Miyakogusa Predicted Gene
- Lj3g3v3453430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3453430.1 tr|Q9SXT7|Q9SXT7_CICAR Rac-type small GTP-binding
protein OS=Cicer arietinum PE=2 SV=1,94.92,0,RASTRNSFRMNG,Small GTPase
superfamily; small_GTP: small GTP-binding protein domain,Small
GTP-binding,CUFF.45827.1
(197 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP... 350 3e-97
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 348 1e-96
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 347 3e-96
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 347 3e-96
AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 346 7e-96
AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 346 7e-96
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-l... 346 7e-96
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |... 344 3e-95
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related... 343 4e-95
AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-l... 333 4e-92
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-lik... 318 1e-87
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-relat... 315 1e-86
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | RHO-r... 300 4e-82
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-lik... 294 3e-80
AT3G51290.2 | Symbols: | Protein of unknown function (DUF630) ;... 289 8e-79
AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 99 2e-21
AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 99 2e-21
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | R... 99 2e-21
AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 96 1e-20
AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 96 1e-20
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTP... 96 1e-20
AT5G59840.1 | Symbols: | Ras-related small GTP-binding family p... 96 1e-20
AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-bindi... 96 1e-20
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-relat... 96 1e-20
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 95 3e-20
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, R... 94 7e-20
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 93 1e-19
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase ho... 92 3e-19
AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homo... 90 8e-19
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D... 90 9e-19
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 90 1e-18
AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C... 89 1e-18
AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A... 89 2e-18
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | Ras-rel... 89 2e-18
AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E... 89 2e-18
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 89 3e-18
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small... 88 3e-18
AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 88 3e-18
AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 88 3e-18
AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 88 3e-18
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase hom... 88 4e-18
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-rela... 88 4e-18
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase hom... 87 5e-18
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase ho... 87 7e-18
AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B... 87 1e-17
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 87 1e-17
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, R... 86 1e-17
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RAB... 86 2e-17
AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E... 85 3e-17
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 85 4e-17
AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G... 84 6e-17
AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homol... 84 7e-17
AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C... 84 8e-17
AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F... 83 1e-16
AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A... 83 1e-16
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB G... 82 2e-16
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase ... 82 2e-16
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 82 2e-16
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB... 82 3e-16
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RA... 82 3e-16
AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D... 82 3e-16
AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A... 81 5e-16
AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A... 81 5e-16
AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I... 80 6e-16
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 80 6e-16
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase hom... 80 7e-16
AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H | chr2:... 80 1e-15
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, R... 79 1e-15
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPas... 79 2e-15
AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B... 77 5e-15
AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |... 75 3e-14
AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A | chr5:25... 74 6e-14
AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 | chr5:972... 72 2e-13
AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |... 72 2e-13
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 72 3e-13
AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 71 5e-13
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homo... 71 5e-13
AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 | c... 70 8e-13
AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D... 70 9e-13
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase ho... 70 9e-13
AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 70 1e-12
AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 70 1e-12
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase h... 70 1e-12
AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protei... 69 1e-12
AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 69 3e-12
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 68 3e-12
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 68 3e-12
AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A | chr4:61... 66 2e-11
AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear pr... 66 2e-11
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:223922... 65 2e-11
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear... 65 3e-11
AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 64 9e-11
AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 | ... 62 2e-10
AT5G54840.1 | Symbols: ATSGP1, SGP1 | Ras-related small GTP-bind... 50 9e-07
AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 49 2e-06
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP
binding protein 5 | chr1:28475964-28477377 FORWARD
LENGTH=196
Length = 196
