Miyakogusa Predicted Gene

Lj3g3v3386760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3386760.1 tr|Q2PEQ1|Q2PEQ1_TRIPR Arginine decarboxylase
OS=Trifolium pratense PE=2 SV=1,79.32,0,ARGININE
DECARBOXYLASE,Arginine decarboxylase;
ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE,NULL,CUFF.45779.1
         (710 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16500.1 | Symbols: ADC1, ARGDC1, ARGDC, SPE1 | arginine deca...   937   0.0  
AT4G34710.2 | Symbols: ADC2, SPE2, ATADC2 | arginine decarboxyla...   933   0.0  
AT4G34710.1 | Symbols: ADC2, SPE2, ATADC2 | arginine decarboxyla...   933   0.0  

>AT2G16500.1 | Symbols: ADC1, ARGDC1, ARGDC, SPE1 | arginine
           decarboxylase 1 | chr2:7150796-7152904 REVERSE
           LENGTH=702
          Length = 702

 Score =  937 bits (2423), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/657 (70%), Positives = 535/657 (81%), Gaps = 23/657 (3%)

Query: 40  WSPSLSSKLYRIDAWGGPYFTVNSAGNVSVRPHGAATLAHQEIDLLKVVKKASDPKCCGG 99
           WSPSLSS LYRID WG PYF  NS+GN+SVRPHG+ TL HQ+IDL+KVVKK +DP    G
Sbjct: 34  WSPSLSSSLYRIDGWGAPYFAANSSGNISVRPHGSNTLPHQDIDLMKVVKKVTDPS---G 90

Query: 100 LGLQLPLVIRFPDALKNRVESLQSAFDCAIQSQGYESSYQGVFPVKCNQDRFVVEDIVKF 159
           LGLQLPL++RFPD LKNR+E LQSAFD AIQSQGY+S YQGV+PVKCNQDRF++EDIV+F
Sbjct: 91  LGLQLPLIVRFPDVLKNRLECLQSAFDYAIQSQGYDSHYQGVYPVKCNQDRFIIEDIVEF 150

Query: 160 GSSFRFGLEAGSKPELLLAMSCLCKGNREAFLVCNGFKDREYITLALVARKLELNTVIVL 219
           GS FRFGLEAGSKPE+LLAMSCLCKGN EAFLVCNGFKD EYI+LAL  RKLELNTVIVL
Sbjct: 151 GSGFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFKDSEYISLALFGRKLELNTVIVL 210

Query: 220 EQEEELDIVIEVSNKLCIRPVIGVRAKLRTKHSGHFGGTSGDKGKFGLTTTQILRVVKKL 279
           EQEEELD+VI++S K+ +RPVIG+RAKLRTKHSGHFG TSG+KGKFGLTT QILRVV+KL
Sbjct: 211 EQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTVQILRVVRKL 270

Query: 280 EQVGMLDCLQLLHFHIGSQIPHTALLSDGVGEAAQIYCELLRLGAQMRVXXXXXXXXXXX 339
            QVGMLDCLQLLHFHIGSQIP TALLSDGV EAAQ+YCEL+RLGA M+V           
Sbjct: 271 SQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDY 330

Query: 340 XXSKSTDSDISVGYSLEEYAAAVVHTVKNVCDSRNVRHPVICSESGRAIVSHHSVLIFEA 399
             SKS +SD+SV YSLEEYAAAVV +V+ VCD ++V+HPVICSESGRAIVSHHSVLIFEA
Sbjct: 331 DGSKSGESDLSVAYSLEEYAAAVVASVRFVCDQKSVKHPVICSESGRAIVSHHSVLIFEA 390

Query: 400 VGASGNRGRDSALSTIELQCLGEGLSEEALADYQNMSSATIRGEYETCLRYAEQFKKRCV 459
           V A    G+     T + Q + EG SEE   DY+N+  A +RG+ E+CL Y +Q K+RCV
Sbjct: 391 VSA----GQQHETPT-DHQFMLEGYSEEVRGDYENLYGAAMRGDRESCLLYVDQLKQRCV 445

