Miyakogusa Predicted Gene

Lj3g3v3409070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3409070.1 tr|B7G7I3|B7G7I3_PHATC Predicted protein
OS=Phaeodactylum tricornutum (strain CCAP 1055/1)
GN=PHATRD,33.93,8e-18,NicO,Nickel/cobalt transporter, high-affinity;
seg,NULL,CUFF.45799.1
         (366 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16800.1 | Symbols:  | high-affinity nickel-transport family ...   335   4e-92
AT4G35080.1 | Symbols:  | high-affinity nickel-transport family ...   318   5e-87
AT4G35080.3 | Symbols:  | high-affinity nickel-transport family ...   314   6e-86
AT4G35080.2 | Symbols:  | high-affinity nickel-transport family ...   254   9e-68

>AT2G16800.1 | Symbols:  | high-affinity nickel-transport family
           protein | chr2:7285824-7287188 FORWARD LENGTH=372
          Length = 372

 Score =  335 bits (858), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 191/318 (60%), Positives = 217/318 (68%), Gaps = 32/318 (10%)

Query: 68  LEDSSDAHIPKSQPLNQITDGDSKNP-------------KAITARTFVLLSALVMLLIXX 114
           L  SS+  I  SQ     TD    NP             K I+A   +L+SA+  LL+  
Sbjct: 68  LNQSSNFLIASSQ-----TDASKPNPGFIQRIVSSFEQRKTISAGMVILVSAIAALLLNP 122

Query: 115 XXXXXXXXXXXXXXKTGGPA-----LIRNELVSSAWTGFFAGCLHTLSGPDHLAALAPLS 169
                          +GG A     L+R E+++SAWTGFFAGCLHTLSGPDHLAALAPLS
Sbjct: 123 ILVPPAFASFQTATNSGGAAVVGGKLLRTEVLTSAWTGFFAGCLHTLSGPDHLAALAPLS 182

Query: 170 IGRTRMESAAVGALWGCGHDAGQVIFGLIFLLLKDRLHIEIIQTWGTRVVGLTLLVIGAM 229
           IGRTRMESAAVGALWGCGHDAGQ+IFGL+FLLLKDRLHIE+I+TWGTRVVGLTLLVIGAM
Sbjct: 183 IGRTRMESAAVGALWGCGHDAGQLIFGLLFLLLKDRLHIEVIRTWGTRVVGLTLLVIGAM 242

Query: 230 GIKEASEVPTPCVA-LENGECDVGVYESLDNPAVGKKKIGFATFATGIVHGLQPDXXXXX 288
           GIKEASE+P PCV  LENGE         D  ++ KKKIGFATFATGIVHGLQPD     
Sbjct: 243 GIKEASEMPEPCVVTLENGET--------DEKSLKKKKIGFATFATGIVHGLQPDALMMV 294

Query: 289 XXXXXXXSRVSGAAFLIMFLLGTVVAMGSYTVFIGSCSEALKDRIPRITEKLTWXXXXXX 348
                  SR++GA+FLIMFL+GTV+AMGSYTVFIGSCSEALK+++PRITEKLTW      
Sbjct: 295 LPALALPSRIAGASFLIMFLIGTVIAMGSYTVFIGSCSEALKEKVPRITEKLTWASSLVA 354

Query: 349 XXXXXXXXXXQFFGFSLY 366
                     QFFGFSLY
Sbjct: 355 IGLGLAIIVSQFFGFSLY 372


>AT4G35080.1 | Symbols:  | high-affinity nickel-transport family
           protein | chr4:16698384-16700012 FORWARD LENGTH=365
          Length = 365

 Score =  318 bits (814), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 173/295 (58%), Positives = 205/295 (69%), Gaps = 9/295 (3%)

Query: 72  SDAHIPKSQPLNQITDGDSKNPKAITARTFVLLSALVMLLIXXXXXXXXXXXXXXXXKTG 131
           SD   P    L +I    S+  K ++  T +L+SA+ +LL+                K+G
Sbjct: 80  SDESKPNPGFLTRIATSASEQRKTLSTGTVILISAVAVLLLNPLLAPPAFASFQTAAKSG 139

Query: 132 GPALIRNELVSSAWTGFFAGCLHTLSGPDHLAALAPLSIGRTRMESAAVGALWGCGHDAG 191
                    ++SAWTGF AGCLHTLSGPDHLAALAPLSIGR++MESAAVGALWGCGHDAG
Sbjct: 140 --------WLTSAWTGFLAGCLHTLSGPDHLAALAPLSIGRSKMESAAVGALWGCGHDAG 191

Query: 192 QVIFGLIFLLLKDRLHIEIIQTWGTRVVGLTLLVIGAMGIKEASEVPTPCVALENGECDV 251
           QVIFGL+FLLLKDRLHIE++QTWGTR+VGLTL++IGAMGIKEASE+P PCVALE  +  +
Sbjct: 192 QVIFGLLFLLLKDRLHIEVLQTWGTRIVGLTLVIIGAMGIKEASEIPEPCVALET-DISM 250