Score = 350 bits (899), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 166/178 (93%), Positives = 174/178 (97%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKL 120
TAGQEDYNRLRPLSYRGADVF+L FSLIS+ASYENVAKKWIPELRHYAPGVPIIL+GTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
DLRDDKQFF DHP AVPITT QGEEL+KLIG+P+YIECSSKTQ+NVKAVFDAAIKVVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 |
RHO-related protein from plants 1 |
chr3:19043197-19044215 FORWARD LENGTH=197
Length = 197
Score = 348 bits (893), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/197 (84%), Positives = 178/197 (90%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1 MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKL 120
TAGQEDYNRLRPLSYRGADVF+L FSLIS+ASYENV+KKWIPEL+HYAPGVPI+L+GTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVLXX 180
DLRDDKQFF DHP AVPITTAQGEELRK IGAP YIECSSKTQ+NVKAVFDAAI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXACSIL 197
ACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 347 bits (890), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 166/197 (84%), Positives = 178/197 (90%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKL 120
TAGQEDYNRLRPLSYRGADVF+L FSLIS+ASYENV+KKWIPEL+HYAPGVPI+L+GTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVLXX 180
DLRDDKQFF DHP AVPITTAQGEEL+KLIGAP YIECSSKTQ+NVK VFDAAI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXACSIL 197
ACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 347 bits (890), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 166/197 (84%), Positives = 178/197 (90%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKL 120
TAGQEDYNRLRPLSYRGADVF+L FSLIS+ASYENV+KKWIPEL+HYAPGVPI+L+GTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVLXX 180
DLRDDKQFF DHP AVPITTAQGEEL+KLIGAP YIECSSKTQ+NVK VFDAAI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXACSIL 197
ACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 346 bits (887), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 160/178 (89%), Positives = 174/178 (97%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKL 120
TAGQEDYNRLRPLSYRGADVFLL FSL+S+ASYENV+KKW+PELRHYAPGVPIIL+GTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
DLRDDKQFF +HP AVPI+TAQGEEL+KLIGAP YIECS+KTQ+NVKAVFDAAIKVVL
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVL 178
>AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 346 bits (887), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 160/178 (89%), Positives = 174/178 (97%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKL 120
TAGQEDYNRLRPLSYRGADVFLL FSL+S+ASYENV+KKW+PELRHYAPGVPIIL+GTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
DLRDDKQFF +HP AVPI+TAQGEEL+KLIGAP YIECS+KTQ+NVKAVFDAAIKVVL
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVL 178
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-like
3 | chr4:16673176-16674540 FORWARD LENGTH=198
Length = 198
Score = 346 bits (887), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 160/178 (89%), Positives = 174/178 (97%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKL 120
TAGQEDYNRLRPLSYRGADVFLL FSL+S+ASYENV+KKW+PELRHYAPGVPIIL+GTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
DLRDDKQFF +HP AVPI+TAQGEEL+KLIGAP YIECS+KTQ+NVKAVFDAAIKVVL
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVL 178
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |
RAC-like 6 | chr4:17024051-17025514 REVERSE LENGTH=197
Length = 197
Score = 344 bits (882), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 164/197 (83%), Positives = 177/197 (89%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKL 120
TAGQEDYNRLRPLSYRGADVF+L FSLIS+ASYENV+KKWIPEL+HYAPGVPI+L+GTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVLXX 180
DLRDDKQFF DHP AVPITT QGEEL+KLIGAP YIECSSK+Q+NVK VFDAAI+VVL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXACSIL 197
ACSIL
Sbjct: 181 PKQKKKKNKAQKACSIL 197
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related
protein from plants 2 | chr1:6967223-6968603 FORWARD
LENGTH=195
Length = 195
Score = 343 bits (880), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 163/176 (92%), Positives = 171/176 (97%)
Query: 3 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTA 62
ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWDTA
Sbjct: 2 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTA 61
Query: 63 GQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLDL 122
GQEDYNRLRPLSYRGADVF+L FSLIS+ASYEN+AKKWIPELRHYAPGVPIIL+GTKLDL
Sbjct: 62 GQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDL 121
Query: 123 RDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
RDDKQFF DHP AVPITT QGEEL+KLIG+ VYIECSSKTQ+NVKAVFDAAIKVVL
Sbjct: 122 RDDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAIKVVL 177
>AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-like
2 | chr5:18643761-18645758 FORWARD LENGTH=201
Length = 201
Score = 333 bits (854), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 154/178 (86%), Positives = 167/178 (93%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKL 120
TAGQEDYNRLRPLSYRGADVFLL FSLIS+ASYEN+ KKW+PEL+HYAPG+PI+L+GTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
DLRDDKQF +DHP A ITTAQGEELRK+IGA Y+ECSSKTQ+NVKAVFD AI+V L
Sbjct: 121 DLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178
>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-like
10 | chr5:25237236-25238939 FORWARD LENGTH=215
Length = 215
Score = 318 bits (816), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 147/177 (83%), Positives = 164/177 (92%)
Query: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
SAS+FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANVVV+G+TVNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLD 121
AGQEDYNRLRPLSYRGADVF+L FSL+SRASYENV KKWIPEL+H+APGVP++L+GTKLD
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGTKLD 123
Query: 122 LRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
LR+DK + DHP P+TTAQGEELRKLIGA YIECSSKTQ+NVKAVFD+AIK V+
Sbjct: 124 LREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAIKEVI 180
>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-related
protein from plants 10 | chr3:17731561-17733241 FORWARD
LENGTH=208
Length = 208
Score = 315 bits (807), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 146/177 (82%), Positives = 162/177 (91%)
Query: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
SAS+FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFS NVVV+G TVNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLD 121
AGQEDYNRLRPLSYRGADVF+L FSLISRASYENV KKWIPEL+H+APGVPI+L+GTK+D
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKMD 123
Query: 122 LRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
LR+D+ + DHP P+TT+QGEELRK IGA YIECSSKTQ+NVKAVFDAAIKVV+
Sbjct: 124 LREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAIKVVI 180
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 |
RHO-related protein from plants 9 |
chr4:14278289-14279705 FORWARD LENGTH=209
Length = 209
