV
Sbjct: 498 ASKNRWEDVARVRKRMKESNVV 519
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 3/203 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+AQI K +D+ N L+ + SG A +VFD S ++++ W +LI+ K
Sbjct: 258 IHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVR 317
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E F KM+ G T+ ++L A + GK +H +++ + + D + +
Sbjct: 318 VHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKS-KEKPDVPLLN 376
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
+LMDMY KCG + + +VFD M +D+ W++++ Y ++ I +F M+ V
Sbjct: 377 SLMDMYGKCGEVEYSRRVFDVM--LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
P+ T ++LS C+ +G + G
Sbjct: 435 APDGITFVALLSGCSDTGLTEYG 457
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 7/215 (3%)
Query: 48 NALISAFANSGFIGSACQVFDE---SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
+ LI+ F+ + A ++FD+ SS+ W A+ GY +N P +AL +V M +
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
++ L+A D G+ +H V+ + ++D V++ L+ +Y + G DD
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKR-KEKVDQVVYNVLLKLYMESGLFDD 289
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A KVFD M S R+VV W+ L++ + + + +F M + + + TLT++L AC
Sbjct: 290 ARKVFDGM--SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPAC 347
Query: 225 AHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+ AL GK +H I K V L +L+DM
Sbjct: 348 SRVAALLTGKEIHAQI-LKSKEKPDVPLLNSLMDM 381
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+AQI K D N+L+ + G + + +VFD KD+ +W ++N Y N
Sbjct: 359 IHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGN 418
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E + F M +G D +T V++L + G +G + RV ++
Sbjct: 419 IEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYA 478
Query: 151 ALMDMYFKCGHCDDACKVFDEMPY 174
L+D+ + G +A KV + MP+
Sbjct: 479 CLVDILGRAGKIKEAVKVIETMPF 502
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ K G D + N+LISA+ G A ++F ++ DI++W A+I K++
Sbjct: 237 LHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSEN 296
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
P +ALK FV M G + T VSVL +++ + G+ +HG ++ G + + +
Sbjct: 297 PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG-CETGIVLGN 355
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
AL+D Y KCG+ +D+ FD + +++VCW+ L++GY + +F ML
Sbjct: 356 ALIDFYAKCGNLEDSRLCFDYI--RDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMGF 412
Query: 211 VPNEFTLTSVLSAC 224
P E+T ++ L +C
Sbjct: 413 RPTEYTFSTALKSC 426
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 37/273 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFI 60
M Q G P ++TF LK V + +++ I ++G++ + + ++L+ ++A + +
Sbjct: 407 MLQMGFRPTEYTFSTALK---SCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLM 463
Query: 61 GSACQVFD------------------------ESSVK--------DIIAWTALINGYVKN 88
A + D SVK D ++W I ++
Sbjct: 464 NDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRS 523
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
D E ++ F M + D T VS+L + D G +HG + D +V
Sbjct: 524 DYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFV 583
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+ L+DMY KCG KVF+E ++++ W+ L++ Q+A+ F LS
Sbjct: 584 CNVLIDMYGKCGSIRSVMKVFEET--REKNLITWTALISCLGIHGYGQEALEKFKETLSL 641
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIE 241
P+ + S+L+AC H G + +G + Q ++
Sbjct: 642 GFKPDRVSFISILTACRHGGMVKEGMGLFQKMK 674
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 9/210 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDL-DRFAGNALISAFANSG 58
M Q + PD++TF +L + SK + I+ I K F D F N LI + G
Sbjct: 536 MLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I S +VF+E+ K++I WTALI+ + EAL+ F + S G D ++ +S+L
Sbjct: 596 SIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
Query: 119 AAAMAGDDNFGKWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
A G G + G ++D Y +D+ + G+ +A + EMP+
Sbjct: 656 ACRHGGMVKEGMGLFQKMKDYGVEPEMDHY--RCAVDLLARNGYLKEAEHLIREMPFP-A 712
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
D W + G CN+F + R N++S
Sbjct: 713 DAPVWRTFLDG---CNRFAEEQRNTLNVVS 739
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 6/259 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLG-FDLDRFAGNALISAFANSGF 59
MR G P+Q T LL S V ++ K G F D F G L+ +
Sbjct: 106 MRYFGYLPNQSTVSGLLSCASLDVRAGT-QLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 164
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A QVF++ K + W +++ E + F ++ G + + + VL+
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ D + K +H + G + + V ++L+ Y KCG+ A ++F + D+
Sbjct: 225 VSCVKDLDISKQLHCSATKKG-LDCEISVVNSLISAYGKCGNTHMAERMFQDA--GSWDI 281
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
V W+ ++ + A+++F +M PN+ T SVL + L G+ +H
Sbjct: 282 VSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGM 341
Query: 240 IECKKVSLNSVELGTALVD 258
+ K + LG AL+D
Sbjct: 342 L-IKNGCETGIVLGNALID 359
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 4/193 (2%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
+ N +IS + G + A +VFD+ ++ +++ +I GY K +A F +MR
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
G + TV +L A++ D G +HG ++ G D +V + L+ +Y + +
Sbjct: 110 GYLPNQSTVSGLLSCASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A +VF++MP ++ + W+ +++ ++ + F ++ E + VL
Sbjct: 168 AEQVFEDMP--FKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGV 225
Query: 225 AHSGALDQGKLVH 237
+ LD K +H
Sbjct: 226 SCVKDLDISKQLH 238
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD 109
+I F+ G I ++F KD I WTA+I+ +V N EAL F KM +
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 110 ALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVF 169
+ T SVL A A D G +HG V+ V D V ++L+ MY KCG+ +DA K+F
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN-DLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 170 DEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
+ S ++V ++ +++GY + A+++F + S PN T ++LSAC H G
Sbjct: 497 SCI--SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGY 554
Query: 230 LDQGKLVHQYIECKKVSLN 248
+D G +Y + K S N
Sbjct: 555 VDLG---WKYFKSMKSSYN 570
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 45/261 (17%)
Query: 1 MRQKG-VEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
MRQ+G V+ + +T ++ K V + I+ + ++ + D F GN+L+S ++ G
Sbjct: 265 MRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLG 324
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
++G A VF KD ++W +LI G V+ SEA + F KM G D ++
Sbjct: 325 YMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVS------ 374
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
W+ ++ + G ++F MP +D
Sbjct: 375 ------------------------------WTDMIKGFSGKGEISKCVELFGMMP--EKD 402
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQ 238
+ W+ +++ +V +++A+ F ML V PN +T +SVLSA A L +G +H
Sbjct: 403 NITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHG 462
Query: 239 YIECKKVSLNSVELGTALVDM 259
+ K +N + + +LV M
Sbjct: 463 RV-VKMNIVNDLSVQNSLVSM 482
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTG-T 106
++++ + G I A +FD + +++I WTA+I+GY K + F++MR G
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
V++ T+ + +A G +HG V ++ D ++ ++LM MY K G+ +A
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGL-VSRMPLEFDLFLGNSLMSMYSKLGYMGEAK 330
Query: 167 KVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
VF M +D V W+ L+ G VQ + +A +F M ++V
Sbjct: 331 AVFGVM--KNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMV 373
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
Query: 45 FAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST 104
F N+ IS A +G + A +F + S + I++W A+I+ Y +N S+A + F +M
Sbjct: 51 FQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM--- 107
Query: 105 GTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDD 164
V T + + A + + GK F + + ++ ++ + + G D+
Sbjct: 108 --PVRVTTSYNAMITAMIKNKCDLGKAYELF---CDIPEKNAVSYATMITGFVRAGRFDE 162
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
A ++ E P +RD V +VL++GY++ K+ +A+RVF M VV
Sbjct: 163 AEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVV 209
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M QK V P+ +TF +L + + + I+ ++ K+ D N+L+S + G
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGN 488
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A ++F S +I+++ +I+GY N +ALK F + S+G + +T +++L A
Sbjct: 489 TNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
Query: 120 AAMAGDDNFGKWVHGFYVQAG-RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
G + G W + +++ ++ ++ ++D+ + G DDA + MP
Sbjct: 549 CVHVGYVDLG-WKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHS 607
Query: 179 VVCWSVLVA 187
V S+L A
Sbjct: 608 GVWGSLLSA 616
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 61 GSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAA 120
+A VFD+ VK+ ++WTA+I+G V N + F M+ + +T++SVL A
Sbjct: 202 AAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Query: 121 AMAGDDNFG----KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
+ N+G K +HGF + G D + +A M MY +CG+ + +F+
Sbjct: 262 V---ELNYGSSLVKEIHGFSFRHG-CHADERLTAAFMTMYCRCGNVSLSRVLFE--TSKV 315
Query: 177 RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
RDVV WS +++GY + + + + M + + N TL +++SAC +S L V
Sbjct: 316 RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 237 H-QYIECKKVSLNSVELGTALVDM 259
H Q ++C +S + LG AL+DM
Sbjct: 376 HSQILKCGFMS--HILLGNALIDM 397
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 125/241 (51%), Gaps = 11/241 (4%)
Query: 1 MRQKGVEPDQHTF----PLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFA 55
M+++ + P++ T P +++ + +V++ I+ F+ G D A ++ +
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELNYGSSLVKE---IHGFSFRHGCHADERLTAAFMTMYC 298
Query: 56 NSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
G + + +F+ S V+D++ W+++I+GY + SE + +MR G +++T+++
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ A + +F VH ++ G + + +AL+DMY KCG A +VF E+ +
Sbjct: 359 IVSACTNSTLLSFASTVHSQILKCGFMS-HILLGNALIDMYAKCGSLSAAREVFYEL--T 415
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
+D+V WS ++ Y +A+ +F M+ ++ ++LSAC H+G +++ +
Sbjct: 416 EKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQT 475
Query: 236 V 236
+
Sbjct: 476 I 476
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 26 EDPFMIYAQI----FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTAL 81
++PF++ AQ+ K G D D N+LIS +A + +VFDE +D +++ ++
Sbjct: 60 QEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSI 119
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR-AAAMAGDDNFGKWVHGFYVQAG 140
IN ++ L EA+K +M G + V S+L M + H +
Sbjct: 120 INSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDE 179
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
R+Q + +AL+DMY K A VFD+M ++ V W+ +++G V ++ +
Sbjct: 180 RMQESVLLSTALVDMYLKFDDHAAAFHVFDQM--EVKNEVSWTAMISGCVANQNYEMGVD 237
Query: 201 VFWNMLSDNVVPNEFTLTSVLSAC 224
+F M +N+ PN TL SVL AC
Sbjct: 238 LFRAMQRENLRPNRVTLLSVLPAC 261
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 15/253 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVED-PFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR++G+E + T ++ + + +++QI K GF GNALI +A G
Sbjct: 344 MRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGS 403
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +A +VF E + KD+++W+++IN Y + SEAL+ F M G VD + +++L A
Sbjct: 404 LSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSA 463
Query: 120 AAMAGDDNFGKWVHGFYVQAGR----VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
AG + + QAG+ V L+ Y + +++ + G DDA +V MP
Sbjct: 464 CNHAG---LVEEAQTIFTQAGKYHMPVTLEHY--ACYINLLGRFGKIDDAFEVTINMPMK 518
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWN--MLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+ WS L++ + A ++ N M S+ P + L S + SG
Sbjct: 519 PSARI-WSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIH--TESGNYHAA 575
Query: 234 KLVHQYIECKKVS 246
+ V + ++ +K++
Sbjct: 576 EEVRRVMQRRKLN 588
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 30 MIYAQIFKLGFDL-DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
M YA+ L + + ++ +++I +++ G + A ++FD S K+++ WTA+ GY+
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 89 DLPSEALKCFVKMRSTGTGV-DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY 147
P L+ + T D+L +VSVL A ++ GK +HG ++ G + +D
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTG-ILMDKK 429
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ +A +DMY KCG+ + A ++FD RD V ++ ++AG + + F +M
Sbjct: 430 LVTAFVDMYSKCGNVEYAERIFD--SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE 487
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQG-KLVHQYIECKKVS 246
P+E T ++LSAC H G + +G K IE +S
Sbjct: 488 GGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNIS 527
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 37/251 (14%)
Query: 42 LDRFAGNALISAFANSGFIGSACQVF-DESSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
+D A NA+I+A+ G I A VF + D I+W LI GY +N EALK V
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG 160
M G D + +VL + GK VH ++ G + +V S ++D+Y KCG
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYS-NKFVSSGIVDVYCKCG 309
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV--------- 211
+ A + Y + ++ S ++ GY K +A R+F ++ N+V
Sbjct: 310 NMKYAESA--HLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY 367
Query: 212 -----------------------PNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLN 248
P+ + SVL AC+ ++ GK +H + + L
Sbjct: 368 LNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGH-SLRTGILM 426
Query: 249 SVELGTALVDM 259
+L TA VDM
Sbjct: 427 DKKLVTAFVDM 437
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 131/305 (42%), Gaps = 74/305 (24%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALING 84
++D F+ + + K G L + N L++ ++ SG + A VFDE +++ +W A+I
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 85 YVK-----------------NDL----------------PSEALKCFVKMRSTGTG---V 108
YVK DL SEA++ F +M +
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDAC 166
D TV ++++ +A + +G+ +HG V+ G DG + S+L+ MY KCG + C
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGN---DGTKFAVSSLIHMYSKCGKFKEVC 180
Query: 167 KVF-------------DEMPYSY-------------------RDVVCWSVLVAGYVQCNK 194
+F + M +Y D + W+ L+AGY Q
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGY 240
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGT 254
++A+++ +M + + +E + +VL+ + +L GK VH + K S ++ + +
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARV-LKNGSYSNKFVSS 299
Query: 255 ALVDM 259
+VD+
Sbjct: 300 GIVDV 304
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 113/226 (50%), Gaps = 7/226 (3%)
Query: 38 LGFDLDRFAGNALISAFANSGFIGSACQVFD----ESSVKDIIAWTALINGYVKNDLPSE 93
LG D NALIS F++ ++ + + D+++WT++I+G V N +
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
A F +M + G ++ T++++L A GK +HG+ V G ++ G+V SAL+
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG-LEDHGFVRSALL 330
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY KCG +A +F + P + V ++ ++ Y A+ +F M + +
Sbjct: 331 DMYGKCGFISEAMILFRKTP--KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLD 388
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
T T++L+AC+H+G D G+ + ++ K + +E +VD+
Sbjct: 389 HLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDL 434
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 41/243 (16%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF--MIYAQIFKLGFDLDRFAGNALISAFANSG 58
M + G++ D P LLK S+ +++ F MI+ + K ++ D F ++LI ++ G
Sbjct: 108 MYKDGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFG 166
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+G+A +VF + +D++ + A+I+GY N EAL M+ G D +T
Sbjct: 167 EVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVIT------ 220
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY-SYR 177
W+AL+ + + + ++ + M Y+
Sbjct: 221 ------------------------------WNALISGFSHMRNEEKVSEILELMCLDGYK 250
Query: 178 -DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLV 236
DVV W+ +++G V + + A F ML+ + PN T+ ++L AC + GK +
Sbjct: 251 PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310
Query: 237 HQY 239
H Y
Sbjct: 311 HGY 313
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 42 LDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM 101
L R A L++ + G + A +VFDE +DI +I +N E+L F +M
Sbjct: 50 LTRIAAK-LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREM 108
Query: 102 RSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGH 161
G +DA V S+L+A+ D FGK +H ++ + D ++ S+L+DMY K G
Sbjct: 109 YKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS-YESDAFIVSSLIDMYSKFGE 167
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
+A KVF ++ +D+V ++ +++GY ++ +A+ + +M + P+ T +++
Sbjct: 168 VGNARKVFSDL--GEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALI 225
Query: 222 SACAH 226
S +H
Sbjct: 226 SGFSH 230
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Query: 95 LKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMD 154
L+ V++ + G DA +V +LR + G + + +HG+ + G V + + ++LM
Sbjct: 40 LRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVS-NTRLSNSLMR 98