Query: 252 GVYESLDNPAVGKKKIGFATFATGIVHGLQPDXXXXXXXXXXXXSRVSGAAFLIMFLLGT 311
              E    P   KKKIGFATFATG+VHGLQPD            SR++G+AFLIMFL+GT
Sbjct: 251 VSTEKEALPLPKKKKIGFATFATGVVHGLQPDALMIVLPALALPSRLAGSAFLIMFLVGT 310

Query: 312 VVAMGSYTVFIGSCSEALKDRIPRITEKLTWXXXXXXXXXXXXXXXXQFFGFSLY 366
           V+AMGSYT FIGSCSEALK+++PRITEKLTW                 FFGFSLY
Sbjct: 311 VIAMGSYTAFIGSCSEALKEKVPRITEKLTWVSSLVAIGLGLGIVISPFFGFSLY 365


>AT4G35080.3 | Symbols:  | high-affinity nickel-transport family
           protein | chr4:16698384-16700012 FORWARD LENGTH=389
          Length = 389

 Score =  314 bits (805), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 159/226 (70%), Positives = 179/226 (79%), Gaps = 1/226 (0%)

Query: 141 VSSAWTGFFAGCLHTLSGPDHLAALAPLSIGRTRMESAAVGALWGCGHDAGQVIFGLIFL 200
           ++SAWTGF AGCLHTLSGPDHLAALAPLSIGR++MESAAVGALWGCGHDAGQVIFGL+FL
Sbjct: 165 LTSAWTGFLAGCLHTLSGPDHLAALAPLSIGRSKMESAAVGALWGCGHDAGQVIFGLLFL 224

Query: 201 LLKDRLHIEIIQTWGTRVVGLTLLVIGAMGIKEASEVPTPCVALENGECDVGVYESLDNP 260
           LLKDRLHIE++QTWGTR+VGLTL++IGAMGIKEASE+P PCVALE     V   E    P
Sbjct: 225 LLKDRLHIEVLQTWGTRIVGLTLVIIGAMGIKEASEIPEPCVALETDISMVST-EKEALP 283

Query: 261 AVGKKKIGFATFATGIVHGLQPDXXXXXXXXXXXXSRVSGAAFLIMFLLGTVVAMGSYTV 320
              KKKIGFATFATG+VHGLQPD            SR++G+AFLIMFL+GTV+AMGSYT 
Sbjct: 284 LPKKKKIGFATFATGVVHGLQPDALMIVLPALALPSRLAGSAFLIMFLVGTVIAMGSYTA 343

Query: 321 FIGSCSEALKDRIPRITEKLTWXXXXXXXXXXXXXXXXQFFGFSLY 366
           FIGSCSEALK+++PRITEKLTW                 FFGFSLY
Sbjct: 344 FIGSCSEALKEKVPRITEKLTWVSSLVAIGLGLGIVISPFFGFSLY 389


>AT4G35080.2 | Symbols:  | high-affinity nickel-transport family
           protein | chr4:16698384-16700012 FORWARD LENGTH=336
          Length = 336

 Score =  254 bits (648), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 150/295 (50%), Positives = 177/295 (60%), Gaps = 38/295 (12%)

Query: 72  SDAHIPKSQPLNQITDGDSKNPKAITARTFVLLSALVMLLIXXXXXXXXXXXXXXXXKTG 131
           SD   P    L +I    S+  K ++  T +L+SA+ +LL+                K+G
Sbjct: 80  SDESKPNPGFLTRIATSASEQRKTLSTGTVILISAVAVLLLNPLLAPPAFASFQTAAKSG 139

Query: 132 GPALIRNELVSSAWTGFFAGCLHTLSGPDHLAALAPLSIGRTRMESAAVGALWGCGHDAG 191
                    ++SAWTGF AGCLHTLSGPDHLAALAPLSIGR++MESAAVGALWGCGHDAG
Sbjct: 140 --------WLTSAWTGFLAGCLHTLSGPDHLAALAPLSIGRSKMESAAVGALWGCGHDAG 191

Query: 192 QVIFGLIFLLLKDRLHIEIIQTWGTRVVGLTLLVIGAMGIKEASEVPTPCVALENGECDV 251
           QVIFGL+FLLLKDRLHIE++QTWGTR+VGLTL++IGAMGIKEASE+P PCVALE  +  +
Sbjct: 192 QVIFGLLFLLLKDRLHIEVLQTWGTRIVGLTLVIIGAMGIKEASEIPEPCVALET-DISM 250

Query: 252 GVYESLDNPAVGKKKIGFATFATGIVHGLQPDXXXXXXXXXXXXSRVSGAAFLIMFLLGT 311
              E    P   KKKIGFATFATG+VHGLQPD            SR              
Sbjct: 251 VSTEKEALPLPKKKKIGFATFATGVVHGLQPDALMIVLPALALPSR-------------- 296

Query: 312 VVAMGSYTVFIGSCSEALKDRIPRITEKLTWXXXXXXXXXXXXXXXXQFFGFSLY 366
                          EALK+++PRITEKLTW                 FFGFSLY
Sbjct: 297 ---------------EALKEKVPRITEKLTWVSSLVAIGLGLGIVISPFFGFSLY 336