Score = 300 bits (768), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 143/178 (80%), Positives = 156/178 (87%), Gaps = 2/178 (1%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSAS+FIKCVTVGDGAVGKTCMLI YTSN FPTDY+PTVFDNFSANV VDG VNLGLWD
Sbjct: 1 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKL 120
TAGQEDY+RLRPLSYRGAD+F+L FSLIS+ASYENV KKW+PELR +AP VPI+L+GTKL
Sbjct: 61 TAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
DLRDDK + DH IT+ QGEELRK IGA YIECSSKTQ+NVKAVFD AIKVVL
Sbjct: 121 DLRDDKGYLADHTNV--ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 176
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-like 9
| chr2:18429276-18430636 FORWARD LENGTH=209
Length = 209
Score = 294 bits (753), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 141/192 (73%), Positives = 157/192 (81%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQE 65
FIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNF+ANV+VDG TVNLGLWDTAGQE
Sbjct: 18 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQE 77
Query: 66 DYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLDLRDD 125
DYNR+RPLSYRGADVF+L FSLISR S+EN+AKKW+PELRHYAP VPI+L+GTK DLRD+
Sbjct: 78 DYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTKSDLRDN 137
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVLXXXXXXX 185
QF +++P A I QG+ELRK IGA YIECSSK Q NVKAVFD AIKVVL
Sbjct: 138 MQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAIKVVLHPPSKTK 197
Query: 186 XXXXXXXACSIL 197
C +L
Sbjct: 198 KRKRKIGLCHVL 209
>AT3G51290.2 | Symbols: | Protein of unknown function (DUF630)
;Protein of unknown function (DUF632) |
chr3:19039980-19044215 FORWARD LENGTH=798
Length = 798
Score = 289 bits (740), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 136/164 (82%), Positives = 145/164 (88%)
Query: 34 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLCFSLISRASY 93
DYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADVF+L FSLIS+ASY
Sbjct: 635 DYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 694
Query: 94 ENVAKKWIPELRHYAPGVPIILIGTKLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAP 153
ENV+KKWIPEL+HYAPGVPI+L+GTKLDLRDDKQFF DHP AVPITTAQGEELRK IGAP
Sbjct: 695 ENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAP 754
Query: 154 VYIECSSKTQKNVKAVFDAAIKVVLXXXXXXXXXXXXXXACSIL 197
YIECSSKTQ+NVKAVFDAAI+VVL ACSIL
Sbjct: 755 TYIECSSKTQENVKAVFDAAIRVVLQPPKQKKKKSKAQKACSIL 798
>AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E + + YRGA LL + + +S+ N+ + WI + +H + V IL+G K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ K+ AVP TA+G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E + + YRGA LL + + +S+ N+ + WI + +H + V IL+G K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ K+ AVP TA+G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | RAB
GTPase homolog 8A | chr3:16917908-16919740 FORWARD
LENGTH=216
Length = 216
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E + + YRGA LL + + +S+ N+ + WI + +H + V IL+G K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ K+ AVP TA+G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E + + YRGA LL + + +S+ N+ + WI + +H + V IL+G K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ K+ AVP ++G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMK-FFETSAKTNLNVEEVF 170
>AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E + + YRGA LL + + +S+ N+ + WI + +H + V IL+G K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ K+ AVP ++G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMK-FFETSAKTNLNVEEVF 170
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTPase
homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E + + YRGA LL + + +S+ N+ + WI + +H + V IL+G K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ K+ AVP ++G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMK-FFETSAKTNLNVEEVF 170
>AT5G59840.1 | Symbols: | Ras-related small GTP-binding family
protein | chr5:24107450-24109049 REVERSE LENGTH=216
Length = 216
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E + + YRGA LL + + +S+ N+ + WI + +H + V IL+G K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ K+ AVP ++G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGIK-FFETSAKTNLNVEEVF 170
>AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-binding
family protein | chr3:20318597-20320737 FORWARD
LENGTH=193
Length = 193
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAGQ 64
+K V +GD VGK+C+++ + F TV +F + + D +TV +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E Y+ L PL YRGA V ++ + + S S++ A+ W+ EL +H +P + + L+G K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFD 171
+ ++ + T G EL + G +IE S+KT N+ +F+
Sbjct: 153 EKRE----------VPTEDGMELAEKNGM-FFIETSAKTADNINQLFE 189
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-related
small GTP-binding family protein |
chr3:20318597-20320782 FORWARD LENGTH=202
Length = 202
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAGQ 64
+K V +GD VGK+C+++ + F TV +F + + D +TV +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E Y+ L PL YRGA V ++ + + S S++ A+ W+ EL +H +P + + L+G K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFD 171
+ ++ + T G EL + G +IE S+KT N+ +F+
Sbjct: 153 EKRE----------VPTEDGMELAEKNGM-FFIETSAKTADNINQLFE 189
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988839 REVERSE LENGTH=211
Length = 211
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 98/180 (54%), Gaps = 15/180 (8%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS K + +GD VGK+C+L+ +T F + T+ F A +V VDG + L +W
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGT 118
DTAGQE + + YRGA LL + + R ++ ++A W+ + R +A P + I+LIG
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANPNMSIMLIGN 119
Query: 119 KLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF-DAAIKVV 177
K DL H AV + +G++ K G +++E S++T +NV+ F + A K++
Sbjct: 120 KCDLA--------HKRAV--SKEEGQQFAKEHGL-LFLEASARTAQNVEEAFIETAAKIL 168
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5
| RAS 5 | chr1:400350-401788 REVERSE LENGTH=203
Length = 203
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ ++ +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAP-GVPIILIGTKLDLR 123
E + + YRGA ++ + + S+ NV K+W+ E+ YA V +L+G K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKSDLT 126
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDA 172
+++ A+P TA+ IG P ++E S+K NV+ F A
Sbjct: 127 ENR--------AIPYETAKA--FADEIGIP-FMETSAKDATNVEQAFMA 164
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C |
chr4:9644908-9646220 REVERSE LENGTH=211
Length = 211
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+L+ +T F + T+ F A ++ +D + L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGT 118
DTAGQE + + YRGA LL + + R ++ ++A W+ + R +A + I+LIG
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGN 119
Query: 119 KLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
K DL H AV +T +GE+ K G +++E S+KT +NV+ F
Sbjct: 120 KCDLA--------HRRAV--STEEGEQFAKEHGL-IFMEASAKTAQNVEEAF 160
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase
homolog B1A | chr4:9641980-9643541 REVERSE LENGTH=205
Length = 205
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+C+L+ +T F + T+ F A + +D + L +W