Query: 460 EQFKQGSLGMEQLAAVDGLCDLITEAIGVNDPVQKYHMNLSVFTSIPDFWAFEQLFPIVP 519
           E FK+GSLG+EQLA VDGLC+ + +AIG +DPV  YH+NLSVFTSIPDFW  +QLFPIVP
Sbjct: 446 EGFKEGSLGIEQLAGVDGLCEWVIKAIGASDPVLTYHVNLSVFTSIPDFWGIDQLFPIVP 505

Query: 520 IHRLDEKPTAKGILSDLTCDSDGKIDKFIGGESSLPLHELED-----GHYYLGMFLGGAY 574
           IH+LD++P A+GILSDLTCDSDGKI+KFIGGESSLPLHE+++     G YYLGMFLGGAY
Sbjct: 506 IHKLDQRPAARGILSDLTCDSDGKINKFIGGESSLPLHEMDNNGCSGGRYYLGMFLGGAY 565

Query: 575 EEALGGVHNLFGGPSVVRVVQSDGPHGFAVTRAVAGPSCGDVLRAMQHQPELMFETLKHR 634
           EEALGGVHNLFGGPSVVRV+QSDGPHGFAVTRAV G S  DVLRAMQH+PELMF+TLKHR
Sbjct: 566 EEALGGVHNLFGGPSVVRVLQSDGPHGFAVTRAVMGQSSADVLRAMQHEPELMFQTLKHR 625

Query: 635 VLEFDQ-------DEVNAAAVVAS-LARSFDKMPYLV--AAKPCCFNAVSNGGFYHC 681
             E          D+ N   VVAS LA+SF+ MPYL    +      AV+N G Y+C
Sbjct: 626 AEEPRNNNNKACGDKGNDKLVVASCLAKSFNNMPYLSMETSTNALTAAVNNLGVYYC 682


>AT4G34710.2 | Symbols: ADC2, SPE2, ATADC2 | arginine decarboxylase
           2 | chr4:16560315-16562450 REVERSE LENGTH=711
          Length = 711

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/705 (66%), Positives = 546/705 (77%), Gaps = 28/705 (3%)

Query: 1   MPAMACGAAVLPLPGYTLAGDTDTSXXXXXXXTFSAD---DTWSPSLSSKLYRIDAWGGP 57
           MPA+AC       P Y  + DT            SA    D WSPSLSS LYRID WG P
Sbjct: 1   MPALACVDTSFVPPAYAFS-DTAGDVFIPASSPTSAAVVVDRWSPSLSSSLYRIDGWGAP 59

Query: 58  YFTVNSAGNVSVRPHGAATLAHQEIDLLKVVKKASDPKCCGGLGLQLPLVIRFPDALKNR 117
           YF  NS+GN+SVRPHG+ TL HQ+IDLLK+VKK + PK  GGLGLQLPL++RFPD LKNR
Sbjct: 60  YFIANSSGNISVRPHGSETLPHQDIDLLKIVKKVTGPKSSGGLGLQLPLIVRFPDVLKNR 119

Query: 118 VESLQSAFDCAIQSQGYESSYQGVFPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPELLL 177
           +E LQSAFD AI+SQGY+S YQGV+PVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPE+LL
Sbjct: 120 LECLQSAFDYAIKSQGYDSHYQGVYPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPEILL 179

Query: 178 AMSCLCKGNREAFLVCNGFKDREYITLALVARKLELNTVIVLEQEEELDIVIEVSNKLCI 237
           AMSCLCKG+ +AFLVCNGFKD EYI+LAL+ RKL LNTVIVLEQEEELD+VIE+S K+ +
Sbjct: 180 AMSCLCKGSPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNV 239

Query: 238 RPVIGVRAKLRTKHSGHFGGTSGDKGKFGLTTTQILRVVKKLEQVGMLDCLQLLHFHIGS 297
           RPVIG+RAKLRTKHSGHFG TSG+KGKFGLTTTQI+RVV+KL Q GMLDCLQLLHFHIGS
Sbjct: 240 RPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQIVRVVRKLRQSGMLDCLQLLHFHIGS 299

