Miyakogusa Predicted Gene

Lj3g3v3487860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3487860.1 Non Chatacterized Hit- tr|I3SAI1|I3SAI1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,87.72,0.000000000002,seg,NULL,CUFF.45881.1
         (145 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G11760.1 | Symbols: MED32 | MED32; Has 41 Blast hits to 40 pr...   191   2e-49

>AT1G11760.1 | Symbols: MED32 | MED32; Has 41 Blast hits to 40
           proteins in 14 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:3972356-3972811 REVERSE LENGTH=151
          Length = 151

 Score =  191 bits (484), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/153 (65%), Positives = 114/153 (74%), Gaps = 10/153 (6%)

Query: 1   MDSVVDSLNNAYQDFVAAAATVLEAKENASALKTTATDTALENFKQKWELFRVACDQAEE 60
           MD++VDSLN AY+ FV A+A VLE+KE+A   K   TDTALENFK+KWELFRVACDQAEE
Sbjct: 1   MDNIVDSLNKAYEKFVLASAGVLESKESAGGQKALLTDTALENFKEKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGYV----GGKPGQATTG----LPPISAVRLEQMSKAVRWLV 112
           FVESVKQRIGSECLVDEATG      GG+   A TG    LPPISAVRLEQMS+AVRWLV
Sbjct: 61  FVESVKQRIGSECLVDEATGLTTTAAGGQAPAAVTGAATSLPPISAVRLEQMSRAVRWLV 120

Query: 113 IELQHXXXXXXANSALSHPSAPFDARFSEDAAQ 145
           +ELQ       A  ++   S  FD+RFSED+ Q
Sbjct: 121 LELQR--GSGVAPGSVHSSSTGFDSRFSEDSTQ 151