Sbjct: 1 MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGT 118
DTAGQE + + YRG LL + + R ++ ++A W+ E R H + + +LIG
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLA-SWLEEARQHASENMTTMLIGN 119
Query: 119 KLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
K DL D + ++T +GE+ + G +++E S+KT NV+ F
Sbjct: 120 KCDLEDKR----------TVSTEEGEQFAREHGL-IFMEASAKTAHNVEEAF 160
>AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog
A1B | chr1:5787489-5789147 REVERSE LENGTH=216
Length = 216
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VDG V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E Y + YRGA LL + + RA++ENV +W+ EL+ H P + ++L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENV-DRWLKELKNHTDPNIVVMLVGNKSDLR 131
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
H AVP + ++ + ++E S+ NV+ F
Sbjct: 132 --------HLLAVPTEDGKSYAEQESL---CFMETSALEATNVEDAF 167
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D |
chr3:3879495-3880437 REVERSE LENGTH=222
Length = 222
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD AVGKT +L + N F D T+ F + +V+D TV +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQER 76
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLRDD 125
Y + YRGA +L + + R S++++A KW+ ELR H + I+LIG K DL
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA-KWLEELRGHADKNIVIMLIGNKCDL--- 132
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
AVP AQ R+ + ++E S+ NV+ F
Sbjct: 133 -----GSLRAVPTEDAQEFAQRENL---FFMETSALEATNVETAF 169
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RAB homolog 1 |
chr5:18244495-18246060 FORWARD LENGTH=200
Length = 200
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGTKLDLRDD 125
Y+ L P+ YRGA ++ F + ++AS+E AKKW+ EL+ P + + L G K DL D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFER-AKKWVQELQAQGNPNMVMALAGNKADLLDA 130
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
++ +A+ E+ + ++E S+KT NVK +F
Sbjct: 131 RK-----------VSAEEAEIYAQENSLFFMETSAKTATNVKDIF 164
>AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C |
chr4:18506112-18507459 FORWARD LENGTH=214
Length = 214
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 17/167 (10%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y PT+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPG---VPIILIGTKLDLR 123
+ L P R + V ++ + + +R ++ N + KWI ++ H G V I+L+G K DL
Sbjct: 71 FRSLIPSYIRDSSVAIVVYDVSNRQTFLNTS-KWIEDV-HRERGQSNVIIVLVGNKTDLV 128
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ +Q ++ ++GE+ K G ++IE S+K N+KA+F
Sbjct: 129 EKRQ----------VSISEGEDKGKEYGV-MFIETSAKENFNIKALF 164
>AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A |
chr1:27687033-27687987 FORWARD LENGTH=233
Length = 233
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L ++ + F D PT+ F+ NV V + +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGTKLDLR 123
E + + YRGA LL + + R +++N+ KKW+ ELR +A P ++L+G K DLR
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRTTFDNI-KKWLFELRDFANPETVVVLVGNKSDLR 131
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
++ +D T A+ E L ++E S+ NV+ F
Sbjct: 132 QSREVEEDEGK----TLAESEGL-------YFLETSALENVNVEEAF 167
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 |
Ras-related small GTP-binding family protein |
chr1:1951089-1952686 REVERSE LENGTH=216
Length = 216
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V+G V +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E Y + YRGA LL + + A++EN A +W+ ELR H P + ++LIG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLR 131
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
H AV A+ R+ + ++E S+ NV+ F
Sbjct: 132 --------HLVAVKTEEAKAFAERESL---YFMETSALDATNVENAF 167
>AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E |
chr4:10183903-10185223 REVERSE LENGTH=217
Length = 217
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V VD + LWDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E Y + YRGA LL + + ++ENV ++W+ ELR H V I+L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDITRHITFENV-ERWLKELRDHTDANVVIMLVGNKADLR 131
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
H AVP A+ R+ + ++E S+ NV+ F
Sbjct: 132 --------HLRAVPTEEARSFSERENM---FFMETSALDATNVEQAF 167
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding
family protein | chr4:10687441-10689449 REVERSE
LENGTH=200
Length = 200
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ +++ + + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGTKLDLRDD 125
Y+ L P+ YRGA ++ F + ++AS+E AKKW+ EL+ P + + L G K DL D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSDLLDA 130
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
++ TA+ + ++E S+KT NVK +F
Sbjct: 131 RK-----------VTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small
GTP-binding family protein | chr3:3709490-3711397
REVERSE LENGTH=205
Length = 205
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD +VGK+C+L+ + + + Y+ T+ +F + DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGTKLDLR 123
E + + YRGA ++ + S+ NV K+W+ E+ YA V +LIG K D+
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDCTEMESFNNV-KQWLSEIDRYANESVCKLLIGNKNDMV 126
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ K ++T G L +G P ++E S+K NV+ F
Sbjct: 127 ESK----------VVSTETGRALADELGIP-FLETSAKDSINVEQAF 162
>AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ +L+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPII--LIGTKLDL 122
E + L YRGA ++ + + R ++ N++ W E+ Y+ I L+G K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 RDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
++ ++ +G + + G +++ECS+KT+ NV+ F+ + +L
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELVLKIL 176
>AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ +L+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPII--LIGTKLDL 122
E + L YRGA ++ + + R ++ N++ W E+ Y+ I L+G K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 RDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
++ ++ +G + + G +++ECS+KT+ NV+ F+ + +L
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELVLKIL 176
>AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ +L+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPII--LIGTKLDL 122
E + L YRGA ++ + + R ++ N++ W E+ Y+ I L+G K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 RDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
++ ++ +G + + G +++ECS+KT+ NV+ F+ + +L
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELVLKIL 176
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase
homolog 1C | chr4:9773721-9775424 REVERSE LENGTH=202
Length = 202
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 17/178 (9%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGTKLDLR 123
E + + YRGA ++ + + S+ NV K+W+ E+ YA V +L+G K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKCDLT 126
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF---DAAIKVVL 178
K ++T + +G P ++E S+K NV+ F AAIK +
Sbjct: 127 SQK----------VVSTETAKAFADELGIP-FLETSAKNATNVEEAFMAMTAAIKTRM 173
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related
small GTP-binding family protein |
chr2:18411778-18413883 REVERSE LENGTH=208
Length = 208