Query: 155 MYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNE 214
Y +DA KVFDEMP DV+ W+ LV+GYVQ +FQ+ I +F + +V PNE
Sbjct: 99 FYKTSDSLEDAHKVFDEMPDP--DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNE 156
Query: 215 FTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
F+ T+ L+ACA G +H + + +V +G L+DM
Sbjct: 157 FSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D N LI AF SG +A QV + + +W ++ GYV ++ EA + F KM
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCG 160
S+G D ++ VL A A +G +H A ++ LD V SAL+DMY KCG
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHAC---AHKLGLDSRVVVASALIDMYSKCG 369
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTLTS 219
A +F MP ++++ W+ +++GY + +AI++F + + + P+ FT +
Sbjct: 370 MLKHAELMFWTMP--RKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLN 427
Query: 220 VLSACAH 226
+L+ C+H
Sbjct: 428 LLAVCSH 434
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++ + K GF + N+L+ + S + A +VFDE D+I+W +L++GYV++
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
E + F+++ + + + + L A A G +H V+ G + + V +
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+DMY KCG DDA VF M +D V W+ +VA + K + + F M +
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHM--EEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN--- 251
Query: 211 VPNEFTLTSVLSACAHSGALDQG 233
P+ T ++ A SG +
Sbjct: 252 -PDTVTYNELIDAFVKSGDFNNA 273
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 121/243 (49%), Gaps = 7/243 (2%)
Query: 5 GVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRF-AGNALISAFANSGFIGS 62
G P F L S+ ++ I+ + K+GFD+ +ALI + I +
Sbjct: 310 GKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIEN 369
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
+ ++ ++ +L+ + + + ++ F M GTG+D +T+ +VL+A ++
Sbjct: 370 SALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSL 429
Query: 123 AGDDNFGK--WVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVV 180
+ ++ VH +++G D V +L+D Y K G + + KVFDE+ ++
Sbjct: 430 SLPESLHSCTLVHCCAIKSGYAA-DVAVSCSLIDAYTKSGQNEVSRKVFDELDTP--NIF 486
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
C + ++ GY + D +++ M N++P+E T+ SVLS C+HSG +++G+L+ +
Sbjct: 487 CLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSL 546
Query: 241 ECK 243
E K
Sbjct: 547 ESK 549
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 5 GVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G+ TFP +L + S + + ++ ++ LGF + F +AL+ +A + A
Sbjct: 107 GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVA 166
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMA 123
++FDE +++ L+ + + + +++M G + LT ++R +
Sbjct: 167 LKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHD 226
Query: 124 GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWS 183
GK +H V++G + +V + L+D Y CG + + F+ +P +DV+ W+
Sbjct: 227 RLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPE--KDVISWN 284
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
+V+ D++ +F M P+ S L+ C+ + + GK +H Y+
Sbjct: 285 SIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKM 344
Query: 244 KVSLNSVELGTALVDM 259
++S+ + +AL+DM
Sbjct: 345 GFDVSSLHVQSALIDM 360
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 9/239 (3%)
Query: 23 PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALI 82
P + P M ++ + + N I SG + SA + FDE SV+D++ + LI
Sbjct: 25 PFIATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLI 84
Query: 83 NGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNF---GKWVHGFYVQA 139
+G + A++ + +M S G A T SVL ++ D+ F G VH +
Sbjct: 85 SGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL---SVCSDELFCREGIQVHCRVISL 141
Query: 140 GRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAI 199
G + +V SAL+ +Y D A K+FDEM R++ ++L+ + Q + +
Sbjct: 142 G-FGCNMFVRSALVGLYACLRLVDVALKLFDEML--DRNLAVCNLLLRCFCQTGESKRLF 198
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVD 258
V+ M + V N T ++ C+H + +GK +H + +++++ + LVD
Sbjct: 199 EVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVD 257
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 116/241 (48%), Gaps = 6/241 (2%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDR-FAGNALISAFANSG 58
M +GV + T+ +++ S +V + +++ + K G+++ F N L+ ++ G
Sbjct: 204 MELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACG 263
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
+ + + F+ KD+I+W ++++ ++L F KM+ G +S L
Sbjct: 264 DLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLN 323
Query: 119 AAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRD 178
+ D GK +H + ++ G +V SAL+DMY KC +++ ++ +P +
Sbjct: 324 FCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP--CLN 381
Query: 179 VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS--GALDQGKLV 236
+ C + L+ + C +D I +F M+ + +E TL++VL A + S +L LV
Sbjct: 382 LECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLV 441
Query: 237 H 237
H
Sbjct: 442 H 442
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 115/232 (49%), Gaps = 4/232 (1%)
Query: 30 MIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKND 89
M++ + G D NAL++ +A + SA VF +DI++W ++ + N
Sbjct: 209 MLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANG 268
Query: 90 LPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG-RVQLDGYV 148
P ++L+ F M +G D +T V+ A + + G+ +HG +++G + V
Sbjct: 269 HPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSV 328
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS- 207
++++ MY KCG + A VF+E+ RDV+ + ++ G+ F++A + M S
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEELV--CRDVISSNAILNGFAANGMFEEAFGILNQMQSV 386
Query: 208 DNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
D + P+ T+ S+ S C +G+ VH Y ++ ++E+ +++DM
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDM 438
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 20/253 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM---IYAQIFKLGFDLDRFA--GNALISAFA 55
M G E D TF ++ S +E+ + ++ + K G+ + GN++IS ++
Sbjct: 280 MTGSGQEADTVTFSCVISACSS--IEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYS 337
Query: 56 NSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST-GTGVDALTVV 114
G +A VF+E +D+I+ A++NG+ N + EA +M+S D TVV
Sbjct: 338 KCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVV 397
Query: 115 SVLRAAAMAGDDNF---GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
S+ ++ GD +F G+ VHG+ V+ V ++++DMY KCG A +F
Sbjct: 398 SI---TSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFK- 453
Query: 172 MPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSV---LSACAHSG 228
++RD+V W+ +++ + Q N F + + + ++F+L++V L++C S
Sbjct: 454 -TTTHRDLVSWNSMISAFSQ-NGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSD 511
Query: 229 ALDQGKLVHQYIE 241
+L GK VH +++
Sbjct: 512 SLIFGKSVHCWLQ 524
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 7/204 (3%)
Query: 41 DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK 100
+LD N LI+ + I SA +VF S ++ +W +I+ +N E + F
Sbjct: 613 ELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF-- 670
Query: 101 MRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCG 160
R+ + +T V +L A+ G ++G H ++ G Q + +V +AL+DMY CG
Sbjct: 671 -RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRG-FQANPFVSAALVDMYSSCG 728
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV-PNEFTLTS 219
+ KVF + W+ +++ + + A+ +F + S++ + PN+ + S
Sbjct: 729 MLETGMKVFRN--SGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFIS 786
Query: 220 VLSACAHSGALDQGKLVHQYIECK 243
+LSAC+HSG +D+G ++ +E K
Sbjct: 787 LLSACSHSGFIDEGLSYYKQMEEK 810
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 108/239 (45%), Gaps = 4/239 (1%)
Query: 22 KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTAL 81
+ E P ++ K G D + L++ + +G + S+ +FDE KD+I W ++
Sbjct: 100 RTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSM 159
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
I +N A+ F++M G D+ T++ A + +H ++ G
Sbjct: 160 ITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGL 219
Query: 142 VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
V D + +ALM++Y K + A VF M +RD+V W+ ++ + + +++
Sbjct: 220 VG-DSSLCNALMNLYAKGENLSSAECVFTHME--HRDIVSWNTIMTKCLANGHPRKSLQY 276
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS-VELGTALVDM 259
F +M + T + V+SAC+ L G+ +H + S + V +G +++ M
Sbjct: 277 FKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISM 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 86/193 (44%), Gaps = 24/193 (12%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRS--TG 105
N++I + G A +F ++ +D+++W ++I+ + +N +A F ++ S +
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSC 492
Query: 106 TGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDA 165
+ TV+++L + + FGK VH + +Q G + SA + +
Sbjct: 493 SKFSLSTVLAILTSCDSSDSLIFGKSVHCW------LQKLGDLTSAFLRL---------- 536
Query: 166 CKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEF-TLTSVLSAC 224
E RD+ W+ +++G +++R F M + + ++ TL +SA
Sbjct: 537 -----ETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISAS 591
Query: 225 AHSGALDQGKLVH 237
+ G + QG+ H
Sbjct: 592 GNLGLVLQGRCFH 604
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 123/270 (45%), Gaps = 40/270 (14%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLD--------RFAG---- 47
M V+P+ TFP L+K S V ++ Q K GF D RF G
Sbjct: 77 MLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGD 136
Query: 48 -------------------NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
N+L+ A +G + A + F V D+++WT +ING+ K
Sbjct: 137 LESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKK 196
Query: 89 DLPSEALKCFVKMRSTGTGV---DALTVVSVLRAAAM--AGDDNFGKWVHGFYVQAGRVQ 143
L ++AL F +M V + T VSVL + A G GK +HG YV + +
Sbjct: 197 GLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHG-YVMSKEII 255
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
L + +AL+DMY K G + A +FD++ + V W+ +++ + + A+ +F
Sbjct: 256 LTTTLGTALLDMYGKAGDLEMALTIFDQI--RDKKVCAWNAIISALASNGRPKQALEMFE 313
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
M S V PN TL ++L+ACA S +D G
Sbjct: 314 MMKSSYVHPNGITLLAILTACARSKLVDLG 343
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 26 EDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSV----KDIIAWTAL 81
E+ + ++ K G N LI + G +A + + D+ WTA+
Sbjct: 264 EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAM 323
Query: 82 INGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGR 141
I+G + N + +AL F KM G +A+T++S + A + N G VH V+ G
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 142 VQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRV 201
+ D V ++L+DMY KCG +DA KVFD + +DV W+ ++ GY Q A +
Sbjct: 384 ID-DVLVGNSLVDMYSKCGKLEDARKVFDSV--KNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
F M N+ PN T +++S +G D+G+
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNG--DEGE 471
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 12/196 (6%)
Query: 48 NALISAFANSGFIGSACQVF-----DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
N +IS + +G G A +F D ++ W +I GY++N EAL+ F KM+
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGY--VWSALMDMYFKCG 160
+ +++T++S+L A A + +HG + R LD V +AL D Y K G
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL---RRNLDAIHAVKNALTDTYAKSG 573
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSV 220
+ + +F M +D++ W+ L+ GYV + A+ +F M + + PN TL+S+
Sbjct: 574 DIEYSRTIFLGM--ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSI 631
Query: 221 LSACAHSGALDQGKLV 236
+ A G +D+GK V
Sbjct: 632 ILAHGLMGNVDEGKKV 647
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 3/206 (1%)
Query: 36 FKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEAL 95
F L + D F L+S +A G I A +VFD +++ W+A+I Y + + E
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 96 KCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDM 155
K F M G D +L+ A GD GK +H ++ G V ++++ +
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSC-LRVSNSILAV 225
Query: 156 YFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEF 215
Y KCG D A K F M RDV+ W+ ++ Y Q K ++A+ + M + + P
Sbjct: 226 YAKCGELDFATKFFRRM--RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 216 TLTSVLSACAHSGALDQGKLVHQYIE 241
T ++ G D + Q +E
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKME 309
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 40/262 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + GV PD FP +L+ + VE +I++ + KLG N++++ +A G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ A + F +D+IAW +++ Y +N EA++ +M G +T
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT------- 284
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY--SYR 177
W+ L+ Y + G CD A + +M
Sbjct: 285 -----------------------------WNILIGGYNQLGKCDAAMDLMQKMETFGITA 315
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
DV W+ +++G + A+ +F M VVPN T+ S +SAC+ ++QG VH
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 238 QYIECKKVSLNSVELGTALVDM 259
I K ++ V +G +LVDM
Sbjct: 376 S-IAVKMGFIDDVLVGNSLVDM 396
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 33/203 (16%)
Query: 24 VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALIN 83
V+ +++ K+GF D GN+L+ ++ G + A +VFD KD+ W ++I
Sbjct: 367 VINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMIT 426
Query: 84 GYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
GY + +A + F +M+ + +T +++ GD+ + + G+VQ
Sbjct: 427 GYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQ 486
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
+ W+ ++ Y + G D+A ++F +M +S
Sbjct: 487 RNTATWNLIIAGYIQNGKKDEALELFRKMQFS---------------------------- 518
Query: 204 NMLSDNVVPNEFTLTSVLSACAH 226
+PN T+ S+L ACA+
Sbjct: 519 -----RFMPNSVTILSLLPACAN 536
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 7/201 (3%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + + D NAL +A SG I + +F KDII W +LI GYV +
Sbjct: 546 IHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGS 605
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVW- 149
AL F +M++ G + T+ S++ A + G+ + GK V FY A + +
Sbjct: 606 YGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV--FYSIANDYHIIPALEH 663
Query: 150 -SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
SA++ +Y + ++A + EM + W + G AI N+ S
Sbjct: 664 CSAMVYLYGRANRLEEALQFIQEMNIQSETPI-WESFLTGCRIHGDIDMAIHAAENLFS- 721
Query: 209 NVVPNEFTLTSVLSACAHSGA 229
+ P S++S GA
Sbjct: 722 -LEPENTATESIVSQIYALGA 741
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 116/218 (53%), Gaps = 15/218 (6%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE-------SSVK-DII 76
V+D ++ QI G + + N+LI++F ++G + A +F E +VK +++
Sbjct: 345 VKDAEHLFRQIRNKGIE----SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 77 AWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY 136
WT++I G ++L+ F +M+ + +++T+ +L A N G+ +HG
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHV 460
Query: 137 VQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQ 196
++ + + V +AL++MY KCG + VF+ + +D++ W+ ++ GY +
Sbjct: 461 IRTSMSE-NILVQNALVNMYAKCGLLSEGSLVFEAI--RDKDLISWNSIIKGYGMHGFAE 517
Query: 197 DAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
A+ +F M+S P+ L +VLSAC+H+G +++G+
Sbjct: 518 KALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGR 555
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 50 LISAFANSGFIGSACQVFDESSV---KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
LIS +A G + A VF+ S+ D+ W +++ V + L AL+ + MR G
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDAC 166
D + +LRA G + H +Q G ++ + +V + L+ +Y K G DA
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIG-LKENLHVVNELLTLYPKAGRMGDAY 213
Query: 167 KVFDEMPYSYR---------------------------------DVVCWSVLVAGYVQCN 193
+F EMP R D V W+ +++ + QC
Sbjct: 214 NLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 194 KFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYI 240
KF+D ++ F M +S N V E L S CA AL + VH Y+
Sbjct: 274 KFEDVLKYFHLMRMSGNAVSGE-ALAVFFSVCAELEALSIAEKVHGYV 320
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 134/333 (40%), Gaps = 77/333 (23%)
Query: 1 MRQKGVEPDQHTFPLLLKM---FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
MRQ+G+ D + PL+L+ + + F + Q+ ++G + N L++ + +
Sbjct: 149 MRQRGLTGDGYILPLILRACRYLGRFGLCRAF--HTQVIQIGLKENLHVVNELLTLYPKA 206
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G +G A +F E V++ ++W +I G+ + A+K F M+ D +T SVL
Sbjct: 207 GRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVL 266
Query: 118 RAAA----------------MAGDD-------------------NFGKWVHGFYVQAG-- 140
+ M+G+ + + VHG+ ++ G
Sbjct: 267 SCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFE 326
Query: 141 ---------------------------RVQLDGY-VWSALMDMYFKCGHCDDACKVFDEM 172
+++ G W++L+ + G D+A +F E+
Sbjct: 327 EYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSEL 386
Query: 173 PYSYR------DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
+VV W+ ++ G + D++ F M V+ N T+ +LS CA
Sbjct: 387 EEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAE 446
Query: 227 SGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
AL+ G+ +H ++ +S N + + ALV+M
Sbjct: 447 LPALNLGREIHGHVIRTSMSEN-ILVQNALVNM 478