Query: 298 QIPHTALLSDGVGEAAQIYCELLRLGAQMRVXXXXXXXXXXXXXSKSTDSDISVGYSLEE 357
           QIP T+LLSDGV EAAQ+YCEL+RLGA M+V             SKS +SD+SV YSLEE
Sbjct: 300 QIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEE 359

Query: 358 YAAAVVHTVKNVCDSRNVRHPVICSESGRAIVSHHSVLIFEAVGASGNRGRDSALSTIEL 417
           YA AVV +V+ VCD  +V+HPVICSESGRAIVSHHSVLIFEAV  S ++      +  ++
Sbjct: 360 YAEAVVASVRVVCDRSSVKHPVICSESGRAIVSHHSVLIFEAV--SADKPMVHQATPGDI 417

Query: 418 QCLGEGLSEEALADYQNMSSATIRGEYETCLRYAEQFKKRCVEQFKQGSLGMEQLAAVDG 477
           Q L EG +EEA A+Y+++ +A +RG++E+CL Y +Q K+RCVE FK+G L +EQLA+VDG
Sbjct: 418 QFLLEG-NEEARANYEDLYAAVMRGDHESCLLYVDQLKQRCVEGFKEGVLSIEQLASVDG 476

Query: 478 LCDLITEAIGVNDPVQKYHMNLSVFTSIPDFWAFEQLFPIVPIHRLDEKPTAKGILSDLT 537
           LC+ + +AIG +DPV  Y++NLSVFTSIPD W  +QLFPIVPIH+LD++P A+GILSDLT
Sbjct: 477 LCEWVLKAIGASDPVHTYNINLSVFTSIPDLWGIDQLFPIVPIHKLDQRPGARGILSDLT 536

Query: 538 CDSDGKIDKFIGGESSLPLHELED----GHYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 593
           CDSDGKI+KFIGGESSLPLHEL+     G Y+LGMFLGGAYEEALGGVHNLFGGPSVVRV
Sbjct: 537 CDSDGKINKFIGGESSLPLHELDKNGSGGRYFLGMFLGGAYEEALGGVHNLFGGPSVVRV 596

Query: 594 VQSDGPHGFAVTRAVAGPSCGDVLRAMQHQPELMFETLKHRVLEFDQDE----------- 642
            QSDGPH FAVTRAV G S  DVLRAMQH+PELMF+TLKHR  E    +           
Sbjct: 597 SQSDGPHSFAVTRAVPGQSSADVLRAMQHEPELMFQTLKHRAEEMMHTKGGSEGENEEEE 656

Query: 643 --VNAAAVVASLARSFDKMPYLVAAKPCCFN----AVSNGGFYHC 681
                  V ASL RSF  MPYL   +    N    A+SN GFY+C
Sbjct: 657 EDDEFNNVAASLDRSFHNMPYLATEQASPSNSLSAAISNLGFYYC 701


>AT4G34710.1 | Symbols: ADC2, SPE2, ATADC2 | arginine decarboxylase
           2 | chr4:16560315-16562450 REVERSE LENGTH=711
          Length = 711

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/705 (66%), Positives = 546/705 (77%), Gaps = 28/705 (3%)

Query: 1   MPAMACGAAVLPLPGYTLAGDTDTSXXXXXXXTFSAD---DTWSPSLSSKLYRIDAWGGP 57
           MPA+AC       P Y  + DT            SA    D WSPSLSS LYRID WG P
Sbjct: 1   MPALACVDTSFVPPAYAFS-DTAGDVFIPASSPTSAAVVVDRWSPSLSSSLYRIDGWGAP 59

Query: 58  YFTVNSAGNVSVRPHGAATLAHQEIDLLKVVKKASDPKCCGGLGLQLPLVIRFPDALKNR 117
           YF  NS+GN+SVRPHG+ TL HQ+IDLLK+VKK + PK  GGLGLQLPL++RFPD LKNR
Sbjct: 60  YFIANSSGNISVRPHGSETLPHQDIDLLKIVKKVTGPKSSGGLGLQLPLIVRFPDVLKNR 119