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLRDD 125
+ L P R + V ++ + + SR S+ N KWI E+R V ++L+G K DL D
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNTT-KWIDEVRTERGSDVIVVLVGNKTDLVDK 129
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+Q ++ A+ EL + +IE S+K N+KA+F
Sbjct: 130 RQ------VSIEEAEAKARELNVM-----FIETSAKAGFNIKALF 163
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase
homolog 1A | chr5:19167029-19168718 FORWARD LENGTH=202
Length = 202
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 17/178 (9%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+C+L+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGTKLDLR 123
E + + YRGA ++ + + S+ NV K+W+ E+ YA V +L+G K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKNDLT 126
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF---DAAIKVVL 178
K ++T + +G P ++E S+K NV+ F AAIK +
Sbjct: 127 SQK----------VVSTETAKAFADELGIP-FLETSAKNATNVEEAFMAMTAAIKTRM 173
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase
homolog E1E | chr3:3034687-3036379 FORWARD LENGTH=218
Length = 218
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +TF T ++ T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E + + YRGA LL + + +S+ N+ + W+ + +H + V IL+G K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ K+ AVP T++G+ L G + E S+KT +NV+ VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIK-FFETSAKTNQNVEQVF 170
>AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B |
chr1:6265416-6266659 REVERSE LENGTH=229
Length = 229
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L ++ + F D PT+ +F+ NV V T+ +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHY-APGVPIILIGTKLDLR 123
E + + YRGA LL + + R +++N+ +KW+ ELR + +P ++L+G K DL
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRITFKNI-EKWLSELRGFSSPETVVVLVGNKSDLG 131
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAI 174
++ ++ T A+ E L ++E S+ +NV+ F + I
Sbjct: 132 QSREVEEEEGK----TLAESEGL-------YFLETSALENQNVEEAFLSMI 171
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883679-885158 FORWARD
LENGTH=216
Length = 216
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+C+L+ ++ +TF T ++ T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-RHYAPGVPIILIGTKLDLR 123
E + + YRGA LL + + +S+ N+ + W+ + +H + V IL+G K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ K+ AVP TA+G+ L G + E S+KT NV+ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLNVENVF 170
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A,
RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE
LENGTH=217
Length = 217
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGTKLDLR 123
E Y + YRGA LL + + ++ENV+ +W+ ELR +A + I+LIG K DL+
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVS-RWLKELRDHADSNIVIMLIGNKTDLK 130
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVV 177
H AV AQ ++ + +IE S+ NV+ F + V
Sbjct: 131 --------HLRAVATEDAQSYAEKEGLS---FIETSALEALNVEKAFQTILSEV 173
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RABH1d
| RAB GTPase homolog H1D | chr2:9466568-9467688 FORWARD
LENGTH=207
Length = 207
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPG-VPIILIGTKLDLRDD 125
+ L P R + V ++ + + +R S+ N + KWI E+R+ G V I+L+G K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVVVYDVANRLSFLNTS-KWIEEVRNERAGDVIIVLVGNKTDLVEK 129
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+Q ++ +G+ + G ++IE S+K N+K +F
Sbjct: 130 RQ----------VSIEEGDSKGREYGV-MFIETSAKAGFNIKPLF 163
>AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E |
chr5:3219991-3221301 FORWARD LENGTH=207
Length = 207
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLRDD 125
+ L P R + V ++ + + +R S+ N + KWI ++R V I+L+G K DL D
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTS-KWIEDVRTERGSDVIIVLVGNKTDLVDK 129
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+Q ++ +G+ + G ++IE S+K N+K +F
Sbjct: 130 RQ----------VSIEEGDNKARDYGV-IFIETSAKAGFNIKPLF 163
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RAB GTPase homolog C2A | chr5:885741-887061
REVERSE LENGTH=210
Length = 210
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQED 66
K + +GD VGK+ +L+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLVSFISSSVE-DLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQER 73
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPII--LIGTKLDLRD 124
+ L YRGA +L + + R ++ N+ W E+ Y+ + L+G K+D
Sbjct: 74 FRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRES 133
Query: 125 DKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDA-AIKVV 177
++ ++ A+ +EL +++ECS++T++NV+ F+ A+K++
Sbjct: 134 ERGVSREEGIALA------KELN-----CMFLECSARTRQNVEQCFEELALKIM 176
>AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G |
chr3:5069239-5070025 FORWARD LENGTH=217
Length = 217
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQE
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLRDD 125
Y + YRGA LL + + ++ENV ++W+ ELR H + I+L+G K DLR
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTEANIVIMLVGNKADLR-- 131
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
H AV A+ R+ ++E S+ NV+ F
Sbjct: 132 ------HLRAVSTEDAKAFAERE---NTFFMETSALEALNVENAF 167
>AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homolog
A4C | chr5:19421533-19422473 REVERSE LENGTH=223
Length = 223
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ +L ++ N F + T+ F + +D T+ +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQER 76
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDL--- 122
Y + YRGA +L + + R S+++VA +W+ ELR H + I+LIG K DL
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDITKRQSFDHVA-RWLEELRGHADKNIVIMLIGNKTDLGTL 135
Query: 123 -----RDDKQFFQ 130
D K+F Q
Sbjct: 136 RAVPTEDAKEFAQ 148
>AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C |
chr5:18559318-18560639 FORWARD LENGTH=216
Length = 216
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E Y + YRGA LL + + +++ENV + W+ ELR H P + ++L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ETWLKELRNHTDPNIVVMLVGNKSDLR 131
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
H AV A+ ++ + ++E S+ NV+ F
Sbjct: 132 --------HLVAVQTEDAKSFAEKESL---YFMETSALEATNVENAF 167
>AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F |
chr5:24484750-24485565 FORWARD LENGTH=217
Length = 217
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E Y + YRGA LL + + ++ENV ++W+ ELR H + I+ +G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMFVGNKADLR 131
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
H AV A+ R+ ++E S+ NV+ F
Sbjct: 132 --------HLRAVSTEDAKAFAERE---NTFFMETSALESMNVENAF 167
>AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A |
chr5:26083437-26084550 FORWARD LENGTH=226
Length = 226
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ +L Y + F D T+ F + +V+D +V +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQER 78
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLRDD 125
Y + YRGA +L + + R +++++ +W+ ELR H + IILIG K DL D
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDITRRQTFDHIP-RWLEELRAHADKNIVIILIGNKSDLVDQ 137
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ A+P T +E + G ++E S+ NV++ F