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + + + NAL++ +A G + VF+ KD+I+W ++I GY +
Sbjct: 456 IHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGF 515
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-- 148
+AL F +M S+G D + +V+VL A + AG G+ + FY + R L+
Sbjct: 516 AEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI--FYSMSKRFGLEPQQEH 573
Query: 149 WSALMDMYFKCGHCDDACKVFDEMP 173
++ ++D+ + G +A ++ MP
Sbjct: 574 YACIVDLLGRVGFLKEASEIVKNMP 598
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N++I+ +G + +A ++FDE K+II+W +I+ Y+ + P ++ F +M G
Sbjct: 188 NSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQ 247
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQA---GRVQLDGYVWSALMDMYFKCGHCDD 164
+ T+V +L A + G+ VH ++ V +D +AL+DMY KC
Sbjct: 248 GNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVID----TALIDMYGKCKEVGL 303
Query: 165 ACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSAC 224
A ++FD + S R+ V W+V++ + + + + +F M++ + P+E T VL C
Sbjct: 304 ARRIFDSL--SIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGC 361
Query: 225 AHSGALDQGK 234
A +G + QG+
Sbjct: 362 ARAGLVSQGQ 371
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 47/282 (16%)
Query: 16 LLKMFSKPVVEDP------FMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE 69
LLK F +VED F ++A++ G D L+ + +S F S+ V
Sbjct: 22 LLKGFK--LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKS--SSRFGDSSYTVSIY 77
Query: 70 SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG 129
S+ + + Y+ + P +AL + + G D+ T VS++ + G
Sbjct: 78 RSIGKLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSG 137
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD-------------------------- 163
K HG ++ G Q+ V ++LM MY CG D
Sbjct: 138 KMCHGQAIKHGCDQVLP-VQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVR 196
Query: 164 -----DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLT 218
A K+FDEMP ++++ W+++++ Y+ N +I +F M+ NE TL
Sbjct: 197 NGDVLAAHKLFDEMPD--KNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLV 254
Query: 219 SVLSACAHSGALDQGKLVHQYIECKKVSLN-SVELGTALVDM 259
+L+AC S L +G+ VH + + LN SV + TAL+DM
Sbjct: 255 LLLNACGRSARLKEGRSVHASL--IRTFLNSSVVIDTALIDM 294
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 79/175 (45%), Gaps = 3/175 (1%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPV-VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G + ++ T LLL + +++ ++A + + + ALI +
Sbjct: 241 MVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKE 300
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+G A ++FD S+++ + W +I + + P L+ F M + D +T V VL
Sbjct: 301 VGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCG 360
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLD-GYVWSALMDMYFKCGHCDDACKVFDEMP 173
A AG + G+ + V +++ + G+ W + ++Y G ++A + +P
Sbjct: 361 CARAGLVSQGQSYYSLMVDEFQIKPNFGHQW-CMANLYSSAGFPEEAEEALKNLP 414
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LI+ ++ + A VF + + W ++I+G+ N+ E +M +G
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ +T+ S+L A G+ GK H + ++ + +W++L+DMY K G A +
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VFD M RD V ++ L+ GY + K + A+ F +M + P+ T+ +VLSAC+HS
Sbjct: 481 VFDSM--RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 228 GALDQGKLVHQYIE 241
+ +G + +E
Sbjct: 539 NLVREGHWLFTKME 552
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A G + D L++ ++ + A + + S + + W LI Y++N
Sbjct: 105 LHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKR 164
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG-FYVQAGRVQLDGYVW 149
E++ + +M S G D T SV++A A D +G+ VHG V + R L YV
Sbjct: 165 FQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL--YVC 222
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR--------- 200
+AL+ MY + G D A ++FD M S RD V W+ ++ Y K +A +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRM--SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 201 -----VFWNMLSD---------------------NVVPNEFTLTSVLSACAHSGALDQGK 234
V WN ++ NV + + L AC+H GAL GK
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 235 LVH 237
+ H
Sbjct: 341 VFH 343
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 41/297 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF--MIYAQIFKLGFDLDRFAGNALISAFANSG 58
M KG+ D+ T+P ++K + +++ + +++ I + + NALIS + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACA-ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFG 233
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK---------------------- 96
+ A ++FD S +D ++W A+IN Y + EA K
Sbjct: 234 KVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAG 293
Query: 97 -------------CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
C V MR+ + ++ +++ L+A + G +GK H +++
Sbjct: 294 GCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFS 353
Query: 144 LD-GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
D V ++L+ MY +C A VF ++ + + W+ +++G+ + ++ +
Sbjct: 354 HDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN--SLSTWNSIISGFAYNERSEETSFLL 411
Query: 203 WNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
ML PN TL S+L A G L GK H YI ++ + + L +LVDM
Sbjct: 412 KEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+L+ +A SG I +A +VFD +D + +T+LI+GY + AL F M +G
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWV-----HGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
D +T+V+VL A + + G W+ H F + R++L+ Y S ++D+Y + G+
Sbjct: 523 PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGI---RLRLEHY--SCMVDLYCRAGYL 577
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
D A +F +PY +C ++L A + N
Sbjct: 578 DKARDIFHTIPYEPSSAMCATLLKACLIHGN 608
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 93 EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNF--GKWVHGFYVQAGRVQLDGYVWS 150
EA + F +R + + S + G + F G+ +H + +G ++ D +
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSG-LEFDSVLVP 122
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+ Y D+A + + + + W+VL+ Y++ +FQ+++ V+ M+S +
Sbjct: 123 KLVTFYSAFNLLDEAQTITENSEILH--PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGI 180
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+EFT SV+ ACA G++VH IE N + + AL+ M
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN-LYVCNALISM 228
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+LI+ ++ + A VF + + W ++I+G+ N+ E +M +G
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
+ +T+ S+L A G+ GK H + ++ + +W++L+DMY K G A +
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
VFD M RD V ++ L+ GY + K + A+ F +M + P+ T+ +VLSAC+HS
Sbjct: 481 VFDSM--RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 228 GALDQGKLVHQYIE 241
+ +G + +E
Sbjct: 539 NLVREGHWLFTKME 552
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
++A G + D L++ ++ + A + + S + + W LI Y++N
Sbjct: 105 LHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKR 164
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHG-FYVQAGRVQLDGYVW 149
E++ + +M S G D T SV++A A D +G+ VHG V + R L YV
Sbjct: 165 FQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL--YVC 222
Query: 150 SALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR--------- 200
+AL+ MY + G D A ++FD M S RD V W+ ++ Y K +A +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRM--SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 201 -----VFWNMLSD---------------------NVVPNEFTLTSVLSACAHSGALDQGK 234
V WN ++ NV + + L AC+H GAL GK
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 235 LVH 237
+ H
Sbjct: 341 VFH 343
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 41/297 (13%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPF--MIYAQIFKLGFDLDRFAGNALISAFANSG 58
M KG+ D+ T+P ++K + +++ + +++ I + + NALIS + G
Sbjct: 175 MMSKGIRADEFTYPSVIKACA-ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFG 233
Query: 59 FIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALK---------------------- 96
+ A ++FD S +D ++W A+IN Y + EA K
Sbjct: 234 KVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAG 293
Query: 97 -------------CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQ 143
C V MR+ + ++ +++ L+A + G +GK H +++
Sbjct: 294 GCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFS 353
Query: 144 LD-GYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVF 202
D V ++L+ MY +C A VF ++ + + W+ +++G+ + ++ +
Sbjct: 354 HDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN--SLSTWNSIISGFAYNERSEETSFLL 411
Query: 203 WNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
ML PN TL S+L A G L GK H YI ++ + + L +LVDM
Sbjct: 412 KEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
N+L+ +A SG I +A +VFD +D + +T+LI+GY + AL F M +G
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWV-----HGFYVQAGRVQLDGYVWSALMDMYFKCGHC 162
D +T+V+VL A + + G W+ H F + R++L+ Y S ++D+Y + G+
Sbjct: 523 PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGI---RLRLEHY--SCMVDLYCRAGYL 577
Query: 163 DDACKVFDEMPYSYRDVVCWSVLVAGYVQCN 193
D A +F +PY +C ++L A + N
Sbjct: 578 DKARDIFHTIPYEPSSAMCATLLKACLIHGN 608
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 93 EALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNF--GKWVHGFYVQAGRVQLDGYVWS 150
EA + F +R + + S + G + F G+ +H + +G ++ D +
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSG-LEFDSVLVP 122
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNV 210
L+ Y D+A + + + + W+VL+ Y++ +FQ+++ V+ M+S +
Sbjct: 123 KLVTFYSAFNLLDEAQTITENSEILH--PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGI 180
Query: 211 VPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
+EFT SV+ ACA G++VH IE N + + AL+ M
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN-LYVCNALISM 228
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 21/242 (8%)
Query: 1 MRQKGVEPDQHTFPLLLKM-FSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++ VE + T ++K S +++ ++A + G DL G A+IS +++ G
Sbjct: 176 MYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLV-VLGTAMISFYSSVGL 234
Query: 60 IGSACQVFDESSVK-DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLR 118
I A +V++ +V D + +LI+G ++N EA + R V VL
Sbjct: 235 INEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPN---------VRVLS 285
Query: 119 AAAMAGDDN----FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
++ DN GK +H ++ G V D + + LMDMY KCG A +F +P
Sbjct: 286 SSLAGCSDNSDLWIGKQIHCVALRNGFVS-DSKLCNGLMDMYGKCGQIVQARTIFRAIPS 344
Query: 175 SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN--VVPNEFTLTSVLSACAHSGALDQ 232
+ VV W+ ++ Y A+ +F M + V+PN T V+SACAH+G + +
Sbjct: 345 --KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKE 402
Query: 233 GK 234
GK
Sbjct: 403 GK 404
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 15/235 (6%)
Query: 8 PD--QHTFPLLL---KMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
PD HTF +L + S P E ++A + K G + + ALI ++ G +
Sbjct: 80 PDLSSHTFTPVLGACSLLSYP--ETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVD 137
Query: 63 ACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
+ +VF+ KD+++W AL++G+++N EAL F M + T+ SV++ A
Sbjct: 138 SVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCAS 197
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCW 182
GK VH V GR + + +A++ Y G ++A KV++ + + D V
Sbjct: 198 LKILQQGKQVHAMVVVTGRDLV--VLGTAMISFYSSVGLINEAMKVYNSLNV-HTDEVML 254
Query: 183 SVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+ L++G ++ +++A +L PN L+S L+ C+ + L GK +H
Sbjct: 255 NSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIH 304
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 2/172 (1%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
I+ + GF D N L+ + G I A +F K +++WT++I+ Y N
Sbjct: 303 IHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGD 362
Query: 91 PSEALKCFVKMRSTGTGV--DALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV 148
+AL+ F +M G+GV +++T + V+ A A AG GK G + R+
Sbjct: 363 GVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEH 422
Query: 149 WSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
+ +D+ K G ++ ++ + M + + ++ VA C+ D R
Sbjct: 423 YVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTR 474
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 3/192 (1%)
Query: 43 DRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
D+ + ++I + +G + A +F + KD + WT +I+G V+N+L +EA M
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMV 458
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRV-QLDGYVWSALMDMYFKCGH 161
G T +L +A + + GK +H + D + ++L+ MY KCG
Sbjct: 459 RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGA 518
Query: 162 CDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
+DA ++F +M +D V W+ ++ G A+ +F ML PN T VL
Sbjct: 519 IEDAYEIFAKM--VQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVL 576
Query: 222 SACAHSGALDQG 233
SAC+HSG + +G
Sbjct: 577 SACSHSGLITRG 588
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 50 LISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVD 109
+++A + G A ++FDE +++++W L+ G ++N +A + F M S D
Sbjct: 144 MLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----D 199
Query: 110 ALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVF 169
++ ++++ K + G + V W++++ Y + G +A ++F
Sbjct: 200 VVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV-----TWTSMVYGYCRYGDVREAYRLF 254
Query: 170 DEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS--DNVVPNEFTLTSVLSACAHS 227
EMP R++V W+ +++G+ +++A+ +F M D V PN TL S+ AC
Sbjct: 255 CEMP--ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGL 312
Query: 228 G 228
G
Sbjct: 313 G 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
+L+S +A +G++ A +F+ ++I+ A++ GYVK +EA F R
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF---REMPKN 137
Query: 108 VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
V + TV+ A+ D V F R + W+ L+ + G + A +
Sbjct: 138 VVSWTVM----LTALCDDGRSEDAVELFDEMPERNVVS---WNTLVTGLIRNGDMEKAKQ 190
Query: 168 VFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
VFD MP RDVV W+ ++ GY++ + ++A +F +M NVV
Sbjct: 191 VFDAMP--SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 232
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 67/256 (26%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
+++ + G + A ++F E ++I++WTA+I+G+ N+L EAL F++M+
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDA 294
Query: 108 V--DALTVVSVLRAAAMAGDD--NFGKWVHGFYVQAG--RVQLDGYVWSALMDMY----- 156
V + T++S+ A G + G+ +H + G V DG + +L+ MY
Sbjct: 295 VSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGL 354
Query: 157 ------------------------FKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQC 192
K G + A +F+ + S D V W+ ++ GY++
Sbjct: 355 IASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVK-SLHDKVSWTSMIDGYLEA 413
Query: 193 ----------NKFQDAIRVFWNMLSDNVVPNEF---------------------TLTSVL 221
K D V W ++ +V NE T + +L
Sbjct: 414 GDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Query: 222 SACAHSGALDQGKLVH 237
S+ + LDQGK +H
Sbjct: 474 SSAGATSNLDQGKHIH 489
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLG--FDLDRFAGNALISAFANS 57
M + G++P T+ +LL + ++ I+ I K +D D N+L+S +A
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC 516
Query: 58 GFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
G I A ++F + KD ++W ++I G + L +AL F +M +G +++T + VL
Sbjct: 517 GAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVL 576
Query: 118 RAAAMA-----GDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
A + + G + F + +Q G +D Y+ +++D+ + G +A + +
Sbjct: 577 SACSHSGLITRGLELFKAMKETYSIQPG---IDHYI--SMIDLLGRAGKLKEAEEFISAL 631
Query: 173 PYS 175
P++
Sbjct: 632 PFT 634
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 10/228 (4%)
Query: 34 QIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSE 93
Q+F D + N + +G++ +A +FDE +D+++W +I+G V
Sbjct: 60 QLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEY 119
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
++ F M+ T S+L A++ G+ +HG + +G + + VW+++M
Sbjct: 120 GIRVFFDMQRWEIRPTEFTF-SIL--ASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVM 176
Query: 154 DMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPN 213
DMY + G D A VF M RDVV W+ L+ + A+ FW M + P+
Sbjct: 177 DMYRRLGVFDYALSVFLTM--EDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
Query: 214 EFTLTSVLSACAHSGALDQGKLVHQYIECKKVSL--NSVELGTALVDM 259
E+T++ V+S C+ L +GK C K+ NS+ LG A +DM
Sbjct: 235 EYTVSMVVSICSDLRELSKGK--QALALCIKMGFLSNSIVLG-AGIDM 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 1/172 (0%)
Query: 4 KGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
+ V PD+ TF +L + +++ +++ + KLGFDLD +L+ + +G + A
Sbjct: 330 QSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLA 389
Query: 64 CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVK-MRSTGTGVDALTVVSVLRAAAM 122
VF ++ KD+I W +I G +N E+L F + + + D +T++ +L A
Sbjct: 390 MGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCY 449
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
AG N G + +A V ++ ++++ + G ++A + D++P+
Sbjct: 450 AGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPF 501
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 8/260 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFD-LDRFAGNALISAFANSGF 59
