Miyakogusa Predicted Gene

Lj3g3v3464480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3464480.1 Non Chatacterized Hit- tr|I1KUW4|I1KUW4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,95.39,0,PP2APR55,Protein phosphatase 2A, regulatory subunit PR55;
PROTEIN PHOSPHATASE PP2A 55 KDA REGULATORY,CUFF.45839.1
         (152 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17720.2 | Symbols: ATB BETA | Protein phosphatase 2A, regula...   279   5e-76
AT1G17720.1 | Symbols: ATB BETA | Protein phosphatase 2A, regula...   279   5e-76
AT1G51690.3 | Symbols: B ALPHA | protein phosphatase 2A 55 kDa r...   272   6e-74
AT1G51690.2 | Symbols: ATB ALPHA, B ALPHA | protein phosphatase ...   272   6e-74
AT1G51690.1 | Symbols: ATB ALPHA, B ALPHA | protein phosphatase ...   272   6e-74

>AT1G17720.2 | Symbols: ATB BETA | Protein phosphatase 2A,
           regulatory subunit PR55 | chr1:6093949-6098065 REVERSE
           LENGTH=500
          Length = 500

 Score =  279 bits (714), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 128/152 (84%), Positives = 144/152 (94%), Gaps = 1/152 (0%)

Query: 1   MTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVSTGSYSNL 60
           MTLKLWDINMDSGPVA++QVHE+LRP+LCDLYENDSIFDKFECCLSGDG RV+TGSYSNL
Sbjct: 350 MTLKLWDINMDSGPVASYQVHEHLRPRLCDLYENDSIFDKFECCLSGDGLRVATGSYSNL 409

Query: 61  FRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPARSLGNSITRVVRRGAESSGVDANGNS 120
           FRVFG + GSTEA TLEASKNPMRRQ+ TP+RP+RS+G S+TRVVRRG+ES G +ANGN+
Sbjct: 410 FRVFGASQGSTEAATLEASKNPMRRQIQTPARPSRSIG-SMTRVVRRGSESPGTEANGNA 468

Query: 121 FDFTTKLLHLAWHPTENSIACAAANSLYMYYA 152
           +DFTTKLLH+AWHPTENSIACAAANSLYMYYA
Sbjct: 469 YDFTTKLLHMAWHPTENSIACAAANSLYMYYA 500


>AT1G17720.1 | Symbols: ATB BETA | Protein phosphatase 2A,
           regulatory subunit PR55 | chr1:6093949-6098065 REVERSE
           LENGTH=501
          Length = 501

 Score =  279 bits (714), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 128/152 (84%), Positives = 144/152 (94%), Gaps = 1/152 (0%)

Query: 1   MTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVSTGSYSNL 60
           MTLKLWDINMDSGPVA++QVHE+LRP+LCDLYENDSIFDKFECCLSGDG RV+TGSYSNL
Sbjct: 351 MTLKLWDINMDSGPVASYQVHEHLRPRLCDLYENDSIFDKFECCLSGDGLRVATGSYSNL 410

Query: 61  FRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPARSLGNSITRVVRRGAESSGVDANGNS 120
           FRVFG + GSTEA TLEASKNPMRRQ+ TP+RP+RS+G S+TRVVRRG+ES G +ANGN+
Sbjct: 411 FRVFGASQGSTEAATLEASKNPMRRQIQTPARPSRSIG-SMTRVVRRGSESPGTEANGNA 469

Query: 121 FDFTTKLLHLAWHPTENSIACAAANSLYMYYA 152
           +DFTTKLLH+AWHPTENSIACAAANSLYMYYA
Sbjct: 470 YDFTTKLLHMAWHPTENSIACAAANSLYMYYA 501


>AT1G51690.3 | Symbols: B ALPHA | protein phosphatase 2A 55 kDa
           regulatory subunit B alpha isoform |
           chr1:19164124-19169974 FORWARD LENGTH=603
          Length = 603

 Score =  272 bits (696), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 126/152 (82%), Positives = 138/152 (90%), Gaps = 1/152 (0%)

Query: 1   MTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVSTGSYSNL 60
           MTLKLWDINMD+GPVATFQVHEYL+PKLCDLYENDSIFDKFECC+SG+G R +TGSYSNL
Sbjct: 453 MTLKLWDINMDAGPVATFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATGSYSNL 512

Query: 61  FRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPARSLGNSITRVVRRGAESSGVDANGNS 120
           FRVFG APGSTE  TLEAS+NPMRR VP PSRP+R+L +SITRVV RG+ES GVD N N+
Sbjct: 513 FRVFGVAPGSTETATLEASRNPMRRHVPIPSRPSRAL-SSITRVVSRGSESPGVDGNTNA 571

Query: 121 FDFTTKLLHLAWHPTENSIACAAANSLYMYYA 152
            D+TTKLLHLAWHP ENSIACAAANSLYMYYA
Sbjct: 572 LDYTTKLLHLAWHPNENSIACAAANSLYMYYA 603


>AT1G51690.2 | Symbols: ATB ALPHA, B ALPHA | protein phosphatase 2A
           55 kDa regulatory subunit B alpha isoform |
           chr1:19166218-19169974 FORWARD LENGTH=512
          Length = 512

 Score =  272 bits (695), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 126/152 (82%), Positives = 138/152 (90%), Gaps = 1/152 (0%)

Query: 1   MTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVSTGSYSNL 60
           MTLKLWDINMD+GPVATFQVHEYL+PKLCDLYENDSIFDKFECC+SG+G R +TGSYSNL
Sbjct: 362 MTLKLWDINMDAGPVATFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATGSYSNL 421

Query: 61  FRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPARSLGNSITRVVRRGAESSGVDANGNS 120
           FRVFG APGSTE  TLEAS+NPMRR VP PSRP+R+L +SITRVV RG+ES GVD N N+
Sbjct: 422 FRVFGVAPGSTETATLEASRNPMRRHVPIPSRPSRAL-SSITRVVSRGSESPGVDGNTNA 480

Query: 121 FDFTTKLLHLAWHPTENSIACAAANSLYMYYA 152
            D+TTKLLHLAWHP ENSIACAAANSLYMYYA
Sbjct: 481 LDYTTKLLHLAWHPNENSIACAAANSLYMYYA 512


>AT1G51690.1 | Symbols: ATB ALPHA, B ALPHA | protein phosphatase 2A
           55 kDa regulatory subunit B alpha isoform |
           chr1:19166218-19169974 FORWARD LENGTH=513
          Length = 513

 Score =  272 bits (695), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 126/152 (82%), Positives = 138/152 (90%), Gaps = 1/152 (0%)

Query: 1   MTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVSTGSYSNL 60
           MTLKLWDINMD+GPVATFQVHEYL+PKLCDLYENDSIFDKFECC+SG+G R +TGSYSNL
Sbjct: 363 MTLKLWDINMDAGPVATFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATGSYSNL 422

Query: 61  FRVFGCAPGSTEATTLEASKNPMRRQVPTPSRPARSLGNSITRVVRRGAESSGVDANGNS 120
           FRVFG APGSTE  TLEAS+NPMRR VP PSRP+R+L +SITRVV RG+ES GVD N N+
Sbjct: 423 FRVFGVAPGSTETATLEASRNPMRRHVPIPSRPSRAL-SSITRVVSRGSESPGVDGNTNA 481

Query: 121 FDFTTKLLHLAWHPTENSIACAAANSLYMYYA 152
            D+TTKLLHLAWHP ENSIACAAANSLYMYYA
Sbjct: 482 LDYTTKLLHLAWHPNENSIACAAANSLYMYYA 513