Sbjct: 138 R--------AIP--TEDAKEFAEKEGL-FFLETSAFNATNVESAF 171
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB
GTPase homolog A4B | chr4:18542722-18543779 FORWARD
LENGTH=224
Length = 224
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ +L + + F D T+ F + ++ ++ +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQER 78
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLRDD 125
Y + YRGA +L + + R ++E++ +W+ ELR H + IILIG K DL D
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDMTKRETFEHIP-RWLEELRAHADKNIVIILIGNKSDLEDQ 137
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFD 171
+ AVP T +E + G ++E S+ NV+ F+
Sbjct: 138 R--------AVP--TEDAKEFAEKEGL-FFLETSALNATNVENSFN 172
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase
homolog A2D | chr5:23876858-23878244 FORWARD LENGTH=217
Length = 217
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGKT +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGTKLDLR 123
E Y + YRGA LL + + R +++NV +W+ ELR +A + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMAGNKADL- 129
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAI 174
+H +V G+ L + G ++E S+ NV+ F +
Sbjct: 130 -------NHLRSVA--EEDGQTLAETEGLS-FLETSALEATNVEKAFQTVL 170
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
P-loop containing nucleoside triphosphate hydrolases
superfamily protein | chr2:17929899-17930904 REVERSE
LENGTH=214
Length = 214
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F + T+ F + ++++DG V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E + + YRGA L+ + + +++ENV +W+ EL H V +LIG K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDITRSSTFENVG-RWLDELNTHSDTTVAKMLIGNKCDL- 129
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVV 177
+ ++ +G+ L + G ++E S+ NVK F+ I+ +
Sbjct: 130 ---------ESIRAVSVEEGKSLAESEGL-FFMETSALDSTNVKTAFEMVIREI 173
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB
GTPase homolog A1D | chr4:10320156-10321339 REVERSE
LENGTH=214
Length = 214
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+ + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E Y + YRGA LL + + +++ENV ++W+ ELR H P + ++L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLRELRDHTDPNIVVMLVGNKSDLR 131
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB
GTPase homolog A2B | chr1:2276270-2277154 FORWARD
LENGTH=214
Length = 214
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGTKLDL 122
E Y + YRGA LL + + R ++ENV +W+ ELR +A + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENVL-RWLRELRDHADSNIVIMMAGNKSDL 129
>AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D |
chr2:13473781-13474957 REVERSE LENGTH=219
Length = 219
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F T+ F + N+ ++G V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E + + YRGA L+ + + R+++E+V +W+ EL+ H V +L+G K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDISRRSTFESVG-RWLDELKTHSDTTVARMLVGNKCDL- 129
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIK 175
+ ++ +G+ L + G ++E S+ NVK F+ I+
Sbjct: 130 ---------ESIRAVSVEEGKALAETEG-LFFMETSALDSTNVKTAFEMVIR 171
>AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=206
Length = 206
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD VGKT ++ + F T Y T+ D S + T L LWDTAGQE
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQER 68
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLRDD 125
+ L P R + V ++ + + S+ S+ N + KWI E+R V I+L+G K DL +
Sbjct: 69 FKSLVPSYIRDSSVAVIVYDVASKQSFINTS-KWIEEVRAERGSYVIIVLVGNKTDLVNK 127
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+Q ++ +GE + GA +++E S+K N+K +F
Sbjct: 128 RQ----------VSIEEGENKAREFGA-LFMETSAKAGFNIKPLF 161
>AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A |
chr5:19277596-19278366 REVERSE LENGTH=221
Length = 221
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 14/178 (7%)
Query: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWD 60
S K V +GD AVGK+ +L + + F + T+ F + ++G + +WD
Sbjct: 10 SEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWD 69
Query: 61 TAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTK 119
TAGQE + + YRGA LL + + R ++ ++ +W+ EL H V IL+G K
Sbjct: 70 TAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIG-RWLNELHTHSDMNVVTILVGNK 128
Query: 120 LDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVV 177
DL+D ++ ++TA+G+ L + G ++E S+ NV A F+ +K +
Sbjct: 129 SDLKDLRE----------VSTAEGKALAEAQGL-FFMETSALDSSNVAAAFETVVKEI 175
>AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I |
chr1:10036966-10037698 REVERSE LENGTH=218
Length = 218
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V GD VGK+ +L +T N F D T+ F+ ++ D V +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E Y + YRGA LL + + ++ENV ++W+ ELR H + I+L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 131
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB
GTPase homolog A5E | chr1:1748314-1749350 FORWARD
LENGTH=261
Length = 261
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L Y N F + T+ F + ++ ++G V +WDTAGQ
Sbjct: 55 LFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQ 114
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E + + YRGA L+ + + R ++E+V +W+ EL+ H V +L+G K DL
Sbjct: 115 ERFRAVTSAYYRGAVGALVVYDITRRTTFESVG-RWLDELKIHSDTTVARMLVGNKCDLE 173
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAI 174
+ + ++ +G+ L + G ++E S+ NVK F+ I
Sbjct: 174 NIR----------AVSVEEGKALAEEEG-LFFVETSALDSTNVKTAFEMVI 213
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase
homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
Length = 237
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD AVGKT +L +T N F D T+ F + + + G V +WDTAGQE
Sbjct: 30 KVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQER 89
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPII-LIGTKLDL 122
Y + YRGA ++ + + R S+++VA +W+ ELR +A +I L+G K DL
Sbjct: 90 YRAVTSAYYRGALGAMVVYDITKRLSFDHVA-RWVEELRAHADDSAVIMLVGNKADL 145
>AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H |
chr2:14337366-14338251 REVERSE LENGTH=218
Length = 218
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V GD VGK+ +L +T N F D T+ F+ ++ VD V +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDL 122
E Y + YRGA LL + + ++ENV ++W+ ELR H I+L+G K DL
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANTVIMLVGNKADL 130
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C,
RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362
REVERSE LENGTH=217
Length = 217
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V+G T+ +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYA-PGVPIILIGTKLDLR 123
E Y + YRGA LL + + R +++NV +W+ ELR +A + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMAGNKSDL- 129
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+H +V G+ L + G ++E S+ NV+ F
Sbjct: 130 -------NHLRSVA--EEDGQSLAEKEGLS-FLETSALEATNVEKAF 166
>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPase
homolog G3B | chr1:8049247-8050494 FORWARD LENGTH=203
Length = 203
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
MS R +K + +GD VGKT ++ Y +N F Y T+ +F + + +D V L
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPE-LRHYAP----GVP 112