M++ + P + TF +L + + V I+ G + N+++ + G
Sbjct: 127 MQRWEIRPTEFTFSILASLVT--CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGV 184
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
A VF +D+++W LI + AL F MR D TV V+
Sbjct: 185 FDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSI 244
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDV 179
+ + + GK ++ G + + V A +DM+ KC DD+ K+F E+ + V
Sbjct: 245 CSDLRELSKGKQALALCIKMGFLS-NSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWDSV 302
Query: 180 VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQY 239
+C S++ + C +DA+R+F ++ +V P++FT +SVLS+ ++ LD G VH
Sbjct: 303 LCNSMIGSYSWHCCG-EDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSL 360
Query: 240 IECKKVSLNSVELGTALVDM 259
+ L++ + T+L++M
Sbjct: 361 VIKLGFDLDTA-VATSLMEM 379
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 70 SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG 129
S +DI+AW +I + D P A+ F ++R D T SVL+A A
Sbjct: 330 SHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHA 388
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGY 189
+H ++ G + D + ++L+ Y KCG D +VFD+M RDVV W+ ++ Y
Sbjct: 389 LSIHAQVIKGGFLA-DTVLNNSLIHAYAKCGSLDLCMRVFDDM--DSRDVVSWNSMLKAY 445
Query: 190 VQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNS 249
+ + VF M ++ P+ T ++LSAC+H+G +++G + + + K +L
Sbjct: 446 SLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 250 VELGTALVDM 259
+ ++DM
Sbjct: 503 LNHYACVIDM 512
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 47 GNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGT 106
N LI+ +A G I A QVFD +++++WTALI GYV+ E F M S
Sbjct: 99 ANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS-HC 157
Query: 107 GVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC---GHCD 163
+ T+ SVL + GK VHG ++ G + YV +A++ MY +C
Sbjct: 158 FPNEFTLSSVLTSCRYEP----GKQVHGLALKLG-LHCSIYVANAVISMYGRCHDGAAAY 212
Query: 164 DACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA 223
+A VF+ + ++++V W+ ++A + CN + AI VF M SD V + TL ++ S+
Sbjct: 213 EAWTVFEAI--KFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Query: 224 CAHSGALDQGKLVHQYIECKKVSLNS-----VELGTALVDM 259
S L ++ ++ +++ S E+ TAL+ +
Sbjct: 271 LYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKV 311
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVV-EDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+RQ+ + PD +TF +LK + V I+AQ+ K GF D N+LI A+A G
Sbjct: 360 LRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGS 419
Query: 60 IGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +VFD+ +D+++W +++ Y + L F KM D+ T +++L A
Sbjct: 420 LDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSA 476
Query: 120 AAMAG--DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYR 177
+ AG ++ + F QL+ Y + ++DM + +A +V +MP
Sbjct: 477 CSHAGRVEEGLRIFRSMFEKPETLPQLNHY--ACVIDMLSRAERFAEAEEVIKQMPMD-P 533
Query: 178 DVVCWSVLVAG 188
D V W L+
Sbjct: 534 DAVVWIALLGS 544
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
Query: 1 MRQKGVEPDQHTFPLLL-KMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G++P+ HT+ +L+ + S+ E + Q+ + G + NALI+ + G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 60 IGSACQVFDESSVKDII----AWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A V + + + + LI GY K+++ +A+ KM D +T S
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNS 467
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ +G+ + + G V D + +++++D K ++AC +FD +
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVP-DQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+VV ++ L+ GY + K +A + MLS N +PN T +++ G L +
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 234 KLVHQ 238
L+ +
Sbjct: 587 TLLEE 591
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 123/258 (47%), Gaps = 10/258 (3%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR++G+E D H + L+ K ++ F+++ ++ + G + ALI G
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 60 IGSACQVFDESSVKDI----IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+G+A + +E K + + + LI+GY + + EA + M G D T +
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 116 VLRA-AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+ + D +W+ F + G V+L ++ L+D+Y K G+ ++A ++F EM
Sbjct: 440 IASCFNRLKRYDEAKQWL--FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 175 S--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
+ + ++V++ Y + K ++A ++ NM ++ + P+ +T TS++ + +D+
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDE 557
Query: 233 GKLVHQYIECKKVSLNSV 250
+ + K + NSV
Sbjct: 558 AMRLFSEMGLKGLDQNSV 575
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ KGV Q F L+ + K +V++ MIY + + GF D F N + S F
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 60 IGSACQ-VFD--ESSVK-DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A Q +F E VK +++T LI+ Y K EA + FV+M S G +A+T
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ A G + + ++A + D Y +++L+ + D+A ++F EM
Sbjct: 510 MIYAYCKQGKIKEARKLRA-NMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK 568
Query: 176 YRD--VVCWSVLVAGYVQCNKFQDAIRVFWNM 205
D V ++V+++G + K +A ++ M
Sbjct: 569 GLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 123/266 (46%), Gaps = 13/266 (4%)
Query: 5 GVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
GV + +T+ +++ + + + I ++ KLG+ N+L++ F + I A
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 64 CQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ D+ D + +T L++G +++ SEA+ +M G D +T +V+
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YR 177
G+ + + ++ G+++ D ++S ++D K H DDA +F EM
Sbjct: 215 LCKRGEPDLALNLLN-KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG---- 233
DV +S L++ ++ DA R+ +ML + PN T S++ A A G L +
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 234 -KLVHQYIECKKVSLNSVELGTALVD 258
+++ + I+ V+ NS+ G + D
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHD 359
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 47/255 (18%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KG+ PD T+ L+ + + D + + + + + + N+LI AFA G
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A ++FDE S +I+ + +LING+ +D EA + F M S D +T
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT--- 382
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ L++ + K D ++F +M S
Sbjct: 383 ---------------------------------YNTLINGFCKAKKVVDGMELFRDM--S 407
Query: 176 YR----DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
R + V ++ L+ G+ Q + +A VF M+SD V PN T ++L +G L+
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 232 QGKLVHQYIECKKVS 246
+ +V +Y++ K+
Sbjct: 468 KAMVVFEYLQKSKME 482
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 108/254 (42%), Gaps = 15/254 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAG----NALISAFAN 56
M Q+ ++P+ T+ L+ F + D QIF L D N LI+ F
Sbjct: 336 MIQRSIDPNIVTYNSLINGF---CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 57 SGFIGSACQVFDESS----VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT 112
+ + ++F + S V + + +T LI+G+ + A F +M S G + +T
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 113 VVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
++L G V Y+Q +++ D Y ++ + + K G +D +F +
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFE-YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 173 PYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG-A 229
DV+ ++ +++G+ + ++A +F M D +P+ T +++ A G
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDK 571
Query: 230 LDQGKLVHQYIECK 243
+L+ + C+
Sbjct: 572 AASAELIKEMRSCR 585
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 16/261 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+E D +T +++ + K + F + + +KLG++ D + L++ F G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A + D D++ + LING SEAL +M G D +T
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 116 VLRAAAMAGDDNFG----KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
VL +G+ + + ++A VQ +S ++D K G DDA +F+E
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQ-----YSIVIDSLCKDGSFDDALSLFNE 270
Query: 172 MPYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
M DVV +S L+ G K+ D ++ M+ N++P+ T ++++ G
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 230 LDQGKLVHQYIECKKVSLNSV 250
L + K ++ + + ++ +++
Sbjct: 331 LLEAKELYNEMITRGIAPDTI 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 54/302 (17%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+Q+ PD T L+ + K V + ++ ++ + GF D +++ SG
Sbjct: 169 MKQR---PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 60 IGSACQVF---DESSVK-DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A +F +E ++K ++ ++ +I+ K+ +AL F +M G D +T S
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 116 VLRAAAMAGDDNFGKWVHG---FYVQAGR-VQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
++ G N GKW G GR + D +SAL+D++ K G +A ++++E
Sbjct: 286 LI-----GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 172 M--------PYSYR-----------------------------DVVCWSVLVAGYVQCNK 194
M +Y D+V +S+L+ Y + +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGT 254
D +R+F + S ++PN T +++ SG L+ K + Q + + V + V G
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 255 AL 256
L
Sbjct: 461 LL 462
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 44/285 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + + PD TF L+ +F K + + +Y ++ G D N+LI F
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A Q+FD K DI+ ++ LIN Y K + ++ F ++ S G + +T +
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ +G N K + V G V + L+D G + A ++F++M S
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRG-VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 176 YR-------------------------------------DVVCWSVLVAGYVQCNKFQDA 198
DVV ++V++ G + +A
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 199 IRVFWNMLSDNVVPNEFTLTSVLSA-CAHSGALDQGKLVHQYIEC 242
+F M D P++FT ++ A SG + +L+ + C
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 111/247 (44%), Gaps = 8/247 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ PD +T+ L+ + + ++ ++ ++ GF D+ NAL+ + S
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A +V +E + I+ + +LI+ Y ++ + EA++ +M GT D T +
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+L AG + AG + + ++A + MY G + K+FDE+
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D+V W+ L+A + Q + VF M VP T +++SA + G+ +Q
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 234 KLVHQYI 240
V++ +
Sbjct: 509 MTVYRRM 515
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVF---DESSVK-DIIAWTALINGYVKNDLPSEA 94
GF LD ++ +LISAFANSG A VF +E K +I + ++N + K P
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 95 LKCFV-KMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALM 153
+ V KM+S G DA T +++ V AG D ++AL+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAG-FSYDKVTYNALL 321
Query: 154 DMYFKCGHCDDACKVFDEMPYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVV 211
D+Y K +A KV +EM + +V ++ L++ Y + +A+ + M
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 212 PNEFTLTSVLSACAHSGALD 231
P+ FT T++LS +G ++
Sbjct: 382 PDVFTYTTLLSGFERAGKVE 401
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 46/248 (18%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +KG +PD T+ LL F + VE I+ ++ G + NA I + N G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 60 IGSACQVFDESSV----KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
++FDE +V DI+ W L+ + +N + SE F +M+ G + T
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET--- 491
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ L+ Y +CG + A V+ M +
Sbjct: 492 ---------------------------------FNTLISAYSRCGSFEQAMTVYRRMLDA 518
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D+ ++ ++A + ++ + +V M PNE T S+L A A+ +
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG-- 576
Query: 234 KLVHQYIE 241
L+H E
Sbjct: 577 -LMHSLAE 583
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 117/265 (44%), Gaps = 16/265 (6%)
Query: 3 QKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
++G+EP T+ L+ F K + F +Y + K+G+ D L+ + G +
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 62 SA----CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
A ++ +S +++ + +LI+G+ + + EALK F M G D T +V+
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 118 RAAAMAGDDNFGKWVHGF-------YVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFD 170
R + M +D F K + +Q ++ D V + ++ + FKC +DA K F+
Sbjct: 539 RVSIM--EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 596
Query: 171 EMPYSYR--DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
+ D+V ++ ++ GY + +A R+F + PN TLT ++ +
Sbjct: 597 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 656
Query: 229 ALDQGKLVHQYIECKKVSLNSVELG 253
+D + + K N+V G
Sbjct: 657 DMDGAIRMFSIMAEKGSKPNAVTYG 681
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q+G+EPD + L+ F ++ +++Q G LD ++ I + SG
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 60 IGSACQVFD----ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ +A V+ + +++ +T LI G ++ EA + ++ G +T S
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM-PY 174
++ G+ G ++ ++ G D ++ L+D K G A + +M
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPP-DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 175 SYR-DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
S R +VV ++ L+ G+ + N+F +A++VF M + P+ T T+V+
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 122/265 (46%), Gaps = 9/265 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KG+ + +T +++ F + + F +I KLG++ + + LI+ G
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A ++ D D+I L+NG + +EA+ KM G +A+T
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
VL +G + ++ ++LD +S ++D K G D+A +F+EM
Sbjct: 234 VLNVMCKSGQTALAMELLR-KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+++ +++L+ G+ ++ D ++ +M+ + PN T + ++ + G L +
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 234 KLVHQYIECKKVSLNSVELGTALVD 258
+ +H+ + + ++ +++ T+L+D
Sbjct: 353 EELHKEMIHRGIAPDTITY-TSLID 376
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 108/248 (43%), Gaps = 8/248 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++ + P+ TF +L+ F K + + ++ ++ G D +LI F
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A Q+ D K +I + LINGY K + + L+ F KM G D +T +
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+++ G N K + V + +V + + L+D G + A ++F+++ S
Sbjct: 444 LIQGFCELGKLNVAKELFQEMV-SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 176 YR--DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D+ +++++ G +K DA +F ++ V P T ++ G L +
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 234 KLVHQYIE 241
+L+ + +E
Sbjct: 563 ELLFRKME 570
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 46/266 (17%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVV-EDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ GV+PD+ TF LL + S+ + E ++ ++ + D F+ N L+ A G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A ++ + VK ++++++ +I+G+ K EAL F +MR G
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG---------- 439
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+ LD ++ L+ +Y K G ++A + EM
Sbjct: 440 --------------------------IALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+DVV ++ L+ GY + K+ + +VF M ++V+PN T ++++ + G +
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 234 KLVHQYIECKKVSLNS-VELGTALVD 258
+ + E K L + V L +AL+D
Sbjct: 534 MEI--FREFKSAGLRADVVLYSALID 557
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 48 NALISAFANSGFIGSACQVFDESSV----KDIIAWTALINGYVKNDLPSEALKCFVKMRS 103
+A+IS G + A ++F+ + + A++ALI+ Y ++ L EA+ F M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 104 TGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY--VQAGRVQLDGYVWSALMDMYFKCGH 161
G + +T +V+ A G + K V F+ +Q VQ D +++L+ + + G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGME--FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 162 CDDACKVFDEMPYSY--RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
+ A +FDEM +DV ++ L+ + + A + M ++PN + ++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 220 VLSACAHSGALDQ-----GKLVHQYIECKKVSLNSV 250
V+ A +G D+ G++ + I +VS N++
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 31 IYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFD---ESSVK-DIIAWTALINGYV 86
I+ F G+ +A +ALISA+ SG A VF+ E ++ +++ + A+I+
Sbjct: 255 IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG 314
Query: 87 KNDLP-SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY--VQAGRVQ 143
K + + K F +M+ G D +T S+L + G + + + R++
Sbjct: 315 KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG---LWEAARNLFDEMTNRRIE 371
Query: 144 LDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY--RDVVCWSVLVAGYVQCNKFQDAIRV 201
D + ++ L+D K G D A ++ +MP +VV +S ++ G+ + +F +A+ +
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 202 FWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
F M + + + ++LS G ++
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 41/261 (15%)
Query: 9 DQHTFPLLLKMFS---KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
