Miyakogusa Predicted Gene
- Lj3g3v3386880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v3386880.1 Non Chatacterized Hit- tr|G7JJX3|G7JJX3_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,100,0,ATP-synt_C,ATPase, F0/V0 complex, subunit C;
ATPase_F0/V0_c,ATPase, F0/V0 complex, subunit C; VACATP,CUFF.45798.1
(164 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34720.1 | Symbols: AVA-P1, VHA-C1, ATVHA-C1 | ATPase, F0/V0 ... 220 4e-58
AT4G38920.1 | Symbols: AVA-P3, ATVHA-C3, VHA-C3 | vacuolar-type ... 220 4e-58
AT2G16510.1 | Symbols: | ATPase, F0/V0 complex, subunit C prote... 220 4e-58
AT1G19910.1 | Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | ATPase, F0/V0... 218 1e-57
AT1G75630.1 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kD... 218 1e-57
AT1G75630.2 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kD... 201 2e-52
AT2G25610.1 | Symbols: | ATPase, F0/V0 complex, subunit C prote... 55 2e-08
AT4G32530.1 | Symbols: | ATPase, F0/V0 complex, subunit C prote... 55 2e-08
>AT4G34720.1 | Symbols: AVA-P1, VHA-C1, ATVHA-C1 | ATPase, F0/V0
complex, subunit C protein | chr4:16568223-16569165
REVERSE LENGTH=164
Length = 164
Score = 220 bits (560), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 121/164 (73%)
Query: 1 MAPFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
M+ FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1 MSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
Query: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGV
Sbjct: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120
Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
RANAQQPKLFVGM YGLIVGIILSSRAGQSRAE
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
>AT4G38920.1 | Symbols: AVA-P3, ATVHA-C3, VHA-C3 | vacuolar-type
H(+)-ATPase C3 | chr4:18147330-18148853 FORWARD
LENGTH=164
Length = 164
Score = 220 bits (560), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 121/164 (73%)
Query: 1 MAPFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
M+ FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1 MSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
Query: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGV
Sbjct: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120
Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
RANAQQPKLFVGM YGLIVGIILSSRAGQSRAE
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
>AT2G16510.1 | Symbols: | ATPase, F0/V0 complex, subunit C protein
| chr2:7160007-7160811 REVERSE LENGTH=164
Length = 164
Score = 220 bits (560), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 121/164 (73%)
Query: 1 MAPFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
M+ FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 1 MSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 60
Query: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGV 120
AGVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGV
Sbjct: 61 AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 120
Query: 121 RANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
RANAQQPKLFVGM YGLIVGIILSSRAGQSRAE
Sbjct: 121 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164
>AT1G19910.1 | Symbols: AVA-P2, AVA-2PE, ATVHA-C2 | ATPase, F0/V0
complex, subunit C protein | chr1:6913317-6914322
FORWARD LENGTH=165
Length = 165
Score = 218 bits (556), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/163 (73%), Positives = 120/163 (73%)
Query: 2 APFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61
+ FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 3 STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 62
Query: 62 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 121
GVLGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVR
Sbjct: 63 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122
Query: 122 ANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
ANAQQPKLFVGM YGLIVGIILSSRAGQSRAE
Sbjct: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
>AT1G75630.1 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kDa
proteolipid subunit 4 | chr1:28400662-28402032 FORWARD
LENGTH=166
Length = 166
Score = 218 bits (556), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/161 (73%), Positives = 119/161 (73%)
Query: 4 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 63
FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV
Sbjct: 6 FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 65
Query: 64 LGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRAN 123
LGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVRAN
Sbjct: 66 LGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRAN 125
Query: 124 AQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAE 164
AQQPKLFVGM YGLIVGIILSSRAGQSRAE
Sbjct: 126 AQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166
>AT1G75630.2 | Symbols: AVA-P4 | vacuolar H+-pumping ATPase 16 kDa
proteolipid subunit 4 | chr1:28400662-28402032 FORWARD
LENGTH=200
Length = 200
Score = 201 bits (511), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 119/195 (61%), Gaps = 34/195 (17%)
Query: 4 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 63
FSGDETAP SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV
Sbjct: 6 FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGV 65
Query: 64 LGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR-- 121
LGIYGLIIAVIISTGINPKAKSYYLFDGY MAIGIVGDAGVR
Sbjct: 66 LGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRVV 125
Query: 122 --------------------------------ANAQQPKLFVGMXXXXXXXXXXXXYGLI 149
ANAQQPKLFVGM YGLI
Sbjct: 126 DCNPDSKIKIYSFTTSFLSNLSQKELFIDLLSANAQQPKLFVGMILILIFAEALALYGLI 185
Query: 150 VGIILSSRAGQSRAE 164
VGIILSSRAGQSRAE
Sbjct: 186 VGIILSSRAGQSRAE 200
>AT2G25610.1 | Symbols: | ATPase, F0/V0 complex, subunit C protein
| chr2:10901585-10902494 REVERSE LENGTH=178
Length = 178
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 25 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGIN--PK 82
S +GAA+G +G + + P + K+++ V+ + IYG+I+A+I+ T + P
Sbjct: 35 SVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPS 94
Query: 83 AKSY---YLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXX 139
+K Y L GY + +GI+G + ++AQ LFV +
Sbjct: 95 SKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIF 154
Query: 140 XXXXXXYGLIVGIILSSRA 158
+G+IVGII+S++A
Sbjct: 155 GSALGLFGVIVGIIMSAQA 173
>AT4G32530.1 | Symbols: | ATPase, F0/V0 complex, subunit C protein
| chr4:15693399-15694958 REVERSE LENGTH=180
Length = 180
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 25 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGIN--PK 82
S +GAA+G +G + + P + K+++ V+ + IYG+I+A+I+ T + P
Sbjct: 37 SVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPS 96
Query: 83 AKSY---YLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXX 139
+K Y L GY + +GI+G + ++AQ LFV +
Sbjct: 97 SKMYDAESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIF 156
Query: 140 XXXXXXYGLIVGIILSSRA 158
+G+IVGII+S++A
Sbjct: 157 GSALGLFGVIVGIIMSAQA 175