+WDTAGQE + L YRGAD +L + + S+E++ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESL-DNWHNEFLTRASPRDPMAFP 119
Query: 113 IILIGTKLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDA 172
IL+G K+D+ D + ++ + E G VY E S+K NV F
Sbjct: 120 FILLGNKVDI--------DGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLC 171
Query: 173 AIKVVL 178
K+ L
Sbjct: 172 ITKLAL 177
>AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B |
chr3:2372485-2373482 REVERSE LENGTH=217
Length = 217
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ +L ++ + F T+ T+ F +V ++G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGTKLDLR 123
E + + YRGA L+ + + ++E+V K+W+ EL H V +L+G K DL
Sbjct: 72 ERFRAVTSAYYRGAFGALIVYDITRGDTFESV-KRWLQELNTHCDTAVAQMLVGNKCDLE 130
Query: 124 DDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
D + ++ +G+ L + G ++E S+ NV F+ I+ +
Sbjct: 131 DIR----------AVSVEEGKALAEEEG-LFFMETSALDATNVDKAFEIVIREIF 174
>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
RAB GTPase homolog G3F | chr3:6484266-6486005 FORWARD
LENGTH=206
Length = 206
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPE-LRHYAP----GVPIILIGTK 119
E + L YRGAD +L + + S S+EN+ W E L +P P +LIG K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFENL-NNWREEFLIQASPSDPENFPFVLIGNK 126
Query: 120 LDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
+D+ D A ++G P Y E S+K NV+ F K L
Sbjct: 127 VDVDDGNSRVVSEKKAKAWCASKG-------NIP-YFETSAKVGTNVEEAFQCIAKDAL 177
>AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=213
Length = 213
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 21/172 (12%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLW------- 59
K V +GD VGKT ++ + F T Y T+ D S + T L LW
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSLG 68
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELR-HYAPGVPIILIGT 118
DTAGQE + L P R + V ++ + + S+ S+ N + KWI E+R V I+L+G
Sbjct: 69 DTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINTS-KWIEEVRAERGSYVIIVLVGN 127
Query: 119 KLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
K DL + +Q ++ +GE + GA +++E S+K N+K +F
Sbjct: 128 KTDLVNKRQ----------VSIEEGENKAREFGA-LFMETSAKAGFNIKPLF 168
>AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQED 66
++ V VGD GK+ ++++ +++FP + VP V ++ + + + + DT+ + +
Sbjct: 18 VRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTSSRPE 76
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLDLRDDK 126
+ + AD +L ++ + E +++ W+PELR +PII+ G KLD RDD
Sbjct: 77 DRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDFRDDN 136
Query: 127 QFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
PI ++ R++ IECS+ Q + VF A K VL
Sbjct: 137 NQVSLEQVMSPIM----QQFREI---ETCIECSALKQLQAQEVFYYAQKTVL 181
>AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQED 66
++ V VGD GK+ ++++ +++FP + VP V ++ + + + + DT+ + +
Sbjct: 18 VRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTSSRPE 76
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLDLRDDK 126
+ + AD +L ++ + E +++ W+PELR +PII+ G KLD RDD
Sbjct: 77 DRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDFRDDN 136
Query: 127 QFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
PI ++ R++ IECS+ Q + VF A K VL
Sbjct: 137 NQVSLEQVMSPIM----QQFREI---ETCIECSALKQLQAQEVFYYAQKTVL 181
>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988587 REVERSE LENGTH=165
Length = 165
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRH 106
V VDG + L +WDTAGQE + + YRGA LL + + R ++ ++A W+ + R
Sbjct: 2 VTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQ 60
Query: 107 YA-PGVPIILIGTKLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKN 165
+A P + I+LIG K DL H AV + +G++ K G +++E S++T +N
Sbjct: 61 HANPNMSIMLIGNKCDL--------AHKRAV--SKEEGQQFAKEHG-LLFLEASARTAQN 109
Query: 166 VKAVF-DAAIKVV 177
V+ F + A K++
Sbjct: 110 VEEAFIETAAKIL 122
>AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883713-885158 FORWARD
LENGTH=206
Length = 206
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPEL-R 105
V +DG + L +WDTAGQE + + YRGA LL + + +S+ N+ + W+ + +
Sbjct: 47 VELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQ 105
Query: 106 HYAPGVPIILIGTKLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKN 165
H + V IL+G K D+ + K+ AVP TA+G+ L G + E S+KT N
Sbjct: 106 HASDNVNKILVGNKADMDESKR-------AVP--TAKGQALADEYGIK-FFETSAKTNLN 155
Query: 166 VKAVF 170
V+ VF
Sbjct: 156 VENVF 160
>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homolog
7A | chr2:9324899-9326170 REVERSE LENGTH=212
Length = 212
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + + +D +V L +WDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQ 68
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPE-LRHYAP----GVPIILIGTK 119
E + L YRGAD +L + + + S+E + W E L+ P P +LIG K
Sbjct: 69 ERFQSLGAAFYRGADCCVLVYDVNNLKSFETL-NNWHTEFLKQANPMEPETFPFVLIGNK 127
Query: 120 LDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
D+ D + ++ + E G Y E S+K N+ F + + L
Sbjct: 128 TDV--------DGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIAL 178
>AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 |
chr3:23329200-23332692 REVERSE LENGTH=643
Length = 643
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQED 66
++ GD GK+ ++ + S TFP D VP V + + + + DT D
Sbjct: 15 LRVAVAGDKGTGKSSLISAVASETFP-DNVPRVLPPITLPADAFPDYIPITIVDTPSSID 73
Query: 67 YNRLRPLS-YRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLDLRDD 125
NR++ + +R ADV LL ++ ++ + ++ W+PELR P+I++G KLDLRD+
Sbjct: 74 -NRIKLIEEFRKADVVLLTYACDQPSTLDRLSSYWLPELRRLEIKAPVIVVGCKLDLRDE 132
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
+ + PI +E R++ IECS+ T V VF A K VL
Sbjct: 133 RSPARLEDIMSPIM----KEYREI---ETCIECSALTLIQVPDVFYFASKAVL 178
>AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D |
chr1:19468150-19469449 REVERSE LENGTH=206
Length = 206
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
MS+ R +K + +GD VGKT ++ + + F Y T+ +F + V +D L
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPE-LRHYAP----GVP 112
+WDTAGQE + L YRGAD +L + + S++N+ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNL-NNWREEFLIQASPSDPENFP 119
Query: 113 IILIGTKLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDA 172
+++G K D+ K A ++G P Y E S+K NV A F+
Sbjct: 120 FVVLGNKTDVDGGKSRVVSEKKAKAWCASKG-------NIP-YFETSAKEGFNVDAAFEC 171
Query: 173 AIK 175
K
Sbjct: 172 ITK 174
>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase
homolog G3C | chr3:5459270-5460556 FORWARD LENGTH=206
Length = 206
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
M++ R +K + +GD VGKT ++ + + F Y T+ +F + V +D L
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPE-LRHYAP----GVP 112
+WDTAGQE + L YRGAD +L + S+EN+ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENL-NNWREEFLIQASPSDPENFP 119
Query: 113 IILIGTKLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDA 172
+++G K D+ D + +T + + G Y E S+K NV A F+
Sbjct: 120 FVVLGNKTDV--------DGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFEC 171
Query: 173 AIKVVL 178
K L
Sbjct: 172 IAKNAL 177
>AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQED 66
K + +GD VGK+ +L+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPII--LIGTKLDLRD 124