D H F L LK + +PV+ ++A K F + F G AL+ + + A +
Sbjct: 47 DAHVFSLALKSCAAAFRPVLGGS--VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARK 104
Query: 66 VFDESSVKDIIAWTALINGYVK--------------NDLPSE------------------ 93
+FDE ++ + W A+I+ Y + +P+E
Sbjct: 105 LFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSY 164
Query: 94 -ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSAL 152
A++ + KM + +T+++++ A + G K +H Y ++ + S L
Sbjct: 165 RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHS-YAFRNLIEPHPQLKSGL 223
Query: 153 MDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
++ Y +CG VFD M RDVV WS L++ Y + A++ F M V P
Sbjct: 224 VEAYGRCGSIVYVQLVFDSM--EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTP 281
Query: 213 NEFTLTSVLSACAHSGALDQG 233
++ +VL AC+H+G D+
Sbjct: 282 DDIAFLNVLKACSHAGLADEA 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 70 SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRST-GTGVDALTVVSVLRAAAMAGDDNF 128
SS +I+ T ++ Y +AL F++M S+ +DA L++ A A
Sbjct: 7 SSCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL 66
Query: 129 GKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAG 188
G VH V++ + + +V AL+DMY KC A K+FDE+P R+ V W+ +++
Sbjct: 67 GGSVHAHSVKSNFLS-NPFVGCALLDMYGKCLSVSHARKLFDEIP--QRNAVVWNAMISH 123
Query: 189 YVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVL 221
Y C K ++A+ ++ M +V+PNE + +++
Sbjct: 124 YTHCGKVKEAVELYEAM---DVMPNESSFNAII 153
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTG 107
+ L+ A+ G I VFD +D++AW++LI+ Y + ALK F +M
Sbjct: 221 SGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVT 280
Query: 108 VDALTVVSVLRAAAMAGDDN----FGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCD 163
D + ++VL+A + AG + + K + G Y R D Y S L+D+ + G +
Sbjct: 281 PDDIAFLNVLKACSHAGLADEALVYFKRMQGDY--GLRASKDHY--SCLVDVLSRVGRFE 336
Query: 164 DACKVFDEMP 173
+A KV MP
Sbjct: 337 EAYKVIQAMP 346
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 121/265 (45%), Gaps = 9/265 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KG+ + +T +++ + + F +I KLG++ D + LI+ G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A ++ D +I AL+NG N S+A+ +M TG + +T
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
VL+ +G + ++ +++LD +S ++D K G D+A +F+EM
Sbjct: 218 VLKVMCKSGQTALAMELLR-KMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D++ ++ L+ G+ ++ D ++ +M+ + P+ ++++ G L +
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 234 KLVHQYIECKKVSLNSVELGTALVD 258
+ +H+ + + +S ++V T+L+D
Sbjct: 337 EELHKEMIQRGISPDTVTY-TSLID 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 8/248 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++ + PD F L+ F K + + ++ ++ + G D +LI F
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A + D K +I + LINGY K +L + L+ F KM G D +T +
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+++ G K + V + RV+ D + L+D G + A ++F+++ S
Sbjct: 428 LIQGFCELGKLEVAKELFQEMV-SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS 486
Query: 176 YR--DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D+ +++++ G +K DA +F ++ V P+ T ++ G+L +
Sbjct: 487 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 234 KLVHQYIE 241
L+ + +E
Sbjct: 547 DLLFRKME 554
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 117/235 (49%), Gaps = 12/235 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR +G+ P++ T+ L+ FS K + + + + ++ GF NALI+ +G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A V ++ K D+++++ +++G+ ++ EAL+ +M G D +T S
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQL--DGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+++ + K Y + RV L D + ++AL++ Y G + A ++ +EM
Sbjct: 491 LIQGFC---EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 174 YS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
DVV +SVL+ G + ++ ++A R+ + + VP++ T +++ C++
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 115/260 (44%), Gaps = 14/260 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KG P+ T+ L+ + K ++D F + + G + + + N +I+ G
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ V E + + D + + LI GY K +AL +M G +T S
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQ---LDGYVWSALMDMYFKCGHCDDACKVFDEM 172
++ + AG+ N ++ RV+ + ++ L+D + + G+ ++A +V EM
Sbjct: 351 LIHSMCKAGNMNRAME----FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 173 PYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
+ VV ++ L+ G+ K +DAI V +M + P+ + ++VLS S +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 231 DQGKLVHQYIECKKVSLNSV 250
D+ V + + K + +++
Sbjct: 467 DEALRVKREMVEKGIKPDTI 486
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 115/241 (47%), Gaps = 8/241 (3%)
Query: 5 GVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G+ + +T+ +L+ F + + + ++ KLG++ D N+L++ F + I A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 64 CQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ D+ D + +T LI+G ++ SEA+ +M G D +T +V+
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YR 177
GD + + ++A +++ + ++S ++D K H DDA +F EM
Sbjct: 228 LCKRGDTDLALNLLN-KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 178 DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVH 237
+V+ +S L++ ++ DA R+ +M+ + PN T ++++ A G L + + ++
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 238 Q 238
+
Sbjct: 347 E 347
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 117/267 (43%), Gaps = 16/267 (5%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G +PD TF L+ +F + + ++ + G D A+++ G
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A + ++ +++ ++ +I+ K +AL F +M + G + +T S
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAG----RVQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
++ N+G+W + + ++ + +SAL+D + K G A K+++E
Sbjct: 294 LISCLC-----NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 172 MPYSYRD--VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
M D + +S L+ G+ ++ +A ++ M+ + +PN T ++++ +
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 230 LDQGKLVHQYIECKKVSLNSVELGTAL 256
+D+G + + + + + N+V T +
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLI 435
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 114/245 (46%), Gaps = 8/245 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ D +T+ + + F + + + A++ KLG++ D ++L++ + +S
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A + D+ D +T LI+G ++ SEA+ +M G D +T +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ GD + + ++A R++ + +++ ++D K H + A +F EM
Sbjct: 229 VVNGLCKRGDIDLALNLLN-KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+VV ++ L+ ++ DA R+ NML + PN T +++ A G L +
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 234 KLVHQ 238
+ +H+
Sbjct: 348 EKLHE 352
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 42/263 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP--VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M +K + P+ TF L+ F K +VE ++ ++ + D D N LI+ F
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAE-KLHEEMIQRSIDPDTITYNLLINGFCMHN 377
Query: 59 FIGSACQVFDESSVKD----IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
+ A Q+F KD I + LING+ K + ++ F +M G + +T
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 115 SVLRAAAMAGDDNFGKWV--------------------HGF--------------YVQAG 140
++++ AGD + + V HG Y+Q
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIR 200
++L+ ++++ +++ K G +A +F + DVV ++ +++G Q+A
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK-PDVVTYNTMISGLCSKRLLQEADD 556
Query: 201 VFWNMLSDNVVPNEFTLTSVLSA 223
+F M D +PN T +++ A
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRA 579
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 120/267 (44%), Gaps = 16/267 (5%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G +PD TF L+ +F + + Q+ + G D +++ G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 60 IGSACQVFDE---SSVK-DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A + ++ + +K +++ + +I+ K A+ F +M + G + +T S
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAG----RVQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
++ N+G+W + + ++ + ++AL+D +FK G +A K+ +E
Sbjct: 299 LINCLC-----NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 172 MPYSY--RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
M D + +++L+ G+ N+ +A ++F M+S + +PN T ++++
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 230 LDQGKLVHQYIECKKVSLNSVELGTAL 256
++ G + + + + + N+V T +
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTII 440
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 115/247 (46%), Gaps = 19/247 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVV--EDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M++ PD T+ ++L++ + V F +Y ++ K + + L+ G
Sbjct: 153 MKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 59 FIGSACQVFDESSVKDI----IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
A ++FD+ + + I + +T LI+G + +A K F +M+++G D
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD----- 267
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-----WSALMDMYFKCGHCDDACKVF 169
SV A + G G+ V F + + DG+V +S+L+D F+ A +++
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFEL-LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELY 326
Query: 170 DEMPYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
M D++ +++L+ G + K +DA+++ +M S + P+ + +V+ A
Sbjct: 327 ANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR 386
Query: 228 GALDQGK 234
G L++G+
Sbjct: 387 GLLEEGR 393
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 15/162 (9%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
D + LI+ Y K + +A++ F +M+ D T +LR M ++ F
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR--VMMREEVFFMLAF 183
Query: 134 GFYVQAGRVQLDG--YVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVVCWSVLVAGY 189
Y + + Y + LMD +K G DA K+FD+M + V +++L++G
Sbjct: 184 AVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGL 243
Query: 190 VQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
Q DA ++F+ M + P+ + AH+ LD
Sbjct: 244 CQRGSADDARKLFYEMQTSGNYPD---------SVAHNALLD 276
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 118/242 (48%), Gaps = 17/242 (7%)
Query: 7 EPDQHTFPL-------LLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
E + FP+ L+K F K +VE+ ++ ++ + G + + N L++ ++
Sbjct: 177 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 59 FIGSACQVFD---ESSVK-DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
F+ SA +VF+ +K DI+ + +I GY K +A++ M + G D +T +
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGR-VQLDGYVWSALMDMYFKCGHCDDACKVFDEM- 172
++++A D +FG V + + +Q+ + +S ++ K G ++ VF+ M
Sbjct: 297 TMIQACY--ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMI 354
Query: 173 -PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
S +V ++VL+ GY + +DAIR+ M+ + P+ T + V++ +G ++
Sbjct: 355 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 232 QG 233
+
Sbjct: 415 EA 416
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 110/238 (46%), Gaps = 9/238 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +KG++ H F L++ K + + + ++ + + G + LI +A SG
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 60 IGSACQVF----DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A ++ DE D++ ++ ++NG KN EAL F R G ++++ S
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ AG + + + + G + D Y ++AL+D + K D+A +F M
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTR-DSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Query: 176 Y---RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
+ V +++L++G + ++ ++A++++ M+ + P ++ + SG +
Sbjct: 497 EGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKV 554
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 117/244 (47%), Gaps = 8/244 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ + +T+ +L+ F + + + ++ KLG++ + ++L++ + +S
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A + D+ V + + + LI+G ++ SEA+ +M + G D +T
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ GD + + ++ G+++ +++ ++D K H DDA +F EM
Sbjct: 227 VVNGLCKRGDTDLAFNLLN-KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+VV +S L++ ++ DA R+ +M+ + P+ FT ++++ A G L +
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 234 KLVH 237
+ ++
Sbjct: 346 EKLY 349
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 47/255 (18%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KG+ P+ T+ L+ + + D + + + + + D F +ALI AF G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A +++DE S I+ +++LING+ +D EA + F M S D +T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT--- 398
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ L+ + K ++ +VF EM S
Sbjct: 399 ---------------------------------YNTLIKGFCKYKRVEEGMEVFREM--S 423
Query: 176 YR----DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
R + V +++L+ G Q A +F M+SD V PN T ++L +G L+
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483
Query: 232 QGKLVHQYIECKKVS 246
+ +V +Y++ K+
Sbjct: 484 KAMVVFEYLQRSKME 498
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 9/246 (3%)
Query: 3 QKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
Q G PDQ+TF L+ K V+ I + + G+D D + N++IS G +
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 62 SACQVFDESSVKD----IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
A +V D+ +D + + LI+ K + EA + + S G D T S++
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS-- 175
+ + + + G + D + ++ L+D G D+A + +M S
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA-CAHSGALDQGK 234
R V+ ++ L+ G+ + NK ++A +F M V N T +++ C D +
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 235 LVHQYI 240
L+ Q I
Sbjct: 527 LMDQMI 532
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 20/225 (8%)
Query: 1 MRQKGVEPDQHTFPLLL-KMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR KG EPD+ T+ +L+ + SK +++ + Q+ G N LI F +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 60 IGSACQVFDESSV----KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A ++FDE V ++ + + LI+G K+ +A + +M G D T S
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM--- 172
+L GD + G + D + L+ K G + A K+ +
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNG-CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 173 -----PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
P++Y V + G + K +AI +F ML N P
Sbjct: 605 GINLTPHAYNPV------IQGLFRKRKTTEAINLFREMLEQNEAP 643
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++ +EP+ TF L+ F K + + +Y + ++ D F +LI+ G
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 60 IGSACQVF----DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A Q+F + + +T LI+G+ K+ + +K F +M G + +T
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+++ + G + + V + + R D ++ L+D G + A +F+ M
Sbjct: 369 LIQGYCLVGRPDVAQEVFN-QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 176 YRDV--VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D+ V +++++ G + K +DA +F ++ S + PN T T+++S G + +
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 108/251 (43%), Gaps = 8/251 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G EPD TF LL + +ED ++ QI +GF + LI +
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A ++F++ S +++ + AL+ G + +A M + +T +
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ A G K ++ +Q V D + + +L++ G D+A ++F M +
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMS-VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
Y + V ++ L+ G+ + + +D +++F+ M VV N T T ++ G D
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 234 KLVHQYIECKK 244
+ V + ++
Sbjct: 383 QEVFNQMSSRR 393
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 21 SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE----SSVKDII 76
S+P F+ ++ KLGF+ D +L++ + + I A +FD+ +++
Sbjct: 132 SQPCRASCFL--GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVV 189
Query: 77 AWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY 136
+T LI KN + A++ F +M + G+ + +T A + G G+W +
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY-----NALVTGLCEIGRWGDAAW 244
Query: 137 V----QAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVVCWSVLVAGYV 190
+ R++ + ++AL+D + K G +A ++++ M Y DV + L+ G
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 191 QCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSV 250
+A ++F+ M + PNE T+++ S ++ G + + K V N++
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ + +T+ + + F + + I ++ KLG+ N+L++ F +
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A + D+ D + +T L++G +++ SEA+ +M G D +T +
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ G+ + + ++ G+++ D +++ ++D K H DDA +F++M
Sbjct: 221 VINGLCKRGEPDLALNLLN-KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL-DQ 232
DV ++ L++ ++ DA R+ +ML N+ P+ +++ A G L +
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 233 GKLVHQYIECK 243
KL + ++ K
Sbjct: 340 EKLYDEMVKSK 350
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 1 MRQKGVEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KG++PD T+ PL+ + + D + + + + + D NALI AF G
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 60 IGSACQVFDE-----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