Query: 118 VESLQSAFDCAIQSQGYESSYQGVFPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPELLL 177
           +E LQSAFD AI+SQGY+S YQGV+PVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPE+LL
Sbjct: 120 LECLQSAFDYAIKSQGYDSHYQGVYPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPEILL 179

Query: 178 AMSCLCKGNREAFLVCNGFKDREYITLALVARKLELNTVIVLEQEEELDIVIEVSNKLCI 237
           AMSCLCKG+ +AFLVCNGFKD EYI+LAL+ RKL LNTVIVLEQEEELD+VIE+S K+ +
Sbjct: 180 AMSCLCKGSPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNV 239

Query: 238 RPVIGVRAKLRTKHSGHFGGTSGDKGKFGLTTTQILRVVKKLEQVGMLDCLQLLHFHIGS 297
           RPVIG+RAKLRTKHSGHFG TSG+KGKFGLTTTQI+RVV+KL Q GMLDCLQLLHFHIGS
Sbjct: 240 RPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQIVRVVRKLRQSGMLDCLQLLHFHIGS 299

Query: 298 QIPHTALLSDGVGEAAQIYCELLRLGAQMRVXXXXXXXXXXXXXSKSTDSDISVGYSLEE 357
           QIP T+LLSDGV EAAQ+YCEL+RLGA M+V             SKS +SD+SV YSLEE
Sbjct: 300 QIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEE 359

Query: 358 YAAAVVHTVKNVCDSRNVRHPVICSESGRAIVSHHSVLIFEAVGASGNRGRDSALSTIEL 417
           YA AVV +V+ VCD  +V+HPVICSESGRAIVSHHSVLIFEAV  S ++      +  ++
Sbjct: 360 YAEAVVASVRVVCDRSSVKHPVICSESGRAIVSHHSVLIFEAV--SADKPMVHQATPGDI 417

Query: 418 QCLGEGLSEEALADYQNMSSATIRGEYETCLRYAEQFKKRCVEQFKQGSLGMEQLAAVDG 477
           Q L EG +EEA A+Y+++ +A +RG++E+CL Y +Q K+RCVE FK+G L +EQLA+VDG
Sbjct: 418 QFLLEG-NEEARANYEDLYAAVMRGDHESCLLYVDQLKQRCVEGFKEGVLSIEQLASVDG 476

Query: 478 LCDLITEAIGVNDPVQKYHMNLSVFTSIPDFWAFEQLFPIVPIHRLDEKPTAKGILSDLT 537
           LC+ + +AIG +DPV  Y++NLSVFTSIPD W  +QLFPIVPIH+LD++P A+GILSDLT
Sbjct: 477 LCEWVLKAIGASDPVHTYNINLSVFTSIPDLWGIDQLFPIVPIHKLDQRPGARGILSDLT 536

Query: 538 CDSDGKIDKFIGGESSLPLHELED----GHYYLGMFLGGAYEEALGGVHNLFGGPSVVRV 593
           CDSDGKI+KFIGGESSLPLHEL+     G Y+LGMFLGGAYEEALGGVHNLFGGPSVVRV
Sbjct: 537 CDSDGKINKFIGGESSLPLHELDKNGSGGRYFLGMFLGGAYEEALGGVHNLFGGPSVVRV 596

Query: 594 VQSDGPHGFAVTRAVAGPSCGDVLRAMQHQPELMFETLKHRVLEFDQDE----------- 642
            QSDGPH FAVTRAV G S  DVLRAMQH+PELMF+TLKHR  E    +           
Sbjct: 597 SQSDGPHSFAVTRAVPGQSSADVLRAMQHEPELMFQTLKHRAEEMMHTKGGSEGENEEEE 656

Query: 643 --VNAAAVVASLARSFDKMPYLVAAKPCCFN----AVSNGGFYHC 681
                  V ASL RSF  MPYL   +    N    A+SN GFY+C
Sbjct: 657 EDDEFNNVAASLDRSFHNMPYLATEQASPSNSLSAAISNLGFYYC 701