+ L +RG+ +L + + R ++ N+A W E+ Y+ I L+G K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 125 DKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDA-AIKVV 177
+++ ++ +G L K + ++ ECS++T++NV F+ A+K++
Sbjct: 134 ERK----------VSREEGMALAKDLNC-LFHECSARTRENVNGCFEELALKIM 176
>AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQED 66
K + +GD VGK+ +L+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPII--LIGTKLDLRD 124
+ L +RG+ +L + + R ++ N+A W E+ Y+ I L+G K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 125 DKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDA-AIKVV 177
+++ ++ +G L K + ++ ECS++T++NV F+ A+K++
Sbjct: 134 ERK----------VSREEGMALAKDLNC-LFHECSARTRENVNGCFEELALKIM 176
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase
homolog C2B | chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 93/174 (53%), Gaps = 16/174 (9%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQED 66
K + +GD VGK+ +L+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 67 YNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPII--LIGTKLDLRD 124
+ L +RG+ +L + + R ++ N+A W E+ Y+ I L+G K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 125 DKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDA-AIKVV 177
+++ ++ +G L K + ++ ECS++T++NV F+ A+K++
Sbjct: 134 ERK----------VSREEGMALAKDLNC-LFHECSARTRENVNGCFEELALKIM 176
>AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protein 4
| chr5:22351576-22353058 REVERSE LENGTH=222
Length = 222
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K + VGDG GKT L + + F + PT+ D + + + + WDTAGQE
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLDL 122
Y+ L+ Y ++ F + +R +Y N+ +W +LR +PI+L G K+D+
Sbjct: 74 KYSGLKDAYYIHGQCAIIMFDVTARHTYMNI-DRWYRDLRRVCKNIPIVLCGNKVDV 129
>AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=206
Length = 206
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + + + V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPE-LRHYAPG----VPIILIGTK 119
E + L YRGAD L + + S++N+ + W E L+ +P P I++G K
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQASPSDPKTFPFIVLGNK 126
Query: 120 LDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAIKVVL 178
+D+ D ++ ++ + + G Y E S+K NV F K L
Sbjct: 127 IDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTAL 177
>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPE-LRHYAP----GVPIILIGTK 119
E + L YRGAD +L + + S S+E++ W E L +P P ++IG K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFEDL-NNWREEFLIQASPSDPENFPFVVIGNK 126
Query: 120 LDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+D+ D ++ ++ + G Y E S+K NV+ F
Sbjct: 127 IDV--------DGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAF 169
>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPE-LRHYAP----GVPIILIGTK 119
E + L YRGAD +L + + S S+E++ W E L +P P ++IG K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFEDL-NNWREEFLIQASPSDPENFPFVVIGNK 126
Query: 120 LDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+D+ D ++ ++ + G Y E S+K NV+ F
Sbjct: 127 IDV--------DGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAF 169
>AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=211
Length = 211
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + + + V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGV----------PII 114
E + L YRGAD L + + S++N+ + W E A + P I
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQAWNIGMCPSDPKTFPFI 126
Query: 115 LIGTKLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVFDAAI 174
++G K+D+ D ++ ++ + + G Y E S+K NV F
Sbjct: 127 VLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIA 178
Query: 175 KVVL 178
K L
Sbjct: 179 KTAL 182
>AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear
protein 2 | chr5:6762817-6764381 FORWARD LENGTH=221
Length = 221
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLDLRDD 125
+ LR Y ++ F + +R +Y+NV W +L +PI+L G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 Q------VKAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 |
chr5:22392285-22393957 FORWARD LENGTH=221
Length = 221
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLDLRD 124
+ LR Y ++ F + +R +Y+NV W +L +PI+L G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKN 131
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear
protein-1 | chr5:6760364-6761747 FORWARD LENGTH=221
Length = 221
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLDLRDD 125
+ LR Y ++ F + +R +Y+NV W +L +PI+L G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=217
Length = 217
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT ++ Y F Y T+ +F + + + V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGV------------- 111
E + L YRGAD L + + S++N+ + W E A +
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQAWNIGMWTIAEASPSDP 126
Query: 112 ---PIILIGTKLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKA 168
P I++G K+D+ D ++ ++ + + G Y E S+K NV
Sbjct: 127 KTFPFIVLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDE 178
Query: 169 VFDAAIKVVL 178
F K L
Sbjct: 179 AFLTIAKTAL 188
>AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 |
chr5:15864166-15865782 REVERSE LENGTH=204
Length = 204
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVF-DNFSANVVVDGSTVNLGLWDTAGQE 65
+K + +GD VGKT +L Y F + T++ D + + + V L +WDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 66 DYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPE-LRHYAPGV----PIILIGTKL 120
+ L YR D +L + + + ++E++ W E ++ P P +L+G K
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESI-DNWHDEFIKQANPETPTKFPFVLMGNKT 124
Query: 121 DLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
D+ + K P V A ++ G VY E S+K + NV+ F
Sbjct: 125 DVNNGK------PRVVAKEIA--DQWCGSKGNIVYFETSAKAKINVEEAF 166
>AT5G54840.1 | Symbols: ATSGP1, SGP1 | Ras-related small GTP-binding
family protein | chr5:22276611-22278328 REVERSE
LENGTH=288
Length = 288
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 8/164 (4%)
Query: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDY 67
K +GD GKT ++ Y + + T + V G T++ +WD G E
Sbjct: 103 KISLLGDCQTGKTTFVVKYVGDENQSFLEMTGLNLMDKTFYVQGVTISFSIWDVGGDEKR 162
Query: 68 NRLR-PLSYRGADVFLLCFSLISRASYENVAKKWIPELRHYAPGVPIILIGTKLDLRDDK 126
++ P++ + A L F L SR++ +V W + R + ILIGTK D
Sbjct: 163 SKDHIPIACKDAVAILFMFDLTSRSTLNSVF-GWYSQARKWNKTAIPILIGTKFD----- 216
Query: 127 QFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKAVF 170
F + P Q K++ A ++ S+ NV +F
Sbjct: 217 DFVRLPPNLQWTIVTQARAYAKVMNASLFFS-SATHNINVNKIF 259
>AT4G09720.2 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133405-6134959 FORWARD LENGTH=172
Length = 172
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVFLLCFSLISRASYENVAKKWIPE-LRHYAPG-- 110
V L +WDTAGQE + L YRGAD L + + S++N+ + W E L+ +P
Sbjct: 23 VTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQASPSDP 81
Query: 111 --VPIILIGTKLDLRDDKQFFQDHPAAVPITTAQGEELRKLIGAPVYIECSSKTQKNVKA 168
P I++G K+D+ D ++ ++ + + G Y E S+K NV
Sbjct: 82 KTFPFIVLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDE 133
Query: 169 VFDAAIKVVL 178
F K L
Sbjct: 134 AFLTIAKTAL 143