+ A +++DE D++A+ LI G+ K E ++ F +M G + +T
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+++ A D + + V V G V D ++ L+D G+ + A VF+ M
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDG-VHPDIMTYNILLDGLCNNGNVETALVVFEYMQK 454
Query: 175 S--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
D+V ++ ++ + K +D +F ++ V PN T T+++S G ++
Sbjct: 455 RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514
Query: 233 GKLVHQYIECKK 244
+ ++E K+
Sbjct: 515 ADAL--FVEMKE 524
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M GV PD T+ +LL + + VE +++ + K LD +I A +G
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ +F S+K +++ +T +++G+ + L EA FV+M+ G ++ T +
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536
Query: 116 VLRAAAMAGDD 126
++RA GD+
Sbjct: 537 LIRARLRDGDE 547
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 111/257 (43%), Gaps = 8/257 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KG+ +T +++ F + + F +I KLG++ D N L++
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A ++ D +I L+NG N S+A+ +M TG + +T
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
VL +G + ++ ++LD +S ++D K G D+A +F+EM
Sbjct: 234 VLNVMCKSGQTALAMELLR-KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D++ ++ L+ G+ ++ D ++ +M+ + PN T + ++ + G L +
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 234 KLVHQYIECKKVSLNSV 250
+ + + + ++ N++
Sbjct: 353 DQLLKEMMQRGIAPNTI 369
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M ++ + P+ TF +L+ F K + + + ++ + G + N+LI F
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A Q+ D K DI+ + LINGY K + + L+ F +M G + +T +
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+++ +G K + V + RV+ D + L+D G + A ++F ++ S
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMV-SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 176 YR--DVVCWSVLVAGYVQCNKFQDAIRVFWNM 205
D+ + +++ G +K DA +F ++
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 107/240 (44%), Gaps = 15/240 (6%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVF---DESSVK-DIIAWTA 80
V D ++ ++ + GF + +++ SG A ++ +E ++K D + ++
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 81 LINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQ-- 138
+I+G K+ A F +M G D +T +++ G N G+W G +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI-----GGFCNAGRWDDGAKLLRD 323
Query: 139 --AGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVVCWSVLVAGYVQCNK 194
++ + +S L+D + K G +A ++ EM + + ++ L+ G+ + N+
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGT 254
++AI++ M+S P+ T +++ + +D G + + + + V N+V T
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM----IYAQIFKLGFDLDRFAGNALISAFAN 56
M ++ ++PD TF L+ F K E F+ +Y ++ ++ + F +LI+ F
Sbjct: 238 MTKRKIKPDVITFNALIDAFVK---EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 57 SGFIGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT 112
G + A Q+F K D++A+T+LING+ K +A+K F +M G + +T
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 113 VVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
++++ G N + V V G V + ++ L+ G A +F++M
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 173 PYSYRDVVC-----WSVLVAGYVQCNKFQDAIRVFWNM 205
D V ++VL+ G K + A+ VF +M
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 38 LGFDLDRFAGNALISAFANSG-------FIGSACQVFDESSVKDIIAWTALINGYVKNDL 90
+G D + N L++ F S F+G ++ E DI+ +T+LING+ +
Sbjct: 101 MGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEP---DIVTFTSLINGFCLGNR 157
Query: 91 PSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWS 150
EA+ +M G D + +++ + G N+ + G ++ D +++
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG-IRPDVVMYT 216
Query: 151 ALMDMYFKCGHCDDACKVFDEMPYSY--RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSD 208
+L++ G DA + M DV+ ++ L+ +V+ KF DA ++ M+
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 209 NVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
++ PN FT TS+++ G +D+ + + +E K
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 116/257 (45%), Gaps = 8/257 (3%)
Query: 3 QKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
++G+EP T+ L+ F K + F +Y + K+G+ D L+ + G +
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 62 SA----CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
A ++ +S +++ + +LI+G+ + + EALK F M G D T +V+
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY- 176
R + M G ++ + G ++ D + L+D + K ++FD M +
Sbjct: 539 RVSIMEGRLEEALFLFFRMFKMG-LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 177 -RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
D+ +V++ +C++ +DA + F N++ + P+ T +++ LD+ +
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657
Query: 236 VHQYIECKKVSLNSVEL 252
+ + ++ N+V L
Sbjct: 658 IFELLKVTPFGPNTVTL 674
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q+G+EPD + L+ F ++ +++Q G LD ++ I + SG
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 60 IGSACQVFD----ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ +A V+ + +++ +T LI G ++ EA + ++ G +T S
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM-PY 174
++ G+ G ++ ++ G D ++ L+D K G A + +M
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPP-DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 175 SYR-DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
S R +VV ++ L+ G+ + N+F +A++VF M + P+ T T+V+ G L++
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G EPD T+ +LL + +++ + A++ + G LD ++ N L+
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 60 IGSACQVFDESSVK-----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
C F ++ D+++++ LI + + +A + F +MR G ++ +T
Sbjct: 306 -PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
S+++A G+ + K + + G + D ++ ++D K G+ D A VF++M
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELG-LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 175 S--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
D + ++ L++G + + +AI++F +M P+E T ++ G L +
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII------GGLIR 477
Query: 233 GK 234
GK
Sbjct: 478 GK 479
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q+G EPD ++ +L+ +F V D I+ + + G D A AL+ ++
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 60 IGSACQVFDE----SSVK-DIIAWTALINGYVKNDL--PSEALKCFVKMRSTGTGVDALT 112
+ A ++ E + VK + + ALI+G+ K +EALK + M G D +T
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSY--MSKIGCEPDLVT 257
Query: 113 VVSVLRAAAMAGDDNFGKWVHGFYVQAGR--VQLDGYVWSALMDMYFKCGHCDDACKVF- 169
+L D+N K G + R +QLD Y ++ L+ + + H D C F
Sbjct: 258 YNVLLNYYY---DNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH-PDKCYNFM 313
Query: 170 -DEM-PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHS 227
EM P + DVV +S L+ + + + + A R+F M +V N T TS++ A
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 228 G 228
G
Sbjct: 374 G 374
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 4 KGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGS 62
+ PD+ T+ ++ F + +++ + A++ ++G +R N L+ + I
Sbjct: 446 RNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDR 505
Query: 63 ACQVFDESSV-----KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
A + E + D++++ +I+G + D + AL F +MR+ G ++ +++
Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS-- 175
+A AM+G V + RV++D W+ L++ Y + G +DA +V M +
Sbjct: 566 KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
Y +V + L G Q K DA+ + W + +
Sbjct: 626 YPNVATYGSLANGVSQARKPGDAL-LLWKEIKER 658
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 17/255 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAG----NALISAFAN 56
M ++ ++PD T+ L+ F + D Q+F+ D F N LI F
Sbjct: 356 MIKRSIDPDIFTYNSLVNGF---CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 57 SGFIGSACQVFDESS----VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT 112
S + ++F E S V D + +T LI G + A K F +M S G D +T
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 113 VVSVLRAAAMAGDDNFGKWVHGF-YVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
+L + + K + F Y+Q ++LD Y+++ +++ K G DD +F
Sbjct: 473 YSILL--DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 172 MPYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG- 228
+ +VV ++ +++G Q+A + M D +PN T +++ A G
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 229 ALDQGKLVHQYIECK 243
+L+ + C+
Sbjct: 591 KAASAELIREMRSCR 605
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 11 HTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDE 69
+T+ +L+ F + + + ++ KLG++ ++L++ + + I A + D+
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 70 ----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD 125
D I +T LI+G ++ SEA+ +M G + +T V+ GD
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 126 DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVVCWS 183
+ + ++A +++ D +++ ++D K H DDA +F EM +VV +S
Sbjct: 241 TDLALNLLN-KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 184 VLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
L++ ++ DA ++ +M+ + PN T +++ A G
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 8/255 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +E D F ++ K V+D ++ ++ G + ++LIS + G
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 60 IGSACQVFDESSVKDI----IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A Q+ + K I + + ALI+ +VK EA K + M D T S
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ M + K + F V D ++ L+ + K +D ++F EM +
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D V ++ L+ G +A +VF M+SD V P+ T + +L ++G L++
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 234 KLVHQYIECKKVSLN 248
V Y++ ++ L+
Sbjct: 490 LEVFDYMQKSEIKLD 504
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 111/247 (44%), Gaps = 12/247 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ KGV+ D T+ +L+ + + +++ + K + N LI+ F+N G
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A Q+ +E + + + ALI+G++ EALK F M + G ++
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGR--VQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+L + + + GFY++ R V + ++ ++D K G D+A + +EM
Sbjct: 414 LLDGLCKNAEFDLAR---GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 174 YSY--RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
D+V +S L+ G+ + +F+ A + + + PN ++++ C G L
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530
Query: 232 QGKLVHQ 238
+ +++
Sbjct: 531 EAIRIYE 537
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 121/265 (45%), Gaps = 12/265 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR KG +P+ +++ +L+ F K +++ + + ++ G + N LISAF
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A ++F E K D+ + +LI+G + D AL M S G + +T +
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 116 VLRAAAMAGD-DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM-- 172
++ A G+ K V+ Q LD +++L+ + G D A +F++M
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGS--PLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 173 -PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
++ ++ C ++L+ G + ++A+ M+ P+ T S+++ +G ++
Sbjct: 593 DGHAPSNISC-NILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 232 QGKLVHQYIECKKVSLNSVELGTAL 256
G + + ++ + + ++V T +
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 48 NALISAFANSGFIGSACQVFDE-----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMR 102
N LI F G + A V + V D+ + +LI GY K L AL+ MR
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 103 STGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYV----QAGRVQLDGYVWSALMDMYFK 158
+ G + + ++ G GK + V A ++ + ++ L+ + K
Sbjct: 417 NKGCKPNVYSYTILV-----DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 159 CGHCDDACKVFDEMPYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFT 216
+A ++F EMP DV ++ L++G + ++ + A+ + +M+S+ VV N T
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 217 LTSVLSACAHSGALDQG-KLVHQYI 240
++++A G + + KLV++ +
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMV 556
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 25/259 (9%)
Query: 1 MRQKGVEPDQHTFPLLLKMF--------SKPVVEDPFMIYAQIFKLGFDLDRFAGNALIS 52
M ++ ++PD T+ L+ F +K + E FM+ F DLD + N LI
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE--FMVSKDCFP---DLDTY--NTLIK 333
Query: 53 AFANSGFIGSACQVFDESS----VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGV 108
F S + ++F E S V D + +T LI G + A K F +M S G
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 109 DALTVVSVLRAAAMAGDDNFGKWVHGF-YVQAGRVQLDGYVWSALMDMYFKCGHCDDACK 167
D +T +L + + K + F Y+Q ++LD Y+++ +++ K G DD
Sbjct: 394 DIMTYSILL--DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 168 VFDEMPYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACA 225
+F + +VV ++ +++G Q+A + M D +P+ T +++ A
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 226 HSG-ALDQGKLVHQYIECK 243
G +L+ + C+
Sbjct: 512 RDGDKAASAELIREMRSCR 530
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 10/256 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +E D F ++ K V+D ++ ++ G + ++LIS + G
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 60 IGSACQVFDESSVKDI----IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A Q+ + K I + + ALI+ +VK EA K M D T S
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRV-QLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
++ M + K + F V LD Y + L+ + K +D ++F EM +
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY--NTLIKGFCKSKRVEDGTELFREMSH 353
Query: 175 S--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
D V ++ L+ G +A +VF M+SD V P+ T + +L ++G L++
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 233 GKLVHQYIECKKVSLN 248
V Y++ ++ L+
Sbjct: 414 ALEVFDYMQKSEIKLD 429
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 112/264 (42%), Gaps = 42/264 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G+ + +T+ +L+ F + + + ++ KLG++ ++L++ + +
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A + D+ D I +T LI+G ++ SEA+ +M G + +T
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ GD + + ++A +++ D +++ ++D K H DD
Sbjct: 156 VVNGLCKRGDIDLAFNLLN-KMEAAKIEADVVIFNTIIDSLCKYRHVDD----------- 203
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA-CAHSGALDQGK 234
A+ +F M + + PN T +S++S C++ D +
Sbjct: 204 ----------------------ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 235 LVHQYIECKKVSLNSVELGTALVD 258
L+ IE KK++ N V AL+D
Sbjct: 242 LLSDMIE-KKINPNLVTF-NALID 263
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 110/237 (46%), Gaps = 8/237 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G+ + +T+ +L+ F + + + ++ KLG++ ++L++ + +
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A + D+ D I +T LI+G ++ SEA+ +M G + +T
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ GD + + ++A +++ + ++S ++D K H DDA +F EM
Sbjct: 231 VVNGLCKRGDIDLAFNLLN-KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL 230
+V+ +S L++ ++ DA R+ +M+ + PN T +++ A G L
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 47/255 (18%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KGV P+ T+ L+ + + D + + + + + + NALI AF G
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A +++DE S DI +++LING+ +D EA F
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF----------------- 388
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
M D F V ++ L++ + K D+ ++F EM S
Sbjct: 389 ----ELMISKDCFPNVV---------------TYNTLINGFCKAKRIDEGVELFREM--S 427
Query: 176 YR----DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
R + V ++ L+ G+ Q +A VF M+SD V PN T ++L +G L+
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 232 QGKLVHQYIECKKVS 246
+ +V +Y++ K+
Sbjct: 488 KAMVVFEYLQRSKME 502
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 78 WTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYV 137
++ LI+G K EA+ + KM G + + ++ G N K + +
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 138 QAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVVCWSVLVAGYVQCNKF 195
+G + + Y +S+LM +FK G C++A +V+ EM + R+ C+SVL+ G +
Sbjct: 425 ASGCLP-NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 196 QDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG-KLVHQYI 240
++A+ V+ ML+ + P+ +S++ G++D KL H+ +
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 109/248 (43%), Gaps = 8/248 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + + P+ TF +LL +F K +++ +Y ++ G + N L+ +
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 60 IGSACQVFD----ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A + D DI+ +T+LI GY + +K F + G +A+T
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+++ +G + + V G V D + L+D G + A ++F+++ S
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHG-VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 176 YRD--VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D +V ++ ++ G + K +DA +F ++ V PN T T ++S G+L +
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 234 KLVHQYIE 241
++ + +E
Sbjct: 528 NILLRKME 535
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 3/185 (1%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVH 133
D + LI G SEA+ +M G D +T S++ +GD + +
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 134 GFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVVCWSVLVAGYVQ 191
++ V+ D + +S ++D + G D A +F EM VV ++ LV G +
Sbjct: 217 R-KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 192 CNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVE 251
K+ D + +M+S +VPN T +L G L + +++ + + +S N +
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 252 LGTAL 256
T +
Sbjct: 336 YNTLM 340
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 126/331 (38%), Gaps = 76/331 (22%)
Query: 5 GVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G EPD TF L+K +F + V + ++ ++ + G D N++++ SG A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 64 CQVF---DESSVK-DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
+ +E +VK D+ ++ +I+ ++ A+ F +M + G +T S++R
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 120 AAMAGDDNFGKWVHG-------------------FYVQAGRVQ----------------- 143
AG N G + +V+ G++Q
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 144 -------LDGY--------------------------VWSALMDMYFKCGHCDDACKVFD 170
+DGY +++L+ Y DD KVF
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 171 EMPYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
+ + V +S+LV G+ Q K + A +F M+S V+P+ T +L +G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 229 ALDQGKLVHQYIECKKVSLNSVELGTALVDM 259
L++ + + ++ K+ L V T + M
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 120/259 (46%), Gaps = 14/259 (5%)
Query: 5 GVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
GV P+ T+ +L+KM K E ++K GF D F+ + +I+ A +G + A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 64 CQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
++FDE S + D+ + LI+G++K A++ + ++ + + +++ +
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 120 A-AMAG--DDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY 176
+ G DD W ++ + D Y +S+L+ G+ D A VF+E+
Sbjct: 264 GLSKCGRVDDCLKIWER---MKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 177 R--DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK 234
DVV ++ ++ G+ +C K ++++ + W ++ N + ++ +G +D+
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNSVNIVSYNILIKGLLENGKIDEAT 379
Query: 235 LVHQYIECKKVSLNSVELG 253
++ + + K + + G
Sbjct: 380 MIWRLMPAKGYAADKTTYG 398
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 10/251 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M G+ D ++F +L+ F + + + ++ KLG++ +L+ F
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 60 IGSACQVF----DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
IG A + +++ + LI+G KN + AL+ +M G G D +T +
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 116 VLRAAAMAGD-DNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
+L +G + + + ++ + D ++AL+D++ K G+ D+A +++ EM
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRS--INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 175 SYRDV--VCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
S D V ++ ++ G + DA + F M S PN T +++S +D+
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 233 GKLVHQYIECK 243
G + Q + C+
Sbjct: 335 GMKLFQRMSCE 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G EP+ + L+ K + + ++ K G D N L++ SG
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A ++ + S D++ +TALI+ +VK EA + + +M + + +T S
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ M G K G + ++ L+ + K D+ K+F M
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFP-NVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D+ ++ L+ GY Q K + A+ +F M+S V P+ T +L +G ++
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 74 DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGD--DNFGKW 131
D+ ++T LI+ + + S AL KM G +T S+L + D F
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 132 VHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY--RDVVCWSVLVAGY 189
+ V++G + + V++ L+D K G + A ++ +EM DVV ++ L+ G
Sbjct: 165 I--LMVKSG-YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 190 VQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGK-----LVHQYIECKK 244
++ DA R+ +M+ ++ P+ T T+++ G LD+ + ++ ++
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 245 VSLNSV 250
V+ NS+
Sbjct: 282 VTYNSI 287
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 106/252 (42%), Gaps = 43/252 (17%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR +G++PD T+ LL + + + ++ M++ + G D + L+ F
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ C + E S+ DI ++ L+ Y K+ EA+ F +M++ G +A T
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT--- 354
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+S L++++ + G DD ++F EM S
Sbjct: 355 ---------------------------------YSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 176 YRD--VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D +++L+ + + F++ + +F +M+ +N+ P+ T ++ AC G +
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 234 KLVHQYIECKKV 245
+ + QY+ +
Sbjct: 442 RKILQYMTANDI 453
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 86/224 (38%), Gaps = 43/224 (19%)
Query: 50 LISAFANSGFIGSACQVFDESSV----KDIIAWTALINGYVKNDLPSEALK--------- 96
+IS G + +VFDE + + ++TALIN Y +N +L+
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 97 ---------------------------CFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFG 129
F +MR G D +T ++L A A+ G +
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 130 KWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY--SYRDVVCWSVLVA 187
+ V G V D +S L++ + K + C + EM S D+ ++VL+
Sbjct: 267 EMVFRTMNDGGIVP-DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLE 325
Query: 188 GYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
Y + ++A+ VF M + PN T + +L+ SG D
Sbjct: 326 AYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 8/241 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G EPD+ T L+ F + V D + ++ ++G+ D A NA+I + +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A F E K +++ +TAL+NG + S+A + M + +T +
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+L A G K + V+ + D +S+L++ D+A ++FD M
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
DVV ++ L+ G+ + + +D +++F M +V N T +++ +G +D+
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 234 K 234
+
Sbjct: 385 Q 385
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 111/241 (46%), Gaps = 12/241 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M +K + P+ T+ LL F K V + ++ ++ ++ D D ++LI+
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 60 IGSACQVFD----ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A Q+FD + + D++++ LING+ K + +K F +M G + +T +
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKC--GHCDDACKVFDEMP 173
+++ AGD + F+ Q + +W+ + + C G + A +F++M
Sbjct: 371 LIQGFFQAGDVD---KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 174 YSYR--DVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
D+V ++ ++ G + K ++A +F ++ + P+ T T+++S G L
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 232 Q 232
+
Sbjct: 488 E 488
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 111/242 (45%), Gaps = 8/242 (3%)
Query: 7 EPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQV 66
+PD +F L FSK + D +Y + + + I F SG + A +
Sbjct: 126 KPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 67 FD----ESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAM 122
F ++ +++ +T LI+GY K A+ + +MR ++ +T +++
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 123 AGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVV 180
G+ + ++ V+ RV+ + V++ ++D +F+ G D+A K +M D+
Sbjct: 246 KGEMQRAEEMYSRMVE-DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDIT 304
Query: 181 CWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG-KLVHQY 239
+ V+++G K ++A + +M ++VP+ T++++A SG + + H+
Sbjct: 305 AYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL 364
Query: 240 IE 241
IE
Sbjct: 365 IE 366
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 116/267 (43%), Gaps = 16/267 (5%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G +PD TF L+ +F + + Q+ + G D +++ G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 60 IGSACQVFDESSV----KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A + + D++ + +I+G K +AL F +M + G D T S
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAG----RVQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
++ N+G+W + + ++ + +SAL+D + K G +A K++DE
Sbjct: 299 LISCLC-----NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 172 MPYSY--RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
M D+ +S L+ G+ ++ +A +F M+S + PN T ++++ +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 230 LDQGKLVHQYIECKKVSLNSVELGTAL 256
+++G + + + + + N+V T +
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLI 440
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 109/254 (42%), Gaps = 17/254 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAG----NALISAFAN 56
M ++ ++PD T+ L+ F + D +F+L D F + LI F
Sbjct: 354 MIKRSIDPDIFTYSSLINGF---CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 57 SGFIGSACQVFDESS----VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT 112
+ + ++F E S V + + +T LI+G+ + A F +M S G + LT
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 113 VVSVLRAAAMAGDDNFGKWVHGF-YVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDE 171
+L G K + F Y+Q ++ D Y ++ +++ K G +D ++F
Sbjct: 471 YNILLDGLCKNG--KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 172 MPYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA 229
+ +V+ ++ +++G+ + ++A + M D +PN T +++ A G
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 230 LD-QGKLVHQYIEC 242
+ +L+ + C
Sbjct: 589 REASAELIKEMRSC 602
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 113/264 (42%), Gaps = 42/264 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ D +T+ + + F + + + A++ KLG++ D ++L++ + +S
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A + D+ D +T LI+G ++ SEA+ +M G D +T +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ GD + + ++ G+++
Sbjct: 229 VVNGLCKRGDIDLALSLLK-KMEKGKIE-------------------------------- 255
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSA-CAHSGALDQGK 234
DVV ++ ++ G + DA+ +F M + + P+ FT +S++S C + D +
Sbjct: 256 -ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 235 LVHQYIECKKVSLNSVELGTALVD 258
L+ IE +K++ N V +AL+D
Sbjct: 315 LLSDMIE-RKINPNVVTF-SALID 336
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 122/302 (40%), Gaps = 51/302 (16%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M + G EPD T LL F + D + Q+ ++G+ D F N LI
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKN---DLP--------------------- 91
A + D VK D++ + ++NG K DL
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 92 -----------SEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
++AL F +M + G + +T S++R N+G+W + +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-----NYGRWSDASRLLSD 316
Query: 141 ----RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY--RDVVCWSVLVAGYVQCNK 194
++ + +SAL+D + K G +A K++DEM D+ +S L+ G+ ++
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 195 FQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSVELGT 254
+A +F M+S + PN T +++ + +D+G + + + + + N+V T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 255 AL 256
+
Sbjct: 437 LI 438
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 114/249 (45%), Gaps = 9/249 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ G+ + +T+ +L+ F + + + A++ KLG++ D N+L++ F +
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 60 IGSAC----QVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A Q+ + D + LI+G +++ SEA+ +M G D +T
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ GD + + ++ G+++ +++ ++D + +DA +F EM
Sbjct: 227 VVNGLCKRGDIDLALSLLK-KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGAL-DQ 232
+VV ++ L+ ++ DA R+ +M+ + PN T ++++ A G L +
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 233 GKLVHQYIE 241
KL + I+
Sbjct: 346 EKLYDEMIK 354
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 111/254 (43%), Gaps = 10/254 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M Q +EP + ++ + V D ++ ++ G + N+LI N G
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A ++ + + +++ ++ALI+ +VK EA K + +M D T S
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYV-WSALMDMYFKCGHCDDACKVFDEMPY 174
++ M D + H F + + V ++ L+ + K D+ ++F EM
Sbjct: 367 LINGFCM--HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 175 S--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQ 232
+ V ++ L+ G+ Q + +A VF M+SD V+P+ T + +L ++G ++
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 233 GKLVHQYIECKKVS 246
+V +Y++ K+
Sbjct: 485 ALVVFEYLQRSKME 498
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 108/254 (42%), Gaps = 15/254 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAG----NALISAFAN 56
M ++ ++PD T+ L+ F + D +F+L D F N LI F
Sbjct: 352 MIKRSIDPDIFTYSSLINGF---CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 57 SGFIGSACQVFDESS----VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT 112
+ + ++F E S V + + +T LI+G+ + A F +M S G D +T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 113 VVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
+L G V Y+Q +++ D Y ++ +++ K G +D +F +
Sbjct: 469 YSILLDGLCNNGKVETALVVFE-YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 173 PYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSG-A 229
+VV ++ +++G+ + ++A +F M + +P+ T +++ A G
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDK 587
Query: 230 LDQGKLVHQYIECK 243
+L+ + C+
Sbjct: 588 AASAELIREMRSCR 601
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 105/235 (44%), Gaps = 12/235 (5%)
Query: 1 MRQKGVEPDQHTFPLLLKMF---SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANS 57
M + G++P+ T+ + + S+ D ++ ++ + G ++ LI+ +
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYV--KEMRECGVLPNKVLCTGLINEYCKK 570
Query: 58 GFIGSACQVF----DESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTV 113
G + AC + D+ + D +T L+NG KND +A + F +MR G D +
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 114 VSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
++ + G+ + V+ G + + +++ L+ + + G + A ++ DEM
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEG-LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 174 YS--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
+ + V + ++ GY + +A R+F M +VP+ F T+++ C
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 47/251 (18%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR KG+ PD ++ +L+ FSK ++ I+ ++ + G + N L+ F SG
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 60 IGSACQVFDESSVKDI----IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A ++ DE SVK + + + +I+GY K+ +EA + F +M+ G D+ +
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 116 VL----------RAAAMAGDDNFG------------KWVHGFYVQAGRVQLDGYVWSALM 153
++ RA + G + G WV F G+ +L V + LM
Sbjct: 738 LVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKF----GKTELKTEVLNRLM 793
Query: 154 DMYF-KCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVP 212
D F + G +D V +++++ + + A +F M + N++P
Sbjct: 794 DGSFDRFGKPND---------------VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Query: 213 NEFTLTSVLSA 223
T TS+L+
Sbjct: 839 TVITYTSLLNG 849
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 112/291 (38%), Gaps = 41/291 (14%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+++ + +T+ ++K M S ++ + I ++ G + LI F +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT--- 112
G A +V E + DI + +LI G K EA V+M G +A T
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 113 -VVSVLRAAAMAGDDNFGKWVH---------------GFYVQAGRVQL------------ 144
+ + A+ A D + K + Y + G+V
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 145 ---DGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVVCWSVLVAGYVQCNKFQDAI 199
D ++ LM+ FK DDA ++F EM DV + VL+ G+ + Q A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 200 RVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSV 250
+F M+ + + PN +L SG +++ K + + K + N+V
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 22/248 (8%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR + V PD F ++ +F++ ++ M + + + G D LI + G
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A + +E D++ + +++G K + EA K F +M D+ T+
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 116 VLRAAAMAGDDNFGKWVHGFY-VQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM-- 172
++ G N + F ++ R++LD ++ L+D + K G D A +++ +M
Sbjct: 486 LIDGHCKLG--NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 173 ------PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
P SY S+LV +A RV+ M+S N+ P S++
Sbjct: 544 KEILPTPISY------SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 227 SGALDQGK 234
SG G+
Sbjct: 598 SGNASDGE 605
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 112/263 (42%), Gaps = 8/263 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFS-KPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
+++KGV PD T+ L+ +S K ++E+ F + + GF + N +I+ G
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
A +VF E D + +L+ K E K F MRS D + S
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
++ +G+ + +AG + D +++ L+ Y + G A + +EM
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIP-DNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
DVV ++ ++ G + +A ++F M + P+ +TLT ++ G L
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNA 499
Query: 234 KLVHQYIECKKVSLNSVELGTAL 256
+ Q ++ K++ L+ V T L
Sbjct: 500 MELFQKMKEKRIRLDVVTYNTLL 522
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 22/250 (8%)
Query: 1 MRQKGVEPDQHTFP----LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M++KG++P+ + + LL ++ E+ F +++ + G D LI F
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF---SEMIRQGILPDTVVYTTLIDGFCK 363
Query: 57 SGFIGSACQVFDESSVKDI----IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT 112
G I +A + F E +DI + +TA+I+G+ + EA K F +M G D++T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 113 VVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
++ AG VH +QAG + ++ L+D K G D A ++ EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 173 ------PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
P ++ ++ +V G + ++A+++ + + + T T+++ A
Sbjct: 483 WKIGLQP----NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 227 SGALDQGKLV 236
SG +D+ + +
Sbjct: 539 SGEMDKAQEI 548
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 22/250 (8%)
Query: 1 MRQKGVEPDQHTFP----LLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFAN 56
M++KG++P+ + + LL ++ E+ F +++ + G D LI F
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF---SEMIRQGILPDTVVYTTLIDGFCK 363
Query: 57 SGFIGSACQVFDESSVKDI----IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALT 112
G I +A + F E +DI + +TA+I+G+ + EA K F +M G D++T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 113 VVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEM 172
++ AG VH +QAG + ++ L+D K G D A ++ EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAG-CSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 173 ------PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAH 226
P ++ ++ +V G + ++A+++ + + + T T+++ A
Sbjct: 483 WKIGLQP----NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 227 SGALDQGKLV 236
SG +D+ + +
Sbjct: 539 SGEMDKAQEI 548
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 8/240 (3%)
Query: 1 MRQKGVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M KG+ P+ T+ L++ + + D + + + + + + +ALI AF G
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 60 IGSACQVFDE----SSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A +++DE S DI +++LING+ +D EA F M S + +T +
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+++ A G + Q G V + ++ L+ F+ G CD A K+F +M
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D++ +S+L+ G + K + A+ VF + + P+ +T ++ +G ++ G
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 113/244 (46%), Gaps = 8/244 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMF-SKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
M+ + D +++ +L+ F + + + ++ KLG++ D ++L++ + +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 60 IGSACQVFDESSV----KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
I A + D+ V + + + LI+G ++ SEA+ +M + G D T +
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ GD + + ++ G+++ D +++ ++D + +DA +F EM
Sbjct: 226 VVNGLCKRGDIDLALSLLK-KMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+VV ++ L+ ++ DA R+ +M+ + PN T ++++ A G L +
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 234 KLVH 237
+ ++
Sbjct: 345 EKLY 348
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 112/270 (41%), Gaps = 43/270 (15%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP--VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSG 58
M ++ + P+ TF L+ F K +VE +Y ++ K D D F ++LI+ F
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAE-KLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 59 FIGSACQVFDESSVKD----IIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
+ A +F+ KD ++ + LI G+ K E ++ F +M G + +T
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 115 SVLRAAAMAGDDN------------------------------FGKWVHGF----YVQAG 140
++++ AGD + +GK Y+Q
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 141 RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVVCWSVLVAGYVQCNKFQDA 198
+++ D Y ++ +++ K G +D +F + +V+ ++ +++G+ + ++A
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 199 IRVFWNMLSDNVVPNEFTLTSVLSACAHSG 228
+F M D +PN T +++ A G
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 114/261 (43%), Gaps = 16/261 (6%)
Query: 7 EPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQ 65
+P+ TF L+ +F + + ++ G D F +++ G I A
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 66 VFDESSV----KDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAA 121
+ + D++ +T +I+ ++AL F +M + G + +T S++R
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 122 MAGDDNFGKWVHGFYVQAG----RVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYSY- 176
N+G+W + + ++ + +SAL+D + K G +A K++DEM
Sbjct: 302 -----NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 177 -RDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKL 235
D+ +S L+ G+ ++ +A +F M+S + PN T +++ + +++G
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 236 VHQYIECKKVSLNSVELGTAL 256
+ + + + + N+V T +
Sbjct: 417 LFREMSQRGLVGNTVTYNTLI 437
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 100/231 (43%), Gaps = 13/231 (5%)
Query: 25 VEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVK----DIIAWTA 80
V D ++ ++ G + N+LI N G A ++ + + +++ ++A
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 81 LINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAG 140
LI+ +VK EA K + +M D T S++ M D + H F +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM--HDRLDEAKHMFELMIS 388
Query: 141 RVQLDGYV-WSALMDMYFKCGHCDDACKVFDEMPYSYR----DVVCWSVLVAGYVQCNKF 195
+ V ++ L+ + K ++ ++F EM S R + V ++ L+ G Q
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 196 QDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVS 246
A ++F M+SD V P+ T + +L G L++ +V +Y++ K+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD-----IIAWTALINGYVKNDLPSE 93
GF D ++ + G+ ++ DE V+D + + LI+ Y + + +E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY--VQAGRVQLDGYVWSA 151
A+ F +M+ G D +T +++ A AG F Y +QAG + D + +S
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG---FLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 152 LMDMYFKCGHCDDACKVFDEM--PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+++ K GH A K+F EM ++V +++++ + + +Q+A++++ +M +
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
P++ T + V+ H G L++ + V ++ K
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 114/241 (47%), Gaps = 9/241 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G +PD+ T+ L+ + +K D M +Y ++ G D F + +I+ +G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 60 IGSA----CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ +A C++ D+ +++ + +++ + K ALK + M++ G D +T
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ G + V Q + D V+ L+D++ K G+ + A + + M ++
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA-LDQ 232
+V + L++ +++ NK +A + NML+ + P+ T T +LS C + LD
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Query: 233 G 233
G
Sbjct: 664 G 664
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD-----IIAWTALINGYVKNDLPSE 93
GF D ++ + G+ ++ DE V+D + + LI+ Y + + +E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY--VQAGRVQLDGYVWSA 151
A+ F +M+ G D +T +++ A AG F Y +QAG + D + +S
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG---FLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 152 LMDMYFKCGHCDDACKVFDEM--PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+++ K GH A K+F EM ++V +++++ + + +Q+A++++ +M +
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
P++ T + V+ H G L++ + V ++ K
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 114/241 (47%), Gaps = 9/241 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G +PD+ T+ L+ + +K D M +Y ++ G D F + +I+ +G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 60 IGSA----CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ +A C++ D+ +++ + +++ + K ALK + M++ G D +T
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ G + V Q + D V+ L+D++ K G+ + A + + M ++
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA-LDQ 232
+V + L++ +++ NK +A + NML+ + P+ T T +LS C + LD
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Query: 233 G 233
G
Sbjct: 664 G 664
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 39 GFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD-----IIAWTALINGYVKNDLPSE 93
GF D ++ + G+ ++ DE V+D + + LI+ Y + + +E
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 94 ALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFY--VQAGRVQLDGYVWSA 151
A+ F +M+ G D +T +++ A AG F Y +QAG + D + +S
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG---FLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 152 LMDMYFKCGHCDDACKVFDEM--PYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDN 209
+++ K GH A K+F EM ++V +++++ + + +Q+A++++ +M +
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 210 VVPNEFTLTSVLSACAHSGALDQGKLVHQYIECK 243
P++ T + V+ H G L++ + V ++ K
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 114/241 (47%), Gaps = 9/241 (3%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKPVVEDPFM-IYAQIFKLGFDLDRFAGNALISAFANSGF 59
M++ G +PD+ T+ L+ + +K D M +Y ++ G D F + +I+ +G
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 60 IGSA----CQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ +A C++ D+ +++ + +++ + K ALK + M++ G D +T
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
V+ G + V Q + D V+ L+D++ K G+ + A + + M ++
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603
Query: 176 --YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGA-LDQ 232
+V + L++ +++ NK +A + NML+ + P+ T T +LS C + LD
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Query: 233 G 233
G
Sbjct: 664 G 664
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 11/249 (4%)
Query: 1 MRQKGVEPDQHTFPLLL-KMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
++ +G++PD + + + S +E ++ ++ + G + L+ A+ SG
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 60 IGSACQVFDESSVKDI----IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ DE DI + + LI+G KN L S+A+ F ++ S G+ A +
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI-SNDFGLQANAAIF 616
Query: 116 VLRAAAMAGDDNFGKWVHGF--YVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMP 173
+ D+ F VQ G V D +++LMD FK G+ +A + D+M
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVP-DRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 174 Y--SYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALD 231
D++ ++ LV G CN+ Q A M+ + + P+E SVL G +D
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCID 735
Query: 232 QGKLVHQYI 240
+ + Y+
Sbjct: 736 EAVELQSYL 744
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 105/238 (44%), Gaps = 12/238 (5%)
Query: 5 GVEPDQHTFPLLLK-MFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIGSA 63
G P T+ +++ M + VE ++ ++ G D N++I F G +
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 64 CQVFDESS----VKDIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVLRA 119
F+E D+I + ALIN + K L+ + +M+ G + ++ +++ A
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 120 AAMAGDDNFGKWVHGFYVQAGRVQL--DGYVWSALMDMYFKCGHCDDACKVFDEMPY--S 175
G + FYV RV L + Y +++L+D K G+ DA ++ +EM
Sbjct: 377 FCKEG---MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
+VV ++ L+ G + ++A +F M + V+PN + +++ + +D+
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 14/226 (6%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR+ G+ P+++T+ L+ K + D F + ++ ++G + + ALI ++
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 60 IGSACQVFDESSVKDII----AWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
+ A ++F + +I ++ ALI+G+VK AL+ +++ G D L +
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+ K V + G ++ + +++ LMD YFK G+ + + DEM
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECG-IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 176 YRD--VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTS 219
+ VV + VL+ G + A+ F N + N+F L +
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYF------NRISNDFGLQA 611
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 31 IYAQIFKLGF--DLDRFAGNALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKN 88
++A KLGF + D + +LI + + A V + S + +AW A + +
Sbjct: 215 VHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYRE 274
Query: 89 DLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDD-NFGKWVHGFYVQAGRVQLDGY 147
E ++ F++M + G + +VL+A + D G+ VH ++ G + D
Sbjct: 275 GEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLG-FESDCL 333
Query: 148 VWSALMDMYFKCGHCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLS 207
+ L++MY K G DA KVF + V CW+ +VA Y+Q + +AI++ + M +
Sbjct: 334 IRCRLIEMYGKYGKVKDAEKVF-KSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKA 392
Query: 208 DNVVPNEFTLTS 219
+ ++ L
Sbjct: 393 TGIKAHDTLLNE 404
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 48 NALISAFANSGFIGSACQVFDESSVKDIIAWTALINGYVKNDLPSEALKCFVKM-RSTGT 106
N L+ + G + Q+FD +D +W + G ++ +A FV M + +
Sbjct: 127 NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQK 186
Query: 107 G---VDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRV-QLDGYVWSALMDMY--FKCG 160
G + + + VL+A AM D GK VH + G + + D Y+ +L+ Y F+C
Sbjct: 187 GAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRC- 245
Query: 161 HCDDACKVFDEMPYSYRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSV 220
+DA V ++ S + V W+ V + +FQ+ IR F M + + N ++V
Sbjct: 246 -LEDANLVLHQL--SNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNV 302
Query: 221 LSACAHSGALDQGKLVHQYIECKKVSLNSVELG 253
L AC S D G+ Q V N+++LG
Sbjct: 303 LKAC--SWVSDGGRSGQQ------VHANAIKLG 327
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 8/227 (3%)
Query: 1 MRQKGVEPDQHTF-PLLLKMFSKPVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
MR +G+ P+ HT+ L+ + ++D ++ + LG + I + SG
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 60 IGSACQVFDESSVK----DIIAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVS 115
SA + F++ K +I+A A + K EA + F ++ G D++T
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 116 VLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS 175
+++ + G+ + + ++ G + D V ++L++ +K D+A K+F M
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENG-CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 176 YRD--VVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSV 220
VV ++ L+AG + K Q+AI +F M+ PN T ++
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 112/250 (44%), Gaps = 10/250 (4%)
Query: 1 MRQKGVEPDQHTFPLLLKMFSKP-VVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGF 59
++ G PD T+ LL + K +++ F +Y ++ + + N +IS +G
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 60 IGSACQVF-DESSVKDI----IAWTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVV 114
+ A ++ D S +D + LI+G K+ EA + F M G +
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 115 SVLRAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPY 174
++ AG+ + + V+ G V+ D +S L+D G D+ F E+
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEG-VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 175 S--YRDVVCWSVLVAGYVQCNKFQDAIRVFWNM-LSDNVVPNEFTLTSVLSACAHSGALD 231
S DVVC+++++ G + ++ ++A+ +F M S + P+ +T S++ +G ++
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 232 QGKLVHQYIE 241
+ ++ I+
Sbjct: 1050 EAGKIYNEIQ 1059
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 101/227 (44%), Gaps = 11/227 (4%)
Query: 32 YAQIFKLGFDLDRFAGNALISAFANSGFIGSACQVFDESSVKD----IIAWTALINGYVK 87
Y +I GF L+ + N L++ F G I A +VFDE + + ++++ LINGY K
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 88 NDLPSEALKCFVKMRSTGTGVDALTVVSVLRAAAMAGDDNFGKWVHGFYVQAGRVQL--D 145
E + +M + T D T +++ A +N HG + + + L +
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC---KENKMDGAHGLFDEMCKRGLIPN 344
Query: 146 GYVWSALMDMYFKCGHCDDACKVFDEMPYS--YRDVVCWSVLVAGYVQCNKFQDAIRVFW 203
+++ L+ + + G D + + +M D+V ++ LV G+ + A +
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 204 NMLSDNVVPNEFTLTSVLSACAHSGALDQGKLVHQYIECKKVSLNSV 250
M+ + P++ T T+++ G ++ + + ++ + L+ V
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 8/238 (3%)
Query: 3 QKGVEPDQHTFPLLLKMFSK-PVVEDPFMIYAQIFKLGFDLDRFAGNALISAFANSGFIG 61
++ ++P +F L+ + K +++ F + Q+ K D F +ALI+A +
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
Query: 62 SACQVFDESSVKDIIA----WTALINGYVKNDLPSEALKCFVKMRSTGTGVDALTVVSVL 117
A +FDE + +I +T LI+G+ +N + + KM S G D + +++
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387
Query: 118 RAAAMAGDDNFGKWVHGFYVQAGRVQLDGYVWSALMDMYFKCGHCDDACKVFDEMPYS-- 175
GD + + ++ G ++ D ++ L+D + + G + A ++ EM +
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRG-LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 176 YRDVVCWSVLVAGYVQCNKFQDAIRVFWNMLSDNVVPNEFTLTSVLSACAHSGALDQG 233
D V +S LV G + + DA R ML + P++ T T ++ A G G
Sbjct: 447 ELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTG 504